<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-12-01 10:23:02"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E324084" ref_strand="+" ref_description="SGN-E324084 [cTOC-3-K16]">
      <seq>ataattttccattaggaaacatggaatgcaggatatagagtggaaggcttcttttgtctgatttattttagttgtcgttgattcttttttcctgctctattgttccttcgtgtgttttattcaaatgtgttttttcttgatatttttgttatatatccctattattctttatgtgttctaacctagttcaagtatccgactttggtatgttttatggatgtggtgatgttttattgatatgatttggtacaacatatcaagccttttttcatctattaaaattgtcactgccttgttttagtttaggttttttcattgtgagaagtattgtcacataacagtggtgatacgggagagtacttgatatgaagcagcgatgttgagatcagatatccaactttattattattattttgatcccgtatgagtatttctgttatatctaatcattgagataaatttataagagtaaaagtgacttactttgtaggtaaattatgagttttcatggtatcaaaagggagcgagtgactccttgga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="-" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="21162" stop="20023"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20862" g_stop="20323" g_length="540"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="540" r_length="540" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="-" ref_id="SGN-E324084" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>540</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E324084" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20862" e_stop="20323"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATAATTTTCCATTAGGAAACATGGAATGCAGGATATAGAGTGGAAGGCTTCTTTTGTCTGATTTATTTTAGTTGTCGTTGATTCTTTTTTCCTGCTCTATTGTTCCTTCGTGTGTTTTATTCAAATGTGTTTTTTCTTGATATTTTTGTTATATATCCCTATTATTCTTTATGTGTTCTAACCTAGTTCAAGTATCCGACTTTGGTATGTTTTATGGATGTGGTGATGTTTTATTGATATGATTTGGTACAACATATCAAGCCTTTTTTCATCTATTAAAATTGTCACTGCCTTGTTTTAGTTTAGGTTTTTTCATTGTGAGAAGTATTGTCACATAACAGTGGTGATACGGGAGAGTACTTGATATGAAGCAGCGATGTTGAGATCAGATATCCAACTTTATTATTATTATTTTGATCCCGTATGAGTATTTCTGTTATATCTAATCATTGAGATAAATTTATAAGAGTAAAAGTGACTTACTTTGTAGGTAAATTATGAGTTTTCATGGTATCAAAAGGGAGCGAGTGACTCCTTGGA</genome_strand>
        <mrna_strand>ATAATTTTCCATTAGGAAACATGGAATGCAGGATATAGAGTGGAAGGCTTCTTTTGTCTGATTTATTTTAGTTGTCGTTGATTCTTTTTTCCTGCTCTATTGTTCCTTCGTGTGTTTTATTCAAATGTGTTTTTTCTTGATATTTTTGTTATATATCCCTATTATTCTTTATGTGTTCTAACCTAGTTCAAGTATCCGACTTTGGTATGTTTTATGGATGTGGTGATGTTTTATTGATATGATTTGGTACAACATATCAAGCCTTTTTTCATCTATTAAAATTGTCACTGCCTTGTTTTAGTTTAGGTTTTTTCATTGTGAGAAGTATTGTCACATAACAGTGGTGATACGGGAGAGTACTTGATATGAAGCAGCGATGTTGAGATCAGATATCCAACTTTATTATTATTATTTTGATCCCGTATGAGTATTTCTGTTATATCTAATCATTGAGATAAATTTATAAGAGTAAAAGTGACTTACTTTGTAGGTAAATTATGAGTTTTCATGGTATCAAAAGGGAGCGAGTGACTCCTTGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E324701" ref_strand="+" ref_description="SGN-E324701 [cTOC-8-G10]">
      <seq>aattttccattaggaaacatggaatgcangatatagagtggaaggcttcttttgtctgatttattttagttgtcgttgattcttttttcctgctctattgttccttcgtgtgttttattcaaatgtgttttttcttgatatttttgttatatatccctattattctttatgtgttctaacctagttcaagtatccgactttggtatgttttatggatgtggtgatgttttattgatatgatttggtacaacatatcaagccttttttcatctattaaaattgtcactgccttgttttagtttaggttttttcattgtgagaagtattgtcacataacagtggtgatacgggagagtacttgatatgaagcagcgatgttgagatcagatatccaactttattattattattttgatcccgtatgagtatttctgttatatctaatcattgagataaatttataagagtaaaagtgacttactt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="-" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="21160" stop="20078"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20860" g_stop="20378" g_length="483"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="483" r_length="483" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="-" ref_id="SGN-E324701" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>483</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E324701" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20860" e_stop="20378"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTTTCCATTAGGAAACATGGAATGCAGGATATAGAGTGGAAGGCTTCTTTTGTCTGATTTATTTTAGTTGTCGTTGATTCTTTTTTCCTGCTCTATTGTTCCTTCGTGTGTTTTATTCAAATGTGTTTTTTCTTGATATTTTTGTTATATATCCCTATTATTCTTTATGTGTTCTAACCTAGTTCAAGTATCCGACTTTGGTATGTTTTATGGATGTGGTGATGTTTTATTGATATGATTTGGTACAACATATCAAGCCTTTTTTCATCTATTAAAATTGTCACTGCCTTGTTTTAGTTTAGGTTTTTTCATTGTGAGAAGTATTGTCACATAACAGTGGTGATACGGGAGAGTACTTGATATGAAGCAGCGATGTTGAGATCAGATATCCAACTTTATTATTATTATTTTGATCCCGTATGAGTATTTCTGTTATATCTAATCATTGAGATAAATTTATAAGAGTAAAAGTGACTTACTT</genome_strand>
        <mrna_strand>AATTTTCCATTAGGAAACATGGAATGCANGATATAGAGTGGAAGGCTTCTTTTGTCTGATTTATTTTAGTTGTCGTTGATTCTTTTTTCCTGCTCTATTGTTCCTTCGTGTGTTTTATTCAAATGTGTTTTTTCTTGATATTTTTGTTATATATCCCTATTATTCTTTATGTGTTCTAACCTAGTTCAAGTATCCGACTTTGGTATGTTTTATGGATGTGGTGATGTTTTATTGATATGATTTGGTACAACATATCAAGCCTTTTTTCATCTATTAAAATTGTCACTGCCTTGTTTTAGTTTAGGTTTTTTCATTGTGAGAAGTATTGTCACATAACAGTGGTGATACGGGAGAGTACTTGATATGAAGCAGCGATGTTGAGATCAGATATCCAACTTTATTATTATTATTTTGATCCCGTATGAGTATTTCTGTTATATCTAATCATTGAGATAAATTTATAAGAGTAAAAGTGACTTACTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E323997" ref_strand="+" ref_description="SGN-E323997 [cTOC-3-J23]">
      <seq>taattttccattacgaaacatggaatgcaggatctagagtggaaggcttcttttgtctgatttattttagttgtcgttgattcttttttcctgctctattgttccttcgtgtgttttattcaaatgtgttttttcttgatattcttgttatatatccctattattctttatgtgttctaacctacttcaagtatccgactttggtatgttttatggatgtggtgatgttttattgatatgatttggtacaacatatcaagcctttgttcatctattaaaattgtcactgccttgttttagtttacgttttttcattgtgagaagtattgtcacataacagtggtgatacgggagagtacttgatatgaagcaccgatgttgagatcagatatccaactttattattattattttgatcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="-" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="21161" stop="20143"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20861" g_stop="20443" g_length="419"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="419" r_length="419" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="-" ref_id="SGN-E323997" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>419</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E323997" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20861" e_stop="20443"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAATTTTCCATTAGGAAACATGGAATGCAGGATATAGAGTGGAAGGCTTCTTTTGTCTGATTTATTTTAGTTGTCGTTGATTCTTTTTTCCTGCTCTATTGTTCCTTCGTGTGTTTTATTCAAATGTGTTTTTTCTTGATATTTTTGTTATATATCCCTATTATTCTTTATGTGTTCTAACCTAGTTCAAGTATCCGACTTTGGTATGTTTTATGGATGTGGTGATGTTTTATTGATATGATTTGGTACAACATATCAAGCCTTTTTTCATCTATTAAAATTGTCACTGCCTTGTTTTAGTTTAGGTTTTTTCATTGTGAGAAGTATTGTCACATAACAGTGGTGATACGGGAGAGTACTTGATATGAAGCAGCGATGTTGAGATCAGATATCCAACTTTATTATTATTATTTTGATCC</genome_strand>
        <mrna_strand>TAATTTTCCATTACGAAACATGGAATGCAGGATCTAGAGTGGAAGGCTTCTTTTGTCTGATTTATTTTAGTTGTCGTTGATTCTTTTTTCCTGCTCTATTGTTCCTTCGTGTGTTTTATTCAAATGTGTTTTTTCTTGATATTCTTGTTATATATCCCTATTATTCTTTATGTGTTCTAACCTACTTCAAGTATCCGACTTTGGTATGTTTTATGGATGTGGTGATGTTTTATTGATATGATTTGGTACAACATATCAAGCCTTTGTTCATCTATTAAAATTGTCACTGCCTTGTTTTAGTTTACGTTTTTTCATTGTGAGAAGTATTGTCACATAACAGTGGTGATACGGGAGAGTACTTGATATGAAGCACCGATGTTGAGATCAGATATCCAACTTTATTATTATTATTTTGATCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E415868" ref_strand="+" ref_description="SGN-E415868 [STM-22-I9]">
      <seq>natacttttttttatcngaaaactctgaattttctctccatcttatttctgtgctgccacttgctagacaaaagtataggtggacatctttcatgtgcaatacagaataggtaagcaattacatataaaaaatatacacgattgtatgttcaaaacattacaatgcccataacaaggaaaaatggaactggacggagaaggccttaactcgaaaaagaaggaaagaaaacatacatgacactacctcagactacaagtcccattacggtagccgcacttcttgaaacgaaaataccaagactatgactgcatcaccttatttggttcaacacatgtaggtgccttgaatgtttgacacttccacattggcctctcaagcggaaaaatgggattattacttgtagtacctttgctgatgttctcatcaaatgatgatgaactctttgatttcaaatcctctttagggcttgcttgatccctgaagctgcaaatgctgagtggtaactttttctgcttaagccttcctttctttttctcaatgctgcaattatcatttacagaatccccaactttctcctttgagataattgattctctttccttgttatccgtatttacatagtcagctttactagagtgtgatgcttccccattttccat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="+" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="26092" stop="27339"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26380" g_stop="27039" g_length="660"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="660" r_length="660" r_score="0.959"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="+" ref_id="SGN-E415868" ref_strand="+">
        <total_alignment_score>0.959</total_alignment_score>
        <cumulative_length_of_scored_exons>660</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E415868" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26380" e_stop="27039"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAACAGGAAGCTCTCTGAAAATTGTGAATTGTCTCTCCATCTTATTTCTGTGCTGCCACTTGCTAGACAAAAGTATAGTTGGACATCTTTCATGTGCAATACAGAATAGGTAAGCAATTAAATATCAAAAATATACACGATTGTATGTTCAAAACATTACAATGCCCATAACAAGGAAAAATGGAACTGGACGGAGAAGGCCTTAACTCGAAAAAGAAGGAAAGAAAACATACATGACACTACCTCAGACTACAAGTCCCATTACGGTAGCCGCACTTCTTGAAACGAAAATACCAATACTATGACTGCATCACCTTATTTTGTTCAACACATGTGGGTGCCTTGAATGTTTGACACTTCCACATTGGCCTCTCAAGCGGAAAAATGGGATTATTACTTGTAGTACCTTTGTTGATGTTCTCATCGAATGATGATGAACTCTTGGATTTCAAATCCTCTTTAGGGCTTGCTTGATCCCTGAAGCTGCAAATGCTGAGTGGTAACTTTTTCTGCTTAAGCCTTCCTTTCTTTTTCTCAATGCTGCAACTATCATTTACAGAATCCCCAACTTTCTCCTTTGAGATAATTGATTCTCTTTCCTTGTTTTCCATATTTACATTGTCAGCTTTACTAGAGTGTGATGCTTCCCCATTTTCCAT</genome_strand>
        <mrna_strand>NATACTTTTTTTTATCNGAAAACTCTGAATTTTCTCTCCATCTTATTTCTGTGCTGCCACTTGCTAGACAAAAGTATAGGTGGACATCTTTCATGTGCAATACAGAATAGGTAAGCAATTACATATAAAAAATATACACGATTGTATGTTCAAAACATTACAATGCCCATAACAAGGAAAAATGGAACTGGACGGAGAAGGCCTTAACTCGAAAAAGAAGGAAAGAAAACATACATGACACTACCTCAGACTACAAGTCCCATTACGGTAGCCGCACTTCTTGAAACGAAAATACCAAGACTATGACTGCATCACCTTATTTGGTTCAACACATGTAGGTGCCTTGAATGTTTGACACTTCCACATTGGCCTCTCAAGCGGAAAAATGGGATTATTACTTGTAGTACCTTTGCTGATGTTCTCATCAAATGATGATGAACTCTTTGATTTCAAATCCTCTTTAGGGCTTGCTTGATCCCTGAAGCTGCAAATGCTGAGTGGTAACTTTTTCTGCTTAAGCCTTCCTTTCTTTTTCTCAATGCTGCAATTATCATTTACAGAATCCCCAACTTTCTCCTTTGAGATAATTGATTCTCTTTCCTTGTTATCCGTATTTACATAGTCAGCTTTACTAGAGTGTGATGCTTCCCCATTTTCCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E434434" ref_strand="-" ref_description="SGN-E434434 [STM-59-N14]">
      <seq>agacggagaatggggaagcatcacactctagtaaagctgactatgtaaatacggataacaaggaaagagaatcaattatctcaaaggagaaagttggggattctgtaaatgatagttgcagcattgagaaaaagaaaggaaggcttaagcagaaaaagttaccactcagcatttgcagcttcagggatcaagcaagccctaaagaggatttgaaatcaaagagttcatcatcatttgatgagaacatcagcaaaggtactacaagtaataatcccatttttccgcttgagaggccaatgtggaagtgtcaaacattcaaggcacctacatgtgttgaaccaaataaggtgatgcagtcatagtcttggtattttcgtttcaagaagtgcggctaccgtaatgggacttgtagtctgaggtagtgtcatgtatgtttcctttccttctttttcgagttaaggccttctccgtccagttccatttttccttgttatgggcattgtaatgttttgaacatacaatcgtgtatattttttatatgtaattgcttacctattctgtattgcacatgaaagatgtccacctatacttttgtctagcaagtggcagcacagaaataagatggagagacaattcagagttttcaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="-" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="27341" stop="26092"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="27041" g_stop="26383" g_length="659"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="659" r_length="659" r_score="0.956"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="-" ref_id="SGN-E434434" ref_strand="-">
        <total_alignment_score>0.956</total_alignment_score>
        <cumulative_length_of_scored_exons>659</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E434434" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="27041" e_stop="26383"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAATGGAAAATGGGGAAGCATCACACTCTAGTAAAGCTGACAATGTAAATATGGAAAACAAGGAAAGAGAATCAATTATCTCAAAGGAGAAAGTTGGGGATTCTGTAAATGATAGTTGCAGCATTGAGAAAAAGAAAGGAAGGCTTAAGCAGAAAAAGTTACCACTCAGCATTTGCAGCTTCAGGGATCAAGCAAGCCCTAAAGAGGATTTGAAATCCAAGAGTTCATCATCATTCGATGAGAACATCAACAAAGGTACTACAAGTAATAATCCCATTTTTCCGCTTGAGAGGCCAATGTGGAAGTGTCAAACATTCAAGGCACCCACATGTGTTGAACAAAATAAGGTGATGCAGTCATAGTATTGGTATTTTCGTTTCAAGAAGTGCGGCTACCGTAATGGGACTTGTAGTCTGAGGTAGTGTCATGTATGTTTTCTTTCCTTCTTTTTCGAGTTAAGGCCTTCTCCGTCCAGTTCCATTTTTCCTTGTTATGGGCATTGTAATGTTTTGAACATACAATCGTGTATATTTTTGATATTTAATTGCTTACCTATTCTGTATTGCACATGAAAGATGTCCAACTATACTTTTGTCTAGCAAGTGGCAGCACAGAAATAAGATGGAGAGACAATTCACAATTTTCAGAGAGCTTCCTGT</genome_strand>
        <mrna_strand>AGACGGAGAATGGGGAAGCATCACACTCTAGTAAAGCTGACTATGTAAATACGGATAACAAGGAAAGAGAATCAATTATCTCAAAGGAGAAAGTTGGGGATTCTGTAAATGATAGTTGCAGCATTGAGAAAAAGAAAGGAAGGCTTAAGCAGAAAAAGTTACCACTCAGCATTTGCAGCTTCAGGGATCAAGCAAGCCCTAAAGAGGATTTGAAATCAAAGAGTTCATCATCATTTGATGAGAACATCAGCAAAGGTACTACAAGTAATAATCCCATTTTTCCGCTTGAGAGGCCAATGTGGAAGTGTCAAACATTCAAGGCACCTACATGTGTTGAACCAAATAAGGTGATGCAGTCATAGTCTTGGTATTTTCGTTTCAAGAAGTGCGGCTACCGTAATGGGACTTGTAGTCTGAGGTAGTGTCATGTATGTTTCCTTTCCTTCTTTTTCGAGTTAAGGCCTTCTCCGTCCAGTTCCATTTTTCCTTGTTATGGGCATTGTAATGTTTTGAACATACAATCGTGTATATTTTTTATATGTAATTGCTTACCTATTCTGTATTGCACATGAAAGATGTCCACCTATACTTTTGTCTAGCAAGTGGCAGCACAGAAATAAGATGGAGAGACAATTCAGAGTTTTCAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E410862" ref_strand="+" ref_description="SGN-E410862 [PPI-18-E12]">
      <seq>agacggagaatggggaagcatcacactctagtaaagctgactatgtaaatacggataacaaggaaagagaatcaattatctcaaaggagaaagttggggattctgtaaatgatagttgcagcattgagaaaaagaaaggaaggcttaagcagaaaaagttaccactcagcatttgcagcttcagggatcaagcaagccctaaagaggatttgaaatcaaagagttcatcatcatttgatgagaacatcagcaaaggtactacaagtaataatcccatttttccgcttgagaggccaatgtggaagtgtcaaacattcaaggcacctacatgtgttgaaccaaataaggtgatgcagtcatagtcttggtattttcgtttcaagaagtgcggctaccgtaatgggacttgtagtctgaggtagtgtcatgtatgtttcctttccttctttttcgagttaaggccttctccgtccagttccatttttccttgttatgggcattgtaatgttttgacatacaatcgtgtatattttttatatgtaattgcttacctattctgtattgcacatgaaagatgtccacctatacttttgtctagncagtggcagcacagaaataagatggagagacnattcagagttttcaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="-" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="27341" stop="26092"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="27041" g_stop="26384" g_length="658"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="657" r_length="657" r_score="0.951"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="-" ref_id="SGN-E410862" ref_strand="+">
        <total_alignment_score>0.951</total_alignment_score>
        <cumulative_length_of_scored_exons>658</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E410862" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="27041" e_stop="26384"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAATGGAAAATGGGGAAGCATCACACTCTAGTAAAGCTGACAATGTAAATATGGAAAACAAGGAAAGAGAATCAATTATCTCAAAGGAGAAAGTTGGGGATTCTGTAAATGATAGTTGCAGCATTGAGAAAAAGAAAGGAAGGCTTAAGCAGAAAAAGTTACCACTCAGCATTTGCAGCTTCAGGGATCAAGCAAGCCCTAAAGAGGATTTGAAATCCAAGAGTTCATCATCATTCGATGAGAACATCAACAAAGGTACTACAAGTAATAATCCCATTTTTCCGCTTGAGAGGCCAATGTGGAAGTGTCAAACATTCAAGGCACCCACATGTGTTGAACAAAATAAGGTGATGCAGTCATAGTATTGGTATTTTCGTTTCAAGAAGTGCGGCTACCGTAATGGGACTTGTAGTCTGAGGTAGTGTCATGTATGTTTTCTTTCCTTCTTTTTCGAGTTAAGGCCTTCTCCGTCCAGTTCCATTTTTCCTTGTTATGGGCATTGTAATGTTTTGAACATACAATCGTGTATATTTTTGATATTTAATTGCTTACCTATTCTGTATTGCACATGAAAGATGTCCAACTATACTTTTGTCTAGCAAGTGGCAGCACAGAAATAAGATGGAGAGACAATTCACAATTTTCAGAGAGCTTCCTG</genome_strand>
        <mrna_strand>AGACGGAGAATGGGGAAGCATCACACTCTAGTAAAGCTGACTATGTAAATACGGATAACAAGGAAAGAGAATCAATTATCTCAAAGGAGAAAGTTGGGGATTCTGTAAATGATAGTTGCAGCATTGAGAAAAAGAAAGGAAGGCTTAAGCAGAAAAAGTTACCACTCAGCATTTGCAGCTTCAGGGATCAAGCAAGCCCTAAAGAGGATTTGAAATCAAAGAGTTCATCATCATTTGATGAGAACATCAGCAAAGGTACTACAAGTAATAATCCCATTTTTCCGCTTGAGAGGCCAATGTGGAAGTGTCAAACATTCAAGGCACCTACATGTGTTGAACCAAATAAGGTGATGCAGTCATAGTCTTGGTATTTTCGTTTCAAGAAGTGCGGCTACCGTAATGGGACTTGTAGTCTGAGGTAGTGTCATGTATGTTTCCTTTCCTTCTTTTTCGAGTTAAGGCCTTCTCCGTCCAGTTCCATTTTTCCTTGTTATGGGCATTGTAATGTTTTG-ACATACAATCGTGTATATTTTTTATATGTAATTGCTTACCTATTCTGTATTGCACATGAAAGATGTCCACCTATACTTTTGTCTAGNCAGTGGCAGCACAGAAATAAGATGGAGAGACNATTCAGAGTTTTCAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E434433" ref_strand="+" ref_description="SGN-E434433 [STM-59-N14]">
      <seq>agacggagaatggggaagcatcacactctagtaaagctgactatgtaaatacggataacaaggaaagagaatcaattatctcaaaggagaaagttggggattctgtaaatgatagttgcagcattgagaaaaagaaaggaaggcttaagcagaaaaagttaccactcagcatttgcagcttcagggatcaagcaagccctaaagaggatttgaaatcaaagagttcatcatcatttgatgagaacatcagcaaaggtactacaagtaataatcccatttttccgcttgagaggccaatgtggaagtgtcaaacattcaaggcacctacatgtgttgaaccaaataaggtgatgcagtcatagtcttggtattttcgtttcaagaagtgcggctaccgtaatgggacttgtagtctgaggtagtgtcatgtatgtttcctttccttctttttcgagttaaggccttctccgtccagttccatttttccttgttatgggcattgtaatgttttgaacatacaatcgtgtatattttttatatgtaattgcttacctattctgtattgcacatgaaagatgtccacctatacttttgtctagcaagtggcagcacagaaataagatggagagacnattcagagttttcaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="-" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="27341" stop="26092"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="27041" g_stop="26384" g_length="658"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="658" r_length="658" r_score="0.956"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="-" ref_id="SGN-E434433" ref_strand="+">
        <total_alignment_score>0.956</total_alignment_score>
        <cumulative_length_of_scored_exons>658</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E434433" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="27041" e_stop="26384"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAATGGAAAATGGGGAAGCATCACACTCTAGTAAAGCTGACAATGTAAATATGGAAAACAAGGAAAGAGAATCAATTATCTCAAAGGAGAAAGTTGGGGATTCTGTAAATGATAGTTGCAGCATTGAGAAAAAGAAAGGAAGGCTTAAGCAGAAAAAGTTACCACTCAGCATTTGCAGCTTCAGGGATCAAGCAAGCCCTAAAGAGGATTTGAAATCCAAGAGTTCATCATCATTCGATGAGAACATCAACAAAGGTACTACAAGTAATAATCCCATTTTTCCGCTTGAGAGGCCAATGTGGAAGTGTCAAACATTCAAGGCACCCACATGTGTTGAACAAAATAAGGTGATGCAGTCATAGTATTGGTATTTTCGTTTCAAGAAGTGCGGCTACCGTAATGGGACTTGTAGTCTGAGGTAGTGTCATGTATGTTTTCTTTCCTTCTTTTTCGAGTTAAGGCCTTCTCCGTCCAGTTCCATTTTTCCTTGTTATGGGCATTGTAATGTTTTGAACATACAATCGTGTATATTTTTGATATTTAATTGCTTACCTATTCTGTATTGCACATGAAAGATGTCCAACTATACTTTTGTCTAGCAAGTGGCAGCACAGAAATAAGATGGAGAGACAATTCACAATTTTCAGAGAGCTTCCTG</genome_strand>
        <mrna_strand>AGACGGAGAATGGGGAAGCATCACACTCTAGTAAAGCTGACTATGTAAATACGGATAACAAGGAAAGAGAATCAATTATCTCAAAGGAGAAAGTTGGGGATTCTGTAAATGATAGTTGCAGCATTGAGAAAAAGAAAGGAAGGCTTAAGCAGAAAAAGTTACCACTCAGCATTTGCAGCTTCAGGGATCAAGCAAGCCCTAAAGAGGATTTGAAATCAAAGAGTTCATCATCATTTGATGAGAACATCAGCAAAGGTACTACAAGTAATAATCCCATTTTTCCGCTTGAGAGGCCAATGTGGAAGTGTCAAACATTCAAGGCACCTACATGTGTTGAACCAAATAAGGTGATGCAGTCATAGTCTTGGTATTTTCGTTTCAAGAAGTGCGGCTACCGTAATGGGACTTGTAGTCTGAGGTAGTGTCATGTATGTTTCCTTTCCTTCTTTTTCGAGTTAAGGCCTTCTCCGTCCAGTTCCATTTTTCCTTGTTATGGGCATTGTAATGTTTTGAACATACAATCGTGTATATTTTTTATATGTAATTGCTTACCTATTCTGTATTGCACATGAAAGATGTCCACCTATACTTTTGTCTAGCAAGTGGCAGCACAGAAATAAGATGGAGAGACNATTCAGAGTTTTCAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E351674" ref_strand="+" ref_description="SGN-E351674 [cTOS-8-O5]">
      <seq>agggatcaagcaagccctaaagaggatttgaaatccaagagttcatcatcattcgatgagaacatcaacaaaggtactacaagtaataatcccatttttccgcttgagaggccaatgtggaagtgtcaaacattcaaggcacccacatgtgttgaacaaaataaggtgatgcagtcatagtattggtattttcgtttcaagaagtgcggctaccgtaatgggacttgtagtctgaggtagtgtcatgtatgttttctttccttctttttcgagttaaggccttctccgtccagttccatttttccttgttatgggcattgtaatgttttgaacatacaatcgtgtatatttttgatatttaattgcttacctattctgtattgcaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="-" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="27159" stop="26166"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26859" g_stop="26465" g_length="395"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="395" r_length="395" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="-" ref_id="SGN-E351674" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>395</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E351674" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26859" e_stop="26465"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGGATCAAGCAAGCCCTAAAGAGGATTTGAAATCCAAGAGTTCATCATCATTCGATGAGAACATCAACAAAGGTACTACAAGTAATAATCCCATTTTTCCGCTTGAGAGGCCAATGTGGAAGTGTCAAACATTCAAGGCACCCACATGTGTTGAACAAAATAAGGTGATGCAGTCATAGTATTGGTATTTTCGTTTCAAGAAGTGCGGCTACCGTAATGGGACTTGTAGTCTGAGGTAGTGTCATGTATGTTTTCTTTCCTTCTTTTTCGAGTTAAGGCCTTCTCCGTCCAGTTCCATTTTTCCTTGTTATGGGCATTGTAATGTTTTGAACATACAATCGTGTATATTTTTGATATTTAATTGCTTACCTATTCTGTATTGCACATGAAAGAT</genome_strand>
        <mrna_strand>AGGGATCAAGCAAGCCCTAAAGAGGATTTGAAATCCAAGAGTTCATCATCATTCGATGAGAACATCAACAAAGGTACTACAAGTAATAATCCCATTTTTCCGCTTGAGAGGCCAATGTGGAAGTGTCAAACATTCAAGGCACCCACATGTGTTGAACAAAATAAGGTGATGCAGTCATAGTATTGGTATTTTCGTTTCAAGAAGTGCGGCTACCGTAATGGGACTTGTAGTCTGAGGTAGTGTCATGTATGTTTTCTTTCCTTCTTTTTCGAGTTAAGGCCTTCTCCGTCCAGTTCCATTTTTCCTTGTTATGGGCATTGTAATGTTTTGAACATACAATCGTGTATATTTTTGATATTTAATTGCTTACCTATTCTGTATTGCAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E357513" ref_strand="+" ref_description="SGN-E357513 [cTOS-23-O16]">
      <seq>agggatcaagcaagccctaaagaggatttgaaatccaagagttcatcatcattcgatgagaacatcaacaaaggtactacaagtaataatcccatttttccgcttgagaggccaatgtggaagtgtcaaacattcaaggcacccacatgtgttgaacaaaataaggtgatgcagtcatagtattggtattttcgtttcaagaagtgcggctaccgtaatgggacttgtagtctgaggtagtgtcatgtatgttttctttccttctttttcgagttaaggccttctccgtccagttccatttttccttgttatgggcattgtaatgttttgaacatacaatcgtgtatatttttgatatttaattgcttacctattctgtattgcaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="-" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="27159" stop="26166"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26859" g_stop="26465" g_length="395"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="395" r_length="395" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="-" ref_id="SGN-E357513" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>395</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E357513" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26859" e_stop="26465"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGGATCAAGCAAGCCCTAAAGAGGATTTGAAATCCAAGAGTTCATCATCATTCGATGAGAACATCAACAAAGGTACTACAAGTAATAATCCCATTTTTCCGCTTGAGAGGCCAATGTGGAAGTGTCAAACATTCAAGGCACCCACATGTGTTGAACAAAATAAGGTGATGCAGTCATAGTATTGGTATTTTCGTTTCAAGAAGTGCGGCTACCGTAATGGGACTTGTAGTCTGAGGTAGTGTCATGTATGTTTTCTTTCCTTCTTTTTCGAGTTAAGGCCTTCTCCGTCCAGTTCCATTTTTCCTTGTTATGGGCATTGTAATGTTTTGAACATACAATCGTGTATATTTTTGATATTTAATTGCTTACCTATTCTGTATTGCACATGAAAGAT</genome_strand>
        <mrna_strand>AGGGATCAAGCAAGCCCTAAAGAGGATTTGAAATCCAAGAGTTCATCATCATTCGATGAGAACATCAACAAAGGTACTACAAGTAATAATCCCATTTTTCCGCTTGAGAGGCCAATGTGGAAGTGTCAAACATTCAAGGCACCCACATGTGTTGAACAAAATAAGGTGATGCAGTCATAGTATTGGTATTTTCGTTTCAAGAAGTGCGGCTACCGTAATGGGACTTGTAGTCTGAGGTAGTGTCATGTATGTTTTCTTTCCTTCTTTTTCGAGTTAAGGCCTTCTCCGTCCAGTTCCATTTTTCCTTGTTATGGGCATTGTAATGTTTTGAACATACAATCGTGTATATTTTTGATATTTAATTGCTTACCTATTCTGTATTGCAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E355289" ref_strand="+" ref_description="SGN-E355289 [cTOS-18-A21]">
      <seq>gttgcagcattgagaaaaagaaaggaaggcttaagcagaaaaagttaccactcagcatttgcagcttcagggatcaagcaagccctaaagaggatttgaaatccaagagttcatcatcattcgatgagaacatcaacaaaggtactacaagtaataatcccatttttccgcttgagaggccaatgtggaagtgtcaaacattcaaggcacccacatgtgttgaacaaaataaggtgatgcagtcatagtattggtattttcgtttcaagaagtgcggctaccgtaatgggacttgtagtctgaggtagtgtcatgtatgttttctttccttctttttcgagttaaggccttctccgtccagttccatttttccttgttatgggcattgtaatgttttgaacatacaatcgtgtatatttttgatatttaattgcttacctattctgtattgcaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="-" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="27227" stop="26166"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26927" g_stop="26466" g_length="462"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="462" r_length="462" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="-" ref_id="SGN-E355289" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>462</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E355289" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26927" e_stop="26466"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTGCAGCATTGAGAAAAAGAAAGGAAGGCTTAAGCAGAAAAAGTTACCACTCAGCATTTGCAGCTTCAGGGATCAAGCAAGCCCTAAAGAGGATTTGAAATCCAAGAGTTCATCATCATTCGATGAGAACATCAACAAAGGTACTACAAGTAATAATCCCATTTTTCCGCTTGAGAGGCCAATGTGGAAGTGTCAAACATTCAAGGCACCCACATGTGTTGAACAAAATAAGGTGATGCAGTCATAGTATTGGTATTTTCGTTTCAAGAAGTGCGGCTACCGTAATGGGACTTGTAGTCTGAGGTAGTGTCATGTATGTTTTCTTTCCTTCTTTTTCGAGTTAAGGCCTTCTCCGTCCAGTTCCATTTTTCCTTGTTATGGGCATTGTAATGTTTTGAACATACAATCGTGTATATTTTTGATATTTAATTGCTTACCTATTCTGTATTGCACATGAAAGA</genome_strand>
        <mrna_strand>GTTGCAGCATTGAGAAAAAGAAAGGAAGGCTTAAGCAGAAAAAGTTACCACTCAGCATTTGCAGCTTCAGGGATCAAGCAAGCCCTAAAGAGGATTTGAAATCCAAGAGTTCATCATCATTCGATGAGAACATCAACAAAGGTACTACAAGTAATAATCCCATTTTTCCGCTTGAGAGGCCAATGTGGAAGTGTCAAACATTCAAGGCACCCACATGTGTTGAACAAAATAAGGTGATGCAGTCATAGTATTGGTATTTTCGTTTCAAGAAGTGCGGCTACCGTAATGGGACTTGTAGTCTGAGGTAGTGTCATGTATGTTTTCTTTCCTTCTTTTTCGAGTTAAGGCCTTCTCCGTCCAGTTCCATTTTTCCTTGTTATGGGCATTGTAATGTTTTGAACATACAATCGTGTATATTTTTGATATTTAATTGCTTACCTATTCTGTATTGCAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E552956" ref_strand="+" ref_description="SGN-E552956 [cTSB-5-J12]">
      <seq>agactctaatcgatctaatgaggagattgctgaggcctcaagattggcagctctagaagctgtgaaggctgcaaaagctgcaagagccattgcagaagagaaggctgcgaaagcagcaaaggctgtggctgctgctaagagcgctctagaattggttgccactctctctgatgagggaaccagtagggacaaacatttgaagaggaataagatgaaaaaacatgttcctgttcagacgctgtataataagaataaggggactgatgattgtagaacagatgaagagttagctcggacgttgcatagggccattaatagctctccaagaattttgaagaactcaacatctgactcaagaaatcaaaaacataagaggctgaagaggtcttctccttctgaaaaatctaagcttcagactggaagtacatccgtggaaggaaactgtccttccacgagcaatgggaatggttttactagagaaagagagtcagataggcatatctcggataaagaccttgttagagtagatttaaacacaaaatttaataaatctgacctcacaaaaatggaaaatggggaagcatcacactctagtaaagctgacaatgtaaatatggaaaacaaggaaagagaatcaattatctcaaaggagaaagttggggattctgtaaatgatagttgcagcattgagaaaaagaaaggaaggcttaagcagaaaaagttaccactcagcatttgcagcttcagggatcaagcaagccctaaagaggatttgaaatccaagagttcatcatcattcgatgagaacatcaacaaaagtactacaagtaataatcccatttttccgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="-" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="27904" stop="26456"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="27604" g_stop="26756" g_length="849"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="849" r_length="849" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="-" ref_id="SGN-E552956" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>849</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E552956" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="27604" e_stop="26756"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGACTCTAATCGATCTAATGAGGAGATTGCTGAGGCCTCAAGATTGGCAGCTCTAGAAGCTGTGAAGGCTGCAAAAGCTGCAAGAGCCATTGCAGAAGAGAAGGCTGCGAAAGCAGCAAAGGCTGTGGCTGCTGCTAAGAGCGCTCTAGAATTGGTTGCCACTCTCTCTGATGAGGGAACCAGTAGGGACAAACATTTGAAGAGGAATAAGATGAAAAAACATGTTCCTGTTCAGACGCTGTATAATAAGAATAAGGGGACTGATGATTGTAGAACAGATGAAGAGTTAGCTCGGACGTTGCATAGGGCCATTAATAGCTCTCCAAGAATTTTGAAGAACTCAACATCTGACTCAAGAAATCAAAAACATAAGAGGCTGAAGAGGTCTTCTCCTTCTGAAAAATCTAAGCTTCAGACTGGAAGTACATCCGTGGAAGGAAACTGTCCTTCCACGAGCAATGGGAATGGTTTTACTAGAGAAAGAGAGTCAGATAGGCATATCTCGGATAAAGACCTTGTTAGAGTAGATTTAAACACAAAATTTAATAAATCTGACCTCACAAAAATGGAAAATGGGGAAGCATCACACTCTAGTAAAGCTGACAATGTAAATATGGAAAACAAGGAAAGAGAATCAATTATCTCAAAGGAGAAAGTTGGGGATTCTGTAAATGATAGTTGCAGCATTGAGAAAAAGAAAGGAAGGCTTAAGCAGAAAAAGTTACCACTCAGCATTTGCAGCTTCAGGGATCAAGCAAGCCCTAAAGAGGATTTGAAATCCAAGAGTTCATCATCATTCGATGAGAACATCAACAAAGGTACTACAAGTAATAATCCCATTTTTCCGCT</genome_strand>
        <mrna_strand>AGACTCTAATCGATCTAATGAGGAGATTGCTGAGGCCTCAAGATTGGCAGCTCTAGAAGCTGTGAAGGCTGCAAAAGCTGCAAGAGCCATTGCAGAAGAGAAGGCTGCGAAAGCAGCAAAGGCTGTGGCTGCTGCTAAGAGCGCTCTAGAATTGGTTGCCACTCTCTCTGATGAGGGAACCAGTAGGGACAAACATTTGAAGAGGAATAAGATGAAAAAACATGTTCCTGTTCAGACGCTGTATAATAAGAATAAGGGGACTGATGATTGTAGAACAGATGAAGAGTTAGCTCGGACGTTGCATAGGGCCATTAATAGCTCTCCAAGAATTTTGAAGAACTCAACATCTGACTCAAGAAATCAAAAACATAAGAGGCTGAAGAGGTCTTCTCCTTCTGAAAAATCTAAGCTTCAGACTGGAAGTACATCCGTGGAAGGAAACTGTCCTTCCACGAGCAATGGGAATGGTTTTACTAGAGAAAGAGAGTCAGATAGGCATATCTCGGATAAAGACCTTGTTAGAGTAGATTTAAACACAAAATTTAATAAATCTGACCTCACAAAAATGGAAAATGGGGAAGCATCACACTCTAGTAAAGCTGACAATGTAAATATGGAAAACAAGGAAAGAGAATCAATTATCTCAAAGGAGAAAGTTGGGGATTCTGTAAATGATAGTTGCAGCATTGAGAAAAAGAAAGGAAGGCTTAAGCAGAAAAAGTTACCACTCAGCATTTGCAGCTTCAGGGATCAAGCAAGCCCTAAAGAGGATTTGAAATCCAAGAGTTCATCATCATTCGATGAGAACATCAACAAAAGTACTACAAGTAATAATCCCATTTTTCCGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E727854" ref_strand="+" ref_description="SGN-E727854 [LA15DH01]">
      <seq>ctaaaaaccctaatttcaacttcttctgtaaaatgacaagatcagtttgaaagtgtgtagatgtaggaaaaagatggaagctaatgtatgtgatattaatcacttggatgccgatgtgcttttgcctccacgtaagcggcttcttgctggattgaagaagcagaattctgatgtttactcatctaccccatccccaccaactgttaatagtcccccgtgtgattttgatatccgtcttaataatctattgaagtctcattttggagactctaatcgatctaatgaggagattgctgaggcctcaagattggcagctctagaagctgtgaaggctgcaaaagctgcaagagccattgcagaagagaaggctgcgaaagcagcaaaggctgtggctgctgctaagagcgctctagaattggttgccactctctctgatgagggaaccagtagggacaaacatttgaagaggaataagatgaaaaaacatgttcctgttcagacgctgtataataagaataaggggactgatgattgtagaacagatgaagagttagctcggacgttgcatagggccattaatagctctccaagaattttgaagaactcaacatctgactcaagaaatcaaaaacataagaggctgaagaggtcttctccttctgaaaaatctaagcttcagactggaagtacatccgtggaaggaaactgtccttccacgagcaatgggaatggttttactagagaatcaattatctcaaaggagaaagttggggattctgtnaatgatagttgcagcattgagaaaaagaaaggaaggcttaagcagaaaaagttaccactcagcatttgcagcttcagggatcaagcaagccctaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="-" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="28642" stop="26540"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28342" g_stop="28298" g_length="45"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="45" r_length="45" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="28297" i_stop="27824" i_length="474">
            <donor d_prob="0.969" d_score="1.00"/>
            <acceptor a_prob="0.963" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="27823" g_stop="27128" g_length="696"/>
          <reference_exon_boundary r_type="cDNA" r_start="46" r_stop="741" r_length="696" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="27127" i_stop="26975" i_length="153">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="26974" g_stop="26840" g_length="135"/>
          <reference_exon_boundary r_type="cDNA" r_start="742" r_stop="876" r_length="135" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="-" ref_id="SGN-E727854" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>876</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E727854" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28342" e_stop="28298"/>
          <exon e_start="27823" e_stop="27128"/>
          <exon e_start="26974" e_stop="26840"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTAAAAACCCTAATTTCAACTTCTTCTGTAAAATGACAAGATCAGGTATTTAGCCTTCATTGATTCTCATTGTGTTCAATTCTCGGCGTTTCATCTTAATTGCACATAAAAAATTGGGACTTTTTTTAATGTTAAATTTTTATCTAAGGAGCTAAGTTCATTTAGATTTGCATAATTCTCTTGAATCAGCTGCTAATTATCCTGGATTATGGTGAATTACGTACAAATCATCTGTTTTTGATATTGGAAGGTTGGAAAATCTTGAACTGACCTGAATTTGATTCATTTTTTAGTCTGTTGGTTTATTTTTCTGCTCTCTGCTTGTGGGTTTGGATTGAATTTGGGATTGTTTGATTGATTCGGATTGAATTGAATGGAGCGATTGAGTTTTTGGTAGTTTAGGGTTAATAGTATGTGAATCTAATGTAGGGTTTGGAAATAACAAGCAGTCAGCTGGTAGTTTTGTTTTTATAAAACTTTGTGCTAATAAAGGTGTGATTTTTAATGTTGTTTTTGTAGTTTGAAAGTGTGTAGATGTAGGAAAAAGATGGAAGCTAATGTATGTGATATTAATCACTTGGATGCCGATGTGCTTTTGCCTCCACGTAAGCGGCTTCTTGCTGGATTGAAGAAGCAGAATTCTGATGTTTACTCATCTACCCCATCCCCACCAACTGTTAATAGTCCCCCGTGTGATTTTGATATCCGTCTTAATAATCTATTGAAGTCTCATTTTGGAGACTCTAATCGATCTAATGAGGAGATTGCTGAGGCCTCAAGATTGGCAGCTCTAGAAGCTGTGAAGGCTGCAAAAGCTGCAAGAGCCATTGCAGAAGAGAAGGCTGCGAAAGCAGCAAAGGCTGTGGCTGCTGCTAAGAGCGCTCTAGAATTGGTTGCCACTCTCTCTGATGAGGGAACCAGTAGGGACAAACATTTGAAGAGGAATAAGATGAAAAAACATGTTCCTGTTCAGACGCTGTATAATAAGAATAAGGGGACTGATGATTGTAGAACAGATGAAGAGTTAGCTCGGACGTTGCATAGGGCCATTAATAGCTCTCCAAGAATTTTGAAGAACTCAACATCTGACTCAAGAAATCAAAAACATAAGAGGCTGAAGAGGTCTTCTCCTTCTGAAAAATCTAAGCTTCAGACTGGAAGTACATCCGTGGAAGGAAACTGTCCTTCCACGAGCAATGGGAATGGTTTTACTAGAGAAAGAGAGTCAGATAGGCATATCTCGGATAAAGACCTTGTTAGAGTAGATTTAAACACAAAATTTAATAAATCTGACCTCACAAAAATGGAAAATGGGGAAGCATCACACTCTAGTAAAGCTGACAATGTAAATATGGAAAACAAGGAAAGAGAATCAATTATCTCAAAGGAGAAAGTTGGGGATTCTGTAAATGATAGTTGCAGCATTGAGAAAAAGAAAGGAAGGCTTAAGCAGAAAAAGTTACCACTCAGCATTTGCAGCTTCAGGGATCAAGCAAGCCCTAA</genome_strand>
        <mrna_strand>CTAAAAACCCTAATTTCAACTTCTTCTGTAAAATGACAAGATCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGAAAGTGTGTAGATGTAGGAAAAAGATGGAAGCTAATGTATGTGATATTAATCACTTGGATGCCGATGTGCTTTTGCCTCCACGTAAGCGGCTTCTTGCTGGATTGAAGAAGCAGAATTCTGATGTTTACTCATCTACCCCATCCCCACCAACTGTTAATAGTCCCCCGTGTGATTTTGATATCCGTCTTAATAATCTATTGAAGTCTCATTTTGGAGACTCTAATCGATCTAATGAGGAGATTGCTGAGGCCTCAAGATTGGCAGCTCTAGAAGCTGTGAAGGCTGCAAAAGCTGCAAGAGCCATTGCAGAAGAGAAGGCTGCGAAAGCAGCAAAGGCTGTGGCTGCTGCTAAGAGCGCTCTAGAATTGGTTGCCACTCTCTCTGATGAGGGAACCAGTAGGGACAAACATTTGAAGAGGAATAAGATGAAAAAACATGTTCCTGTTCAGACGCTGTATAATAAGAATAAGGGGACTGATGATTGTAGAACAGATGAAGAGTTAGCTCGGACGTTGCATAGGGCCATTAATAGCTCTCCAAGAATTTTGAAGAACTCAACATCTGACTCAAGAAATCAAAAACATAAGAGGCTGAAGAGGTCTTCTCCTTCTGAAAAATCTAAGCTTCAGACTGGAAGTACATCCGTGGAAGGAAACTGTCCTTCCACGAGCAATGGGAATGGTTTTACTAG.........................................................................................................................................................AGAATCAATTATCTCAAAGGAGAAAGTTGGGGATTCTGTNAATGATAGTTGCAGCATTGAGAAAAAGAAAGGAAGGCTTAAGCAGAAAAAGTTACCACTCAGCATTTGCAGCTTCAGGGATCAAGCAAGCCCTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E269588" ref_strand="+" ref_description="SGN-E269588 [cLEM-2-B23]">
      <seq>tgaggcctcaagattggcagctctagaagctgtgaaggctgcaaaagctgcaagagccattgcagaagagaaggctgcgaaagcagcaaaggctgtggctgctgctaagagcgctctagaattggttgccactctctctgatgagggaaccagtagggacaaacatttgaagaggaataagatgaaaaaacatgttcctgttcagacgctgtataataagaataaggggactgatgattgtagaacagatgaagagttagctcggacgttgcatagggccattaatagctctccaagaattttgaagaactcaacatctgactcaagaaatcaaaaacataagaggctgaagaggtcttctccttctgaaaaatctaagcttcagactggaagtacatccgtggaaggaaactgtccttccacgagcaatgggaatggttttactagagaaagagagtcagataggcatatctcggataaagaccttgttagagtagatttaaacacaaaatttaataaatctgacctcacaaaaatggaaaatggggaagcatcacactctagtaaagctga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="-" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="27874" stop="26702"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="27574" g_stop="27002" g_length="573"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="573" r_length="573" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="-" ref_id="SGN-E269588" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>573</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E269588" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="27574" e_stop="27002"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAGGCCTCAAGATTGGCAGCTCTAGAAGCTGTGAAGGCTGCAAAAGCTGCAAGAGCCATTGCAGAAGAGAAGGCTGCGAAAGCAGCAAAGGCTGTGGCTGCTGCTAAGAGCGCTCTAGAATTGGTTGCCACTCTCTCTGATGAGGGAACCAGTAGGGACAAACATTTGAAGAGGAATAAGATGAAAAAACATGTTCCTGTTCAGACGCTGTATAATAAGAATAAGGGGACTGATGATTGTAGAACAGATGAAGAGTTAGCTCGGACGTTGCATAGGGCCATTAATAGCTCTCCAAGAATTTTGAAGAACTCAACATCTGACTCAAGAAATCAAAAACATAAGAGGCTGAAGAGGTCTTCTCCTTCTGAAAAATCTAAGCTTCAGACTGGAAGTACATCCGTGGAAGGAAACTGTCCTTCCACGAGCAATGGGAATGGTTTTACTAGAGAAAGAGAGTCAGATAGGCATATCTCGGATAAAGACCTTGTTAGAGTAGATTTAAACACAAAATTTAATAAATCTGACCTCACAAAAATGGAAAATGGGGAAGCATCACACTCTAGTAAAGCTGA</genome_strand>
        <mrna_strand>TGAGGCCTCAAGATTGGCAGCTCTAGAAGCTGTGAAGGCTGCAAAAGCTGCAAGAGCCATTGCAGAAGAGAAGGCTGCGAAAGCAGCAAAGGCTGTGGCTGCTGCTAAGAGCGCTCTAGAATTGGTTGCCACTCTCTCTGATGAGGGAACCAGTAGGGACAAACATTTGAAGAGGAATAAGATGAAAAAACATGTTCCTGTTCAGACGCTGTATAATAAGAATAAGGGGACTGATGATTGTAGAACAGATGAAGAGTTAGCTCGGACGTTGCATAGGGCCATTAATAGCTCTCCAAGAATTTTGAAGAACTCAACATCTGACTCAAGAAATCAAAAACATAAGAGGCTGAAGAGGTCTTCTCCTTCTGAAAAATCTAAGCTTCAGACTGGAAGTACATCCGTGGAAGGAAACTGTCCTTCCACGAGCAATGGGAATGGTTTTACTAGAGAAAGAGAGTCAGATAGGCATATCTCGGATAAAGACCTTGTTAGAGTAGATTTAAACACAAAATTTAATAAATCTGACCTCACAAAAATGGAAAATGGGGAAGCATCACACTCTAGTAAAGCTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E703247" ref_strand="+" ref_description="SGN-E703247 [FA20DH07]">
      <seq>caccatctttctttcttcacatctctctctttttttctctctctctaaaaaccctaatttcaacttcttctgtaaaatgacaagatcagtttgaaagtgtgtagatgtaggaaaaagatggaagctaatgtatgtgatattaatcacttggatgccgatgtgcttttgcctccacgtaagcggcttcttgctggattgaagaagcagaattctgatgtttactcatctaccccatccccaccaactgttaatagtcccccgtgtgattttgatatccgtcttaataatctattgaagtctcattttggagactctaatcgatctaatgaggagattgctgaggcctcaagattggcagctctagaagctgtgaaggctgcaaaagctgcaagagccattgcagaagagaaggctgcgaaagcagcaaaggctgtggctgctgctaagagcgctctagaattggttgccactctctctgatgagggaaccagtagggacaaacatttgaagaggaataagatgaaaaaacatgttcctgttcagacgctgtataataagaataaggggactgatgattgtagaacagatgaagagttagctcggacgttgcatagggccattaatagctctccaagaattttgaagaactcaacatctgactcaagaaatcaaaaacataagaggctgaagaggtcttctccttctgaaaaatctaagcttcagactggaagtacatccgtggaaggaaactgtccttccacgagcaatgggaaatggtttactagagaaagagagtcagataggcatatctcggataaagaccttgtta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="-" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="28686" stop="26784"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28386" g_stop="28298" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="89" r_length="89" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="28297" i_stop="27824" i_length="474">
            <donor d_prob="0.969" d_score="1.00"/>
            <acceptor a_prob="0.963" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="27823" g_stop="27084" g_length="740"/>
          <reference_exon_boundary r_type="cDNA" r_start="90" r_stop="829" r_length="740" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="-" ref_id="SGN-E703247" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>829</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E703247" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28386" e_stop="28298"/>
          <exon e_start="27823" e_stop="27084"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACCATCTTTCTTTCTTCACATCTCTCTCTTTTTTTCTCTCTCTCTAAAAACCCTAATTTCAACTTCTTCTGTAAAATGACAAGATCAGGTATTTAGCCTTCATTGATTCTCATTGTGTTCAATTCTCGGCGTTTCATCTTAATTGCACATAAAAAATTGGGACTTTTTTTAATGTTAAATTTTTATCTAAGGAGCTAAGTTCATTTAGATTTGCATAATTCTCTTGAATCAGCTGCTAATTATCCTGGATTATGGTGAATTACGTACAAATCATCTGTTTTTGATATTGGAAGGTTGGAAAATCTTGAACTGACCTGAATTTGATTCATTTTTTAGTCTGTTGGTTTATTTTTCTGCTCTCTGCTTGTGGGTTTGGATTGAATTTGGGATTGTTTGATTGATTCGGATTGAATTGAATGGAGCGATTGAGTTTTTGGTAGTTTAGGGTTAATAGTATGTGAATCTAATGTAGGGTTTGGAAATAACAAGCAGTCAGCTGGTAGTTTTGTTTTTATAAAACTTTGTGCTAATAAAGGTGTGATTTTTAATGTTGTTTTTGTAGTTTGAAAGTGTGTAGATGTAGGAAAAAGATGGAAGCTAATGTATGTGATATTAATCACTTGGATGCCGATGTGCTTTTGCCTCCACGTAAGCGGCTTCTTGCTGGATTGAAGAAGCAGAATTCTGATGTTTACTCATCTACCCCATCCCCACCAACTGTTAATAGTCCCCCGTGTGATTTTGATATCCGTCTTAATAATCTATTGAAGTCTCATTTTGGAGACTCTAATCGATCTAATGAGGAGATTGCTGAGGCCTCAAGATTGGCAGCTCTAGAAGCTGTGAAGGCTGCAAAAGCTGCAAGAGCCATTGCAGAAGAGAAGGCTGCGAAAGCAGCAAAGGCTGTGGCTGCTGCTAAGAGCGCTCTAGAATTGGTTGCCACTCTCTCTGATGAGGGAACCAGTAGGGACAAACATTTGAAGAGGAATAAGATGAAAAAACATGTTCCTGTTCAGACGCTGTATAATAAGAATAAGGGGACTGATGATTGTAGAACAGATGAAGAGTTAGCTCGGACGTTGCATAGGGCCATTAATAGCTCTCCAAGAATTTTGAAGAACTCAACATCTGACTCAAGAAATCAAAAACATAAGAGGCTGAAGAGGTCTTCTCCTTCTGAAAAATCTAAGCTTCAGACTGGAAGTACATCCGTGGAAGGAAACTGTCCTTCCACGAGCAATGGGAATGGTTTTACTAGAGAAAGAGAGTCAGATAGGCATATCTCGGATAAAGACCTTGTTA</genome_strand>
        <mrna_strand>CACCATCTTTCTTTCTTCACATCTCTCTCTTTTTTTCTCTCTCTCTAAAAACCCTAATTTCAACTTCTTCTGTAAAATGACAAGATCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGAAAGTGTGTAGATGTAGGAAAAAGATGGAAGCTAATGTATGTGATATTAATCACTTGGATGCCGATGTGCTTTTGCCTCCACGTAAGCGGCTTCTTGCTGGATTGAAGAAGCAGAATTCTGATGTTTACTCATCTACCCCATCCCCACCAACTGTTAATAGTCCCCCGTGTGATTTTGATATCCGTCTTAATAATCTATTGAAGTCTCATTTTGGAGACTCTAATCGATCTAATGAGGAGATTGCTGAGGCCTCAAGATTGGCAGCTCTAGAAGCTGTGAAGGCTGCAAAAGCTGCAAGAGCCATTGCAGAAGAGAAGGCTGCGAAAGCAGCAAAGGCTGTGGCTGCTGCTAAGAGCGCTCTAGAATTGGTTGCCACTCTCTCTGATGAGGGAACCAGTAGGGACAAACATTTGAAGAGGAATAAGATGAAAAAACATGTTCCTGTTCAGACGCTGTATAATAAGAATAAGGGGACTGATGATTGTAGAACAGATGAAGAGTTAGCTCGGACGTTGCATAGGGCCATTAATAGCTCTCCAAGAATTTTGAAGAACTCAACATCTGACTCAAGAAATCAAAAACATAAGAGGCTGAAGAGGTCTTCTCCTTCTGAAAAATCTAAGCTTCAGACTGGAAGTACATCCGTGGAAGGAAACTGTCCTTCCACGAGCAATGGGAAATGGTTTACTAGAGAAAGAGAGTCAGATAGGCATATCTCGGATAAAGACCTTGTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E614869" ref_strand="+" ref_description="SGN-E614869 [64661]">
      <seq>gtgcttttgcctccacgtaagcggcttcttgctggattgaagaagcagaattctgatgtttactcatctaccccatccccgccaactgtttgtagccccccgtgtgattttgatatccgtcttaataatctattgaagtctcattttggagactctaatcgatcttatgaggagattgctgaggcctcaagattggcagctctagaagctgtgaaggctgccgaagctgcgagagccattgcagaagagaaggctgcgaaagcagcaaaggctgtggctgctgctaagagcgctctagaattggttgctactctctctgatgagggaaccagtagggacaaacatttgaagaggaataagatgaaaaaacatgttcctgttcagactctgtacaataagaataacgggactgataattgtagaacagatgacgagttagctcggacgttgcatagagccattaatagctctccaagaattttgaagaactcaacctctgactcgagaaatcaaaaacataagaggctgaagaggtcttctccttctgaaaaatctaagcttcagacatggaaggtacatccctggaagggaaaccatccttctgatgagcaatggggactggttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="-" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="28053" stop="26855"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="27753" g_stop="27134" g_length="620"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="625" r_length="625" r_score="0.947"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="-" ref_id="SGN-E614869" ref_strand="+">
        <total_alignment_score>0.947</total_alignment_score>
        <cumulative_length_of_scored_exons>620</cumulative_length_of_scored_exons>
        <coverage percentage="0.992" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E614869" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="27753" e_stop="27134"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGCTTTTGCCTCCACGTAAGCGGCTTCTTGCTGGATTGAAGAAGCAGAATTCTGATGTTTACTCATCTACCCCATCCCCACCAACTGTTAATAGTCCCCCGTGTGATTTTGATATCCGTCTTAATAATCTATTGAAGTCTCATTTTGGAGACTCTAATCGATCTAATGAGGAGATTGCTGAGGCCTCAAGATTGGCAGCTCTAGAAGCTGTGAAGGCTGCAAAAGCTGCAAGAGCCATTGCAGAAGAGAAGGCTGCGAAAGCAGCAAAGGCTGTGGCTGCTGCTAAGAGCGCTCTAGAATTGGTTGCCACTCTCTCTGATGAGGGAACCAGTAGGGACAAACATTTGAAGAGGAATAAGATGAAAAAACATGTTCCTGTTCAGACGCTGTATAATAAGAATAAGGGGACTGATGATTGTAGAACAGATGAAGAGTTAGCTCGGACGTTGCATAGGGCCATTAATAGCTCTCCAAGAATTTTGAAGAACTCAACATCTGACTCAAGAAATCAAAAACATAAGAGGCTGAAGAGGTCTTCTCCTTCTGAAAAATCTAAGCTTCAGAC-TGGAA-GTACATCCGTGGAA-GGAAACTGTCCTTC-CACGAGCAAT-GGGAATGGTTT</genome_strand>
        <mrna_strand>GTGCTTTTGCCTCCACGTAAGCGGCTTCTTGCTGGATTGAAGAAGCAGAATTCTGATGTTTACTCATCTACCCCATCCCCGCCAACTGTTTGTAGCCCCCCGTGTGATTTTGATATCCGTCTTAATAATCTATTGAAGTCTCATTTTGGAGACTCTAATCGATCTTATGAGGAGATTGCTGAGGCCTCAAGATTGGCAGCTCTAGAAGCTGTGAAGGCTGCCGAAGCTGCGAGAGCCATTGCAGAAGAGAAGGCTGCGAAAGCAGCAAAGGCTGTGGCTGCTGCTAAGAGCGCTCTAGAATTGGTTGCTACTCTCTCTGATGAGGGAACCAGTAGGGACAAACATTTGAAGAGGAATAAGATGAAAAAACATGTTCCTGTTCAGACTCTGTACAATAAGAATAACGGGACTGATAATTGTAGAACAGATGACGAGTTAGCTCGGACGTTGCATAGAGCCATTAATAGCTCTCCAAGAATTTTGAAGAACTCAACCTCTGACTCGAGAAATCAAAAACATAAGAGGCTGAAGAGGTCTTCTCCTTCTGAAAAATCTAAGCTTCAGACATGGAAGGTACATCCCTGGAAGGGAAACCATCCTTCTGATGAGCAATGGGGACTGGTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E205280" ref_strand="+" ref_description="SGN-E205280 [cLEC-25-P23]">
      <seq>aataatctattgaagtctcattttggagactctaatcgatctaatgaggagattgctgaggcctcaagattggcagctctagaagctgtgaaggctgcaaaagctgcaagagccattgcagaagagaaggctgcgaaagcagcaaaggctgtggctgctgctaagagcgctctagaattggttgccactctctctgatgagggaaccagtagggacaaacatttgaagaggaataagatgaaaaaacatgttcctgttcagacgctgtataataagaataaggggactgatgattgtagaacagatgaagagttagctcggacgttgcatagggccattaatagctctccaagaattttgaagaactcaacatctgactcaagaaatcaaaaacataagaggctgaagaggtcttctccttctgaaaaatctaagcttcagactggaagta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="-" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="27930" stop="26880"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="27630" g_stop="27180" g_length="451"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="451" r_length="451" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="-" ref_id="SGN-E205280" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>451</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E205280" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="27630" e_stop="27180"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATAATCTATTGAAGTCTCATTTTGGAGACTCTAATCGATCTAATGAGGAGATTGCTGAGGCCTCAAGATTGGCAGCTCTAGAAGCTGTGAAGGCTGCAAAAGCTGCAAGAGCCATTGCAGAAGAGAAGGCTGCGAAAGCAGCAAAGGCTGTGGCTGCTGCTAAGAGCGCTCTAGAATTGGTTGCCACTCTCTCTGATGAGGGAACCAGTAGGGACAAACATTTGAAGAGGAATAAGATGAAAAAACATGTTCCTGTTCAGACGCTGTATAATAAGAATAAGGGGACTGATGATTGTAGAACAGATGAAGAGTTAGCTCGGACGTTGCATAGGGCCATTAATAGCTCTCCAAGAATTTTGAAGAACTCAACATCTGACTCAAGAAATCAAAAACATAAGAGGCTGAAGAGGTCTTCTCCTTCTGAAAAATCTAAGCTTCAGACTGGAAGTA</genome_strand>
        <mrna_strand>AATAATCTATTGAAGTCTCATTTTGGAGACTCTAATCGATCTAATGAGGAGATTGCTGAGGCCTCAAGATTGGCAGCTCTAGAAGCTGTGAAGGCTGCAAAAGCTGCAAGAGCCATTGCAGAAGAGAAGGCTGCGAAAGCAGCAAAGGCTGTGGCTGCTGCTAAGAGCGCTCTAGAATTGGTTGCCACTCTCTCTGATGAGGGAACCAGTAGGGACAAACATTTGAAGAGGAATAAGATGAAAAAACATGTTCCTGTTCAGACGCTGTATAATAAGAATAAGGGGACTGATGATTGTAGAACAGATGAAGAGTTAGCTCGGACGTTGCATAGGGCCATTAATAGCTCTCCAAGAATTTTGAAGAACTCAACATCTGACTCAAGAAATCAAAAACATAAGAGGCTGAAGAGGTCTTCTCCTTCTGAAAAATCTAAGCTTCAGACTGGAAGTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E585775" ref_strand="+" ref_description="SGN-E585775 [68239]">
      <seq>ttattcaacacaccatctttctttctccacatctctctttttctctctctctaaaaaccctaatttcaacttcttctgtaaaatgacaagatcagtttgaaagtgtgtagatgtaggaaaaagatggaagctaatgtatgtgatattaatcacttggatgccgatgtgcttttgcctccacgtaagcggcttcttgctggattgaagaagcagaattctgatgtttactcatctaccccatccccgccaactgtttgtagccccccgtgtgattttgatatccgtcttaataatctattgaagtctcattttggagactctaatcgatcttatgaggagattgctgaggcctcaagattggcagctctagaagctgtgaaggctgcaaaagctgcaagagccattgcagaagagaaggctgcgaaagcagcaaaggctgtggctgctgctaagagcgctctaaattggttgctactctctctgatgagggaaccagtagggacaaacatttgaagaggaataagcatgaaaaaacatgttcctgttcagactctggtacaataaagcaataaggggactgataattgtaggaacagatgaagagttagctcggacgttgcataggagccatttaataggctcctcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="-" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="28696" stop="26981"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28396" g_stop="28298" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="95" r_length="95" r_score="0.939"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="28297" i_stop="27824" i_length="474">
            <donor d_prob="0.969" d_score="1.00"/>
            <acceptor a_prob="0.963" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="27823" g_stop="27298" g_length="526"/>
          <reference_exon_boundary r_type="cDNA" r_start="96" r_stop="625" r_length="530" r_score="0.962"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="-" ref_id="SGN-E585775" ref_strand="+">
        <total_alignment_score>0.958</total_alignment_score>
        <cumulative_length_of_scored_exons>625</cumulative_length_of_scored_exons>
        <coverage percentage="0.967" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E585775" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28396" e_stop="28298"/>
          <exon e_start="27823" e_stop="27298"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTTCAACACACCATCTTTCTTTCTTCACATCTCTCTCTTTTTTTCTCTCTCTCTAAAAACCCTAATTTCAACTTCTTCTGTAAAATGACAAGATCAGGTATTTAGCCTTCATTGATTCTCATTGTGTTCAATTCTCGGCGTTTCATCTTAATTGCACATAAAAAATTGGGACTTTTTTTAATGTTAAATTTTTATCTAAGGAGCTAAGTTCATTTAGATTTGCATAATTCTCTTGAATCAGCTGCTAATTATCCTGGATTATGGTGAATTACGTACAAATCATCTGTTTTTGATATTGGAAGGTTGGAAAATCTTGAACTGACCTGAATTTGATTCATTTTTTAGTCTGTTGGTTTATTTTTCTGCTCTCTGCTTGTGGGTTTGGATTGAATTTGGGATTGTTTGATTGATTCGGATTGAATTGAATGGAGCGATTGAGTTTTTGGTAGTTTAGGGTTAATAGTATGTGAATCTAATGTAGGGTTTGGAAATAACAAGCAGTCAGCTGGTAGTTTTGTTTTTATAAAACTTTGTGCTAATAAAGGTGTGATTTTTAATGTTGTTTTTGTAGTTTGAAAGTGTGTAGATGTAGGAAAAAGATGGAAGCTAATGTATGTGATATTAATCACTTGGATGCCGATGTGCTTTTGCCTCCACGTAAGCGGCTTCTTGCTGGATTGAAGAAGCAGAATTCTGATGTTTACTCATCTACCCCATCCCCACCAACTGTTAATAGTCCCCCGTGTGATTTTGATATCCGTCTTAATAATCTATTGAAGTCTCATTTTGGAGACTCTAATCGATCTAATGAGGAGATTGCTGAGGCCTCAAGATTGGCAGCTCTAGAAGCTGTGAAGGCTGCAAAAGCTGCAAGAGCCATTGCAGAAGAGAAGGCTGCGAAAGCAGCAAAGGCTGTGGCTGCTGCTAAGAGCGCTCTAGAATTGGTTGCCACTCTCTCTGATGAGGGAACCAGTAGGGACAAACATTTGAAGAGGAATAAG-ATGAAAAAACATGTTCCTGTTCAGACGCT-GTATAAT-AAG-AATAAGGGGACTGATGATTGTA-GAACAGATGAAGAGTTAGCTCGGACGTTGCATAGG</genome_strand>
        <mrna_strand>TTATTCAACACACCATCTTTCTTTCTCCACA--TCTCTC--TTTTTCTCTCTCTCTAAAAACCCTAATTTCAACTTCTTCTGTAAAATGACAAGATCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGAAAGTGTGTAGATGTAGGAAAAAGATGGAAGCTAATGTATGTGATATTAATCACTTGGATGCCGATGTGCTTTTGCCTCCACGTAAGCGGCTTCTTGCTGGATTGAAGAAGCAGAATTCTGATGTTTACTCATCTACCCCATCCCCGCCAACTGTTTGTAGCCCCCCGTGTGATTTTGATATCCGTCTTAATAATCTATTGAAGTCTCATTTTGGAGACTCTAATCGATCTTATGAGGAGATTGCTGAGGCCTCAAGATTGGCAGCTCTAGAAGCTGTGAAGGCTGCAAAAGCTGCAAGAGCCATTGCAGAAGAGAAGGCTGCGAAAGCAGCAAAGGCTGTGGCTGCTGCTAAGAGCGCTCTA-AATTGGTTGCTACTCTCTCTGATGAGGGAACCAGTAGGGACAAACATTTGAAGAGGAATAAGCATGAAAAAACATGTTCCTGTTCAGACTCTGGTACAATAAAGCAATAAGGGGACTGATAATTGTAGGAACAGATGAAGAGTTAGCTCGGACGTTGCATAGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E466840" ref_strand="+" ref_description="SGN-E466840 [cPRO-26-C10]">
      <seq>aacaagctgccagctggtagttttgtttttcttaagctttgtgctaataaaggtgtgatttttaatgttgtttttgtagtttgaaagtgtgtagatgtaggaaaaagatggaagctaatgtatgtgatattaatcacttggatgccgatgtgcttttgcctccacgtaagcggcttcttgctggattgaagaagcagaattctgatgtttactcatctaccccatccccgccaactgtttgtagcccaccgtgtgattttgatatccgtcttaataatctattgaagtctcattttggagactctaatcgatcttatgaggagattgctgaggcctcaagattggcagctctagaagctgtgaaggctgcaaaagctgcaagagccattgcagaagagaaggctgcgaaagcagcaaaggctgtggctgctgctaagagcgctctagaattggttgctactctctctgatgangggaccagtagggacaaacatttgaagaagaataagatgaaaaacatgttcctgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="-" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="28202" stop="27074"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="27902" g_stop="27374" g_length="529"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="528" r_length="528" r_score="0.970"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="-" ref_id="SGN-E466840" ref_strand="+">
        <total_alignment_score>0.970</total_alignment_score>
        <cumulative_length_of_scored_exons>529</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E466840" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="27902" e_stop="27374"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACAAGCAGTCAGCTGGTAGTTTTGTTTTTATAAAACTTTGTGCTAATAAAGGTGTGATTTTTAATGTTGTTTTTGTAGTTTGAAAGTGTGTAGATGTAGGAAAAAGATGGAAGCTAATGTATGTGATATTAATCACTTGGATGCCGATGTGCTTTTGCCTCCACGTAAGCGGCTTCTTGCTGGATTGAAGAAGCAGAATTCTGATGTTTACTCATCTACCCCATCCCCACCAACTGTTAATAGTCCCCCGTGTGATTTTGATATCCGTCTTAATAATCTATTGAAGTCTCATTTTGGAGACTCTAATCGATCTAATGAGGAGATTGCTGAGGCCTCAAGATTGGCAGCTCTAGAAGCTGTGAAGGCTGCAAAAGCTGCAAGAGCCATTGCAGAAGAGAAGGCTGCGAAAGCAGCAAAGGCTGTGGCTGCTGCTAAGAGCGCTCTAGAATTGGTTGCCACTCTCTCTGATGAGGGAACCAGTAGGGACAAACATTTGAAGAGGAATAAGATGAAAAAACATGTTCCTGT</genome_strand>
        <mrna_strand>AACAAGCTGCCAGCTGGTAGTTTTGTTTTTCTTAAGCTTTGTGCTAATAAAGGTGTGATTTTTAATGTTGTTTTTGTAGTTTGAAAGTGTGTAGATGTAGGAAAAAGATGGAAGCTAATGTATGTGATATTAATCACTTGGATGCCGATGTGCTTTTGCCTCCACGTAAGCGGCTTCTTGCTGGATTGAAGAAGCAGAATTCTGATGTTTACTCATCTACCCCATCCCCGCCAACTGTTTGTAGCCCACCGTGTGATTTTGATATCCGTCTTAATAATCTATTGAAGTCTCATTTTGGAGACTCTAATCGATCTTATGAGGAGATTGCTGAGGCCTCAAGATTGGCAGCTCTAGAAGCTGTGAAGGCTGCAAAAGCTGCAAGAGCCATTGCAGAAGAGAAGGCTGCGAAAGCAGCAAAGGCTGTGGCTGCTGCTAAGAGCGCTCTAGAATTGGTTGCTACTCTCTCTGATGANGGGACCAGTAGGGACAAACATTTGAAGAAGAATAAGATG-AAAAACATGTTCCTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E562901" ref_strand="+" ref_description="SGN-E562901 [1618]">
      <seq>atgccgatgtgcttttgcctccacgtaagcggcttcttgctggattggaagaagcagaattctgatgtttactcatctaccccatccccgccaactgtttgtagccccccgtgtgattttgatatccgtcttaataatctattgaagtctcattttggagactctaatcgatcttatgaggagattgctgaggcctcaagattggcagctctagaagctgtgaaggctgca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="-" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="28061" stop="27232"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="27761" g_stop="27532" g_length="230"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="231" r_length="231" r_score="0.970"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="-" ref_id="SGN-E562901" ref_strand="+">
        <total_alignment_score>0.970</total_alignment_score>
        <cumulative_length_of_scored_exons>230</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E562901" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="27761" e_stop="27532"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGCCGATGTGCTTTTGCCTCCACGTAAGCGGCTTCTTGCTGGATT-GAAGAAGCAGAATTCTGATGTTTACTCATCTACCCCATCCCCACCAACTGTTAATAGTCCCCCGTGTGATTTTGATATCCGTCTTAATAATCTATTGAAGTCTCATTTTGGAGACTCTAATCGATCTAATGAGGAGATTGCTGAGGCCTCAAGATTGGCAGCTCTAGAAGCTGTGAAGGCTGCA</genome_strand>
        <mrna_strand>ATGCCGATGTGCTTTTGCCTCCACGTAAGCGGCTTCTTGCTGGATTGGAAGAAGCAGAATTCTGATGTTTACTCATCTACCCCATCCCCGCCAACTGTTTGTAGCCCCCCGTGTGATTTTGATATCCGTCTTAATAATCTATTGAAGTCTCATTTTGGAGACTCTAATCGATCTTATGAGGAGATTGCTGAGGCCTCAAGATTGGCAGCTCTAGAAGCTGTGAAGGCTGCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E687683" ref_strand="+" ref_description="SGN-E687683 [T3_tus_79_H02]">
      <seq>ccgttaaaaaccctaatttcaacttcttctgtaaaatgacaagttcaggtatttagccttcattgattctcattgtgttcaattctcggcgtttcatcttaattgcatataaaaaattgggactttttttaatgttaaatttttatctaaggagctaagttcatttagatttgcataattctcttgaatcagctgctaattatcctggattatggtgaattacgtacaaatcatctgtttttgatattggaaggttggaaaatcttgaactgacctgaatttgattcattttttagtctgttggtttatttttctgctctctgcttgtgggtttggattgaatttgggattgtttgattgattcggattgaattgaatggagggattgagtttttggtagtttagggttaatagtatgtgaatctaatgtagggtttggaaataacaagcagtcagctggtagttttgtttttataaaactttgtgctaataaaggtgtgatttttaatgttgtttttgtagtttgaaagtgtgtagatgtaaaaaaaagatggaagctaatgtatgtgatattaatcacttggatgccgatgtgcttttgcctccacgtaagcggcttcttgctggattgaaaaaacagaattctgaagtttactcatctaccccatcccccaccactgttaataatcccc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="-" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="28641" stop="27354"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28345" g_stop="27654" g_length="692"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="692" r_length="692" r_score="0.978"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="-" ref_id="SGN-E687683" ref_strand="+">
        <total_alignment_score>0.978</total_alignment_score>
        <cumulative_length_of_scored_exons>692</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E687683" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28345" e_stop="27654"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTCTAAAAACCCTAATTTCAACTTCTTCTGTAAAATGACAAGATCAGGTATTTAGCCTTCATTGATTCTCATTGTGTTCAATTCTCGGCGTTTCATCTTAATTGCACATAAAAAATTGGGACTTTTTTTAATGTTAAATTTTTATCTAAGGAGCTAAGTTCATTTAGATTTGCATAATTCTCTTGAATCAGCTGCTAATTATCCTGGATTATGGTGAATTACGTACAAATCATCTGTTTTTGATATTGGAAGGTTGGAAAATCTTGAACTGACCTGAATTTGATTCATTTTTTAGTCTGTTGGTTTATTTTTCTGCTCTCTGCTTGTGGGTTTGGATTGAATTTGGGATTGTTTGATTGATTCGGATTGAATTGAATGGAGCGATTGAGTTTTTGGTAGTTTAGGGTTAATAGTATGTGAATCTAATGTAGGGTTTGGAAATAACAAGCAGTCAGCTGGTAGTTTTGTTTTTATAAAACTTTGTGCTAATAAAGGTGTGATTTTTAATGTTGTTTTTGTAGTTTGAAAGTGTGTAGATGTAGGAAAAAGATGGAAGCTAATGTATGTGATATTAATCACTTGGATGCCGATGTGCTTTTGCCTCCACGTAAGCGGCTTCTTGCTGGATTGAAGAAGCAGAATTCTGATGTTTACTCATCTACCCCATCCCCACCAACTGTTAATAGTCCCC</genome_strand>
        <mrna_strand>CCGTTAAAAACCCTAATTTCAACTTCTTCTGTAAAATGACAAGTTCAGGTATTTAGCCTTCATTGATTCTCATTGTGTTCAATTCTCGGCGTTTCATCTTAATTGCATATAAAAAATTGGGACTTTTTTTAATGTTAAATTTTTATCTAAGGAGCTAAGTTCATTTAGATTTGCATAATTCTCTTGAATCAGCTGCTAATTATCCTGGATTATGGTGAATTACGTACAAATCATCTGTTTTTGATATTGGAAGGTTGGAAAATCTTGAACTGACCTGAATTTGATTCATTTTTTAGTCTGTTGGTTTATTTTTCTGCTCTCTGCTTGTGGGTTTGGATTGAATTTGGGATTGTTTGATTGATTCGGATTGAATTGAATGGAGGGATTGAGTTTTTGGTAGTTTAGGGTTAATAGTATGTGAATCTAATGTAGGGTTTGGAAATAACAAGCAGTCAGCTGGTAGTTTTGTTTTTATAAAACTTTGTGCTAATAAAGGTGTGATTTTTAATGTTGTTTTTGTAGTTTGAAAGTGTGTAGATGTAAAAAAAAGATGGAAGCTAATGTATGTGATATTAATCACTTGGATGCCGATGTGCTTTTGCCTCCACGTAAGCGGCTTCTTGCTGGATTGAAAAAACAGAATTCTGAAGTTTACTCATCTACCCCATCCCCCACCACTGTTAATAATCCCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E415867" ref_strand="+" ref_description="SGN-E415867 [STM-22-I9]">
      <seq>tctttctccacatctctctttttctctctctctaaaaaccctaatttcaacttcttctgtaaaatgacaagatcaggtatttagccttcattgattctcattgtgttcaattctcggcgtttcatcttaattgcacatcaaaattgggacttttttttattttttatttttatctaaggagctaagttcaattagatttgcataattctcttgaatcagctgctaattatcctggattatggtgaattatgtacaaatcatctgttttcgatattggaaggttggaaaatcttgaactgacctgaatttgattcattttttagtctgttgggttatttttctgctttctgcttgtgggtttggattgaattttggattttttgattgatttggattgaattgaatgaagcgattgagtttttggtagtttagggttaatagcatgtgaatctaatgtanggtttggaaataacaagctgccagctgcgtagttttgtttttcttaagctttgtgctaataaagtgtgattttaatgttgtttttgtagtttgaaagtgtgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="-" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="28673" stop="27511"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28377" g_stop="27811" g_length="567"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="561" r_length="561" r_score="0.945"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="-" ref_id="SGN-E415867" ref_strand="+">
        <total_alignment_score>0.945</total_alignment_score>
        <cumulative_length_of_scored_exons>567</cumulative_length_of_scored_exons>
        <coverage percentage="1.011" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E415867" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28377" e_stop="27811"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTTTCTTCACATCTCTCTCTTTTTTTCTCTCTCTCTAAAAACCCTAATTTCAACTTCTTCTGTAAAATGACAAGATCAGGTATTTAGCCTTCATTGATTCTCATTGTGTTCAATTCTCGGCGTTTCATCTTAATTGCACATAAAAAATTGGGACTTTTTTTAATGTTAAATTTTTATCTAAGGAGCTAAGTTCATTTAGATTTGCATAATTCTCTTGAATCAGCTGCTAATTATCCTGGATTATGGTGAATTACGTACAAATCATCTGTTTTTGATATTGGAAGGTTGGAAAATCTTGAACTGACCTGAATTTGATTCATTTTTTAGTCTGTTGGTTTATTTTTCTGCTCTCTGCTTGTGGGTTTGGATTGAATTTGGGATTGTTTGATTGATTCGGATTGAATTGAATGGAGCGATTGAGTTTTTGGTAGTTTAGGGTTAATAGTATGTGAATCTAATGTAGGGTTTGGAAATAACAAGCAGTCAGCTG-GTAGTTTTGTTTTTATAAAACTTTGTGCTAATAAAGGTGTGATTTTTAATGTTGTTTTTGTAGTTTGAAAGTGTGT</genome_strand>
        <mrna_strand>TCTTTCTCCACA--TCTCTC-T-TTTTCTCTCTCTCTAAAAACCCTAATTTCAACTTCTTCTGTAAAATGACAAGATCAGGTATTTAGCCTTCATTGATTCTCATTGTGTTCAATTCTCGGCGTTTCATCTTAATTGCACAT-CAAAATTGGGACTTTTTTTTATTTTTTATTTTTATCTAAGGAGCTAAGTTCAATTAGATTTGCATAATTCTCTTGAATCAGCTGCTAATTATCCTGGATTATGGTGAATTATGTACAAATCATCTGTTTTCGATATTGGAAGGTTGGAAAATCTTGAACTGACCTGAATTTGATTCATTTTTTAGTCTGTTGGGTTATTTTTCTGCTTTCTGCTTGTGGGTTTGGATTGAATTTTGGATTTTTTGATTGATTTGGATTGAATTGAATGAAGCGATTGAGTTTTTGGTAGTTTAGGGTTAATAGCATGTGAATCTAATGTANGGTTTGGAAATAACAAGCTGCCAGCTGCGTAGTTTTGTTTTTCTTAAGCTTTGTGCTAATAAA-GTGTGA-TTTTAATGTTGTTTTTGTAGTTTGAAAGTGTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E437882" ref_strand="+" ref_description="SGN-E437882 [cSTA-5-I24]">
      <seq>tctttctccacatctctctttttctctctctctaaaaaccctaatttcaacttcttctgtaaaatgacaagatcaggtatttagccttcattgattctcattgtgttcaattctcggcgtttcatcttaattgcacatcaaaattgggacttttttttattttttatttttatctaaggagctaagttcaattagatttgcataattctcttgaatcagctgctaattatcctggattatggtgaattatgtacaaatcatctgttttcgatattggaaggttggaaaatcttgaactgacctgaatttgattcattttttagtctgttgggttatttttctgctttctgcttgtgggtttggattgaattttggattttttgattgatttggattgaattgaatgaagcgattgagtttttggtagtttagggttaatagcatgtgaatctaatgtagggtttggaaataacaagctgccagctgcgtagttttgtttttcttaagctttgtgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="-" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="28673" stop="27559"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28377" g_stop="27859" g_length="519"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="515" r_length="515" r_score="0.946"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="-" ref_id="SGN-E437882" ref_strand="+">
        <total_alignment_score>0.946</total_alignment_score>
        <cumulative_length_of_scored_exons>519</cumulative_length_of_scored_exons>
        <coverage percentage="1.008" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E437882" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28377" e_stop="27859"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTTTCTTCACATCTCTCTCTTTTTTTCTCTCTCTCTAAAAACCCTAATTTCAACTTCTTCTGTAAAATGACAAGATCAGGTATTTAGCCTTCATTGATTCTCATTGTGTTCAATTCTCGGCGTTTCATCTTAATTGCACATAAAAAATTGGGACTTTTTTTAATGTTAAATTTTTATCTAAGGAGCTAAGTTCATTTAGATTTGCATAATTCTCTTGAATCAGCTGCTAATTATCCTGGATTATGGTGAATTACGTACAAATCATCTGTTTTTGATATTGGAAGGTTGGAAAATCTTGAACTGACCTGAATTTGATTCATTTTTTAGTCTGTTGGTTTATTTTTCTGCTCTCTGCTTGTGGGTTTGGATTGAATTTGGGATTGTTTGATTGATTCGGATTGAATTGAATGGAGCGATTGAGTTTTTGGTAGTTTAGGGTTAATAGTATGTGAATCTAATGTAGGGTTTGGAAATAACAAGCAGTCAGCTG-GTAGTTTTGTTTTTATAAAACTTTGTGC</genome_strand>
        <mrna_strand>TCTTTCTCCACA--TCTCTC-T-TTTTCTCTCTCTCTAAAAACCCTAATTTCAACTTCTTCTGTAAAATGACAAGATCAGGTATTTAGCCTTCATTGATTCTCATTGTGTTCAATTCTCGGCGTTTCATCTTAATTGCACAT-CAAAATTGGGACTTTTTTTTATTTTTTATTTTTATCTAAGGAGCTAAGTTCAATTAGATTTGCATAATTCTCTTGAATCAGCTGCTAATTATCCTGGATTATGGTGAATTATGTACAAATCATCTGTTTTCGATATTGGAAGGTTGGAAAATCTTGAACTGACCTGAATTTGATTCATTTTTTAGTCTGTTGGGTTATTTTTCTGCTTTCTGCTTGTGGGTTTGGATTGAATTTTGGATTTTTTGATTGATTTGGATTGAATTGAATGAAGCGATTGAGTTTTTGGTAGTTTAGGGTTAATAGCATGTGAATCTAATGTAGGGTTTGGAAATAACAAGCTGCCAGCTGCGTAGTTTTGTTTTTCTTAAGCTTTGTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E476531" ref_strand="+" ref_description="SGN-E476531 [cSTB-45-O11]">
      <seq>ccgcatctctctttttctctctctctaaaaaccctaatttcaacttcttctgtaaaatgacaagatcaggtatttagccttcattgattctcattgtgttgaattctcagcgtttcatcttaattgcacatcaaaattgggacttttttttattttttattttatctaaggagctaagttcaattagatttgcataattctcttgaatcagctgctaattatcctggattatggtgaattatgtacaaatcatctgtttttgatattggaaggttggaaaatcttgaactgacctgaatttgattcattttttagtctgttgggttatttttctgctttctgtttgtgggcttggattgaattttggattttttgattgatttggattgaattgaatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="-" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="28664" stop="27667"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28367" g_stop="27967" g_length="401"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="398" r_length="398" r_score="0.943"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="-" ref_id="SGN-E476531" ref_strand="+">
        <total_alignment_score>0.943</total_alignment_score>
        <cumulative_length_of_scored_exons>401</cumulative_length_of_scored_exons>
        <coverage percentage="1.008" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E476531" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28367" e_stop="27967"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATCTCTCTCTTTTTTTCTCTCTCTCTAAAAACCCTAATTTCAACTTCTTCTGTAAAATGACAAGATCAGGTATTTAGCCTTCATTGATTCTCATTGTGTTCAATTCTCGGCGTTTCATCTTAATTGCACATAAAAAATTGGGACTTTTTTTAATGTTAAATTTTTATCTAAGGAGCTAAGTTCATTTAGATTTGCATAATTCTCTTGAATCAGCTGCTAATTATCCTGGATTATGGTGAATTACGTACAAATCATCTGTTTTTGATATTGGAAGGTTGGAAAATCTTGAACTGACCTGAATTTGATTCATTTTTTAGTCTGTTGGTTTATTTTTCTGCTCTCTGCTTGTGGGTTTGGATTGAATTTGGGATTGTTTGATTGATTCGGATTGAATTGAATG</genome_strand>
        <mrna_strand>CCGC-ATCTCTCTTTTTCTCTCTCTCTAAAAACCCTAATTTCAACTTCTTCTGTAAAATGACAAGATCAGGTATTTAGCCTTCATTGATTCTCATTGTGTTGAATTCTCAGCGTTTCATCTTAATTGCACAT-CAAAATTGGGACTTTTTTTTATTTTTTA-TTTTATCTAAGGAGCTAAGTTCAATTAGATTTGCATAATTCTCTTGAATCAGCTGCTAATTATCCTGGATTATGGTGAATTATGTACAAATCATCTGTTTTTGATATTGGAAGGTTGGAAAATCTTGAACTGACCTGAATTTGATTCATTTTTTAGTCTGTTGGGTTATTTTTCTGCTTTCTGTTTGTGGGCTTGGATTGAATTTTGGATTTTTTGATTGATTTGGATTGAATTGAATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E322055" ref_strand="+" ref_description="SGN-E322055 [cTOB-29-M7]">
      <seq>taaaaaccctaatttcaacttcttctgtaaaatgacaagatcaggtatttagccttcattgattctcattgtgttcaattctcggcgtttcatcttaattgcacataaaaaattgggactttttttaatgttaaatttttatctaaggagctaagttcatttagatttgcataattctcttgaatcagctgctaattatcctggattatggtga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="-" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="28641" stop="27828"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28341" g_stop="28128" g_length="214"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="214" r_length="214" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="-" ref_id="SGN-E322055" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>214</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E322055" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28341" e_stop="28128"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAAAACCCTAATTTCAACTTCTTCTGTAAAATGACAAGATCAGGTATTTAGCCTTCATTGATTCTCATTGTGTTCAATTCTCGGCGTTTCATCTTAATTGCACATAAAAAATTGGGACTTTTTTTAATGTTAAATTTTTATCTAAGGAGCTAAGTTCATTTAGATTTGCATAATTCTCTTGAATCAGCTGCTAATTATCCTGGATTATGGTGA</genome_strand>
        <mrna_strand>TAAAAACCCTAATTTCAACTTCTTCTGTAAAATGACAAGATCAGGTATTTAGCCTTCATTGATTCTCATTGTGTTCAATTCTCGGCGTTTCATCTTAATTGCACATAAAAAATTGGGACTTTTTTTAATGTTAAATTTTTATCTAAGGAGCTAAGTTCATTTAGATTTGCATAATTCTCTTGAATCAGCTGCTAATTATCCTGGATTATGGTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E542821" ref_strand="+" ref_description="SGN-E542821 [TUS-64-F3]">
      <seq>gatagccgatcaaaacctaaaccccaaatcaatttccccgccgatcatgcactgctcttcccattaccgaattcttgtaaattcttatttaaggaaaaaaaaaaggaagagattgttgtctttttgaatattcaagaatgttttctttttcaaaagaaaattaggttcttattttcgtggtgtgtgttaaggatgttgaagaaattagttttaacttttcaggtcagtaatgcagttcgcacaggggatttgagttttgtttcagaaaaactgtatctgcagacaagatggtgaagagaaactgaaatttactgtttgattccaggaaaccctaaattgattaattttctcgttgatgtcaaattggtattcttccatgcactggttttaaagaaaatattcaagaaactgttgtctaagttacattggtattcataggaaattgttgttttcaagaatatattggtatagaacttcaagaaatcttttcttttttaagaaaatcaaagaattatgttgtcaaaaaagcatgtttacagaacgacaaatgtttgtaacttgggatttatgactgttgacaaggactgctggtttgctacaaggactgctgtttgctaaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="+" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="29926" stop="31145"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30226" g_stop="30845" g_length="620"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="620" r_length="620" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="+" ref_id="SGN-E542821" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>620</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E542821" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30226" e_stop="30845"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATAGCCGATCAAAACCTAAACCCCAAATCAATTTCCCCGCCGATCATGCACTGCTCTTCCCATTACCGAATTCTTGTAAATTCTTATTTAAGGAAAAAAAAAAGGAAGAGATTGTTGTCTTTTTGAATATTCAAGAATGTTTTCTTTTTCAAAAGAAAATTAGGTTCTTATTTTCGTGGTGTGTGTTAAGGATGTTGAAGAAATTAGTTTTAACTTTTCAGGTCAGTAATGCAGTTCGCACAGGGGATTTGAGTTTTGTTTCAGAAAAACTGTATCTGCAGACAAGATGGTGAAGAGAAACTGAAATTTACTGTTTGATTCCAGGAAACCCTAAATTGATTAATTTTCTCGTTGATGTCAAATTGGTATTCTTCCATGCACTGGTTTTAAAGAAAATATTCAAGAAACTGTTGTCTAAGTTACATTGGTATTCATAGGAAATTGTTGTTTTCAAGAATATATTGGTATAGAACTTCAAGAAATCTTTTCTTTTTTAAGAAAATCAAAGAATTATGTTGTCAAAAAAGCATGTTTACAGAACGACAAATGTTTGTAACTTGGAATTTATGACTGTTGACAAGAACTGCT-GTTTGCTAACAAGGACTGCTGTTTGCTAACA</genome_strand>
        <mrna_strand>GATAGCCGATCAAAACCTAAACCCCAAATCAATTTCCCCGCCGATCATGCACTGCTCTTCCCATTACCGAATTCTTGTAAATTCTTATTTAAGGAAAAAAAAAAGGAAGAGATTGTTGTCTTTTTGAATATTCAAGAATGTTTTCTTTTTCAAAAGAAAATTAGGTTCTTATTTTCGTGGTGTGTGTTAAGGATGTTGAAGAAATTAGTTTTAACTTTTCAGGTCAGTAATGCAGTTCGCACAGGGGATTTGAGTTTTGTTTCAGAAAAACTGTATCTGCAGACAAGATGGTGAAGAGAAACTGAAATTTACTGTTTGATTCCAGGAAACCCTAAATTGATTAATTTTCTCGTTGATGTCAAATTGGTATTCTTCCATGCACTGGTTTTAAAGAAAATATTCAAGAAACTGTTGTCTAAGTTACATTGGTATTCATAGGAAATTGTTGTTTTCAAGAATATATTGGTATAGAACTTCAAGAAATCTTTTCTTTTTTAAGAAAATCAAAGAATTATGTTGTCAAAAAAGCATGTTTACAGAACGACAAATGTTTGTAACTTGGGATTTATGACTGTTGACAAGGACTGCTGGTTTGCT-ACAAGGACTGCTGTTTGCTAACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E301808" ref_strand="+" ref_description="SGN-E301808 [cLEW-25-H1]">
      <seq>atagccgatcaaaacctaatccccaaatcaatttccccgccgatcatgcactgctcttcccattaccgaattcttgtaaattcttatttaaggaaaaaaaaaaggaagagattgttgtctttttgaatattcaagaatgttttctttttcaaaagaaaattaggttcttattttcgtggtgtgtgttaaggatgttgaacaaattagttttaacttttcaggtcagtaatgcagttcgcacaggggatttgagttttgtttcagaaaaactgtatctgcagacaagatggtgaagagaaactgaaatttactgtttgattccaggaaaccctaaattgattaattttctcgttgatgtcaaattggtattcttccatgcactggttttaaagaaaatattcaagaaactgttgtctaagttacattggtattcataggaaattgttgttttcaagaatatattggtatagaacttcaagaaatcttttcttttttaagaaaatcaaagaattatgttgtcaaaaaagcatgtttacagaacgacaaatgtttgtaacttggaatttatgactgttgacaagaactgctgtttgctaacaaggactgctgtttgctaacaaggatttgttgggatttttcttttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="+" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="29927" stop="31170"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30227" g_stop="30870" g_length="644"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="644" r_length="644" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="+" ref_id="SGN-E301808" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>644</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E301808" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30227" e_stop="30870"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATAGCCGATCAAAACCTAAACCCCAAATCAATTTCCCCGCCGATCATGCACTGCTCTTCCCATTACCGAATTCTTGTAAATTCTTATTTAAGGAAAAAAAAAAGGAAGAGATTGTTGTCTTTTTGAATATTCAAGAATGTTTTCTTTTTCAAAAGAAAATTAGGTTCTTATTTTCGTGGTGTGTGTTAAGGATGTTGAAGAAATTAGTTTTAACTTTTCAGGTCAGTAATGCAGTTCGCACAGGGGATTTGAGTTTTGTTTCAGAAAAACTGTATCTGCAGACAAGATGGTGAAGAGAAACTGAAATTTACTGTTTGATTCCAGGAAACCCTAAATTGATTAATTTTCTCGTTGATGTCAAATTGGTATTCTTCCATGCACTGGTTTTAAAGAAAATATTCAAGAAACTGTTGTCTAAGTTACATTGGTATTCATAGGAAATTGTTGTTTTCAAGAATATATTGGTATAGAACTTCAAGAAATCTTTTCTTTTTTAAGAAAATCAAAGAATTATGTTGTCAAAAAAGCATGTTTACAGAACGACAAATGTTTGTAACTTGGAATTTATGACTGTTGACAAGAACTGCTGTTTGCTAACAAGGACTGCTGTTTGCTAACAAGGATTTGTTGGGATTTTTCTTTTT</genome_strand>
        <mrna_strand>ATAGCCGATCAAAACCTAATCCCCAAATCAATTTCCCCGCCGATCATGCACTGCTCTTCCCATTACCGAATTCTTGTAAATTCTTATTTAAGGAAAAAAAAAAGGAAGAGATTGTTGTCTTTTTGAATATTCAAGAATGTTTTCTTTTTCAAAAGAAAATTAGGTTCTTATTTTCGTGGTGTGTGTTAAGGATGTTGAACAAATTAGTTTTAACTTTTCAGGTCAGTAATGCAGTTCGCACAGGGGATTTGAGTTTTGTTTCAGAAAAACTGTATCTGCAGACAAGATGGTGAAGAGAAACTGAAATTTACTGTTTGATTCCAGGAAACCCTAAATTGATTAATTTTCTCGTTGATGTCAAATTGGTATTCTTCCATGCACTGGTTTTAAAGAAAATATTCAAGAAACTGTTGTCTAAGTTACATTGGTATTCATAGGAAATTGTTGTTTTCAAGAATATATTGGTATAGAACTTCAAGAAATCTTTTCTTTTTTAAGAAAATCAAAGAATTATGTTGTCAAAAAAGCATGTTTACAGAACGACAAATGTTTGTAACTTGGAATTTATGACTGTTGACAAGAACTGCTGTTTGCTAACAAGGACTGCTGTTTGCTAACAAGGATTTGTTGGGATTTTTCTTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E317731" ref_strand="+" ref_description="SGN-E317731 [cTOA-30-C11]">
      <seq>tgaaattggctaccaattactacacaactgtactgaccaaattcagaactgggtttggatctgcaacattcattcacaggcttcaagatcatttaccaggaacttaaatcttattcacaagaaacctacatttgtcacacttcttgaggcagctagtctctttgccttggtggatagtgctgagttcaaatgatgccatacagcagtcattatggagcttgctttgtttcctcagggccctcaaaaaaacacgggcaactactttatcatgggaaagaaggaatcattccttcaatgacagtcaacttcactagaaccatggaccgggagtgaggtcatttctgctattgatctggttctcacgagatggactggtgctgatgggagaaagatatgtgatgatgacctactttgtgtacatgcttctccttctccgttgtcgctattgcccagtggttttcggattcatttgagtaacctcaacaaattaaatgcaagtgatggttcattcaaactctcaggatacatctcacttcagatttggaggttggaagcacaacttttgacctattaaatatgccaacactgttgatctttgacattattctagagactcaaggtttaaggatagtttttcatgtatcctttgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="+" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="31738" stop="35324"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="32038" g_stop="32136" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="99" r_length="99" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="32137" i_stop="32292" i_length="156">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.947" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="32293" g_stop="32341" g_length="49"/>
          <reference_exon_boundary r_type="cDNA" r_start="100" r_stop="148" r_length="49" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="32342" i_stop="33457" i_length="1116">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="33458" g_stop="33658" g_length="201"/>
          <reference_exon_boundary r_type="cDNA" r_start="149" r_stop="349" r_length="201" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="33659" i_stop="33765" i_length="107">
            <donor d_prob="0.943" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="33766" g_stop="33812" g_length="47"/>
          <reference_exon_boundary r_type="cDNA" r_start="350" r_stop="396" r_length="47" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="33813" i_stop="34770" i_length="958">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="34771" g_stop="35024" g_length="254"/>
          <reference_exon_boundary r_type="cDNA" r_start="397" r_stop="650" r_length="254" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="+" ref_id="SGN-E317731" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>650</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E317731" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="32038" e_stop="32136"/>
          <exon e_start="32293" e_stop="32341"/>
          <exon e_start="33458" e_stop="33658"/>
          <exon e_start="33766" e_stop="33812"/>
          <exon e_start="34771" e_stop="35024"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAAATTGGCTACCAATTACTACACAACTGTACTGACCAAATTCAGAACTGGGTTTGGATCTGCAACATTCATTCACAGGCTTCAAGATCATTTACCAGGTAAGTTGCTATCTTTGTCTGGATTTTTATTACACAACCAGTTTGTGGAACTTAGTGAAATTGCCATTCACCAGAATCCATTGCACTAAATTTTGCAAAATTCATTTAAGTTGTTCCTAACTCTGAGCATGAAGTAATATGTTTTGGTTAAAGCAGGAACTTAAATCTTATTCACAAGAAACCTACATTTGTCACACTTCTTGAGGTAATATTCTCTACTAGTCTGTGTCATATTATTTATTCAAATGGAGGTACATGCAAACCATTTGCAAATCAGTCTTAAAAGGTAAAAGGTATTATAGTACTCCCTCCGTTTCAAAAAGGATGGCCTAGTTTGACTTGGAACGGAGTTTAAGAAAAGAAAGAAACTTTTTAATCTTGTGGTTCTAAATTAAAGTTATGTCAAATGTACCAAAATGTGGTCCTTTAATCTTGTTGTCTTAAACATTGCCATGTGAAAAGTTAAAGTGTTTCCAAAAAAGGAAAGGGGTCATTCTTTTTGAAATAAACTAAAAAGGAAATAGGGTCATTCTTTTTGAAACGGAGGGAGTATTGATTGTAGTTGTTAATGAAGGATTCAGGAACTCATGTTCACTATTAGGAAATAAGAATTGGGATTACGAATTATTGGGGATAAAGCTACGCTGAGGTAGTATAAATACACAAGGGTTGGGATAGATTGCTCACCTATATTCTCAAACCTCTTACTACTCTTCTTAGGTTTATTCACTTCAAATGTTGCTCCCTCTTGTAAGATATATGCCTGTCTCTGGAAAACGAAGCATGACAAACACCCTCGCTCTTGTAGGATATATGCCTGTTTCTGGAAAATGAAGCATGACAAACACTTCTTCTCAGGCTAGTTATTACATCCTGAGGTATCAATAGCACAATTATCAGTTCTGTGCTCCTTCCTGTTGAAAGCATGAAGGATTTTCAAGGGTTTAGGCCTTTCATGTGTCATTGCGCATGCTCTCTTTAGGTGCATTTTATGTTTTAATTGAGATAATTATAGAAAATGAATTACTAATAGTAACTTCTAAGGGAAGAGCTTTTCTTTTTCTAGTGCCATCAGTTACAAGATTCTCTTGCAGGTGTTCCATAAGAAAATAGTTGGTGCTTAGGTAACTTTTAGACCAGCTTTCGGAAACAGTATATGTGCCTGTTTCTTTCATCTTTCGTTATATTTCCTTTTGTCTGGACATTCGAACTATGGTGTTCCCTTCTTCTGTTGAATATACAGAAGCAATCCCCCTTTTTCTCCTTTTCGTATGGCTCCTCAAAAACTTCTCCAAGTGACTTAAAAAGCAAACTTTCTCAGGCAGCTAGTCTCTTTGCCTTGGTGGATAGTGCTGAGTTCAAATGATGCCATACAGCAGTCATTATGGAGCTTGCTTTGTTTCCTCAGGGCCCTCAAAAAAACACGGGCAACTACTTTATCATGGGAAAGAAGGAATCATTCCTTCAATGACAGTCAACTTCACTAGAACCATGGACCGGGAGTGAGGTCATTTCTGCTATTGTAAGTATTAATCTCTCTGATATTGTCCTAATGCATTTTGATGTGCGGAAAGTTCTGCTCAATTTATTATTTTACTTCATCATGTGAAGTTGTACTTTCTTTTGAAGGATCTGGTTCTCACGAGATGGACTGGTGCTGATGGGAGAAAGATATGGTAATCTTTTTGCAAAATGCTGGACTGACATCATATTTTCTATTGTATTGATGCTGCTGTACATAAGATCTTTTCCTGATAGCTAGGATTTTCATAACTTGGAATTGTTGTTGTAGTCTATAGGATTGCAAGCATTACTCAACTGATAGGCTGTTTGATGATTCGTGAATTGCATTTCTCAACTTATAGGCTTCCTCTTTGTCTGGCCATTTTAACTATGGTTTCGTATGATTGCTTTACACTAGCTACATTAAAATACGACTATTAAAATGAATGGCATGCTTTCCCAGCAAGTTTTGGCTTTAAAGGAGAGGCTCTGAGCTCTATTTCTGATGTTTGTTTGTTGTAAATTGTTACTAAAACTTACGGGAAGCCAAATGGATATTGTAAGTTCCAAAGGTAAATTTCTGTAGAGTTTTAGTTGGTAGCATCCATTAGGATAGGTATAAAACTACTAACTTGGTCTTTCTTCTAGGCATTGTTTACAGGACGGCAAGTGCTTGTACTTTGGAATTGATAATTGTAGGCAAAATGTTTGTACAACAGATAATTCTACATAAGCTTACCTGATACAAGAGTTGACCGTTGTTTGCTAATAAGGGAATTTCTTGGGATTTTTCTCTTTGCAATCATCGTTCGTGATGTATTTTAAACCAATCAGTTCGAATGAAGAAAATGCACTCTAAGTACTTCTAGTTTTCTCACAATTGAAACAAATAAAAAATAGTGGTTTACATACGTAACTTTCTGATTGATCTTTTGGTTTGCATATATAATCTGGAAACCCAAGGAGTGTCTTGCATTATCTGTAAGTGTCTTGTCTGAGAACCACCTTTGTGCATCTCAGTGTCTCGTTCTAAAATCTTTGATATTGTAAGGTCCGTCTTTATTAATACCGGCTAATTTTTGTAAGGATATGTCTTGTCTGGTTTCTTAGATTTTGGTCGTTTGTGTGCAGTGATGATGACCTACTTTGTGTACATGCTTCTCCTTCTCCGTTGTCGCTATTGCCCAGTGGTTTTCGGATTCATTTGAGTAACCTCAACAAATTAAATGCAAGTGATGGTTCATTCAAACTCTCAGGATACATCTCACTTCAGATTTGGAGGTTGGAAGCACAACTTTTGACCTATTAAATATGCCAACACTGTTGATCTTTGACATTATTCTAGAGACTCAAGGTTTAAGGATAGTTTTTCATGTATCCTTTGT</genome_strand>
        <mrna_strand>TGAAATTGGCTACCAATTACTACACAACTGTACTGACCAAATTCAGAACTGGGTTTGGATCTGCAACATTCATTCACAGGCTTCAAGATCATTTACCAG............................................................................................................................................................GAACTTAAATCTTATTCACAAGAAACCTACATTTGTCACACTTCTTGAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCTAGTCTCTTTGCCTTGGTGGATAGTGCTGAGTTCAAATGATGCCATACAGCAGTCATTATGGAGCTTGCTTTGTTTCCTCAGGGCCCTCAAAAAAACACGGGCAACTACTTTATCATGGGAAAGAAGGAATCATTCCTTCAATGACAGTCAACTTCACTAGAACCATGGACCGGGAGTGAGGTCATTTCTGCTATT...........................................................................................................GATCTGGTTCTCACGAGATGGACTGGTGCTGATGGGAGAAAGATATG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATGATGACCTACTTTGTGTACATGCTTCTCCTTCTCCGTTGTCGCTATTGCCCAGTGGTTTTCGGATTCATTTGAGTAACCTCAACAAATTAAATGCAAGTGATGGTTCATTCAAACTCTCAGGATACATCTCACTTCAGATTTGGAGGTTGGAAGCACAACTTTTGACCTATTAAATATGCCAACACTGTTGATCTTTGACATTATTCTAGAGACTCAAGGTTTAAGGATAGTTTTTCATGTATCCTTTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E206288" ref_strand="+" ref_description="SGN-E206288 [cLEC-23-I11]">
      <seq>tttgcatagtccattatgcctgttcttggtttctcgtaaatttccttatgatgcgtttactttaaataattgttttatctttagggattgttttttgttggactcagtagcaaacataaaaactcagcataaacttccacataaatagtataatatttgttggctgcgtaagtcatagtaataactgcataactatgtatcattcagttatacgcataagaaaatataagctcgacaggacatatgcagcgtctggttggtggtattaactttcattattaatatccttgtgacttatgtgagaatctatatgttatttacgtgggatggaatatggaataagaaaacacatgccaacaatgcacggatgagtatttacaggcaaaaattccctttatagtagataatccccgcatagcatatcttatttactattcactgcgctaaaatcccttcatcatcagttactgcataacaatttttacattattatcactgcataaacattccctctatgattcttacttaaccaaataatttcttaactcttttgtattgctgttttgtgatattactgaagaaaaggattatgatcttttgtttgattctaccatttatcttcgctgagcattacacccattatcatgttctacagcatgatgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="+" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="35529" stop="36791"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="35829" g_stop="36491" g_length="663"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="663" r_length="663" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="+" ref_id="SGN-E206288" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>663</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E206288" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="35829" e_stop="36491"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGCATAGTCCATTATGCCTGTTCTTGGTTTCTCGTAAATTTCCTTATAATGCGTTTACTTTAAATAATTGTTTTATCTTTAGGGATTGTTTTTTGTTGGACTCAGTAGCAAACATAAAAACTCAGCATAAACTTCCACATAAATAGTATAATATTTGTTGGCTGCGTAAGTCATAGTAATAACTGCATAACTATGTATCATTCAGTTATACGCATAAGAAAATATAAGCTCGACAGGACATATGCAGCGTCTGGTTGGTGGTATTAACTTTCATTATTAATATCCTTGTGACTTATGTGAGAATCTATATGTTATTTACGTGGGATGGAATATGGAATAAGAAAACACATGCCAACAATGCACGGATGAGTATTTACAGGCAAAAATTCCCTTTATAGTAGATAATCCCCGCATAGCATATCTTATTTACTATTCACTGCGCTAAAATCCCTTCATCATCAGTTACTGCATAACAATTTTTACATTATTATCACTGCATAAACATTCCCTCTATGATTCTTACTTAACCAAATAATTTCTTAACTCTTTTGTATTGCTGTTTTGTGATATTACTGAAGAAAAGGATTATGATCTTTTGTTTGATTCTACCATTTATCTTCGCTGAGCATTACACCCATTATCATGTTCTACAGCATGATGC</genome_strand>
        <mrna_strand>TTTGCATAGTCCATTATGCCTGTTCTTGGTTTCTCGTAAATTTCCTTATGATGCGTTTACTTTAAATAATTGTTTTATCTTTAGGGATTGTTTTTTGTTGGACTCAGTAGCAAACATAAAAACTCAGCATAAACTTCCACATAAATAGTATAATATTTGTTGGCTGCGTAAGTCATAGTAATAACTGCATAACTATGTATCATTCAGTTATACGCATAAGAAAATATAAGCTCGACAGGACATATGCAGCGTCTGGTTGGTGGTATTAACTTTCATTATTAATATCCTTGTGACTTATGTGAGAATCTATATGTTATTTACGTGGGATGGAATATGGAATAAGAAAACACATGCCAACAATGCACGGATGAGTATTTACAGGCAAAAATTCCCTTTATAGTAGATAATCCCCGCATAGCATATCTTATTTACTATTCACTGCGCTAAAATCCCTTCATCATCAGTTACTGCATAACAATTTTTACATTATTATCACTGCATAAACATTCCCTCTATGATTCTTACTTAACCAAATAATTTCTTAACTCTTTTGTATTGCTGTTTTGTGATATTACTGAAGAAAAGGATTATGATCTTTTGTTTGATTCTACCATTTATCTTCGCTGAGCATTACACCCATTATCATGTTCTACAGCATGATGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E542820" ref_strand="+" ref_description="SGN-E542820 [TUS-64-F3](-)">
      <seq>tagcaagaaatggtcatacctgaaactaattaccaattactacacaactatgctgaccaaattttaaaactggggttggatctgcaacattcattctcaagcctcaagatcatttactagcattcattgaagttgaacctaactctagcatgaactgaaaagtaacggtgacagccaattcaaaagtaaacacactactagctaaacaaattgaggctgtgacactgaggtaatttttttgctttctgcttgtgggtttaaaccttgatgctctctcgcctccaccaacccccacataagcaaaagagaaggaacaaggtgcatatgtttggagatgcattgtcgccttcagagtgtagcaataattcatcacattgaaatataatttggatctagagcacaatacatctaatacagattcgacaaataaatgtactttacccgattacagatccaatcgtaccatttctgtaagtttatctatttatacctacttagagatacgattaatattgtcaaactcaaaatatacactccatgggaagcactaaacactataggtaaatcgatattgaatttacattttattgacaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="+" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="36447" stop="38085"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36629" g_stop="36640" g_length="12"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="12" r_length="12" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36641" i_stop="36747" i_length="107">
            <donor d_prob="0.934" d_score="0.00"/>
            <acceptor a_prob="0.298" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="36748" g_stop="36855" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="13" r_stop="120" r_length="108" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="36856" i_stop="36957" i_length="102">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.973" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="36958" g_stop="37066" g_length="109"/>
          <reference_exon_boundary r_type="cDNA" r_start="121" r_stop="229" r_length="109" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="37067" i_stop="37254" i_length="188">
            <donor d_prob="0.954" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="37255" g_stop="37343" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="230" r_stop="318" r_length="89" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="37344" i_stop="37506" i_length="163">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="37507" g_stop="37790" g_length="284"/>
          <reference_exon_boundary r_type="cDNA" r_start="319" r_stop="602" r_length="284" r_score="0.982"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="+" ref_id="SGN-E542820" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>602</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E542820" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36629" e_stop="36640"/>
          <exon e_start="36748" e_stop="36855"/>
          <exon e_start="36958" e_stop="37066"/>
          <exon e_start="37255" e_stop="37343"/>
          <exon e_start="37507" e_stop="37790"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGCAAGAAATGGTACGTTTATGGTCATCTAATGTGAAATAGATTTGCCCTGTGCTGCTGTTGGCTATAAGGGAAAGACTTGAAACTCTTTTTCCTCGGCCTTTGACATGCCTTTGCAGGTCATACCTGAAACTAATTACCAATTACTACACAACTATGCTGACCAAATTTTAAAACTGGGGTTGGATCTGCAACATTCATTCTCAAGCCTCAAGATCATTTACTAGGTAAGTTACGGATCTTTGTTTAAATTTTCATCAGAACCAATCTATGGAGCTTTTGATAAAAATTGCCATTTACCTGAAATCCTATTCCACTAAATTTTGCAGCATTCATTGAAGTTGAACCTAACTCTAGCATGAACTGAAAAGTAACGGTGACAGCCAATTCAAAAGTAAACACACTACTAGCTAAACAAATTGAGGCTGTGACACTGAGGTCAGTTGAAGTTAATTATTCTTAATATAATATATAGCAAGTGTTAAATGCTTAAACTGCCTATTACTGTTGTTCTTTCATTAACTACACACACTATTATCCTGTATTATGTATAAGTCCTTTGTTTTTGACAAGATTGGAAAATCTTGAACTGACCTGAATTTGATTGATTTTTTTTCGTCTGTTGGGTAATTTTTTTGCTTTCTGCTTGTGGGTTTAAACCTTGATGCTCTCTCGCCTCCACCAACCCCCACATAAGCAAAAGAGAAGGAACAAGGTATTTTTCTTTCCTCCTGGTGTCTTTGTTTTCATTTGTATTGGAACGATAAATCTGATATGGATAGAGTAAGAACAAATACAGAGGAATGAGGATCAGTATAGCAGGCCAACTAATTTTTGTGTGAAGCATAATTGATGGATTGATTTATTTATCTTCGTAGGTGCATATGTTTGGAGATGCATTGTCGCCTTCAGAGTGTAGCAATAATTCATCACATTGAAATATAATTTGGATCTAGAGCACAATACATCTAATACAGATTCGACAAATAAATGTACTTTACCCGATTACAGATCCAATCGTACCATTTCTGTAAGTTTATCTATTTATACCTACTTAGAGATACGATTAATATTGTCAAACTCAAAATATACACTCCATGGGAAGCACTAAACACTATAGGTAAATCGATATTGAATTTACATTTTATTGACAAAAAGTTGT</genome_strand>
        <mrna_strand>TAGCAAGAAATG...........................................................................................................GTCATACCTGAAACTAATTACCAATTACTACACAACTATGCTGACCAAATTTTAAAACTGGGGTTGGATCTGCAACATTCATTCTCAAGCCTCAAGATCATTTACTAG......................................................................................................CATTCATTGAAGTTGAACCTAACTCTAGCATGAACTGAAAAGTAACGGTGACAGCCAATTCAAAAGTAAACACACTACTAGCTAAACAAATTGAGGCTGTGACACTGAG............................................................................................................................................................................................GTAATTTTTTTGCTTTCTGCTTGTGGGTTTAAACCTTGATGCTCTCTCGCCTCCACCAACCCCCACATAAGCAAAAGAGAAGGAACAAG...................................................................................................................................................................GTGCATATGTTTGGAGATGCATTGTCGCCTTCAGAGTGTAGCAATAATTCATCACATTGAAATATAATTTGGATCTAGAGCACAATACATCTAATACAGATTCGACAAATAAATGTACTTTACCCGATTACAGATCCAATCGTACCATTTCTGTAAGTTTATCTATTTATACCTACTTAGAGATACGATTAATATTGTCAAACTCAAAATATACACTCCATGGGAAGCACTAAACACTATAGGTAAATCGATATTGAATTTACATTTTATTGACAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E206966" ref_strand="+" ref_description="SGN-E206966 [cLEC-33-E24]">
      <seq>tccctcattaaacgcaccgtctccttctctatcaaacttttcttttcccccaaaaaattatagagctctgtaatttttgttttgatattttctcacaaaattcgaaaacgtagttttggaattttcagatcacgattgtttgattcagtgattaacaatgtcttgttcatcgtcgacggcgtctgaggatgaagatgaaggattcgattcttaccggaagggaggctaccatgccgtgagagtcggcgattcattttccggtggccgatatatggcgcaacgaaaactcggctggggagagttttccaccgtttggctcgcttatgatactcaattatccggctttgttgccttgaagatccagaaaagtgcaccacaatttgctcaagcagcttttcatgaaattgaaatcctttctgcgattgccaatggtgatcaatctaacagtaaatacgttgtacggcttattgaccattttaagcacacaggtcctaatggacagcacatatgcatggcttttgaatttcttggtgatagcttat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="-" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="41531" stop="39650"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="41231" g_stop="40892" g_length="340"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="340" r_length="340" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="40891" i_stop="40152" i_length="740">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="40151" g_stop="39950" g_length="202"/>
          <reference_exon_boundary r_type="cDNA" r_start="341" r_stop="542" r_length="202" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="-" ref_id="SGN-E206966" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>542</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E206966" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="41231" e_stop="40892"/>
          <exon e_start="40151" e_stop="39950"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCCTCATTAAACGCACCGTCTCCTTCTCTATCAAACTTTTCTTTTCCCCCAAAAAATTATAGAGCTCTGTAATTTTTGTTTTGATATTTTCTCACAAAATTCGAAAACGTAGTTTTGGAATTTTCAGATCACGATTGTTTGATTCAGTGATTAACAATGTCTTGTTCATCGTCGTCGGCGTCTGAGGATGAAGATGAAGGATTCGATTCTTACCGGAAGGGAGGCTACCATGCCGTGAGAGTCGGCGATTCATTTTCCGGTGGCCGATATATGGCGCAACGAAAACTCGGCTGGGGAGAGTTTTCCACCGTTTGGCTCGCTTATGATACTCAATTATCCGTGAGTTTTGTTTTCGTTACTATTTCTCTTCGATTTTTCGTCTACCGAATTGTTATTTTATCATTATTACACTTTTTTTTTATAGATAATTATTACGATCAATTTTCGTCTACCGAAGTGCTATTTTATCATAAATAATTGCTGCGAAGAACTGTATTATTTGTACTCATTACTATTATTACAAAAAAATAGATGTTTGTCACTGTTCAAGCAATGCATTATCTTAGTTTAAATAAGCCAGCAGCAAATGATATTTTACTGCTTTCAAAACAAGTGCTTGTTGCATCTGTGTCATTCTGGTTCATTGAAAAATCATATTTGATGAAAGAATAATTGTAGTATTCTAATTAGCATTATTGCCTATGTTCTTGACAGACATGACAATGAATATGCATGGCCTCTTTCCAAGTATGTGAGAGCCGTTACACATCAACAAGTGTTAGGTCCTTGATGATAATAAGCATGATACCATGTACAGTTTAAAAACTAATGTTTTAGGTACCTGTCAATTGTATGAGATGAATCCATTCTCCATTAATGAATCATGGTCTTTTATAATGGTGCATTGCTTGTAATGCTTTTCCTAACAATAAGGGGATGAGAATTATGTTCTCCCTTATATTGGTGCATTGCTTGTAATCTTTTCCTCACAATAAGGGTATGAGTTTGGAAGTTCATAAGGATCTTTAAGAACTTCGAAATTTGGAGCTTATGTCATTACTATGTTTGTTTTCTCCTAGGGTTTTGTTGCCTTGAAGATCCAGAAAAGTGCACCACAATTTGCTCAAGCAGCTTTTCATGAAATTGAAATCCTTTCTGCGATTGCCAATGGTGATCAATCTAACAGTAAATACGTTGTACGGCTTATTGACCATTTTAAGCACACAGGTCCTAATGGACAGCACATATGCATGGTTTTTGAATTTCTTGGTGATAGCTTAT</genome_strand>
        <mrna_strand>TCCCTCATTAAACGCACCGTCTCCTTCTCTATCAAACTTTTCTTTTCCCCCAAAAAATTATAGAGCTCTGTAATTTTTGTTTTGATATTTTCTCACAAAATTCGAAAACGTAGTTTTGGAATTTTCAGATCACGATTGTTTGATTCAGTGATTAACAATGTCTTGTTCATCGTCGACGGCGTCTGAGGATGAAGATGAAGGATTCGATTCTTACCGGAAGGGAGGCTACCATGCCGTGAGAGTCGGCGATTCATTTTCCGGTGGCCGATATATGGCGCAACGAAAACTCGGCTGGGGAGAGTTTTCCACCGTTTGGCTCGCTTATGATACTCAATTATCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCTTTGTTGCCTTGAAGATCCAGAAAAGTGCACCACAATTTGCTCAAGCAGCTTTTCATGAAATTGAAATCCTTTCTGCGATTGCCAATGGTGATCAATCTAACAGTAAATACGTTGTACGGCTTATTGACCATTTTAAGCACACAGGTCCTAATGGACAGCACATATGCATGGCTTTTGAATTTCTTGGTGATAGCTTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E282482" ref_strand="+" ref_description="SGN-E282482 [cLER-18-C8]">
      <seq>aaacgcaccgtctccttctctatcaaacttttcttttcccccaaaaaattatagagctctgtaatttttgttttgatattttctcacaaaattcgaaaacgtagttttggaattttcagatcacgattgtttgattcagtgattaacaatgtcttgttcatcgtcgtcggcgtctgaggatgaagatgaaggattcgattcttaccggaagggaggctaccatgccgtgagagtcggcgattcattttccggtggccgatatatggcgcaacgaaaactcggctggggagagttttccaccgtttggctcgcttatgatactcaattatccggttttgttgccttgaagatccagaaaagtgcaccacaatttgctcaagcagcttttcatgaaattgaaatcctttctgcgattgccaatggtgatcaatctaacagtaaatacgttgtacggcttattgaccattttaagcacacaggtcctaatggacagcacatatgcatggtttttgaatttcttggtgatagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="-" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="41522" stop="39654"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="41222" g_stop="40892" g_length="331"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="331" r_length="331" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="40891" i_stop="40152" i_length="740">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="40151" g_stop="39954" g_length="198"/>
          <reference_exon_boundary r_type="cDNA" r_start="332" r_stop="529" r_length="198" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="-" ref_id="SGN-E282482" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>529</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E282482" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="41222" e_stop="40892"/>
          <exon e_start="40151" e_stop="39954"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAACGCACCGTCTCCTTCTCTATCAAACTTTTCTTTTCCCCCAAAAAATTATAGAGCTCTGTAATTTTTGTTTTGATATTTTCTCACAAAATTCGAAAACGTAGTTTTGGAATTTTCAGATCACGATTGTTTGATTCAGTGATTAACAATGTCTTGTTCATCGTCGTCGGCGTCTGAGGATGAAGATGAAGGATTCGATTCTTACCGGAAGGGAGGCTACCATGCCGTGAGAGTCGGCGATTCATTTTCCGGTGGCCGATATATGGCGCAACGAAAACTCGGCTGGGGAGAGTTTTCCACCGTTTGGCTCGCTTATGATACTCAATTATCCGTGAGTTTTGTTTTCGTTACTATTTCTCTTCGATTTTTCGTCTACCGAATTGTTATTTTATCATTATTACACTTTTTTTTTATAGATAATTATTACGATCAATTTTCGTCTACCGAAGTGCTATTTTATCATAAATAATTGCTGCGAAGAACTGTATTATTTGTACTCATTACTATTATTACAAAAAAATAGATGTTTGTCACTGTTCAAGCAATGCATTATCTTAGTTTAAATAAGCCAGCAGCAAATGATATTTTACTGCTTTCAAAACAAGTGCTTGTTGCATCTGTGTCATTCTGGTTCATTGAAAAATCATATTTGATGAAAGAATAATTGTAGTATTCTAATTAGCATTATTGCCTATGTTCTTGACAGACATGACAATGAATATGCATGGCCTCTTTCCAAGTATGTGAGAGCCGTTACACATCAACAAGTGTTAGGTCCTTGATGATAATAAGCATGATACCATGTACAGTTTAAAAACTAATGTTTTAGGTACCTGTCAATTGTATGAGATGAATCCATTCTCCATTAATGAATCATGGTCTTTTATAATGGTGCATTGCTTGTAATGCTTTTCCTAACAATAAGGGGATGAGAATTATGTTCTCCCTTATATTGGTGCATTGCTTGTAATCTTTTCCTCACAATAAGGGTATGAGTTTGGAAGTTCATAAGGATCTTTAAGAACTTCGAAATTTGGAGCTTATGTCATTACTATGTTTGTTTTCTCCTAGGGTTTTGTTGCCTTGAAGATCCAGAAAAGTGCACCACAATTTGCTCAAGCAGCTTTTCATGAAATTGAAATCCTTTCTGCGATTGCCAATGGTGATCAATCTAACAGTAAATACGTTGTACGGCTTATTGACCATTTTAAGCACACAGGTCCTAATGGACAGCACATATGCATGGTTTTTGAATTTCTTGGTGATAGC</genome_strand>
        <mrna_strand>AAACGCACCGTCTCCTTCTCTATCAAACTTTTCTTTTCCCCCAAAAAATTATAGAGCTCTGTAATTTTTGTTTTGATATTTTCTCACAAAATTCGAAAACGTAGTTTTGGAATTTTCAGATCACGATTGTTTGATTCAGTGATTAACAATGTCTTGTTCATCGTCGTCGGCGTCTGAGGATGAAGATGAAGGATTCGATTCTTACCGGAAGGGAGGCTACCATGCCGTGAGAGTCGGCGATTCATTTTCCGGTGGCCGATATATGGCGCAACGAAAACTCGGCTGGGGAGAGTTTTCCACCGTTTGGCTCGCTTATGATACTCAATTATCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTTTGTTGCCTTGAAGATCCAGAAAAGTGCACCACAATTTGCTCAAGCAGCTTTTCATGAAATTGAAATCCTTTCTGCGATTGCCAATGGTGATCAATCTAACAGTAAATACGTTGTACGGCTTATTGACCATTTTAAGCACACAGGTCCTAATGGACAGCACATATGCATGGTTTTTGAATTTCTTGGTGATAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E200845" ref_strand="+" ref_description="SGN-E200845 [cLEC-5-G3]">
      <seq>aaaatgtatgtatattgcataattataagtgtatggcaagaatatatatgtttttgtctcgctttatacaaaaacaaaaacacaatatatacacttctgttgtataaagttagagaaaattgtatttcactgcaattatataattcacaattgtataattcgttggcctttttctctgcaatatttgaagtaaaatgtttgtaatttgtataattaagtgtataacacgaagatatatatttttacatgtgtatatacaattttctctcgctttatacaaaatagaaacagaatttatacacttctgtgtatatagcgagataggcgagcgagaatggagagtggcgagcgagatttttgggagggagacgcctgacaaactttagctaacgtttgctatggagcacaattaaatcaaactctagctactccatttagttagattactag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="-" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="49700" stop="48652"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="49400" g_stop="48959" g_length="442"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="442" r_length="442" r_score="0.914"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="-" ref_id="SGN-E200845" ref_strand="+">
        <total_alignment_score>0.914</total_alignment_score>
        <cumulative_length_of_scored_exons>442</cumulative_length_of_scored_exons>
        <coverage percentage="0.982" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E200845" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="49400" e_stop="48959"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAATGTATGTATATCGCATAATTATAAATGTATAGCAGGAAGATATATGTTTTTCTCTCGCTTTATACAAAACACAGAAACACAATATATACACTTCTGTTATATAAAACTAGAGAAAATTATATTTCACTGCAATTGTATAATTCGCAATTGTATAATTCGTTGGCTTTTTTCTCTGCAATATTTGAAGTAAAATGTTTGTAAATTGTATAATTAAGTGTATAACACGAAGATATATATTTTTGCATGTGTATATACAATTTTCTCTCGCTTTATACAAAACAAAAACAGAA-TTATACACTTCTGTGTATAAATCAAGAGAGGCGAGCGAGAATGGAGAGTGGCGAGCGAGATTTCTGGGAGAGAGAC-TTTGGCAATTTTTAGCTAACATTTGCTATGGAGCACAATTAAATCAAACTCTAGCTATTCCATTTATTTTAG</genome_strand>
        <mrna_strand>AAAATGTATGTATATTGCATAATTATAAGTGTATGGCAAGAATATATATGTTTTTGTCTCGCTTTATACAAAA-ACAAAAACACAATATATACACTTCTGTTGTATAAAGTTAGAGAAAATTGTATTTCACTGCAATTATATAATTCACAATTGTATAATTCGTTGGCCTTTTTCTCTGCAATATTTGAAGTAAAATGTTTGTAATTTGTATAATTAAGTGTATAACACGAAGATATATATTTTTACATGTGTATATACAATTTTCTCTCGCTTTATACAAAATAGAAACAGAATTTATACACTTCTGTGTATATAGCGAGATAGGCGAGCGAGAATGGAGAGTGGCGAGCGAGATTTTTGGGAGGGAGACGCCTGACAAACTTTAGCTAACGTTTGCTATGGAGCACAATTAAATCAAACTCTAGCTACTCCATTTA-GTTAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E393076" ref_strand="+" ref_description="SGN-E393076 [TUS-37-J4]">
      <seq>taaaatgtatgtatattgcataattataagtgtatggcaagaatatatatgtttttgtctcgctttatacaaaaacaaaaacacaatatatacacttctgttgtataaagttagagaaaattgtatttcactgcaattatataattcacaattgtataattcgttggcctttttctctgcaatatttgaagtaaaatgtttgtaatttgtataattaagtgtataacacgaagatatatatttttacatgtgtatatacaattttctctcgctttatacaaaataaaaacagaatttatttttttttgtgtatatagcgagatag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="-" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="49701" stop="48803"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="49401" g_stop="49077" g_length="325"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="325" r_length="325" r_score="0.911"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="-" ref_id="SGN-E393076" ref_strand="+">
        <total_alignment_score>0.911</total_alignment_score>
        <cumulative_length_of_scored_exons>325</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E393076" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="49401" e_stop="49077"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAAATGTATGTATATCGCATAATTATAAATGTATAGCAGGAAGATATATGTTTTTCTCTCGCTTTATACAAAACACAGAAACACAATATATACACTTCTGTTATATAAAACTAGAGAAAATTATATTTCACTGCAATTGTATAATTCGCAATTGTATAATTCGTTGGCTTTTTTCTCTGCAATATTTGAAGTAAAATGTTTGTAAATTGTATAATTAAGTGTATAACACGAAGATATATATTTTTGCATGTGTATATACAATTTTCTCTCGCTTTATACAAAACAAAAACAGAA-TTATACACTTCTGTGTATAAATCAAGAGAG</genome_strand>
        <mrna_strand>TAAAATGTATGTATATTGCATAATTATAAGTGTATGGCAAGAATATATATGTTTTTGTCTCGCTTTATACAAAA-ACAAAAACACAATATATACACTTCTGTTGTATAAAGTTAGAGAAAATTGTATTTCACTGCAATTATATAATTCACAATTGTATAATTCGTTGGCCTTTTTCTCTGCAATATTTGAAGTAAAATGTTTGTAATTTGTATAATTAAGTGTATAACACGAAGATATATATTTTTACATGTGTATATACAATTTTCTCTCGCTTTATACAAAATAAAAACAGAATTTATTTTTTTTTGTGTATATAGCGAGATAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E393075" ref_strand="+" ref_description="SGN-E393075 [TUS-37-J2]">
      <seq>taaaatgtatgtatattgcataattataagtgtatggcaagaatatatatgtttttgtctcgctttatacaaaaacaaaaacacaatatatacacttctgttgtataaagttagagaaaattgtatttcactgcaattatataattcacaattgtataattcgttggcctttttctctgcaatatttgaagtaaaatgtttgtaatttgtataattaagtgtataacacgaagatatatatttttacatgtgtatatacaattttctctcgctttatacaaaatagaaacagaggttttttttttttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="-" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="49701" stop="48803"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="49401" g_stop="49108" g_length="294"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="293" r_length="293" r_score="0.935"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="-" ref_id="SGN-E393075" ref_strand="+">
        <total_alignment_score>0.935</total_alignment_score>
        <cumulative_length_of_scored_exons>294</cumulative_length_of_scored_exons>
        <coverage percentage="0.955" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E393075" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="49401" e_stop="49108"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAAATGTATGTATATCGCATAATTATAAATGTATAGCAGGAAGATATATGTTTTTCTCTCGCTTTATACAAAACACAGAAACACAATATATACACTTCTGTTATATAAAACTAGAGAAAATTATATTTCACTGCAATTGTATAATTCGCAATTGTATAATTCGTTGGCTTTTTTCTCTGCAATATTTGAAGTAAAATGTTTGTAAATTGTATAATTAAGTGTATAACACGAAGATATATATTTTTGCATGTGTATATACAATTTTCTCTCGCTTTATACAAAACAAAAACAGA</genome_strand>
        <mrna_strand>TAAAATGTATGTATATTGCATAATTATAAGTGTATGGCAAGAATATATATGTTTTTGTCTCGCTTTATACAAAA-ACAAAAACACAATATATACACTTCTGTTGTATAAAGTTAGAGAAAATTGTATTTCACTGCAATTATATAATTCACAATTGTATAATTCGTTGGCCTTTTTCTCTGCAATATTTGAAGTAAAATGTTTGTAATTTGTATAATTAAGTGTATAACACGAAGATATATATTTTTACATGTGTATATACAATTTTCTCTCGCTTTATACAAAATAGAAACAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E739670" ref_strand="+" ref_description="SGN-E739670 [LC18BF03]">
      <seq>ccttgtctatgtgcattgtgctgtccgaagcacaaaccccatcctacttctgacatcacttttctcgatcccccgcctatcgataccaccactgtccactgtccggcggcggcggcggcggcggatcaccacctgggatcttcttaaacctctctaattctctgccctattccttatcacagatctaattcagtattctcaaactgattgaatcgactcactaatggctgcgcagaaccaaacggatcaatttgaggcttattttcgcagagcagatttggatcaggatggtcggatcagtggtgttgaggctgtttccttctttcaaggctctaatttgcctaaaccagtccttgctcaaatatggacatatgttgatcaaagtcggaccggtttccttagccgtcaggaatttttcaactatcttaatcttgttacagtggcgcaaaaacgagagttgaccccagaaatagtgaaagctgcactatttacgccagcttcagctaaaattcctgccccacagataaaccttgcagctgtagcaggtcctcgtccaacaaatagagttggttctgcagtgcctccagttagtcgtgctgctccaacagaagcaccgagttttggcattaggggtcaacagggtttacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="+" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="49584" stop="51961"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="49881" g_stop="50241" g_length="361"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="361" r_length="361" r_score="0.978"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="50242" i_stop="51374" i_length="1133">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="51375" g_stop="51661" g_length="287"/>
          <reference_exon_boundary r_type="cDNA" r_start="362" r_stop="648" r_length="287" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="+" ref_id="SGN-E739670" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>648</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E739670" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="49881" e_stop="50241"/>
          <exon e_start="51375" e_stop="51661"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAATGCCTATGTGCATTGTGCTGTCCGAAGCACAAACCCCATCAAACTTCTGACATCACTTTTCTCGATCCCCCGCCTATCGATACCACCACTGTCCACTGTCCGGCGGCGGCGGCGGCGGCGGATCACCACCTGGGATCTTCTTAAACCTCTCTAATTCTCTGCCCTATTCCTTATCACAGATCTAATTCAGTATTCTCAAACTGATTGAATCGACTCAGTAATGGCTGCGCAGAACCAAACGGATCAATTTGAGGCTTATTTTCGCAGAGCAGATTTGGATCAGGATGGTCGGATCAGTGGTGTTGAGGCTGTTTCCTTCTTTCAAGGCTCTAATTTGCCTAAACCAGTCCTTGCTCAGGTTCGTTCGTCCACTTCTGTCTTCTCTTATTGTCTTCCTTCTTCATCTATTAGAGTGAAGGAGAAGTAAGGAAATTGAAGCTAGTTATTGACAGTTTACCAAGTTATCATGTAGTATGCGTCTTTTTTCGGTGATTTGAATTGTTGCAAGTCCAGTTGCTACTATTACTTGTCAATCCGTATATGTTTTGAACCCCAACAATTTACCGCCAATGAAATCCAACAAACCGAGTAAGGAGAGTAGAGTATAGGTAGTAGACCTTACCCCCACCCAGTGAGCCTCACTTCTCATTGCAATGCCATGCCTTTCTACCTCTTCTTCCATGACTTGATTTATTGCTATTGATGGCTTATACCTGTTCTACTATTCTTGCTACAATTGAGTGGGCTCAATTCATTTTATTGTCAAATACTTTGAAGTGTTCCGGTTATTTGAGCTTTCAAATTGTTGCTAGACAGCAGGAATTGGGTGTTTTGGGATGAAAGACATGGTTTAATTTAGTAAAAAGAAGCAGAGAAATTCACAATTGTTGCGTTTGATGAATATTTGGAACTCAATGAAAACAATATGAAAACAGGTAGCAGATATGAGATACATGAAAAGTTTAGTCAGAGTATTAGTGAAATGGCTACATATTTTAATTTTTGAAATCTTAACGTTTATGTCCAGTAATATAACAAAATGAATAGCAATCTGGTAACTTAGAATAGAAGATAGTAAATAGTAGAGTTTGAAATTTGAAACTAGGACGACTACTAACATGTGTTAGAGCCACTTGAGAATGTAACAAAATTTGCAGATAGCTCCGTGGTTTAGGCTGCTTGAGTGGTAAGACTCAGATATTATTGTTGTTGATACTTGATAAAGTAGTGCAACAACAATTATGATGCTTGCCAGAAGACAGGTCTAGAAACAGATTGCAAGATAATCTAGATGTGGAAGAAGTTATAGATCGTAATTGTCCATCTGCAACTCCTGCTCCTGGATCTATCAATTTCCTCTTGTCTTCTTACTACAGTTCACGTGTTCTTTTGCCTTTATGCAGATATCTGCAGCTCCTGTCTAACGTCTGGATCTTTCATTTTTCCCATGTCTTCTTACTACAGTTAACGTGCTCTTTTGCCTTTATGCAGATATGGACATATGTTGATCAAAGTCGGACCGGTTTCCTTAGCCGTCAGGAATTTTTCAACTATCTTAAGCTTGTTACAGTGGCGCAGAAACGAGAGTTGACCCCAGAAATAGTGAAAGCTGCACTATTTACGCCAGCTTCAGCTAAAATTCCTGCCCCACAGATAAACCTTGCAGCTGTAGCAGGTCCTCGTCCAGCAAATAGAGTTGGTTCTGCAGTGCCTCCAGTTAGTCGTGCTGCTCCAACAGAAGCACCGAGTTTTGGCATTAGGGGTCAACAGGGTTTACC</genome_strand>
        <mrna_strand>CCTTGTCTATGTGCATTGTGCTGTCCGAAGCACAAACCCCATCCTACTTCTGACATCACTTTTCTCGATCCCCCGCCTATCGATACCACCACTGTCCACTGTCCGGCGGCGGCGGCGGCGGCGGATCACCACCTGGGATCTTCTTAAACCTCTCTAATTCTCTGCCCTATTCCTTATCACAGATCTAATTCAGTATTCTCAAACTGATTGAATCGACTCACTAATGGCTGCGCAGAACCAAACGGATCAATTTGAGGCTTATTTTCGCAGAGCAGATTTGGATCAGGATGGTCGGATCAGTGGTGTTGAGGCTGTTTCCTTCTTTCAAGGCTCTAATTTGCCTAAACCAGTCCTTGCTCAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATGGACATATGTTGATCAAAGTCGGACCGGTTTCCTTAGCCGTCAGGAATTTTTCAACTATCTTAATCTTGTTACAGTGGCGCAAAAACGAGAGTTGACCCCAGAAATAGTGAAAGCTGCACTATTTACGCCAGCTTCAGCTAAAATTCCTGCCCCACAGATAAACCTTGCAGCTGTAGCAGGTCCTCGTCCAACAAATAGAGTTGGTTCTGCAGTGCCTCCAGTTAGTCGTGCTGCTCCAACAGAAGCACCGAGTTTTGGCATTAGGGGTCAACAGGGTTTACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E300265" ref_strand="+" ref_description="SGN-E300265 [cLEW-17-A17]">
      <seq>cgaagcacaaaccccatcaaacttctgacatcacttttctcgatcccccgcctatcgataccaccactgtccactgtccggcggcggcggcggcggcggatcaccacctgggatcttcttaaacctctctaattctctgccctattccttatcacagatctaattcagtattctcaaactgattgaatcgactcagtaatggctgcgcagaaccaaacggatcaatttgaggcttattttcgcagcgcaaaggaaggagactagttttgatggttcacccaatgctgcccaaagtgaacactggggtactgaatctgtgttctcgagggataaaggttttgatggatctggctggggtacatttgataccaactttgacactgatgctgcatgggacgtcaattctgttgcaaaggattcagatcatgacaatctcaaggaatcttctctttttggagatgatgattggggcttagcccctattaaaacggggtccaaacagtccaacacactaccgaatcaaatgccatcctttgattctgttcctagcacgccaagttacaatgctgggatagacaacacgttccccaaacaaagccctttctttgattct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="+" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="49606" stop="61180"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="49906" g_stop="50149" g_length="244"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="244" r_length="244" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="50150" i_stop="54142" i_length="3993">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.849" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="54143" g_stop="54152" g_length="10"/>
          <reference_exon_boundary r_type="cDNA" r_start="245" r_stop="252" r_length="8" r_score="0.700"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="54153" i_stop="60147" i_length="5995">
            <donor d_prob="0.779" d_score="0.00"/>
            <acceptor a_prob="0.969" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="60148" g_stop="60189" g_length="42"/>
          <reference_exon_boundary r_type="cDNA" r_start="253" r_stop="294" r_length="42" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="60190" i_stop="60361" i_length="172">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.973" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="60362" g_stop="60482" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="295" r_stop="415" r_length="121" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="60483" i_stop="60682" i_length="200">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="60683" g_stop="60880" g_length="198"/>
          <reference_exon_boundary r_type="cDNA" r_start="416" r_stop="613" r_length="198" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="+" ref_id="SGN-E300265" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>615</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E300265" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="49906" e_stop="50149"/>
          <exon e_start="54143" e_stop="54152"/>
          <exon e_start="60148" e_stop="60189"/>
          <exon e_start="60362" e_stop="60482"/>
          <exon e_start="60683" e_stop="60880"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGAAGCACAAACCCCATCAAACTTCTGACATCACTTTTCTCGATCCCCCGCCTATCGATACCACCACTGTCCACTGTCCGGCGGCGGCGGCGGCGGCGGATCACCACCTGGGATCTTCTTAAACCTCTCTAATTCTCTGCCCTATTCCTTATCACAGATCTAATTCAGTATTCTCAAACTGATTGAATCGACTCAGTAATGGCTGCGCAGAACCAAACGGATCAATTTGAGGCTTATTTTCGCAGAGCAGATTTGGATCAGGATGGTCGGATCAGTGGTGTTGAGGCTGTTTCCTTCTTTCAAGGCTCTAATTTGCCTAAACCAGTCCTTGCTCAGGTTCGTTCGTCCACTTCTGTCTTCTCTTATTGTCTTCCTTCTTCATCTATTAGAGTGAAGGAGAAGTAAGGAAATTGAAGCTAGTTATTGACAGTTTACCAAGTTATCATGTAGTATGCGTCTTTTTTCGGTGATTTGAATTGTTGCAAGTCCAGTTGCTACTATTACTTGTCAATCCGTATATGTTTTGAACCCCAACAATTTACCGCCAATGAAATCCAACAAACCGAGTAAGGAGAGTAGAGTATAGGTAGTAGACCTTACCCCCACCCAGTGAGCCTCACTTCTCATTGCAATGCCATGCCTTTCTACCTCTTCTTCCATGACTTGATTTATTGCTATTGATGGCTTATACCTGTTCTACTATTCTTGCTACAATTGAGTGGGCTCAATTCATTTTATTGTCAAATACTTTGAAGTGTTCCGGTTATTTGAGCTTTCAAATTGTTGCTAGACAGCAGGAATTGGGTGTTTTGGGATGAAAGACATGGTTTAATTTAGTAAAAAGAAGCAGAGAAATTCACAATTGTTGCGTTTGATGAATATTTGGAACTCAATGAAAACAATATGAAAACAGGTAGCAGATATGAGATACATGAAAAGTTTAGTCAGAGTATTAGTGAAATGGCTACATATTTTAATTTTTGAAATCTTAACGTTTATGTCCAGTAATATAACAAAATGAATAGCAATCTGGTAACTTAGAATAGAAGATAGTAAATAGTAGAGTTTGAAATTTGAAACTAGGACGACTACTAACATGTGTTAGAGCCACTTGAGAATGTAACAAAATTTGCAGATAGCTCCGTGGTTTAGGCTGCTTGAGTGGTAAGACTCAGATATTATTGTTGTTGATACTTGATAAAGTAGTGCAACAACAATTATGATGCTTGCCAGAAGACAGGTCTAGAAACAGATTGCAAGATAATCTAGATGTGGAAGAAGTTATAGATCGTAATTGTCCATCTGCAACTCCTGCTCCTGGATCTATCAATTTCCTCTTGTCTTCTTACTACAGTTCACGTGTTCTTTTGCCTTTATGCAGATATCTGCAGCTCCTGTCTAACGTCTGGATCTTTCATTTTTCCCATGTCTTCTTACTACAGTTAACGTGCTCTTTTGCCTTTATGCAGATATGGACATATGTTGATCAAAGTCGGACCGGTTTCCTTAGCCGTCAGGAATTTTTCAACTATCTTAAGCTTGTTACAGTGGCGCAGAAACGAGAGTTGACCCCAGAAATAGTGAAAGCTGCACTATTTACGCCAGCTTCAGCTAAAATTCCTGCCCCACAGATAAACCTTGCAGCTGTAGCAGGTCCTCGTCCAGCAAATAGAGTTGGTTCTGCAGTGCCTCCAGTTAGTCGTGCTGCTCCAACAGAAGCACCGAGTTTTGGCATTAGGGGTCAACAGGGTTTACCAGTTCCGCAGAGCCAGTATATGCGGCCTCCTCGACCCTCCGTTCAAAGCACCAGTTTCCCATCTCAATCAGGTGCTTCTAGTCATGGAATGCCTGGTGGTACCATGGCAGCTTTTAGTCAAGCCAATTCTTCTGATTGGCTTTCTGGTAATGGTGGCTCCCAAGCAGCTGTTACTTCCCAAGCTCCTAATATCAGTATAAATTCTAGAAGTCAGGATGGATTTGATCATGCTTCTCCACAACAGAACCAACAAAAGACCACTTATTCGGCAACACCAGGTTCATCAAATTTAAATGATGCCGCTCTGCTTGGTAACCAGCCAGATGTTAAGGATCCTAAAGCCGTTCCAGTTTCAGGAAATGGATTTGCATCTGACTCGCTTTTTGGAGATGCTTTTTCAGTTGCATCAGTTCAACCAAAACAAAACTCCGCACCTAGTATATCTTCTGCTGGCAGCTTTCCAGTCTCACCAGCCATTGTCTCTGCATCTGCAGGGCTCCAACATCCAGTAAAGGCCAGCCCAATTGTTTCACAAGTTGCACTTCCGCAGAAACCAGTAAATCAGCATCAGCAAGCTCAGTTGACTGGGAGACCAAACAAACAGGTCTTAGTGCCAAGTGCTGGTGCAAATCCTAATGCAGCTGGAAATTCTCGTTCCAGTCAGTCTCAGATTCCTTGGCCAAGAATGACCCGGTCTGATTATCAGAAGTACAGCAAAGTATTTATGGCTGTGGACTCAGACAGGGATGGAAAAATTTCTGGCCTGGAGGCAAGGAACCTCTTTCTAAGTTGGAAGCTGCCTCGAGGTTTGATTTCCTTACTGCCATGATGATTTGTGAAATACCATGTTCATTCTGGTTTAATTCCGAGACAGATATTTATTTGGTAATTACAAATATCTATTAGTGGTTTTGTTTCGATCAACTGATTGTGTTATGTATCCTTTAGTTACTACCAAGTGATTTGGGACATCAATATTTGCTGCTGTTCTTGCAGTTGGAAGGCTTTAATTTGGATGATTGGGACTCTGGGACATTGATTGATCCCTGTGGTAGCTTGTAATTTTAGAAAGTTGGTCACGAGTTTGTTTGATTATTCTTTGTGGGAAGGGCGAGCTTAATGCCCCTTAATCTTCTTAAACTTGCTATTTGACTTTCAACTTCGGTAGCTGTGTTGTTCCGCAATTGTATTTTTAGAGAAATGATGTTTTATCAAATCTGCAGCGTTGGGGAAGTGCTGAAACAGTACAAGTGAACAAAAAACAAAAGAAAATCATGTTCTAATCGTACAGGGACCCTAAGAGGCTAAGTATTGATTCTGCTTCATATTTGAATTCATCTTTACACCCAAAAAAAAAAAAGTGTACACTCAGAATTGATTTGCTAGATTGAGTAATTGTACTTCATTTATTAACTAGAAGTACAAGTTGTCTCGATAAGAATTCCTTGATAAACTTATTTTTTAATTAGGTTTCATTAGTGATAGAGATTTAAGAGCCAAGTGGATATGTTAGAAATCCAATTATTCCTATAAAAGATAAATCATCTATCCTTAATTTTTTTCGTTTCAGAAAGCCGGTTTACTTCTTACAAACTATAATTCTTTGTTTGGAAGAGCTTAAACCAGATAAGTTATTTAGTTAATCATGATCTCCCTGTGAAATCGGCTATTTGAAATACTTATTTAGTTAATCATGATATCTCCCTGTGAAATTGGCTATTTGAAATACTTATGTTAGATGCACCATACTATTAAATAGTGGAACTTGATTAGGTAGCTCACTTCTTGCCTCCACAAACTTTTTCTTGCTTGGTAAGGGCTTTGCATCATAAGATTCTTAGGCTTACAGTGGTTATGGTTTTCATTCAAACATCTAGTAGCTTTTCTTGAAATTTGGAATGTGTGGCGACTCTTTACTTCTCAATAGTTCTGTATAGCGCATCGTTTTATGTTCCGTCGGGGTTATGCACTTCGTACTTTTAGCAGGCTACAATTTCCTTACAGGTCTTTTAAGATATTTTTGTGCTGTCTATTATGACCCTTGGCACAACATTCTTCTTGCTCATGAGAACTCATGCTGAATTTTCTTTATATCTCTTAGCTTTTGGTCCTCCAGAACAATAATATGGTATGCTTTTTGTTTGTCAGAGGTGCTGAAACAGGTGTGGGATTTATCTGATCAAGACAACGACAGCATGCTGTCTTTAAGGGAATTCTGCATTGCGCTTTACCTGATGGAGCGGCACAGGGAAGGTCACCCTCTTCCTTCAGTCCTTCCGACCAATCTTATTTTCGACGAGTCGTTATTACCTGCTTCTGGTCAGCCTGTCCCACCACATGGTGCTGTTGCTTGGAGACACACACCAGGTAAATTTATTTCCTGTTTTTATAACAGTCATTATGCATGGCTCATGATTAGTGAATGCACATATGTGTATTAGCAAATAAAGCAGCTGATTCTGTTTTGATTAGTATATACAGGCATCTAAAGGCGTTTCTAAAGGTCTTGATTCTCTCCATCTATAGACTGAGGTTTTCAACTAGATACTTAAGGATGTTTGGATCGACTTTTTAAAGAAGCTTATAAGTTAAAATGCTAAAAGTCATAAATTGGTCATACCCAACTTATGCCTTTTAGCTTATTTTTGTACTTTTTTGACCTAAAAGTAGGTGTTACAAGCACTTTTTGTCATATCCAAACACTTCGAAAAATTAAATAGAGCTTAAAAGCCAAAAAGCTACTTAAAATAAGTCAATGCAAACAGCCTCTTAGACGCTTTCCCGTTACATGATATCAGAGCCTAAACTTCGGTAAGCCTGTTTCATACTTATAAGTCAGCATTCAAGTCATAGTGGGAAGCCCAAAAATCAAGTTACAAATGCGAAGGGTGTTGAGGTGTATAATATTTCCATTCCTATTTATGTCACACACTTCCTTTTTGTCCTTTCCCAAAAAGAATGATATTGGAAACAATTAACTTTATACTTCCCATTTTACCCTGAATGAGAAGCTTGTGTAACAGCACAAATGTTACAGCATGGTCAAGGCAACAAGATTCATATATTTTAGAGCTGCACAAATGCTATGACGTATTTTGGGTCACAAGTGGTCCAGTTTCCATTTTATTCTTTTAACTCTCTGTTGAGTCAAGCTAGGTCACATAAATTGGAACAAAGGAGATGTAAGGGCACTTGAAGTGGTCTTTAAATGTCTTGTTCCAATCAACCTTAACTTAAGGTTGTTGAGTTCGATGCTAAGATTCTTTCACTCTTTGCATTATAAGCATTTCATATGATGATAACTTTGTATATATAATGTGCCCAATTCACAATTTACTTAAACTTGAATCACAAAATATGAGTAGCCATATTTTGATCTGTAATAATATTATTTGAATGTCGAGAAATTATCTCTGAGCCTAAAATTTCCTCCAGAGCACGCCTTAATATATCTGTGTGTAGACCAAGTTTTATTGGATGAGAGGAGAGACTAAAAGTTGTCTTCTCTTTTTCTTCTACATATTTGGGAGTTAATTGTATGGCCAGTTACAAGCTGTTGTCATCTTTGTAGCTTTTAGAAATATATTAGCTATCACACCCAAGGGTGTGGCACAGTGTTCAATGAAGTGATAGAGAACCATGAGGTCCGGGGTCCAAATCTCGGTGGACGCAAAAACAGGGGTGGAGCTAGGGGTGTCAAATGGGTGTGTTGGGCTGAAATTGAAAATATTAAAATGGGTTGAGATAGAAGTCGGGTTGGGTCTTGAACTGCGTTGGGCTCAAATGGGCTTAAAAATGGTTGGGTTTTGACCTGCGCAATTTGACCCGATCAATCTTACTAATTTAACATATTGATATTTAACTTTTATAATTACAATTTGAATTTTAGCTCGAAATTATTTTTTTAAAAAGGTAACAAATGGATAGATAAACCCTAAAAGATGCTAAATAGATAATAATTTATACCTTAAATATAGAAACATATCTTAATAAAAAGTTTTAAAACGGGTTGAAATTGGAGATTGAATTGGGCTCAATTGAGGATTCTCTTCAAATGGGTTATGCTTGAATAGGTTGAGATTGAACCCAATTCAAATTATCTTGAGCCCAACCCTTAAAATTCTGGGCGGATTATCTATGTTTGGGTTCACTTTTGACACCCCTAGGTGGAGACAACTTTTGCCAAAGGGATCCAAAAAGGTAAAAAGAATTTTACCAATTATGTGAAGTTACCTTTTCTCAAAAAAAGGTAAAAAGAATGTCTCTTGTGAGACTCGAACCGACAACTGTGGGCTACACATTATGTCCTTCGGCCGCTGAGCTGCAGTGCATATTGTGTAAAGGGAATTCAACAACAAACCCAATGTAATTCCCCAAGTGGGGTTCGGGATGGTAGTGTGTACGCAAATCTTACTATTGCCTTCACAAGGCAGGGAGGCTTTTTCGAAGACCTTCGGCTTAAGTAGGAACGACTCATCAAAATATGTTTATACATGTCCGTCTCATACAATCAGATCAATCAATCAATCATCCCCGAGCAGCCTGTTAAGGGGATTCAAAACTTAATATTTATATATGATTTAGTAAATTGGCCTTATATATAAAGTGTAAGTTTCCGACAAAGGGGTTCAGTTGAACCCCCTTGTACCCCCCTAGTTCCACGCCTACGCAAAAGCACCAGGTGATTTCTTTTCATCTATCCATGCCTTAGTAGAAAGAGTTACCCGGTACCTGTGTTGATGGGAGGCTGTATTGGAGCTATATTTAAAGTTTCGAAAATAACATTTGTTTGAGCATTCAGGTATGAAATACAAGCATAAGGCTTCATACAATAGAAGTAAAAGCACTTTATATTTACTCGAAGAGAGTGCACCAAATAGAAGAAAGAGGAAATTAGTAGTATTTTGCAATCTATATATTTCATTTGAACCTCCTCCTATTTTCCAAGGTAGGTAGTTCCGGTTCCTAAATCAAACTCTCTTCCTCCTCATTTCAAGAAGGAAAGCTAACATCATCTAAAAATTTGTCCTCGTATTGCACGATATAATTCTAGTGTATATTGTATAGCAGAAAAAGCACTGTCAATCAGTCTAGGACTTCGGTAGTATGTTATTTGGTATCCATGTCAGTCTAGATAATTCTCCTCCTGTTTCTTGTCTTTTGATTTAGTTTCCTGATTCTTTTCATTTCCAGCCACCCAGCAAACACAGGGGCCAAGGGTTGTTCCAGGACAGATGGCTTCTGGCGCTCCAGGAAGGCCTCCACGTCCAGTTCCTATTCCCCAGCCCAATGAAGTTGTGCAGCCTGGTCAACAGAAGCCTAAAGTTCCTGCACTGGAGAAGCATCTTGTGGACCAACTTAGTCAAGAGGAACAGGATGCATTGAGTTCAAAGTTCCAGGAAGCAACTGATGCAGAAAAGAAGGTGAAATTTAACTGTTCTTGGCTACCATTTCCTTTCTTCCTTGCTCTTTTCTCAGTTCTTCCAATACTCCCTTTTTTCCCCATGGTTATCTAAATTTACATTTCACAAATTGGGTCTTTAACCAAACAAGTGAGAAAACAAATTGCAATTTGAGATAAATCTTGAACAGTATGTGTCTACTAGTGAAGTGTGTGAATGCGACTGCCATTTTAACACTTGCACCTAGATGCAGTTCTGTGCATTGCAGGAAACTTGGCAGTATTTGCTGGTGTGTTCTGTCTTCTTTTATTTCAACACTAGATTATATTGTATTTATTTGTTGAAACTGATGTACTAGAAGGCAAATGAACACTTTTCTTTCGGAACCAATTGACAAATAATTTGTCTGATGTGTCAAACAACAATGCTACATTTAATTTGCTTCAGAATGTGAATTATGTGCATGGCATGGATACTGTTGTGTTTGTCTTGTCATAATTTCCTTGGTTATCATGTCAGTTGTAGCACTAACTTTTGATTATTTGTCAGTGTTTAGAGAACTATAATCAATGAATATTTGGCATTTTTTAAATTTCCTTAATTGTTAATTTGATGCTATGGAGGACCTGAGACTGATCTTCAAGTGTGAATTTAACTTAATTCTAGTGGAGCCTCTTCTTATGTCTGTTGGTGCTTCTTTACTTCCAAGTGCTTGTAACTGCCAACATTAATTAATATAATTTCCTCCCTCTATGCTATAATATTGAAGGTCATGGAATTGGAGAAGGAAATTTTAGAAGCAAAAGAAAAAATTCAGTTCTACCATGCAAAGATGCAAGAAATAGTGAGTGTCTGATCTTTATGCACCTCAACTTCAATCAATTATATTCAGGGATCTAGATATTGCTTTCTTTTGTTAAGGTAAATAATTTCATTAACAATTGTATACCAAAAGAAGAGATCCTACAACGCTAAAATGGTCTGCGTTCTCCTGTTATTTCTTTATCCAGATTTTATACAAAAGTCGATGCGACAATAGACTAAATGAGATCACCCAAAGAACTTCTGCTGACAAAAGAGAGGTAAAAACTTTTCTCAACATAGGGAAACCACATCTCATATATGTTGTTTAACTTAAAATGGAGAATTTGACAGGTTGAGTTATTGGCTAAAAAATATGAAGAGAAATACAAGCAGACAGGAGACGTTGCTTCTAAATTGACCATTGAAGAGGCCACCTTTCGGGATATTCAGGTATTTGTGGATTTGTTTTGTCAAATGCATTGGTGTAAAGTTAACTTCCCTTTCTCATATTTTCTTTTAAATCATGTGAAATTGGCCTGTGTTTAAATGGTGTTATGTTGGTGAACCTTTTATAGGAGAAAAAAATGGAGCTATACAAGGAAATTGTTAAAATGGATCAAGATGGCAAGACTGATGGTATCCAGGTTGGAATATTGTCTCACTACTCAATTTGGAAGAGATAAGTTGAACTTTTTTGAAGCAATCATTTCTCTTTTATAGGACCGTGCTAGTCACATTCAGGTGAACCTTGAGGAGCTAGTAAAATCACTGAATGAACGGTGCAAAACTTATGGTTTACGAGCTAAACCAACTACACTGCTTGAGCTTCCATTTGGTAATTATACAAGTCTTTTATACTTAGTGTGAAGATATGAGCTTTCATTTGGTTGTCTCATCTATTGCTATATTTTTATTTTGAAATCAGTAAAATCTAATAAAGATCGTTTCAAAAATATAACTCCAATGCCTTGTTTTTGGGTGCTGAATTGTGACTTAAACTATTGTTCCTGAGAAGAATCTTGATGATAAAAAATGGTTCCCTGGAAGAAATTGTGATTCTAGCGGAGTCTGTTCTGTTTAAGAAGTGCCATTTGAGTTTCACCTATCTTGATTCTTGGCTAATAATATAATGAGCTGGACGGGCCTGCAAAAAGAATTTTCCATGAGGCACGTTAGCTGGACATTCGACCTCCTATAACAGAGATCCAAAATTCACTAGTCAATCTCAAGCCGAAGCCTTTCATTCTTCCAGCCAATTTGAGTGTATTCTTTATTGGGGCATTAGAATTAACTTGTTACCGACTGTTTATGGATTTGACTCTTTTGGCCAGTATTTCTCTAAAGAAACCTCAAATTCAAAATACGAGGTCTTCCCTCTTTATATTTACCTCATGACCATTTAGTACATGGTATGATGCTAATATTTTTCTTTGGAGATCCGTGTGTATTCTCCGTTGGTCTGCAATTTGTAGTGCCAAGTAGGAGGTGTGTGATGTATATAACTTTAGCCACTGGCACAAGCATTAAATTTATGATACCTAAGTTCAATGTGTTTTCTTGTCTGTGATTTTCGTTGATGTAAATTCTTTTCAAATGCTTTCTCATACTATTATTTGTATTTTCGAAGGTTGGCAACCAGGCATCCAAGAGGTTGCAGCAGACTGGGATGAAGAGTGGGATAAGTTTGAAGATGAAGGTATGTTTTAAGAAGTCAGCTTGTTAATCGAAGTGCTGACACTCAAAATGCCTCCAGAGGCCAGTGAATCAGTTTTATTTCTTCTTTGTGTTGCTTTTGGATGTGAGCGCAAATTTGGCTCACTTCGTTGTTGAACTCTTTTTCTTCCAGGATTCACATTTGTGAAAGAGCTGACACTCGATGTGAAAAACGTCATTGCCCCTCCTAAAACAAAGTCATCATTGGTTCGTGAGAAAGCATCTTCTTTAGCTGAACATGATTCTGGAAAATCATCTGCTGATGCTGATACTGATGCAAAGATAGATAAGCTGTCAAACCATGTACAAGCTAGAGAAGTTGGTGACATGGAATCTGCACATGGACATCAGCAAACAGCAAGAAGTCCAACTGATAGTCCATCAAGGAGTAATGCAGTTGAAAGCCCGTCAAAAGAAGTCCAAGAGTCTATGTACGGGAAGGATGTCAGTTTTGATGGTTCACCCCATGGTGCGCAAAGGTAATGTGGCGGTTCTCTCTTCTTTAGGTCATTTAGTCTATCATGCTCTCTTTTTCCTATTAAAGAATTCTGAGTATGTTCTGTACAGGAAGGAGACTAGTTTTGATGGTTCACCCAATGCTGCCCAAAGGTAATATGGTGGTTCTCTTCCTAGTTTTTGTGATTCAGTATACCACGTTCTTTTGTTTTGCGATGACCACAAGTTGCCTAGAATACTTAATTGTAGAGGGTTTTCACCTTCTACAAATTATTGTGTAGTTCCCTAGATATCTGAATCTCTTCGTTTGATTTTACGAGTGCAGTGAACACTGGGGTACTGAATCTGTGTTCTCGAGGGATAAAGGTTTTGATGGATCTGGCTGGGGTACATTTGATACCAACTTTGACACTGATGCTGCATGGGACGTCAATTCTGTTGCAAAGGTAAAAATAGATTATTTTGCATTTTCTTTTTCACTTTTGCAACTGCTTGGTTAGATGAAGACCTTATCATGTTGTAGAACATTATTGTCTAGGCAACCTTCTACTCGTTCGCAGAGTTTGTCTCGTTTCTTAGAATACCTTTGACATTATTTGAAAGCTGAAAGTCCACGTTATATTGCTTACTTTCTTTGTTTATGCAGGATTCAGATCATGACAATCTCAAGGAATCTTCTCTTTTTGGAGATGATGATTGGGGCTTAGCCCCTATTAAAACGGGGTCCAAACAGTCCAACACACTACCGAATCAAATGCCATCCTTTGATTCTGTTCCTAGCACGCCAAGTTACAATGCTGGGATAGACAACACGTTCCCCAAACAAAGCCCTTTCTTTGATTCT</genome_strand>
        <mrna_strand>CGAAGCACAAACCCCATCAAACTTCTGACATCACTTTTCTCGATCCCCCGCCTATCGATACCACCACTGTCCACTGTCCGGCGGCGGCGGCGGCGGCGGATCACCACCTGGGATCTTCTTAAACCTCTCTAATTCTCTGCCCTATTCCTTATCACAGATCTAATTCAGTATTCTCAAACTGATTGAATCGACTCAGTAATGGCTGCGCAGAACCAAACGGATCAATTTGAGGCTTATTTTCGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC-GC-AAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGGAGACTAGTTTTGATGGTTCACCCAATGCTGCCCAAAG............................................................................................................................................................................TGAACACTGGGGTACTGAATCTGTGTTCTCGAGGGATAAAGGTTTTGATGGATCTGGCTGGGGTACATTTGATACCAACTTTGACACTGATGCTGCATGGGACGTCAATTCTGTTGCAAAG........................................................................................................................................................................................................GATTCAGATCATGACAATCTCAAGGAATCTTCTCTTTTTGGAGATGATGATTGGGGCTTAGCCCCTATTAAAACGGGGTCCAAACAGTCCAACACACTACCGAATCAAATGCCATCCTTTGATTCTGTTCCTAGCACGCCAAGTTACAATGCTGGGATAGACAACACGTTCCCCAAACAAAGCCCTTTCTTTGATTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E738396" ref_strand="+" ref_description="SGN-E738396 [LC13BH11]">
      <seq>cagtcaaaccccatcaaacttctgacatcacttttctcgatcccccgcctatcgataccaccactgtccactgtccggcggcggcggcggcggcggatcaccacctgggatcttcttaaacctctctaattctctgccctattccttatcacagatctaattcagtattctcaaactgattgaatcgactcagtaatggctgcgcagaaccaaacggatcaatttgaggcttattttcgcagagcagatttggatcaggatggtcggatcagtggtgttgaggctgtttccttctttcaaggctctaatttgcctaaaccagtccttgctcagatatggacatatgttgatcaaagtcggaccggtttccttagccgtcaggaatttttcaactatcttaagcttgttacagtggcgcagaaacgagagttgaccccagaaatagtgaaagctgcactatttacgccagcttcagctaaaattcctgccccacagataaaccttgcagctgtagcaggtcctcgtccagcaaatagagttggttctgcagtgcctccagttagtcgtgctgctccaacagaagcaccgagttttggcattaggggtcaacagggtttaccagttccgcagagccagtatatgcggcctcctcgaccctccgttcaaagcaccagtttcccatctcaatcaggtgcttctagtcatggaatgcctggtggtaccatggcagcttttagtcaagccaattcttctgattggctttctggtaatggtggctcccaagcagctgttacttcccaagctcctaatatcagtataaattctagaagtcaggatgggatttgatcatgcttctccacaacagaaccaaccaaaagac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="+" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="49613" stop="52219"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="49908" g_stop="50241" g_length="334"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="333" r_length="333" r_score="0.991"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="50242" i_stop="51374" i_length="1133">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="51375" g_stop="51919" g_length="545"/>
          <reference_exon_boundary r_type="cDNA" r_start="334" r_stop="880" r_length="547" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="+" ref_id="SGN-E738396" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>879</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E738396" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="49908" e_stop="50241"/>
          <exon e_start="51375" e_stop="51919"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGCACAAACCCCATCAAACTTCTGACATCACTTTTCTCGATCCCCCGCCTATCGATACCACCACTGTCCACTGTCCGGCGGCGGCGGCGGCGGCGGATCACCACCTGGGATCTTCTTAAACCTCTCTAATTCTCTGCCCTATTCCTTATCACAGATCTAATTCAGTATTCTCAAACTGATTGAATCGACTCAGTAATGGCTGCGCAGAACCAAACGGATCAATTTGAGGCTTATTTTCGCAGAGCAGATTTGGATCAGGATGGTCGGATCAGTGGTGTTGAGGCTGTTTCCTTCTTTCAAGGCTCTAATTTGCCTAAACCAGTCCTTGCTCAGGTTCGTTCGTCCACTTCTGTCTTCTCTTATTGTCTTCCTTCTTCATCTATTAGAGTGAAGGAGAAGTAAGGAAATTGAAGCTAGTTATTGACAGTTTACCAAGTTATCATGTAGTATGCGTCTTTTTTCGGTGATTTGAATTGTTGCAAGTCCAGTTGCTACTATTACTTGTCAATCCGTATATGTTTTGAACCCCAACAATTTACCGCCAATGAAATCCAACAAACCGAGTAAGGAGAGTAGAGTATAGGTAGTAGACCTTACCCCCACCCAGTGAGCCTCACTTCTCATTGCAATGCCATGCCTTTCTACCTCTTCTTCCATGACTTGATTTATTGCTATTGATGGCTTATACCTGTTCTACTATTCTTGCTACAATTGAGTGGGCTCAATTCATTTTATTGTCAAATACTTTGAAGTGTTCCGGTTATTTGAGCTTTCAAATTGTTGCTAGACAGCAGGAATTGGGTGTTTTGGGATGAAAGACATGGTTTAATTTAGTAAAAAGAAGCAGAGAAATTCACAATTGTTGCGTTTGATGAATATTTGGAACTCAATGAAAACAATATGAAAACAGGTAGCAGATATGAGATACATGAAAAGTTTAGTCAGAGTATTAGTGAAATGGCTACATATTTTAATTTTTGAAATCTTAACGTTTATGTCCAGTAATATAACAAAATGAATAGCAATCTGGTAACTTAGAATAGAAGATAGTAAATAGTAGAGTTTGAAATTTGAAACTAGGACGACTACTAACATGTGTTAGAGCCACTTGAGAATGTAACAAAATTTGCAGATAGCTCCGTGGTTTAGGCTGCTTGAGTGGTAAGACTCAGATATTATTGTTGTTGATACTTGATAAAGTAGTGCAACAACAATTATGATGCTTGCCAGAAGACAGGTCTAGAAACAGATTGCAAGATAATCTAGATGTGGAAGAAGTTATAGATCGTAATTGTCCATCTGCAACTCCTGCTCCTGGATCTATCAATTTCCTCTTGTCTTCTTACTACAGTTCACGTGTTCTTTTGCCTTTATGCAGATATCTGCAGCTCCTGTCTAACGTCTGGATCTTTCATTTTTCCCATGTCTTCTTACTACAGTTAACGTGCTCTTTTGCCTTTATGCAGATATGGACATATGTTGATCAAAGTCGGACCGGTTTCCTTAGCCGTCAGGAATTTTTCAACTATCTTAAGCTTGTTACAGTGGCGCAGAAACGAGAGTTGACCCCAGAAATAGTGAAAGCTGCACTATTTACGCCAGCTTCAGCTAAAATTCCTGCCCCACAGATAAACCTTGCAGCTGTAGCAGGTCCTCGTCCAGCAAATAGAGTTGGTTCTGCAGTGCCTCCAGTTAGTCGTGCTGCTCCAACAGAAGCACCGAGTTTTGGCATTAGGGGTCAACAGGGTTTACCAGTTCCGCAGAGCCAGTATATGCGGCCTCCTCGACCCTCCGTTCAAAGCACCAGTTTCCCATCTCAATCAGGTGCTTCTAGTCATGGAATGCCTGGTGGTACCATGGCAGCTTTTAGTCAAGCCAATTCTTCTGATTGGCTTTCTGGTAATGGTGGCTCCCAAGCAGCTGTTACTTCCCAAGCTCCTAATATCAGTATAAATTCTAGAAGTCAGGAT-GGATTTGATCATGCTTCTCCACAACAGAACCAA-CAAAAGAC</genome_strand>
        <mrna_strand>CAG-TCAAACCCCATCAAACTTCTGACATCACTTTTCTCGATCCCCCGCCTATCGATACCACCACTGTCCACTGTCCGGCGGCGGCGGCGGCGGCGGATCACCACCTGGGATCTTCTTAAACCTCTCTAATTCTCTGCCCTATTCCTTATCACAGATCTAATTCAGTATTCTCAAACTGATTGAATCGACTCAGTAATGGCTGCGCAGAACCAAACGGATCAATTTGAGGCTTATTTTCGCAGAGCAGATTTGGATCAGGATGGTCGGATCAGTGGTGTTGAGGCTGTTTCCTTCTTTCAAGGCTCTAATTTGCCTAAACCAGTCCTTGCTCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATGGACATATGTTGATCAAAGTCGGACCGGTTTCCTTAGCCGTCAGGAATTTTTCAACTATCTTAAGCTTGTTACAGTGGCGCAGAAACGAGAGTTGACCCCAGAAATAGTGAAAGCTGCACTATTTACGCCAGCTTCAGCTAAAATTCCTGCCCCACAGATAAACCTTGCAGCTGTAGCAGGTCCTCGTCCAGCAAATAGAGTTGGTTCTGCAGTGCCTCCAGTTAGTCGTGCTGCTCCAACAGAAGCACCGAGTTTTGGCATTAGGGGTCAACAGGGTTTACCAGTTCCGCAGAGCCAGTATATGCGGCCTCCTCGACCCTCCGTTCAAAGCACCAGTTTCCCATCTCAATCAGGTGCTTCTAGTCATGGAATGCCTGGTGGTACCATGGCAGCTTTTAGTCAAGCCAATTCTTCTGATTGGCTTTCTGGTAATGGTGGCTCCCAAGCAGCTGTTACTTCCCAAGCTCCTAATATCAGTATAAATTCTAGAAGTCAGGATGGGATTTGATCATGCTTCTCCACAACAGAACCAACCAAAAGAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E322259" ref_strand="+" ref_description="SGN-E322259 [cTOB-24-P10]">
      <seq>acaaaccccatcaaacttctgacatcacttttctcgatcccccgcctatcgataccaccactgtccactgtccggcggcggcggcggcggcggatcaccacctgggatcttcttaaacctctctaattctctgccctattccttatcacagatctaattcagtattctcaaactgattgaatccactcagtaatggctgcgcagaaccaaacggatcaatttgaggcttattttcgcaaagcagatgtggatcacgatggtcggatcagtggcgctgaggctgcttccttctttcaaggctctaatttgcctaaaccagcccttgctcagatatggacatatgttgatcaaagtcggaccggtttccttagccgtcacgaatttttcaactatcttaagcttgttacagtggcgcatacacgagagttgaccccagaaatactgaaagctgcactatttacgccaacttcaactaaaattcctgccccacagataaaccttgcagctgtagaaggtcctcgtccaacaaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="+" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="49612" stop="51875"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="49912" g_stop="50241" g_length="330"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="330" r_length="330" r_score="0.976"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="50242" i_stop="51374" i_length="1133">
            <donor d_prob="0.998" d_score="0.96"/>
            <acceptor a_prob="0.997" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="51375" g_stop="51575" g_length="201"/>
          <reference_exon_boundary r_type="cDNA" r_start="331" r_stop="531" r_length="201" r_score="0.960"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="+" ref_id="SGN-E322259" ref_strand="+">
        <total_alignment_score>0.970</total_alignment_score>
        <cumulative_length_of_scored_exons>531</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E322259" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="49912" e_stop="50241"/>
          <exon e_start="51375" e_stop="51575"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAAACCCCATCAAACTTCTGACATCACTTTTCTCGATCCCCCGCCTATCGATACCACCACTGTCCACTGTCCGGCGGCGGCGGCGGCGGCGGATCACCACCTGGGATCTTCTTAAACCTCTCTAATTCTCTGCCCTATTCCTTATCACAGATCTAATTCAGTATTCTCAAACTGATTGAATCGACTCAGTAATGGCTGCGCAGAACCAAACGGATCAATTTGAGGCTTATTTTCGCAGAGCAGATTTGGATCAGGATGGTCGGATCAGTGGTGTTGAGGCTGTTTCCTTCTTTCAAGGCTCTAATTTGCCTAAACCAGTCCTTGCTCAGGTTCGTTCGTCCACTTCTGTCTTCTCTTATTGTCTTCCTTCTTCATCTATTAGAGTGAAGGAGAAGTAAGGAAATTGAAGCTAGTTATTGACAGTTTACCAAGTTATCATGTAGTATGCGTCTTTTTTCGGTGATTTGAATTGTTGCAAGTCCAGTTGCTACTATTACTTGTCAATCCGTATATGTTTTGAACCCCAACAATTTACCGCCAATGAAATCCAACAAACCGAGTAAGGAGAGTAGAGTATAGGTAGTAGACCTTACCCCCACCCAGTGAGCCTCACTTCTCATTGCAATGCCATGCCTTTCTACCTCTTCTTCCATGACTTGATTTATTGCTATTGATGGCTTATACCTGTTCTACTATTCTTGCTACAATTGAGTGGGCTCAATTCATTTTATTGTCAAATACTTTGAAGTGTTCCGGTTATTTGAGCTTTCAAATTGTTGCTAGACAGCAGGAATTGGGTGTTTTGGGATGAAAGACATGGTTTAATTTAGTAAAAAGAAGCAGAGAAATTCACAATTGTTGCGTTTGATGAATATTTGGAACTCAATGAAAACAATATGAAAACAGGTAGCAGATATGAGATACATGAAAAGTTTAGTCAGAGTATTAGTGAAATGGCTACATATTTTAATTTTTGAAATCTTAACGTTTATGTCCAGTAATATAACAAAATGAATAGCAATCTGGTAACTTAGAATAGAAGATAGTAAATAGTAGAGTTTGAAATTTGAAACTAGGACGACTACTAACATGTGTTAGAGCCACTTGAGAATGTAACAAAATTTGCAGATAGCTCCGTGGTTTAGGCTGCTTGAGTGGTAAGACTCAGATATTATTGTTGTTGATACTTGATAAAGTAGTGCAACAACAATTATGATGCTTGCCAGAAGACAGGTCTAGAAACAGATTGCAAGATAATCTAGATGTGGAAGAAGTTATAGATCGTAATTGTCCATCTGCAACTCCTGCTCCTGGATCTATCAATTTCCTCTTGTCTTCTTACTACAGTTCACGTGTTCTTTTGCCTTTATGCAGATATCTGCAGCTCCTGTCTAACGTCTGGATCTTTCATTTTTCCCATGTCTTCTTACTACAGTTAACGTGCTCTTTTGCCTTTATGCAGATATGGACATATGTTGATCAAAGTCGGACCGGTTTCCTTAGCCGTCAGGAATTTTTCAACTATCTTAAGCTTGTTACAGTGGCGCAGAAACGAGAGTTGACCCCAGAAATAGTGAAAGCTGCACTATTTACGCCAGCTTCAGCTAAAATTCCTGCCCCACAGATAAACCTTGCAGCTGTAGCAGGTCCTCGTCCAGCAAAT</genome_strand>
        <mrna_strand>ACAAACCCCATCAAACTTCTGACATCACTTTTCTCGATCCCCCGCCTATCGATACCACCACTGTCCACTGTCCGGCGGCGGCGGCGGCGGCGGATCACCACCTGGGATCTTCTTAAACCTCTCTAATTCTCTGCCCTATTCCTTATCACAGATCTAATTCAGTATTCTCAAACTGATTGAATCCACTCAGTAATGGCTGCGCAGAACCAAACGGATCAATTTGAGGCTTATTTTCGCAAAGCAGATGTGGATCACGATGGTCGGATCAGTGGCGCTGAGGCTGCTTCCTTCTTTCAAGGCTCTAATTTGCCTAAACCAGCCCTTGCTCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATGGACATATGTTGATCAAAGTCGGACCGGTTTCCTTAGCCGTCACGAATTTTTCAACTATCTTAAGCTTGTTACAGTGGCGCATACACGAGAGTTGACCCCAGAAATACTGAAAGCTGCACTATTTACGCCAACTTCAACTAAAATTCCTGCCCCACAGATAAACCTTGCAGCTGTAGAAGGTCCTCGTCCAACAAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E326361" ref_strand="+" ref_description="SGN-E326361 [cTOC-14-P16]">
      <seq>tgcagggctccaacatccagtaaaggccagcccaattgtttcacaagttgcacttccgcagaaaccagtaaatcagcatcagcaagctcagttgactgggagaccaaacaaacaggtcttagtgccaagtgctggtgcaaatcctaatgcagctggaaattctcgttccagtcagtctcagattccttggccaagaatgacccggtctgattatcagaagtacagcaaagtatttatggctgtggactcagacagggatggaaaaatttctggcctggaggcaaggaacctctttctaagttggaagctgcctcgagaggtgctgaaacaggtgtgggatttatctgatcaagacaacgacagcatgctgtctttaagggaattctgcattgcgctttacctgatggagcggcacagggaaggtcaccctcttccttcagtccttccgaccaatcttattttcgacgagtcgttattacctgcttctggtcagcctgtcccaccacatggtgctgttgcttggagacacacacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="+" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="51851" stop="54326"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52151" g_stop="52467" g_length="317"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="317" r_length="317" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="52468" i_stop="53809" i_length="1342">
            <donor d_prob="0.950" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="53810" g_stop="54026" g_length="217"/>
          <reference_exon_boundary r_type="cDNA" r_start="318" r_stop="534" r_length="217" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="+" ref_id="SGN-E326361" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>534</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E326361" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="52151" e_stop="52467"/>
          <exon e_start="53810" e_stop="54026"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCAGGGCTCCAACATCCAGTAAAGGCCAGCCCAATTGTTTCACAAGTTGCACTTCCGCAGAAACCAGTAAATCAGCATCAGCAAGCTCAGTTGACTGGGAGACCAAACAAACAGGTCTTAGTGCCAAGTGCTGGTGCAAATCCTAATGCAGCTGGAAATTCTCGTTCCAGTCAGTCTCAGATTCCTTGGCCAAGAATGACCCGGTCTGATTATCAGAAGTACAGCAAAGTATTTATGGCTGTGGACTCAGACAGGGATGGAAAAATTTCTGGCCTGGAGGCAAGGAACCTCTTTCTAAGTTGGAAGCTGCCTCGAGGTTTGATTTCCTTACTGCCATGATGATTTGTGAAATACCATGTTCATTCTGGTTTAATTCCGAGACAGATATTTATTTGGTAATTACAAATATCTATTAGTGGTTTTGTTTCGATCAACTGATTGTGTTATGTATCCTTTAGTTACTACCAAGTGATTTGGGACATCAATATTTGCTGCTGTTCTTGCAGTTGGAAGGCTTTAATTTGGATGATTGGGACTCTGGGACATTGATTGATCCCTGTGGTAGCTTGTAATTTTAGAAAGTTGGTCACGAGTTTGTTTGATTATTCTTTGTGGGAAGGGCGAGCTTAATGCCCCTTAATCTTCTTAAACTTGCTATTTGACTTTCAACTTCGGTAGCTGTGTTGTTCCGCAATTGTATTTTTAGAGAAATGATGTTTTATCAAATCTGCAGCGTTGGGGAAGTGCTGAAACAGTACAAGTGAACAAAAAACAAAAGAAAATCATGTTCTAATCGTACAGGGACCCTAAGAGGCTAAGTATTGATTCTGCTTCATATTTGAATTCATCTTTACACCCAAAAAAAAAAAAGTGTACACTCAGAATTGATTTGCTAGATTGAGTAATTGTACTTCATTTATTAACTAGAAGTACAAGTTGTCTCGATAAGAATTCCTTGATAAACTTATTTTTTAATTAGGTTTCATTAGTGATAGAGATTTAAGAGCCAAGTGGATATGTTAGAAATCCAATTATTCCTATAAAAGATAAATCATCTATCCTTAATTTTTTTCGTTTCAGAAAGCCGGTTTACTTCTTACAAACTATAATTCTTTGTTTGGAAGAGCTTAAACCAGATAAGTTATTTAGTTAATCATGATCTCCCTGTGAAATCGGCTATTTGAAATACTTATTTAGTTAATCATGATATCTCCCTGTGAAATTGGCTATTTGAAATACTTATGTTAGATGCACCATACTATTAAATAGTGGAACTTGATTAGGTAGCTCACTTCTTGCCTCCACAAACTTTTTCTTGCTTGGTAAGGGCTTTGCATCATAAGATTCTTAGGCTTACAGTGGTTATGGTTTTCATTCAAACATCTAGTAGCTTTTCTTGAAATTTGGAATGTGTGGCGACTCTTTACTTCTCAATAGTTCTGTATAGCGCATCGTTTTATGTTCCGTCGGGGTTATGCACTTCGTACTTTTAGCAGGCTACAATTTCCTTACAGGTCTTTTAAGATATTTTTGTGCTGTCTATTATGACCCTTGGCACAACATTCTTCTTGCTCATGAGAACTCATGCTGAATTTTCTTTATATCTCTTAGCTTTTGGTCCTCCAGAACAATAATATGGTATGCTTTTTGTTTGTCAGAGGTGCTGAAACAGGTGTGGGATTTATCTGATCAAGACAACGACAGCATGCTGTCTTTAAGGGAATTCTGCATTGCGCTTTACCTGATGGAGCGGCACAGGGAAGGTCACCCTCTTCCTTCAGTCCTTCCGACCAATCTTATTTTCGACGAGTCGTTATTACCTGCTTCTGGTCAGCCTGTCCCACCACATGGTGCTGTTGCTTGGAGACACACACC</genome_strand>
        <mrna_strand>TGCAGGGCTCCAACATCCAGTAAAGGCCAGCCCAATTGTTTCACAAGTTGCACTTCCGCAGAAACCAGTAAATCAGCATCAGCAAGCTCAGTTGACTGGGAGACCAAACAAACAGGTCTTAGTGCCAAGTGCTGGTGCAAATCCTAATGCAGCTGGAAATTCTCGTTCCAGTCAGTCTCAGATTCCTTGGCCAAGAATGACCCGGTCTGATTATCAGAAGTACAGCAAAGTATTTATGGCTGTGGACTCAGACAGGGATGGAAAAATTTCTGGCCTGGAGGCAAGGAACCTCTTTCTAAGTTGGAAGCTGCCTCGAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTGCTGAAACAGGTGTGGGATTTATCTGATCAAGACAACGACAGCATGCTGTCTTTAAGGGAATTCTGCATTGCGCTTTACCTGATGGAGCGGCACAGGGAAGGTCACCCTCTTCCTTCAGTCCTTCCGACCAATCTTATTTTCGACGAGTCGTTATTACCTGCTTCTGGTCAGCCTGTCCCACCACATGGTGCTGTTGCTTGGAGACACACACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E441044" ref_strand="+" ref_description="SGN-E441044 [cSTA-29-C7]">
      <seq>tgaaggaacctttttctaagttggaagctgcctcgagaggtgctgaaacaggtgtgggatttatctgatcaagacaatgacagcatgctgtctttaagggaattctgcattgctctttatctgatggagcggcacagggaaggtcaccctcttccttcagtccttccgaccaatcttattttcgatgagtcattattgcctgcttctggtcagcctgtcccaccacatggtgctgtcgcttggagacacacaccagcctcccagcaaacacaggggccaagggttccaggacagatggcttctggcgctccaggaaggcctccacgtccagttcccattccccagcccaatgaagctgtgcagcctggtcaacagaagcctaaagttcctgcact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="+" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="52133" stop="57296"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52432" g_stop="52467" g_length="36"/>
          <reference_exon_boundary r_type="cDNA" r_start="2" r_stop="37" r_length="36" r_score="0.944"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="52468" i_stop="53809" i_length="1342">
            <donor d_prob="0.950" d_score="0.00"/>
            <acceptor a_prob="0.997" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="53810" g_stop="54028" g_length="219"/>
          <reference_exon_boundary r_type="cDNA" r_start="38" r_stop="256" r_length="219" r_score="0.968"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="54029" i_stop="56854" i_length="2826">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="56855" g_stop="56996" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="257" r_stop="395" r_length="139" r_score="0.958"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="+" ref_id="SGN-E441044" ref_strand="+">
        <total_alignment_score>0.964</total_alignment_score>
        <cumulative_length_of_scored_exons>397</cumulative_length_of_scored_exons>
        <coverage percentage="1.005" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E441044" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="52432" e_stop="52467"/>
          <exon e_start="53810" e_stop="54028"/>
          <exon e_start="56855" e_stop="56996"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAGGAACCTCTTTCTAAGTTGGAAGCTGCCTCGAGGTTTGATTTCCTTACTGCCATGATGATTTGTGAAATACCATGTTCATTCTGGTTTAATTCCGAGACAGATATTTATTTGGTAATTACAAATATCTATTAGTGGTTTTGTTTCGATCAACTGATTGTGTTATGTATCCTTTAGTTACTACCAAGTGATTTGGGACATCAATATTTGCTGCTGTTCTTGCAGTTGGAAGGCTTTAATTTGGATGATTGGGACTCTGGGACATTGATTGATCCCTGTGGTAGCTTGTAATTTTAGAAAGTTGGTCACGAGTTTGTTTGATTATTCTTTGTGGGAAGGGCGAGCTTAATGCCCCTTAATCTTCTTAAACTTGCTATTTGACTTTCAACTTCGGTAGCTGTGTTGTTCCGCAATTGTATTTTTAGAGAAATGATGTTTTATCAAATCTGCAGCGTTGGGGAAGTGCTGAAACAGTACAAGTGAACAAAAAACAAAAGAAAATCATGTTCTAATCGTACAGGGACCCTAAGAGGCTAAGTATTGATTCTGCTTCATATTTGAATTCATCTTTACACCCAAAAAAAAAAAAGTGTACACTCAGAATTGATTTGCTAGATTGAGTAATTGTACTTCATTTATTAACTAGAAGTACAAGTTGTCTCGATAAGAATTCCTTGATAAACTTATTTTTTAATTAGGTTTCATTAGTGATAGAGATTTAAGAGCCAAGTGGATATGTTAGAAATCCAATTATTCCTATAAAAGATAAATCATCTATCCTTAATTTTTTTCGTTTCAGAAAGCCGGTTTACTTCTTACAAACTATAATTCTTTGTTTGGAAGAGCTTAAACCAGATAAGTTATTTAGTTAATCATGATCTCCCTGTGAAATCGGCTATTTGAAATACTTATTTAGTTAATCATGATATCTCCCTGTGAAATTGGCTATTTGAAATACTTATGTTAGATGCACCATACTATTAAATAGTGGAACTTGATTAGGTAGCTCACTTCTTGCCTCCACAAACTTTTTCTTGCTTGGTAAGGGCTTTGCATCATAAGATTCTTAGGCTTACAGTGGTTATGGTTTTCATTCAAACATCTAGTAGCTTTTCTTGAAATTTGGAATGTGTGGCGACTCTTTACTTCTCAATAGTTCTGTATAGCGCATCGTTTTATGTTCCGTCGGGGTTATGCACTTCGTACTTTTAGCAGGCTACAATTTCCTTACAGGTCTTTTAAGATATTTTTGTGCTGTCTATTATGACCCTTGGCACAACATTCTTCTTGCTCATGAGAACTCATGCTGAATTTTCTTTATATCTCTTAGCTTTTGGTCCTCCAGAACAATAATATGGTATGCTTTTTGTTTGTCAGAGGTGCTGAAACAGGTGTGGGATTTATCTGATCAAGACAACGACAGCATGCTGTCTTTAAGGGAATTCTGCATTGCGCTTTACCTGATGGAGCGGCACAGGGAAGGTCACCCTCTTCCTTCAGTCCTTCCGACCAATCTTATTTTCGACGAGTCGTTATTACCTGCTTCTGGTCAGCCTGTCCCACCACATGGTGCTGTTGCTTGGAGACACACACCAGGTAAATTTATTTCCTGTTTTTATAACAGTCATTATGCATGGCTCATGATTAGTGAATGCACATATGTGTATTAGCAAATAAAGCAGCTGATTCTGTTTTGATTAGTATATACAGGCATCTAAAGGCGTTTCTAAAGGTCTTGATTCTCTCCATCTATAGACTGAGGTTTTCAACTAGATACTTAAGGATGTTTGGATCGACTTTTTAAAGAAGCTTATAAGTTAAAATGCTAAAAGTCATAAATTGGTCATACCCAACTTATGCCTTTTAGCTTATTTTTGTACTTTTTTGACCTAAAAGTAGGTGTTACAAGCACTTTTTGTCATATCCAAACACTTCGAAAAATTAAATAGAGCTTAAAAGCCAAAAAGCTACTTAAAATAAGTCAATGCAAACAGCCTCTTAGACGCTTTCCCGTTACATGATATCAGAGCCTAAACTTCGGTAAGCCTGTTTCATACTTATAAGTCAGCATTCAAGTCATAGTGGGAAGCCCAAAAATCAAGTTACAAATGCGAAGGGTGTTGAGGTGTATAATATTTCCATTCCTATTTATGTCACACACTTCCTTTTTGTCCTTTCCCAAAAAGAATGATATTGGAAACAATTAACTTTATACTTCCCATTTTACCCTGAATGAGAAGCTTGTGTAACAGCACAAATGTTACAGCATGGTCAAGGCAACAAGATTCATATATTTTAGAGCTGCACAAATGCTATGACGTATTTTGGGTCACAAGTGGTCCAGTTTCCATTTTATTCTTTTAACTCTCTGTTGAGTCAAGCTAGGTCACATAAATTGGAACAAAGGAGATGTAAGGGCACTTGAAGTGGTCTTTAAATGTCTTGTTCCAATCAACCTTAACTTAAGGTTGTTGAGTTCGATGCTAAGATTCTTTCACTCTTTGCATTATAAGCATTTCATATGATGATAACTTTGTATATATAATGTGCCCAATTCACAATTTACTTAAACTTGAATCACAAAATATGAGTAGCCATATTTTGATCTGTAATAATATTATTTGAATGTCGAGAAATTATCTCTGAGCCTAAAATTTCCTCCAGAGCACGCCTTAATATATCTGTGTGTAGACCAAGTTTTATTGGATGAGAGGAGAGACTAAAAGTTGTCTTCTCTTTTTCTTCTACATATTTGGGAGTTAATTGTATGGCCAGTTACAAGCTGTTGTCATCTTTGTAGCTTTTAGAAATATATTAGCTATCACACCCAAGGGTGTGGCACAGTGTTCAATGAAGTGATAGAGAACCATGAGGTCCGGGGTCCAAATCTCGGTGGACGCAAAAACAGGGGTGGAGCTAGGGGTGTCAAATGGGTGTGTTGGGCTGAAATTGAAAATATTAAAATGGGTTGAGATAGAAGTCGGGTTGGGTCTTGAACTGCGTTGGGCTCAAATGGGCTTAAAAATGGTTGGGTTTTGACCTGCGCAATTTGACCCGATCAATCTTACTAATTTAACATATTGATATTTAACTTTTATAATTACAATTTGAATTTTAGCTCGAAATTATTTTTTTAAAAAGGTAACAAATGGATAGATAAACCCTAAAAGATGCTAAATAGATAATAATTTATACCTTAAATATAGAAACATATCTTAATAAAAAGTTTTAAAACGGGTTGAAATTGGAGATTGAATTGGGCTCAATTGAGGATTCTCTTCAAATGGGTTATGCTTGAATAGGTTGAGATTGAACCCAATTCAAATTATCTTGAGCCCAACCCTTAAAATTCTGGGCGGATTATCTATGTTTGGGTTCACTTTTGACACCCCTAGGTGGAGACAACTTTTGCCAAAGGGATCCAAAAAGGTAAAAAGAATTTTACCAATTATGTGAAGTTACCTTTTCTCAAAAAAAGGTAAAAAGAATGTCTCTTGTGAGACTCGAACCGACAACTGTGGGCTACACATTATGTCCTTCGGCCGCTGAGCTGCAGTGCATATTGTGTAAAGGGAATTCAACAACAAACCCAATGTAATTCCCCAAGTGGGGTTCGGGATGGTAGTGTGTACGCAAATCTTACTATTGCCTTCACAAGGCAGGGAGGCTTTTTCGAAGACCTTCGGCTTAAGTAGGAACGACTCATCAAAATATGTTTATACATGTCCGTCTCATACAATCAGATCAATCAATCAATCATCCCCGAGCAGCCTGTTAAGGGGATTCAAAACTTAATATTTATATATGATTTAGTAAATTGGCCTTATATATAAAGTGTAAGTTTCCGACAAAGGGGTTCAGTTGAACCCCCTTGTACCCCCCTAGTTCCACGCCTACGCAAAAGCACCAGGTGATTTCTTTTCATCTATCCATGCCTTAGTAGAAAGAGTTACCCGGTACCTGTGTTGATGGGAGGCTGTATTGGAGCTATATTTAAAGTTTCGAAAATAACATTTGTTTGAGCATTCAGGTATGAAATACAAGCATAAGGCTTCATACAATAGAAGTAAAAGCACTTTATATTTACTCGAAGAGAGTGCACCAAATAGAAGAAAGAGGAAATTAGTAGTATTTTGCAATCTATATATTTCATTTGAACCTCCTCCTATTTTCCAAGGTAGGTAGTTCCGGTTCCTAAATCAAACTCTCTTCCTCCTCATTTCAAGAAGGAAAGCTAACATCATCTAAAAATTTGTCCTCGTATTGCACGATATAATTCTAGTGTATATTGTATAGCAGAAAAAGCACTGTCAATCAGTCTAGGACTTCGGTAGTATGTTATTTGGTATCCATGTCAGTCTAGATAATTCTCCTCCTGTTTCTTGTCTTTTGATTTAGTTTCCTGATTCTTTTCATTTCCAGCCACCCAGCAAACACAGGGGCCAAGGGTTGTTCCAGGACAGATGGCTTCTGGCGCTCCAGGAAGGCCTCCACGTCCAGTTCCTATTCCCCAGCCCAATGAAGTTGTGCAGCCTGGTCAACAGAAGCCTAAAGTTCCTGCACT</genome_strand>
        <mrna_strand>GAAGGAACCTTTTTCTAAGTTGGAAGCTGCCTCGAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTGCTGAAACAGGTGTGGGATTTATCTGATCAAGACAATGACAGCATGCTGTCTTTAAGGGAATTCTGCATTGCTCTTTATCTGATGGAGCGGCACAGGGAAGGTCACCCTCTTCCTTCAGTCCTTCCGACCAATCTTATTTTCGATGAGTCATTATTGCCTGCTTCTGGTCAGCCTGTCCCACCACATGGTGCTGTCGCTTGGAGACACACACCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTCCCAGCAAACACAGGGGCCAA-GG--GTTCCAGGACAGATGGCTTCTGGCGCTCCAGGAAGGCCTCCACGTCCAGTTCCCATTCCCCAGCCCAATGAAGCTGTGCAGCCTGGTCAACAGAAGCCTAAAGTTCCTGCACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E407646" ref_strand="+" ref_description="SGN-E407646 [PPI-8-E9]">
      <seq>caaaagagaggttgagttattggctaaaaaatatgaagagaaatacaagcagacaggagacgttgcctctaaattgacaattgaagaggccacctttcgggatattcaggagaaaaaaatggagctatacaaggaaattgttaaaatggatcaagatggcaagactgatggtatccaggaccgtgctagtcacattcaggtgaatcttgaggagctagtaaaatcactgaatgaacggtgcaaaacttatggtttacgagctaaaccaactacactgcttgagcttccatttggttggcaaccaggcatccaagaggttgcagcagacttggatgaagagtgggataagtttgaagatgaaggattcacatttgtgaaagagctgacacttgatgtgaaaaacatcattgcccctcctaaaacaaagtcttcattggttcgcgagaaagcatcttctttagctgaacatgattctggaaaatcatctgctgatgcttatactgatgcaaagatagataagctgccaaaccatgtacaagctagagaagttagtgacatggaatctgcacatggacatcagcaaacagcaagaagtccaactgatagtccatcaaggagtaatgcagttgaaagcccgtcaaaagaattccaagagtctatgtacggga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="+" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="57914" stop="60319"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="58136" g_stop="58145" g_length="10"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="10" r_length="10" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="58146" i_stop="58218" i_length="73">
            <donor d_prob="0.995" d_score="0.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="58219" g_stop="58317" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="11" r_stop="109" r_length="99" r_score="0.980"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="58318" i_stop="58442" i_length="125">
            <donor d_prob="0.993" d_score="0.96"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="58443" g_stop="58511" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="110" r_stop="178" r_length="69" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="58512" i_stop="58587" i_length="76">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="58588" g_stop="58702" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="179" r_stop="293" r_length="115" r_score="0.991"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="58703" i_stop="59494" i_length="792">
            <donor d_prob="0.870" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="59495" g_stop="59563" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="294" r_stop="362" r_length="69" r_score="0.986"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="59564" i_stop="59713" i_length="150">
            <donor d_prob="0.902" d_score="0.98"/>
            <acceptor a_prob="0.973" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="59714" g_stop="60019" g_length="306"/>
          <reference_exon_boundary r_type="cDNA" r_start="363" r_stop="668" r_length="306" r_score="0.974"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="+" ref_id="SGN-E407646" ref_strand="+">
        <total_alignment_score>0.982</total_alignment_score>
        <cumulative_length_of_scored_exons>668</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E407646" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="58136" e_stop="58145"/>
          <exon e_start="58219" e_stop="58317"/>
          <exon e_start="58443" e_stop="58511"/>
          <exon e_start="58588" e_stop="58702"/>
          <exon e_start="59495" e_stop="59563"/>
          <exon e_start="59714" e_stop="60019"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAAGAGAGGTAAAAACTTTTCTCAACATAGGGAAACCACATCTCATATATGTTGTTTAACTTAAAATGGAGAATTTGACAGGTTGAGTTATTGGCTAAAAAATATGAAGAGAAATACAAGCAGACAGGAGACGTTGCTTCTAAATTGACCATTGAAGAGGCCACCTTTCGGGATATTCAGGTATTTGTGGATTTGTTTTGTCAAATGCATTGGTGTAAAGTTAACTTCCCTTTCTCATATTTTCTTTTAAATCATGTGAAATTGGCCTGTGTTTAAATGGTGTTATGTTGGTGAACCTTTTATAGGAGAAAAAAATGGAGCTATACAAGGAAATTGTTAAAATGGATCAAGATGGCAAGACTGATGGTATCCAGGTTGGAATATTGTCTCACTACTCAATTTGGAAGAGATAAGTTGAACTTTTTTGAAGCAATCATTTCTCTTTTATAGGACCGTGCTAGTCACATTCAGGTGAACCTTGAGGAGCTAGTAAAATCACTGAATGAACGGTGCAAAACTTATGGTTTACGAGCTAAACCAACTACACTGCTTGAGCTTCCATTTGGTAATTATACAAGTCTTTTATACTTAGTGTGAAGATATGAGCTTTCATTTGGTTGTCTCATCTATTGCTATATTTTTATTTTGAAATCAGTAAAATCTAATAAAGATCGTTTCAAAAATATAACTCCAATGCCTTGTTTTTGGGTGCTGAATTGTGACTTAAACTATTGTTCCTGAGAAGAATCTTGATGATAAAAAATGGTTCCCTGGAAGAAATTGTGATTCTAGCGGAGTCTGTTCTGTTTAAGAAGTGCCATTTGAGTTTCACCTATCTTGATTCTTGGCTAATAATATAATGAGCTGGACGGGCCTGCAAAAAGAATTTTCCATGAGGCACGTTAGCTGGACATTCGACCTCCTATAACAGAGATCCAAAATTCACTAGTCAATCTCAAGCCGAAGCCTTTCATTCTTCCAGCCAATTTGAGTGTATTCTTTATTGGGGCATTAGAATTAACTTGTTACCGACTGTTTATGGATTTGACTCTTTTGGCCAGTATTTCTCTAAAGAAACCTCAAATTCAAAATACGAGGTCTTCCCTCTTTATATTTACCTCATGACCATTTAGTACATGGTATGATGCTAATATTTTTCTTTGGAGATCCGTGTGTATTCTCCGTTGGTCTGCAATTTGTAGTGCCAAGTAGGAGGTGTGTGATGTATATAACTTTAGCCACTGGCACAAGCATTAAATTTATGATACCTAAGTTCAATGTGTTTTCTTGTCTGTGATTTTCGTTGATGTAAATTCTTTTCAAATGCTTTCTCATACTATTATTTGTATTTTCGAAGGTTGGCAACCAGGCATCCAAGAGGTTGCAGCAGACTGGGATGAAGAGTGGGATAAGTTTGAAGATGAAGGTATGTTTTAAGAAGTCAGCTTGTTAATCGAAGTGCTGACACTCAAAATGCCTCCAGAGGCCAGTGAATCAGTTTTATTTCTTCTTTGTGTTGCTTTTGGATGTGAGCGCAAATTTGGCTCACTTCGTTGTTGAACTCTTTTTCTTCCAGGATTCACATTTGTGAAAGAGCTGACACTCGATGTGAAAAACGTCATTGCCCCTCCTAAAACAAAGTCATCATTGGTTCGTGAGAAAGCATCTTCTTTAGCTGAACATGATTCTGGAAAATCATCTGCTGATGCTGATACTGATGCAAAGATAGATAAGCTGTCAAACCATGTACAAGCTAGAGAAGTTGGTGACATGGAATCTGCACATGGACATCAGCAAACAGCAAGAAGTCCAACTGATAGTCCATCAAGGAGTAATGCAGTTGAAAGCCCGTCAAAAGAAGTCCAAGAGTCTATGTACGGGA</genome_strand>
        <mrna_strand>CAAAAGAGAG.........................................................................GTTGAGTTATTGGCTAAAAAATATGAAGAGAAATACAAGCAGACAGGAGACGTTGCCTCTAAATTGACAATTGAAGAGGCCACCTTTCGGGATATTCAG.............................................................................................................................GAGAAAAAAATGGAGCTATACAAGGAAATTGTTAAAATGGATCAAGATGGCAAGACTGATGGTATCCAG............................................................................GACCGTGCTAGTCACATTCAGGTGAATCTTGAGGAGCTAGTAAAATCACTGAATGAACGGTGCAAAACTTATGGTTTACGAGCTAAACCAACTACACTGCTTGAGCTTCCATTTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGGCAACCAGGCATCCAAGAGGTTGCAGCAGACTTGGATGAAGAGTGGGATAAGTTTGAAGATGAAG......................................................................................................................................................GATTCACATTTGTGAAAGAGCTGACACTTGATGTGAAAAACATCATTGCCCCTCCTAAAACAAAGTCTTCATTGGTTCGCGAGAAAGCATCTTCTTTAGCTGAACATGATTCTGGAAAATCATCTGCTGATGCTTATACTGATGCAAAGATAGATAAGCTGCCAAACCATGTACAAGCTAGAGAAGTTAGTGACATGGAATCTGCACATGGACATCAGCAAACAGCAAGAAGTCCAACTGATAGTCCATCAAGGAGTAATGCAGTTGAAAGCCCGTCAAAAGAATTCCAAGAGTCTATGTACGGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E421353" ref_strand="+" ref_description="SGN-E421353 [STM-32-B6]">
      <seq>caaaagagaggttgagttattggctaaaaaatatgaagagaaatacaagcagacaggagacgttgcctctaaattgacaattgaagaggccacctttcgggatattcaggagaaaaaaatggagctatacaaggaaattgttaaaatggatcaagatggcaagactgatggtatccaggaccgtgctagtcacattcaggtgaatcttgaggagctagtaaaatcactgaatgaacggtgcaaaacttatggtttacgagctaaaccaactacactgcttgagcttccatttggttggcaaccaggcatccaagaggttgcagcagacttggatgaagagtgggataagtttgaagatgaaggattcacatttgtgaaagagctgacacttgatgtgaaaaacatcattgcccctcctaaaacaaagtcttcattggttcgcgagaaagcatcttctttagctgaacatgattctggaaaatcatctgctgatgcttatactgatgcaaagatagataagctgccaaacca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="+" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="57914" stop="60182"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="58136" g_stop="58145" g_length="10"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="10" r_length="10" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="58146" i_stop="58218" i_length="73">
            <donor d_prob="0.995" d_score="0.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="58219" g_stop="58317" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="11" r_stop="109" r_length="99" r_score="0.980"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="58318" i_stop="58442" i_length="125">
            <donor d_prob="0.993" d_score="0.96"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="58443" g_stop="58511" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="110" r_stop="178" r_length="69" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="58512" i_stop="58587" i_length="76">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="58588" g_stop="58702" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="179" r_stop="293" r_length="115" r_score="0.991"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="58703" i_stop="59494" i_length="792">
            <donor d_prob="0.870" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="59495" g_stop="59563" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="294" r_stop="362" r_length="69" r_score="0.986"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="59564" i_stop="59713" i_length="150">
            <donor d_prob="0.902" d_score="0.98"/>
            <acceptor a_prob="0.973" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="59714" g_stop="59882" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="363" r_stop="531" r_length="169" r_score="0.964"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="+" ref_id="SGN-E421353" ref_strand="+">
        <total_alignment_score>0.981</total_alignment_score>
        <cumulative_length_of_scored_exons>531</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E421353" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="58136" e_stop="58145"/>
          <exon e_start="58219" e_stop="58317"/>
          <exon e_start="58443" e_stop="58511"/>
          <exon e_start="58588" e_stop="58702"/>
          <exon e_start="59495" e_stop="59563"/>
          <exon e_start="59714" e_stop="59882"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAAGAGAGGTAAAAACTTTTCTCAACATAGGGAAACCACATCTCATATATGTTGTTTAACTTAAAATGGAGAATTTGACAGGTTGAGTTATTGGCTAAAAAATATGAAGAGAAATACAAGCAGACAGGAGACGTTGCTTCTAAATTGACCATTGAAGAGGCCACCTTTCGGGATATTCAGGTATTTGTGGATTTGTTTTGTCAAATGCATTGGTGTAAAGTTAACTTCCCTTTCTCATATTTTCTTTTAAATCATGTGAAATTGGCCTGTGTTTAAATGGTGTTATGTTGGTGAACCTTTTATAGGAGAAAAAAATGGAGCTATACAAGGAAATTGTTAAAATGGATCAAGATGGCAAGACTGATGGTATCCAGGTTGGAATATTGTCTCACTACTCAATTTGGAAGAGATAAGTTGAACTTTTTTGAAGCAATCATTTCTCTTTTATAGGACCGTGCTAGTCACATTCAGGTGAACCTTGAGGAGCTAGTAAAATCACTGAATGAACGGTGCAAAACTTATGGTTTACGAGCTAAACCAACTACACTGCTTGAGCTTCCATTTGGTAATTATACAAGTCTTTTATACTTAGTGTGAAGATATGAGCTTTCATTTGGTTGTCTCATCTATTGCTATATTTTTATTTTGAAATCAGTAAAATCTAATAAAGATCGTTTCAAAAATATAACTCCAATGCCTTGTTTTTGGGTGCTGAATTGTGACTTAAACTATTGTTCCTGAGAAGAATCTTGATGATAAAAAATGGTTCCCTGGAAGAAATTGTGATTCTAGCGGAGTCTGTTCTGTTTAAGAAGTGCCATTTGAGTTTCACCTATCTTGATTCTTGGCTAATAATATAATGAGCTGGACGGGCCTGCAAAAAGAATTTTCCATGAGGCACGTTAGCTGGACATTCGACCTCCTATAACAGAGATCCAAAATTCACTAGTCAATCTCAAGCCGAAGCCTTTCATTCTTCCAGCCAATTTGAGTGTATTCTTTATTGGGGCATTAGAATTAACTTGTTACCGACTGTTTATGGATTTGACTCTTTTGGCCAGTATTTCTCTAAAGAAACCTCAAATTCAAAATACGAGGTCTTCCCTCTTTATATTTACCTCATGACCATTTAGTACATGGTATGATGCTAATATTTTTCTTTGGAGATCCGTGTGTATTCTCCGTTGGTCTGCAATTTGTAGTGCCAAGTAGGAGGTGTGTGATGTATATAACTTTAGCCACTGGCACAAGCATTAAATTTATGATACCTAAGTTCAATGTGTTTTCTTGTCTGTGATTTTCGTTGATGTAAATTCTTTTCAAATGCTTTCTCATACTATTATTTGTATTTTCGAAGGTTGGCAACCAGGCATCCAAGAGGTTGCAGCAGACTGGGATGAAGAGTGGGATAAGTTTGAAGATGAAGGTATGTTTTAAGAAGTCAGCTTGTTAATCGAAGTGCTGACACTCAAAATGCCTCCAGAGGCCAGTGAATCAGTTTTATTTCTTCTTTGTGTTGCTTTTGGATGTGAGCGCAAATTTGGCTCACTTCGTTGTTGAACTCTTTTTCTTCCAGGATTCACATTTGTGAAAGAGCTGACACTCGATGTGAAAAACGTCATTGCCCCTCCTAAAACAAAGTCATCATTGGTTCGTGAGAAAGCATCTTCTTTAGCTGAACATGATTCTGGAAAATCATCTGCTGATGCTGATACTGATGCAAAGATAGATAAGCTGTCAAACCA</genome_strand>
        <mrna_strand>CAAAAGAGAG.........................................................................GTTGAGTTATTGGCTAAAAAATATGAAGAGAAATACAAGCAGACAGGAGACGTTGCCTCTAAATTGACAATTGAAGAGGCCACCTTTCGGGATATTCAG.............................................................................................................................GAGAAAAAAATGGAGCTATACAAGGAAATTGTTAAAATGGATCAAGATGGCAAGACTGATGGTATCCAG............................................................................GACCGTGCTAGTCACATTCAGGTGAATCTTGAGGAGCTAGTAAAATCACTGAATGAACGGTGCAAAACTTATGGTTTACGAGCTAAACCAACTACACTGCTTGAGCTTCCATTTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGGCAACCAGGCATCCAAGAGGTTGCAGCAGACTTGGATGAAGAGTGGGATAAGTTTGAAGATGAAG......................................................................................................................................................GATTCACATTTGTGAAAGAGCTGACACTTGATGTGAAAAACATCATTGCCCCTCCTAAAACAAAGTCTTCATTGGTTCGCGAGAAAGCATCTTCTTTAGCTGAACATGATTCTGGAAAATCATCTGCTGATGCTTATACTGATGCAAAGATAGATAAGCTGCCAAACCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E337664" ref_strand="+" ref_description="SGN-E337664 [cTOE-17-D17]">
      <seq>ttttgatggttcacccaatgctgcccaaagtgaacactggggtactgaatctgtgttctcgagggataaaggttttgatggatctggctggggtacatttgataccaactttgacactgatgctgcatgggacgtcaattctgttgcaaaggattcagatcatgacaatctcaaggaatcttctctttttggagatgatgattggggcttagcccctattaaaacggggtccaaacagtccaacacactaccgaatcaaatgccatcctttgattctgttcctagcacgccaagttacaatgctgggatagacaacacgttccccaaacaaagccctttctttgattctgttcctagcactccaagttacaatgctgggttcagttattcagacaacacattcccgaagcaaagccctttctttgattctgttccaagtaccccaagttacaactctggattcactcaaactgataacttgttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="+" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="59730" stop="61315"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="60160" g_stop="60189" g_length="30"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="30" r_length="30" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="60190" i_stop="60361" i_length="172">
            <donor d_prob="0.999" d_score="0.00"/>
            <acceptor a_prob="0.973" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="60362" g_stop="60482" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="31" r_stop="151" r_length="121" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="60483" i_stop="60682" i_length="200">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="60683" g_stop="61015" g_length="333"/>
          <reference_exon_boundary r_type="cDNA" r_start="152" r_stop="484" r_length="333" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="+" ref_id="SGN-E337664" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>484</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E337664" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="60160" e_stop="60189"/>
          <exon e_start="60362" e_stop="60482"/>
          <exon e_start="60683" e_stop="61015"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTGATGGTTCACCCAATGCTGCCCAAAGGTAATATGGTGGTTCTCTTCCTAGTTTTTGTGATTCAGTATACCACGTTCTTTTGTTTTGCGATGACCACAAGTTGCCTAGAATACTTAATTGTAGAGGGTTTTCACCTTCTACAAATTATTGTGTAGTTCCCTAGATATCTGAATCTCTTCGTTTGATTTTACGAGTGCAGTGAACACTGGGGTACTGAATCTGTGTTCTCGAGGGATAAAGGTTTTGATGGATCTGGCTGGGGTACATTTGATACCAACTTTGACACTGATGCTGCATGGGACGTCAATTCTGTTGCAAAGGTAAAAATAGATTATTTTGCATTTTCTTTTTCACTTTTGCAACTGCTTGGTTAGATGAAGACCTTATCATGTTGTAGAACATTATTGTCTAGGCAACCTTCTACTCGTTCGCAGAGTTTGTCTCGTTTCTTAGAATACCTTTGACATTATTTGAAAGCTGAAAGTCCACGTTATATTGCTTACTTTCTTTGTTTATGCAGGATTCAGATCATGACAATCTCAAGGAATCTTCTCTTTTTGGAGATGATGATTGGGGCTTAGCCCCTATTAAAACGGGGTCCAAACAGTCCAACACACTACCGAATCAAATGCCATCCTTTGATTCTGTTCCTAGCACGCCAAGTTACAATGCTGGGATAGACAACACGTTCCCCAAACAAAGCCCTTTCTTTGATTCTGTTCCTAGCACTCCAAGTTACAATGCTGGGTTCAGTTATTCAGACAACACATTCCCGAAGCAAAGCCCTTTCTTTGATTCTGTTCCAAGTACCCCAAGTTACAACTCTGGATTCACTCAGACTGATAACTTGTTC</genome_strand>
        <mrna_strand>TTTTGATGGTTCACCCAATGCTGCCCAAAG............................................................................................................................................................................TGAACACTGGGGTACTGAATCTGTGTTCTCGAGGGATAAAGGTTTTGATGGATCTGGCTGGGGTACATTTGATACCAACTTTGACACTGATGCTGCATGGGACGTCAATTCTGTTGCAAAG........................................................................................................................................................................................................GATTCAGATCATGACAATCTCAAGGAATCTTCTCTTTTTGGAGATGATGATTGGGGCTTAGCCCCTATTAAAACGGGGTCCAAACAGTCCAACACACTACCGAATCAAATGCCATCCTTTGATTCTGTTCCTAGCACGCCAAGTTACAATGCTGGGATAGACAACACGTTCCCCAAACAAAGCCCTTTCTTTGATTCTGTTCCTAGCACTCCAAGTTACAATGCTGGGTTCAGTTATTCAGACAACACATTCCCGAAGCAAAGCCCTTTCTTTGATTCTGTTCCAAGTACCCCAAGTTACAACTCTGGATTCACTCAAACTGATAACTTGTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E357704" ref_strand="+" ref_description="SGN-E357704 [cTOS-24-H15]">
      <seq>caactttgacactgatgctgcatgggacgtcaattctgttgcaaaggattcagatcatgacaatctcaaggaatcttctctttttggagatgatgattggggcttagcccctattaaaacggggtccaaacagtccaacacactaccgaatcaaatgccatcctttgattctgttcctagcacgccaagttacaatgctgggatagacaacacgttccccaaacaaagccctttctttgattctgttcctagcactccaagttacaatgctgggttcagttattcagacaacacattcccgaagcaaagccctttctttgattctgttccaagtaccccaagttacaactctggattcactcagactgataacttgttctcgaggcaaagtcccttctttgattctgttcctagcacaccagcttataattcaggaggctccccgaatgcagataatatgttccagaataagagtccgtttgcctttggggactcggttccaagcacacctatgtacagttctacaaactcgcctcgcagacatagtgaaggatttgaagaaaactcgaacagcttctccagatttgattcctttaacatgaatgatagtggcccctttggcacccgtgactctctttcaagatttgattcaatgcgcagcaccagagactctgactacgatcatggttcattccagcaacgggactcatttgctaggtttgattcatttcgcagcaccgcagactctgactataattttgggctct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="+" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="60137" stop="61703"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="60437" g_stop="60482" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="46" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="60483" i_stop="60682" i_length="200">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="60683" g_stop="61403" g_length="721"/>
          <reference_exon_boundary r_type="cDNA" r_start="47" r_stop="767" r_length="721" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="+" ref_id="SGN-E357704" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>767</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E357704" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="60437" e_stop="60482"/>
          <exon e_start="60683" e_stop="61403"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAACTTTGACACTGATGCTGCATGGGACGTCAATTCTGTTGCAAAGGTAAAAATAGATTATTTTGCATTTTCTTTTTCACTTTTGCAACTGCTTGGTTAGATGAAGACCTTATCATGTTGTAGAACATTATTGTCTAGGCAACCTTCTACTCGTTCGCAGAGTTTGTCTCGTTTCTTAGAATACCTTTGACATTATTTGAAAGCTGAAAGTCCACGTTATATTGCTTACTTTCTTTGTTTATGCAGGATTCAGATCATGACAATCTCAAGGAATCTTCTCTTTTTGGAGATGATGATTGGGGCTTAGCCCCTATTAAAACGGGGTCCAAACAGTCCAACACACTACCGAATCAAATGCCATCCTTTGATTCTGTTCCTAGCACGCCAAGTTACAATGCTGGGATAGACAACACGTTCCCCAAACAAAGCCCTTTCTTTGATTCTGTTCCTAGCACTCCAAGTTACAATGCTGGGTTCAGTTATTCAGACAACACATTCCCGAAGCAAAGCCCTTTCTTTGATTCTGTTCCAAGTACCCCAAGTTACAACTCTGGATTCACTCAGACTGATAACTTGTTCTCGAGGCAAAGTCCCTTCTTTGATTCTGTTCCTAGCACACCAGCTTATAATTCAGGAGGCTCCCCGAATGCAGATAATATGTTCCAGAATAAGAGTCCGTTTGCCTTTGGGGACTCGGTTCCCAGCACACCTATGTACAGTTCTACAAACTCGCCTCGCAGACATAGTGGAAAGATTTGAAG-AAACTCGAACAGCTTCTCCAGATTTGATCCCTTTAACATGAATGATAGTGGCCCCTTTGGCACCCGTGACTCTCTTTCAAGATTTGATTCAATGCGCAGCACCAGAGACTCTGACTACGATCATGGTTCATTCCAGCAACGGGACTCATTTGCTAGGTTTGATTCATTTCGCAGCACCGCAGACTCTGACTATAATTTTGGGCTCT</genome_strand>
        <mrna_strand>CAACTTTGACACTGATGCTGCATGGGACGTCAATTCTGTTGCAAAG........................................................................................................................................................................................................GATTCAGATCATGACAATCTCAAGGAATCTTCTCTTTTTGGAGATGATGATTGGGGCTTAGCCCCTATTAAAACGGGGTCCAAACAGTCCAACACACTACCGAATCAAATGCCATCCTTTGATTCTGTTCCTAGCACGCCAAGTTACAATGCTGGGATAGACAACACGTTCCCCAAACAAAGCCCTTTCTTTGATTCTGTTCCTAGCACTCCAAGTTACAATGCTGGGTTCAGTTATTCAGACAACACATTCCCGAAGCAAAGCCCTTTCTTTGATTCTGTTCCAAGTACCCCAAGTTACAACTCTGGATTCACTCAGACTGATAACTTGTTCTCGAGGCAAAGTCCCTTCTTTGATTCTGTTCCTAGCACACCAGCTTATAATTCAGGAGGCTCCCCGAATGCAGATAATATGTTCCAGAATAAGAGTCCGTTTGCCTTTGGGGACTCGGTTCCAAGCACACCTATGTACAGTTCTACAAACTCGCCTCGCAGACATAGT-GAAGGATTTGAAGAAAACTCGAACAGCTTCTCCAGATTTGATTCCTTTAACATGAATGATAGTGGCCCCTTTGGCACCCGTGACTCTCTTTCAAGATTTGATTCAATGCGCAGCACCAGAGACTCTGACTACGATCATGGTTCATTCCAGCAACGGGACTCATTTGCTAGGTTTGATTCATTTCGCAGCACCGCAGACTCTGACTATAATTTTGGGCTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E349857" ref_strand="+" ref_description="SGN-E349857 [cTOS-3-J21]">
      <seq>caactttgacactgatgctgcatgggacgtcaattctgttgcaaaggattcagatcatgacaatctcaaggaatcttctctttttggagatgatgattggggcttagcccctattaaaacggggtccaaacagtccaacacactaccgaatcaaatgccatcctttgattctgttcctagcacgccaagttacaatgctgggatagacaacacgttccccaaacaaagccctttctttgattctgttcctagcactccaagttacaatgctgggttcagttattcagacaacacattcccgaagcaaagccctttctttgattctgttccaagtaccccaagttacaactctggattcactcagactgataacttgttctcgaggcaaagtcccttctttgattctgttcctagcacaccagcttataattcaggaggctccccgaatgcagataatatgttccagaataagagtccgtttgcctttggggactcggttccaagcacacctatgtacagttctacaaactcgcctcgcagacatagtgaaggatttgaagaaaactcgaacagcttctccagatttgattcctttaacatgaatgatagtggcccctttggcacccgtgactctctttcaagatttgattcaatgcgcagcaccagagactctgactacgatcatggttcattccagcaacgggactcatttgctaggtttgattcatttcgcagcnacgcagactctgactataattttgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="+" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="60137" stop="61698"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="60437" g_stop="60482" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="46" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="60483" i_stop="60682" i_length="200">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="60683" g_stop="61398" g_length="716"/>
          <reference_exon_boundary r_type="cDNA" r_start="47" r_stop="762" r_length="716" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="+" ref_id="SGN-E349857" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>762</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E349857" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="60437" e_stop="60482"/>
          <exon e_start="60683" e_stop="61398"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAACTTTGACACTGATGCTGCATGGGACGTCAATTCTGTTGCAAAGGTAAAAATAGATTATTTTGCATTTTCTTTTTCACTTTTGCAACTGCTTGGTTAGATGAAGACCTTATCATGTTGTAGAACATTATTGTCTAGGCAACCTTCTACTCGTTCGCAGAGTTTGTCTCGTTTCTTAGAATACCTTTGACATTATTTGAAAGCTGAAAGTCCACGTTATATTGCTTACTTTCTTTGTTTATGCAGGATTCAGATCATGACAATCTCAAGGAATCTTCTCTTTTTGGAGATGATGATTGGGGCTTAGCCCCTATTAAAACGGGGTCCAAACAGTCCAACACACTACCGAATCAAATGCCATCCTTTGATTCTGTTCCTAGCACGCCAAGTTACAATGCTGGGATAGACAACACGTTCCCCAAACAAAGCCCTTTCTTTGATTCTGTTCCTAGCACTCCAAGTTACAATGCTGGGTTCAGTTATTCAGACAACACATTCCCGAAGCAAAGCCCTTTCTTTGATTCTGTTCCAAGTACCCCAAGTTACAACTCTGGATTCACTCAGACTGATAACTTGTTCTCGAGGCAAAGTCCCTTCTTTGATTCTGTTCCTAGCACACCAGCTTATAATTCAGGAGGCTCCCCGAATGCAGATAATATGTTCCAGAATAAGAGTCCGTTTGCCTTTGGGGACTCGGTTCCCAGCACACCTATGTACAGTTCTACAAACTCGCCTCGCAGACATAGTGGAAAGATTTGAAG-AAACTCGAACAGCTTCTCCAGATTTGATCCCTTTAACATGAATGATAGTGGCCCCTTTGGCACCCGTGACTCTCTTTCAAGATTTGATTCAATGCGCAGCACCAGAGACTCTGACTACGATCATGGTTCATTCCAGCAACGGGACTCATTTGCTAGGTTTGATTCATTTCGCAGCACCGCAGACTCTGACTATAATTTTGG</genome_strand>
        <mrna_strand>CAACTTTGACACTGATGCTGCATGGGACGTCAATTCTGTTGCAAAG........................................................................................................................................................................................................GATTCAGATCATGACAATCTCAAGGAATCTTCTCTTTTTGGAGATGATGATTGGGGCTTAGCCCCTATTAAAACGGGGTCCAAACAGTCCAACACACTACCGAATCAAATGCCATCCTTTGATTCTGTTCCTAGCACGCCAAGTTACAATGCTGGGATAGACAACACGTTCCCCAAACAAAGCCCTTTCTTTGATTCTGTTCCTAGCACTCCAAGTTACAATGCTGGGTTCAGTTATTCAGACAACACATTCCCGAAGCAAAGCCCTTTCTTTGATTCTGTTCCAAGTACCCCAAGTTACAACTCTGGATTCACTCAGACTGATAACTTGTTCTCGAGGCAAAGTCCCTTCTTTGATTCTGTTCCTAGCACACCAGCTTATAATTCAGGAGGCTCCCCGAATGCAGATAATATGTTCCAGAATAAGAGTCCGTTTGCCTTTGGGGACTCGGTTCCAAGCACACCTATGTACAGTTCTACAAACTCGCCTCGCAGACATAGT-GAAGGATTTGAAGAAAACTCGAACAGCTTCTCCAGATTTGATTCCTTTAACATGAATGATAGTGGCCCCTTTGGCACCCGTGACTCTCTTTCAAGATTTGATTCAATGCGCAGCACCAGAGACTCTGACTACGATCATGGTTCATTCCAGCAACGGGACTCATTTGCTAGGTTTGATTCATTTCGCAGCNACGCAGACTCTGACTATAATTTTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E357787" ref_strand="+" ref_description="SGN-E357787 [cTOS-24-E11]">
      <seq>caactttgacactgatgctgcatgggacgtcaattctgttgcaaaggattcagatcatgacaatctcaaggaatcttctctttttggagatgatgattggggcttagcccctattaaaacggggtccaaacagtccaacacactaccgaatcaaatgccatcctttgattctgttcctagcacgccaagttacaatgctgggatagacaacacgttccccaaacaaagccctttctttgattctgttcctagcactccaagttacaatgctgggttcagttattcagacaacacattcccgaagcaaagccctttctttgattctgttccaagtaccccaagttacaactctggattcactcagactgataacttgttctcgaggcaaagtcccttctttgattctgttcctagcacaccagcttataattcaggaggctccccgaatgcagataatatgttccagaataagagtccgtttgcctttggggactcggttccaagcacacctatgtacagttctacaaactcgcctcgcagacatagtgaaggatttgaagaaaactcgaacagcttctccagatttgattcctttaacatgaatgatagtggcccctttggcacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="+" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="60137" stop="61561"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="60437" g_stop="60482" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="46" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="60483" i_stop="60682" i_length="200">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="60683" g_stop="61261" g_length="579"/>
          <reference_exon_boundary r_type="cDNA" r_start="47" r_stop="625" r_length="579" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="+" ref_id="SGN-E357787" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>625</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E357787" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="60437" e_stop="60482"/>
          <exon e_start="60683" e_stop="61261"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAACTTTGACACTGATGCTGCATGGGACGTCAATTCTGTTGCAAAGGTAAAAATAGATTATTTTGCATTTTCTTTTTCACTTTTGCAACTGCTTGGTTAGATGAAGACCTTATCATGTTGTAGAACATTATTGTCTAGGCAACCTTCTACTCGTTCGCAGAGTTTGTCTCGTTTCTTAGAATACCTTTGACATTATTTGAAAGCTGAAAGTCCACGTTATATTGCTTACTTTCTTTGTTTATGCAGGATTCAGATCATGACAATCTCAAGGAATCTTCTCTTTTTGGAGATGATGATTGGGGCTTAGCCCCTATTAAAACGGGGTCCAAACAGTCCAACACACTACCGAATCAAATGCCATCCTTTGATTCTGTTCCTAGCACGCCAAGTTACAATGCTGGGATAGACAACACGTTCCCCAAACAAAGCCCTTTCTTTGATTCTGTTCCTAGCACTCCAAGTTACAATGCTGGGTTCAGTTATTCAGACAACACATTCCCGAAGCAAAGCCCTTTCTTTGATTCTGTTCCAAGTACCCCAAGTTACAACTCTGGATTCACTCAGACTGATAACTTGTTCTCGAGGCAAAGTCCCTTCTTTGATTCTGTTCCTAGCACACCAGCTTATAATTCAGGAGGCTCCCCGAATGCAGATAATATGTTCCAGAATAAGAGTCCGTTTGCCTTTGGGGACTCGGTTCCCAGCACACCTATGTACAGTTCTACAAACTCGCCTCGCAGACATAGTGGAAAGATTTGAAG-AAACTCGAACAGCTTCTCCAGATTTGATCCCTTTAACATGAATGATAGTGGCCCCTTTGGCACC</genome_strand>
        <mrna_strand>CAACTTTGACACTGATGCTGCATGGGACGTCAATTCTGTTGCAAAG........................................................................................................................................................................................................GATTCAGATCATGACAATCTCAAGGAATCTTCTCTTTTTGGAGATGATGATTGGGGCTTAGCCCCTATTAAAACGGGGTCCAAACAGTCCAACACACTACCGAATCAAATGCCATCCTTTGATTCTGTTCCTAGCACGCCAAGTTACAATGCTGGGATAGACAACACGTTCCCCAAACAAAGCCCTTTCTTTGATTCTGTTCCTAGCACTCCAAGTTACAATGCTGGGTTCAGTTATTCAGACAACACATTCCCGAAGCAAAGCCCTTTCTTTGATTCTGTTCCAAGTACCCCAAGTTACAACTCTGGATTCACTCAGACTGATAACTTGTTCTCGAGGCAAAGTCCCTTCTTTGATTCTGTTCCTAGCACACCAGCTTATAATTCAGGAGGCTCCCCGAATGCAGATAATATGTTCCAGAATAAGAGTCCGTTTGCCTTTGGGGACTCGGTTCCAAGCACACCTATGTACAGTTCTACAAACTCGCCTCGCAGACATAGT-GAAGGATTTGAAGAAAACTCGAACAGCTTCTCCAGATTTGATTCCTTTAACATGAATGATAGTGGCCCCTTTGGCACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E585478" ref_strand="+" ref_description="SGN-E585478 [67938]">
      <seq>cccctattaaaacggggtccaaacagtccatcaacacactaccgaatcaaatgccatcctttgattctgttcctagcacgccaagttacaatgctgggttagacaacacgttccctaagcaaagccctttctttgattctgttcctagcactccaagttacaatgctggattcagttattcagacaacacgttaccgaagcaaagccctttctttgattctgttccaagcaccccaagttacaactctggattcactcagactgataccttgttctcaaggcaaagtcccttctttgattctgttcctagcacaccagcttataattcaggaggctccccaaatgcagataatatgttccagaataagagtccatttgctttcggggactcagttcctagcacacctatgtacagttctacaaactcgccccgaagacatagtgaagggtttgaagaaaactcgaacagcttctccagatttgactcctttaacatgaatgatagtggcccctttggcactcgtgactctctttcaagatttgattcaatgcgcagcaccagagactctgactacgatcatggttcattccagcaacgggactcatttgctaggttcgattcatttcgcagcaccggagactctgactataattttgggctctttcctcctcgggaatcactaagtaggtttgattccatgagtagtaccaagggacacagatcatggtcatggtttcacatcttttgatgatgccgatccatttggttcaaatgacccatttaagacgtcggncgaagagtcagaccac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="+" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="60444" stop="61847"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="60744" g_stop="61548" g_length="805"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="810" r_length="810" r_score="0.944"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="+" ref_id="SGN-E585478" ref_strand="+">
        <total_alignment_score>0.944</total_alignment_score>
        <cumulative_length_of_scored_exons>805</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E585478" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="60744" e_stop="61548"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCCCTATTAAAACGGGGTCCAAACAGT-C--CAACACACTACCGAATCAAATGCCATCCTTTGATTCTGTTCCTAGCACGCCAAGTTACAATGCTGGGATAGACAACACGTTCCCCAAACAAAGCCCTTTCTTTGATTCTGTTCCTAGCACTCCAAGTTACAATGCTGGGTTCAGTTATTCAGACAACACATTCCCGAAGCAAAGCCCTTTCTTTGATTCTGTTCCAAGTACCCCAAGTTACAACTCTGGATTCACTCAGACTGATAACTTGTTCTCGAGGCAAAGTCCCTTCTTTGATTCTGTTCCTAGCACACCAGCTTATAATTCAGGAGGCTCCCCGAATGCAGATAATATGTTCCAGAATAAGAGTCCGTTTGCCTTTGGGGACTCGGTTCCCAGCACACCTATGTACAGTTCTACAAACTCGCCTCGCAGACATAGTGGAAAGATTTGAAG-AAACTCGAACAGCTTCTCCAGATTTGATCCCTTTAACATGAATGATAGTGGCCCCTTTGGCACCCGTGACTCTCTTTCAAGATTTGATTCAATGCGCAGCACCAGAGACTCTGACTACGATCATGGTTCATTCCAGCAACGGGACTCATTTGCTAGGTTTGATTCATTTCGCAGCACCGCAGACTCTGACTATAATTTTGGGCTCTTTCCTCCTCGCGAATCACTAAGTAGGTTTGATTCCATGAGTAGTACC-AGGGACACAGATCATCGTCATGGTTTCACATCTTTTGATGATGCGGATCCGTTCGGTTCAAATGACCCATTTAAGACGTCGGCCG-AGAGTCAGACACC</genome_strand>
        <mrna_strand>CCCCTATTAAAACGGGGTCCAAACAGTCCATCAACACACTACCGAATCAAATGCCATCCTTTGATTCTGTTCCTAGCACGCCAAGTTACAATGCTGGGTTAGACAACACGTTCCCTAAGCAAAGCCCTTTCTTTGATTCTGTTCCTAGCACTCCAAGTTACAATGCTGGATTCAGTTATTCAGACAACACGTTACCGAAGCAAAGCCCTTTCTTTGATTCTGTTCCAAGCACCCCAAGTTACAACTCTGGATTCACTCAGACTGATACCTTGTTCTCAAGGCAAAGTCCCTTCTTTGATTCTGTTCCTAGCACACCAGCTTATAATTCAGGAGGCTCCCCAAATGCAGATAATATGTTCCAGAATAAGAGTCCATTTGCTTTCGGGGACTCAGTTCCTAGCACACCTATGTACAGTTCTACAAACTCGCCCCGAAGACATAGT-GAAGGGTTTGAAGAAAACTCGAACAGCTTCTCCAGATTTGACTCCTTTAACATGAATGATAGTGGCCCCTTTGGCACTCGTGACTCTCTTTCAAGATTTGATTCAATGCGCAGCACCAGAGACTCTGACTACGATCATGGTTCATTCCAGCAACGGGACTCATTTGCTAGGTTCGATTCATTTCGCAGCACCGGAGACTCTGACTATAATTTTGGGCTCTTTCCTCCTCGGGAATCACTAAGTAGGTTTGATTCCATGAGTAGTACCAAGGGACACAGATCATGGTCATGGTTTCACATCTTTTGATGATGCCGATCCATTTGGTTCAAATGACCCATTTAAGACGTCGGNCGAAGAGTCAGACCAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E255129" ref_strand="+" ref_description="SGN-E255129 [cLEG-31-P4]">
      <seq>cccctattaaaacggggtccaaacagtccaacacactaccgaatcaaatgccatcctttgattctgttcctagcacgccaagttacaatgctgggatagacaacacgttccccaaacaaagccctttctttgattcgtgtattngccctagcactctaagttacaatgctgggttcagttattcagacaacacattcccgaagcaaagccctttctttgattctgttccaagtaccccaagttacaactctggattcactcagactgataacttgttctcgaggcaaagtcccttctttgattctgttcctagcacaccagcttataattcaggaggctccccgaatgcagataatatgttccagaataagagtccgtttgcctttggggactcggttccaagcacacctatgtacagttctacaaactc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="+" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="60444" stop="61467"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="60744" g_stop="61167" g_length="424"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="430" r_length="430" r_score="0.967"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="+" ref_id="SGN-E255129" ref_strand="+">
        <total_alignment_score>0.967</total_alignment_score>
        <cumulative_length_of_scored_exons>424</cumulative_length_of_scored_exons>
        <coverage percentage="0.986" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E255129" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="60744" e_stop="61167"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCCCTATTAAAACGGGGTCCAAACAGTCCAACACACTACCGAATCAAATGCCATCCTTTGATTCTGTTCCTAGCACGCCAAGTTACAATGCTGGGATAGACAACACGTTCCCCAAACAAAGCCCTTTCTTTGATTC-TG--TT---CCTAGCACTCCAAGTTACAATGCTGGGTTCAGTTATTCAGACAACACATTCCCGAAGCAAAGCCCTTTCTTTGATTCTGTTCCAAGTACCCCAAGTTACAACTCTGGATTCACTCAGACTGATAACTTGTTCTCGAGGCAAAGTCCCTTCTTTGATTCTGTTCCTAGCACACCAGCTTATAATTCAGGAGGCTCCCCGAATGCAGATAATATGTTCCAGAATAAGAGTCCGTTTGCCTTTGGGGACTCGGTTCCCAGCACACCTATGTACAGTTCTACAAACTC</genome_strand>
        <mrna_strand>CCCCTATTAAAACGGGGTCCAAACAGTCCAACACACTACCGAATCAAATGCCATCCTTTGATTCTGTTCCTAGCACGCCAAGTTACAATGCTGGGATAGACAACACGTTCCCCAAACAAAGCCCTTTCTTTGATTCGTGTATTNGCCCTAGCACTCTAAGTTACAATGCTGGGTTCAGTTATTCAGACAACACATTCCCGAAGCAAAGCCCTTTCTTTGATTCTGTTCCAAGTACCCCAAGTTACAACTCTGGATTCACTCAGACTGATAACTTGTTCTCGAGGCAAAGTCCCTTCTTTGATTCTGTTCCTAGCACACCAGCTTATAATTCAGGAGGCTCCCCGAATGCAGATAATATGTTCCAGAATAAGAGTCCGTTTGCCTTTGGGGACTCGGTTCCAAGCACACCTATGTACAGTTCTACAAACTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E409387" ref_strand="+" ref_description="SGN-E409387 [PPI-13-N22]">
      <seq>ttacaatgctgggttagacaacacgttccctaagcaaagccctttctttgattctgttcctagcactccaagttacaatgctggattcagttattcagacaacacgttaccgaagcaaagccctttctttgattctgttccaagcaccccaagttacaactctggattcactcaaactgataccttgttctcgaggcaaagtcccttatttgattctgttcctagcacaccagcttataattcaggaggctccccgaatgcagataatatgttccagaataagagtccgtttgccttcggggactcagttcctagcacacctatgtacagttctacaaactcgcctcgaagacatagtgaagggtttgaagaaaactcgaacagcttctccagatttgactcctttaacatgaatgatagtggcccctttggcactcgtgactctctttcaagatttgattcaatgcgcagcaccagagactctgactacgatcatggttcattccagcaacgggactcatttgctaggttcgattcatttcgcagcaccgcggactctgactataattttgggctctttcctcctcgcgaatcactaagtaggtttgattccatgagtagtacagggacacagatcatggtcatggtttcacattttttgatgatgccgatccatttgggtcaatgacccattta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="+" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="60526" stop="61823"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="60826" g_stop="61523" g_length="698"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="696" r_length="696" r_score="0.954"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="+" ref_id="SGN-E409387" ref_strand="+">
        <total_alignment_score>0.954</total_alignment_score>
        <cumulative_length_of_scored_exons>698</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E409387" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="60826" e_stop="61523"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTACAATGCTGGGATAGACAACACGTTCCCCAAACAAAGCCCTTTCTTTGATTCTGTTCCTAGCACTCCAAGTTACAATGCTGGGTTCAGTTATTCAGACAACACATTCCCGAAGCAAAGCCCTTTCTTTGATTCTGTTCCAAGTACCCCAAGTTACAACTCTGGATTCACTCAGACTGATAACTTGTTCTCGAGGCAAAGTCCCTTCTTTGATTCTGTTCCTAGCACACCAGCTTATAATTCAGGAGGCTCCCCGAATGCAGATAATATGTTCCAGAATAAGAGTCCGTTTGCCTTTGGGGACTCGGTTCCCAGCACACCTATGTACAGTTCTACAAACTCGCCTCGCAGACATAGTGGAAAGATTTGAAG-AAACTCGAACAGCTTCTCCAGATTTGATCCCTTTAACATGAATGATAGTGGCCCCTTTGGCACCCGTGACTCTCTTTCAAGATTTGATTCAATGCGCAGCACCAGAGACTCTGACTACGATCATGGTTCATTCCAGCAACGGGACTCATTTGCTAGGTTTGATTCATTTCGCAGCACCGCAGACTCTGACTATAATTTTGGGCTCTTTCCTCCTCGCGAATCACTAAGTAGGTTTGATTCCATGAGTAGTACCAGGGACACAGATCATCGTCATGGTTTCACATCTTTTGATGATGCGGATCCGTTCGGTTCAAATGACCCATTTA</genome_strand>
        <mrna_strand>TTACAATGCTGGGTTAGACAACACGTTCCCTAAGCAAAGCCCTTTCTTTGATTCTGTTCCTAGCACTCCAAGTTACAATGCTGGATTCAGTTATTCAGACAACACGTTACCGAAGCAAAGCCCTTTCTTTGATTCTGTTCCAAGCACCCCAAGTTACAACTCTGGATTCACTCAAACTGATACCTTGTTCTCGAGGCAAAGTCCCTTATTTGATTCTGTTCCTAGCACACCAGCTTATAATTCAGGAGGCTCCCCGAATGCAGATAATATGTTCCAGAATAAGAGTCCGTTTGCCTTCGGGGACTCAGTTCCTAGCACACCTATGTACAGTTCTACAAACTCGCCTCGAAGACATAGT-GAAGGGTTTGAAGAAAACTCGAACAGCTTCTCCAGATTTGACTCCTTTAACATGAATGATAGTGGCCCCTTTGGCACTCGTGACTCTCTTTCAAGATTTGATTCAATGCGCAGCACCAGAGACTCTGACTACGATCATGGTTCATTCCAGCAACGGGACTCATTTGCTAGGTTCGATTCATTTCGCAGCACCGCGGACTCTGACTATAATTTTGGGCTCTTTCCTCCTCGCGAATCACTAAGTAGGTTTGATTCCATGAGTAGTA-CAGGGACACAGATCATGGTCATGGTTTCACATTTTTTGATGATGCCGATCCATTTGGGTC-AATGACCCATTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E420146" ref_strand="+" ref_description="SGN-E420146 [STM-30-F2]">
      <seq>ctttgattctgttcctagcactccaagttacaatgctggattcagttattcagacaacacgttaccgaagcaaagccctttctttgattctgttccaagcaccccaagttacaactctggattcactcagactgataccttgttctcgaggcaaagtcccttatttgattctgttcctagcacaccagcttataattcaggaggctccccgaatgcagataatatgttccagaataagagtccgtttgccttcggggactcagttcctagcacacctatgtacagttctacaaactcgcctcgaagacatagtgaagggtttgaagaaaactcgaacagcttctccagatttgactcctttaacatgaatgatagtggcccctttggcactcgtgactctctttcaagatttgattcaatgcacagcaccagagactctgactacgatcatggttcattccagcaacgggactcatttgctaggttcgattcatttcgcagcaccgcagactctgactataattttgggctctttcctcctcgcgaatcactaagtaggtttgattccatgagtagtaccagggacacagatcatggtcatggtttcacatcatttgatgatgccgatccatttggttcaaatgacccattta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="+" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="60571" stop="61823"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="60871" g_stop="61523" g_length="653"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="653" r_length="653" r_score="0.962"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="+" ref_id="SGN-E420146" ref_strand="+">
        <total_alignment_score>0.962</total_alignment_score>
        <cumulative_length_of_scored_exons>653</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E420146" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="60871" e_stop="61523"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTGATTCTGTTCCTAGCACTCCAAGTTACAATGCTGGGTTCAGTTATTCAGACAACACATTCCCGAAGCAAAGCCCTTTCTTTGATTCTGTTCCAAGTACCCCAAGTTACAACTCTGGATTCACTCAGACTGATAACTTGTTCTCGAGGCAAAGTCCCTTCTTTGATTCTGTTCCTAGCACACCAGCTTATAATTCAGGAGGCTCCCCGAATGCAGATAATATGTTCCAGAATAAGAGTCCGTTTGCCTTTGGGGACTCGGTTCCCAGCACACCTATGTACAGTTCTACAAACTCGCCTCGCAGACATAGTGGAAAGATTTGAAG-AAACTCGAACAGCTTCTCCAGATTTGATCCCTTTAACATGAATGATAGTGGCCCCTTTGGCACCCGTGACTCTCTTTCAAGATTTGATTCAATGCGCAGCACCAGAGACTCTGACTACGATCATGGTTCATTCCAGCAACGGGACTCATTTGCTAGGTTTGATTCATTTCGCAGCACCGCAGACTCTGACTATAATTTTGGGCTCTTTCCTCCTCGCGAATCACTAAGTAGGTTTGATTCCATGAGTAGTACCAGGGACACAGATCATCGTCATGGTTTCACATCTTTTGATGATGCGGATCCGTTCGGTTCAAATGACCCATTTA</genome_strand>
        <mrna_strand>CTTTGATTCTGTTCCTAGCACTCCAAGTTACAATGCTGGATTCAGTTATTCAGACAACACGTTACCGAAGCAAAGCCCTTTCTTTGATTCTGTTCCAAGCACCCCAAGTTACAACTCTGGATTCACTCAGACTGATACCTTGTTCTCGAGGCAAAGTCCCTTATTTGATTCTGTTCCTAGCACACCAGCTTATAATTCAGGAGGCTCCCCGAATGCAGATAATATGTTCCAGAATAAGAGTCCGTTTGCCTTCGGGGACTCAGTTCCTAGCACACCTATGTACAGTTCTACAAACTCGCCTCGAAGACATAGT-GAAGGGTTTGAAGAAAACTCGAACAGCTTCTCCAGATTTGACTCCTTTAACATGAATGATAGTGGCCCCTTTGGCACTCGTGACTCTCTTTCAAGATTTGATTCAATGCACAGCACCAGAGACTCTGACTACGATCATGGTTCATTCCAGCAACGGGACTCATTTGCTAGGTTCGATTCATTTCGCAGCACCGCAGACTCTGACTATAATTTTGGGCTCTTTCCTCCTCGCGAATCACTAAGTAGGTTTGATTCCATGAGTAGTACCAGGGACACAGATCATGGTCATGGTTTCACATCATTTGATGATGCCGATCCATTTGGTTCAAATGACCCATTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E405746" ref_strand="+" ref_description="SGN-E405746 [PPI-1-B11]">
      <seq>ctttgattctgttcctagcactccaagttacaatgctggattcagttattcagacaacacgttaccgaagcaaagccctttctttgattctgttccaagcaccccaagttacaactctggattcactcagactgataccttgttctcgaggcaaagtcccttatttgattctgttcctagcacaccagcttataattcaggaggctccccgaatgcagataatatgttccagaataagagtccgtttgccttcggggactcagttcctagcacacctatgtacagttctacaaactcgcctcgaagacatagtgaagggtttgaagaaaactcgaacagcttctccagatttgactcctttaacatgaatgatagtggcccctttggcactcgtgactctctttcaagatttgattcaatgcacagcaccagagactctgactacgatcatggttcattccagcaacgggactcatttgctaggttcgattcatttcgcagcaccgcagactctgactataattttgggctctttccttctcgcgaatcactaagtaggtttgattccatgagtag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="+" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="60571" stop="61746"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="60871" g_stop="61446" g_length="576"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="576" r_length="576" r_score="0.964"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="+" ref_id="SGN-E405746" ref_strand="+">
        <total_alignment_score>0.964</total_alignment_score>
        <cumulative_length_of_scored_exons>576</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E405746" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="60871" e_stop="61446"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTGATTCTGTTCCTAGCACTCCAAGTTACAATGCTGGGTTCAGTTATTCAGACAACACATTCCCGAAGCAAAGCCCTTTCTTTGATTCTGTTCCAAGTACCCCAAGTTACAACTCTGGATTCACTCAGACTGATAACTTGTTCTCGAGGCAAAGTCCCTTCTTTGATTCTGTTCCTAGCACACCAGCTTATAATTCAGGAGGCTCCCCGAATGCAGATAATATGTTCCAGAATAAGAGTCCGTTTGCCTTTGGGGACTCGGTTCCCAGCACACCTATGTACAGTTCTACAAACTCGCCTCGCAGACATAGTGGAAAGATTTGAAG-AAACTCGAACAGCTTCTCCAGATTTGATCCCTTTAACATGAATGATAGTGGCCCCTTTGGCACCCGTGACTCTCTTTCAAGATTTGATTCAATGCGCAGCACCAGAGACTCTGACTACGATCATGGTTCATTCCAGCAACGGGACTCATTTGCTAGGTTTGATTCATTTCGCAGCACCGCAGACTCTGACTATAATTTTGGGCTCTTTCCTCCTCGCGAATCACTAAGTAGGTTTGATTCCATGAGTAG</genome_strand>
        <mrna_strand>CTTTGATTCTGTTCCTAGCACTCCAAGTTACAATGCTGGATTCAGTTATTCAGACAACACGTTACCGAAGCAAAGCCCTTTCTTTGATTCTGTTCCAAGCACCCCAAGTTACAACTCTGGATTCACTCAGACTGATACCTTGTTCTCGAGGCAAAGTCCCTTATTTGATTCTGTTCCTAGCACACCAGCTTATAATTCAGGAGGCTCCCCGAATGCAGATAATATGTTCCAGAATAAGAGTCCGTTTGCCTTCGGGGACTCAGTTCCTAGCACACCTATGTACAGTTCTACAAACTCGCCTCGAAGACATAGT-GAAGGGTTTGAAGAAAACTCGAACAGCTTCTCCAGATTTGACTCCTTTAACATGAATGATAGTGGCCCCTTTGGCACTCGTGACTCTCTTTCAAGATTTGATTCAATGCACAGCACCAGAGACTCTGACTACGATCATGGTTCATTCCAGCAACGGGACTCATTTGCTAGGTTCGATTCATTTCGCAGCACCGCAGACTCTGACTATAATTTTGGGCTCTTTCCTTCTCGCGAATCACTAAGTAGGTTTGATTCCATGAGTAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E614099" ref_strand="+" ref_description="SGN-E614099 [63881]">
      <seq>nttacaactctggattcactcagactgataccttgttcctcaaggcaaagtcccttctttgattctgttcctagcacaccagcttataattcaggaggctccccaaatgcagataatatgttccagaataagagtccatttgctttcggggactcagttcctagcacacctatgtacagttctacaaactcgccccgaagacatagtgaagggtttgaagaaaactcgaacagcttctccagatttgactcctttaacatgaatgatagtggcccctttggcactcgtgactctctttcaagatttgattcaatgcgcagcaccagagactctgactacgatcatggttcattccagcaacgggactcatttgctaggttcgattcatttcgcagcaccgcagactctgactataattttgggctctttcctcctcgcgaatcactaagtaggtttgattccatgagtagtaccagggacacagatcatggtcatggtttcacatcttttgatgatgccgatccatttggttcaaatgacccatttaagacgtcggccgagagtcagacaccaaggagaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="+" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="60679" stop="61857"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="60978" g_stop="61557" g_length="580"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="581" r_length="581" r_score="0.955"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="+" ref_id="SGN-E614099" ref_strand="+">
        <total_alignment_score>0.955</total_alignment_score>
        <cumulative_length_of_scored_exons>580</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E614099" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="60978" e_stop="61557"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTACAACTCTGGATTCACTCAGACTGATAACTTGTTC-TCGAGGCAAAGTCCCTTCTTTGATTCTGTTCCTAGCACACCAGCTTATAATTCAGGAGGCTCCCCGAATGCAGATAATATGTTCCAGAATAAGAGTCCGTTTGCCTTTGGGGACTCGGTTCCCAGCACACCTATGTACAGTTCTACAAACTCGCCTCGCAGACATAGTGGAAAGATTTGAAG-AAACTCGAACAGCTTCTCCAGATTTGATCCCTTTAACATGAATGATAGTGGCCCCTTTGGCACCCGTGACTCTCTTTCAAGATTTGATTCAATGCGCAGCACCAGAGACTCTGACTACGATCATGGTTCATTCCAGCAACGGGACTCATTTGCTAGGTTTGATTCATTTCGCAGCACCGCAGACTCTGACTATAATTTTGGGCTCTTTCCTCCTCGCGAATCACTAAGTAGGTTTGATTCCATGAGTAGTACCAGGGACACAGATCATCGTCATGGTTTCACATCTTTTGATGATGCGGATCCGTTCGGTTCAAATGACCCATTTAAGACGTCGGCCGAGAGTCAGACACCAAGGAGAGA</genome_strand>
        <mrna_strand>NTTACAACTCTGGATTCACTCAGACTGATACCTTGTTCCTCAAGGCAAAGTCCCTTCTTTGATTCTGTTCCTAGCACACCAGCTTATAATTCAGGAGGCTCCCCAAATGCAGATAATATGTTCCAGAATAAGAGTCCATTTGCTTTCGGGGACTCAGTTCCTAGCACACCTATGTACAGTTCTACAAACTCGCCCCGAAGACATAGT-GAAGGGTTTGAAGAAAACTCGAACAGCTTCTCCAGATTTGACTCCTTTAACATGAATGATAGTGGCCCCTTTGGCACTCGTGACTCTCTTTCAAGATTTGATTCAATGCGCAGCACCAGAGACTCTGACTACGATCATGGTTCATTCCAGCAACGGGACTCATTTGCTAGGTTCGATTCATTTCGCAGCACCGCAGACTCTGACTATAATTTTGGGCTCTTTCCTCCTCGCGAATCACTAAGTAGGTTTGATTCCATGAGTAGTACCAGGGACACAGATCATGGTCATGGTTTCACATCTTTTGATGATGCCGATCCATTTGGTTCAAATGACCCATTTAAGACGTCGGCCGAGAGTCAGACACCAAGGAGAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E609880" ref_strand="+" ref_description="SGN-E609880 [46372]">
      <seq>cgaatgcagataatatgttccagaataagagtcgtttgccttcggggactcagttcctagcacacctatgtacagttctacaaactcgcctcgaagacatagtgaagggtttgaagaaaactcgaacagcttctccagatttgactcctttaacatgaatgatagtggccctttggcactcgtgactctctttcaagatttgattcaatgcgcagccccagagactctgactacgatcatggttcattccagcaacgggactcatttgctaggttcgattcatttcgcagcaccgcagactctgactatagttttgggctctttcctcctcgcgaatcactaagtaggtttgattccatgagtagtaccagggacacagatcatggtcatggtttcacatcttttgatgatgccgatccatttggttcaaatgacccatttaagacgtcggccgagagtcagacaccaagggagagattctgatagttggaaagcgttttgatgggatggagtactagttacgaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="+" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="60780" stop="61899"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="61080" g_stop="61594" g_length="515"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="514" r_length="514" r_score="0.948"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="+" ref_id="SGN-E609880" ref_strand="+">
        <total_alignment_score>0.948</total_alignment_score>
        <cumulative_length_of_scored_exons>515</cumulative_length_of_scored_exons>
        <coverage percentage="0.981" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E609880" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="61080" e_stop="61594"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGAATGCAGATAATATGTTCCAGAATAAGAGTCCGTTTGCCTTTGGGGACTCGGTTCCCAGCACACCTATGTACAGTTCTACAAACTCGCCTCGCAGACATAGTGGAAAGATTTGAAG-AAACTCGAACAGCTTCTCCAGATTTGATCCCTTTAACATGAATGATAGTGGCCCCTTTGGCACCCGTGACTCTCTTTCAAGATTTGATTCAATGCGCAGCACCAGAGACTCTGACTACGATCATGGTTCATTCCAGCAACGGGACTCATTTGCTAGGTTTGATTCATTTCGCAGCACCGCAGACTCTGACTATAATTTTGGGCTCTTTCCTCCTCGCGAATCACTAAGTAGGTTTGATTCCATGAGTAGTACCAGGGACACAGATCATCGTCATGGTTTCACATCTTTTGATGATGCGGATCCGTTCGGTTCAAATGACCCATTTAAGACGTCGGCCGAGAGTCAGACACCAA-GGAGAGATTCTGATAGTTGGAAAGCGTTTTGACGGGATGATGGA</genome_strand>
        <mrna_strand>CGAATGCAGATAATATGTTCCAGAATAAGAGT-CGTTTGCCTTCGGGGACTCAGTTCCTAGCACACCTATGTACAGTTCTACAAACTCGCCTCGAAGACATAGT-GAAGGGTTTGAAGAAAACTCGAACAGCTTCTCCAGATTTGACTCCTTTAACATGAATGATAGTGG-CCCTTTGGCACTCGTGACTCTCTTTCAAGATTTGATTCAATGCGCAGCCCCAGAGACTCTGACTACGATCATGGTTCATTCCAGCAACGGGACTCATTTGCTAGGTTCGATTCATTTCGCAGCACCGCAGACTCTGACTATAGTTTTGGGCTCTTTCCTCCTCGCGAATCACTAAGTAGGTTTGATTCCATGAGTAGTACCAGGGACACAGATCATGGTCATGGTTTCACATCTTTTGATGATGCCGATCCATTTGGTTCAAATGACCCATTTAAGACGTCGGCCGAGAGTCAGACACCAAGGGAGAGATTCTGATAGTTGGAAAGCGTTTTGATGGGATGGAGTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E288696" ref_strand="+" ref_description="SGN-E288696 [cLES-8-I2]">
      <seq>gaatgcagataatatgttccagaataagagtccgtttgcctttggggactcggttccaagcacacctatgtacagttctacaaactcgcctcgcagacatagtgaaggatttgaagaaaactcgaacagcttctccagatttgattcctttaacatgaatgatagtggcccctttggcacccgtgactctctttcaagatttgattcaatgcgcagcaccagagactctgactacgatcatggttcattccagcaacgggactcatttgctaggtttgattcatttcgcagcaccgcagactctgactataattttgggctctttcctcctcgcgaatcactaagtaggtttgattccatgagtagtaccagggacacagatcatcgtcatggtttcacatcttttgatgatgcggatccgttcggttcaaatgacccatttaagacgtcggccgagagtcagacaccaaggagagattctgatagttggaaagcgttttga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="+" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="60781" stop="61882"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="61081" g_stop="61582" g_length="502"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="502" r_length="502" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="+" ref_id="SGN-E288696" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>502</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E288696" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="61081" e_stop="61582"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAATGCAGATAATATGTTCCAGAATAAGAGTCCGTTTGCCTTTGGGGACTCGGTTCCCAGCACACCTATGTACAGTTCTACAAACTCGCCTCGCAGACATAGTGGAAAGATTTGAAG-AAACTCGAACAGCTTCTCCAGATTTGATCCCTTTAACATGAATGATAGTGGCCCCTTTGGCACCCGTGACTCTCTTTCAAGATTTGATTCAATGCGCAGCACCAGAGACTCTGACTACGATCATGGTTCATTCCAGCAACGGGACTCATTTGCTAGGTTTGATTCATTTCGCAGCACCGCAGACTCTGACTATAATTTTGGGCTCTTTCCTCCTCGCGAATCACTAAGTAGGTTTGATTCCATGAGTAGTACCAGGGACACAGATCATCGTCATGGTTTCACATCTTTTGATGATGCGGATCCGTTCGGTTCAAATGACCCATTTAAGACGTCGGCCGAGAGTCAGACACCAAGGAGAGATTCTGATAGTTGGAAAGCGTTTTGA</genome_strand>
        <mrna_strand>GAATGCAGATAATATGTTCCAGAATAAGAGTCCGTTTGCCTTTGGGGACTCGGTTCCAAGCACACCTATGTACAGTTCTACAAACTCGCCTCGCAGACATAGT-GAAGGATTTGAAGAAAACTCGAACAGCTTCTCCAGATTTGATTCCTTTAACATGAATGATAGTGGCCCCTTTGGCACCCGTGACTCTCTTTCAAGATTTGATTCAATGCGCAGCACCAGAGACTCTGACTACGATCATGGTTCATTCCAGCAACGGGACTCATTTGCTAGGTTTGATTCATTTCGCAGCACCGCAGACTCTGACTATAATTTTGGGCTCTTTCCTCCTCGCGAATCACTAAGTAGGTTTGATTCCATGAGTAGTACCAGGGACACAGATCATCGTCATGGTTTCACATCTTTTGATGATGCGGATCCGTTCGGTTCAAATGACCCATTTAAGACGTCGGCCGAGAGTCAGACACCAAGGAGAGATTCTGATAGTTGGAAAGCGTTTTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E581928" ref_strand="+" ref_description="SGN-E581928 [7560]">
      <seq>tttgaagaaaactcgaacagttctccaggatttgactcctttaacatgaatgatagtggcccctttggccactcgtgactctctttcaagatttgattcaatgcgcagcaccaggagactctgactacgatcatgggttcattccagcaacgggactcatttgctcagttcgattcatttcgcagcaccggcagactctggactataggttttgggctctttcctcctcgcgaatcactaagtaggtttgattccatggagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="+" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="60891" stop="61744"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="61191" g_stop="61441" g_length="251"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="258" r_length="258" r_score="0.904"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="+" ref_id="SGN-E581928" ref_strand="+">
        <total_alignment_score>0.904</total_alignment_score>
        <cumulative_length_of_scored_exons>251</cumulative_length_of_scored_exons>
        <coverage percentage="0.958" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E581928" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="61191" e_stop="61441"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGAAG-AAACTCGAACAGCTTCTCCA-GATTTGATCCCTTTAACATGAATGATAGTGGCCCCTTTGG-CACCCGTGACTCTCTTTCAAGATTTGATTCAATGCGCAGCACCA-GAGACTCTGACTACGATCAT-GGTTCATTCCAGCAACGGGACTCATTTGCTAGGTTTGATTCATTTCGCAGCACC-GCAGACTCT-GACTATA-ATTTTGGGCTCTTTCCTCCTCGCGAATCACTAAGTAGGTTTGATTCCATG</genome_strand>
        <mrna_strand>TTTGAAGAAAACTCGAACAG-TTCTCCAGGATTTGACTCCTTTAACATGAATGATAGTGGCCCCTTTGGCCACTCGTGACTCTCTTTCAAGATTTGATTCAATGCGCAGCACCAGGAGACTCTGACTACGATCATGGGTTCATTCCAGCAACGGGACTCATTTGCTCAGTTCGATTCATTTCGCAGCACCGGCAGACTCTGGACTATAGGTTTTGGGCTCTTTCCTCCTCGCGAATCACTAAGTAGGTTTGATTCCATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E365630" ref_strand="-" ref_description="SGN-E365630 [cLPT-12-B6]">
      <seq>catggttcattccagcaacgggactcatttgctaggttttattcatttcgcagcaccgcagactctgactataattttgggctctttcctcctcgcgaatcactaagtaggtttgattccatgagtagtaccagggacacagatcatcgtcatggtttcacatcttttgatgatgcggatccatttggttcaaatgacccatttaagacgtcggccgagagtcagacaccaaggagagattctgatagttggaaagcgttttgacgggatgatggagtactagtgctaagtcattttattctatttcatttttatcatttggccagtttgttgtttgtaggtatgtaatgttgtgactagataaaaacatgtgtgcggcatgcgttgctatcaagatataagctgtgttgtactattattttattagcttgattttttttaaattccatgtgaattttgaccttttccaccacattattttttcggaacttcaaggtggacagaacttttgctggtcacccctattgaatgtataaagtgtataatgagccccttttctcaaaaaaaaaaaaaaaaaactcgagacta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="+" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="61019" stop="62176"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="61319" g_stop="61876" g_length="558"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="550" r_length="550" r_score="0.964"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="561" polyA_stop="579"/>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="+" ref_id="SGN-E365630" ref_strand="-">
        <total_alignment_score>0.964</total_alignment_score>
        <cumulative_length_of_scored_exons>558</cumulative_length_of_scored_exons>
        <coverage percentage="0.949" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E365630" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="61319" e_stop="61876"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATGGTTCATTCCAGCAACGGGACTCATTTGCTAGGTTTGATTCATTTCGCAGCACCGCAGACTCTGACTATAATTTTGGGCTCTTTCCTCCTCGCGAATCACTAAGTAGGTTTGATTCCATGAGTAGTACCAGGGACACAGATCATCGTCATGGTTTCACATCTTTTGATGATGCGGATCCGTTCGGTTCAAATGACCCATTTAAGACGTCGGCCGAGAGTCAGACACCAAGGAGAGATTCTGATAGTTGGAAAGCGTTTTGACGGGATGATGGAGTACTAGTGCTAAGTCATTTTATTCTATTTCATTTTTATCATTTGGCCAGTTTGTTGTTTGTAGGTATGTAATGTTGTGACTAGAT-AAAACATGTGTGCGGCATGCGTTGCTATCAAGATATAAGCTGTGTTGTACTATTA-TTTGTTAGCTTGATTTTATTTTTTTAAAAAAATATTCCATGTGAATTTTGACCTTTTCCACCACATTATTTTTTCGGAACTTCAAGGTGGACACAACTTTTGCTGGTCACCCATATTGAATGTATAAAGTGTATAATGAGC</genome_strand>
        <mrna_strand>CATGGTTCATTCCAGCAACGGGACTCATTTGCTAGGTTTTATTCATTTCGCAGCACCGCAGACTCTGACTATAATTTTGGGCTCTTTCCTCCTCGCGAATCACTAAGTAGGTTTGATTCCATGAGTAGTACCAGGGACACAGATCATCGTCATGGTTTCACATCTTTTGATGATGCGGATCCATTTGGTTCAAATGACCCATTTAAGACGTCGGCCGAGAGTCAGACACCAAGGAGAGATTCTGATAGTTGGAAAGCGTTTTGACGGGATGATGGAGTACTAGTGCTAAGTCATTTTATTCTATTTCATTTTTATCATTTGGCCAGTTTGTTGTTTGTAGGTATGTAATGTTGTGACTAGATAAAAACATGTGTGCGGCATGCGTTGCTATCAAGATATAAGCTGTGTTGTACTATTATTTTATTAGCTTGA---T-TTTTTTT-----AA-ATTCCATGTGAATTTTGACCTTTTCCACCACATTATTTTTTCGGAACTTCAAGGTGGACAGAACTTTTGCTGGTCACCCCTATTGAATGTATAAAGTGTATAATGAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E326674" ref_strand="+" ref_description="SGN-E326674 [cTOC-17-F9]">
      <seq>ttcattccagcaacgggactcatttgctaggtttgattcatttcgcagcaccgcagactctgactataattttgggctctttcctcctcgcgaatcactaagtaggtttgattccatgagtagtaccagggacacagatcatcgtcatggtttcacatcttttgatgatgcggatccgttcggttcaaatgacccatttaagacgtcggccgagagtcagacaccaaggagagattctgatagttggaaagcgttttgacgggatgatggagtactagtgctaagtcattttattctatttcatttttatcatttggccagtttgttgtttgtaggtatgtaatgttgtgactagataaaacatgtgtgcggcatgcgttgctatcaagatataagctgtgttgtactattatttgttagcttgattttatttttttaaaaaaatattccatgtgaattttgaccttttccaccacattattttttcggaacttcaaggtggacacaacttttgctggtcacccatattgaatgtataaagtgtataatgagcattttttatcagttgaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="+" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="61024" stop="62194"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="61324" g_stop="61891" g_length="568"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="568" r_length="568" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="569" polyA_stop="584"/>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="+" ref_id="SGN-E326674" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>568</cumulative_length_of_scored_exons>
        <coverage percentage="0.973" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E326674" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="61324" e_stop="61891"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCATTCCAGCAACGGGACTCATTTGCTAGGTTTGATTCATTTCGCAGCACCGCAGACTCTGACTATAATTTTGGGCTCTTTCCTCCTCGCGAATCACTAAGTAGGTTTGATTCCATGAGTAGTACCAGGGACACAGATCATCGTCATGGTTTCACATCTTTTGATGATGCGGATCCGTTCGGTTCAAATGACCCATTTAAGACGTCGGCCGAGAGTCAGACACCAAGGAGAGATTCTGATAGTTGGAAAGCGTTTTGACGGGATGATGGAGTACTAGTGCTAAGTCATTTTATTCTATTTCATTTTTATCATTTGGCCAGTTTGTTGTTTGTAGGTATGTAATGTTGTGACTAGATAAAACATGTGTGCGGCATGCGTTGCTATCAAGATATAAGCTGTGTTGTACTATTATTTGTTAGCTTGATTTTATTTTTTTAAAAAAATATTCCATGTGAATTTTGACCTTTTCCACCACATTATTTTTTCGGAACTTCAAGGTGGACACAACTTTTGCTGGTCACCCATATTGAATGTATAAAGTGTATAATGAGCATTTTTTATCAGTTG</genome_strand>
        <mrna_strand>TTCATTCCAGCAACGGGACTCATTTGCTAGGTTTGATTCATTTCGCAGCACCGCAGACTCTGACTATAATTTTGGGCTCTTTCCTCCTCGCGAATCACTAAGTAGGTTTGATTCCATGAGTAGTACCAGGGACACAGATCATCGTCATGGTTTCACATCTTTTGATGATGCGGATCCGTTCGGTTCAAATGACCCATTTAAGACGTCGGCCGAGAGTCAGACACCAAGGAGAGATTCTGATAGTTGGAAAGCGTTTTGACGGGATGATGGAGTACTAGTGCTAAGTCATTTTATTCTATTTCATTTTTATCATTTGGCCAGTTTGTTGTTTGTAGGTATGTAATGTTGTGACTAGATAAAACATGTGTGCGGCATGCGTTGCTATCAAGATATAAGCTGTGTTGTACTATTATTTGTTAGCTTGATTTTATTTTTTTAAAAAAATATTCCATGTGAATTTTGACCTTTTCCACCACATTATTTTTTCGGAACTTCAAGGTGGACACAACTTTTGCTGGTCACCCATATTGAATGTATAAAGTGTATAATGAGCATTTTTTATCAGTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E327096" ref_strand="+" ref_description="SGN-E327096 [cTOC-18-J8]">
      <seq>ttcattccagcaacgggactcatttgctaggtttgattcatttcgcagcaccgcagactctgactataattttgggctctttcctcctcgcgaatcactaagtaggtttgattccatgagtagtaccagggacacagatcatcgtcatggtttcacatcttttgatgatgcggatccgttcggttcaaatgacccatttaagacgtcggccgagagtcagacaccaaggagagattctgatagttggaaagcgttttgacgggatgatggagtactagtgctaagtcattttattctatttcatttttatcatttggccagtttgttgtttgtaggtatgtaatgttgtgactagataaaacatgtgtgcggcatgcgttgctatcaagatataagctgtgttgtactattatttgttagcttgattttatttttttaaaaaaatattccatgtgaattttgaccttttccaccacattattttttcggaacttcaaggtggacacaacttttgctggtcacccatattgaatgtataaagtgtataatgagcattttttatcagttgaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="+" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="61024" stop="62194"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="61324" g_stop="61891" g_length="568"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="568" r_length="568" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="569" polyA_stop="586"/>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="+" ref_id="SGN-E327096" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>568</cumulative_length_of_scored_exons>
        <coverage percentage="0.969" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E327096" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="61324" e_stop="61891"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCATTCCAGCAACGGGACTCATTTGCTAGGTTTGATTCATTTCGCAGCACCGCAGACTCTGACTATAATTTTGGGCTCTTTCCTCCTCGCGAATCACTAAGTAGGTTTGATTCCATGAGTAGTACCAGGGACACAGATCATCGTCATGGTTTCACATCTTTTGATGATGCGGATCCGTTCGGTTCAAATGACCCATTTAAGACGTCGGCCGAGAGTCAGACACCAAGGAGAGATTCTGATAGTTGGAAAGCGTTTTGACGGGATGATGGAGTACTAGTGCTAAGTCATTTTATTCTATTTCATTTTTATCATTTGGCCAGTTTGTTGTTTGTAGGTATGTAATGTTGTGACTAGATAAAACATGTGTGCGGCATGCGTTGCTATCAAGATATAAGCTGTGTTGTACTATTATTTGTTAGCTTGATTTTATTTTTTTAAAAAAATATTCCATGTGAATTTTGACCTTTTCCACCACATTATTTTTTCGGAACTTCAAGGTGGACACAACTTTTGCTGGTCACCCATATTGAATGTATAAAGTGTATAATGAGCATTTTTTATCAGTTG</genome_strand>
        <mrna_strand>TTCATTCCAGCAACGGGACTCATTTGCTAGGTTTGATTCATTTCGCAGCACCGCAGACTCTGACTATAATTTTGGGCTCTTTCCTCCTCGCGAATCACTAAGTAGGTTTGATTCCATGAGTAGTACCAGGGACACAGATCATCGTCATGGTTTCACATCTTTTGATGATGCGGATCCGTTCGGTTCAAATGACCCATTTAAGACGTCGGCCGAGAGTCAGACACCAAGGAGAGATTCTGATAGTTGGAAAGCGTTTTGACGGGATGATGGAGTACTAGTGCTAAGTCATTTTATTCTATTTCATTTTTATCATTTGGCCAGTTTGTTGTTTGTAGGTATGTAATGTTGTGACTAGATAAAACATGTGTGCGGCATGCGTTGCTATCAAGATATAAGCTGTGTTGTACTATTATTTGTTAGCTTGATTTTATTTTTTTAAAAAAATATTCCATGTGAATTTTGACCTTTTCCACCACATTATTTTTTCGGAACTTCAAGGTGGACACAACTTTTGCTGGTCACCCATATTGAATGTATAAAGTGTATAATGAGCATTTTTTATCAGTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E221033" ref_strand="+" ref_description="SGN-E221033 [cLEL-22-L15](-)">
      <seq>taaaaagtcggccgagagtcagacaccaaggagagattgtgatagttggaaagagttttgacgggatgatggagtactagtgctaagtcattttattctatttcatttttatcatttggccagtttgttgtttgtaggtatgtaatgttgtgactaaataaaacatgtgtgcggcatgcgttgctatcaagatataagctgtgttgtactattatttgttagcttgattttatttttttaaaaaaatattccatgtgaattttgaccttttccaccacattattttttcggaacttcaaggtggacacaacttttgctggtcacccatattgaatgtataaagtgtataatgaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="+" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="61222" stop="62174"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="61522" g_stop="61874" g_length="353"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="353" r_length="353" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="354" polyA_stop="379"/>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="+" ref_id="SGN-E221033" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>353</cumulative_length_of_scored_exons>
        <coverage percentage="0.931" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E221033" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="61522" e_stop="61874"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAGACGTCGGCCGAGAGTCAGACACCAAGGAGAGATTCTGATAGTTGGAAAGCGTTTTGACGGGATGATGGAGTACTAGTGCTAAGTCATTTTATTCTATTTCATTTTTATCATTTGGCCAGTTTGTTGTTTGTAGGTATGTAATGTTGTGACTAGATAAAACATGTGTGCGGCATGCGTTGCTATCAAGATATAAGCTGTGTTGTACTATTATTTGTTAGCTTGATTTTATTTTTTTAAAAAAATATTCCATGTGAATTTTGACCTTTTCCACCACATTATTTTTTCGGAACTTCAAGGTGGACACAACTTTTGCTGGTCACCCATATTGAATGTATAAAGTGTATAATGA</genome_strand>
        <mrna_strand>TAAAAAGTCGGCCGAGAGTCAGACACCAAGGAGAGATTGTGATAGTTGGAAAGAGTTTTGACGGGATGATGGAGTACTAGTGCTAAGTCATTTTATTCTATTTCATTTTTATCATTTGGCCAGTTTGTTGTTTGTAGGTATGTAATGTTGTGACTAAATAAAACATGTGTGCGGCATGCGTTGCTATCAAGATATAAGCTGTGTTGTACTATTATTTGTTAGCTTGATTTTATTTTTTTAAAAAAATATTCCATGTGAATTTTGACCTTTTCCACCACATTATTTTTTCGGAACTTCAAGGTGGACACAACTTTTGCTGGTCACCCATATTGAATGTATAAAGTGTATAATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E284623" ref_strand="+" ref_description="SGN-E284623 [cLES-3-N13]">
      <seq>ttttaaccaaatagatcatttttgtgtaattataacttcttgtagtaaattccaatcgtacatgaacatgaccctcacacccctcaacatactcaaaaataatagcttaacaaatgaattactagtaggaacaaagtgtggacttacttgccctttgcttatgaataaaaacaatctcttcaatatacatcttatgaaatgctatgaggaaaagaaactaagctttttttgcaaagatctccatcagggaagaagaggttccatagacggcaaaaattgtgcccatgacaatcaatgcagcatcagaagcaaaaccataccatctcaattcatctttgaacgcaattaagtgaaacaaagaaggcaacacaaatcccaaaacaatgcacacactgctcccaacaagtgacaagaaatcagcaaaattgggcaccgccaatgcaacaaaagtcactgctaaaaccacaagccatctcaaccacacacagtacct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="+" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="63930" stop="65019"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64227" g_stop="64719" g_length="493"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="493" r_length="493" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="+" ref_id="SGN-E284623" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>493</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E284623" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64227" e_stop="64719"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGATAACCAAATAGATCATTTTTGTGTAATTATAACTTCTTGTAGTAAATTCCAATCGTACATGAACATGACCCTCACACCCCTCAACATACTCAAAAATAATAGCTTAACAAATGAATTACTAGTAGGAACAAAGTGTGGACTTACTTGCCCTTTGCTTATGAATAAAAACAATCTCTTCAATATACATCTTATGAAATGCTATGAGGAAAAGAAACTAAGCTTTTTTTGCAAAGATCTCCATCAGGGAAGAAGAGGTTCCATAGACGGCAAAAATTGTGCCCATGACAATCAATGCAGCATCAGAAGCAAAACCATACCATCTCAATTCATCTTTGAACGCAATTAAGTGAAACAAAGAAGGCAACACAAATCCCAAAACAATGCACACACTGCTCCCAACAAGTGACAAGAAATCAGCAAAATTGGGCACCGCCAATGCAACAAAAGTCACTGCTAAAACCACAAGCCATCTCAACCACACACAGTACCT</genome_strand>
        <mrna_strand>TTTTAACCAAATAGATCATTTTTGTGTAATTATAACTTCTTGTAGTAAATTCCAATCGTACATGAACATGACCCTCACACCCCTCAACATACTCAAAAATAATAGCTTAACAAATGAATTACTAGTAGGAACAAAGTGTGGACTTACTTGCCCTTTGCTTATGAATAAAAACAATCTCTTCAATATACATCTTATGAAATGCTATGAGGAAAAGAAACTAAGCTTTTTTTGCAAAGATCTCCATCAGGGAAGAAGAGGTTCCATAGACGGCAAAAATTGTGCCCATGACAATCAATGCAGCATCAGAAGCAAAACCATACCATCTCAATTCATCTTTGAACGCAATTAAGTGAAACAAAGAAGGCAACACAAATCCCAAAACAATGCACACACTGCTCCCAACAAGTGACAAGAAATCAGCAAAATTGGGCACCGCCAATGCAACAAAAGTCACTGCTAAAACCACAAGCCATCTCAACCACACACAGTACCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E265460" ref_strand="+" ref_description="SGN-E265460 [cLEI-9-D8]">
      <seq>ttttttttttaaccaaatagatcatttttgtgtaattataacttcttgtagtaaattccaatcgtacatgaacatgaccctcacacccctcaacatactcaaaaataatagcttaacaaatgaattactagtaggaacaaagtgtggacttacttgccctttgcttatgaataaaaacaatctcttcaatatacatcttatgaaatgctatgaggaaaagaaactaagctttttttgcaaagatctccatcagggaagaagaggttccatagacggcaaaaattgtgcccatgacaatcaatgcagcatcagaagcaaaaccataccatctcaattcatctttgaacgcaattaagtgaaacaaagaaggcaacacaaatcccaaaacaatgcacacactgctcccaacaagtgacaagaaatcagcaaaattgggcaccgccaatgcaacaaaagtcactgctaaaaccacaagccatctcaaccacacacagtacctgccttcccagaatctcctttccattacttcatagactggattcatcataagggggaaagagaaaaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="+" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="63930" stop="65086"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64229" g_stop="64786" g_length="558"/>
          <reference_exon_boundary r_type="cDNA" r_start="9" r_stop="566" r_length="558" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="+" ref_id="SGN-E265460" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>558</cumulative_length_of_scored_exons>
        <coverage percentage="0.986" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E265460" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64229" e_stop="64786"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATAACCAAATAGATCATTTTTGTGTAATTATAACTTCTTGTAGTAAATTCCAATCGTACATGAACATGACCCTCACACCCCTCAACATACTCAAAAATAATAGCTTAACAAATGAATTACTAGTAGGAACAAAGTGTGGACTTACTTGCCCTTTGCTTATGAATAAAAACAATCTCTTCAATATACATCTTATGAAATGCTATGAGGAAAAGAAACTAAGCTTTTTTTGCAAAGATCTCCATCAGGGAAGAAGAGGTTCCATAGACGGCAAAAATTGTGCCCATGACAATCAATGCAGCATCAGAAGCAAAACCATACCATCTCAATTCATCTTTGAACGCAATTAAGTGAAACAAAGAAGGCAACACAAATCCCAAAACAATGCACACACTGCTCCCAACAAGTGACAAGAAATCAGCAAAATTGGGCACCGCCAATGCAACAAAAGTCACTGCTAAAACCACAAGCCATCTCAACCACACACAGTACCTGCCTTCCCAGAATCTCCTTTCCATTACTTCATAGACTGGATTCATCATAAGGGGGAAAGAGAAAAAC</genome_strand>
        <mrna_strand>TTAACCAAATAGATCATTTTTGTGTAATTATAACTTCTTGTAGTAAATTCCAATCGTACATGAACATGACCCTCACACCCCTCAACATACTCAAAAATAATAGCTTAACAAATGAATTACTAGTAGGAACAAAGTGTGGACTTACTTGCCCTTTGCTTATGAATAAAAACAATCTCTTCAATATACATCTTATGAAATGCTATGAGGAAAAGAAACTAAGCTTTTTTTGCAAAGATCTCCATCAGGGAAGAAGAGGTTCCATAGACGGCAAAAATTGTGCCCATGACAATCAATGCAGCATCAGAAGCAAAACCATACCATCTCAATTCATCTTTGAACGCAATTAAGTGAAACAAAGAAGGCAACACAAATCCCAAAACAATGCACACACTGCTCCCAACAAGTGACAAGAAATCAGCAAAATTGGGCACCGCCAATGCAACAAAAGTCACTGCTAAAACCACAAGCCATCTCAACCACACACAGTACCTGCCTTCCCAGAATCTCCTTTCCATTACTTCATAGACTGGATTCATCATAAGGGGGAAAGAGAAAAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E744466" ref_strand="+" ref_description="SGN-E744466 [GI|399605]">
      <seq>aagaaggcaacacaaatcccaaaacaatgcacacactgctcccaacaagtgaaagaatcagcaacaattgggcaccgccaatgcaacaaaagtcactgctaaaaccacaagccatctcaaccacacacagtacctgccttcccagaatctcctttccattacttcatagactggattcatcataagggggaaagagaaaaacaggtttatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="+" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="64284" stop="65095"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64584" g_stop="64795" g_length="212"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="211" r_length="211" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="+" ref_id="SGN-E744466" ref_strand="+">
        <total_alignment_score>0.981</total_alignment_score>
        <cumulative_length_of_scored_exons>212</cumulative_length_of_scored_exons>
        <coverage percentage="1.005" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E744466" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64584" e_stop="64795"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGAAGGCAACACAAATCCCAAAACAATGCACACACTGCTCCCAACAAGTGACAAGAAATCAGCAA-AATTGGGCACCGCCAATGCAACAAAAGTCACTGCTAAAACCACAAGCCATCTCAACCACACACAGTACCTGCCTTCCCAGAATCTCCTTTCCATTACTTCATAGACTGGATTCATCATAAGGGGGAAAGAGAAAAACAGGTTTATG</genome_strand>
        <mrna_strand>AAGAAGGCAACACAAATCCCAAAACAATGCACACACTGCTCCCAACAAGTGA-AAG-AATCAGCAACAATTGGGCACCGCCAATGCAACAAAAGTCACTGCTAAAACCACAAGCCATCTCAACCACACACAGTACCTGCCTTCCCAGAATCTCCTTTCCATTACTTCATAGACTGGATTCATCATAAGGGGGAAAGAGAAAAACAGGTTTATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E309190" ref_strand="+" ref_description="SGN-E309190 [cLEZ-12-M7]">
      <seq>tttcacccaaggcagcttatatatggggctgtttcccatttcagttgggattgaattcaatacctactctgacccttttagcccctttaagtatttttgctgatattgctgaattaggagctatgggtgtggtgatggttgaggatgtgatgatttaccttcagaacaggcctgttcttgaaatgtttggtgggttcaatgtgtttttctatggacttggtgtggctgtgtatgcttttgaagggattggtatggtcttacctctggaatcacagacaagagacaaggacaagtttgggaaaatcttgggattggcaatgggcttcatatcattgctgtttggtgcttttggagtattgggctactttgcatttggggaagacactaaagatataatcactacaaatcttgggcagggattgctcagcacctttgttcaacttggcctttgcataaacctgtttttctctttcccccttatgatgaatccagtctatgaagtaatggaaaggagattctggga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="-" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="65546" stop="64424"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="65246" g_stop="64724" g_length="523"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="523" r_length="523" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="-" ref_id="SGN-E309190" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>523</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E309190" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="65246" e_stop="64724"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCACCCAAGGCAGCTTATATATGGGGCTGTTTCCCATTTCAGTTGGGATTGAATTCAATACCTACTCTGACCCTTTTAGCCCCTTTAAGTATTTTTGCTGATATTGCTGAATTAGGAGCTATGGGTGTGGTGATGGTTGAGGATGTGATGATTTACCTTCAGAACAGGCCTGTTCTTGAAATGTTTGGTGGGTTCAATGTGTTTTTCTATGGACTTGGTGTGGCTGTGTATGCTTTTGAAGGGATTGGTATGGTCTTACCTCTGGAATCAGAGACAAGAGACAAGGACAAGTTTGGGAAAATCTTGGGATTGGCAATGGGCTTCATATCATTGCTGTTTGGTGCTTTTGGAGTATTGGGCTACTTTGCATTTGGGGAAGACACTAAAGATATAATCACTACAAATCTTGGGCAGGGATTGCTCAGCACCTTTGTTCAACTTGGCCTTTGCATAAACCTGTTTTTCTCTTTCCCCCTTATGATGAATCCAGTCTATGAAGTAATGGAAAGGAGATTCTGGGA</genome_strand>
        <mrna_strand>TTTCACCCAAGGCAGCTTATATATGGGGCTGTTTCCCATTTCAGTTGGGATTGAATTCAATACCTACTCTGACCCTTTTAGCCCCTTTAAGTATTTTTGCTGATATTGCTGAATTAGGAGCTATGGGTGTGGTGATGGTTGAGGATGTGATGATTTACCTTCAGAACAGGCCTGTTCTTGAAATGTTTGGTGGGTTCAATGTGTTTTTCTATGGACTTGGTGTGGCTGTGTATGCTTTTGAAGGGATTGGTATGGTCTTACCTCTGGAATCACAGACAAGAGACAAGGACAAGTTTGGGAAAATCTTGGGATTGGCAATGGGCTTCATATCATTGCTGTTTGGTGCTTTTGGAGTATTGGGCTACTTTGCATTTGGGGAAGACACTAAAGATATAATCACTACAAATCTTGGGCAGGGATTGCTCAGCACCTTTGTTCAACTTGGCCTTTGCATAAACCTGTTTTTCTCTTTCCCCCTTATGATGAATCCAGTCTATGAAGTAATGGAAAGGAGATTCTGGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E704264" ref_strand="+" ref_description="SGN-E704264 [FA23DC04]">
      <seq>cttcttggcaagattcaacatctttcttctccttccaagacttttgctaatgttttcatagccatagttggagctggagttcttggtcttccttacacctttaagagaactggatgggttatgggttctatcatgctcttctcagttgcctttcttacctactactgtatgatgcttttggtctattcaaggcgtaagattgaatcccacataaaagctgcaaaaatttcatcttttggtgatttggggtttgctgtgtgtggacctgttggtagattgtctgttgatcttatgattattctatctcaagctggtttttgcgttagctacttgatttttgtggctaatactttggcatatttgttcaattattcaattgcaaaacctgatcccaaaatcttgggactttcacccaaggcagcttatatatggggctgtttcccatttcagttgggattgaattcaatacctactctgacccttttagcccctttaagtatttttgctgatattgctgaattaggagctatgggtgtggtgatggttgaggatgtgatgatttaccttcagaacaggcctgttcttgaaatgtttggtgggttcaatgtgtttttctatggacttggtgtggctgtgtatgcttttgaagggattggtatggtcttacctctggaatcagagacaagagacaaggaccaatttgggaaaatcttgggattggcaatgggcttcatatcattg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="-" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="65952" stop="64612"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="65652" g_stop="64912" g_length="741"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="741" r_length="741" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="-" ref_id="SGN-E704264" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>741</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E704264" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="65652" e_stop="64912"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTCTTGGCAAGATTCAACATCTTTCTTCTCCTTCCAAGACTTTTGCTAATGTTTTCATAGCCATAGTTGGAGCTGGAGTTCTTGGTCTTCCTTACACCTTTAAGAGAACTGGATGGGTTATGGGTTCTATCATGCTCTTCTCAGTTGCCTTTCTTACCTACTACTGTATGATGCTTTTGGTCTATTCAAGGCGTAAGATTGAATCCCACATAAAAGCTGCAAAAATTTCATCTTTTGGTGATTTGGGGTTTGCTGTGTGTGGACCTGTTGGTAGATTGTCTGTTGATCTTATGATTATTCTATCTCAAGCTGGTTTTTGCGTTAGCTACTTGATTTTTGTGGCTAATACTTTGGCATATTTGTTCAATTATTCAATTGCAAAACCTGATCCCAAAATCTTGGGACTTTCACCCAAGGCAGCTTATATATGGGGCTGTTTCCCATTTCAGTTGGGATTGAATTCAATACCTACTCTGACCCTTTTAGCCCCTTTAAGTATTTTTGCTGATATTGCTGAATTAGGAGCTATGGGTGTGGTGATGGTTGAGGATGTGATGATTTACCTTCAGAACAGGCCTGTTCTTGAAATGTTTGGTGGGTTCAATGTGTTTTTCTATGGACTTGGTGTGGCTGTGTATGCTTTTGAAGGGATTGGTATGGTCTTACCTCTGGAATCAGAGACAAGAGACAAGGACAAGTTTGGGAAAATCTTGGGATTGGCAATGGGCTTCATATCATTG</genome_strand>
        <mrna_strand>CTTCTTGGCAAGATTCAACATCTTTCTTCTCCTTCCAAGACTTTTGCTAATGTTTTCATAGCCATAGTTGGAGCTGGAGTTCTTGGTCTTCCTTACACCTTTAAGAGAACTGGATGGGTTATGGGTTCTATCATGCTCTTCTCAGTTGCCTTTCTTACCTACTACTGTATGATGCTTTTGGTCTATTCAAGGCGTAAGATTGAATCCCACATAAAAGCTGCAAAAATTTCATCTTTTGGTGATTTGGGGTTTGCTGTGTGTGGACCTGTTGGTAGATTGTCTGTTGATCTTATGATTATTCTATCTCAAGCTGGTTTTTGCGTTAGCTACTTGATTTTTGTGGCTAATACTTTGGCATATTTGTTCAATTATTCAATTGCAAAACCTGATCCCAAAATCTTGGGACTTTCACCCAAGGCAGCTTATATATGGGGCTGTTTCCCATTTCAGTTGGGATTGAATTCAATACCTACTCTGACCCTTTTAGCCCCTTTAAGTATTTTTGCTGATATTGCTGAATTAGGAGCTATGGGTGTGGTGATGGTTGAGGATGTGATGATTTACCTTCAGAACAGGCCTGTTCTTGAAATGTTTGGTGGGTTCAATGTGTTTTTCTATGGACTTGGTGTGGCTGTGTATGCTTTTGAAGGGATTGGTATGGTCTTACCTCTGGAATCAGAGACAAGAGACAAGGACCAATTTGGGAAAATCTTGGGATTGGCAATGGGCTTCATATCATTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E704481" ref_strand="+" ref_description="SGN-E704481 [FA24BF10]">
      <seq>ttgattttgggataataagagtatggggtttaagaaagatgaagcaagttcatcttctcatgttttgagtatcccaagagaagatacaccacttcttggcaagattcaacatctttcttctccttccaagacttttgctaatgttttcatagccatagttggagctggagttcttggtcttccttacacctttaagagaactggatgggttatgggttctatcatgctcttctcagttgcctttcttacctactactgtatgatgcttttggtctattcaaggcgtaagattgaatcccacataaaagctgcaaaaatttcatcttttggtgatttggggtttgctgtgtgtggacctgttggtagattgtctgttgatcttatgattattctatctcaagctggtttttgcgttagctacttgatttttgtggctaatactttggcatatttgttcaattattcaattgcaaaacctgatcccaaaatcttgggactttcacccaaggcagcttatatatggggctgtttcccatttcagttgggattgaattcaatacctactctgacccttttagcccctttaagtatttttgctgatattgctgaattaggagctatgggtgtggtgatggttgaggatgtgatgatttaccttcagaacaggcctgttcttgaaatgtttggtgggttcaatgtgtttttctatggacttggtgtggctgtgtatgcttttgaagggattggtatggtcttacctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="-" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="66043" stop="64683"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="65743" g_stop="64983" g_length="761"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="761" r_length="761" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="-" ref_id="SGN-E704481" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>761</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E704481" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="65743" e_stop="64983"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGATTTTGGGATAATAAGAGTATGGGGTTTAAGAAAGATGAAGCAAGTTCATCTTCTCATGTTTTGAGTATCCCAAGAGAAGATACACCACTTCTTGGCAAGATTCAACATCTTTCTTCTCCTTCCAAGACTTTTGCTAATGTTTTCATAGCCATAGTTGGAGCTGGAGTTCTTGGTCTTCCTTACACCTTTAAGAGAACTGGATGGGTTATGGGTTCTATCATGCTCTTCTCAGTTGCCTTTCTTACCTACTACTGTATGATGCTTTTGGTCTATTCAAGGCGTAAGATTGAATCCCACATAAAAGCTGCAAAAATTTCATCTTTTGGTGATTTGGGGTTTGCTGTGTGTGGACCTGTTGGTAGATTGTCTGTTGATCTTATGATTATTCTATCTCAAGCTGGTTTTTGCGTTAGCTACTTGATTTTTGTGGCTAATACTTTGGCATATTTGTTCAATTATTCAATTGCAAAACCTGATCCCAAAATCTTGGGACTTTCACCCAAGGCAGCTTATATATGGGGCTGTTTCCCATTTCAGTTGGGATTGAATTCAATACCTACTCTGACCCTTTTAGCCCCTTTAAGTATTTTTGCTGATATTGCTGAATTAGGAGCTATGGGTGTGGTGATGGTTGAGGATGTGATGATTTACCTTCAGAACAGGCCTGTTCTTGAAATGTTTGGTGGGTTCAATGTGTTTTTCTATGGACTTGGTGTGGCTGTGTATGCTTTTGAAGGGATTGGTATGGTCTTACCTC</genome_strand>
        <mrna_strand>TTGATTTTGGGATAATAAGAGTATGGGGTTTAAGAAAGATGAAGCAAGTTCATCTTCTCATGTTTTGAGTATCCCAAGAGAAGATACACCACTTCTTGGCAAGATTCAACATCTTTCTTCTCCTTCCAAGACTTTTGCTAATGTTTTCATAGCCATAGTTGGAGCTGGAGTTCTTGGTCTTCCTTACACCTTTAAGAGAACTGGATGGGTTATGGGTTCTATCATGCTCTTCTCAGTTGCCTTTCTTACCTACTACTGTATGATGCTTTTGGTCTATTCAAGGCGTAAGATTGAATCCCACATAAAAGCTGCAAAAATTTCATCTTTTGGTGATTTGGGGTTTGCTGTGTGTGGACCTGTTGGTAGATTGTCTGTTGATCTTATGATTATTCTATCTCAAGCTGGTTTTTGCGTTAGCTACTTGATTTTTGTGGCTAATACTTTGGCATATTTGTTCAATTATTCAATTGCAAAACCTGATCCCAAAATCTTGGGACTTTCACCCAAGGCAGCTTATATATGGGGCTGTTTCCCATTTCAGTTGGGATTGAATTCAATACCTACTCTGACCCTTTTAGCCCCTTTAAGTATTTTTGCTGATATTGCTGAATTAGGAGCTATGGGTGTGGTGATGGTTGAGGATGTGATGATTTACCTTCAGAACAGGCCTGTTCTTGAAATGTTTGGTGGGTTCAATGTGTTTTTCTATGGACTTGGTGTGGCTGTGTATGCTTTTGAAGGGATTGGTATGGTCTTACCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E707458" ref_strand="+" ref_description="SGN-E707458 [FA33AC06]">
      <seq>caatattcaaaaagagcaagagaaaagattcaatcttgatttttttcttcttcttgttaatcaaatcttaaagttttgatttttaatatctggggtttgtgtagaagtttgattggattcttgattttgggataataagagtatggggtttaagaaagatgaagcaagttcatcttctcatgttttgagtatcccaagagaagatacaccacttcttggcaagattcaacatctttcttctccttccaagacttttgctaatgttttcatagccatagttggagctggagttcttggtcttccttacacctttaagagaactggatgggttatgggttctatcatgctcttctcagttgcctttcttacctactactgtatgatgcttttggtctattcaaggcgtaagattgaatcccacataaaagctgcaaaaatttcatcttttggtgatttggggtttgctgtgtgtggacctgttggtagattgtctgttgatcttatgattattctatctcaagctggtttttgcgttagctacttgatttttgtggctaatactttggcatatttgttcaattattcaattgcaaaacctgatcccaaaatcttgggactttcacccaaggcagcttatatatggggctgtttcccatttcagttgggattgaattcaatacctactctgacccttttagcccctttaagtatttttgctgatattgctgaattaggagctatgggtgtggtgatggttgaggatgtgatgatttaccttcagaacaggcctgttcttgaaatgtttggtgggttcaatgtgtttttctatggacttggtgtggctgtgtatgcttttgaagggattggtatggtc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="-" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="66162" stop="64690"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="65863" g_stop="64990" g_length="874"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="874" r_length="874" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="-" ref_id="SGN-E707458" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>874</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E707458" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="65863" e_stop="64990"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGATTCAAAAAGAGCAAGAGAAAAGATTCAATCTTGATTTTTTTCTTCTTCTTGTTAATCAAATCTTAAAGTTTTGATTTTTAATATCTGGGGTTTGTGTAGAAGTTTGATTGGATTCTTGATTTTGGGATAATAAGAGTATGGGGTTTAAGAAAGATGAAGCAAGTTCATCTTCTCATGTTTTGAGTATCCCAAGAGAAGATACACCACTTCTTGGCAAGATTCAACATCTTTCTTCTCCTTCCAAGACTTTTGCTAATGTTTTCATAGCCATAGTTGGAGCTGGAGTTCTTGGTCTTCCTTACACCTTTAAGAGAACTGGATGGGTTATGGGTTCTATCATGCTCTTCTCAGTTGCCTTTCTTACCTACTACTGTATGATGCTTTTGGTCTATTCAAGGCGTAAGATTGAATCCCACATAAAAGCTGCAAAAATTTCATCTTTTGGTGATTTGGGGTTTGCTGTGTGTGGACCTGTTGGTAGATTGTCTGTTGATCTTATGATTATTCTATCTCAAGCTGGTTTTTGCGTTAGCTACTTGATTTTTGTGGCTAATACTTTGGCATATTTGTTCAATTATTCAATTGCAAAACCTGATCCCAAAATCTTGGGACTTTCACCCAAGGCAGCTTATATATGGGGCTGTTTCCCATTTCAGTTGGGATTGAATTCAATACCTACTCTGACCCTTTTAGCCCCTTTAAGTATTTTTGCTGATATTGCTGAATTAGGAGCTATGGGTGTGGTGATGGTTGAGGATGTGATGATTTACCTTCAGAACAGGCCTGTTCTTGAAATGTTTGGTGGGTTCAATGTGTTTTTCTATGGACTTGGTGTGGCTGTGTATGCTTTTGAAGGGATTGGTATGGTC</genome_strand>
        <mrna_strand>CAATATTCAAAAAGAGCAAGAGAAAAGATTCAATCTTGATTTTTTTCTTCTTCTTGTTAATCAAATCTTAAAGTTTTGATTTTTAATATCTGGGGTTTGTGTAGAAGTTTGATTGGATTCTTGATTTTGGGATAATAAGAGTATGGGGTTTAAGAAAGATGAAGCAAGTTCATCTTCTCATGTTTTGAGTATCCCAAGAGAAGATACACCACTTCTTGGCAAGATTCAACATCTTTCTTCTCCTTCCAAGACTTTTGCTAATGTTTTCATAGCCATAGTTGGAGCTGGAGTTCTTGGTCTTCCTTACACCTTTAAGAGAACTGGATGGGTTATGGGTTCTATCATGCTCTTCTCAGTTGCCTTTCTTACCTACTACTGTATGATGCTTTTGGTCTATTCAAGGCGTAAGATTGAATCCCACATAAAAGCTGCAAAAATTTCATCTTTTGGTGATTTGGGGTTTGCTGTGTGTGGACCTGTTGGTAGATTGTCTGTTGATCTTATGATTATTCTATCTCAAGCTGGTTTTTGCGTTAGCTACTTGATTTTTGTGGCTAATACTTTGGCATATTTGTTCAATTATTCAATTGCAAAACCTGATCCCAAAATCTTGGGACTTTCACCCAAGGCAGCTTATATATGGGGCTGTTTCCCATTTCAGTTGGGATTGAATTCAATACCTACTCTGACCCTTTTAGCCCCTTTAAGTATTTTTGCTGATATTGCTGAATTAGGAGCTATGGGTGTGGTGATGGTTGAGGATGTGATGATTTACCTTCAGAACAGGCCTGTTCTTGAAATGTTTGGTGGGTTCAATGTGTTTTTCTATGGACTTGGTGTGGCTGTGTATGCTTTTGAAGGGATTGGTATGGTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E721744" ref_strand="+" ref_description="SGN-E721744 [FC15AE10]">
      <seq>gataccaaatataccttggtttccaagaagattcaaaaagagcaagagaaaagattcaatcttgatttttttcttcttcttgttaatcaaatcttaaagttttgatttttaatatctggggtttgtgtagaagtttgattggattcttgattttgggataataagagtatggggtttaagaaagatgaagcaagttcatcttctcatgttttgagtatcccaagagaagatacaccacttcttggcaagattcaacatctttcttctccttccaagacttttgctaatgttttcatagccatagttggagctggagttcttggtcttccttacacctttaagagaactggatgggttatgggttctatcatgctcttctcagttgcctttcttacctactactgtatgatgcttttggtctattcaaggcgtaagattgaatcccacataaaagctgcaaaaatttcatcttttggtgatttggggtttgctgtgtgtggacctgttggtagattgtctgttgatcttatgattattctatctcaagctggtttttgcgttagctacttgatttttgtggctaatactttggcatatttgttcaattattcaattgcaaaacctgatcccaaaatcttgggactttcacccaaggcagcttatatatggggctgtttcccatttcagttgggattgaattcaatacctactctgacccttttagcccctttaagtatttttgctgatattgctgaattaggagctatgggtgtggtgatggttgaggatgtgatgatttaccttcagaacaggcctgttcttgaaatgtttggtgggttcaatgtgtttttctatggacttggtgtggctgtgtatgcttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="-" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="66187" stop="64709"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="65888" g_stop="65009" g_length="880"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="881" r_length="881" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="-" ref_id="SGN-E721744" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>880</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E721744" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="65888" e_stop="65009"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATACCAAATATACCTT-GTTTCCAAGAAGATTCAAAAAGAGCAAGAGAAAAGATTCAATCTTGATTTTTTTCTTCTTCTTGTTAATCAAATCTTAAAGTTTTGATTTTTAATATCTGGGGTTTGTGTAGAAGTTTGATTGGATTCTTGATTTTGGGATAATAAGAGTATGGGGTTTAAGAAAGATGAAGCAAGTTCATCTTCTCATGTTTTGAGTATCCCAAGAGAAGATACACCACTTCTTGGCAAGATTCAACATCTTTCTTCTCCTTCCAAGACTTTTGCTAATGTTTTCATAGCCATAGTTGGAGCTGGAGTTCTTGGTCTTCCTTACACCTTTAAGAGAACTGGATGGGTTATGGGTTCTATCATGCTCTTCTCAGTTGCCTTTCTTACCTACTACTGTATGATGCTTTTGGTCTATTCAAGGCGTAAGATTGAATCCCACATAAAAGCTGCAAAAATTTCATCTTTTGGTGATTTGGGGTTTGCTGTGTGTGGACCTGTTGGTAGATTGTCTGTTGATCTTATGATTATTCTATCTCAAGCTGGTTTTTGCGTTAGCTACTTGATTTTTGTGGCTAATACTTTGGCATATTTGTTCAATTATTCAATTGCAAAACCTGATCCCAAAATCTTGGGACTTTCACCCAAGGCAGCTTATATATGGGGCTGTTTCCCATTTCAGTTGGGATTGAATTCAATACCTACTCTGACCCTTTTAGCCCCTTTAAGTATTTTTGCTGATATTGCTGAATTAGGAGCTATGGGTGTGGTGATGGTTGAGGATGTGATGATTTACCTTCAGAACAGGCCTGTTCTTGAAATGTTTGGTGGGTTCAATGTGTTTTTCTATGGACTTGGTGTGGCTGTGTATGCTTT</genome_strand>
        <mrna_strand>GATACCAAATATACCTTGGTTTCCAAGAAGATTCAAAAAGAGCAAGAGAAAAGATTCAATCTTGATTTTTTTCTTCTTCTTGTTAATCAAATCTTAAAGTTTTGATTTTTAATATCTGGGGTTTGTGTAGAAGTTTGATTGGATTCTTGATTTTGGGATAATAAGAGTATGGGGTTTAAGAAAGATGAAGCAAGTTCATCTTCTCATGTTTTGAGTATCCCAAGAGAAGATACACCACTTCTTGGCAAGATTCAACATCTTTCTTCTCCTTCCAAGACTTTTGCTAATGTTTTCATAGCCATAGTTGGAGCTGGAGTTCTTGGTCTTCCTTACACCTTTAAGAGAACTGGATGGGTTATGGGTTCTATCATGCTCTTCTCAGTTGCCTTTCTTACCTACTACTGTATGATGCTTTTGGTCTATTCAAGGCGTAAGATTGAATCCCACATAAAAGCTGCAAAAATTTCATCTTTTGGTGATTTGGGGTTTGCTGTGTGTGGACCTGTTGGTAGATTGTCTGTTGATCTTATGATTATTCTATCTCAAGCTGGTTTTTGCGTTAGCTACTTGATTTTTGTGGCTAATACTTTGGCATATTTGTTCAATTATTCAATTGCAAAACCTGATCCCAAAATCTTGGGACTTTCACCCAAGGCAGCTTATATATGGGGCTGTTTCCCATTTCAGTTGGGATTGAATTCAATACCTACTCTGACCCTTTTAGCCCCTTTAAGTATTTTTGCTGATATTGCTGAATTAGGAGCTATGGGTGTGGTGATGGTTGAGGATGTGATGATTTACCTTCAGAACAGGCCTGTTCTTGAAATGTTTGGTGGGTTCAATGTGTTTTTCTATGGACTTGGTGTGGCTGTGTATGCTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E343092" ref_strand="+" ref_description="SGN-E343092 [cTOF-11-J22]">
      <seq>aaaagagcaagagaaaagattcaatcttgatttttttcttcttcttgttaatcaaatcttaaagttttgatttttaatatctggggtttgtgtagaagtttgattggattcttgattttgggataataagagtatggggtttaagaaagatgaagcaagttcatcttctcatgttttgagtatcccaagagaagatacaccacttcttggcaagattcaacatctttcttctccttccaagacttttgctaatgttttcatagccatagttggagctggagttcttggtcttccttacacctttaagagaactggatgggttatgggttctatcatgctcttctcagttgcctttcttacctactactgtatgatgcttttggtctattcaaggcgtaagattgaatcccacataaaagctgcaaaaatttcatcttttggtgatttggggtttgctgtgtgtggacctgttggtagattgtctgttgatcttatgattattctatctcaagctggtttttgcgttagctacttgatttttgtggctaatactttggcatatttgttcaattattcaattgcaaaacctgatcccaaaatcttgggactttcacccaaggcagcttatatatggggctgtttcccatttcagttgggattgaattcaatacctactctgacccttttagcccctttaagtatttttgctgatattgctgaattaggagctatgggtgtggtgatggttgaagatgtgatgatttacct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="-" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="66154" stop="64787"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="65854" g_stop="65087" g_length="768"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="768" r_length="768" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="-" ref_id="SGN-E343092" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>768</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E343092" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="65854" e_stop="65087"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAGAGCAAGAGAAAAGATTCAATCTTGATTTTTTTCTTCTTCTTGTTAATCAAATCTTAAAGTTTTGATTTTTAATATCTGGGGTTTGTGTAGAAGTTTGATTGGATTCTTGATTTTGGGATAATAAGAGTATGGGGTTTAAGAAAGATGAAGCAAGTTCATCTTCTCATGTTTTGAGTATCCCAAGAGAAGATACACCACTTCTTGGCAAGATTCAACATCTTTCTTCTCCTTCCAAGACTTTTGCTAATGTTTTCATAGCCATAGTTGGAGCTGGAGTTCTTGGTCTTCCTTACACCTTTAAGAGAACTGGATGGGTTATGGGTTCTATCATGCTCTTCTCAGTTGCCTTTCTTACCTACTACTGTATGATGCTTTTGGTCTATTCAAGGCGTAAGATTGAATCCCACATAAAAGCTGCAAAAATTTCATCTTTTGGTGATTTGGGGTTTGCTGTGTGTGGACCTGTTGGTAGATTGTCTGTTGATCTTATGATTATTCTATCTCAAGCTGGTTTTTGCGTTAGCTACTTGATTTTTGTGGCTAATACTTTGGCATATTTGTTCAATTATTCAATTGCAAAACCTGATCCCAAAATCTTGGGACTTTCACCCAAGGCAGCTTATATATGGGGCTGTTTCCCATTTCAGTTGGGATTGAATTCAATACCTACTCTGACCCTTTTAGCCCCTTTAAGTATTTTTGCTGATATTGCTGAATTAGGAGCTATGGGTGTGGTGATGGTTGAGGATGTGATGATTTACCT</genome_strand>
        <mrna_strand>AAAAGAGCAAGAGAAAAGATTCAATCTTGATTTTTTTCTTCTTCTTGTTAATCAAATCTTAAAGTTTTGATTTTTAATATCTGGGGTTTGTGTAGAAGTTTGATTGGATTCTTGATTTTGGGATAATAAGAGTATGGGGTTTAAGAAAGATGAAGCAAGTTCATCTTCTCATGTTTTGAGTATCCCAAGAGAAGATACACCACTTCTTGGCAAGATTCAACATCTTTCTTCTCCTTCCAAGACTTTTGCTAATGTTTTCATAGCCATAGTTGGAGCTGGAGTTCTTGGTCTTCCTTACACCTTTAAGAGAACTGGATGGGTTATGGGTTCTATCATGCTCTTCTCAGTTGCCTTTCTTACCTACTACTGTATGATGCTTTTGGTCTATTCAAGGCGTAAGATTGAATCCCACATAAAAGCTGCAAAAATTTCATCTTTTGGTGATTTGGGGTTTGCTGTGTGTGGACCTGTTGGTAGATTGTCTGTTGATCTTATGATTATTCTATCTCAAGCTGGTTTTTGCGTTAGCTACTTGATTTTTGTGGCTAATACTTTGGCATATTTGTTCAATTATTCAATTGCAAAACCTGATCCCAAAATCTTGGGACTTTCACCCAAGGCAGCTTATATATGGGGCTGTTTCCCATTTCAGTTGGGATTGAATTCAATACCTACTCTGACCCTTTTAGCCCCTTTAAGTATTTTTGCTGATATTGCTGAATTAGGAGCTATGGGTGTGGTGATGGTTGAAGATGTGATGATTTACCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E203165" ref_strand="+" ref_description="SGN-E203165 [cLEB-3-F8](-)">
      <seq>caatgctaggacccagaagttcaaggctggaacaccaatggcggtgactatcaccgcattcaaggatgggactttcgatttcatcgttaagtctccgtcagtaacttggtacttaaagcaggccgctggaattgatctgggaagtggccgcccgggccatgtaacagcgtcgacgttaaccctaaagcacgtttatgaaattgcgaaaatcaagcagagtgaccctttttgccagtacatgcctttggagtcaatttgtaagtctattattgggacggcgaattctatggggattaaagttcagaaagagctggattgattgaatctgttgtgtgggtatttctgtatctttctctttttctttgtaagattttttgttggaaatgagagtgataaagttgtttaaagcaatgattttgttgtgtaaggaagcatgatatgttttagggatgttctcctagcaataaagataactttttttgaagttcaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="-" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="70529" stop="69432"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70229" g_stop="69722" g_length="508"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="508" r_length="508" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="-" ref_id="SGN-E203165" ref_strand="+">
        <total_alignment_score>0.980</total_alignment_score>
        <cumulative_length_of_scored_exons>508</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E203165" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70229" e_stop="69722"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAATGCTAGGACCCAGAAGTTCAAGGCTGGAACACCAATGGCGGTGACTATCACCGCATTCAAGGATGGGACTTTCGATTTCATCGTTAAGTCTCCGTCAGTAACTTGGTACTTAAAGCAGGCCGCTGGAATTGATCTGGGAAGTGGCCGCCCGGGCCATGTAACAGCGTCGACGTTAACCCTAAAGCACGTTTATGAAATTGCGAAAATCAAGCAGAGTGACCCTTTTTGCCAGTACATGCCTTTGGAGTCAATTTGTAAGTCTATTATTGGGACGGCGAATTCTATGGGGATTAAAGTTCAGAAAGAGCTGGATTGATTGAATCTGTTGTGTGGGTATTTCTGTATCTTTCTCTTTTTCTTTGTAAGATTTTTTGTTGGAAATGAGAGTGATAAAGTTGTTTAAAGCAATGATTTTGTTGTGTAAGGAAGCATGATATGTTTTAGGGATGTTCTCCTAGCAATAAAGATAACTTTTTTTGAAGTTCATTAGAGATATCCAAGCAAA</genome_strand>
        <mrna_strand>CAATGCTAGGACCCAGAAGTTCAAGGCTGGAACACCAATGGCGGTGACTATCACCGCATTCAAGGATGGGACTTTCGATTTCATCGTTAAGTCTCCGTCAGTAACTTGGTACTTAAAGCAGGCCGCTGGAATTGATCTGGGAAGTGGCCGCCCGGGCCATGTAACAGCGTCGACGTTAACCCTAAAGCACGTTTATGAAATTGCGAAAATCAAGCAGAGTGACCCTTTTTGCCAGTACATGCCTTTGGAGTCAATTTGTAAGTCTATTATTGGGACGGCGAATTCTATGGGGATTAAAGTTCAGAAAGAGCTGGATTGATTGAATCTGTTGTGTGGGTATTTCTGTATCTTTCTCTTTTTCTTTGTAAGATTTTTTGTTGGAAATGAGAGTGATAAAGTTGTTTAAAGCAATGATTTTGTTGTGTAAGGAAGCATGATATGTTTTAGGGATGTTCTCCTAGCAATAAAGATAACTTTTTTTGAAGTTCAAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E407399" ref_strand="+" ref_description="SGN-E407399 [PPI-6-P12]">
      <seq>gggactttcgatttcatcgttaagtctccgtcagtaacctggtacctaaagcaggccgctggaattgatctgggaagtggccgcccgggccatgtaacggcgtcgacgttaaccctaaagcacgtttatgaaattgcgaaaatcaagcagagtgaccctttttgccagtacatgcctttggagtcaatttgtaagtctattattgggacggcgaattctatggggattaaagttcagaaagagctggattgattgaaactgttgtgtgggtatttctgtatctttctctttttctttgtaatatttggaaatgagagtgataaagttgtttaaagcaatgattttgttgtgtaaggaagcatgatatgtgttagggatgttatcctagcaataaagatagctttttttgaagttaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="-" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="70462" stop="69432"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70162" g_stop="69726" g_length="437"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="431" r_length="431" r_score="0.945"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="-" ref_id="SGN-E407399" ref_strand="+">
        <total_alignment_score>0.945</total_alignment_score>
        <cumulative_length_of_scored_exons>437</cumulative_length_of_scored_exons>
        <coverage percentage="1.014" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E407399" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70162" e_stop="69726"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGGACTTTCGATTTCATCGTTAAGTCTCCGTCAGTAACTTGGTACTTAAAGCAGGCCGCTGGAATTGATCTGGGAAGTGGCCGCCCGGGCCATGTAACAGCGTCGACGTTAACCCTAAAGCACGTTTATGAAATTGCGAAAATCAAGCAGAGTGACCCTTTTTGCCAGTACATGCCTTTGGAGTCAATTTGTAAGTCTATTATTGGGACGGCGAATTCTATGGGGATTAAAGTTCAGAAAGAGCTGGATTGATTGAATCTGTTGTGTGGGTATTTCTGTATCTTTCTCTTTTTCTTTGTAAGATTTTTTGTTGGAAATGAGAGTGATAAAGTTGTTTAAAGCAATGATTTTGTTGTGTAAGGAAGCATGATATGTTTTAGGGATGTTCTCCTAGCAATAAAGATAACTTTTTTTGAAGTTCATTAGAGATATCCAAG</genome_strand>
        <mrna_strand>GGGACTTTCGATTTCATCGTTAAGTCTCCGTCAGTAACCTGGTACCTAAAGCAGGCCGCTGGAATTGATCTGGGAAGTGGCCGCCCGGGCCATGTAACGGCGTCGACGTTAACCCTAAAGCACGTTTATGAAATTGCGAAAATCAAGCAGAGTGACCCTTTTTGCCAGTACATGCCTTTGGAGTCAATTTGTAAGTCTATTATTGGGACGGCGAATTCTATGGGGATTAAAGTTCAGAAAGAGCTGGATTGATTGAAACTGTTGTGTGGGTATTTCTGTATCTTTCTCTTTTTCTTTGT-A-A---TAT-TTGGAAATGAGAGTGATAAAGTTGTTTAAAGCAATGATTTTGTTGTGTAAGGAAGCATGATATGTGTTAGGGATGTTATCCTAGCAATAAAGATAGCTTTTTTTGAAGTTAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E594590" ref_strand="+" ref_description="SGN-E594590 [37844]">
      <seq>aggatcttaaacgccgcctatctctgcacgatccgtctcaccgtcgatgcgggagcagctaagcccggagcaccagtagtccggccctcggtcagtacaagctgaactccatggcattctgtaaggacttcaacgctaggacccagaagttcaagctggaacaccaatggcggtgactatcaccgcattcaagatgggactttcgatttcatcgttaagtctccgtcagtaacttggtacctaaagcaggccgctggaattgatctgggaagtggcctgccgggccatgtaacggcgtcgcacgttaaccctaaagcacgtttatgaaattgcgaaaatcaagcagagtgaccctttttgccagtacatgcctttggagtcaatttgtaagtctattattgggacggcgaattctatggggattaaagttcagaaagagctggattgattgaaactgttgtgtgggtatttctgtatctttctctttttctttgtaagatttggaaatgagagtgataaagttgtttaaagcaatgattttgttgtgtaaggaagcatgatatgtgttagggatgttctcctacaataaagatagctttttttgagttaaaaaacaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="-" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="70664" stop="69432"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70364" g_stop="69728" g_length="637"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="622" r_length="622" r_score="0.940"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="-" ref_id="SGN-E594590" ref_strand="+">
        <total_alignment_score>0.940</total_alignment_score>
        <cumulative_length_of_scored_exons>637</cumulative_length_of_scored_exons>
        <coverage percentage="1.024" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E594590" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70364" e_stop="69728"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAGATCTTAACACGCCGCCCTATCTCAGCCACGATCCGTCTCACCGTCGATGCGGGAGCAGCTAAGCCCGGACCACCAGTAGGTCCGGCTCTCGGTCAGTACAAACTGAACTCCATGGCATTCTGTAAGGACTTCAATGCTAGGACCCAGAAGTTCAAGGCTGGAACACCAATGGCGGTGACTATCACCGCATTCAAGGATGGGACTTTCGATTTCATCGTTAAGTCTCCGTCAGTAACTTGGTACTTAAAGCAGGCCGCTGGAATTGATCTGGGAAGTGGCCGCCCGGGCCATGTAACAGCGTCG-ACGTTAACCCTAAAGCACGTTTATGAAATTGCGAAAATCAAGCAGAGTGACCCTTTTTGCCAGTACATGCCTTTGGAGTCAATTTGTAAGTCTATTATTGGGACGGCGAATTCTATGGGGATTAAAGTTCAGAAAGAGCTGGATTGATTGAATCTGTTGTGTGGGTATTTCTGTATCTTTCTCTTTTTCTTTGTAAGATTTTTTGTTGGAAATGAGAGTGATAAAGTTGTTTAAAGCAATGATTTTGTTGTGTAAGGAAGCATGATATGTTTTAGGGATGTTCTCCTAGCAATAAAGATAACTTTTTTTGAAGTTCATTAGAGATATCCA</genome_strand>
        <mrna_strand>AG-GATCTTAA-ACGCCG-CCTATCTCTG-CACGATCCGTCTCACCGTCGATGCGGGAGCAGCTAAGCCCGGAGCACCAGTA-GTCCGGCCCTCGGTCAGTACAAGCTGAACTCCATGGCATTCTGTAAGGACTTCAACGCTAGGACCCAGAAGTTCAA-GCTGGAACACCAATGGCGGTGACTATCACCGCATTCAA-GATGGGACTTTCGATTTCATCGTTAAGTCTCCGTCAGTAACTTGGTACCTAAAGCAGGCCGCTGGAATTGATCTGGGAAGTGGCCTGCCGGGCCATGTAACGGCGTCGCACGTTAACCCTAAAGCACGTTTATGAAATTGCGAAAATCAAGCAGAGTGACCCTTTTTGCCAGTACATGCCTTTGGAGTCAATTTGTAAGTCTATTATTGGGACGGCGAATTCTATGGGGATTAAAGTTCAGAAAGAGCTGGATTGATTGAAACTGTTGTGTGGGTATTTCTGTATCTTTCTCTTTTTCTTTGTAAGA-----T-TTGGAAATGAGAGTGATAAAGTTGTTTAAAGCAATGATTTTGTTGTGTAAGGAAGCATGATATGTGTTAGGGATGTTCTCCTA-CAATAAAGATAGCTTTTTTTG-AGTT-AAAAAACAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E203164" ref_strand="+" ref_description="SGN-E203164 [cLEB-3-F8]">
      <seq>gcacgagcgcttaaagagatcttaacacgccgccctatctcagccacgatccgtctcaccgtcgatgcgggagcagctaagcccggaccaccagtaggtccggctctcggtcagtacaaactgaactccatggcattctgtaaggacttcaatgctaggacccagaagttcaaggctggaacaccaatggcggtgactatcaccgcattcaaggatgggactttcgatttcatcgttaagtctccgtcagtaacttggtacttaaagcaggccgctggaattgatctgggaagtggccgcccgggccatgtaacagcgtcgacgttaaccctaaagcacgtttatgaaattgcgaaaatcaagcagagtgaccctttttgccagtacatgcctttggagtcaatttgtaagtctattattgggacggcgaattctatggggattaaagttcagaaagagctggattgattgaatctgttgtgtgggtatttctgtatctttctctttttctttgtaagattttttgttggaaatgagagtgataaagttgtttaaagcaaatgatttgttgtgtaaggaagcatgatatgttttagggatgttctcctagcaataaagataactttttttgaagttcaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="-" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="70673" stop="69432"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70380" g_stop="69732" g_length="649"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="647" r_length="647" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="-" ref_id="SGN-E203164" ref_strand="+">
        <total_alignment_score>0.980</total_alignment_score>
        <cumulative_length_of_scored_exons>649</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E203164" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70380" e_stop="69732"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCATGGCAACGCTTAAAGAGATCTTAACACGCCGCCCTATCTCAGCCACGATCCGTCTCACCGTCGATGCGGGAGCAGCTAAGCCCGGACCACCAGTAGGTCCGGCTCTCGGTCAGTACAAACTGAACTCCATGGCATTCTGTAAGGACTTCAATGCTAGGACCCAGAAGTTCAAGGCTGGAACACCAATGGCGGTGACTATCACCGCATTCAAGGATGGGACTTTCGATTTCATCGTTAAGTCTCCGTCAGTAACTTGGTACTTAAAGCAGGCCGCTGGAATTGATCTGGGAAGTGGCCGCCCGGGCCATGTAACAGCGTCGACGTTAACCCTAAAGCACGTTTATGAAATTGCGAAAATCAAGCAGAGTGACCCTTTTTGCCAGTACATGCCTTTGGAGTCAATTTGTAAGTCTATTATTGGGACGGCGAATTCTATGGGGATTAAAGTTCAGAAAGAGCTGGATTGATTGAATCTGTTGTGTGGGTATTTCTGTATCTTTCTCTTTTTCTTTGTAAGATTTTTTGTTGGAAATGAGAGTGATAAAGTTGTTTAAAGC-AATGATTTTGTTGTGTAAGGAAGCATGATATGTTTTAGGGATGTTCTCCTAGCAATAAAGATAACTTTTTTTGAAGTTCATTAGAGATA</genome_strand>
        <mrna_strand>GCA-CG-AGCGCTTAAAGAGATCTTAACACGCCGCCCTATCTCAGCCACGATCCGTCTCACCGTCGATGCGGGAGCAGCTAAGCCCGGACCACCAGTAGGTCCGGCTCTCGGTCAGTACAAACTGAACTCCATGGCATTCTGTAAGGACTTCAATGCTAGGACCCAGAAGTTCAAGGCTGGAACACCAATGGCGGTGACTATCACCGCATTCAAGGATGGGACTTTCGATTTCATCGTTAAGTCTCCGTCAGTAACTTGGTACTTAAAGCAGGCCGCTGGAATTGATCTGGGAAGTGGCCGCCCGGGCCATGTAACAGCGTCGACGTTAACCCTAAAGCACGTTTATGAAATTGCGAAAATCAAGCAGAGTGACCCTTTTTGCCAGTACATGCCTTTGGAGTCAATTTGTAAGTCTATTATTGGGACGGCGAATTCTATGGGGATTAAAGTTCAGAAAGAGCTGGATTGATTGAATCTGTTGTGTGGGTATTTCTGTATCTTTCTCTTTTTCTTTGTAAGATTTTTTGTTGGAAATGAGAGTGATAAAGTTGTTTAAAGCAAATGA-TTTGTTGTGTAAGGAAGCATGATATGTTTTAGGGATGTTCTCCTAGCAATAAAGATAACTTTTTTTGAAGTTCAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E619532" ref_strand="+" ref_description="SGN-E619532 [70223]">
      <seq>tgacgcttaaagagatcttaacacgccgccctatctctgccacgatccgtctcaccgtcgatgcgggagcagctaagcccggaccaccagtaggtccggccctcggtcagtacaagctgaactccatggcattctgtaaggacttcaacgctaggacccagaagttcaaggctggaacaccaatggcggtgactatcaccgcattcaaggatgggactttcgatttcatcgttaagtctccgtcagtaacctggtacctaaagcaggccgctggaattgatctgggaagtggccgcccgggccatgtaacggcgtcgacgttaaccctaaagcacgtttatgaaattgcgaaaatcaagcagagtgaccctttttgccagtacatgcctttggagtcaatttgtaagtctattattgggacggcgaattctatggggattaaagttcagaaagagctggattgattgaaactgttgtgtgggtatttctgtatctttcgctttttctttgtaatatttggaaatgagagtgataaagttgtttaaagcaatgattttgttgtgtaaggaagcatgatatgtgttagggatgttatcctagcaataaagatagctttttttgaagttcaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="-" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="70672" stop="69434"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70374" g_stop="69733" g_length="642"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="636" r_length="636" r_score="0.960"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="-" ref_id="SGN-E619532" ref_strand="+">
        <total_alignment_score>0.960</total_alignment_score>
        <cumulative_length_of_scored_exons>642</cumulative_length_of_scored_exons>
        <coverage percentage="1.009" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E619532" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70374" e_stop="69733"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAACGCTTAAAGAGATCTTAACACGCCGCCCTATCTCAGCCACGATCCGTCTCACCGTCGATGCGGGAGCAGCTAAGCCCGGACCACCAGTAGGTCCGGCTCTCGGTCAGTACAAACTGAACTCCATGGCATTCTGTAAGGACTTCAATGCTAGGACCCAGAAGTTCAAGGCTGGAACACCAATGGCGGTGACTATCACCGCATTCAAGGATGGGACTTTCGATTTCATCGTTAAGTCTCCGTCAGTAACTTGGTACTTAAAGCAGGCCGCTGGAATTGATCTGGGAAGTGGCCGCCCGGGCCATGTAACAGCGTCGACGTTAACCCTAAAGCACGTTTATGAAATTGCGAAAATCAAGCAGAGTGACCCTTTTTGCCAGTACATGCCTTTGGAGTCAATTTGTAAGTCTATTATTGGGACGGCGAATTCTATGGGGATTAAAGTTCAGAAAGAGCTGGATTGATTGAATCTGTTGTGTGGGTATTTCTGTATCTTTCTCTTTTTCTTTGTAAGATTTTTTGTTGGAAATGAGAGTGATAAAGTTGTTTAAAGCAATGATTTTGTTGTGTAAGGAAGCATGATATGTTTTAGGGATGTTCTCCTAGCAATAAAGATAACTTTTTTTGAAGTTCATTAGAGAT</genome_strand>
        <mrna_strand>TGACGCTTAAAGAGATCTTAACACGCCGCCCTATCTCTGCCACGATCCGTCTCACCGTCGATGCGGGAGCAGCTAAGCCCGGACCACCAGTAGGTCCGGCCCTCGGTCAGTACAAGCTGAACTCCATGGCATTCTGTAAGGACTTCAACGCTAGGACCCAGAAGTTCAAGGCTGGAACACCAATGGCGGTGACTATCACCGCATTCAAGGATGGGACTTTCGATTTCATCGTTAAGTCTCCGTCAGTAACCTGGTACCTAAAGCAGGCCGCTGGAATTGATCTGGGAAGTGGCCGCCCGGGCCATGTAACGGCGTCGACGTTAACCCTAAAGCACGTTTATGAAATTGCGAAAATCAAGCAGAGTGACCCTTTTTGCCAGTACATGCCTTTGGAGTCAATTTGTAAGTCTATTATTGGGACGGCGAATTCTATGGGGATTAAAGTTCAGAAAGAGCTGGATTGATTGAAACTGTTGTGTGGGTATTTCTGTATCTTTCGCTTTTTCTTTGT-A-A---TAT-TTGGAAATGAGAGTGATAAAGTTGTTTAAAGCAATGATTTTGTTGTGTAAGGAAGCATGATATGTGTTAGGGATGTTATCCTAGCAATAAAGATAGCTTTTTTTGAAGTTCAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E595105" ref_strand="+" ref_description="SGN-E595105 [38371]">
      <seq>ggccgctggaattgatctgggaagtggccgcccgggccatgtaacggcgtcgacgttaaccctaaagcacgtttatgaaattgcgaaaatcaagcagagtgaccctttttgccagtacatgcctttggagtcaatttgtaagtctattattgggacggcgaattctatggggattaaagttcagaaagagctggattgattgaaactgttgtgtgggtatttctgtatctttctctttttctttgtaagatttggaaatgagagtgataaagttgtttaaagcaatgatttcgttgtgtaaggaagcatgatatgtgttagggatgttctcctagcaataaagatagctttttttgaagttaacacaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="-" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="70409" stop="69441"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70109" g_stop="69735" g_length="375"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="369" r_length="369" r_score="0.955"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="-" ref_id="SGN-E595105" ref_strand="+">
        <total_alignment_score>0.955</total_alignment_score>
        <cumulative_length_of_scored_exons>375</cumulative_length_of_scored_exons>
        <coverage percentage="1.016" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E595105" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70109" e_stop="69735"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGCCGCTGGAATTGATCTGGGAAGTGGCCGCCCGGGCCATGTAACAGCGTCGACGTTAACCCTAAAGCACGTTTATGAAATTGCGAAAATCAAGCAGAGTGACCCTTTTTGCCAGTACATGCCTTTGGAGTCAATTTGTAAGTCTATTATTGGGACGGCGAATTCTATGGGGATTAAAGTTCAGAAAGAGCTGGATTGATTGAATCTGTTGTGTGGGTATTTCTGTATCTTTCTCTTTTTCTTTGTAAGATTTTTTGTTGGAAATGAGAGTGATAAAGTTGTTTAAAGCAATGATTTTGTTGTGTAAGGAAGCATGATATGTTTTAGGGATGTTCTCCTAGCAATAAAGATAACTTTTTTTGAAGTTCATTAGAG</genome_strand>
        <mrna_strand>GGCCGCTGGAATTGATCTGGGAAGTGGCCGCCCGGGCCATGTAACGGCGTCGACGTTAACCCTAAAGCACGTTTATGAAATTGCGAAAATCAAGCAGAGTGACCCTTTTTGCCAGTACATGCCTTTGGAGTCAATTTGTAAGTCTATTATTGGGACGGCGAATTCTATGGGGATTAAAGTTCAGAAAGAGCTGGATTGATTGAAACTGTTGTGTGGGTATTTCTGTATCTTTCTCTTTTTCTTTGTAAGA-----T-TTGGAAATGAGAGTGATAAAGTTGTTTAAAGCAATGATTTCGTTGTGTAAGGAAGCATGATATGTGTTAGGGATGTTCTCCTAGCAATAAAGATAGCTTTTTTTGAAGTTAACACAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E421191" ref_strand="-" ref_description="SGN-E421191 [STM-32-M22]">
      <seq>gggactttcgatttcatcgttaagtctccgtcagtaacctggtacctaaagcaggccgctggaattgatctgggaagtggccgcccgggccatgtaacggcgtcgacgttaaccctaaagcacgtttatgaaattgcgaaaatcaagcagagtgaccctttttgccagtacatgcctttggagtcaatttgtaagtctattattgggacggcgaattctatggggattaaagttcagaaagagctggattgattgaaactgttgtgtgggtatttctgtatctttctctttttctttgtaatatttggaaatgagagtgataaagttgtttaaagcaatgattttgttgtgtaaggaagcatgatatgtgttagggatgttatcctagcaataaagatagctttttttgaagttaaaaaaaaaaaaaaaaaaaaannnnctcgagggggggcccgtacccaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="-" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="70462" stop="69432"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70162" g_stop="69746" g_length="417"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="411" r_length="411" r_score="0.966"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="415" polyA_stop="436"/>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="-" ref_id="SGN-E421191" ref_strand="-">
        <total_alignment_score>0.966</total_alignment_score>
        <cumulative_length_of_scored_exons>417</cumulative_length_of_scored_exons>
        <coverage percentage="0.901" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E421191" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="70162" e_stop="69746"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGGACTTTCGATTTCATCGTTAAGTCTCCGTCAGTAACTTGGTACTTAAAGCAGGCCGCTGGAATTGATCTGGGAAGTGGCCGCCCGGGCCATGTAACAGCGTCGACGTTAACCCTAAAGCACGTTTATGAAATTGCGAAAATCAAGCAGAGTGACCCTTTTTGCCAGTACATGCCTTTGGAGTCAATTTGTAAGTCTATTATTGGGACGGCGAATTCTATGGGGATTAAAGTTCAGAAAGAGCTGGATTGATTGAATCTGTTGTGTGGGTATTTCTGTATCTTTCTCTTTTTCTTTGTAAGATTTTTTGTTGGAAATGAGAGTGATAAAGTTGTTTAAAGCAATGATTTTGTTGTGTAAGGAAGCATGATATGTTTTAGGGATGTTCTCCTAGCAATAAAGATAACTTTTTTTGAA</genome_strand>
        <mrna_strand>GGGACTTTCGATTTCATCGTTAAGTCTCCGTCAGTAACCTGGTACCTAAAGCAGGCCGCTGGAATTGATCTGGGAAGTGGCCGCCCGGGCCATGTAACGGCGTCGACGTTAACCCTAAAGCACGTTTATGAAATTGCGAAAATCAAGCAGAGTGACCCTTTTTGCCAGTACATGCCTTTGGAGTCAATTTGTAAGTCTATTATTGGGACGGCGAATTCTATGGGGATTAAAGTTCAGAAAGAGCTGGATTGATTGAAACTGTTGTGTGGGTATTTCTGTATCTTTCTCTTTTTCTTTGT-A-A---TAT-TTGGAAATGAGAGTGATAAAGTTGTTTAAAGCAATGATTTTGTTGTGTAAGGAAGCATGATATGTGTTAGGGATGTTATCCTAGCAATAAAGATAGCTTTTTTTGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E585730" ref_strand="+" ref_description="SGN-E585730 [68193]">
      <seq>ttcttcgccgtcacatttcaaccatggcgacgcttaaagagatcttaacacgccgccctatctctgccacgatccgtctcaccgtcgatgcgggagcagctaagcccggaccaccagtaggtccggccctcggtcagtacaagctgaactccatggcattctgtaaggacttcaacgctaggacccagaagttcaaggctggaacaccaatggcggtgactatcaccgcattcaaggatgggactttcgatttcatcgttaagtctccgtcagtaacttggtacctaaagcaggccgctggaattgatctgggaagtggccgcccgggccatgtaacggcgtcgacgttaaccctaaagcacgtttatgaaatttgcgaaaatcaagcagagtgaccctttttgccagtacatgcctttggagtcaatttgtaagtctattattgggacggcgaattctatggggattaaagttcagaaagagctggattgattgaaacttgtcgtgtgggtatttctgtatctttctctttatctttgtaagattgggaaatgagagtgataaagttgttaaaagg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="-" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="70700" stop="69558"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70401" g_stop="69821" g_length="581"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="577" r_length="577" r_score="0.959"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="-" ref_id="SGN-E585730" ref_strand="+">
        <total_alignment_score>0.959</total_alignment_score>
        <cumulative_length_of_scored_exons>581</cumulative_length_of_scored_exons>
        <coverage percentage="1.007" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E585730" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70401" e_stop="69821"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCTTCACCGTCACATTTCAACCATGGCAACGCTTAAAGAGATCTTAACACGCCGCCCTATCTCAGCCACGATCCGTCTCACCGTCGATGCGGGAGCAGCTAAGCCCGGACCACCAGTAGGTCCGGCTCTCGGTCAGTACAAACTGAACTCCATGGCATTCTGTAAGGACTTCAATGCTAGGACCCAGAAGTTCAAGGCTGGAACACCAATGGCGGTGACTATCACCGCATTCAAGGATGGGACTTTCGATTTCATCGTTAAGTCTCCGTCAGTAACTTGGTACTTAAAGCAGGCCGCTGGAATTGATCTGGGAAGTGGCCGCCCGGGCCATGTAACAGCGTCGACGTTAACCCTAAAGCACGTTTATGAAA-TTGCGAAAATCAAGCAGAGTGACCCTTTTTGCCAGTACATGCCTTTGGAGTCAATTTGTAAGTCTATTATTGGGACGGCGAATTCTATGGGGATTAAAGTTCAGAAAGAGCTGGATTGATTGAATC-TGTTGTGTGGGTATTTCTGTATCTTTCTCTTTTTCTTTGTAAGATTTTTTGTTGGAAATGAGAGTGATAAAGTTGTTTAAAGC</genome_strand>
        <mrna_strand>TTCTTCGCCGTCACATTTCAACCATGGCGACGCTTAAAGAGATCTTAACACGCCGCCCTATCTCTGCCACGATCCGTCTCACCGTCGATGCGGGAGCAGCTAAGCCCGGACCACCAGTAGGTCCGGCCCTCGGTCAGTACAAGCTGAACTCCATGGCATTCTGTAAGGACTTCAACGCTAGGACCCAGAAGTTCAAGGCTGGAACACCAATGGCGGTGACTATCACCGCATTCAAGGATGGGACTTTCGATTTCATCGTTAAGTCTCCGTCAGTAACTTGGTACCTAAAGCAGGCCGCTGGAATTGATCTGGGAAGTGGCCGCCCGGGCCATGTAACGGCGTCGACGTTAACCCTAAAGCACGTTTATGAAATTTGCGAAAATCAAGCAGAGTGACCCTTTTTGCCAGTACATGCCTTTGGAGTCAATTTGTAAGTCTATTATTGGGACGGCGAATTCTATGGGGATTAAAGTTCAGAAAGAGCTGGATTGATTGAAACTTGTCGTGTGGGTATTTCTGTATCTTTCTCTTTATCTTTGTAAGA----TTG--GGAAATGAGAGTGATAAAGTTGTTAAAAGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E278161" ref_strand="+" ref_description="SGN-E278161 [cLER-9-G5]">
      <seq>gccgccctatctcagccacgatccgtctcaccgtcgatgcgggagcagctaagcccggaccaccagtaggtccggctctcggtcagtacaaactgaactccatggcattctgtaaggacttcaatgctaggacccagaagttcaaggctggaacaccaatggcggtgactatcaccgcattcaaggatgggactttcgatttcatcgttaagtctccgtcagtaacttggtacttaaagcaggccgctggaattgatctgggaagtggcccgccgggccatgtaacagcgtcgacgttaaccctaaagcacgtttatgaaattgcggaaatcaagcagagtgaccctttttgccagtacatgcctttggagtcaatttgtaagtctattattgggacggcgaattctatggggattaaagttcagaaagagctggattgatttgaatctgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="-" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="70650" stop="69601"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70350" g_stop="69901" g_length="450"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="451" r_length="451" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="-" ref_id="SGN-E278161" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>450</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E278161" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70350" e_stop="69901"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCCGCCCTATCTCAGCCACGATCCGTCTCACCGTCGATGCGGGAGCAGCTAAGCCCGGACCACCAGTAGGTCCGGCTCTCGGTCAGTACAAACTGAACTCCATGGCATTCTGTAAGGACTTCAATGCTAGGACCCAGAAGTTCAAGGCTGGAACACCAATGGCGGTGACTATCACCGCATTCAAGGATGGGACTTTCGATTTCATCGTTAAGTCTCCGTCAGTAACTTGGTACTTAAAGCAGGCCGCTGGAATTGATCTGGGAAGTGGCCGCCCGGGCCATGTAACAGCGTCGACGTTAACCCTAAAGCACGTTTATGAAATTGCGAAAATCAAGCAGAGTGACCCTTTTTGCCAGTACATGCCTTTGGAGTCAATTTGTAAGTCTATTATTGGGACGGCGAATTCTATGGGGATTAAAGTTCAGAAAGAGCTGGATTGA-TTGAATCTGT</genome_strand>
        <mrna_strand>GCCGCCCTATCTCAGCCACGATCCGTCTCACCGTCGATGCGGGAGCAGCTAAGCCCGGACCACCAGTAGGTCCGGCTCTCGGTCAGTACAAACTGAACTCCATGGCATTCTGTAAGGACTTCAATGCTAGGACCCAGAAGTTCAAGGCTGGAACACCAATGGCGGTGACTATCACCGCATTCAAGGATGGGACTTTCGATTTCATCGTTAAGTCTCCGTCAGTAACTTGGTACTTAAAGCAGGCCGCTGGAATTGATCTGGGAAGTGGCCCGCCGGGCCATGTAACAGCGTCGACGTTAACCCTAAAGCACGTTTATGAAATTGCGGAAATCAAGCAGAGTGACCCTTTTTGCCAGTACATGCCTTTGGAGTCAATTTGTAAGTCTATTATTGGGACGGCGAATTCTATGGGGATTAAAGTTCAGAAAGAGCTGGATTGATTTGAATCTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E340998" ref_strand="+" ref_description="SGN-E340998 [cTOF-5-L17]">
      <seq>atttactcaaaataatctccttaattttattttagaggattcccatttcccatcaatggttaaaaaagctgtcaggaatgctttccagaaagccgataatacgttagcagatacaaagtctctagatagttcctctggaacaactgctctgattgcacttattttaggaaggaccatgctcatagctaatgctggggactctcgagctgtattagggaagcgtggaagagcaattgaattgtcaaaagaccacaaaccaaatgctacttccgagaaattaagaattgaaaaactagggggcgtcatttttgatggctacctcaatggccaactgtcagttgcacgagctctgggtgactggcacataaagagtgccaaaggttcaaagggcctgttgatctcggagccagagtttgaagaggtggtcctgtcagaagaggatgaattcctgataattggctgcgatggtttatgggatgtcatgagtagccaatatgcagtaacaatcgtaagaaaggagctcatgctgcataatgatcctgaaaaatgctcaaaatttcttgtcaaggaggcactgaagcgtaactgttgtgataatctaaccgttcttgtaatctgcttctctcatgatccaccacctcgaattgaaataccaaaaactacaagagggagaagtatatcagctgaaggacctggatctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="-" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="73223" stop="71183"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72923" g_stop="72753" g_length="171"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="171" r_length="171" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="72752" i_stop="72012" i_length="741">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="72011" g_stop="71483" g_length="529"/>
          <reference_exon_boundary r_type="cDNA" r_start="172" r_stop="701" r_length="530" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="-" ref_id="SGN-E340998" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>700</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E340998" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72923" e_stop="72753"/>
          <exon e_start="72011" e_stop="71483"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTACTCAAAATAATCTCCTTAATTTTATTTTAGAGGATTCCCATTTCCCATCAATGGTTAAAAAAGCTGTCAGGAATGCTTTCCAGAAAGCCGATAATACGTTAGCAGATACAAAGTCTCTAGATAGTTCCTCTGGAACAACTGCTCTGATTGCACTTATTTTAGGAAGGTAAGATATTGATCTGCTTTTGTGTGGTTCAGTCCTAAGTTCCAATTCTTCATGTCAGAAGGGGACAACAAATACTGAAACCATCACTGTCCCTAAACATTGTTTTATATTAATTTATGAATCTCTTGAAGTATTGTCTGTGTTTTATTCAAATAGTGGTAGAATTCCTTTGTATCAAAAAAATTGGAGAGGAACTGATGATAGGCATCGTTTCTCCTCATATTGAACTAAATGCTGCTCATGTCTATATGTAGCCAAAAGATCAATTCACAGTACTTGTTTGGTGTTGTTTGCTTCATTAGCTTTGTAAGGCAAATGTCGATGGCTCATGTTAGTCCAGTTTTACTTTTGGCATGTGAGTTTTGCAACTTTTCCAAGGAATTCTCCAAATTTTACTCTGTTTAGTATACAGATGACAAGGCTTTTATTTGATTCGAAAAGTGTATTTTAAACACATGCATAGGGTCCTTATGTTGTTCAAAGTTCATGTCCGAGTAGATTGGATTACTGGTTGGAAATGTGTAAGTCTATCCCGTAAAAATGGTCTTCCTACTGATTTTGGCCTTTATACTACATTCCATATGGCATATCTTTCCCATTTTTAGTTCTGATTTTCACTTATGAAGGCACATTTCTCCTTACATTGTTATTTGTTATATCAATATATAAATAGTATATGCACACTTCCTTTTTGAAATGGCAAAAAGTCATTTATATGTTGTATCTTGTTGTAATACACAGGACCATGCTCATAGCTAATGCTGGGGACTCTCGAGCTGTATTAGGGAAGCGTGGAAGAGCAATTGAATTGTCAAAAGACCACAAACCAAATGCTACTTCCGAGAAATTAAGAATTGAAAAACTAGGGGGCGTCATTTTTGATGGCTACCTCAATGGCCAACTGTCAGTTGCACGAGCTCTGGGTGACTGGCACATAAAGAGTGCCAAAGGTTCAAAGGGCCTGTTGATCTCGGAGCCAGAGTTTGAAGAGGTGGTCCTGTCAGAAGAGGATGAATTCCTGATAATTGGCTGCGATGGTTTATGGGATGTCATGAGTAGCCAATATGCAGTAACAATCGTAAGAAAGGAGCTCATGCTGCATAATGATCCTGAAAAATGCTCAAAATTTCTTGTCAAGGAGGCACTGAAGCGTAACTGTTGTGATAATCTAACCGTTCTTGTAATCTGCTTCTCTCATGATCCACCACCTCGAATTGAAATACCAAAAACTACAAGAAGGAGAAGTATATCAGCTGAAGGA-CTGGATCTT</genome_strand>
        <mrna_strand>ATTTACTCAAAATAATCTCCTTAATTTTATTTTAGAGGATTCCCATTTCCCATCAATGGTTAAAAAAGCTGTCAGGAATGCTTTCCAGAAAGCCGATAATACGTTAGCAGATACAAAGTCTCTAGATAGTTCCTCTGGAACAACTGCTCTGATTGCACTTATTTTAGGAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCATGCTCATAGCTAATGCTGGGGACTCTCGAGCTGTATTAGGGAAGCGTGGAAGAGCAATTGAATTGTCAAAAGACCACAAACCAAATGCTACTTCCGAGAAATTAAGAATTGAAAAACTAGGGGGCGTCATTTTTGATGGCTACCTCAATGGCCAACTGTCAGTTGCACGAGCTCTGGGTGACTGGCACATAAAGAGTGCCAAAGGTTCAAAGGGCCTGTTGATCTCGGAGCCAGAGTTTGAAGAGGTGGTCCTGTCAGAAGAGGATGAATTCCTGATAATTGGCTGCGATGGTTTATGGGATGTCATGAGTAGCCAATATGCAGTAACAATCGTAAGAAAGGAGCTCATGCTGCATAATGATCCTGAAAAATGCTCAAAATTTCTTGTCAAGGAGGCACTGAAGCGTAACTGTTGTGATAATCTAACCGTTCTTGTAATCTGCTTCTCTCATGATCCACCACCTCGAATTGAAATACCAAAAACTACAAGAGGGAGAAGTATATCAGCTGAAGGACCTGGATCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E359398" ref_strand="+" ref_description="SGN-E359398 [cLHT-31-I7]">
      <seq>ttctgcattggaaccaaatacagtaatgcttggtctcaaatcaccatcaagtgataattgtgcatatgtgcccatctttcgctcaggaagctattctgagatgggacccaaacagtacatggaagatgaacatatccgtattgataatctccgtgaacaagttgatgactccaaaggtcttctttcacaaggagcatattatggtgtgtttgatgggcacggtggcattgatgctgcatcatttactcaaaataatctccttaattttattttagaggattcccatttcccatcaatggttaaaaaagctgtcaggaatgctttccagaaagccgataatacgttagcagatacaaagtctctagatagttcctctggaacaactgctctgattgcacttattttaggaaggaccatgctcatagctaatgctggggactctcgagctgtattagggaagcgtggaagagcaattgaattgtcaaaagaccacaaaccaaatgctacttccgagaaattaagaattgaaaaactagggggcgtcatttttgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="-" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="73834" stop="71570"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="73528" g_stop="73334" g_length="195"/>
          <reference_exon_boundary r_type="cDNA" r_start="11" r_stop="205" r_length="195" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="73333" i_stop="72959" i_length="375">
            <donor d_prob="0.289" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="72958" g_stop="72753" g_length="206"/>
          <reference_exon_boundary r_type="cDNA" r_start="206" r_stop="411" r_length="206" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="72752" i_stop="72012" i_length="741">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="72011" g_stop="71870" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="412" r_stop="553" r_length="142" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="-" ref_id="SGN-E359398" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>543</cumulative_length_of_scored_exons>
        <coverage percentage="0.982" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E359398" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="73528" e_stop="73334"/>
          <exon e_start="72958" e_stop="72753"/>
          <exon e_start="72011" e_stop="71870"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAACCAAATACAGTAATGCTTGGTCTCAAATCACCATCAAGTGATAATTGTGCATATGTGCCCATCTTTCGCTCAGGAAGCTATTCTGAGATGGGACCCAAACAGTACATGGAAGATGAACATATCCGTATTGATAATCTCCGTGAACAAGTTGATGACTCCAAAGGTCTTCTTTCACAAGGAGCATATTATGGTGTATGTAGTTTCTTATTTGATTCAAACTATCAGTTTTTAAGGAGGCGGTGAAGTACTTCATACATTTGTTGAAAATTACATTATGTATGTGAAGTCAAAATATGCTTCTTGGCGGATACACACCTGATGTCACTGGTGCTTTTTGAATGTCTTGTATTGAATTCTACTCCTAGTCATAAAATTTAAACATTCTGTATTTTGATTAGAAAGCTGAAAATGAGCACTAGTATTTTTTTAAAAATAAGCCACATTATTTTGATTTCAATGATTGTTACCTAGTTATTGGTAGTTGCATGATATCAACTAGGATGCGCATAGTCGATTCCTTGGGTTTTGATGATATGACTCATCTGATTGTTGTTTTTGTACTCCCAGGTGTTTGATGGGCACGGTGGCATTGATGCTGCATCATTTACTCAAAATAATCTCCTTAATTTTATTTTAGAGGATTCCCATTTCCCATCAATGGTTAAAAAAGCTGTCAGGAATGCTTTCCAGAAAGCCGATAATACGTTAGCAGATACAAAGTCTCTAGATAGTTCCTCTGGAACAACTGCTCTGATTGCACTTATTTTAGGAAGGTAAGATATTGATCTGCTTTTGTGTGGTTCAGTCCTAAGTTCCAATTCTTCATGTCAGAAGGGGACAACAAATACTGAAACCATCACTGTCCCTAAACATTGTTTTATATTAATTTATGAATCTCTTGAAGTATTGTCTGTGTTTTATTCAAATAGTGGTAGAATTCCTTTGTATCAAAAAAATTGGAGAGGAACTGATGATAGGCATCGTTTCTCCTCATATTGAACTAAATGCTGCTCATGTCTATATGTAGCCAAAAGATCAATTCACAGTACTTGTTTGGTGTTGTTTGCTTCATTAGCTTTGTAAGGCAAATGTCGATGGCTCATGTTAGTCCAGTTTTACTTTTGGCATGTGAGTTTTGCAACTTTTCCAAGGAATTCTCCAAATTTTACTCTGTTTAGTATACAGATGACAAGGCTTTTATTTGATTCGAAAAGTGTATTTTAAACACATGCATAGGGTCCTTATGTTGTTCAAAGTTCATGTCCGAGTAGATTGGATTACTGGTTGGAAATGTGTAAGTCTATCCCGTAAAAATGGTCTTCCTACTGATTTTGGCCTTTATACTACATTCCATATGGCATATCTTTCCCATTTTTAGTTCTGATTTTCACTTATGAAGGCACATTTCTCCTTACATTGTTATTTGTTATATCAATATATAAATAGTATATGCACACTTCCTTTTTGAAATGGCAAAAAGTCATTTATATGTTGTATCTTGTTGTAATACACAGGACCATGCTCATAGCTAATGCTGGGGACTCTCGAGCTGTATTAGGGAAGCGTGGAAGAGCAATTGAATTGTCAAAAGACCACAAACCAAATGCTACTTCCGAGAAATTAAGAATTGAAAAACTAGGGGGCGTCATTTTTGAT</genome_strand>
        <mrna_strand>GAACCAAATACAGTAATGCTTGGTCTCAAATCACCATCAAGTGATAATTGTGCATATGTGCCCATCTTTCGCTCAGGAAGCTATTCTGAGATGGGACCCAAACAGTACATGGAAGATGAACATATCCGTATTGATAATCTCCGTGAACAAGTTGATGACTCCAAAGGTCTTCTTTCACAAGGAGCATATTATGGT.......................................................................................................................................................................................................................................................................................................................................................................................GTGTTTGATGGGCACGGTGGCATTGATGCTGCATCATTTACTCAAAATAATCTCCTTAATTTTATTTTAGAGGATTCCCATTTCCCATCAATGGTTAAAAAAGCTGTCAGGAATGCTTTCCAGAAAGCCGATAATACGTTAGCAGATACAAAGTCTCTAGATAGTTCCTCTGGAACAACTGCTCTGATTGCACTTATTTTAGGAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCATGCTCATAGCTAATGCTGGGGACTCTCGAGCTGTATTAGGGAAGCGTGGAAGAGCAATTGAATTGTCAAAAGACCACAAACCAAATGCTACTTCCGAGAAATTAAGAATTGAAAAACTAGGGGGCGTCATTTTTGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E577381" ref_strand="+" ref_description="SGN-E577381 [35222]">
      <seq>ataaagtttaaatcttggcatgtgggtgactttgcttctttctcaatttcaaagaagggtctgtcatactcattttctgcctaaaaatgtgggttcttgtggtgttactgacctgggatcaagaaacagtcacacagctgtccatgtgaagaaagaacatttaataattaaaccatgaaagcaaatgcacactattaagggatctattgatggagtgaatgaaagaaatgatggctccaggcaccaatatgtcaccctgtaatggggaaattgagaatgggttctgtaagggaaatatgtcagcaattgaagaaaatcaggaagtgtctgatggtttgagtcagccaaatgcagggaaaccaccaagaaaccatccagggatgaggcattgtatcagccaagcaagcttgggagctacttctgcattggaaccaaatacagtaatgcttggtctcaaatcaccatcaagtgacaattgtgcatatgtccccatctttcgctcaggaagctattctgagatgggacccaaacagtacatggaagatgaacatatccgtattgataatcgctccgggaacaagttgatgactccaaagggcttctttcacaaggagcatattatggtgtgtttgatgggcacggtggcattgatgctgcatcattcactcaaaataatctcctttaattttattttcgaggattcccatttcccat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="-" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="74985" stop="72571"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="74685" g_stop="74254" g_length="432"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="428" r_length="428" r_score="0.965"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="74253" i_stop="73529" i_length="725">
            <donor d_prob="0.953" d_score="0.96"/>
            <acceptor a_prob="0.985" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="73528" g_stop="73334" g_length="195"/>
          <reference_exon_boundary r_type="cDNA" r_start="429" r_stop="625" r_length="197" r_score="0.959"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="73333" i_stop="72959" i_length="375">
            <donor d_prob="0.289" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="72958" g_stop="72871" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="626" r_stop="714" r_length="89" r_score="0.955"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="-" ref_id="SGN-E577381" ref_strand="+">
        <total_alignment_score>0.962</total_alignment_score>
        <cumulative_length_of_scored_exons>715</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E577381" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="74685" e_stop="74254"/>
          <exon e_start="73528" e_stop="73334"/>
          <exon e_start="72958" e_stop="72871"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATAAAGTTTAAATCTTGGCATGTGGGTGACTTTGCTTCTTTGTCAATTTCAAAGAAGGGTCTGTAATACTCATTTTCTGCCTAAAAATGTGGGTTCTTGTGGTGTTTCTGACCTGGGATCAAGAAACAGTAACACAGCTGTCCATGTGAAGAAAGAAAAAAAATTTAATAATTAAACCATGAAAGCAAATGCACATTATTAAGGGATCTATTGATGGAGTGAATGAAAGAAATGATGGCTCCAGGCACCAATATGTCACCCTGTAATGGGGAAATTGAGAATGGGTTCTGTAAAGGAAATATGTCAGCAATTGAAGAAAATCAGGAAGTGTCTGATGGTTTGAGTCAACCAAATGCAGGGAAGCCACCAAGAAACCATCCAGGGATGAGGCATTGTATCAGCCAAGCAAATTTGGGAGCTACTTCTGCATTGGTGAGTGGATCCCAATTTGGAAATTTCCTTTTTTTACATGATAGTTTGGTCTTATGCTTGCAGAACCTGAAGTTGTTTAATTATGTTGAAAAGACCAAGTCTTCTGATTGCAATAGTATTATGATGTATGTTATGTACTAAAGTTATATCCTTTAGAAGGATCCTGTATCAATTGTTTGAGGGGTGATCTGTGAGGCTTGATCCTATTGTGGAAATGAACTATTTGAAAAGCAAAAAGAGGAAAACTGGATCGATATGCGCGGTGGTTCCTGTTGATTGTTTACTAGTGGCAATCCTAAATCCTAACTACTTGCTAATTAACAACAATGTCTGCTTTTAAATCCTTGTTCTGGTGTGTTGTTAGCAGTGGAAAGTAGATCCCGGTGCAGACATTGTTCTTCATTTCCGTATTGAATACCTTGATTTGCTCTAGTAAACCGTTACAAGATTTTCAAATATCTTCCGACTGTTTCCATCTTTTATGATTTTAATTCCATGATGATTATGCCAACAGTGGCTTTGTTGGTCCATAATGATTTATAAGCTATTGATGTACTTCCATTTATTGCGTTTCTCAAATTGCTTTTCATATATAAATTTGTGCACGATAACTGTTTCGCAAGCATATACAGTTGTATGTTGTTAGCTGGAGAGGCTTTTTATCTGTCAGTGTGTTTTTATTCTGCTTGCCAGTTGAAAGTTGTATTTGTCTTATAAATATGTAGGAACCAAATACAGTAATGCTTGGTCTCAAATCACCATCAAGTGATAATTGTGCATATGTGCCCATCTTTCGCTCAGGAAGCTATTCTGAGATGGGACCCAAACAGTACATGGAAGATGAACATATCCGTATTGATAAT--CTCCGTGAACAAGTTGATGACTCCAAAGGTCTTCTTTCACAAGGAGCATATTATGGTGTATGTAGTTTCTTATTTGATTCAAACTATCAGTTTTTAAGGAGGCGGTGAAGTACTTCATACATTTGTTGAAAATTACATTATGTATGTGAAGTCAAAATATGCTTCTTGGCGGATACACACCTGATGTCACTGGTGCTTTTTGAATGTCTTGTATTGAATTCTACTCCTAGTCATAAAATTTAAACATTCTGTATTTTGATTAGAAAGCTGAAAATGAGCACTAGTATTTTTTTAAAAATAAGCCACATTATTTTGATTTCAATGATTGTTACCTAGTTATTGGTAGTTGCATGATATCAACTAGGATGCGCATAGTCGATTCCTTGGGTTTTGATGATATGACTCATCTGATTGTTGTTTTTGTACTCCCAGGTGTTTGATGGGCACGGTGGCATTGATGCTGCATCATTTACTCAAAATAATCTCC-TTAATTTTATTTTAGAGGATTCCCATTTCCCAT</genome_strand>
        <mrna_strand>ATAAAGTTTAAATCTTGGCATGTGGGTGACTTTGCTTCTTTCTCAATTTCAAAGAAGGGTCTGTCATACTCATTTTCTGCCTAAAAATGTGGGTTCTTGTGGTGTTACTGACCTGGGATCAAGAAACAGTCACACAGCTGTCCATGTGAAGAAAG----AACATTTAATAATTAAACCATGAAAGCAAATGCACACTATTAAGGGATCTATTGATGGAGTGAATGAAAGAAATGATGGCTCCAGGCACCAATATGTCACCCTGTAATGGGGAAATTGAGAATGGGTTCTGTAAGGGAAATATGTCAGCAATTGAAGAAAATCAGGAAGTGTCTGATGGTTTGAGTCAGCCAAATGCAGGGAAACCACCAAGAAACCATCCAGGGATGAGGCATTGTATCAGCCAAGCAAGCTTGGGAGCTACTTCTGCATTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACCAAATACAGTAATGCTTGGTCTCAAATCACCATCAAGTGACAATTGTGCATATGTCCCCATCTTTCGCTCAGGAAGCTATTCTGAGATGGGACCCAAACAGTACATGGAAGATGAACATATCCGTATTGATAATCGCTCCGGGAACAAGTTGATGACTCCAAAGGGCTTCTTTCACAAGGAGCATATTATGGT.......................................................................................................................................................................................................................................................................................................................................................................................GTGTTTGATGGGCACGGTGGCATTGATGCTGCATCATTCACTCAAAATAATCTCCTTTAATTTTATTTTCGAGGATTCCCATTTCCCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E560446" ref_strand="+" ref_description="SGN-E560446 [20102]">
      <seq>cctaatcacagcaggagtttatgatgcagccataggtagacatagcaattacaactaatcgaacaaaaatggttgatttcactcaaccgtacattgaatctgggttagttgtagtggcaccagttaaggagcagaattctaatgcttgggcttttctcagtccatttactcctaggatgtggtgtgtcactggtgtttttttcttaattgtgggcactgtaatttggattttggaacacagattgaatgatgattttcgtggacctccgagtaaacagattgtcactgttttatggttcagtttttcaactctctttactgcccagagagaaaacactgtcagcacctttggccgtattgtccttcttatatggctatttgtggttttgataataaactcaagctatacggccagtctcacctcaattcttacagtgcagaaactttcttccccaattaccggaattgaaagtttagtaaatacaaaggaacccattggttatcagttgggttcatttgcccgtaactatctgattcaagaacttcgcattgatgaatctagacttgttcctcttaacctccctgaagattatgctaaagctttaaaagatggtcctagccgtggtggtgttgcagcagtggtagatgagcgtgcatatatggagcttttcctctcatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="+" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="80159" stop="81681"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="80361" g_stop="80376" g_length="16"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="16" r_length="16" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="80377" i_stop="80461" i_length="85">
            <donor d_prob="0.984" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="80462" g_stop="80739" g_length="278"/>
          <reference_exon_boundary r_type="cDNA" r_start="17" r_stop="295" r_length="279" r_score="0.978"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="80740" i_stop="80912" i_length="173">
            <donor d_prob="0.989" d_score="0.98"/>
            <acceptor a_prob="0.988" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80913" g_stop="80944" g_length="32"/>
          <reference_exon_boundary r_type="cDNA" r_start="296" r_stop="327" r_length="32" r_score="0.969"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="80945" i_stop="81029" i_length="85">
            <donor d_prob="0.961" d_score="0.00"/>
            <acceptor a_prob="0.958" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="81030" g_stop="81381" g_length="352"/>
          <reference_exon_boundary r_type="cDNA" r_start="328" r_stop="679" r_length="352" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="+" ref_id="SGN-E560446" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>678</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E560446" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="80361" e_stop="80376"/>
          <exon e_start="80462" e_stop="80739"/>
          <exon e_start="80913" e_stop="80944"/>
          <exon e_start="81030" e_stop="81381"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTAATCACAGCAGGAGTGAGTATAAGACTACCAAGGTTCTACTGTACTGTCATTTGAACAATGTGCTTTCTAACTGTATCCACTTGACCTTTTATTTCAGGTTTATGATGCAGCCATAGGT-GACATAGCAATTACAACTAATCGAACAAAAATGGTTGACTTCACTCAACCATACATTGAATCTGGGTTAGTTGTAGTGGCACCAGTTAAGGAGCAGAATTCTAATGCTTGGGCTTTTCTCAGTCCATTTACTCCTAAGATGTGGTGTGTCACTGGTGTTTTTTTCTTAATTGTGGGCACTGTAATTTGGATTTTGGAACACAGATTGAATGATGAATTTCGTGGACCTCCGAGTAAACAGATTGTCACTGTTTTATGGTGAGTTGGCAAAACATAACTACTAAATTAGAATATATTTACCTGATGAAAGAGTGTGTCATATTTGTTCGCTCTTTCTTGACTATCTCCCACACTTTCTAGTTTCCACTTGCCAAATTCACTTTGTAGAATATCAAACTCTTGACCCTTTCCTATGTAAAACTCTTTTGCAGGTTCAGCTTTTCAACTCTCTTTACTGCCCAGAGTAAGTAACCTATGCTGGTTGAGTTACTTCTGTACTAACATTTGAATGAGCTTCTATAACAAAAAAAAAACACTTTTATATGCAGGAGAAAACACTGTCAGCACCTTTGGCCGTATTGTCCTTCTTATATGGCTATTTGTGGTTTTGATAATAAACTCAAGCTATACTGCCAGTCTCACCTCAATTCTTACAGTGCAGAAACTTTCTTCCCCAATTACCGGAATTGAAAGTTTAGTAAATACAAAGGAACCCATTGGTTATCAGTGGGGTTCATTTGCCCGTAACTATCTGATTCAAGAACTTCGCATTGATGAATCTAGACTTGTTCCTCTTAACCTCCCTGAAGATTATGCTAAAGCTTTAAAAGATGGTCCTAGCCGTGGTGGTGTTGCAGCAGTGGTAGATGAGCGTGCTTATATGGAGCTTTTCCTCTCATC</genome_strand>
        <mrna_strand>CCTAATCACAGCAGGA.....................................................................................GTTTATGATGCAGCCATAGGTAGACATAGCAATTACAACTAATCGAACAAAAATGGTTGATTTCACTCAACCGTACATTGAATCTGGGTTAGTTGTAGTGGCACCAGTTAAGGAGCAGAATTCTAATGCTTGGGCTTTTCTCAGTCCATTTACTCCTAGGATGTGGTGTGTCACTGGTGTTTTTTTCTTAATTGTGGGCACTGTAATTTGGATTTTGGAACACAGATTGAATGATGATTTTCGTGGACCTCCGAGTAAACAGATTGTCACTGTTTTATG.............................................................................................................................................................................GTTCAGTTTTTCAACTCTCTTTACTGCCCAGA.....................................................................................GAGAAAACACTGTCAGCACCTTTGGCCGTATTGTCCTTCTTATATGGCTATTTGTGGTTTTGATAATAAACTCAAGCTATACGGCCAGTCTCACCTCAATTCTTACAGTGCAGAAACTTTCTTCCCCAATTACCGGAATTGAAAGTTTAGTAAATACAAAGGAACCCATTGGTTATCAGTTGGGTTCATTTGCCCGTAACTATCTGATTCAAGAACTTCGCATTGATGAATCTAGACTTGTTCCTCTTAACCTCCCTGAAGATTATGCTAAAGCTTTAAAAGATGGTCCTAGCCGTGGTGGTGTTGCAGCAGTGGTAGATGAGCGTGCATATATGGAGCTTTTCCTCTCATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E431776" ref_strand="-" ref_description="SGN-E431776 [STM-56-C3]">
      <seq>tttctcgtttgttagatcccaatgctgaactgagaccaaaaggcagtgaaggtgcttgctcatcctttcttttggactgctgagatgcgactgtcatttcttcgtgactcaagcgacagggtggaacttgaagatagggagacttcttctgatcttctgaaagcattagaaggtacagcgcctgtggctttgggtggaaaatgggatgagaagatggagcctcctttcataaaaaatattggccattacaggcgatatagatttgacagtattcgtgatttgctgcgtgtgatgcggaacaagctaaatcattatagagagcttcccaccgaaattcaggaaattttaggaactgttccagaaggatttgatggctattttaggaggcggtttccacaactactaattgaagtgtataaagtgatgtcagaatactgtaaagatgaggcctgttttcagaagtacttcacaagcagtgtactttaggctcctccagatagcagctgtatcttgttccgttcttacattatatgcatgatgtaacatgtattgtatattgtaatctacaccatgtaaatatgcctgtgccgggcaggtaccagaaagctgtacggacaccactgttgttggaaacaaaaataatgtaaatatgaaatcaaattgtgaatattatttaagtatgttactaaaaaaagttgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="-" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="85201" stop="82617"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="84901" g_stop="84868" g_length="34"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="34" r_length="34" r_score="0.971"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="84867" i_stop="83788" i_length="1080">
            <donor d_prob="0.997" d_score="0.00"/>
            <acceptor a_prob="0.661" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="83787" g_stop="83484" g_length="304"/>
          <reference_exon_boundary r_type="cDNA" r_start="35" r_stop="339" r_length="305" r_score="0.987"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="83483" i_stop="83272" i_length="212">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.967" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="83271" g_stop="82912" g_length="360"/>
          <reference_exon_boundary r_type="cDNA" r_start="340" r_stop="696" r_length="357" r_score="0.903"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="-" ref_id="SGN-E431776" ref_strand="-">
        <total_alignment_score>0.941</total_alignment_score>
        <cumulative_length_of_scored_exons>698</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E431776" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="84901" e_stop="84868"/>
          <exon e_start="83787" e_stop="83484"/>
          <exon e_start="83271" e_stop="82912"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCTCGTTTGTTAGATCCCATTGCTGAACTGAGGTAAGAAGTGCACATGTTTTATATAATGAAAATTTTATTACATCCCGCACATACCAATAACTATTGACAAATTTAGAGTTCTTTATTGACCATGACATCCTTGTAGCTAGTTATGGCTGGAACTTCTCTTCGAATTGCAATACTGTTTTCATACTCTAAAAATGTTTGTGACAAAAAGAAACGAAGTGACTTAGCTTACGACCACTGAACAAACTTGGTTGACGAACATAGTTTATGCGCCGCTAATGTAGCGGCTAGTTCTTTATTGACCATGACATCCTTGTAGCTAGTTATGGCTGGAACTTCTCTTTGAATTGCAATACTGTTTTCATACTCTAAAAATGTTTGTGAAGATGACTATACCCTTTTTATCTCCCTTTAAAATTAAAGCTCCTGCATGGTGATTTTCAAAGTACAAAGAATATTTTTTGTATATTCAGTGAAGAAGGTAGGAATGATGATTATGACTATTAGCATGTGTACAATCAAGTTTTAGCTCAACTAATGTTTCAGCTGTATTTAGTTTAGTAATGTGCTTGATAAGTTTCAGACCCATTCAACGTATTAAGTAGGCTGTGCAGTTATTTCTTCACTGCTGTTCAGGAATGCAAGAAACATCTCTGTATCAGTATTACCTATTTTATTTCTTTAGATCTTAAAAAATGACTGCGTATAAAAAGATTCTTAGAAAATCCAGTACTAGCTAGGGGCTAGAGTCAGAGTCGTAATTTTGCATACTTGAGGTGCAAGGCTTGATCCTCACAATAGACCCATAGGCATCCCTTTCCCCACCCTGACCACCATTATCCCTGTCAAGAAATAGTAATTTTTGAAAAAAAAAGGAAAGAAAAAACAGACAATGTAAGAAAAATAAAGAAAATTAGAGGTTTTTTCTTCATGAATTGGTAGCTATCTTAGCACATTGAGGTGTAGCTGTATTTTCAATTAATATAACATTAACATTGTAATGGGAAAACTCCTAAACCGTTCTCTTGGATAAAGTGCATGTCCTGCTAGTCTATGTACACTGTGCCTGCCTATTGCTAAATCCTCTTTTTTTTCCTTTAAATTCTGTCAAAGACC-AAAGGCAGTGAAGGTGCTTGCTCATCCTTTCTTTTGGACTGCTGAGATGCGACTGTCATTTCTTCGTGATTCAAGCGACAGGGTGGAACTTGAAGATAGGGAGACTTCTTCTGATCTTCTGAAAGCATTAGAAGGTACAGCGCCTGTGGCTTTGGGTGGAAAATGGGATGAGAAGATGGAACCTCCTTTCATAAAAAATATTGGCCATTACAGGCGATATAGATTTGACAGTATTCGTGATTTGCTGCGTGTGATGCGGAACAAGCTAAATCATTATAGAGAGCTTCCCACCGAAATTCAGGTTAGTTTTGATCAACTTATATAGTACTTTACTACTTAATACGTATTGCTATTCAACAAATTGGTGCACTTAACATTTGGTCAAGACTTCCTTTGAGGAATTAGTTTTTGTGTGGGAACATCTCGAAGAACCAGTGTGCTGTAAGGTGGAAATATTATCGATGATTTCAGATTGTATTTGCTGACTTCCGGTGTATCTTCACTTCATTTCAGGAAATTATAGGAACCGTTCCAGAAGGATTTGATGGCTATTTTAGGAGGCGGTTTCCGCGGCTACTAATTGAAGTGTATAAAGTGATGTCAGAATACTGTAAAGATGAAGCCTGTTTTCAGAAGTACTTCACAAGCAGTGTACTTTAGGCTCCTCCAGATAGTAGCTTAATCTTGTTCCATTCTTACATTACATGTATGATGTAACATGTATTGTAAATTGTAATATACACTATGTAAATATGCCTGTGCCGGGGAGGTACCAGAAAGCTGTCCGAATACACCACTGTTGTTGGAAACAAAAATAATGTATATATGAAACCAAATGTGTAATCTTATTAAAGTATGTTTACCAACATTTCT</genome_strand>
        <mrna_strand>TTTCTCGTTTGTTAGATCCCAATGCTGAACTGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAAAAGGCAGTGAAGGTGCTTGCTCATCCTTTCTTTTGGACTGCTGAGATGCGACTGTCATTTCTTCGTGACTCAAGCGACAGGGTGGAACTTGAAGATAGGGAGACTTCTTCTGATCTTCTGAAAGCATTAGAAGGTACAGCGCCTGTGGCTTTGGGTGGAAAATGGGATGAGAAGATGGAGCCTCCTTTCATAAAAAATATTGGCCATTACAGGCGATATAGATTTGACAGTATTCGTGATTTGCTGCGTGTGATGCGGAACAAGCTAAATCATTATAGAGAGCTTCCCACCGAAATTCAG....................................................................................................................................................................................................................GAAATTTTAGGAACTGTTCCAGAAGGATTTGATGGCTATTTTAGGAGGCGGTTTCCACAACTACTAATTGAAGTGTATAAAGTGATGTCAGAATACTGTAAAGATGAGGCCTGTTTTCAGAAGTACTTCACAAGCAGTGTACTTTAGGCTCCTCCAGATAGCAGCTGTATCTTGTTCCGTTCTTACATTATATGCATGATGTAACATGTATTGTATATTGTAATCTACACCATGTAAATATGCCTGTGCCGGGCAGGTACCAGAAAGCTGTACG--GACACCACTGTTGTTGGAAACAAAAATAATGTAAATATGAAATCAAATTGTGAATATTATTTAAGTATG-TTACTAAAAAAAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E458873" ref_strand="+" ref_description="SGN-E458873 [cPRO-32-L23]">
      <seq>attcaacaaattggtggacttaacatttggtcaagacttcctttgaggaattagtttttgtgtgggaacatctcaaagaagcagtgtgctgcaaggtggaaatattatcgttgatttcagattgtatttcctgacttccggtgcatctcaacttcatttcaggaaattttaggaactgttccagaaggatttgatggctattttaggaggcggtttccacagctactaattgaagtgtataaagtgatgtcagaatactgtaaagatgaggcctgttttcagaagtacttcacaagcagtgtactttaggctcctccagatagcagctgaatcttgttccattctcacattatatgtatgatgtaacatgtattgtatattgtaatctacaccatgtaaatatgcctgttccggggaggtaccagagaactgtacggacaccactgttgttggaaacaaaaacaatgtaaatatgaaatcaaattgtgtaatcttattacagtatgtttaccaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="-" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="83733" stop="82617"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="83433" g_stop="82918" g_length="516"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="515" r_length="515" r_score="0.932"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="516" polyA_stop="525"/>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="-" ref_id="SGN-E458873" ref_strand="+">
        <total_alignment_score>0.932</total_alignment_score>
        <cumulative_length_of_scored_exons>516</cumulative_length_of_scored_exons>
        <coverage percentage="0.983" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E458873" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="83433" e_stop="82918"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTCAACAAATTGGTGCACTTAACATTTGGTCAAGACTTCCTTTGAGGAATTAGTTTTTGTGTGGGAACATCTCGAAGAACCAGTGTGCTGTAAGGTGGAAATATTATCGATGATTTCAGATTGTATTTGCTGACTTCCGGTGTATCTTCACTTCATTTCAGGAAATTATAGGAACCGTTCCAGAAGGATTTGATGGCTATTTTAGGAGGCGGTTTCCGCGGCTACTAATTGAAGTGTATAAAGTGATGTCAGAATACTGTAAAGATGAAGCCTGTTTTCAGAAGTACTTCACAAGCAGTGTACTTTAGGCTCCTCCAGATAGTAGCTTAATCTTGTTCCATTCTTACATTACATGTATGATGTAACATGTATTGTAAATTGTAATATACACTATGTAAATATGCCTGTGCCGGGGAGGTACCAGAAAGCTGTCCGAATACACCACTGTTGTTGGAAACAAAAATAATGTATATATGAAACCAAA-TGTGTAATCTTATTAAAGTATGTTTACCAAC</genome_strand>
        <mrna_strand>ATTCAACAAATTGGTGGACTTAACATTTGGTCAAGACTTCCTTTGAGGAATTAGTTTTTGTGTGGGAACATCTCAAAGAAGCAGTGTGCTGCAAGGTGGAAATATTATCGTTGATTTCAGATTGTATTTCCTGACTTCCGGTGCATCTCAACTTCATTTCAGGAAATTTTAGGAACTGTTCCAGAAGGATTTGATGGCTATTTTAGGAGGCGGTTTCCACAGCTACTAATTGAAGTGTATAAAGTGATGTCAGAATACTGTAAAGATGAGGCCTGTTTTCAGAAGTACTTCACAAGCAGTGTACTTTAGGCTCCTCCAGATAGCAGCTGAATCTTGTTCCATTCTCACATTATATGTATGATGTAACATGTATTGTATATTGTAATCTACACCATGTAAATATGCCTGTTCCGGGGAGGTACCAGAGAACTGTACG--GACACCACTGTTGTTGGAAACAAAAACAATGTAAATATGAAATCAAATTGTGTAATCTTATTACAGTATGTTTACCAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E462287" ref_strand="+" ref_description="SGN-E462287 [cPRO-11-O19]">
      <seq>attcaacaaattggtggacttaacatttggtcaagacttcctttgaggaattagtttttgtgtgggaacatctcaaagaagcagtgtgctgcaaggtggaaatattatcgttgatttcagattgtatttcctgacttccggtgcatctcaacttcatttcaggaaattttaggaactgttccagaaggatttgatggctattttaggaggcggtttccacagctactaattgaagtgtataaagtgatgtcagaatactgtaaagatgaggcctgttttcagaagtacttcacaagcagtgtactttaggctcctccagatagcagctgaatcttgttccattctcacattatatgtatgatgtaacatgtattgtatattgtaatctacaccatgtaaatatgcctgttccggggaggtaccagagaactgtacggacaccactgttgttggaaacaaaaacaatgtaaatatgaaatcaaattgtgtaatcttattacagtatgtttaccaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="-" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="83733" stop="82617"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="83433" g_stop="82918" g_length="516"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="515" r_length="515" r_score="0.932"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="516" polyA_stop="525"/>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="-" ref_id="SGN-E462287" ref_strand="+">
        <total_alignment_score>0.932</total_alignment_score>
        <cumulative_length_of_scored_exons>516</cumulative_length_of_scored_exons>
        <coverage percentage="0.983" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E462287" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="83433" e_stop="82918"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTCAACAAATTGGTGCACTTAACATTTGGTCAAGACTTCCTTTGAGGAATTAGTTTTTGTGTGGGAACATCTCGAAGAACCAGTGTGCTGTAAGGTGGAAATATTATCGATGATTTCAGATTGTATTTGCTGACTTCCGGTGTATCTTCACTTCATTTCAGGAAATTATAGGAACCGTTCCAGAAGGATTTGATGGCTATTTTAGGAGGCGGTTTCCGCGGCTACTAATTGAAGTGTATAAAGTGATGTCAGAATACTGTAAAGATGAAGCCTGTTTTCAGAAGTACTTCACAAGCAGTGTACTTTAGGCTCCTCCAGATAGTAGCTTAATCTTGTTCCATTCTTACATTACATGTATGATGTAACATGTATTGTAAATTGTAATATACACTATGTAAATATGCCTGTGCCGGGGAGGTACCAGAAAGCTGTCCGAATACACCACTGTTGTTGGAAACAAAAATAATGTATATATGAAACCAAA-TGTGTAATCTTATTAAAGTATGTTTACCAAC</genome_strand>
        <mrna_strand>ATTCAACAAATTGGTGGACTTAACATTTGGTCAAGACTTCCTTTGAGGAATTAGTTTTTGTGTGGGAACATCTCAAAGAAGCAGTGTGCTGCAAGGTGGAAATATTATCGTTGATTTCAGATTGTATTTCCTGACTTCCGGTGCATCTCAACTTCATTTCAGGAAATTTTAGGAACTGTTCCAGAAGGATTTGATGGCTATTTTAGGAGGCGGTTTCCACAGCTACTAATTGAAGTGTATAAAGTGATGTCAGAATACTGTAAAGATGAGGCCTGTTTTCAGAAGTACTTCACAAGCAGTGTACTTTAGGCTCCTCCAGATAGCAGCTGAATCTTGTTCCATTCTCACATTATATGTATGATGTAACATGTATTGTATATTGTAATCTACACCATGTAAATATGCCTGTTCCGGGGAGGTACCAGAGAACTGTACG--GACACCACTGTTGTTGGAAACAAAAACAATGTAAATATGAAATCAAATTGTGTAATCTTATTACAGTATGTTTACCAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E430705" ref_strand="+" ref_description="SGN-E430705 [STM-54-M5]">
      <seq>tccctactttttgtggtaaacatactggtaattatacttacacaatttgatttcatatttacanttgtttttgtttccaacaacagtgggtgtccgtacacgttctctggtacctccccggaacaggcatatttacatggtgtagattacaatatacaatacatgttacatcatacatataatgtgagaatggaacaagattcagctgctatctggaggagcctaaagtacactgcttgtgaagtacttctgaaaacaggcctcatctttacagtattctgacatcactttatacacttcaattagtagctgtggaaaccgcctcctaaaatagccatcaaatccttctggaacagttcctaaaatttcctgaaatgaagttgagatgcaccggaagtcaggaaatacaatctgaaatcaacgataatatttccaccttgcagcacactgcttctttgagatgttcccacacaaaaactaattcctcaaaggaagtcttgaccaaatgttaagtccaccaatttgttgaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="+" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="82634" stop="83733"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82948" g_stop="83433" g_length="486"/>
          <reference_exon_boundary r_type="cDNA" r_start="45" r_stop="531" r_length="487" r_score="0.928"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="+" ref_id="SGN-E430705" ref_strand="+">
        <total_alignment_score>0.928</total_alignment_score>
        <cumulative_length_of_scored_exons>486</cumulative_length_of_scored_exons>
        <coverage percentage="0.915" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E430705" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82948" e_stop="83433"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTGGTTTCATATATACA-TTATTTTTGTTTCCAACAACAGTGGTGTATTCGGACA-GCTTTCTGGTACCTCCCCGGCACAGGCATATTTACATAGTGTATATTACAATTTACAATACATGTTACATCATACATGTAATGTAAGAATGGAACAAGATTAAGCTACTATCTGGAGGAGCCTAAAGTACACTGCTTGTGAAGTACTTCTGAAAACAGGCTTCATCTTTACAGTATTCTGACATCACTTTATACACTTCAATTAGTAGCCGCGGAAACCGCCTCCTAAAATAGCCATCAAATCCTTCTGGAACGGTTCCTATAATTTCCTGAAATGAAGTGAAGATACACCGGAAGTCAGCAAATACAATCTGAAATCATCGATAATATTTCCACCTTACAGCACACTGGTTCTTCGAGATGTTCCCACACAAAAACTAATTCCTCAAAGGAAGTCTTGACCAAATGTTAAGTGCACCAATTTGTTGAAT</genome_strand>
        <mrna_strand>ATTTGATTTCATATTTACANTTGTTTTTGTTTCCAACAACAGTGG-GTGTCCGTACACGTTCTCTGGTACCTCCCCGGAACAGGCATATTTACATGGTGTAGATTACAATATACAATACATGTTACATCATACATATAATGTGAGAATGGAACAAGATTCAGCTGCTATCTGGAGGAGCCTAAAGTACACTGCTTGTGAAGTACTTCTGAAAACAGGCCTCATCTTTACAGTATTCTGACATCACTTTATACACTTCAATTAGTAGCTGTGGAAACCGCCTCCTAAAATAGCCATCAAATCCTTCTGGAACAGTTCCTAAAATTTCCTGAAATGAAGTTGAGATGCACCGGAAGTCAGGAAATACAATCTGAAATCAACGATAATATTTCCACCTTGCAGCACACTGCTTCTTTGAGATGTTCCCACACAAAAACTAATTCCTCAAAGGAAGTCTTGACCAAATGTTAAGTCCACCAATTTGTTGAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E331854" ref_strand="+" ref_description="SGN-E331854 [cTOD-7-J3]">
      <seq>acacatccctgaagctgtggatctcttttctcgtttgttagatcccattgctgaactgagaccaaaggcagtgaaggtgcttgctcatcctttcttttggactgctgagatgcgactgtcatttcttcgtgattcaagcgacagggtggaacttgaagatagggagacttcttctgatcttctgaaagcattagaaggtacagcgcctgtggctttgggtggaaaatgggatgagaagatggaacctcctttcataaaaaatattggccattacaggcgatatagatttgacagtattcgtgatttgctgcgtgtgatgcggaacaagctaaatcattatagagagcttcccaccgaaattcaggaaattataggaaccgttccagaaggatttgatggctattttaggaggcggtttccgcggctactaattgaagtgtataaagtgatgtcagaatactgtaaagatgaagcctgttttcagaagtacttcacaagcagtgtactttaggctcctccagatagtagcttaatcttgttccattcttacattacatgtatgatgtaacatgtattgtaaattgtaatatacactatgtaaatatgcctgtgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="-" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="85227" stop="82723"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="84927" g_stop="84868" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="60" r_length="60" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="84867" i_stop="83788" i_length="1080">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.661" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="83787" g_stop="83484" g_length="304"/>
          <reference_exon_boundary r_type="cDNA" r_start="61" r_stop="364" r_length="304" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="83483" i_stop="83272" i_length="212">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.967" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="83271" g_stop="83023" g_length="249"/>
          <reference_exon_boundary r_type="cDNA" r_start="365" r_stop="613" r_length="249" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="-" ref_id="SGN-E331854" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>613</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E331854" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="84927" e_stop="84868"/>
          <exon e_start="83787" e_stop="83484"/>
          <exon e_start="83271" e_stop="83023"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACACATCCCTGAAGCTGTGGATCTCTTTTCTCGTTTGTTAGATCCCATTGCTGAACTGAGGTAAGAAGTGCACATGTTTTATATAATGAAAATTTTATTACATCCCGCACATACCAATAACTATTGACAAATTTAGAGTTCTTTATTGACCATGACATCCTTGTAGCTAGTTATGGCTGGAACTTCTCTTCGAATTGCAATACTGTTTTCATACTCTAAAAATGTTTGTGACAAAAAGAAACGAAGTGACTTAGCTTACGACCACTGAACAAACTTGGTTGACGAACATAGTTTATGCGCCGCTAATGTAGCGGCTAGTTCTTTATTGACCATGACATCCTTGTAGCTAGTTATGGCTGGAACTTCTCTTTGAATTGCAATACTGTTTTCATACTCTAAAAATGTTTGTGAAGATGACTATACCCTTTTTATCTCCCTTTAAAATTAAAGCTCCTGCATGGTGATTTTCAAAGTACAAAGAATATTTTTTGTATATTCAGTGAAGAAGGTAGGAATGATGATTATGACTATTAGCATGTGTACAATCAAGTTTTAGCTCAACTAATGTTTCAGCTGTATTTAGTTTAGTAATGTGCTTGATAAGTTTCAGACCCATTCAACGTATTAAGTAGGCTGTGCAGTTATTTCTTCACTGCTGTTCAGGAATGCAAGAAACATCTCTGTATCAGTATTACCTATTTTATTTCTTTAGATCTTAAAAAATGACTGCGTATAAAAAGATTCTTAGAAAATCCAGTACTAGCTAGGGGCTAGAGTCAGAGTCGTAATTTTGCATACTTGAGGTGCAAGGCTTGATCCTCACAATAGACCCATAGGCATCCCTTTCCCCACCCTGACCACCATTATCCCTGTCAAGAAATAGTAATTTTTGAAAAAAAAAGGAAAGAAAAAACAGACAATGTAAGAAAAATAAAGAAAATTAGAGGTTTTTTCTTCATGAATTGGTAGCTATCTTAGCACATTGAGGTGTAGCTGTATTTTCAATTAATATAACATTAACATTGTAATGGGAAAACTCCTAAACCGTTCTCTTGGATAAAGTGCATGTCCTGCTAGTCTATGTACACTGTGCCTGCCTATTGCTAAATCCTCTTTTTTTTCCTTTAAATTCTGTCAAAGACCAAAGGCAGTGAAGGTGCTTGCTCATCCTTTCTTTTGGACTGCTGAGATGCGACTGTCATTTCTTCGTGATTCAAGCGACAGGGTGGAACTTGAAGATAGGGAGACTTCTTCTGATCTTCTGAAAGCATTAGAAGGTACAGCGCCTGTGGCTTTGGGTGGAAAATGGGATGAGAAGATGGAACCTCCTTTCATAAAAAATATTGGCCATTACAGGCGATATAGATTTGACAGTATTCGTGATTTGCTGCGTGTGATGCGGAACAAGCTAAATCATTATAGAGAGCTTCCCACCGAAATTCAGGTTAGTTTTGATCAACTTATATAGTACTTTACTACTTAATACGTATTGCTATTCAACAAATTGGTGCACTTAACATTTGGTCAAGACTTCCTTTGAGGAATTAGTTTTTGTGTGGGAACATCTCGAAGAACCAGTGTGCTGTAAGGTGGAAATATTATCGATGATTTCAGATTGTATTTGCTGACTTCCGGTGTATCTTCACTTCATTTCAGGAAATTATAGGAACCGTTCCAGAAGGATTTGATGGCTATTTTAGGAGGCGGTTTCCGCGGCTACTAATTGAAGTGTATAAAGTGATGTCAGAATACTGTAAAGATGAAGCCTGTTTTCAGAAGTACTTCACAAGCAGTGTACTTTAGGCTCCTCCAGATAGTAGCTTAATCTTGTTCCATTCTTACATTACATGTATGATGTAACATGTATTGTAAATTGTAATATACACTATGTAAATATGCCTGTGC</genome_strand>
        <mrna_strand>ACACATCCCTGAAGCTGTGGATCTCTTTTCTCGTTTGTTAGATCCCATTGCTGAACTGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAAAGGCAGTGAAGGTGCTTGCTCATCCTTTCTTTTGGACTGCTGAGATGCGACTGTCATTTCTTCGTGATTCAAGCGACAGGGTGGAACTTGAAGATAGGGAGACTTCTTCTGATCTTCTGAAAGCATTAGAAGGTACAGCGCCTGTGGCTTTGGGTGGAAAATGGGATGAGAAGATGGAACCTCCTTTCATAAAAAATATTGGCCATTACAGGCGATATAGATTTGACAGTATTCGTGATTTGCTGCGTGTGATGCGGAACAAGCTAAATCATTATAGAGAGCTTCCCACCGAAATTCAG....................................................................................................................................................................................................................GAAATTATAGGAACCGTTCCAGAAGGATTTGATGGCTATTTTAGGAGGCGGTTTCCGCGGCTACTAATTGAAGTGTATAAAGTGATGTCAGAATACTGTAAAGATGAAGCCTGTTTTCAGAAGTACTTCACAAGCAGTGTACTTTAGGCTCCTCCAGATAGTAGCTTAATCTTGTTCCATTCTTACATTACATGTATGATGTAACATGTATTGTAAATTGTAATATACACTATGTAAATATGCCTGTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E431775" ref_strand="+" ref_description="SGN-E431775 [STM-56-C3]">
      <seq>gcaagcgcctcattggagatatgtcttcattgggtcatcacccaacaggttatggaagttcgggatggcaagctcctgaacaacttcttcatggacgtcaaacacgtgctattgatatgttcagtctggggtctgttctgtttttctgcatgactggtggtcgtcatccctttggaagtcctcttgagcgtgacattaacattacaaagaataaagtggatcttttcttgtcggaacacatccctgaagctgtggatctcttttctcgtttgttagatcccaatgctgaactgagaccaaaggcagtgaaggtgcttgctcatcctttcttttggactgctgagatgcgactgtcatttcttcgtgactcaagcgacagggtggaacttgaagatagggagacttcttctgatcttctgaaagcattagaaggtacagcgcctgtggctttgggtggaaaatgggatgagaagatggagcctcctttcataaaaaatattggccattacaggcgatatagatttgacagtattcgtgatttgctgcgtgtgatgcggaacaagctaaatcattatagagagcttcccaccgaaattcaggaaattttangaactgttccagaaggatttgatggctattttaggaggcggtttccacaactactaattgaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="-" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="85775" stop="82900"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="85475" g_stop="85428" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="48" r_length="48" r_score="0.979"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="85427" i_stop="85115" i_length="313">
            <donor d_prob="0.000" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="85114" g_stop="84868" g_length="247"/>
          <reference_exon_boundary r_type="cDNA" r_start="49" r_stop="295" r_length="247" r_score="0.988"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="84867" i_stop="83788" i_length="1080">
            <donor d_prob="0.997" d_score="0.98"/>
            <acceptor a_prob="0.661" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="83787" g_stop="83484" g_length="304"/>
          <reference_exon_boundary r_type="cDNA" r_start="296" r_stop="599" r_length="304" r_score="0.993"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="83483" i_stop="83272" i_length="212">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.967" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="83271" g_stop="83200" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="600" r_stop="671" r_length="72" r_score="0.917"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="-" ref_id="SGN-E431775" ref_strand="+">
        <total_alignment_score>0.982</total_alignment_score>
        <cumulative_length_of_scored_exons>671</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E431775" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="85475" e_stop="85428"/>
          <exon e_start="85114" e_stop="84868"/>
          <exon e_start="83787" e_stop="83484"/>
          <exon e_start="83271" e_stop="83200"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAAGCGCCTCATTGGAGATATGTCTTCATTGGGTCATCGCCCAACAGGCAAGTAATTGTAAAGTATGTAGCTAAAAAATTAGCTGCTAGTGAAGTTATCTTCAGTTCCACCACCATTAAGTATGCTCCTTTATCTAGTAATTTGCATGACACATTGAGCATCTCTACAATGTCGTCCTTGCTGCATTCAGGAGAAGATTGTTTGATTGACAGCTGAGTTCAATTTCAGTTTCTCACACCAGATTCTTCTTTTAGTGGCCTTAGCTTTTATATTTTCTTTCAGAGTTTGCCATAGCATGATGTCTTTAACTTTTTAACGCATATTTCTCCCTGTTCTTACTCGGCAATAATTTTTTTGCAGGTTATGGAAGTTCTGGATGGCAAGCTCCTGAACAACTTCTTCATGGACGTCAAACACGTGCTATTGATATGTTCAGTCTGGGGTCTGTTCTGTTTTTCTGCATGACTGGTGGTCGTCATCCCTTTGGAAGTCCTCTTGAGCGTGACATTAACATTACAAAGAATAAAATGGATCTTTTCTTGTCGGAACACATCCCTGAAGCTGTGGATCTCTTTTCTCGTTTGTTAGATCCCATTGCTGAACTGAGGTAAGAAGTGCACATGTTTTATATAATGAAAATTTTATTACATCCCGCACATACCAATAACTATTGACAAATTTAGAGTTCTTTATTGACCATGACATCCTTGTAGCTAGTTATGGCTGGAACTTCTCTTCGAATTGCAATACTGTTTTCATACTCTAAAAATGTTTGTGACAAAAAGAAACGAAGTGACTTAGCTTACGACCACTGAACAAACTTGGTTGACGAACATAGTTTATGCGCCGCTAATGTAGCGGCTAGTTCTTTATTGACCATGACATCCTTGTAGCTAGTTATGGCTGGAACTTCTCTTTGAATTGCAATACTGTTTTCATACTCTAAAAATGTTTGTGAAGATGACTATACCCTTTTTATCTCCCTTTAAAATTAAAGCTCCTGCATGGTGATTTTCAAAGTACAAAGAATATTTTTTGTATATTCAGTGAAGAAGGTAGGAATGATGATTATGACTATTAGCATGTGTACAATCAAGTTTTAGCTCAACTAATGTTTCAGCTGTATTTAGTTTAGTAATGTGCTTGATAAGTTTCAGACCCATTCAACGTATTAAGTAGGCTGTGCAGTTATTTCTTCACTGCTGTTCAGGAATGCAAGAAACATCTCTGTATCAGTATTACCTATTTTATTTCTTTAGATCTTAAAAAATGACTGCGTATAAAAAGATTCTTAGAAAATCCAGTACTAGCTAGGGGCTAGAGTCAGAGTCGTAATTTTGCATACTTGAGGTGCAAGGCTTGATCCTCACAATAGACCCATAGGCATCCCTTTCCCCACCCTGACCACCATTATCCCTGTCAAGAAATAGTAATTTTTGAAAAAAAAAGGAAAGAAAAAACAGACAATGTAAGAAAAATAAAGAAAATTAGAGGTTTTTTCTTCATGAATTGGTAGCTATCTTAGCACATTGAGGTGTAGCTGTATTTTCAATTAATATAACATTAACATTGTAATGGGAAAACTCCTAAACCGTTCTCTTGGATAAAGTGCATGTCCTGCTAGTCTATGTACACTGTGCCTGCCTATTGCTAAATCCTCTTTTTTTTCCTTTAAATTCTGTCAAAGACCAAAGGCAGTGAAGGTGCTTGCTCATCCTTTCTTTTGGACTGCTGAGATGCGACTGTCATTTCTTCGTGATTCAAGCGACAGGGTGGAACTTGAAGATAGGGAGACTTCTTCTGATCTTCTGAAAGCATTAGAAGGTACAGCGCCTGTGGCTTTGGGTGGAAAATGGGATGAGAAGATGGAACCTCCTTTCATAAAAAATATTGGCCATTACAGGCGATATAGATTTGACAGTATTCGTGATTTGCTGCGTGTGATGCGGAACAAGCTAAATCATTATAGAGAGCTTCCCACCGAAATTCAGGTTAGTTTTGATCAACTTATATAGTACTTTACTACTTAATACGTATTGCTATTCAACAAATTGGTGCACTTAACATTTGGTCAAGACTTCCTTTGAGGAATTAGTTTTTGTGTGGGAACATCTCGAAGAACCAGTGTGCTGTAAGGTGGAAATATTATCGATGATTTCAGATTGTATTTGCTGACTTCCGGTGTATCTTCACTTCATTTCAGGAAATTATAGGAACCGTTCCAGAAGGATTTGATGGCTATTTTAGGAGGCGGTTTCCGCGGCTACTAATTGAA</genome_strand>
        <mrna_strand>GCAAGCGCCTCATTGGAGATATGTCTTCATTGGGTCATCACCCAACAG.........................................................................................................................................................................................................................................................................................................................GTTATGGAAGTTCGGGATGGCAAGCTCCTGAACAACTTCTTCATGGACGTCAAACACGTGCTATTGATATGTTCAGTCTGGGGTCTGTTCTGTTTTTCTGCATGACTGGTGGTCGTCATCCCTTTGGAAGTCCTCTTGAGCGTGACATTAACATTACAAAGAATAAAGTGGATCTTTTCTTGTCGGAACACATCCCTGAAGCTGTGGATCTCTTTTCTCGTTTGTTAGATCCCAATGCTGAACTGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAAAGGCAGTGAAGGTGCTTGCTCATCCTTTCTTTTGGACTGCTGAGATGCGACTGTCATTTCTTCGTGACTCAAGCGACAGGGTGGAACTTGAAGATAGGGAGACTTCTTCTGATCTTCTGAAAGCATTAGAAGGTACAGCGCCTGTGGCTTTGGGTGGAAAATGGGATGAGAAGATGGAGCCTCCTTTCATAAAAAATATTGGCCATTACAGGCGATATAGATTTGACAGTATTCGTGATTTGCTGCGTGTGATGCGGAACAAGCTAAATCATTATAGAGAGCTTCCCACCGAAATTCAG....................................................................................................................................................................................................................GAAATTTTANGAACTGTTCCAGAAGGATTTGATGGCTATTTTAGGAGGCGGTTTCCACAACTACTAATTGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E465052" ref_strand="+" ref_description="SGN-E465052 [cPRO-19-P8]">
      <seq>gcaagcgcctcattggagatatgtcttcattgggtcatcacccaacaggttatggaagttcgggatggcaagctcctgaacaacttcttcatggacgtcaaacacgtgctattgatatgttcagtctggggtctgttctgtttttctgcatgactggtggtcgtcatccctttggaagtcctcttgagcgtgacattaacattacaaagaataaagtggatcttttcttgtcggaacacatccctgaagctgtggatctcttttctcgtttgttagatcccaatgctgaactgagaccaaaggcagtgaaggtgcttgctcatcctttcttttggactgctgagatgcgactgtcatttcttcgtgactcaagcgacagggtggaacttgaagatagggagacttcttctgatcttctgaaagcattagaaggtacagcgcctgtggctttgggtggaaaatgggatgagaagatggagcctcctttcataaaaaatattggccattacaggcgatatagatttgacagtattcgtgatttgctgcgtgtgatgcgga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="-" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="85775" stop="83225"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="85475" g_stop="85428" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="48" r_length="48" r_score="0.979"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="85427" i_stop="85115" i_length="313">
            <donor d_prob="0.000" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="85114" g_stop="84868" g_length="247"/>
          <reference_exon_boundary r_type="cDNA" r_start="49" r_stop="295" r_length="247" r_score="0.988"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="84867" i_stop="83788" i_length="1080">
            <donor d_prob="0.997" d_score="0.98"/>
            <acceptor a_prob="0.661" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="83787" g_stop="83525" g_length="263"/>
          <reference_exon_boundary r_type="cDNA" r_start="296" r_stop="558" r_length="263" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="-" ref_id="SGN-E465052" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>558</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E465052" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="85475" e_stop="85428"/>
          <exon e_start="85114" e_stop="84868"/>
          <exon e_start="83787" e_stop="83525"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAAGCGCCTCATTGGAGATATGTCTTCATTGGGTCATCGCCCAACAGGCAAGTAATTGTAAAGTATGTAGCTAAAAAATTAGCTGCTAGTGAAGTTATCTTCAGTTCCACCACCATTAAGTATGCTCCTTTATCTAGTAATTTGCATGACACATTGAGCATCTCTACAATGTCGTCCTTGCTGCATTCAGGAGAAGATTGTTTGATTGACAGCTGAGTTCAATTTCAGTTTCTCACACCAGATTCTTCTTTTAGTGGCCTTAGCTTTTATATTTTCTTTCAGAGTTTGCCATAGCATGATGTCTTTAACTTTTTAACGCATATTTCTCCCTGTTCTTACTCGGCAATAATTTTTTTGCAGGTTATGGAAGTTCTGGATGGCAAGCTCCTGAACAACTTCTTCATGGACGTCAAACACGTGCTATTGATATGTTCAGTCTGGGGTCTGTTCTGTTTTTCTGCATGACTGGTGGTCGTCATCCCTTTGGAAGTCCTCTTGAGCGTGACATTAACATTACAAAGAATAAAATGGATCTTTTCTTGTCGGAACACATCCCTGAAGCTGTGGATCTCTTTTCTCGTTTGTTAGATCCCATTGCTGAACTGAGGTAAGAAGTGCACATGTTTTATATAATGAAAATTTTATTACATCCCGCACATACCAATAACTATTGACAAATTTAGAGTTCTTTATTGACCATGACATCCTTGTAGCTAGTTATGGCTGGAACTTCTCTTCGAATTGCAATACTGTTTTCATACTCTAAAAATGTTTGTGACAAAAAGAAACGAAGTGACTTAGCTTACGACCACTGAACAAACTTGGTTGACGAACATAGTTTATGCGCCGCTAATGTAGCGGCTAGTTCTTTATTGACCATGACATCCTTGTAGCTAGTTATGGCTGGAACTTCTCTTTGAATTGCAATACTGTTTTCATACTCTAAAAATGTTTGTGAAGATGACTATACCCTTTTTATCTCCCTTTAAAATTAAAGCTCCTGCATGGTGATTTTCAAAGTACAAAGAATATTTTTTGTATATTCAGTGAAGAAGGTAGGAATGATGATTATGACTATTAGCATGTGTACAATCAAGTTTTAGCTCAACTAATGTTTCAGCTGTATTTAGTTTAGTAATGTGCTTGATAAGTTTCAGACCCATTCAACGTATTAAGTAGGCTGTGCAGTTATTTCTTCACTGCTGTTCAGGAATGCAAGAAACATCTCTGTATCAGTATTACCTATTTTATTTCTTTAGATCTTAAAAAATGACTGCGTATAAAAAGATTCTTAGAAAATCCAGTACTAGCTAGGGGCTAGAGTCAGAGTCGTAATTTTGCATACTTGAGGTGCAAGGCTTGATCCTCACAATAGACCCATAGGCATCCCTTTCCCCACCCTGACCACCATTATCCCTGTCAAGAAATAGTAATTTTTGAAAAAAAAAGGAAAGAAAAAACAGACAATGTAAGAAAAATAAAGAAAATTAGAGGTTTTTTCTTCATGAATTGGTAGCTATCTTAGCACATTGAGGTGTAGCTGTATTTTCAATTAATATAACATTAACATTGTAATGGGAAAACTCCTAAACCGTTCTCTTGGATAAAGTGCATGTCCTGCTAGTCTATGTACACTGTGCCTGCCTATTGCTAAATCCTCTTTTTTTTCCTTTAAATTCTGTCAAAGACCAAAGGCAGTGAAGGTGCTTGCTCATCCTTTCTTTTGGACTGCTGAGATGCGACTGTCATTTCTTCGTGATTCAAGCGACAGGGTGGAACTTGAAGATAGGGAGACTTCTTCTGATCTTCTGAAAGCATTAGAAGGTACAGCGCCTGTGGCTTTGGGTGGAAAATGGGATGAGAAGATGGAACCTCCTTTCATAAAAAATATTGGCCATTACAGGCGATATAGATTTGACAGTATTCGTGATTTGCTGCGTGTGATGCGGA</genome_strand>
        <mrna_strand>GCAAGCGCCTCATTGGAGATATGTCTTCATTGGGTCATCACCCAACAG.........................................................................................................................................................................................................................................................................................................................GTTATGGAAGTTCGGGATGGCAAGCTCCTGAACAACTTCTTCATGGACGTCAAACACGTGCTATTGATATGTTCAGTCTGGGGTCTGTTCTGTTTTTCTGCATGACTGGTGGTCGTCATCCCTTTGGAAGTCCTCTTGAGCGTGACATTAACATTACAAAGAATAAAGTGGATCTTTTCTTGTCGGAACACATCCCTGAAGCTGTGGATCTCTTTTCTCGTTTGTTAGATCCCAATGCTGAACTGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAAAGGCAGTGAAGGTGCTTGCTCATCCTTTCTTTTGGACTGCTGAGATGCGACTGTCATTTCTTCGTGACTCAAGCGACAGGGTGGAACTTGAAGATAGGGAGACTTCTTCTGATCTTCTGAAAGCATTAGAAGGTACAGCGCCTGTGGCTTTGGGTGGAAAATGGGATGAGAAGATGGAGCCTCCTTTCATAAAAAATATTGGCCATTACAGGCGATATAGATTTGACAGTATTCGTGATTTGCTGCGTGTGATGCGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E345231" ref_strand="+" ref_description="SGN-E345231 [cTOF-13-G10]">
      <seq>gtttctggtcttgtgcatcttcatgatctggggatcattcatcgagacctgaagccccaaaatgttctgataactaaggaaaaattcttatgtgctaagctttctgatatgggaatcagcaagcgcctcattggagatatgtcttcattgggtcatcgcccaacaggttatggaagttctggatggcaagctcctgaacaacttcttcatggacgtcaaacacgtgctattgatatgttcagtctggggtctgttctgtttttctgcatgactggtggtcgtcatccctttggaagtcctcttgagcgtgacattaacattacaaagaataaaatggatcttttcttgtcggaacacatccctgaagctgtggatctcttttctcgtttgttagatcccattgctgaactgagaccaaaggcagtgaaggtgcttgctcatcctttcttttggactgctgagatgcgactgtcatttcttcgtgattcaagcgacagggtggaacttgaagatagggagacttcttctgatcttctgaaagcatttagaggtacagcgcctgtggctttgggtggaaaatgggatgagaagatggaacctnctttcataaaaaatattggc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="-" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="85893" stop="83280"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="85593" g_stop="85428" g_length="166"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="166" r_length="166" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="85427" i_stop="85115" i_length="313">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="85114" g_stop="84868" g_length="247"/>
          <reference_exon_boundary r_type="cDNA" r_start="167" r_stop="413" r_length="247" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="84867" i_stop="83788" i_length="1080">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.661" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="83787" g_stop="83580" g_length="208"/>
          <reference_exon_boundary r_type="cDNA" r_start="414" r_stop="621" r_length="208" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="-" ref_id="SGN-E345231" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>621</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E345231" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="85593" e_stop="85428"/>
          <exon e_start="85114" e_stop="84868"/>
          <exon e_start="83787" e_stop="83580"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTCTGGTCTTGTGCATCTTCATGATCTGGGGATCATTCATCGAGACCTGAAGCCCCAAAATGTTCTGATAACTAAGGAAAAATTCTTATGTGCTAAGCTTTCTGATATGGGAATCAGCAAGCGCCTCATTGGAGATATGTCTTCATTGGGTCATCGCCCAACAGGCAAGTAATTGTAAAGTATGTAGCTAAAAAATTAGCTGCTAGTGAAGTTATCTTCAGTTCCACCACCATTAAGTATGCTCCTTTATCTAGTAATTTGCATGACACATTGAGCATCTCTACAATGTCGTCCTTGCTGCATTCAGGAGAAGATTGTTTGATTGACAGCTGAGTTCAATTTCAGTTTCTCACACCAGATTCTTCTTTTAGTGGCCTTAGCTTTTATATTTTCTTTCAGAGTTTGCCATAGCATGATGTCTTTAACTTTTTAACGCATATTTCTCCCTGTTCTTACTCGGCAATAATTTTTTTGCAGGTTATGGAAGTTCTGGATGGCAAGCTCCTGAACAACTTCTTCATGGACGTCAAACACGTGCTATTGATATGTTCAGTCTGGGGTCTGTTCTGTTTTTCTGCATGACTGGTGGTCGTCATCCCTTTGGAAGTCCTCTTGAGCGTGACATTAACATTACAAAGAATAAAATGGATCTTTTCTTGTCGGAACACATCCCTGAAGCTGTGGATCTCTTTTCTCGTTTGTTAGATCCCATTGCTGAACTGAGGTAAGAAGTGCACATGTTTTATATAATGAAAATTTTATTACATCCCGCACATACCAATAACTATTGACAAATTTAGAGTTCTTTATTGACCATGACATCCTTGTAGCTAGTTATGGCTGGAACTTCTCTTCGAATTGCAATACTGTTTTCATACTCTAAAAATGTTTGTGACAAAAAGAAACGAAGTGACTTAGCTTACGACCACTGAACAAACTTGGTTGACGAACATAGTTTATGCGCCGCTAATGTAGCGGCTAGTTCTTTATTGACCATGACATCCTTGTAGCTAGTTATGGCTGGAACTTCTCTTTGAATTGCAATACTGTTTTCATACTCTAAAAATGTTTGTGAAGATGACTATACCCTTTTTATCTCCCTTTAAAATTAAAGCTCCTGCATGGTGATTTTCAAAGTACAAAGAATATTTTTTGTATATTCAGTGAAGAAGGTAGGAATGATGATTATGACTATTAGCATGTGTACAATCAAGTTTTAGCTCAACTAATGTTTCAGCTGTATTTAGTTTAGTAATGTGCTTGATAAGTTTCAGACCCATTCAACGTATTAAGTAGGCTGTGCAGTTATTTCTTCACTGCTGTTCAGGAATGCAAGAAACATCTCTGTATCAGTATTACCTATTTTATTTCTTTAGATCTTAAAAAATGACTGCGTATAAAAAGATTCTTAGAAAATCCAGTACTAGCTAGGGGCTAGAGTCAGAGTCGTAATTTTGCATACTTGAGGTGCAAGGCTTGATCCTCACAATAGACCCATAGGCATCCCTTTCCCCACCCTGACCACCATTATCCCTGTCAAGAAATAGTAATTTTTGAAAAAAAAAGGAAAGAAAAAACAGACAATGTAAGAAAAATAAAGAAAATTAGAGGTTTTTTCTTCATGAATTGGTAGCTATCTTAGCACATTGAGGTGTAGCTGTATTTTCAATTAATATAACATTAACATTGTAATGGGAAAACTCCTAAACCGTTCTCTTGGATAAAGTGCATGTCCTGCTAGTCTATGTACACTGTGCCTGCCTATTGCTAAATCCTCTTTTTTTTCCTTTAAATTCTGTCAAAGACCAAAGGCAGTGAAGGTGCTTGCTCATCCTTTCTTTTGGACTGCTGAGATGCGACTGTCATTTCTTCGTGATTCAAGCGACAGGGTGGAACTTGAAGATAGGGAGACTTCTTCTGATCTTCTGAAAGCATTAGAAGGTACAGCGCCTGTGGCTTTGGGTGGAAAATGGGATGAGAAGATGGAACCTCCTTTCATAAAAAATATTGGC</genome_strand>
        <mrna_strand>GTTTCTGGTCTTGTGCATCTTCATGATCTGGGGATCATTCATCGAGACCTGAAGCCCCAAAATGTTCTGATAACTAAGGAAAAATTCTTATGTGCTAAGCTTTCTGATATGGGAATCAGCAAGCGCCTCATTGGAGATATGTCTTCATTGGGTCATCGCCCAACAG.........................................................................................................................................................................................................................................................................................................................GTTATGGAAGTTCTGGATGGCAAGCTCCTGAACAACTTCTTCATGGACGTCAAACACGTGCTATTGATATGTTCAGTCTGGGGTCTGTTCTGTTTTTCTGCATGACTGGTGGTCGTCATCCCTTTGGAAGTCCTCTTGAGCGTGACATTAACATTACAAAGAATAAAATGGATCTTTTCTTGTCGGAACACATCCCTGAAGCTGTGGATCTCTTTTCTCGTTTGTTAGATCCCATTGCTGAACTGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAAAGGCAGTGAAGGTGCTTGCTCATCCTTTCTTTTGGACTGCTGAGATGCGACTGTCATTTCTTCGTGATTCAAGCGACAGGGTGGAACTTGAAGATAGGGAGACTTCTTCTGATCTTCTGAAAGCATTTAGAGGTACAGCGCCTGTGGCTTTGGGTGGAAAATGGGATGAGAAGATGGAACCTNCTTTCATAAAAAATATTGGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E342874" ref_strand="+" ref_description="SGN-E342874 [cTOF-7-P8]">
      <seq>gtttctggtcttgtgcatcttcatgatctggggatcattcatcgagacctgaagccccaaaatgttctgataactaaggaaaaattcttatgtgctaagctttctgatatgggaatcagcaagcgcctcattggagatatgtcttcattgggtcatcgcccaacaggttatggaagttctggatggcaagctcctgaacaacttcttcatggacgtcaaacacgtgctattgatatgttcagtctggggtctgttctgtttttctgcatgactggtggtcgtcatccctttggaagtcctcttgagcgtgacattaacattacaaagaataaaatggatcttttcttgtcggaacacatccctgaagctgtggatctcttttctcgtttgttagatcccattgctgaactgagaccaaaggcagtgaaggtgcttgctcatcctttcttttggactgctgagatgcgactgtcatttcttcgtgattcaagcgacagggtggaacttgaagatagggagacttcttctgatcttctgaaagcattagaaggtacagcgcctgtggctttgggtggaaaatgggatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="-" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="85893" stop="83315"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="85593" g_stop="85428" g_length="166"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="166" r_length="166" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="85427" i_stop="85115" i_length="313">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="85114" g_stop="84868" g_length="247"/>
          <reference_exon_boundary r_type="cDNA" r_start="167" r_stop="413" r_length="247" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="84867" i_stop="83788" i_length="1080">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.661" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="83787" g_stop="83615" g_length="173"/>
          <reference_exon_boundary r_type="cDNA" r_start="414" r_stop="586" r_length="173" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="-" ref_id="SGN-E342874" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>586</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E342874" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="85593" e_stop="85428"/>
          <exon e_start="85114" e_stop="84868"/>
          <exon e_start="83787" e_stop="83615"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTCTGGTCTTGTGCATCTTCATGATCTGGGGATCATTCATCGAGACCTGAAGCCCCAAAATGTTCTGATAACTAAGGAAAAATTCTTATGTGCTAAGCTTTCTGATATGGGAATCAGCAAGCGCCTCATTGGAGATATGTCTTCATTGGGTCATCGCCCAACAGGCAAGTAATTGTAAAGTATGTAGCTAAAAAATTAGCTGCTAGTGAAGTTATCTTCAGTTCCACCACCATTAAGTATGCTCCTTTATCTAGTAATTTGCATGACACATTGAGCATCTCTACAATGTCGTCCTTGCTGCATTCAGGAGAAGATTGTTTGATTGACAGCTGAGTTCAATTTCAGTTTCTCACACCAGATTCTTCTTTTAGTGGCCTTAGCTTTTATATTTTCTTTCAGAGTTTGCCATAGCATGATGTCTTTAACTTTTTAACGCATATTTCTCCCTGTTCTTACTCGGCAATAATTTTTTTGCAGGTTATGGAAGTTCTGGATGGCAAGCTCCTGAACAACTTCTTCATGGACGTCAAACACGTGCTATTGATATGTTCAGTCTGGGGTCTGTTCTGTTTTTCTGCATGACTGGTGGTCGTCATCCCTTTGGAAGTCCTCTTGAGCGTGACATTAACATTACAAAGAATAAAATGGATCTTTTCTTGTCGGAACACATCCCTGAAGCTGTGGATCTCTTTTCTCGTTTGTTAGATCCCATTGCTGAACTGAGGTAAGAAGTGCACATGTTTTATATAATGAAAATTTTATTACATCCCGCACATACCAATAACTATTGACAAATTTAGAGTTCTTTATTGACCATGACATCCTTGTAGCTAGTTATGGCTGGAACTTCTCTTCGAATTGCAATACTGTTTTCATACTCTAAAAATGTTTGTGACAAAAAGAAACGAAGTGACTTAGCTTACGACCACTGAACAAACTTGGTTGACGAACATAGTTTATGCGCCGCTAATGTAGCGGCTAGTTCTTTATTGACCATGACATCCTTGTAGCTAGTTATGGCTGGAACTTCTCTTTGAATTGCAATACTGTTTTCATACTCTAAAAATGTTTGTGAAGATGACTATACCCTTTTTATCTCCCTTTAAAATTAAAGCTCCTGCATGGTGATTTTCAAAGTACAAAGAATATTTTTTGTATATTCAGTGAAGAAGGTAGGAATGATGATTATGACTATTAGCATGTGTACAATCAAGTTTTAGCTCAACTAATGTTTCAGCTGTATTTAGTTTAGTAATGTGCTTGATAAGTTTCAGACCCATTCAACGTATTAAGTAGGCTGTGCAGTTATTTCTTCACTGCTGTTCAGGAATGCAAGAAACATCTCTGTATCAGTATTACCTATTTTATTTCTTTAGATCTTAAAAAATGACTGCGTATAAAAAGATTCTTAGAAAATCCAGTACTAGCTAGGGGCTAGAGTCAGAGTCGTAATTTTGCATACTTGAGGTGCAAGGCTTGATCCTCACAATAGACCCATAGGCATCCCTTTCCCCACCCTGACCACCATTATCCCTGTCAAGAAATAGTAATTTTTGAAAAAAAAAGGAAAGAAAAAACAGACAATGTAAGAAAAATAAAGAAAATTAGAGGTTTTTTCTTCATGAATTGGTAGCTATCTTAGCACATTGAGGTGTAGCTGTATTTTCAATTAATATAACATTAACATTGTAATGGGAAAACTCCTAAACCGTTCTCTTGGATAAAGTGCATGTCCTGCTAGTCTATGTACACTGTGCCTGCCTATTGCTAAATCCTCTTTTTTTTCCTTTAAATTCTGTCAAAGACCAAAGGCAGTGAAGGTGCTTGCTCATCCTTTCTTTTGGACTGCTGAGATGCGACTGTCATTTCTTCGTGATTCAAGCGACAGGGTGGAACTTGAAGATAGGGAGACTTCTTCTGATCTTCTGAAAGCATTAGAAGGTACAGCGCCTGTGGCTTTGGGTGGAAAATGGGATG</genome_strand>
        <mrna_strand>GTTTCTGGTCTTGTGCATCTTCATGATCTGGGGATCATTCATCGAGACCTGAAGCCCCAAAATGTTCTGATAACTAAGGAAAAATTCTTATGTGCTAAGCTTTCTGATATGGGAATCAGCAAGCGCCTCATTGGAGATATGTCTTCATTGGGTCATCGCCCAACAG.........................................................................................................................................................................................................................................................................................................................GTTATGGAAGTTCTGGATGGCAAGCTCCTGAACAACTTCTTCATGGACGTCAAACACGTGCTATTGATATGTTCAGTCTGGGGTCTGTTCTGTTTTTCTGCATGACTGGTGGTCGTCATCCCTTTGGAAGTCCTCTTGAGCGTGACATTAACATTACAAAGAATAAAATGGATCTTTTCTTGTCGGAACACATCCCTGAAGCTGTGGATCTCTTTTCTCGTTTGTTAGATCCCATTGCTGAACTGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAAAGGCAGTGAAGGTGCTTGCTCATCCTTTCTTTTGGACTGCTGAGATGCGACTGTCATTTCTTCGTGATTCAAGCGACAGGGTGGAACTTGAAGATAGGGAGACTTCTTCTGATCTTCTGAAAGCATTAGAAGGTACAGCGCCTGTGGCTTTGGGTGGAAAATGGGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E707816" ref_strand="+" ref_description="SGN-E707816 [FA34AC02]">
      <seq>cctttaaagagatacagaatcttattgcatctgatcgacatccaaatatcgttcggtggtatggtgtggaacaagaccaagattttgtttatcttgctttggaacgctgcatttgcagcttgagtgaccttattcagatttatgctgacacttcagaaaatgcttgtcctaaccagaacttggatggagaatctatgaagcatagacgttatttggacaatttgaagggtattattctggatactgacctaatgaatgaaaatggttgtccttcacccctgttgctcaaattgatgagggatgtggtttctggtcttgtgcatcttcatgatctggggatcattcatcgagacctgaagccccaaaatgttctgataactaaggaaaaattcttatgtgctaagctttctgatatgggaatcagcaagcgcctcattggagatatgtcttcattgggtcatcgcccaacaggttatggaagttctggatggcaagctcctgaacaacttcttcatggacgtcaaacacgtgctattgatatgttcagtctggggtctgttctgtttttctgcatgactggtggtcgtcatccctttggaagtcctcttgagcgtgacattaacattacaaagaataaaatggatcttttcttgtcggaacacatccctgaagctgtggatctcttttctcgtttgttagatcccattgctgaactgagaccaaaggcagtgaaggtgcttgctcatcctttcttttggactgctgagatgcgactgtcatttcttcgtgattcaagcgacagggtggaacttgaagatagggagacttcttctgatcttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="-" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="87000" stop="83366"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="86700" g_stop="86403" g_length="298"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="298" r_length="298" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="86402" i_stop="85601" i_length="802">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.933" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="85600" g_stop="85428" g_length="173"/>
          <reference_exon_boundary r_type="cDNA" r_start="299" r_stop="471" r_length="173" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="85427" i_stop="85115" i_length="313">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="85114" g_stop="84868" g_length="247"/>
          <reference_exon_boundary r_type="cDNA" r_start="472" r_stop="718" r_length="247" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="84867" i_stop="83788" i_length="1080">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.661" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="83787" g_stop="83666" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="719" r_stop="840" r_length="122" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="-" ref_id="SGN-E707816" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>840</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E707816" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="86700" e_stop="86403"/>
          <exon e_start="85600" e_stop="85428"/>
          <exon e_start="85114" e_stop="84868"/>
          <exon e_start="83787" e_stop="83666"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTTCAAAGAGATACAGAATCTTATTGCATCTGATCGACATCCAAATATCGTTCGGTGGTATGGTGTGGAACAAGACCAAGATTTTGTTTATCTTGCTTTGGAACGCTGCATTTGCAGCTTGAGTGACCTTATTCAGATTTATGCTGACACTTCAGAAAATGCTTGTCCTAACCAGAACTTGGATGGAGAATCTATGAAGCATAGACGTTATTTGGACAATTTGAAGGGTATTATTCTGGATACTGACCTAATGAATGAAAATGGTTGTCCTTCACCCCTGTTGCTCAAATTGATGAGGTTTGTTGAGTTATTTTATATCAGCTTGTGCCTCTTATCATTGTTTCATGGTATATGAGGGTATTTTGCAATCCATTAGATGATGATTTGAAAAAGGCTGAGCTCACTTCGGAAGAAAGCCCCTCCCCCCCCTTCTATTTCTTGCCTGTTTAATTCTAAAAGATCATATAGTTTGGCTTTTCTTCCTATGTATACCAGACATCAGGTCTCTAGAGGGCCTTTATTTAGGTAAAGAACTCATCGAAATTCACTTTGTTGAATTTTTGTTTGTCCCGCCCGCGGATAGATCTGGGAAGTTAGACAAGAAAATTCCATCACATTCTTCTGACTCATAATTTCTTGTGACAATGGCTTTACAATGGGCCTTTTCAGTGCTTTTGTCTTTATAACTTTTAGGTCTTGGTGCTTTCTCATCCATGCTGTCTCATCTGTTTTCTTTTATGATTTTGCTTTGCTAACTTTTTGAATGGTCTGATAAAATAGGTCACCTGCTAGCCTATCCCATCTGCAGTGGGAAAGAAGGGACCTCTACAAATGCTCCTTCCTTTACCAATCATTAAAAATTTTCTGCATCTTGCATTTCCCGACTGTCATCTTCTGCTTGGTTGATATGCGCTTATAAGATATATATTGCTGTTTCCGTGCATATAAATTGTAATATGTGCCCTGGTAGTGGATGTTAAACATAAATTTAATCTGAAAACCATTTTCCATTTTTATCTTTTGATTATAATGTTCTGAATTCCAATTTGTCTGGGTATGCACATGTTTTGGTGTTCTGATTTTCTTTTCTGGAGGACAGGGATGTGGTTTCTGGTCTTGTGCATCTTCATGATCTGGGGATCATTCATCGAGACCTGAAGCCCCAAAATGTTCTGATAACTAAGGAAAAATTCTTATGTGCTAAGCTTTCTGATATGGGAATCAGCAAGCGCCTCATTGGAGATATGTCTTCATTGGGTCATCGCCCAACAGGCAAGTAATTGTAAAGTATGTAGCTAAAAAATTAGCTGCTAGTGAAGTTATCTTCAGTTCCACCACCATTAAGTATGCTCCTTTATCTAGTAATTTGCATGACACATTGAGCATCTCTACAATGTCGTCCTTGCTGCATTCAGGAGAAGATTGTTTGATTGACAGCTGAGTTCAATTTCAGTTTCTCACACCAGATTCTTCTTTTAGTGGCCTTAGCTTTTATATTTTCTTTCAGAGTTTGCCATAGCATGATGTCTTTAACTTTTTAACGCATATTTCTCCCTGTTCTTACTCGGCAATAATTTTTTTGCAGGTTATGGAAGTTCTGGATGGCAAGCTCCTGAACAACTTCTTCATGGACGTCAAACACGTGCTATTGATATGTTCAGTCTGGGGTCTGTTCTGTTTTTCTGCATGACTGGTGGTCGTCATCCCTTTGGAAGTCCTCTTGAGCGTGACATTAACATTACAAAGAATAAAATGGATCTTTTCTTGTCGGAACACATCCCTGAAGCTGTGGATCTCTTTTCTCGTTTGTTAGATCCCATTGCTGAACTGAGGTAAGAAGTGCACATGTTTTATATAATGAAAATTTTATTACATCCCGCACATACCAATAACTATTGACAAATTTAGAGTTCTTTATTGACCATGACATCCTTGTAGCTAGTTATGGCTGGAACTTCTCTTCGAATTGCAATACTGTTTTCATACTCTAAAAATGTTTGTGACAAAAAGAAACGAAGTGACTTAGCTTACGACCACTGAACAAACTTGGTTGACGAACATAGTTTATGCGCCGCTAATGTAGCGGCTAGTTCTTTATTGACCATGACATCCTTGTAGCTAGTTATGGCTGGAACTTCTCTTTGAATTGCAATACTGTTTTCATACTCTAAAAATGTTTGTGAAGATGACTATACCCTTTTTATCTCCCTTTAAAATTAAAGCTCCTGCATGGTGATTTTCAAAGTACAAAGAATATTTTTTGTATATTCAGTGAAGAAGGTAGGAATGATGATTATGACTATTAGCATGTGTACAATCAAGTTTTAGCTCAACTAATGTTTCAGCTGTATTTAGTTTAGTAATGTGCTTGATAAGTTTCAGACCCATTCAACGTATTAAGTAGGCTGTGCAGTTATTTCTTCACTGCTGTTCAGGAATGCAAGAAACATCTCTGTATCAGTATTACCTATTTTATTTCTTTAGATCTTAAAAAATGACTGCGTATAAAAAGATTCTTAGAAAATCCAGTACTAGCTAGGGGCTAGAGTCAGAGTCGTAATTTTGCATACTTGAGGTGCAAGGCTTGATCCTCACAATAGACCCATAGGCATCCCTTTCCCCACCCTGACCACCATTATCCCTGTCAAGAAATAGTAATTTTTGAAAAAAAAAGGAAAGAAAAAACAGACAATGTAAGAAAAATAAAGAAAATTAGAGGTTTTTTCTTCATGAATTGGTAGCTATCTTAGCACATTGAGGTGTAGCTGTATTTTCAATTAATATAACATTAACATTGTAATGGGAAAACTCCTAAACCGTTCTCTTGGATAAAGTGCATGTCCTGCTAGTCTATGTACACTGTGCCTGCCTATTGCTAAATCCTCTTTTTTTTCCTTTAAATTCTGTCAAAGACCAAAGGCAGTGAAGGTGCTTGCTCATCCTTTCTTTTGGACTGCTGAGATGCGACTGTCATTTCTTCGTGATTCAAGCGACAGGGTGGAACTTGAAGATAGGGAGACTTCTTCTGATCTTC</genome_strand>
        <mrna_strand>CCTTTAAAGAGATACAGAATCTTATTGCATCTGATCGACATCCAAATATCGTTCGGTGGTATGGTGTGGAACAAGACCAAGATTTTGTTTATCTTGCTTTGGAACGCTGCATTTGCAGCTTGAGTGACCTTATTCAGATTTATGCTGACACTTCAGAAAATGCTTGTCCTAACCAGAACTTGGATGGAGAATCTATGAAGCATAGACGTTATTTGGACAATTTGAAGGGTATTATTCTGGATACTGACCTAATGAATGAAAATGGTTGTCCTTCACCCCTGTTGCTCAAATTGATGAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATGTGGTTTCTGGTCTTGTGCATCTTCATGATCTGGGGATCATTCATCGAGACCTGAAGCCCCAAAATGTTCTGATAACTAAGGAAAAATTCTTATGTGCTAAGCTTTCTGATATGGGAATCAGCAAGCGCCTCATTGGAGATATGTCTTCATTGGGTCATCGCCCAACAG.........................................................................................................................................................................................................................................................................................................................GTTATGGAAGTTCTGGATGGCAAGCTCCTGAACAACTTCTTCATGGACGTCAAACACGTGCTATTGATATGTTCAGTCTGGGGTCTGTTCTGTTTTTCTGCATGACTGGTGGTCGTCATCCCTTTGGAAGTCCTCTTGAGCGTGACATTAACATTACAAAGAATAAAATGGATCTTTTCTTGTCGGAACACATCCCTGAAGCTGTGGATCTCTTTTCTCGTTTGTTAGATCCCATTGCTGAACTGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAAAGGCAGTGAAGGTGCTTGCTCATCCTTTCTTTTGGACTGCTGAGATGCGACTGTCATTTCTTCGTGATTCAAGCGACAGGGTGGAACTTGAAGATAGGGAGACTTCTTCTGATCTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E288755" ref_strand="+" ref_description="SGN-E288755 [cLES-17-E7]">
      <seq>cgtgatttagtagctgaactcaatgggaacctacattcgccaaatgtaccttcaaaaaggaagaagtctcggaagtctggaaagaatgggagcaatggcattaaaagtgataaagacacctcatctggtactggacttaaatatgcagacgtggatgctgataataaactgttgaactttcttcaaccaagtatatgtaccaaaggtggacgctctattggtaaattgtttgtctccagttcagagattgctaaagggagcaatggtacagttgtatttgaaggaatttatgaaggccgtgcagttgctgttaaaagacttgtcagggcacatcatgatattgccttcaaagagatacagaatcttattgcatctgatcgacatccaaatatcgttcggtggtatggtgtggaacaagaccaagattttgtttatcttgctttggaacgctgcatttgcagcttgagtgaccttattcagatttatgctgacacttcagaaaatgctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="-" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="87343" stop="86236"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="87043" g_stop="86536" g_length="508"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="508" r_length="508" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="-" ref_id="SGN-E288755" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>508</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E288755" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="87043" e_stop="86536"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGTGATTTAGTAGCTGAACTCAATGGGAACCTACATTCGCCAAATGTACCTTCAAAAAGGAAGAAGTCTCGGAAGTCTGGAAAGAATGGGAGCAATGGCATTAAAAGTGATAAAGACACCTCATCTGGTACTGGACTTAAATATGCAGACGTGGATGCTGATAATAAACTGTTGAACTTTCTTCAACCAAGTATATGTACCAAAGGTGGACGCTCTATTGGTAAATTGTTTGTCTCCAGTTCAGAGATTGCTAAAGGGAGCAATGGTACAGTTGTATTTGAAGGAATTTATGAAGGCCGTGCAGTTGCTGTTAAAAGACTTGTCAGGGCACATCATGATATTGCCTTCAAAGAGATACAGAATCTTATTGCATCTGATCGACATCCAAATATCGTTCGGTGGTATGGTGTGGAACAAGACCAAGATTTTGTTTATCTTGCTTTGGAACGCTGCATTTGCAGCTTGAGTGACCTTATTCAGATTTATGCTGACACTTCAGAAAATGCTT</genome_strand>
        <mrna_strand>CGTGATTTAGTAGCTGAACTCAATGGGAACCTACATTCGCCAAATGTACCTTCAAAAAGGAAGAAGTCTCGGAAGTCTGGAAAGAATGGGAGCAATGGCATTAAAAGTGATAAAGACACCTCATCTGGTACTGGACTTAAATATGCAGACGTGGATGCTGATAATAAACTGTTGAACTTTCTTCAACCAAGTATATGTACCAAAGGTGGACGCTCTATTGGTAAATTGTTTGTCTCCAGTTCAGAGATTGCTAAAGGGAGCAATGGTACAGTTGTATTTGAAGGAATTTATGAAGGCCGTGCAGTTGCTGTTAAAAGACTTGTCAGGGCACATCATGATATTGCCTTCAAAGAGATACAGAATCTTATTGCATCTGATCGACATCCAAATATCGTTCGGTGGTATGGTGTGGAACAAGACCAAGATTTTGTTTATCTTGCTTTGGAACGCTGCATTTGCAGCTTGAGTGACCTTATTCAGATTTATGCTGACACTTCAGAAAATGCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E348691" ref_strand="+" ref_description="SGN-E348691 [cTOF-30-D10]">
      <seq>ttatgaagagtattgatgagtatattagttcaactccacaaatagctgaggacggcggaattgttctgggttctaaaagaactactgcatttcttattgatgctaagactggacgattgatttacacatatagtatgcctagctctccagcaactcaggacaacgacactgcttttcatcataatggcaccattgaggaaaagagtcttcccagctacacgctttacatcaccaggacagactatgcattaacgtcctttattccaaactcagacaaagtgttgtggaacatgacggttgctgaaataggggctgctgctctttgcaaagttgatgatgcattaagtggggatattatggagtctgacaaatctgaacctgatgtccatttcaatatgccattgccatgtcagtcaagggcccttatctacagacgccgaggtcatgataacaagatgctcccagaggcagataatcacggtatgctgccaattcctacttcacaaccaaatgttgataatgcagctacgcccgtgcccgacaagaatgtaaacaccttccacttaaaagatattattaaaaaaactatgcnttgtcatattgacggtgttcataatttttttcaccaaaaacataatgttacaagatgctaaaagtccatttaaaaaaggaatatcaaagtgctctgaaagattgaccatgccaattcacagtattttagctactcttgtgggagcttttacacatatcgtgatttagtagctgaactcaatgggaacct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="-" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="88092" stop="86712"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="87792" g_stop="87012" g_length="781"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="781" r_length="781" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="-" ref_id="SGN-E348691" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>781</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E348691" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="87792" e_stop="87012"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTATGAAGAGTATTGATGAGTATATTAGTTCAACTCCACAAATAGCTGAGGACGGCGGAATTGTTCTGGGTTCTAAAAGAACTACTGCATTTCTTATTGATGCTAAGACTGGACGATTGATTTACACATATAGTATGCCTAGCTCTCCAGCAACTCAGGACAACGACACTGCTTTTCATCATAATGGCACCATTGAGGAAAAGAGTCTTCCCAGCTACACGCTTTACATCACCAGGACAGACTATGCATTAACGTCCTTTATTCCAAACTCAGACAAAGTGTTGTGGAACATGACGGTTGCTGAAATAGGGGCTGCTGCTCTTTGCAAAGTTGATGATGCATTAAGTGGGGATATTATGGAGTCTGACAAATCTGAACCTGATGTCCATTTCAATATGCCATTGCCATGTCAGTCAAGGGCCCTTATCTACAGACGCCGAGGTCATGATAACAAGATGCTCCCAGAGGCAGATAATCACGGTATGCTGCCAATTCCTACTTCACAACCAAATGTTGATAATGCAGCTACGCCCGTGCCCGACAAGAATGTAAACACCTTCCACTTAAAAGATATTATTAAAAAAACTATGC-TTGTCATATTGACGGTGTTCATAATTTTTTTCACCAAAAACATAATGTTACAAGATGCTAAAAGTCCATTTAAAAAAGGAATATCAAAGTGCTCTGAAAGATTGACCATGCCAATTCACAGTATTTTAGCTACTCTTGTGGGAGCTTTTACACATAATCGTGATTTAGTAGCTGAACTCAATGGGAACCT</genome_strand>
        <mrna_strand>TTATGAAGAGTATTGATGAGTATATTAGTTCAACTCCACAAATAGCTGAGGACGGCGGAATTGTTCTGGGTTCTAAAAGAACTACTGCATTTCTTATTGATGCTAAGACTGGACGATTGATTTACACATATAGTATGCCTAGCTCTCCAGCAACTCAGGACAACGACACTGCTTTTCATCATAATGGCACCATTGAGGAAAAGAGTCTTCCCAGCTACACGCTTTACATCACCAGGACAGACTATGCATTAACGTCCTTTATTCCAAACTCAGACAAAGTGTTGTGGAACATGACGGTTGCTGAAATAGGGGCTGCTGCTCTTTGCAAAGTTGATGATGCATTAAGTGGGGATATTATGGAGTCTGACAAATCTGAACCTGATGTCCATTTCAATATGCCATTGCCATGTCAGTCAAGGGCCCTTATCTACAGACGCCGAGGTCATGATAACAAGATGCTCCCAGAGGCAGATAATCACGGTATGCTGCCAATTCCTACTTCACAACCAAATGTTGATAATGCAGCTACGCCCGTGCCCGACAAGAATGTAAACACCTTCCACTTAAAAGATATTATTAAAAAAACTATGCNTTGTCATATTGACGGTGTTCATAATTTTTTTCACCAAAAACATAATGTTACAAGATGCTAAAAGTCCATTTAAAAAAGGAATATCAAAGTGCTCTGAAAGATTGACCATGCCAATTCACAGTATTTTAGCTACTCTTGTGGGAGCTTTTACACAT-ATCGTGATTTAGTAGCTGAACTCAATGGGAACCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E212326" ref_strand="+" ref_description="SGN-E212326 [cLEC-74-G19]">
      <seq>atcgatcgacgaaattcgaggaacctaaaatccagacgacaacgccctttctttcatatttcgaatcgaatctctaagatttcctcaattgcaatcttcgatgtaacccataactctatcgtacgccaccactcctaatttatttgtatacccccacccccatcaacagaagaaaaatcggcggtcaatttcaggtcgatgagacgctactgggtgattccggccggcattttactcttatttttcagcttgacggttttggcaagtgagttatttggcttaccaagtgggtcaattgaaggagtttctgatggggttacgctagctccggcgaggaggaatttgctgtctgaattaaagctcctgttaattacaataacagcaaggaggcatcatctgatataggaagtggttatttcatcgactgtggccgtggggatgattgggagttgtatgcacacaacaggcttggtaaattggtattgtctctaaattttatgcgagtctcttctgtacaatacaacgagaaatgatatccacttaacattgattgataatgaggaatggtaccattctttttcgagaaaggaacaggaaaaggtttcacacaatgaatcatgatgccaattaatcttgtattatcaactagatatccatctatctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="-" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="90559" stop="88181"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90259" g_stop="89901" g_length="359"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="359" r_length="359" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="89900" i_stop="88787" i_length="1114">
            <donor d_prob="0.989" d_score="0.98"/>
            <acceptor a_prob="0.859" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="88786" g_stop="88481" g_length="306"/>
          <reference_exon_boundary r_type="cDNA" r_start="360" r_stop="664" r_length="305" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="-" ref_id="SGN-E212326" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>665</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E212326" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90259" e_stop="89901"/>
          <exon e_start="88786" e_stop="88481"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCGATCGACGAAATTCGAGGAACCCAAAATCCAGACGACAACGCCCTTTCTTTCATATTTCGAATCGAATCTCTAAGATTTCCTCAATTGCAATCTTCGATGTAACCCATAACTCTATCGTACGCCACCACTCCTAATTTATTTGTATACCCCCACCCCCATCAACAGAAGAAAAATCGGCGGTCAATTTCAGGTCGATGAGACGCTACTGGGTGATTCCGGCCGGCATTTTACTCTTATTTTTCAGCTTGACGGTTTTGGCAAGTGAGTTATTTGGCTTACCAAGTGGGTCAATTGAAGGAGTTTCTGATGGGGTTACGCTAGCTCCGGCGAGGAGGAATTTGCTGTCGGAATTAAAGTTAGTTTGTTTTCTTGATTTCTTGATTTCTTGAGAGTTTTTAACTTATACCCATTTGAGTTCATTGCTGGTTTGGTTGGTTTTTAAAAGTAATTTGTACAAAGATTTATTATTGCTTTTCAAGATTCTTGTTGGTCATTTTCTACTAATGCAGATTTTGATCTTTTGGTTCAAATTGTTTACTGCAGTTGTTTTTTCCCGTGTTTTTTTTATGGTTTTTGACTCTAAAGAATTGAATCATGTTCAATATGTACAAATTGTACACTTAGATTTGTCTGTATAAGACTTGTTTTTGACTAACTGTCAGTCAAGATTGTCTTTAGTTCGTGTTTTATTCAAACAGATATGTCATTGCCGTTTCCTTATAATTGGTAAAGATTCTTATGCTCTTTTTTTGGGCCATCAGGAAATTGTATGTTTGTTTATCCTGCCTTTCTTTGCTTCATATTGCTCTATGTCGAAACCATGCCAAGTTTCCAAACTACACCTTAATAGTTTCCAGGATTTCTAGTTTTTGAAGTACAACATTCTCTTAGAGGAGATCAGTTTCTATAAACACCAGAATACTTTTCGGTTACTAGTTTGTCGTACCCTGTAGTTTACAATATAAATATGTGGGAAAATAGTGTTTTTATGAGTGAGGGTAGTGGGATCTTCTGAGACTCAGTTAATATGGATCATATGTTTCGCTGCATGAAATGCTTCATGCATCTGTGATTGCTTGAAGTGAAAACATCACTAGCGTTTCTGCTCATCTCTTAAACCCAGAAACACTCTGTTTAATATGTAGGTAAATCAACTTATTTTCTGCAAATTGGATGCATGAGCTGTAAACTAGATTCTCTTTGGAAATGATAAATTGAAGCCCTTTATTTTGTTTGTTCCAAGTTCACTTTGTGTCGTACTGGTAGATGTACTTGTGGGATGCTTGTTGATTCATTAAATTTATTTGGCTTTGGTTTTCGCTACACTCTCTCGAACCAGGAAACCTGAGACAGCTCTGTTTGCTGAATTGGATGGTACAGTTTCTTTGAGGGAGCAAAATAGCTTAAATACTATGAAACCACCGCTCTGGTCATTTAGATCTGGGTCATCAATCTACTCTTCTTATCAGGCTCCTGTTAATTACAATAACAGCAAGGAGGCATCATCTGATATAGGAAGTGGTTATTTCATCGACTGTGGCCGTGGGGATGATTGGGAGTTGTATGCACACAACAGGCTTGGTAAATTGGTATTGTCTCTAAATTTTATGCGAGTCTCTTCTGTACAATACAACGAGAAATGATATCCACTTAACATTGATTGATAATGAGGAATGGTACCATTCTTTTTCGAGAAAGGTAACAGGAAAAGGTTTCACACAATGAATCATGATGCCAATTAATCTTGTATTATCAACTAGATATCCATCTATCTT</genome_strand>
        <mrna_strand>ATCGATCGACGAAATTCGAGGAACCTAAAATCCAGACGACAACGCCCTTTCTTTCATATTTCGAATCGAATCTCTAAGATTTCCTCAATTGCAATCTTCGATGTAACCCATAACTCTATCGTACGCCACCACTCCTAATTTATTTGTATACCCCCACCCCCATCAACAGAAGAAAAATCGGCGGTCAATTTCAGGTCGATGAGACGCTACTGGGTGATTCCGGCCGGCATTTTACTCTTATTTTTCAGCTTGACGGTTTTGGCAAGTGAGTTATTTGGCTTACCAAGTGGGTCAATTGAAGGAGTTTCTGATGGGGTTACGCTAGCTCCGGCGAGGAGGAATTTGCTGTCTGAATTAAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCCTGTTAATTACAATAACAGCAAGGAGGCATCATCTGATATAGGAAGTGGTTATTTCATCGACTGTGGCCGTGGGGATGATTGGGAGTTGTATGCACACAACAGGCTTGGTAAATTGGTATTGTCTCTAAATTTTATGCGAGTCTCTTCTGTACAATACAACGAGAAATGATATCCACTTAACATTGATTGATAATGAGGAATGGTACCATTCTTTTTCGAGAAAGG-AACAGGAAAAGGTTTCACACAATGAATCATGATGCCAATTAATCTTGTATTATCAACTAGATATCCATCTATCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E200929" ref_strand="+" ref_description="SGN-E200929 [cLEC-5-H10]">
      <seq>atcgatcgacgaaattcgaggaacctaaaatccagacgacaacgccctttctttcatatttcgaatcgaatctctaagatttcctcaattgcaatcttcgatgtaacccataactctatcgtacgccaccactcctaatttatttgtatacccccacccccatcaacagaagaaaaatcggcggtcaatttcaggtcgatgagacgctactgggtgattccggccggcattttactcttatttttcagcttgacggttttggcaagtgagttatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="-" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="90559" stop="89685"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90259" g_stop="89985" g_length="275"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="275" r_length="275" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="-" ref_id="SGN-E200929" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>275</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E200929" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90259" e_stop="89985"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCGATCGACGAAATTCGAGGAACCCAAAATCCAGACGACAACGCCCTTTCTTTCATATTTCGAATCGAATCTCTAAGATTTCCTCAATTGCAATCTTCGATGTAACCCATAACTCTATCGTACGCCACCACTCCTAATTTATTTGTATACCCCCACCCCCATCAACAGAAGAAAAATCGGCGGTCAATTTCAGGTCGATGAGACGCTACTGGGTGATTCCGGCCGGCATTTTACTCTTATTTTTCAGCTTGACGGTTTTGGCAAGTGAGTTATT</genome_strand>
        <mrna_strand>ATCGATCGACGAAATTCGAGGAACCTAAAATCCAGACGACAACGCCCTTTCTTTCATATTTCGAATCGAATCTCTAAGATTTCCTCAATTGCAATCTTCGATGTAACCCATAACTCTATCGTACGCCACCACTCCTAATTTATTTGTATACCCCCACCCCCATCAACAGAAGAAAAATCGGCGGTCAATTTCAGGTCGATGAGACGCTACTGGGTGATTCCGGCCGGCATTTTACTCTTATTTTTCAGCTTGACGGTTTTGGCAAGTGAGTTATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E268696" ref_strand="+" ref_description="SGN-E268696 [cLEM-9-K23]">
      <seq>caatgaggcgaagaaagacagacagccatcgatcgacgaaattcgaagaacccaatatccaaacgacaacgccctttctttcatatttcgaatcgaatctctaagatttcctcaattgcaatcttcgatgtaacccataactctatcgtacgccaccactcctaatttattttgtatacccccacccccatcaacagaagaaaaatcggcggttaaattcacgtcgatgagacgctactgggtgattccggccggcattttactct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="-" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="90586" stop="89722"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90286" g_stop="90022" g_length="265"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="266" r_length="266" r_score="0.966"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="-" ref_id="SGN-E268696" ref_strand="+">
        <total_alignment_score>0.966</total_alignment_score>
        <cumulative_length_of_scored_exons>265</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E268696" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90286" e_stop="90022"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAATGAGGCAAAGAAAGACAGACAGCCATCGATCGACGAAATTCGAGGAACCCAAAATCCAGACGACAACGCCCTTTCTTTCATATTTCGAATCGAATCTCTAAGATTTCCTCAATTGCAATCTTCGATGTAACCCATAACTCTATCGTACGCCACCACTCCTAATTTA-TTTGTATACCCCCACCCCCATCAACAGAAGAAAAATCGGCGGTCAATTTCAGGTCGATGAGACGCTACTGGGTGATTCCGGCCGGCATTTTACTCT</genome_strand>
        <mrna_strand>CAATGAGGCGAAGAAAGACAGACAGCCATCGATCGACGAAATTCGAAGAACCCAATATCCAAACGACAACGCCCTTTCTTTCATATTTCGAATCGAATCTCTAAGATTTCCTCAATTGCAATCTTCGATGTAACCCATAACTCTATCGTACGCCACCACTCCTAATTTATTTTGTATACCCCCACCCCCATCAACAGAAGAAAAATCGGCGGTTAAATTCACGTCGATGAGACGCTACTGGGTGATTCCGGCCGGCATTTTACTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E245530" ref_strand="+" ref_description="SGN-E245530 [cLEF-43-F22]">
      <seq>ttcaacaccaaacgcacttgagcataaactcctgtatccataaaccctaaatccaaagaatccatagcgatgttgaagaacaaagctttctcgcgtcaaacaagacaaggcagaataattaaggaagttagggaacactatttgagagatgatatttattgtggagccccttattgcaagaatgggtgtaaagtttcatctccttgtttaagcgactctcacttcactattcttgttcttgacaccaacgttgttctcaatcagattgatttgctggagaatcaagctattgacaatgtggtggtgctatccgtggtcttgtcggaggtcaagaacaagaatattgcggtttataacagactcagggctctgtgtagcaattctttaaggaagttctttgtcttttctaacgaaaatcacaaggatacttatgtgaagaccatggcaggtgaaagtccaaatgatcggaacgatagagctattagggttgcagctaaatggtatcaagatcatcttggcagcgcagtaagtgtcttgctaattacgaatga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="+" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="93283" stop="96549"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="93583" g_stop="93705" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="123" r_length="123" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="93706" i_stop="93788" i_length="83">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="93789" g_stop="93929" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="124" r_stop="264" r_length="141" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="93930" i_stop="94021" i_length="92">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="94022" g_stop="94179" g_length="158"/>
          <reference_exon_boundary r_type="cDNA" r_start="265" r_stop="422" r_length="158" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="94180" i_stop="95006" i_length="827">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="95007" g_stop="95062" g_length="56"/>
          <reference_exon_boundary r_type="cDNA" r_start="423" r_stop="478" r_length="56" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="95063" i_stop="96176" i_length="1114">
            <donor d_prob="0.950" d_score="1.00"/>
            <acceptor a_prob="0.890" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="96177" g_stop="96249" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="479" r_stop="551" r_length="73" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="+" ref_id="SGN-E245530" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>551</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E245530" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="93583" e_stop="93705"/>
          <exon e_start="93789" e_stop="93929"/>
          <exon e_start="94022" e_stop="94179"/>
          <exon e_start="95007" e_stop="95062"/>
          <exon e_start="96177" e_stop="96249"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCAACACCAAACGCACTTGAGCATAAACTCCTGTATCCATAAACCCTAAATCCAAAGAATCCATAGCGATGTTGAAGAACAAAGCTTTCTCGCGTCAAACAAGACAAGGCAGAATAATTAAGGTTTAACGATTAGAATTATGTTTATGTATTTGTTTACTTTTTTGTTTTCTTAAATTTTAATTGGAGTTTTTTTTTTCTTTCAGGAAGTTAGGGAACACTATTTGAGAGATGATATTTATTGTGGAGCCCCTTATTGCAAGAATGGGTGTAAAGTTTCATCTCCTTGTTTAAGCGACTCTCACTTCACTATTCTTGTTCTTGACACCAACGTTGTTCTCAATCAGGTGAATATACTTTGGAATATTGGATTCTGTTAACTTTCTTGTTTGTTCGTTCGGTTGGGTTTAGTTTTTTTTGAAATCTTGAATTGTGTTAGATTGATTTGCTGGAGAATCAAGCTATTGACAATGTGGTGGTGCTATCCGTGGTCTTGTCGGAGGTCAAGAACAAGAATATTGCGGTTTATAACAGACTCAGGGCTCTGTGTAGCAATTCTTTAAGGAAGTTCTTTGTCTTTTCTAACGAAAATCACAAGTATGTTCCTTTCTTTCTGCCCTTTTGTACCTCTAGTTGTTCTTCTATAAATTTCACTTGCCTTTTGATCAAAAGCAACCATTGCTTATTGTGGAAGTTTGTCAGTGTTGATTAGTCATTAATTCATTCTCAAAATATTGCTTTTCCTTTGCTTAGCTATTAATTACATCATTCTGGGTGAGGGCAGGGTGCAGGAACTATTGACTTTGAGTGCTAGGGTTTGGTCAATGTTTTAGTAATATTTTTCATTTGATCCACTTAAACCACTCTGTGTCTTTTGTATTTTTGGGATAGTGGTCCATGTAATTGTATGTCCAGGACTAGTTCTCTATGAATGAGTGTTCCAATTGCTAAAAGCTCTTTGGTCTAAGCTCATAAGATAATAGCTAAAGTCACATTGCATTAGCAGCGTCCTGGATAGTATGGTGGTTATCACATATGTGGCACTTGCTGAAAACTCTTTGGTCAAAGCTCACAAGGTATATAGCTAAGTTACATTGCATTGACATCGGCTAGGATAGTATGGTGGTTATCACCTTACACTTGTTGATTACTTGGATTCTTGGTCTGGGTCCCTTTTCATTCATAATGGTTGCAAGGGTTGCTTATCTGTAGAGACTTCCTTTCCTGGCTTCAGTAATGACACAGAAAAATATTTTAGTATTTATTTATCTTTTGATAAGAAAGAAAAAGATTGTAGCATATCGTTATATATTTGCATTTTGACTGATCCACTTATACGATACAACCACTACTAGACATCGATTGCTACTTCACAGCCAGGGCTGAAATATGATTGAAAATTCCTTCTTCTGCTCATTGTTCAGGGATACTTATGTGAAGACCATGGCAGGTGAAAGTCCAAATGATCGGAACGATAGAGGTTTGTTTGTTCACCTTTGTGCAGTAGCAATTGAAGTTGTAAATCATTGCTTTTCTTGAACAATTTGTGCTATGCATTTTTGCGTATCCATTCACTAGTTTTCTGGGCCTTCTGTTTTAATTTCATCAAGTCCTAAGGTATGTGCTTGTGTTAGGTGAATTAAAGGTCATACTTAGAGTACATGTTTATTATGTGCATACAGATTATGCTAAAAACATGCATTAGAGTTCATACTTATGTGTTTGATCAGTAAGAAAGGATAACTGTATAGTTATACTTTCATGCTTGATGAGAAATGGACTAGTCAATAACCTATATTGAGGAACTATGCCTTTGTTTTATATCTACACACTATTTTAAATAGTGAAGGGGTTTGGAAGAATGCATTGCACTATAACCAAGTTACTTAGGGGTCATTTGATCAATAATATCCCTAGATTTTAAGCAGCAGTGTAGAGTATCTGATTGATAATCTGAACTTGTGAGAAAGTTTTGCTCCTGCGAAATACAAAGTGAAAAATAGAGTGCTGGACTTTATTCCTTTGCAGTTTCATAATGTGATTGAATAGTTAGGGCTTTATAAGTTTTAACTTCACTAAATTTGGGGAAAATCAATTGCAAGAGAACTTAAGGTAACCTGTCTATTTCTCCCATGGACTCACGCCGTTGATGCATTAGGTTCTTAGGTGCACTGAGGAGTGAAGCGCTTCAATCTTGAGGTTATCATTTTGTGGAGTATTCTAGACGATGTCAGGACGAGAACCTTTGAATTAACATTTAGGGTAACTTTTGCTTTTCTGATATTTATCCAAGTATAACTAATGCAAGTATTTTTATTCCACCACCTATCTAGGATAAAATACTACATAGATTATTGATCTCTACTAAGGCTCCAAGATCTCTTAAATATGATTATCTGAGTGCAGAACTCTAAGTAAGTTGAGCTATCACGTTTAGTAGTCAAGAAGTGGAATGGGAAAGGTTAACATGATTTGTGGAGGTATAATCGAGAATCATGGTCGTCTATCTCTAATAGGTCTTTACATCTATACTTGATACTTTCGTTCGTAATCACCAGTTGGTTGACAAACTTCAACAATTTTTGGTGGTTCAGCTATTAGGGTTGCAGCTAAATGGTATCAAGATCATCTTGGCAGCGCAGTAAGTGTCTTGCTAATTACGAATGA</genome_strand>
        <mrna_strand>TTCAACACCAAACGCACTTGAGCATAAACTCCTGTATCCATAAACCCTAAATCCAAAGAATCCATAGCGATGTTGAAGAACAAAGCTTTCTCGCGTCAAACAAGACAAGGCAGAATAATTAAG...................................................................................GAAGTTAGGGAACACTATTTGAGAGATGATATTTATTGTGGAGCCCCTTATTGCAAGAATGGGTGTAAAGTTTCATCTCCTTGTTTAAGCGACTCTCACTTCACTATTCTTGTTCTTGACACCAACGTTGTTCTCAATCAG............................................................................................ATTGATTTGCTGGAGAATCAAGCTATTGACAATGTGGTGGTGCTATCCGTGGTCTTGTCGGAGGTCAAGAACAAGAATATTGCGGTTTATAACAGACTCAGGGCTCTGTGTAGCAATTCTTTAAGGAAGTTCTTTGTCTTTTCTAACGAAAATCACAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATACTTATGTGAAGACCATGGCAGGTGAAAGTCCAAATGATCGGAACGATAGAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATTAGGGTTGCAGCTAAATGGTATCAAGATCATCTTGGCAGCGCAGTAAGTGTCTTGCTAATTACGAATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E739915" ref_strand="+" ref_description="SGN-E739915 [LC19BD02]">
      <seq>cgcacttgagcataaactcctgtatccataaaccctaaatccaaagaatccatagcgatgttgaagaacaaagctttctcgcgtcaaacaagacaaggcagaataattaaggaagttagggaacactatttgagagatgatatttattgtggagccccttattgcaagaatgggtgtaaagtttcatctccttgtttaagcgactctcacttcactattcttgttcttgacaccaacgttgttctcaatcagattgatttgctggagaatcaagctattgacaatgtggtggtgctatccgtggtcttgtcggaggtcaagaacaagaatattgcggtttataacagactcagggctctgtgtagcaattctttaaggaagttctttgtcttttctaacgaaaatcacaaggatacttatgtgaagaccatggcaggtgaaagtccaaatgatcggaacgatagagctattagggttgcagctaaatggtatcaagatcatcttggcagcgcagtaagtgtcttgctaattacgaatgatagagagaataagaagaaggcaattgaagagggaatttctgcagagacagttgagtgctatgtaaagtcacttggtcagccagaattgcttgacctaatagtacagcctccttctgaagatgttaaaatggatgatgttgaggatttaaggccttcaaagcgaaaagtcatttataacgagcataagcccatgtcagaaattacttctggcttgcttcggggactccttcaccaggggaaacttcgtgttaaccgttttaatccatttgaagcatatgtcggaagtgaaagcattggtgatgagataattatatatggacgtgca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="+" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="93295" stop="97176"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="93595" g_stop="93705" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="111" r_length="111" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="93706" i_stop="93788" i_length="83">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="93789" g_stop="93929" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="112" r_stop="252" r_length="141" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="93930" i_stop="94021" i_length="92">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="94022" g_stop="94179" g_length="158"/>
          <reference_exon_boundary r_type="cDNA" r_start="253" r_stop="410" r_length="158" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="94180" i_stop="95006" i_length="827">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="95007" g_stop="95062" g_length="56"/>
          <reference_exon_boundary r_type="cDNA" r_start="411" r_stop="466" r_length="56" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="95063" i_stop="96176" i_length="1114">
            <donor d_prob="0.950" d_score="1.00"/>
            <acceptor a_prob="0.890" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="96177" g_stop="96299" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="467" r_stop="589" r_length="123" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="96300" i_stop="96501" i_length="202">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.498" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="96502" g_stop="96632" g_length="131"/>
          <reference_exon_boundary r_type="cDNA" r_start="590" r_stop="720" r_length="131" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="96633" i_stop="96732" i_length="100">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.921" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="96733" g_stop="96876" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="721" r_stop="864" r_length="144" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="+" ref_id="SGN-E739915" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>864</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E739915" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="93595" e_stop="93705"/>
          <exon e_start="93789" e_stop="93929"/>
          <exon e_start="94022" e_stop="94179"/>
          <exon e_start="95007" e_stop="95062"/>
          <exon e_start="96177" e_stop="96299"/>
          <exon e_start="96502" e_stop="96632"/>
          <exon e_start="96733" e_stop="96876"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGCACTTGAGCATAAACTCCTGTATCCATAAACCCTAAATCCAAAGAATCCATAGCGATGTTGAAGAACAAAGCTTTCTCGCGTCAAACAAGACAAGGCAGAATAATTAAGGTTTAACGATTAGAATTATGTTTATGTATTTGTTTACTTTTTTGTTTTCTTAAATTTTAATTGGAGTTTTTTTTTTCTTTCAGGAAGTTAGGGAACACTATTTGAGAGATGATATTTATTGTGGAGCCCCTTATTGCAAGAATGGGTGTAAAGTTTCATCTCCTTGTTTAAGCGACTCTCACTTCACTATTCTTGTTCTTGACACCAACGTTGTTCTCAATCAGGTGAATATACTTTGGAATATTGGATTCTGTTAACTTTCTTGTTTGTTCGTTCGGTTGGGTTTAGTTTTTTTTGAAATCTTGAATTGTGTTAGATTGATTTGCTGGAGAATCAAGCTATTGACAATGTGGTGGTGCTATCCGTGGTCTTGTCGGAGGTCAAGAACAAGAATATTGCGGTTTATAACAGACTCAGGGCTCTGTGTAGCAATTCTTTAAGGAAGTTCTTTGTCTTTTCTAACGAAAATCACAAGTATGTTCCTTTCTTTCTGCCCTTTTGTACCTCTAGTTGTTCTTCTATAAATTTCACTTGCCTTTTGATCAAAAGCAACCATTGCTTATTGTGGAAGTTTGTCAGTGTTGATTAGTCATTAATTCATTCTCAAAATATTGCTTTTCCTTTGCTTAGCTATTAATTACATCATTCTGGGTGAGGGCAGGGTGCAGGAACTATTGACTTTGAGTGCTAGGGTTTGGTCAATGTTTTAGTAATATTTTTCATTTGATCCACTTAAACCACTCTGTGTCTTTTGTATTTTTGGGATAGTGGTCCATGTAATTGTATGTCCAGGACTAGTTCTCTATGAATGAGTGTTCCAATTGCTAAAAGCTCTTTGGTCTAAGCTCATAAGATAATAGCTAAAGTCACATTGCATTAGCAGCGTCCTGGATAGTATGGTGGTTATCACATATGTGGCACTTGCTGAAAACTCTTTGGTCAAAGCTCACAAGGTATATAGCTAAGTTACATTGCATTGACATCGGCTAGGATAGTATGGTGGTTATCACCTTACACTTGTTGATTACTTGGATTCTTGGTCTGGGTCCCTTTTCATTCATAATGGTTGCAAGGGTTGCTTATCTGTAGAGACTTCCTTTCCTGGCTTCAGTAATGACACAGAAAAATATTTTAGTATTTATTTATCTTTTGATAAGAAAGAAAAAGATTGTAGCATATCGTTATATATTTGCATTTTGACTGATCCACTTATACGATACAACCACTACTAGACATCGATTGCTACTTCACAGCCAGGGCTGAAATATGATTGAAAATTCCTTCTTCTGCTCATTGTTCAGGGATACTTATGTGAAGACCATGGCAGGTGAAAGTCCAAATGATCGGAACGATAGAGGTTTGTTTGTTCACCTTTGTGCAGTAGCAATTGAAGTTGTAAATCATTGCTTTTCTTGAACAATTTGTGCTATGCATTTTTGCGTATCCATTCACTAGTTTTCTGGGCCTTCTGTTTTAATTTCATCAAGTCCTAAGGTATGTGCTTGTGTTAGGTGAATTAAAGGTCATACTTAGAGTACATGTTTATTATGTGCATACAGATTATGCTAAAAACATGCATTAGAGTTCATACTTATGTGTTTGATCAGTAAGAAAGGATAACTGTATAGTTATACTTTCATGCTTGATGAGAAATGGACTAGTCAATAACCTATATTGAGGAACTATGCCTTTGTTTTATATCTACACACTATTTTAAATAGTGAAGGGGTTTGGAAGAATGCATTGCACTATAACCAAGTTACTTAGGGGTCATTTGATCAATAATATCCCTAGATTTTAAGCAGCAGTGTAGAGTATCTGATTGATAATCTGAACTTGTGAGAAAGTTTTGCTCCTGCGAAATACAAAGTGAAAAATAGAGTGCTGGACTTTATTCCTTTGCAGTTTCATAATGTGATTGAATAGTTAGGGCTTTATAAGTTTTAACTTCACTAAATTTGGGGAAAATCAATTGCAAGAGAACTTAAGGTAACCTGTCTATTTCTCCCATGGACTCACGCCGTTGATGCATTAGGTTCTTAGGTGCACTGAGGAGTGAAGCGCTTCAATCTTGAGGTTATCATTTTGTGGAGTATTCTAGACGATGTCAGGACGAGAACCTTTGAATTAACATTTAGGGTAACTTTTGCTTTTCTGATATTTATCCAAGTATAACTAATGCAAGTATTTTTATTCCACCACCTATCTAGGATAAAATACTACATAGATTATTGATCTCTACTAAGGCTCCAAGATCTCTTAAATATGATTATCTGAGTGCAGAACTCTAAGTAAGTTGAGCTATCACGTTTAGTAGTCAAGAAGTGGAATGGGAAAGGTTAACATGATTTGTGGAGGTATAATCGAGAATCATGGTCGTCTATCTCTAATAGGTCTTTACATCTATACTTGATACTTTCGTTCGTAATCACCAGTTGGTTGACAAACTTCAACAATTTTTGGTGGTTCAGCTATTAGGGTTGCAGCTAAATGGTATCAAGATCATCTTGGCAGCGCAGTAAGTGTCTTGCTAATTACGAATGATAGAGAGAATAAGAAGAAGGCAATTGAAGAGGGAATTTCTGCAGAGACAGGTAAATCTCTCTTCTTGTTGTCTGATGACAATCATTGAGTAGTATGTTACTGTGGTGTCCTGATTTGACCACTGAGAGGCTTCTGTTAATGTTCACAAAAGTTCCCTTTTGTCGTTATTATGTATAGAGTTGTTTTCTTTATTTCCTGCTTAGTTAAATTTATCTTCAGCAATCTTGACCAACTGACTTCCGTTGATCTCAGTTGAGTGCTATGTAAAGTCACTTGGTCAGCCAGAATTGCTTGACCTAATAGTACAGCCTCCTTCTGAAGATGTTAAAATGGATGATGTTGAGGATTTAAGGCCTTCAAAGCGAAAAGTCATTTATAACGAGGTATATTTAACTGCTTACTACAGTTCATCTAGGGATCTTTAGGTGTTGTTTTTAAGGCTATGACCTGCTAAACTACACCTGTTGTTCATGTTTTCTATAGCATAAGCCCATGTCAGAAATTACTTCTGGCTTGCTTCGGGGACTCCTTCACCAGGGGAAACTTCGTGTTAACCGTTTTAATCCATTTGAAGCATATGTCGGAAGTGAAAGCATTGGTGATGAGATAATTATATATGGACGTGCA</genome_strand>
        <mrna_strand>CGCACTTGAGCATAAACTCCTGTATCCATAAACCCTAAATCCAAAGAATCCATAGCGATGTTGAAGAACAAAGCTTTCTCGCGTCAAACAAGACAAGGCAGAATAATTAAG...................................................................................GAAGTTAGGGAACACTATTTGAGAGATGATATTTATTGTGGAGCCCCTTATTGCAAGAATGGGTGTAAAGTTTCATCTCCTTGTTTAAGCGACTCTCACTTCACTATTCTTGTTCTTGACACCAACGTTGTTCTCAATCAG............................................................................................ATTGATTTGCTGGAGAATCAAGCTATTGACAATGTGGTGGTGCTATCCGTGGTCTTGTCGGAGGTCAAGAACAAGAATATTGCGGTTTATAACAGACTCAGGGCTCTGTGTAGCAATTCTTTAAGGAAGTTCTTTGTCTTTTCTAACGAAAATCACAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATACTTATGTGAAGACCATGGCAGGTGAAAGTCCAAATGATCGGAACGATAGAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATTAGGGTTGCAGCTAAATGGTATCAAGATCATCTTGGCAGCGCAGTAAGTGTCTTGCTAATTACGAATGATAGAGAGAATAAGAAGAAGGCAATTGAAGAGGGAATTTCTGCAGAGACAG..........................................................................................................................................................................................................TTGAGTGCTATGTAAAGTCACTTGGTCAGCCAGAATTGCTTGACCTAATAGTACAGCCTCCTTCTGAAGATGTTAAAATGGATGATGTTGAGGATTTAAGGCCTTCAAAGCGAAAAGTCATTTATAACGAG....................................................................................................CATAAGCCCATGTCAGAAATTACTTCTGGCTTGCTTCGGGGACTCCTTCACCAGGGGAAACTTCGTGTTAACCGTTTTAATCCATTTGAAGCATATGTCGGAAGTGAAAGCATTGGTGATGAGATAATTATATATGGACGTGCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E575316" ref_strand="+" ref_description="SGN-E575316 [34921]">
      <seq>cagccagaattgcttgacctaatagtacagcctccttctgaagatgttaatatggctgatgttgaggatttgaggccttcaaagcgaaaagtcatttataatgagcataagcccatgtcagaaattacttctggcttgcttcgtggactccttcaccagggggaaacttcgcgttaaccgttttaatccatttgaagcatatgttggaagtgaaagcattggtgatgagataattatatatggacgtgcaaacatgaatagggcttttgatggtgatatagtggcagttgagcttttgcctccagaacagtggcacgaggagaagtctttggcattagctgatgaagacgatgaagaagaagatgtccatttagctccaaacactgctgatgatgctcctagagtcctgaatcaagggcaaactgcacctgaggaaatgaaaccttctcgtccaactggatgtgttgttggtatcataaagcggaactggcactcttactgtggatccttggagccaatgcctatgccagctggtgatggtggtcgtgcccatgccttattcgtatccaaagaccgcaggattccaaagatacggatacaaactcgtcaatcgggaaatttgctggataaacggattatcgttgcggttgattcatgggatcgttgtctcgatatccaaacggtcactatgtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="+" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="96228" stop="101992"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="96528" g_stop="96632" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="105" r_length="105" r_score="0.962"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="96633" i_stop="96732" i_length="100">
            <donor d_prob="0.998" d_score="0.94"/>
            <acceptor a_prob="0.921" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="96733" g_stop="96973" g_length="241"/>
          <reference_exon_boundary r_type="cDNA" r_start="106" r_stop="347" r_length="242" r_score="0.967"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="96974" i_stop="100136" i_length="3163">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.964" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="100137" g_stop="100284" g_length="148"/>
          <reference_exon_boundary r_type="cDNA" r_start="348" r_stop="495" r_length="148" r_score="0.973"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="100285" i_stop="101493" i_length="1209">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="101494" g_stop="101692" g_length="199"/>
          <reference_exon_boundary r_type="cDNA" r_start="496" r_stop="693" r_length="198" r_score="0.950"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="+" ref_id="SGN-E575316" ref_strand="+">
        <total_alignment_score>0.962</total_alignment_score>
        <cumulative_length_of_scored_exons>693</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E575316" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="96528" e_stop="96632"/>
          <exon e_start="96733" e_stop="96973"/>
          <exon e_start="100137" e_stop="100284"/>
          <exon e_start="101494" e_stop="101692"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGCCAGAATTGCTTGACCTAATAGTACAGCCTCCTTCTGAAGATGTTAAAATGGATGATGTTGAGGATTTAAGGCCTTCAAAGCGAAAAGTCATTTATAACGAGGTATATTTAACTGCTTACTACAGTTCATCTAGGGATCTTTAGGTGTTGTTTTTAAGGCTATGACCTGCTAAACTACACCTGTTGTTCATGTTTTCTATAGCATAAGCCCATGTCAGAAATTACTTCTGGCTTGCTTCGGGGACTCCTTCACCA-GGGGAAACTTCGTGTTAACCGTTTTAATCCATTTGAAGCATATGTCGGAAGTGAAAGCATTGGTGATGAGATAATTATATATGGACGTGCAAACATGAATAGAGCTTTTGACGGTGATATAGTGGCAGTTGAGCTTTTGCCTCCAGAACAGTGGCACGAGGAGAAGTCTTTGGCATTAGCCGATGAAGGTTTGTCCACTTCTTTTTTTCTTCAATGAACATGGCTTTATTGCAAAAATGATCTAATTTGCTTTTGAACTATGCGAAACGGTCTACATTTATCCTCTATTTACAGTTGGGTCATCAAATAACTAAAAATGATTTAAGAGTAATTAGTATCTGATCAAACTAATAAGCATTATCATTTGCCACGTATATAATACGTGGCAAATGTTGCTCGGTATGGCACCTCAGGTGGGTCTCTGAGATTTTTGGAGAAGATCCATTTCTTGGCCTTTCTTCTCTGTCTCATAGGCAAGCTGATGCTTGCAGCCATGCTGAGTTTCAAAGCTTTTGAGCTAATTGTGTTTTGGTGTTGCAAATTCAATTTTTTTGTCACTAAACCACCCTTTTGGTGAAACTACACAACCTTATACTATTCTTGTTCTTATTACTCTCTCTGGTATAACTCGAAAAAGCAATCAAACATGTTCTCTTTTGAGGTGAAAAACTGTGCTTGACATGACACCTCAGGTTGGTCTATGAGATTTAGGAGAAAATTCCACTTTTCATGGTGTCTCTTCTATGTTTGATAATGCCAATTGATGCCTACAGCCATGACAGACCTCAAATCTTTTGAGCTGATTCGTGTTTTTGCTTGGCAATGTTCAGGTCCCCCCCCCCCCCCCATCCCCACCCCAATCCACTATTTTTGTAAAATTACACATGGCCTTCCTCTTTTCTTGTTATTTATATCACTGTCTGCTCCTTTTTATAAACCATGAGGATGTGGAGGTTTTGTCTTCCGCGGAGGTTCAATTAAACTTGATTTCTCTTGAGTTGAAAAACTGTTGATTGGCACTGCACCTCAGGTAGGTCTATTTTTTTTTGAAATAGGTAACTTTGTATTCACACAAAAGAGTTATTCAAGGAATTGATGTGGAGGGATTTAAAAACCCCCAGGGGGTGCCATCATTCACAAATCCAAAAAATTTCAAAAAATTTACAGTTGGCCTATAACCTCCAGTAAACTATCTACTTCCCCCACTAAATCTTGCTTACACCAAAAAAACAAAAGGCTAAGACATCTCATCTTAATCATCTGGGAACTGCTAGTCCTCCCTTCAAAGCACCTTTCTTTCCTTTCTTTCCAGAGTGTCCACCATGCAAGCAGGTACATTTTTTCACCAATCTTCCTTTGACCCTCTCTTCCCGATTCCTTGCCATTGTGTTAGTACCTCAAAAGTGGTTCTGGGCATTGTCTTATCAACCTCGAGCATACAAATGAACAAGTTCCACAGATCTGTAGCCATCCTACAATGCAAAAATAAATGGCCATCGTCTTGTTCACACATATAGCACCTCGAGCAGATCTGTATTCCTCTTCTTTGTAACACTTCGTGGGTTAGACAAGCTCTTCTAATTACCAACCAAGTGAAGCAAGCGACATTTAAAGGGATCTTAATCTTCCATATTAATTTCCAGGGCCAAACTGTTGTCAAAAAATGGTTGATGTTCCTTTACTAGTAACAGGACTTCACTGGAGAAACTCCCCTGCTATGCAATTTCCAAACTGGTTTGTCGGGCTCTGCATTTATGCCAAGAAACGGGTTCAAGGCCTGAAGCAGGTCTGTTACTCTTTCAACCTCCCAATCATTTAGAGCCCTTCTAAACATAAGAGTCCAGCCTTGAGGGCACCTCAAGTAGGTCTATTAGATTTGGAAAATCAATTTCCATTTCTTGGTGTTCTTCTCTGTCTGATATGACTAACTAATGCTTGCAGCCACGACAGATTTTAAAGCGTTTGAGCTTGTTGTGTTTTGGCTTTCAAAGTTCATTGTTTCTCCTCAGCAAACCACTCTCTTGGTGAAATTACACTTTTCTTATTTTTATTTCTGTGCGGTATAATTCAAAATGGCAACCAAACAGATTCTCTCATGAGCTGAAAAACTGTTGGGTCTGTGAGATGTTGGAAAAAGTTCCATTTCTTAGTGTTTCTTCACTATCACATAAGGCTAACTTATGCTTCGGCAAATTCAGTCTTTTTCTCACCAATTCACCCTTTTGACATGACTTTTCTTATTTTTCTTTCTCTCTCTGGTTTAACTCAATATGGCAATCAAACATGTTCTCTCTTGAACTAAAAAACTATTGTTGCTTTCTGCTCCTTGCAGCCATCGTGGACTAGCCCATTTTTCTGATATTCTTTTTAACAATCTGAGCCTCGTTTCTTTTGAACTTGAAATTCCTTCTATAATTTATCTGCTTTTCACATGGTCTTTAGTGTCAGGAATCCTCTATCATTGTCATTATCCCTTTTTGTTTTATAAATCTGAGAATCTCAATTCATAAGGGTAGTTTATTTGAAAATAAGGGAAGATATAACCTACTTTTGTTATTGCAGGGACATGATTGTCCCAACATTATTAACAGAGGTCATATCTAGACCATTTCTCATGGTTTAGTTGTAAATATGACATGTTTCCCTATTATATTGCAACTCGACTATCTTGATTAAGAAGGAGATCTCTATATTTCACTTTTTATGATATTATTAAAGAATCCTATTTTAAAGGTAACAACTCTATTATTATATCGCTAAAACAAACCTGTTGTGGCCATCTATAATTTATTTGATGAAGCAAGTGTTTAATAAGTCACAAAGGCATCAAGGAGATGCATAATTACAGAAGAGGGTGAGATATCAGCTCATAAAAAGATATCAAAAACCTAATATAAGTCTATAGAGCTGACAAATCCAAAGGTCTAGCACCAAGATTAAAGAGCTAATAAATTAAAAAAAAGATTCTGCGTTATATACCGGGGTGAGATTAACCCATCTAAAAAGAGTAGTCATTTCCATTTCAGTAGGTTTGACCCACTTCTGATTATTACACACCATTACTTGTACAAATTTTACAAGTTTCGAAAACTTAATTCATTCCATGTTATATTTTTTCTGTAATAGTATATCTTCAAATTTACTCTTCTGGAACTGCTTTATTATCTCTCTAGTGTGATAAGTTACTCAATTATTAATTTATGTTTGTAACTTTCATGCAAATCAAAGTGAATGTGTAAACTTGTCCTTCCGCTCCTGCATGTCTGTCCATCGCGATTGTCCTCACTTGCTCTCATTATGGATGATTTTTTTTGTGCACGTAAATCTCATAACTATTTCGGTATCCTGAAGATGATGAAGAAGAAGATGTTCATTTAGCTCCAAACACTGCTGATGATGCTCCAAGAGCCCTGAATCAAGGGCAAACTGCACCTGAGGAAATGAAACCTTCTCGTCCAACTGGATGTGTTGTTGGTATCATAAAGCGGAACTGGCACTCGTAAGTTATTGTTTGTTATCTGCTGGCTTTATATGTGTTGTTGTTCTTGTCATTCAGTGTGGTTTTTAGCTTAATTTTAAAGTTATTCTTATCTTCTTTTTTTTTTTTAAAAGCACCTCAAAGGATATTTTGAAATGTGCATGCATTACACAATCATGTTTTCAGAAAATTCAAATAGACATTTCAAGTCTATTTCTGAATATACCTTCAAAACAATTTTCCTTTGTTGGTTCTTACCTGAACAAACACTTGGTCCGTCCAAATAGGTCACCAGCTAGCAACACAGTTTTGGTCATTTAACTTTAGGAACCTTTCAGCTACCATGTTTTGGGTCAAACTTGATTTGTCCATGGCATAGTGTTTGATGGTTTATTCTTCATTTTTTCAAATCGTAAGTCTTTCGAATTCTTTTCTTTCCTTGAAATGGATAAAATGTTTTGGGAATTTTTTACTTTAATCAGGTTGAAAAGCCTGCTATTTTTTTTTTCTAACATGATAGATATTTGTAAAAAATGTCTTTGCCTAATGTTACTGATGAGTCACTCAAACTAAAAACTAATGGGACCCCTTCTTTTACACATTTGAACTACATTTTTATACTTTTGCTTCGTTTGAGCCGTCGTCGCTCTAATGCATAAAAAGGGGGCTAGTGCTTTTTCCCTCAAAGTGTTAGAAAAAATTATTTAATTGTCTTTACCATGAATCATCATGCGTTGGTCATTTCCCCCTAAAACATGTAAAAAGAAATTATATAGAGAGTCATACTTTGCTTGTTGTGATTCCATGTTAAAGCATTCACATCTCACCTAAATCTTAAGCTAAGAGCTTACACCCTCCAGTGCCACTTTTCTTCTTCCTGACGACTGTTCTAAGTATTGCTCCTTTATCGGGACAGTTTAGACACTGCTTCTACATAAGGCACCTTTTCAGGTGTTGGTCGTTCCTCTTGAGACTGTTTATTACCTCTTGTGATAGCTTTACGATTAAGTCGGGCCGAGTTCAATTTCCGAAATCATTTGCAAAGTGGCATGTGGATTAGAGAGTCTGCCTCTTTCAATATGTGGAAATCCTGCAAAAGTTATATGGTCGCTGGAGTCTCTGCACTGTCACTGAACTCTCATACTTTAAATTGCTGTATGCCTGTATCTATTTCCACCAGCAAAGTCTTCTTTTATCTGGTATATAATATTGTATGTTTCATCATTGCAGTTACTGTGGATCCTTGGAGCCTATGCCTATGCCAGCTGGTGATGGTGGTCGTGCCCATGCCTTATTTGTATCCAAAGACCGCAGAATTCCGAAGATACGGATACAAACTCGTCAATTGGGAAATTTGCTGGATAAACGGATTATTGTTGCGGTTGATTCATGGGATCGTTTGTCCCGATATCCAACTGGTCACTATGTG</genome_strand>
        <mrna_strand>CAGCCAGAATTGCTTGACCTAATAGTACAGCCTCCTTCTGAAGATGTTAATATGGCTGATGTTGAGGATTTGAGGCCTTCAAAGCGAAAAGTCATTTATAATGAG....................................................................................................CATAAGCCCATGTCAGAAATTACTTCTGGCTTGCTTCGTGGACTCCTTCACCAGGGGGAAACTTCGCGTTAACCGTTTTAATCCATTTGAAGCATATGTTGGAAGTGAAAGCATTGGTGATGAGATAATTATATATGGACGTGCAAACATGAATAGGGCTTTTGATGGTGATATAGTGGCAGTTGAGCTTTTGCCTCCAGAACAGTGGCACGAGGAGAAGTCTTTGGCATTAGCTGATGAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGATGAAGAAGAAGATGTCCATTTAGCTCCAAACACTGCTGATGATGCTCCTAGAGTCCTGAATCAAGGGCAAACTGCACCTGAGGAAATGAAACCTTCTCGTCCAACTGGATGTGTTGTTGGTATCATAAAGCGGAACTGGCACTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACTGTGGATCCTTGGAGCCAATGCCTATGCCAGCTGGTGATGGTGGTCGTGCCCATGCCTTATTCGTATCCAAAGACCGCAGGATTCCAAAGATACGGATACAAACTCGTCAATCGGGAAATTTGCTGGATAAACGGATTATCGTTGCGGTTGATTCATGGGATCG-TTGTCTCGATATCCAAACGGTCACTATGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E549019" ref_strand="+" ref_description="SGN-E549019 [TUS-66-I22]">
      <seq>aaacatgaatagagcttttgacggtgatatagtggcagttgagcttttgcctccagaacagtggcacgaggagaagtctttggcattagccgatgaagatgatgaagaagaagatgttcatttagctccaaacactgctgatgatgctccaagagccctgaatcaagggcaaactgcacctgaggaaatgaaaccttctcgtccaactggatgtgttgttggtatcataaagcggaactggcactcttactgtggatccttggagcctatgcctatgccagctggtgatggtggtcgtgcccatgccttatttgtatccaaagaccgcagaattccgaagatacggatacaaactcgtcaattgggaaatttgctggataaacggattattgttgcggttgattcatgggatcgtttgtcccgatatccaactggtcactatgtgaggactattggtgaaataggtgatagggacaccgaaacagaggtggtactaatagagaatgatatagatgccaggccattttctgcccaagtgttggcgtgcttgccaccattaccttggttggtgtcttctcaagatttgacaaatccgattagacaggatttgcgtcacctgcgtgtatgtagtgtggaccctcctggatgcagagatattgatgatgcattgcattgtatgcctctttcaaatggaaattttgaagtgggagttcatattgccgatgtcacaaattttgttcatcctggaactccactcgatgatgaggcttcacaaaggggcacttctgtatatctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="+" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="96576" stop="103646"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="96876" g_stop="96973" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="98" r_length="98" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="96974" i_stop="100136" i_length="3163">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.964" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="100137" g_stop="100284" g_length="148"/>
          <reference_exon_boundary r_type="cDNA" r_start="99" r_stop="246" r_length="148" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="100285" i_stop="101493" i_length="1209">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="101494" g_stop="101734" g_length="241"/>
          <reference_exon_boundary r_type="cDNA" r_start="247" r_stop="487" r_length="241" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="101735" i_stop="102003" i_length="269">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="102004" g_stop="102160" g_length="157"/>
          <reference_exon_boundary r_type="cDNA" r_start="488" r_stop="644" r_length="157" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="102161" i_stop="102297" i_length="137">
            <donor d_prob="0.941" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="102298" g_stop="102366" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="645" r_stop="713" r_length="69" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="102367" i_stop="103263" i_length="897">
            <donor d_prob="0.900" d_score="1.00"/>
            <acceptor a_prob="0.877" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="103264" g_stop="103346" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="714" r_stop="796" r_length="83" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="+" ref_id="SGN-E549019" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>796</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E549019" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="96876" e_stop="96973"/>
          <exon e_start="100137" e_stop="100284"/>
          <exon e_start="101494" e_stop="101734"/>
          <exon e_start="102004" e_stop="102160"/>
          <exon e_start="102298" e_stop="102366"/>
          <exon e_start="103264" e_stop="103346"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAACATGAATAGAGCTTTTGACGGTGATATAGTGGCAGTTGAGCTTTTGCCTCCAGAACAGTGGCACGAGGAGAAGTCTTTGGCATTAGCCGATGAAGGTTTGTCCACTTCTTTTTTTCTTCAATGAACATGGCTTTATTGCAAAAATGATCTAATTTGCTTTTGAACTATGCGAAACGGTCTACATTTATCCTCTATTTACAGTTGGGTCATCAAATAACTAAAAATGATTTAAGAGTAATTAGTATCTGATCAAACTAATAAGCATTATCATTTGCCACGTATATAATACGTGGCAAATGTTGCTCGGTATGGCACCTCAGGTGGGTCTCTGAGATTTTTGGAGAAGATCCATTTCTTGGCCTTTCTTCTCTGTCTCATAGGCAAGCTGATGCTTGCAGCCATGCTGAGTTTCAAAGCTTTTGAGCTAATTGTGTTTTGGTGTTGCAAATTCAATTTTTTTGTCACTAAACCACCCTTTTGGTGAAACTACACAACCTTATACTATTCTTGTTCTTATTACTCTCTCTGGTATAACTCGAAAAAGCAATCAAACATGTTCTCTTTTGAGGTGAAAAACTGTGCTTGACATGACACCTCAGGTTGGTCTATGAGATTTAGGAGAAAATTCCACTTTTCATGGTGTCTCTTCTATGTTTGATAATGCCAATTGATGCCTACAGCCATGACAGACCTCAAATCTTTTGAGCTGATTCGTGTTTTTGCTTGGCAATGTTCAGGTCCCCCCCCCCCCCCCATCCCCACCCCAATCCACTATTTTTGTAAAATTACACATGGCCTTCCTCTTTTCTTGTTATTTATATCACTGTCTGCTCCTTTTTATAAACCATGAGGATGTGGAGGTTTTGTCTTCCGCGGAGGTTCAATTAAACTTGATTTCTCTTGAGTTGAAAAACTGTTGATTGGCACTGCACCTCAGGTAGGTCTATTTTTTTTTGAAATAGGTAACTTTGTATTCACACAAAAGAGTTATTCAAGGAATTGATGTGGAGGGATTTAAAAACCCCCAGGGGGTGCCATCATTCACAAATCCAAAAAATTTCAAAAAATTTACAGTTGGCCTATAACCTCCAGTAAACTATCTACTTCCCCCACTAAATCTTGCTTACACCAAAAAAACAAAAGGCTAAGACATCTCATCTTAATCATCTGGGAACTGCTAGTCCTCCCTTCAAAGCACCTTTCTTTCCTTTCTTTCCAGAGTGTCCACCATGCAAGCAGGTACATTTTTTCACCAATCTTCCTTTGACCCTCTCTTCCCGATTCCTTGCCATTGTGTTAGTACCTCAAAAGTGGTTCTGGGCATTGTCTTATCAACCTCGAGCATACAAATGAACAAGTTCCACAGATCTGTAGCCATCCTACAATGCAAAAATAAATGGCCATCGTCTTGTTCACACATATAGCACCTCGAGCAGATCTGTATTCCTCTTCTTTGTAACACTTCGTGGGTTAGACAAGCTCTTCTAATTACCAACCAAGTGAAGCAAGCGACATTTAAAGGGATCTTAATCTTCCATATTAATTTCCAGGGCCAAACTGTTGTCAAAAAATGGTTGATGTTCCTTTACTAGTAACAGGACTTCACTGGAGAAACTCCCCTGCTATGCAATTTCCAAACTGGTTTGTCGGGCTCTGCATTTATGCCAAGAAACGGGTTCAAGGCCTGAAGCAGGTCTGTTACTCTTTCAACCTCCCAATCATTTAGAGCCCTTCTAAACATAAGAGTCCAGCCTTGAGGGCACCTCAAGTAGGTCTATTAGATTTGGAAAATCAATTTCCATTTCTTGGTGTTCTTCTCTGTCTGATATGACTAACTAATGCTTGCAGCCACGACAGATTTTAAAGCGTTTGAGCTTGTTGTGTTTTGGCTTTCAAAGTTCATTGTTTCTCCTCAGCAAACCACTCTCTTGGTGAAATTACACTTTTCTTATTTTTATTTCTGTGCGGTATAATTCAAAATGGCAACCAAACAGATTCTCTCATGAGCTGAAAAACTGTTGGGTCTGTGAGATGTTGGAAAAAGTTCCATTTCTTAGTGTTTCTTCACTATCACATAAGGCTAACTTATGCTTCGGCAAATTCAGTCTTTTTCTCACCAATTCACCCTTTTGACATGACTTTTCTTATTTTTCTTTCTCTCTCTGGTTTAACTCAATATGGCAATCAAACATGTTCTCTCTTGAACTAAAAAACTATTGTTGCTTTCTGCTCCTTGCAGCCATCGTGGACTAGCCCATTTTTCTGATATTCTTTTTAACAATCTGAGCCTCGTTTCTTTTGAACTTGAAATTCCTTCTATAATTTATCTGCTTTTCACATGGTCTTTAGTGTCAGGAATCCTCTATCATTGTCATTATCCCTTTTTGTTTTATAAATCTGAGAATCTCAATTCATAAGGGTAGTTTATTTGAAAATAAGGGAAGATATAACCTACTTTTGTTATTGCAGGGACATGATTGTCCCAACATTATTAACAGAGGTCATATCTAGACCATTTCTCATGGTTTAGTTGTAAATATGACATGTTTCCCTATTATATTGCAACTCGACTATCTTGATTAAGAAGGAGATCTCTATATTTCACTTTTTATGATATTATTAAAGAATCCTATTTTAAAGGTAACAACTCTATTATTATATCGCTAAAACAAACCTGTTGTGGCCATCTATAATTTATTTGATGAAGCAAGTGTTTAATAAGTCACAAAGGCATCAAGGAGATGCATAATTACAGAAGAGGGTGAGATATCAGCTCATAAAAAGATATCAAAAACCTAATATAAGTCTATAGAGCTGACAAATCCAAAGGTCTAGCACCAAGATTAAAGAGCTAATAAATTAAAAAAAAGATTCTGCGTTATATACCGGGGTGAGATTAACCCATCTAAAAAGAGTAGTCATTTCCATTTCAGTAGGTTTGACCCACTTCTGATTATTACACACCATTACTTGTACAAATTTTACAAGTTTCGAAAACTTAATTCATTCCATGTTATATTTTTTCTGTAATAGTATATCTTCAAATTTACTCTTCTGGAACTGCTTTATTATCTCTCTAGTGTGATAAGTTACTCAATTATTAATTTATGTTTGTAACTTTCATGCAAATCAAAGTGAATGTGTAAACTTGTCCTTCCGCTCCTGCATGTCTGTCCATCGCGATTGTCCTCACTTGCTCTCATTATGGATGATTTTTTTTGTGCACGTAAATCTCATAACTATTTCGGTATCCTGAAGATGATGAAGAAGAAGATGTTCATTTAGCTCCAAACACTGCTGATGATGCTCCAAGAGCCCTGAATCAAGGGCAAACTGCACCTGAGGAAATGAAACCTTCTCGTCCAACTGGATGTGTTGTTGGTATCATAAAGCGGAACTGGCACTCGTAAGTTATTGTTTGTTATCTGCTGGCTTTATATGTGTTGTTGTTCTTGTCATTCAGTGTGGTTTTTAGCTTAATTTTAAAGTTATTCTTATCTTCTTTTTTTTTTTTAAAAGCACCTCAAAGGATATTTTGAAATGTGCATGCATTACACAATCATGTTTTCAGAAAATTCAAATAGACATTTCAAGTCTATTTCTGAATATACCTTCAAAACAATTTTCCTTTGTTGGTTCTTACCTGAACAAACACTTGGTCCGTCCAAATAGGTCACCAGCTAGCAACACAGTTTTGGTCATTTAACTTTAGGAACCTTTCAGCTACCATGTTTTGGGTCAAACTTGATTTGTCCATGGCATAGTGTTTGATGGTTTATTCTTCATTTTTTCAAATCGTAAGTCTTTCGAATTCTTTTCTTTCCTTGAAATGGATAAAATGTTTTGGGAATTTTTTACTTTAATCAGGTTGAAAAGCCTGCTATTTTTTTTTTCTAACATGATAGATATTTGTAAAAAATGTCTTTGCCTAATGTTACTGATGAGTCACTCAAACTAAAAACTAATGGGACCCCTTCTTTTACACATTTGAACTACATTTTTATACTTTTGCTTCGTTTGAGCCGTCGTCGCTCTAATGCATAAAAAGGGGGCTAGTGCTTTTTCCCTCAAAGTGTTAGAAAAAATTATTTAATTGTCTTTACCATGAATCATCATGCGTTGGTCATTTCCCCCTAAAACATGTAAAAAGAAATTATATAGAGAGTCATACTTTGCTTGTTGTGATTCCATGTTAAAGCATTCACATCTCACCTAAATCTTAAGCTAAGAGCTTACACCCTCCAGTGCCACTTTTCTTCTTCCTGACGACTGTTCTAAGTATTGCTCCTTTATCGGGACAGTTTAGACACTGCTTCTACATAAGGCACCTTTTCAGGTGTTGGTCGTTCCTCTTGAGACTGTTTATTACCTCTTGTGATAGCTTTACGATTAAGTCGGGCCGAGTTCAATTTCCGAAATCATTTGCAAAGTGGCATGTGGATTAGAGAGTCTGCCTCTTTCAATATGTGGAAATCCTGCAAAAGTTATATGGTCGCTGGAGTCTCTGCACTGTCACTGAACTCTCATACTTTAAATTGCTGTATGCCTGTATCTATTTCCACCAGCAAAGTCTTCTTTTATCTGGTATATAATATTGTATGTTTCATCATTGCAGTTACTGTGGATCCTTGGAGCCTATGCCTATGCCAGCTGGTGATGGTGGTCGTGCCCATGCCTTATTTGTATCCAAAGACCGCAGAATTCCGAAGATACGGATACAAACTCGTCAATTGGGAAATTTGCTGGATAAACGGATTATTGTTGCGGTTGATTCATGGGATCGTTTGTCCCGATATCCAACTGGTCACTATGTGAGGACTATTGGTGAAATAGGTGATAGGGACACCGAAACAGAGGTATGTTTGATATGTCATTCATTGCTCTTTAAATTTGAACAAATTATCCTTCTCCACCTTTTCTGTAATGTAATTTTGAGATTGTTTTAGTTTTTTTGTTGTGGCTTATTGTTGAGTACCTTCTATTAAGTGTTCAAGGCATTGGTGTCCTTTGCTTGTATTGTAGGTACCGATATATTATCTTACATGCTTAAATAATTAGGATTCGATTTATTTCTTGATGATGATGAATAACAGTCCTGACTATATTTGTTCTGTAATAATTTCAGGTGGTACTAATAGAGAATGATATAGATGCCAGGCCATTTTCTGCCCAAGTGTTGGCGTGCTTGCCACCATTACCTTGGTTGGTGTCTTCTCAAGATTTGACAAATCCGATTAGACAGGATTTGCGTCACCTGCGTGTATGTAGTGTGGACCCTCCTGGTATGTTGTCCAAATTATAGTTCTTCTCGTCTTCCATTTAACTGCAGTGCCCACATTTAGTTTGTGTCAGCATAGATGAGATACTTTTTACATGTGATGTCAATCTGAGACAGAATTCTGCTTTTTCTGTGATGCAGGATGCAGAGATATTGATGATGCATTGCATTGTATGCCTCTTTCAAATGGAAATTTTGAAGTGGGAGTTCGTATCCATGTTTATTTTTAAATCTTTTGGCTAGAATTTACAGAACTTTTTTTTGAGTAAAGTAACTTGGTATTAAAACCAGCACTTAGTACTGAAAAAAACAATTTACAAATGGAATAGATACATAATATACCAGATGCGAAACCAATCTTAATGGTGCCTAGGACATCTAGGATTGATTCAGTGTCACTAGAAGAGAAAAGCAAAATGCATTTTAGCTTAATATCCTGTACTGAACTCCTCCTGCCATCAAAACATCTATCATTTCTTCCTTCCAAATAGTCCACCAAATACATGATGGGATGATCCTCTTTACAAAACTTAACACTGATCTCTTTTGCTGATTTCCTTCTTCAAGAGACAGTGATCTCCTTGAATAGGGATGTGATGAGGGTTTTGGTCACATGAGGCTGTTCGAATCATCTTTGGCTTATTTCTGTGTACAACCAGTGTAATGATGGGTATTCATTTGTGATACCATCTCTTATTTCCTTTAATGCTTTCTATCCTCATGATTTTGTACCTAAATATCTTTTCACTTCACAAATTTTGTTGGCCCTAGCTACAATAGTTGTGCACTCCCTTCATACGGGGAAGGACCCTGCTAGACAGACACTTGATTGTGTGGTGTGTAGTGGGTGCGTCTTAGTGTCTTCTTACTATGGAAAAGAAATGAGACAATAGATGATTCTCATTCTCGAAAATCCACTAATTCTCTCTTTTCTTTCGCCTAAACAATTTCATTGCCTCACTCCGCTCGCCTCCAAAAACTTAGTTAGTTCGCCTACAAAACAACCTTTTGTATTCCAGGACTTTTTTGTTATTTATTTATATTTATAAATAAATATATCATCTACATCATGGGAAAGTCTAGTTGTGAGTCTTTAATACATACCAGATATTGCCGATGTCACAAATTTTGTTCATCCTGGAACTCCACTCGATGATGAGGCTTCACAAAGGGGCACTTCTGTATATCTT</genome_strand>
        <mrna_strand>AAACATGAATAGAGCTTTTGACGGTGATATAGTGGCAGTTGAGCTTTTGCCTCCAGAACAGTGGCACGAGGAGAAGTCTTTGGCATTAGCCGATGAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGATGAAGAAGAAGATGTTCATTTAGCTCCAAACACTGCTGATGATGCTCCAAGAGCCCTGAATCAAGGGCAAACTGCACCTGAGGAAATGAAACCTTCTCGTCCAACTGGATGTGTTGTTGGTATCATAAAGCGGAACTGGCACTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACTGTGGATCCTTGGAGCCTATGCCTATGCCAGCTGGTGATGGTGGTCGTGCCCATGCCTTATTTGTATCCAAAGACCGCAGAATTCCGAAGATACGGATACAAACTCGTCAATTGGGAAATTTGCTGGATAAACGGATTATTGTTGCGGTTGATTCATGGGATCGTTTGTCCCGATATCCAACTGGTCACTATGTGAGGACTATTGGTGAAATAGGTGATAGGGACACCGAAACAGAG.............................................................................................................................................................................................................................................................................GTGGTACTAATAGAGAATGATATAGATGCCAGGCCATTTTCTGCCCAAGTGTTGGCGTGCTTGCCACCATTACCTTGGTTGGTGTCTTCTCAAGATTTGACAAATCCGATTAGACAGGATTTGCGTCACCTGCGTGTATGTAGTGTGGACCCTCCTG.........................................................................................................................................GATGCAGAGATATTGATGATGCATTGCATTGTATGCCTCTTTCAAATGGAAATTTTGAAGTGGGAGTTC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTGCCGATGTCACAAATTTTGTTCATCCTGGAACTCCACTCGATGATGAGGCTTCACAAAGGGGCACTTCTGTATATCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E740922" ref_strand="+" ref_description="SGN-E740922 [LC23CA03]">
      <seq>gttatgaggacaagtctctgggagggggggacgagcatgatcttgaacaagatgtgcatttagctaaaaacactgctgatgatgctccaagagccctgaatcaagggcaaactgcacctgaggaaatgaaaccttctcgtccaactggatgtgttgtcggtatcatagagcgaaactggcactcttactgtggatccttggagcctatacctatgccagctggtgatggtggtcgtgcccatgccttatttgtgtccaaagaccgctcaattccgaagatacggatacaaactcgtctggtgggaaatttgctggatgaacggattattgttgcggttaattcatgggatcgtttgtcccgatatccacactggtcactatgtgaggactattggtgaaataggtgatagggacaccgaaacagaggtggtactaatagagaatgatatagatgcccggccattttctgcccaagtgttggcgtgcttgccaccattaccttggttggtgtcatctccagatttgacaaatccgattagacaggatttgcgtcacctgcgtgtatgtagtgtggaccctcctggatgcagagatattgatgatgcattgcgttgtatgcctctttcaaatggaaattttggagtgcgagttcatattgccgatgtcacaaattttgttcatacctggactccactcgatgatgaggcttcacaaaggggcacttctgtatatcttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="+" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="99845" stop="103647"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="100137" g_stop="100284" g_length="148"/>
          <reference_exon_boundary r_type="cDNA" r_start="37" r_stop="184" r_length="148" r_score="0.932"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="100285" i_stop="101493" i_length="1209">
            <donor d_prob="0.989" d_score="0.94"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="101494" g_stop="101734" g_length="241"/>
          <reference_exon_boundary r_type="cDNA" r_start="185" r_stop="426" r_length="242" r_score="0.954"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="101735" i_stop="102003" i_length="269">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="102004" g_stop="102160" g_length="157"/>
          <reference_exon_boundary r_type="cDNA" r_start="427" r_stop="583" r_length="157" r_score="0.981"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="102161" i_stop="102297" i_length="137">
            <donor d_prob="0.941" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="102298" g_stop="102366" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="584" r_stop="652" r_length="69" r_score="0.957"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="102367" i_stop="103263" i_length="897">
            <donor d_prob="0.900" d_score="0.94"/>
            <acceptor a_prob="0.877" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="103264" g_stop="103347" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="653" r_stop="736" r_length="84" r_score="0.952"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="+" ref_id="SGN-E740922" ref_strand="+">
        <total_alignment_score>0.956</total_alignment_score>
        <cumulative_length_of_scored_exons>699</cumulative_length_of_scored_exons>
        <coverage percentage="0.950" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E740922" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="100137" e_stop="100284"/>
          <exon e_start="101494" e_stop="101734"/>
          <exon e_start="102004" e_stop="102160"/>
          <exon e_start="102298" e_stop="102366"/>
          <exon e_start="103264" e_stop="103347"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGATGAAGAAGAAGATGTTCATTTAGCTCCAAACACTGCTGATGATGCTCCAAGAGCCCTGAATCAAGGGCAAACTGCACCTGAGGAAATGAAACCTTCTCGTCCAACTGGATGTGTTGTTGGTATCATAAAGCGGAACTGGCACTCGTAAGTTATTGTTTGTTATCTGCTGGCTTTATATGTGTTGTTGTTCTTGTCATTCAGTGTGGTTTTTAGCTTAATTTTAAAGTTATTCTTATCTTCTTTTTTTTTTTTAAAAGCACCTCAAAGGATATTTTGAAATGTGCATGCATTACACAATCATGTTTTCAGAAAATTCAAATAGACATTTCAAGTCTATTTCTGAATATACCTTCAAAACAATTTTCCTTTGTTGGTTCTTACCTGAACAAACACTTGGTCCGTCCAAATAGGTCACCAGCTAGCAACACAGTTTTGGTCATTTAACTTTAGGAACCTTTCAGCTACCATGTTTTGGGTCAAACTTGATTTGTCCATGGCATAGTGTTTGATGGTTTATTCTTCATTTTTTCAAATCGTAAGTCTTTCGAATTCTTTTCTTTCCTTGAAATGGATAAAATGTTTTGGGAATTTTTTACTTTAATCAGGTTGAAAAGCCTGCTATTTTTTTTTTCTAACATGATAGATATTTGTAAAAAATGTCTTTGCCTAATGTTACTGATGAGTCACTCAAACTAAAAACTAATGGGACCCCTTCTTTTACACATTTGAACTACATTTTTATACTTTTGCTTCGTTTGAGCCGTCGTCGCTCTAATGCATAAAAAGGGGGCTAGTGCTTTTTCCCTCAAAGTGTTAGAAAAAATTATTTAATTGTCTTTACCATGAATCATCATGCGTTGGTCATTTCCCCCTAAAACATGTAAAAAGAAATTATATAGAGAGTCATACTTTGCTTGTTGTGATTCCATGTTAAAGCATTCACATCTCACCTAAATCTTAAGCTAAGAGCTTACACCCTCCAGTGCCACTTTTCTTCTTCCTGACGACTGTTCTAAGTATTGCTCCTTTATCGGGACAGTTTAGACACTGCTTCTACATAAGGCACCTTTTCAGGTGTTGGTCGTTCCTCTTGAGACTGTTTATTACCTCTTGTGATAGCTTTACGATTAAGTCGGGCCGAGTTCAATTTCCGAAATCATTTGCAAAGTGGCATGTGGATTAGAGAGTCTGCCTCTTTCAATATGTGGAAATCCTGCAAAAGTTATATGGTCGCTGGAGTCTCTGCACTGTCACTGAACTCTCATACTTTAAATTGCTGTATGCCTGTATCTATTTCCACCAGCAAAGTCTTCTTTTATCTGGTATATAATATTGTATGTTTCATCATTGCAGTTACTGTGGATCCTTGGAGCCTATGCCTATGCCAGCTGGTGATGGTGGTCGTGCCCATGCCTTATTTGTATCCAAAGACCGCAGAATTCCGAAGATACGGATACAAACTCGTCAATTGGGAAATTTGCTGGATAAACGGATTATTGTTGCGGTTGATTCATGGGATCGTTTGTCCCGATATCCA-ACTGGTCACTATGTGAGGACTATTGGTGAAATAGGTGATAGGGACACCGAAACAGAGGTATGTTTGATATGTCATTCATTGCTCTTTAAATTTGAACAAATTATCCTTCTCCACCTTTTCTGTAATGTAATTTTGAGATTGTTTTAGTTTTTTTGTTGTGGCTTATTGTTGAGTACCTTCTATTAAGTGTTCAAGGCATTGGTGTCCTTTGCTTGTATTGTAGGTACCGATATATTATCTTACATGCTTAAATAATTAGGATTCGATTTATTTCTTGATGATGATGAATAACAGTCCTGACTATATTTGTTCTGTAATAATTTCAGGTGGTACTAATAGAGAATGATATAGATGCCAGGCCATTTTCTGCCCAAGTGTTGGCGTGCTTGCCACCATTACCTTGGTTGGTGTCTTCTCAAGATTTGACAAATCCGATTAGACAGGATTTGCGTCACCTGCGTGTATGTAGTGTGGACCCTCCTGGTATGTTGTCCAAATTATAGTTCTTCTCGTCTTCCATTTAACTGCAGTGCCCACATTTAGTTTGTGTCAGCATAGATGAGATACTTTTTACATGTGATGTCAATCTGAGACAGAATTCTGCTTTTTCTGTGATGCAGGATGCAGAGATATTGATGATGCATTGCATTGTATGCCTCTTTCAAATGGAAATTTTGAAGTGGGAGTTCGTATCCATGTTTATTTTTAAATCTTTTGGCTAGAATTTACAGAACTTTTTTTTGAGTAAAGTAACTTGGTATTAAAACCAGCACTTAGTACTGAAAAAAACAATTTACAAATGGAATAGATACATAATATACCAGATGCGAAACCAATCTTAATGGTGCCTAGGACATCTAGGATTGATTCAGTGTCACTAGAAGAGAAAAGCAAAATGCATTTTAGCTTAATATCCTGTACTGAACTCCTCCTGCCATCAAAACATCTATCATTTCTTCCTTCCAAATAGTCCACCAAATACATGATGGGATGATCCTCTTTACAAAACTTAACACTGATCTCTTTTGCTGATTTCCTTCTTCAAGAGACAGTGATCTCCTTGAATAGGGATGTGATGAGGGTTTTGGTCACATGAGGCTGTTCGAATCATCTTTGGCTTATTTCTGTGTACAACCAGTGTAATGATGGGTATTCATTTGTGATACCATCTCTTATTTCCTTTAATGCTTTCTATCCTCATGATTTTGTACCTAAATATCTTTTCACTTCACAAATTTTGTTGGCCCTAGCTACAATAGTTGTGCACTCCCTTCATACGGGGAAGGACCCTGCTAGACAGACACTTGATTGTGTGGTGTGTAGTGGGTGCGTCTTAGTGTCTTCTTACTATGGAAAAGAAATGAGACAATAGATGATTCTCATTCTCGAAAATCCACTAATTCTCTCTTTTCTTTCGCCTAAACAATTTCATTGCCTCACTCCGCTCGCCTCCAAAAACTTAGTTAGTTCGCCTACAAAACAACCTTTTGTATTCCAGGACTTTTTTGTTATTTATTTATATTTATAAATAAATATATCATCTACATCATGGGAAAGTCTAGTTGTGAGTCTTTAATACATACCAGATATTGCCGATGTCACAAATTTTGTTCATCCTGGAACTCCACTCGATGATGAGGCTTCACAAAGGGGCACTTCTGTATATCTTG</genome_strand>
        <mrna_strand>ATGATCTTGAACAAGATGTGCATTTAGCTAAAAACACTGCTGATGATGCTCCAAGAGCCCTGAATCAAGGGCAAACTGCACCTGAGGAAATGAAACCTTCTCGTCCAACTGGATGTGTTGTCGGTATCATAGAGCGAAACTGGCACTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACTGTGGATCCTTGGAGCCTATACCTATGCCAGCTGGTGATGGTGGTCGTGCCCATGCCTTATTTGTGTCCAAAGACCGCTCAATTCCGAAGATACGGATACAAACTCGTCTGGTGGGAAATTTGCTGGATGAACGGATTATTGTTGCGGTTAATTCATGGGATCGTTTGTCCCGATATCCACACTGGTCACTATGTGAGGACTATTGGTGAAATAGGTGATAGGGACACCGAAACAGAG.............................................................................................................................................................................................................................................................................GTGGTACTAATAGAGAATGATATAGATGCCCGGCCATTTTCTGCCCAAGTGTTGGCGTGCTTGCCACCATTACCTTGGTTGGTGTCATCTCCAGATTTGACAAATCCGATTAGACAGGATTTGCGTCACCTGCGTGTATGTAGTGTGGACCCTCCTG.........................................................................................................................................GATGCAGAGATATTGATGATGCATTGCGTTGTATGCCTCTTTCAAATGGAAATTTTGGAGTGCGAGTTC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTGCCGATGTCACAAATTTTGTTCATACCTGGACTCCACTCGATGATGAGGCTTCACAAAGGGGCACTTCTGTATATCTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E307399" ref_strand="+" ref_description="SGN-E307399 [cLEY-12-O9]">
      <seq>tttggcattatccgatgaagatgatgaagaagaagatgttcatttagctccaaacactgctgatgatgctccaagagccctgaatcaagggcaaactgcacctgaggaaatgaaaccttctcgtccaactggatgtgttgtcggtatcataaagcggaactggcactcttactgtggatccttggagcctatgcctatgccagctggtgatggtggtcgtgcccatgccttatttgtatccaaagaccgcacaattccgaagatacggatacacactcgtcaattgggaaattagctggataaacggattattgttgcggttgattcatgggatcgtctgtgccgatatccaactggtcactatgtgaggactattggtgaaatacgtgatagggac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="+" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="99832" stop="102022"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="100137" g_stop="100284" g_length="148"/>
          <reference_exon_boundary r_type="cDNA" r_start="21" r_stop="168" r_length="148" r_score="0.993"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="100285" i_stop="101493" i_length="1209">
            <donor d_prob="0.989" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="101494" g_stop="101722" g_length="229"/>
          <reference_exon_boundary r_type="cDNA" r_start="169" r_stop="397" r_length="229" r_score="0.974"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="+" ref_id="SGN-E307399" ref_strand="+">
        <total_alignment_score>0.981</total_alignment_score>
        <cumulative_length_of_scored_exons>377</cumulative_length_of_scored_exons>
        <coverage percentage="0.950" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E307399" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="100137" e_stop="100284"/>
          <exon e_start="101494" e_stop="101722"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGATGAAGAAGAAGATGTTCATTTAGCTCCAAACACTGCTGATGATGCTCCAAGAGCCCTGAATCAAGGGCAAACTGCACCTGAGGAAATGAAACCTTCTCGTCCAACTGGATGTGTTGTTGGTATCATAAAGCGGAACTGGCACTCGTAAGTTATTGTTTGTTATCTGCTGGCTTTATATGTGTTGTTGTTCTTGTCATTCAGTGTGGTTTTTAGCTTAATTTTAAAGTTATTCTTATCTTCTTTTTTTTTTTTAAAAGCACCTCAAAGGATATTTTGAAATGTGCATGCATTACACAATCATGTTTTCAGAAAATTCAAATAGACATTTCAAGTCTATTTCTGAATATACCTTCAAAACAATTTTCCTTTGTTGGTTCTTACCTGAACAAACACTTGGTCCGTCCAAATAGGTCACCAGCTAGCAACACAGTTTTGGTCATTTAACTTTAGGAACCTTTCAGCTACCATGTTTTGGGTCAAACTTGATTTGTCCATGGCATAGTGTTTGATGGTTTATTCTTCATTTTTTCAAATCGTAAGTCTTTCGAATTCTTTTCTTTCCTTGAAATGGATAAAATGTTTTGGGAATTTTTTACTTTAATCAGGTTGAAAAGCCTGCTATTTTTTTTTTCTAACATGATAGATATTTGTAAAAAATGTCTTTGCCTAATGTTACTGATGAGTCACTCAAACTAAAAACTAATGGGACCCCTTCTTTTACACATTTGAACTACATTTTTATACTTTTGCTTCGTTTGAGCCGTCGTCGCTCTAATGCATAAAAAGGGGGCTAGTGCTTTTTCCCTCAAAGTGTTAGAAAAAATTATTTAATTGTCTTTACCATGAATCATCATGCGTTGGTCATTTCCCCCTAAAACATGTAAAAAGAAATTATATAGAGAGTCATACTTTGCTTGTTGTGATTCCATGTTAAAGCATTCACATCTCACCTAAATCTTAAGCTAAGAGCTTACACCCTCCAGTGCCACTTTTCTTCTTCCTGACGACTGTTCTAAGTATTGCTCCTTTATCGGGACAGTTTAGACACTGCTTCTACATAAGGCACCTTTTCAGGTGTTGGTCGTTCCTCTTGAGACTGTTTATTACCTCTTGTGATAGCTTTACGATTAAGTCGGGCCGAGTTCAATTTCCGAAATCATTTGCAAAGTGGCATGTGGATTAGAGAGTCTGCCTCTTTCAATATGTGGAAATCCTGCAAAAGTTATATGGTCGCTGGAGTCTCTGCACTGTCACTGAACTCTCATACTTTAAATTGCTGTATGCCTGTATCTATTTCCACCAGCAAAGTCTTCTTTTATCTGGTATATAATATTGTATGTTTCATCATTGCAGTTACTGTGGATCCTTGGAGCCTATGCCTATGCCAGCTGGTGATGGTGGTCGTGCCCATGCCTTATTTGTATCCAAAGACCGCAGAATTCCGAAGATACGGATACAAACTCGTCAATTGGGAAATTTGCTGGATAAACGGATTATTGTTGCGGTTGATTCATGGGATCGTTTGTCCCGATATCCAACTGGTCACTATGTGAGGACTATTGGTGAAATAGGTGATAGGGAC</genome_strand>
        <mrna_strand>ATGATGAAGAAGAAGATGTTCATTTAGCTCCAAACACTGCTGATGATGCTCCAAGAGCCCTGAATCAAGGGCAAACTGCACCTGAGGAAATGAAACCTTCTCGTCCAACTGGATGTGTTGTCGGTATCATAAAGCGGAACTGGCACTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACTGTGGATCCTTGGAGCCTATGCCTATGCCAGCTGGTGATGGTGGTCGTGCCCATGCCTTATTTGTATCCAAAGACCGCACAATTCCGAAGATACGGATACACACTCGTCAATTGGGAAATTAGCTGGATAAACGGATTATTGTTGCGGTTGATTCATGGGATCGTCTGTGCCGATATCCAACTGGTCACTATGTGAGGACTATTGGTGAAATACGTGATAGGGAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E566924" ref_strand="+" ref_description="SGN-E566924 [10969]">
      <seq>tccaaggcaaactgcacctgaggaaatgaaaccttctcggtccaactgggatgtgttgttggtatcataaagcggaactggcactcttactgtggatccttggagccaatgcctatgccagctggtgatggtggtcgtgcccatgccttattcgtatccaaagaccgcaggattccaaagatacggatacaaactcgtcaattgggaaatttgctggataaacggattatcgttgcggttgattcatgggatcgtttgtctcgatatccaaacggtcactatgtgaggacaattggtgaaataggtgatagggacaccgaaacagaggtggtactaatagagaatgatatagatgccaggccattttctgcccaagtgttggcgtgcttgccaccattaccttggtctgtgtcttctcaagatttgacaaatcctattagacaggatttgcgtcacctgcgtgtat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="+" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="99902" stop="102442"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="100201" g_stop="100284" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="86" r_length="86" r_score="0.929"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="100285" i_stop="101493" i_length="1209">
            <donor d_prob="0.989" d_score="0.92"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="101494" g_stop="101734" g_length="241"/>
          <reference_exon_boundary r_type="cDNA" r_start="87" r_stop="327" r_length="241" r_score="0.963"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="101735" i_stop="102003" i_length="269">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="102004" g_stop="102142" g_length="139"/>
          <reference_exon_boundary r_type="cDNA" r_start="328" r_stop="466" r_length="139" r_score="0.978"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="+" ref_id="SGN-E566924" ref_strand="+">
        <total_alignment_score>0.961</total_alignment_score>
        <cumulative_length_of_scored_exons>464</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E566924" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="100201" e_stop="100284"/>
          <exon e_start="101494" e_stop="101734"/>
          <exon e_start="102004" e_stop="102142"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAAGGGCAAACTGCACCTGAGGAAATGAAACCTTCTC-GTCCAACT-GGATGTGTTGTTGGTATCATAAAGCGGAACTGGCACTCGTAAGTTATTGTTTGTTATCTGCTGGCTTTATATGTGTTGTTGTTCTTGTCATTCAGTGTGGTTTTTAGCTTAATTTTAAAGTTATTCTTATCTTCTTTTTTTTTTTTAAAAGCACCTCAAAGGATATTTTGAAATGTGCATGCATTACACAATCATGTTTTCAGAAAATTCAAATAGACATTTCAAGTCTATTTCTGAATATACCTTCAAAACAATTTTCCTTTGTTGGTTCTTACCTGAACAAACACTTGGTCCGTCCAAATAGGTCACCAGCTAGCAACACAGTTTTGGTCATTTAACTTTAGGAACCTTTCAGCTACCATGTTTTGGGTCAAACTTGATTTGTCCATGGCATAGTGTTTGATGGTTTATTCTTCATTTTTTCAAATCGTAAGTCTTTCGAATTCTTTTCTTTCCTTGAAATGGATAAAATGTTTTGGGAATTTTTTACTTTAATCAGGTTGAAAAGCCTGCTATTTTTTTTTTCTAACATGATAGATATTTGTAAAAAATGTCTTTGCCTAATGTTACTGATGAGTCACTCAAACTAAAAACTAATGGGACCCCTTCTTTTACACATTTGAACTACATTTTTATACTTTTGCTTCGTTTGAGCCGTCGTCGCTCTAATGCATAAAAAGGGGGCTAGTGCTTTTTCCCTCAAAGTGTTAGAAAAAATTATTTAATTGTCTTTACCATGAATCATCATGCGTTGGTCATTTCCCCCTAAAACATGTAAAAAGAAATTATATAGAGAGTCATACTTTGCTTGTTGTGATTCCATGTTAAAGCATTCACATCTCACCTAAATCTTAAGCTAAGAGCTTACACCCTCCAGTGCCACTTTTCTTCTTCCTGACGACTGTTCTAAGTATTGCTCCTTTATCGGGACAGTTTAGACACTGCTTCTACATAAGGCACCTTTTCAGGTGTTGGTCGTTCCTCTTGAGACTGTTTATTACCTCTTGTGATAGCTTTACGATTAAGTCGGGCCGAGTTCAATTTCCGAAATCATTTGCAAAGTGGCATGTGGATTAGAGAGTCTGCCTCTTTCAATATGTGGAAATCCTGCAAAAGTTATATGGTCGCTGGAGTCTCTGCACTGTCACTGAACTCTCATACTTTAAATTGCTGTATGCCTGTATCTATTTCCACCAGCAAAGTCTTCTTTTATCTGGTATATAATATTGTATGTTTCATCATTGCAGTTACTGTGGATCCTTGGAGCCTATGCCTATGCCAGCTGGTGATGGTGGTCGTGCCCATGCCTTATTTGTATCCAAAGACCGCAGAATTCCGAAGATACGGATACAAACTCGTCAATTGGGAAATTTGCTGGATAAACGGATTATTGTTGCGGTTGATTCATGGGATCGTTTGTCCCGATATCCAACTGGTCACTATGTGAGGACTATTGGTGAAATAGGTGATAGGGACACCGAAACAGAGGTATGTTTGATATGTCATTCATTGCTCTTTAAATTTGAACAAATTATCCTTCTCCACCTTTTCTGTAATGTAATTTTGAGATTGTTTTAGTTTTTTTGTTGTGGCTTATTGTTGAGTACCTTCTATTAAGTGTTCAAGGCATTGGTGTCCTTTGCTTGTATTGTAGGTACCGATATATTATCTTACATGCTTAAATAATTAGGATTCGATTTATTTCTTGATGATGATGAATAACAGTCCTGACTATATTTGTTCTGTAATAATTTCAGGTGGTACTAATAGAGAATGATATAGATGCCAGGCCATTTTCTGCCCAAGTGTTGGCGTGCTTGCCACCATTACCTTGGTTGGTGTCTTCTCAAGATTTGACAAATCCGATTAGACAGGATTTGCGTCACCTGCGTGTAT</genome_strand>
        <mrna_strand>TCCAAGGCAAACTGCACCTGAGGAAATGAAACCTTCTCGGTCCAACTGGGATGTGTTGTTGGTATCATAAAGCGGAACTGGCACTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACTGTGGATCCTTGGAGCCAATGCCTATGCCAGCTGGTGATGGTGGTCGTGCCCATGCCTTATTCGTATCCAAAGACCGCAGGATTCCAAAGATACGGATACAAACTCGTCAATTGGGAAATTTGCTGGATAAACGGATTATCGTTGCGGTTGATTCATGGGATCGTTTGTCTCGATATCCAAACGGTCACTATGTGAGGACAATTGGTGAAATAGGTGATAGGGACACCGAAACAGAG.............................................................................................................................................................................................................................................................................GTGGTACTAATAGAGAATGATATAGATGCCAGGCCATTTTCTGCCCAAGTGTTGGCGTGCTTGCCACCATTACCTTGGTCTGTGTCTTCTCAAGATTTGACAAATCCTATTAGACAGGATTTGCGTCACCTGCGTGTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E262318" ref_strand="+" ref_description="SGN-E262318 [cLEG-56-N21]">
      <seq>aggaaatgaaaccttctcgtccaactggatgtgttgttggtatcataaagcggaactggcactcttactgtggatccttggagcctatgcctatgccagctggtgatggtggtcgtgcccatgccttatttgtatccaaagaccgcagaattccgaagatacggatacaaactcgtcaattgggaaatttgctggataaacggattattgttgcggttgattcatgggatcgtttgtcccgatatccaactggtcactatgtgaggactattggtgaaataggtgatagggacaccgaaacagaggtggtactaatagagaatgatatagatgccaggccattttctgcccaagtgttggcgtgcttgccaccattaccttggttggtgtcttctcaagatttgacaaatccgattagacaggatttgcgtcacctgcgtgtatgtagtgtggaccctcctggatgcagagatattgatgatgcattgcattgtatgcctctttcaaatggaaattttgaagtgggagttcatattgccgatgtcacaaattttgttcatcctggaactccactcgatgatgaggcttcacaaaggggcacttctgtatatcttgtagagcgtagaatcgacatgcttccaaaacctcttacagaagatatttgttcacttcgttctgatgttgaaagactagctttctcagttatctgggaaatgacacctgatgctgangttatttctacagatacactaaaagtgtgattaaatcatgtgcagcattatcctatgtc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="+" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="99921" stop="104432"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="100221" g_stop="100284" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="64" r_length="64" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="100285" i_stop="101493" i_length="1209">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="101494" g_stop="101734" g_length="241"/>
          <reference_exon_boundary r_type="cDNA" r_start="65" r_stop="305" r_length="241" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="101735" i_stop="102003" i_length="269">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="102004" g_stop="102160" g_length="157"/>
          <reference_exon_boundary r_type="cDNA" r_start="306" r_stop="462" r_length="157" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="102161" i_stop="102297" i_length="137">
            <donor d_prob="0.941" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="102298" g_stop="102366" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="463" r_stop="531" r_length="69" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="102367" i_stop="103263" i_length="897">
            <donor d_prob="0.900" d_score="1.00"/>
            <acceptor a_prob="0.877" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="103264" g_stop="103389" g_length="126"/>
          <reference_exon_boundary r_type="cDNA" r_start="532" r_stop="657" r_length="126" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="103390" i_stop="103511" i_length="122">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="103512" g_stop="103564" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="658" r_stop="710" r_length="53" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="103565" i_stop="104051" i_length="487">
            <donor d_prob="0.714" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="104052" g_stop="104132" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="711" r_stop="790" r_length="80" r_score="0.975"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="+" ref_id="SGN-E262318" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>791</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E262318" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="100221" e_stop="100284"/>
          <exon e_start="101494" e_stop="101734"/>
          <exon e_start="102004" e_stop="102160"/>
          <exon e_start="102298" e_stop="102366"/>
          <exon e_start="103264" e_stop="103389"/>
          <exon e_start="103512" e_stop="103564"/>
          <exon e_start="104052" e_stop="104132"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGAAATGAAACCTTCTCGTCCAACTGGATGTGTTGTTGGTATCATAAAGCGGAACTGGCACTCGTAAGTTATTGTTTGTTATCTGCTGGCTTTATATGTGTTGTTGTTCTTGTCATTCAGTGTGGTTTTTAGCTTAATTTTAAAGTTATTCTTATCTTCTTTTTTTTTTTTAAAAGCACCTCAAAGGATATTTTGAAATGTGCATGCATTACACAATCATGTTTTCAGAAAATTCAAATAGACATTTCAAGTCTATTTCTGAATATACCTTCAAAACAATTTTCCTTTGTTGGTTCTTACCTGAACAAACACTTGGTCCGTCCAAATAGGTCACCAGCTAGCAACACAGTTTTGGTCATTTAACTTTAGGAACCTTTCAGCTACCATGTTTTGGGTCAAACTTGATTTGTCCATGGCATAGTGTTTGATGGTTTATTCTTCATTTTTTCAAATCGTAAGTCTTTCGAATTCTTTTCTTTCCTTGAAATGGATAAAATGTTTTGGGAATTTTTTACTTTAATCAGGTTGAAAAGCCTGCTATTTTTTTTTTCTAACATGATAGATATTTGTAAAAAATGTCTTTGCCTAATGTTACTGATGAGTCACTCAAACTAAAAACTAATGGGACCCCTTCTTTTACACATTTGAACTACATTTTTATACTTTTGCTTCGTTTGAGCCGTCGTCGCTCTAATGCATAAAAAGGGGGCTAGTGCTTTTTCCCTCAAAGTGTTAGAAAAAATTATTTAATTGTCTTTACCATGAATCATCATGCGTTGGTCATTTCCCCCTAAAACATGTAAAAAGAAATTATATAGAGAGTCATACTTTGCTTGTTGTGATTCCATGTTAAAGCATTCACATCTCACCTAAATCTTAAGCTAAGAGCTTACACCCTCCAGTGCCACTTTTCTTCTTCCTGACGACTGTTCTAAGTATTGCTCCTTTATCGGGACAGTTTAGACACTGCTTCTACATAAGGCACCTTTTCAGGTGTTGGTCGTTCCTCTTGAGACTGTTTATTACCTCTTGTGATAGCTTTACGATTAAGTCGGGCCGAGTTCAATTTCCGAAATCATTTGCAAAGTGGCATGTGGATTAGAGAGTCTGCCTCTTTCAATATGTGGAAATCCTGCAAAAGTTATATGGTCGCTGGAGTCTCTGCACTGTCACTGAACTCTCATACTTTAAATTGCTGTATGCCTGTATCTATTTCCACCAGCAAAGTCTTCTTTTATCTGGTATATAATATTGTATGTTTCATCATTGCAGTTACTGTGGATCCTTGGAGCCTATGCCTATGCCAGCTGGTGATGGTGGTCGTGCCCATGCCTTATTTGTATCCAAAGACCGCAGAATTCCGAAGATACGGATACAAACTCGTCAATTGGGAAATTTGCTGGATAAACGGATTATTGTTGCGGTTGATTCATGGGATCGTTTGTCCCGATATCCAACTGGTCACTATGTGAGGACTATTGGTGAAATAGGTGATAGGGACACCGAAACAGAGGTATGTTTGATATGTCATTCATTGCTCTTTAAATTTGAACAAATTATCCTTCTCCACCTTTTCTGTAATGTAATTTTGAGATTGTTTTAGTTTTTTTGTTGTGGCTTATTGTTGAGTACCTTCTATTAAGTGTTCAAGGCATTGGTGTCCTTTGCTTGTATTGTAGGTACCGATATATTATCTTACATGCTTAAATAATTAGGATTCGATTTATTTCTTGATGATGATGAATAACAGTCCTGACTATATTTGTTCTGTAATAATTTCAGGTGGTACTAATAGAGAATGATATAGATGCCAGGCCATTTTCTGCCCAAGTGTTGGCGTGCTTGCCACCATTACCTTGGTTGGTGTCTTCTCAAGATTTGACAAATCCGATTAGACAGGATTTGCGTCACCTGCGTGTATGTAGTGTGGACCCTCCTGGTATGTTGTCCAAATTATAGTTCTTCTCGTCTTCCATTTAACTGCAGTGCCCACATTTAGTTTGTGTCAGCATAGATGAGATACTTTTTACATGTGATGTCAATCTGAGACAGAATTCTGCTTTTTCTGTGATGCAGGATGCAGAGATATTGATGATGCATTGCATTGTATGCCTCTTTCAAATGGAAATTTTGAAGTGGGAGTTCGTATCCATGTTTATTTTTAAATCTTTTGGCTAGAATTTACAGAACTTTTTTTTGAGTAAAGTAACTTGGTATTAAAACCAGCACTTAGTACTGAAAAAAACAATTTACAAATGGAATAGATACATAATATACCAGATGCGAAACCAATCTTAATGGTGCCTAGGACATCTAGGATTGATTCAGTGTCACTAGAAGAGAAAAGCAAAATGCATTTTAGCTTAATATCCTGTACTGAACTCCTCCTGCCATCAAAACATCTATCATTTCTTCCTTCCAAATAGTCCACCAAATACATGATGGGATGATCCTCTTTACAAAACTTAACACTGATCTCTTTTGCTGATTTCCTTCTTCAAGAGACAGTGATCTCCTTGAATAGGGATGTGATGAGGGTTTTGGTCACATGAGGCTGTTCGAATCATCTTTGGCTTATTTCTGTGTACAACCAGTGTAATGATGGGTATTCATTTGTGATACCATCTCTTATTTCCTTTAATGCTTTCTATCCTCATGATTTTGTACCTAAATATCTTTTCACTTCACAAATTTTGTTGGCCCTAGCTACAATAGTTGTGCACTCCCTTCATACGGGGAAGGACCCTGCTAGACAGACACTTGATTGTGTGGTGTGTAGTGGGTGCGTCTTAGTGTCTTCTTACTATGGAAAAGAAATGAGACAATAGATGATTCTCATTCTCGAAAATCCACTAATTCTCTCTTTTCTTTCGCCTAAACAATTTCATTGCCTCACTCCGCTCGCCTCCAAAAACTTAGTTAGTTCGCCTACAAAACAACCTTTTGTATTCCAGGACTTTTTTGTTATTTATTTATATTTATAAATAAATATATCATCTACATCATGGGAAAGTCTAGTTGTGAGTCTTTAATACATACCAGATATTGCCGATGTCACAAATTTTGTTCATCCTGGAACTCCACTCGATGATGAGGCTTCACAAAGGGGCACTTCTGTATATCTTGTAGAGCGTAGAATCGACATGCTTCCAAAACCTCTTACAGAAGGTAAAATTTACTTTTAGGCACTAGCCTGGACTAGTTTTTGCTTGTCAGATGGCTTGGAGATGGATTTGGATCAATTGTTTTAATGTCTTCAAATGATCTTGTCTTTTTTCTTTACTTGGCAGATATTTGTTCACTTCGTTCTGATGTTGAAAGACTAGCTTTCTCAGTTATCTGGGTATGTGATTAATTTCAGTAGTGATAGCTGATCTTCTATTTCTGACAGGCTTCTTTTCTCTCAAATATCTGCTAATTATCTTTGTTATTTTTCTTTCTAGCTGCATATCTATCTACCTAGAGCTTCGTACAATCCCCCAGTCTGAAGTCAGTATAGTTTTACTAACACGCAGCTTATACAAACCTAGTTACTGGTCAATTATCTAACTGCATTAATTGTCGGTCATTTTGCGATGTTATGTCACATGACTAATCCTTCCATGAGGCAGATAGCTACATATAAGAAGATAGAAACTTAATTGTTGCAGGTTGTTGATGAAATACATTTTTAGCATTCTGGTTGTATGGCTCAATTATACTTGCATCCTATAATAACCTTCATTAGTCCCTATCTGCTTGGTTTTTGCTTGCGTCCACCCCCCACCCACCCCCCCGACAGAAGTTCTATATCTATATTTTCACCTAATGTGCATTTATTTGCCTTTCAGGAAATGACACCTGATGCTGAGGTTATTTCTACAAGATACACTAAAAGTGTGATTAAATCATGTGCAGCATTATCCTATGTC</genome_strand>
        <mrna_strand>AGGAAATGAAACCTTCTCGTCCAACTGGATGTGTTGTTGGTATCATAAAGCGGAACTGGCACTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACTGTGGATCCTTGGAGCCTATGCCTATGCCAGCTGGTGATGGTGGTCGTGCCCATGCCTTATTTGTATCCAAAGACCGCAGAATTCCGAAGATACGGATACAAACTCGTCAATTGGGAAATTTGCTGGATAAACGGATTATTGTTGCGGTTGATTCATGGGATCGTTTGTCCCGATATCCAACTGGTCACTATGTGAGGACTATTGGTGAAATAGGTGATAGGGACACCGAAACAGAG.............................................................................................................................................................................................................................................................................GTGGTACTAATAGAGAATGATATAGATGCCAGGCCATTTTCTGCCCAAGTGTTGGCGTGCTTGCCACCATTACCTTGGTTGGTGTCTTCTCAAGATTTGACAAATCCGATTAGACAGGATTTGCGTCACCTGCGTGTATGTAGTGTGGACCCTCCTG.........................................................................................................................................GATGCAGAGATATTGATGATGCATTGCATTGTATGCCTCTTTCAAATGGAAATTTTGAAGTGGGAGTTC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTGCCGATGTCACAAATTTTGTTCATCCTGGAACTCCACTCGATGATGAGGCTTCACAAAGGGGCACTTCTGTATATCTTGTAGAGCGTAGAATCGACATGCTTCCAAAACCTCTTACAGAAG..........................................................................................................................ATATTTGTTCACTTCGTTCTGATGTTGAAAGACTAGCTTTCTCAGTTATCTGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAATGACACCTGATGCTGANGTTATTTCTAC-AGATACACTAAAAGTGTGATTAAATCATGTGCAGCATTATCCTATGTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E698948" ref_strand="+" ref_description="SGN-E698948 [FA08AD05]">
      <seq>gcttggtgtcttctcaagatttgacaaatccgattagacaggatttgcgtcacctgcgtgtatgtagtgtggaccctcctggatgcagagatattgatgatgcattgcattgtatgcctctttcaaatggaaattttgaagtgggagttcatattgccgatgtcacaaattttgttcatcctggaactccactcgatgatgaggcttcacaaaggggcacttctgtatatcttgtagagcgtacaatcgacatgcttccaaaacctcttacagaagatatttgttcacttcgttctgatgttgaaagactagctttctcagttatctgggaaatgacacctgatgctgaggttatttctacaagatacactaaaagtgtgattaaatcatgtgcagcattatcctatgtcgaggcacaagtgagaatggatgacagtcgcttggtggatccaataacttcagatttacgaaatttgaatgggttagccaagataatgaggcaaagacgcattgataggggtgcactgacacttgcttctgctgaagtcaaatttcagattgatactgaaactcatgaccctcttgatattggaatgtatcacattcgtgaagcaaaccaaatgcttgaggagtttatgcttgctgctaatgttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="+" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="101780" stop="107530"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="102080" g_stop="102160" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="81" r_length="81" r_score="0.988"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="102161" i_stop="102297" i_length="137">
            <donor d_prob="0.941" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="102298" g_stop="102366" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="82" r_stop="150" r_length="69" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="102367" i_stop="103263" i_length="897">
            <donor d_prob="0.900" d_score="1.00"/>
            <acceptor a_prob="0.877" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="103264" g_stop="103389" g_length="126"/>
          <reference_exon_boundary r_type="cDNA" r_start="151" r_stop="276" r_length="126" r_score="0.992"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="103390" i_stop="103511" i_length="122">
            <donor d_prob="0.987" d_score="0.98"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="103512" g_stop="103564" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="277" r_stop="329" r_length="53" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="103565" i_stop="104051" i_length="487">
            <donor d_prob="0.714" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="104052" g_stop="104158" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="330" r_stop="436" r_length="107" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="104159" i_stop="106553" i_length="2395">
            <donor d_prob="0.965" d_score="1.00"/>
            <acceptor a_prob="0.891" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="106554" g_stop="106608" g_length="55"/>
          <reference_exon_boundary r_type="cDNA" r_start="437" r_stop="491" r_length="55" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="106609" i_stop="106717" i_length="109">
            <donor d_prob="0.954" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="106718" g_stop="106817" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="492" r_stop="591" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="106818" i_stop="107167" i_length="350">
            <donor d_prob="0.825" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="107168" g_stop="107230" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="592" r_stop="654" r_length="63" r_score="0.968"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="+" ref_id="SGN-E698948" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>654</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E698948" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="102080" e_stop="102160"/>
          <exon e_start="102298" e_stop="102366"/>
          <exon e_start="103264" e_stop="103389"/>
          <exon e_start="103512" e_stop="103564"/>
          <exon e_start="104052" e_stop="104158"/>
          <exon e_start="106554" e_stop="106608"/>
          <exon e_start="106718" e_stop="106817"/>
          <exon e_start="107168" e_stop="107230"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTTGGTGTCTTCTCAAGATTTGACAAATCCGATTAGACAGGATTTGCGTCACCTGCGTGTATGTAGTGTGGACCCTCCTGGTATGTTGTCCAAATTATAGTTCTTCTCGTCTTCCATTTAACTGCAGTGCCCACATTTAGTTTGTGTCAGCATAGATGAGATACTTTTTACATGTGATGTCAATCTGAGACAGAATTCTGCTTTTTCTGTGATGCAGGATGCAGAGATATTGATGATGCATTGCATTGTATGCCTCTTTCAAATGGAAATTTTGAAGTGGGAGTTCGTATCCATGTTTATTTTTAAATCTTTTGGCTAGAATTTACAGAACTTTTTTTTGAGTAAAGTAACTTGGTATTAAAACCAGCACTTAGTACTGAAAAAAACAATTTACAAATGGAATAGATACATAATATACCAGATGCGAAACCAATCTTAATGGTGCCTAGGACATCTAGGATTGATTCAGTGTCACTAGAAGAGAAAAGCAAAATGCATTTTAGCTTAATATCCTGTACTGAACTCCTCCTGCCATCAAAACATCTATCATTTCTTCCTTCCAAATAGTCCACCAAATACATGATGGGATGATCCTCTTTACAAAACTTAACACTGATCTCTTTTGCTGATTTCCTTCTTCAAGAGACAGTGATCTCCTTGAATAGGGATGTGATGAGGGTTTTGGTCACATGAGGCTGTTCGAATCATCTTTGGCTTATTTCTGTGTACAACCAGTGTAATGATGGGTATTCATTTGTGATACCATCTCTTATTTCCTTTAATGCTTTCTATCCTCATGATTTTGTACCTAAATATCTTTTCACTTCACAAATTTTGTTGGCCCTAGCTACAATAGTTGTGCACTCCCTTCATACGGGGAAGGACCCTGCTAGACAGACACTTGATTGTGTGGTGTGTAGTGGGTGCGTCTTAGTGTCTTCTTACTATGGAAAAGAAATGAGACAATAGATGATTCTCATTCTCGAAAATCCACTAATTCTCTCTTTTCTTTCGCCTAAACAATTTCATTGCCTCACTCCGCTCGCCTCCAAAAACTTAGTTAGTTCGCCTACAAAACAACCTTTTGTATTCCAGGACTTTTTTGTTATTTATTTATATTTATAAATAAATATATCATCTACATCATGGGAAAGTCTAGTTGTGAGTCTTTAATACATACCAGATATTGCCGATGTCACAAATTTTGTTCATCCTGGAACTCCACTCGATGATGAGGCTTCACAAAGGGGCACTTCTGTATATCTTGTAGAGCGTAGAATCGACATGCTTCCAAAACCTCTTACAGAAGGTAAAATTTACTTTTAGGCACTAGCCTGGACTAGTTTTTGCTTGTCAGATGGCTTGGAGATGGATTTGGATCAATTGTTTTAATGTCTTCAAATGATCTTGTCTTTTTTCTTTACTTGGCAGATATTTGTTCACTTCGTTCTGATGTTGAAAGACTAGCTTTCTCAGTTATCTGGGTATGTGATTAATTTCAGTAGTGATAGCTGATCTTCTATTTCTGACAGGCTTCTTTTCTCTCAAATATCTGCTAATTATCTTTGTTATTTTTCTTTCTAGCTGCATATCTATCTACCTAGAGCTTCGTACAATCCCCCAGTCTGAAGTCAGTATAGTTTTACTAACACGCAGCTTATACAAACCTAGTTACTGGTCAATTATCTAACTGCATTAATTGTCGGTCATTTTGCGATGTTATGTCACATGACTAATCCTTCCATGAGGCAGATAGCTACATATAAGAAGATAGAAACTTAATTGTTGCAGGTTGTTGATGAAATACATTTTTAGCATTCTGGTTGTATGGCTCAATTATACTTGCATCCTATAATAACCTTCATTAGTCCCTATCTGCTTGGTTTTTGCTTGCGTCCACCCCCCACCCACCCCCCCGACAGAAGTTCTATATCTATATTTTCACCTAATGTGCATTTATTTGCCTTTCAGGAAATGACACCTGATGCTGAGGTTATTTCTACAAGATACACTAAAAGTGTGATTAAATCATGTGCAGCATTATCCTATGTCGAGGCACAAGTGAGAATGGATGACAGGTGCCCCCATTTGATGTTTCTGTTTACGTTTTGTCTTCTTGGTTATTTTCTGCCTATATCAGATTCTAAAGCGTTATCTCCTCTCAAACATCTTGAACCAAATACATTCTTGTCAGTATTAGGTATGCAGATGGTCCCTCATTAACCACTGTATCCTAGCACTGTGATTTTGCTGGAGGCAATTTATGTTGCCTTTTCCAGTCTATGTTGTTGTTTTTTGCCCTCAGAAATAGGGAAACCTAATCCTTCAAGGTATATAAAGCCTTCAACAAGATCAAATTGGGACCCAGTTTTTGGCACTGAGAGTATGGAGACTTCAACTGTTATAAAAAAGTTTTCAGATGTCTGACAAATTCGTTTCGTTGCCAGTCTTCTGCTGTCTTCCCTCCAATCTGTCTTGTGGTCAATATTTCTCATGATTTTTCATCTCCGAAATCCAGTAATTTCTTCTACTTCTTCTTTCCTTTGTTTCACTGCATCTTCTCTGCGGTGCCTCTTCTTCTGTTTTTTCTTCCCAAAGCAACTTTTAAAAGAAAAAGGAGTGGTGGGAACCTGTTAGTAAAAAAAGTTCAATGAGTTTCCTCTTCTCTCTTTTTTTTCTTTTTTGAAAATGGTCATGTTGTATTTTCAGCATTAAGGTTATGCTGGTGACCTTCGCAAAGGGGAAGAAAAGAATTGAAAAAAAATATTTACAAGGATCGTTATAATTCTACAATCTGTTCTGTTTCCTCTAAACCTTTCTGTTTACACCAAAAATAAAAGGCTACAATACAGCAATACAGTTCCTCTTCTCCTCCCCTCTCTCTTGGACTAGGCTTATTCGATTAGCTGCTTCTTCAAAATCCAGTAATTTTGTTTTTGTAATAGAAGTGGTGTGCGTTCTAGCATTGCATACTAAGTGAACAATGTTACCTTCTTTGGAGCCATAGACTTCCATAACAAATTCCGTGATAGATTAGGATGTTCGCCATTGAGAAACCGTTTTGTATTAGGATTTAAGTTGACACCTCTTCTTCCTTGAAAGGCTGCGTTGAAGACAAAACCATTCATCTTGTGAGAACACTGGTAAAGCAGTATCGAGAGAGGAAGAGAGGCGTATGCATGGTTTGTTATTGACCTAGACTAGAAAAGGCATATGACAAAAGTGGCTAGGGAGGTCTATGATGATGCTTGGAGGCTAGATGTGTACATGTGGCTTACACTAAGGCGATTAAGGACCTGTACAGTGGAGCTAAGAATCGGGTAAGGTCAGTGGGAGGGGACTTGGACCACTTTCCAGTTATGATGGGACTGCACCAGGGATTGACCCTTAAGTCTGTTCCTTTTTGCCTTGGTGATGGATGAACTGATGCGGCACATCCAAGGTGAGGTGCCATGGTATATGTTATTTGCAAACGATGTAGTACTGGGTGATGAGATTCGCAACAGTCTCTTCCCTTTTCTTTCTCTTCCTGATCTGGCTTGTAGTTTTGGCATGTTATGCTTTGTATCCTGTGTGTATCTTAGTAACAAAAGTGAAATACATGAAAGATTGTGGGTATATGATAAGTTCCTTCGTATTGCCTACGTAGGCAATGAACATCTTCATTTCCTCGCAAAAAAAATATGGTTTGCATGAATGATGTCATGTCATGATGTGCTTTTACATTTTAAAACATCCTAAGAGGGGAATTGATTGAGCAGACCCCCTCCCCTCGCCTTCATGCTTAATGGAGAGGCATATGACAGGACTCCTTTCCTTTAGAAAGATGTTAAGATTTCACAAAGATGTTACCTGATCCAAATAAAAAATGTTAAGATTACACAAAGTACAAAATACGTCGGTGGAACTTCCATATCAAAATGTGAAGTTGCTTTGTCTTGCTCAATTTAGAGGTTGGTTAGCATCTGTATCTTGTCCTGCTTGTAGTTTGTGCTGGAGGTTAAGTTTTTGTTTGGGTTTGTGATCAAGTAAATAGCAGCCAGATTAGATGTGTGTTTGTACATGTAGTGAAAATTGAAATTCTAAAGTACCCACAGGCCTAAAACTATTCTTTTTTTTTAAAAAAAAAACAACTAAAAATTTGTTTATTTCAAGGCATCTCACTTTTGATGTAGTCGCAGAAAATAATTCCAAAGTATAAGTTATTTCAACTAAAGGGGCCTTAGATGGTTAGAAGTAAAAATCCACTACTGATGATTGTGGAAGTGGATTTTTGTATGGTCTGACAGGGTGAACCTCTCAATCCGAAAAATACAAATTTATGAGTTTGTTTCCTGTCCAACTTTAAAACTAGTCAGTACTTGCATGTCCGCCTTCTTAAACTTCGAAAGAACTTGTATCTGCAATTTTGTTATTTCAATCATTCTGTAATTCCTAGTTCCCATACTTAACCAGTTATGTTTGTTATTCCAGTCGCTTGGTGGATCCAATAACTTCAGATTTACGAAATTTGAATGGGTTAGCCAAGGTGTTGATCTTGTAATCCTTATTCTCCTTTAATTACTATATCTCAGCTTTGGACTTTCAGCTCTAGTATCAATATATTAAAGGCATTCTAATGAGACCAACTTTTGCAGATAATGAGGCAAAGACGCATTGATAGGGGTGCACTGACACTTGCTTCTGCTGAAGTCAAATTTCAGATTGATACTGAAACTCATGACCCTCTTGATATTGGTATAATCCATCTCTCTCTCTCTCCCTCCGTCCCTCCCTCTCGGTAGCTTATTGTAATTTAGATAAAGGTGCCCAACTACCTGCTTTTGGAAAGCCAAGAATTTTTCTTACAGATCTCCTTGAAAGTATATATTTAAGATTCAGTTTAAGGATCATTTGTTTCAAACTGGTGCAGTATTGTGAAATTAAAATTTCTTAGCTTTGAGCTATTATATCATATCCCTTACCAATGTTTTACACCCACTATTTCAGAGAAAGATTCTGCTATTTTTGTGGGACTGCACATGACATTGTCCTTCTTTAGATTGTTTGAGTAGTCGTGTGAAGTTAATTTTATGTTGTATGTATAGGAATGTATCAGATTCGTGAAGCAAACCAAATGGTTGAGGAGTTTATGCTTGCTGCTAATGTTG</genome_strand>
        <mrna_strand>GCTTGGTGTCTTCTCAAGATTTGACAAATCCGATTAGACAGGATTTGCGTCACCTGCGTGTATGTAGTGTGGACCCTCCTG.........................................................................................................................................GATGCAGAGATATTGATGATGCATTGCATTGTATGCCTCTTTCAAATGGAAATTTTGAAGTGGGAGTTC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTGCCGATGTCACAAATTTTGTTCATCCTGGAACTCCACTCGATGATGAGGCTTCACAAAGGGGCACTTCTGTATATCTTGTAGAGCGTACAATCGACATGCTTCCAAAACCTCTTACAGAAG..........................................................................................................................ATATTTGTTCACTTCGTTCTGATGTTGAAAGACTAGCTTTCTCAGTTATCTGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAATGACACCTGATGCTGAGGTTATTTCTACAAGATACACTAAAAGTGTGATTAAATCATGTGCAGCATTATCCTATGTCGAGGCACAAGTGAGAATGGATGACAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGCTTGGTGGATCCAATAACTTCAGATTTACGAAATTTGAATGGGTTAGCCAAG.............................................................................................................ATAATGAGGCAAAGACGCATTGATAGGGGTGCACTGACACTTGCTTCTGCTGAAGTCAAATTTCAGATTGATACTGAAACTCATGACCCTCTTGATATTG..............................................................................................................................................................................................................................................................................................................................................................GAATGTATCACATTCGTGAAGCAAACCAAATGCTTGAGGAGTTTATGCTTGCTGCTAATGTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E272709" ref_strand="+" ref_description="SGN-E272709 [cLEM-21-G16]">
      <seq>gatgacagtcgcttggtggatccaataacttcagatttacgaaatttgaatgggttagccaagataatgaggcaaagacgcattgataggggtgcactgacacttgcttctgctgaagtcaaatttcagattgatactgaaactcatgaccctcttgatattggaatgtatcagattcgtgaagcaaaccaaatggttgaggagtttatgcttgctgctaatgttgcagttgctgaaaaaatccttaagcattttcctgtctgctcactattaagacgccatccaagcccaaccaaagaaatgcttgagcctcttctccgcacagctgaagcagttggtcttagtttggatgtgacatcatccaaagcattggctgactctctagatcttgccgagggtgacgatccatacttcaacaagctgatccggattctggcaaccagatgcatgacacaggcggtttacttttgtagtggagaccttagtcctcctgaatatcttcattatggtcttgcctctcctctttatactcatttcacctcgcccattagaagatatgctgatgtcatcgtccatcgattgcttgctgcttctttgggaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="+" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="106247" stop="110680"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="106546" g_stop="106608" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="63" r_length="63" r_score="0.952"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="106609" i_stop="106717" i_length="109">
            <donor d_prob="0.954" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="106718" g_stop="106817" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="64" r_stop="163" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="106818" i_stop="107167" i_length="350">
            <donor d_prob="0.825" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="107168" g_stop="107279" g_length="112"/>
          <reference_exon_boundary r_type="cDNA" r_start="164" r_stop="275" r_length="112" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="107280" i_stop="108045" i_length="766">
            <donor d_prob="0.964" d_score="1.00"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="108046" g_stop="108166" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="276" r_stop="396" r_length="121" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="108167" i_stop="110000" i_length="1834">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.958" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="110001" g_stop="110060" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="397" r_stop="456" r_length="60" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="110061" i_stop="110149" i_length="89">
            <donor d_prob="0.432" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="110150" g_stop="110255" g_length="106"/>
          <reference_exon_boundary r_type="cDNA" r_start="457" r_stop="562" r_length="106" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="110256" i_stop="110341" i_length="86">
            <donor d_prob="0.915" d_score="1.00"/>
            <acceptor a_prob="0.803" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="110342" g_stop="110380" g_length="39"/>
          <reference_exon_boundary r_type="cDNA" r_start="563" r_stop="601" r_length="39" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="+" ref_id="SGN-E272709" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>601</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E272709" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="106546" e_stop="106608"/>
          <exon e_start="106718" e_stop="106817"/>
          <exon e_start="107168" e_stop="107279"/>
          <exon e_start="108046" e_stop="108166"/>
          <exon e_start="110001" e_stop="110060"/>
          <exon e_start="110150" e_stop="110255"/>
          <exon e_start="110342" e_stop="110380"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATTCCAGTCGCTTGGTGGATCCAATAACTTCAGATTTACGAAATTTGAATGGGTTAGCCAAGGTGTTGATCTTGTAATCCTTATTCTCCTTTAATTACTATATCTCAGCTTTGGACTTTCAGCTCTAGTATCAATATATTAAAGGCATTCTAATGAGACCAACTTTTGCAGATAATGAGGCAAAGACGCATTGATAGGGGTGCACTGACACTTGCTTCTGCTGAAGTCAAATTTCAGATTGATACTGAAACTCATGACCCTCTTGATATTGGTATAATCCATCTCTCTCTCTCTCCCTCCGTCCCTCCCTCTCGGTAGCTTATTGTAATTTAGATAAAGGTGCCCAACTACCTGCTTTTGGAAAGCCAAGAATTTTTCTTACAGATCTCCTTGAAAGTATATATTTAAGATTCAGTTTAAGGATCATTTGTTTCAAACTGGTGCAGTATTGTGAAATTAAAATTTCTTAGCTTTGAGCTATTATATCATATCCCTTACCAATGTTTTACACCCACTATTTCAGAGAAAGATTCTGCTATTTTTGTGGGACTGCACATGACATTGTCCTTCTTTAGATTGTTTGAGTAGTCGTGTGAAGTTAATTTTATGTTGTATGTATAGGAATGTATCAGATTCGTGAAGCAAACCAAATGGTTGAGGAGTTTATGCTTGCTGCTAATGTTGCAGTTGCTGAAAAAATCCTTAAGCATTTTCCTGTCTGCTCACTATTAAGGTTTGTTGCTGCTGTTACTTAGAAACAAATCCGTCTGTATAGTTTACTTCTTTTACTAATAATATTTTCCTTAACTGGTGTCTAAATTTTCTCGTCTCGTATCTATACCCTGCTATCTGTATAAGTCTCTTTCCGTATCCTTCATGTGCTAAAAAAAGAATGTAATATGATCCTGTCAATCTGAAAGAATTAACTTTTCTAAGATGGTATAATATGTGAGTGCAGGTAATAATGAGAAGTTTTTTGGAGATCTAGCAGTTCGATGAATGCTCACAGGCAGTTATTTAGAGTGATTCCTTGCTCACAAGCATATGTTTATTGAGTTACAAAGTTGTAATTAAGGATAACAATTAAAAAACACACACATGCGAGGCTACATTTCTGTAAGGGCTTCAATTCTTTGAAGGGACGATGACATATTTTTTAAGGGCTTCAGTTTCTTATAGGGGTGATGCTTGTCTAGTATTAACAGGCTTAACATACTCAGTCCACTTTTACATGCAACTCTGCTTCGTCTTCTCCCCTCCTTCACCAACCTGTTCTTTCTGTACAATTTTCATACATCACATAGCTATTCATAGTTGTCTAAGATGGAGCACTAGAGACAGATATGGCGGCTCTAGTCGAATTCCAAGTGTTCCGCTAAACTCGAATTACATGTTATGCCAGAGTTGTGACACTTTGAAATGGCTATAAAAGCTTACATTTGGTACTTCAATTAAATTTGATAATTCTCCAAGATTACATGATGCATTTTCATTTGTAGACGCCATCCAAGCCCAACCAAAGAAATGCTTGAGCCTCTTCTCCGCACAGCTGAAGCAGTTGGTCTTAGTTTGGATGTGACATCATCCAAAGCATTGGCTGACTCTCTAGATCTTGCCGAGGTGAGTTTTGGCTTATTGAACTTGATGTGCATAGTGAAACTTATGAATGAAAGAATGAAGTTTGTTCCTTCCACTATATTTCTGAAGGGGTTTTAGCTATATCAAGTTGTATATTATAGATGAGTTCACAAAGCTGCATGTGTCAACTCATTTTTTGCTTAGCCCGGCCGGCTATTATTGAGCTGAGCTGAGCTGAACAAGCATCGACCTAATTTCAGAATAGCTCGGGTATGGGTTCACTGACCCAGATGATAAACGAGTTTCATCTCTCCGTACAAGCTACATGGAACCCTAGCAGACAAAGCTTCATACAACATTACCTGATATTTCCAGCTACTTCTAATGTGCAGCCGCACAACCTCTTTCTTTATCAGTTCTCATTCATTCTCTTGTTTTGCAGCCACACAACCTCTTTCTTCATCAGTTTCTTATTCATTCTCTCGTTTTTTTTATGAAATAAATAATTTCATTGCTGGCATCAAGTGAATGCATAATAGTAACAAAAGTAGAGTAGCAAAATGAACTTATCACCTCCCTTGCATATCTAGTTGAGAGCTAGTGAGCTTGTAAAATTCAAGAAGGTAACAGGGGAATTTATTGGGGACATATATAACCCAACTATACAACAGCATAAGACAACTAGATTTTAGAGATCGGTAGGTAGTTGATATTCCATCAAAGCATCTCCTATTTATTTCATTCCAGATACTCCAAAAAATAGCAGCAGATATCATCTTCCAGCCAATAATTTTCCCACAACTCCCAACTCTCAAAGCCATCCCTGATATTCTGTGGCTTGACCCAATTGAGTCCAAAAAGTGTGATAAACATAATCCACAAGTCTGCTGCCGCTGGACAGTGTATAAAAAGGTGGTTGTGTGACTCTGCTTCCTTCTCATTTCCTCTCATATTGTGTTTACAATACACTGCTAAAGCGGGATGCTTTGTGCACTGGGCTTTTTGTTGTATTAAAACAATTCATGAGGAATAATTTACTAATCTCTTCTCTTTTTAATTTATTGAAATGGAATGGACTACTAATTTTGCAATTGACTTTTTCGTATCATTCACTTGTATTAAGTTATTATTAGGATACTTGATATTTGCAAGCCATGTTACTTTTTGGCTTAGAGGATTTAAGTTGGTTTGCTAATTTAAGTGCTTTGTCAGTTCATAAATTATTAGGATTTTAATTTCAAATTTGGTTTTCTTTAATTGGAACATAGGGCTTGTGGCAGATCAACTCTATATGTTCAAGCTTTTTGCAGCTTAATGCCAAGCCCCTTCGAATTCTCCAATTAAGCTGAGCTCGAGTAATGGAATTTTAGGCTCAATCTATTTAGATCCTAGCCTTAAATGGAGGCTAGACTAACTCCTACTGTTAAGAATTTCAGTATCATTTTACAACACAATGTGCTCACTATTGACTGTATTTTGCGGCCAAACACAAGGTACTTAATGATGTGTTAAGCTCACAAATGAAGGTAATTTGGCTAAAAATAAGCTGTTTTCTCTTCAAAATAAAAGGAAAATAGCAAGACAGTGGATGAATGCCTTCTCTGATTCTTGTTTCGGCTCTTCTGTTGTTTATTGAAAGATTGCATTGGTCCTTCTCTAAAATACCTGTAATTCTATTGCATACATTTACATAAGTTAATTTGGCTCAAAATTGACGGAAGGACTACTTTTGTGGAAGAATTACCAATCGGGGACTTAATAGCCAAGAAAACACTGCATAGGGTGATGATATTGCACTCCTCAAAGTAGTTAGGGACATCTAGTTCCATTGGTTGCTGTTGTGCATTCATATGCTAACCTTTTATCTTCCCCCTAGGGTGACGATCCATACTTCAACAAGCTGATCCGGATTCTGGCAACCAGATGCATGACACAGGTGTTCCTTTTTGTTGGTTTGACAAATCCCCTACTTCTGAAATATCATGTAATTTCTGAGTTGGTGTTGCTTTTGGTATGCATTTTCAGGCGGTTTACTTTTGTAGTGGAGACCTTAGTCCTCCTGAATATCTTCATTATGGTCTTGCCTCTCCTCTTTATACTCATTTCACCTCGCCCATTAGAAGATATGCTGGTTAGTAAGAGTTACCGTCCATTTATAATGACAAAGTGCAATGGATGTGACCAATTGTGAGCCTCTTTTTCTGTCTTGTCTTGTAGATGTCATCGTCCATCGATTGCTTGCTGCTTCTTTGGGAA</genome_strand>
        <mrna_strand>GATGACAGTCGCTTGGTGGATCCAATAACTTCAGATTTACGAAATTTGAATGGGTTAGCCAAG.............................................................................................................ATAATGAGGCAAAGACGCATTGATAGGGGTGCACTGACACTTGCTTCTGCTGAAGTCAAATTTCAGATTGATACTGAAACTCATGACCCTCTTGATATTG..............................................................................................................................................................................................................................................................................................................................................................GAATGTATCAGATTCGTGAAGCAAACCAAATGGTTGAGGAGTTTATGCTTGCTGCTAATGTTGCAGTTGCTGAAAAAATCCTTAAGCATTTTCCTGTCTGCTCACTATTAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGCCATCCAAGCCCAACCAAAGAAATGCTTGAGCCTCTTCTCCGCACAGCTGAAGCAGTTGGTCTTAGTTTGGATGTGACATCATCCAAAGCATTGGCTGACTCTCTAGATCTTGCCGAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGACGATCCATACTTCAACAAGCTGATCCGGATTCTGGCAACCAGATGCATGACACAG.........................................................................................GCGGTTTACTTTTGTAGTGGAGACCTTAGTCCTCCTGAATATCTTCATTATGGTCTTGCCTCTCCTCTTTATACTCATTTCACCTCGCCCATTAGAAGATATGCTG......................................................................................ATGTCATCGTCCATCGATTGCTTGCTGCTTCTTTGGGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E392689" ref_strand="+" ref_description="SGN-E392689 [TUS-36-J13]">
      <seq>tgttttggcttcaattctttgaatggacgatgacatattttttaagggcttcagtttcttataggggtgatgcttgtctagtattaacaggcttaacatactcagtccacttttacatgcaactctgcttcgtcttctcccctccttcaccaacctgttctttctgtacaattttcatacatcacatagctattcatagttgtctaaaatggattcttttttacagatatggcggctctagtcgaattccaagtgttccgctaaactcgaattacatgttatgccagagttgtgacactttgaaatggctataaaagcttacatttggtacttcaattaaatttgataattctccaagattacatgatgcattttcatttgtagacgccatccaagcccaaccaaagaaatgcttgagcctcttctccgcacagctgaagcagttggtcttagtttggatgtgacatcatccaaagcattggctgactctctagatcttgccgagggtga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="+" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="107368" stop="108470"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="107662" g_stop="108166" g_length="505"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="505" r_length="505" r_score="0.974"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="+" ref_id="SGN-E392689" ref_strand="+">
        <total_alignment_score>0.974</total_alignment_score>
        <cumulative_length_of_scored_exons>505</cumulative_length_of_scored_exons>
        <coverage percentage="0.990" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E392689" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="107662" e_stop="108166"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTAAGGGCTTCAATTCTTTGAAGGGACGATGACATATTTTTTAAGGGCTTCAGTTTCTTATAGGGGTGATGCTTGTCTAGTATTAACAGGCTTAACATACTCAGTCCACTTTTACATGCAACTCTGCTTCGTCTTCTCCCCTCCTTCACCAACCTGTTCTTTCTGTACAATTTTCATACATCACATAGCTATTCATAGTTGTCTAAGATGGAGCACTAGAGACAGATATGGCGGCTCTAGTCGAATTCCAAGTGTTCCGCTAAACTCGAATTACATGTTATGCCAGAGTTGTGACACTTTGAAATGGCTATAAAAGCTTACATTTGGTACTTCAATTAAATTTGATAATTCTCCAAGATTACATGATGCATTTTCATTTGTAGACGCCATCCAAGCCCAACCAAAGAAATGCTTGAGCCTCTTCTCCGCACAGCTGAAGCAGTTGGTCTTAGTTTGGATGTGACATCATCCAAAGCATTGGCTGACTCTCTAGATCTTGCCGAG</genome_strand>
        <mrna_strand>TGTTTTGGCTTCAATTCTTTGAATGGACGATGACATATTTTTTAAGGGCTTCAGTTTCTTATAGGGGTGATGCTTGTCTAGTATTAACAGGCTTAACATACTCAGTCCACTTTTACATGCAACTCTGCTTCGTCTTCTCCCCTCCTTCACCAACCTGTTCTTTCTGTACAATTTTCATACATCACATAGCTATTCATAGTTGTCTAAAATGGATTCTTTTTTACAGATATGGCGGCTCTAGTCGAATTCCAAGTGTTCCGCTAAACTCGAATTACATGTTATGCCAGAGTTGTGACACTTTGAAATGGCTATAAAAGCTTACATTTGGTACTTCAATTAAATTTGATAATTCTCCAAGATTACATGATGCATTTTCATTTGTAGACGCCATCCAAGCCCAACCAAAGAAATGCTTGAGCCTCTTCTCCGCACAGCTGAAGCAGTTGGTCTTAGTTTGGATGTGACATCATCCAAAGCATTGGCTGACTCTCTAGATCTTGCCGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E243553" ref_strand="+" ref_description="SGN-E243553 [cLED-34-I13]">
      <seq>gtaagggcttcaattctttgaagggacgatgacatattttttaagggcttcagtttcttataggggtgatgcttgtctagtattaacaggcttaacatactcagtccacttttacatgcaactctgcttcgtcttctcccctccttcaccaacctgttctttctgtacaattttcatacatcacatagctattcatagttgtctaagatggagcactagagacagatatggcggctctagtcgaattccaagtgttccgctaaactcgaattacatgttatgccagagttgtgacactttgaaatggctataaaagcttacatttggtacttcaattaaatttgataattctccaagattacatgatgcattttcatttgtagacgccatccaagcccaaccaaagaaatgcttgagcctcttctccgcacagctgaagcagttggtcttagtttggatgtgacatcatccaaagcattggctgactctctagatcttgccgagggtgacgatccatacttcaacaagctgatccggattctggcaaccagatgcatgacacaggcggtttacttttgtagtggag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="+" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="107363" stop="110471"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="107663" g_stop="108166" g_length="504"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="504" r_length="504" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108167" i_stop="110000" i_length="1834">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.958" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="110001" g_stop="110060" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="505" r_stop="564" r_length="60" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="110061" i_stop="110149" i_length="89">
            <donor d_prob="0.432" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="110150" g_stop="110171" g_length="22"/>
          <reference_exon_boundary r_type="cDNA" r_start="565" r_stop="586" r_length="22" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="+" ref_id="SGN-E243553" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>586</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E243553" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="107663" e_stop="108166"/>
          <exon e_start="110001" e_stop="110060"/>
          <exon e_start="110150" e_stop="110171"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTAAGGGCTTCAATTCTTTGAAGGGACGATGACATATTTTTTAAGGGCTTCAGTTTCTTATAGGGGTGATGCTTGTCTAGTATTAACAGGCTTAACATACTCAGTCCACTTTTACATGCAACTCTGCTTCGTCTTCTCCCCTCCTTCACCAACCTGTTCTTTCTGTACAATTTTCATACATCACATAGCTATTCATAGTTGTCTAAGATGGAGCACTAGAGACAGATATGGCGGCTCTAGTCGAATTCCAAGTGTTCCGCTAAACTCGAATTACATGTTATGCCAGAGTTGTGACACTTTGAAATGGCTATAAAAGCTTACATTTGGTACTTCAATTAAATTTGATAATTCTCCAAGATTACATGATGCATTTTCATTTGTAGACGCCATCCAAGCCCAACCAAAGAAATGCTTGAGCCTCTTCTCCGCACAGCTGAAGCAGTTGGTCTTAGTTTGGATGTGACATCATCCAAAGCATTGGCTGACTCTCTAGATCTTGCCGAGGTGAGTTTTGGCTTATTGAACTTGATGTGCATAGTGAAACTTATGAATGAAAGAATGAAGTTTGTTCCTTCCACTATATTTCTGAAGGGGTTTTAGCTATATCAAGTTGTATATTATAGATGAGTTCACAAAGCTGCATGTGTCAACTCATTTTTTGCTTAGCCCGGCCGGCTATTATTGAGCTGAGCTGAGCTGAACAAGCATCGACCTAATTTCAGAATAGCTCGGGTATGGGTTCACTGACCCAGATGATAAACGAGTTTCATCTCTCCGTACAAGCTACATGGAACCCTAGCAGACAAAGCTTCATACAACATTACCTGATATTTCCAGCTACTTCTAATGTGCAGCCGCACAACCTCTTTCTTTATCAGTTCTCATTCATTCTCTTGTTTTGCAGCCACACAACCTCTTTCTTCATCAGTTTCTTATTCATTCTCTCGTTTTTTTTATGAAATAAATAATTTCATTGCTGGCATCAAGTGAATGCATAATAGTAACAAAAGTAGAGTAGCAAAATGAACTTATCACCTCCCTTGCATATCTAGTTGAGAGCTAGTGAGCTTGTAAAATTCAAGAAGGTAACAGGGGAATTTATTGGGGACATATATAACCCAACTATACAACAGCATAAGACAACTAGATTTTAGAGATCGGTAGGTAGTTGATATTCCATCAAAGCATCTCCTATTTATTTCATTCCAGATACTCCAAAAAATAGCAGCAGATATCATCTTCCAGCCAATAATTTTCCCACAACTCCCAACTCTCAAAGCCATCCCTGATATTCTGTGGCTTGACCCAATTGAGTCCAAAAAGTGTGATAAACATAATCCACAAGTCTGCTGCCGCTGGACAGTGTATAAAAAGGTGGTTGTGTGACTCTGCTTCCTTCTCATTTCCTCTCATATTGTGTTTACAATACACTGCTAAAGCGGGATGCTTTGTGCACTGGGCTTTTTGTTGTATTAAAACAATTCATGAGGAATAATTTACTAATCTCTTCTCTTTTTAATTTATTGAAATGGAATGGACTACTAATTTTGCAATTGACTTTTTCGTATCATTCACTTGTATTAAGTTATTATTAGGATACTTGATATTTGCAAGCCATGTTACTTTTTGGCTTAGAGGATTTAAGTTGGTTTGCTAATTTAAGTGCTTTGTCAGTTCATAAATTATTAGGATTTTAATTTCAAATTTGGTTTTCTTTAATTGGAACATAGGGCTTGTGGCAGATCAACTCTATATGTTCAAGCTTTTTGCAGCTTAATGCCAAGCCCCTTCGAATTCTCCAATTAAGCTGAGCTCGAGTAATGGAATTTTAGGCTCAATCTATTTAGATCCTAGCCTTAAATGGAGGCTAGACTAACTCCTACTGTTAAGAATTTCAGTATCATTTTACAACACAATGTGCTCACTATTGACTGTATTTTGCGGCCAAACACAAGGTACTTAATGATGTGTTAAGCTCACAAATGAAGGTAATTTGGCTAAAAATAAGCTGTTTTCTCTTCAAAATAAAAGGAAAATAGCAAGACAGTGGATGAATGCCTTCTCTGATTCTTGTTTCGGCTCTTCTGTTGTTTATTGAAAGATTGCATTGGTCCTTCTCTAAAATACCTGTAATTCTATTGCATACATTTACATAAGTTAATTTGGCTCAAAATTGACGGAAGGACTACTTTTGTGGAAGAATTACCAATCGGGGACTTAATAGCCAAGAAAACACTGCATAGGGTGATGATATTGCACTCCTCAAAGTAGTTAGGGACATCTAGTTCCATTGGTTGCTGTTGTGCATTCATATGCTAACCTTTTATCTTCCCCCTAGGGTGACGATCCATACTTCAACAAGCTGATCCGGATTCTGGCAACCAGATGCATGACACAGGTGTTCCTTTTTGTTGGTTTGACAAATCCCCTACTTCTGAAATATCATGTAATTTCTGAGTTGGTGTTGCTTTTGGTATGCATTTTCAGGCGGTTTACTTTTGTAGTGGAG</genome_strand>
        <mrna_strand>GTAAGGGCTTCAATTCTTTGAAGGGACGATGACATATTTTTTAAGGGCTTCAGTTTCTTATAGGGGTGATGCTTGTCTAGTATTAACAGGCTTAACATACTCAGTCCACTTTTACATGCAACTCTGCTTCGTCTTCTCCCCTCCTTCACCAACCTGTTCTTTCTGTACAATTTTCATACATCACATAGCTATTCATAGTTGTCTAAGATGGAGCACTAGAGACAGATATGGCGGCTCTAGTCGAATTCCAAGTGTTCCGCTAAACTCGAATTACATGTTATGCCAGAGTTGTGACACTTTGAAATGGCTATAAAAGCTTACATTTGGTACTTCAATTAAATTTGATAATTCTCCAAGATTACATGATGCATTTTCATTTGTAGACGCCATCCAAGCCCAACCAAAGAAATGCTTGAGCCTCTTCTCCGCACAGCTGAAGCAGTTGGTCTTAGTTTGGATGTGACATCATCCAAAGCATTGGCTGACTCTCTAGATCTTGCCGAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGACGATCCATACTTCAACAAGCTGATCCGGATTCTGGCAACCAGATGCATGACACAG.........................................................................................GCGGTTTACTTTTGTAGTGGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E244506" ref_strand="+" ref_description="SGN-E244506 [cLED-38-G9]">
      <seq>gtaagggcttcaattctttgaagggacgatgacatattttttaagggcttcagtttcttataggggtgatgcttgtctagtattaacaggcttaacatactcagtccacttttacatgcaactctgcttcgtcttctcccctccttcaccaacctgttctttctgtacaattttcatacatcacatagctattcatagttgtctaagatggagcactagagacagatatggcggctctagtcgaattccaagtgttccgctaaactcgaattacatgttatgccagagttgtgacactttgaaatggctataaaagcttacatttggtacttcaattaaatttgataattctccaagattacatgatgcattttcatttgtagacgccatccaagcccaaccaaagaaatgcttgagcctcttctccgcacagctgaagcagttggtcttagtttggatgtgacatcatccaaagcattggctgactctctagatcttgccgagggtgacgatccatacttcaacaagctgatccggattctggcaaccagatgcatgacacaagcggtttacttttgtagtgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="+" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="107363" stop="110469"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="107663" g_stop="108166" g_length="504"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="504" r_length="504" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108167" i_stop="110000" i_length="1834">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.958" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="110001" g_stop="110060" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="505" r_stop="564" r_length="60" r_score="0.983"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="110061" i_stop="110149" i_length="89">
            <donor d_prob="0.432" d_score="0.98"/>
            <acceptor a_prob="0.994" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="110150" g_stop="110169" g_length="20"/>
          <reference_exon_boundary r_type="cDNA" r_start="565" r_stop="584" r_length="20" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="+" ref_id="SGN-E244506" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>584</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E244506" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="107663" e_stop="108166"/>
          <exon e_start="110001" e_stop="110060"/>
          <exon e_start="110150" e_stop="110169"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTAAGGGCTTCAATTCTTTGAAGGGACGATGACATATTTTTTAAGGGCTTCAGTTTCTTATAGGGGTGATGCTTGTCTAGTATTAACAGGCTTAACATACTCAGTCCACTTTTACATGCAACTCTGCTTCGTCTTCTCCCCTCCTTCACCAACCTGTTCTTTCTGTACAATTTTCATACATCACATAGCTATTCATAGTTGTCTAAGATGGAGCACTAGAGACAGATATGGCGGCTCTAGTCGAATTCCAAGTGTTCCGCTAAACTCGAATTACATGTTATGCCAGAGTTGTGACACTTTGAAATGGCTATAAAAGCTTACATTTGGTACTTCAATTAAATTTGATAATTCTCCAAGATTACATGATGCATTTTCATTTGTAGACGCCATCCAAGCCCAACCAAAGAAATGCTTGAGCCTCTTCTCCGCACAGCTGAAGCAGTTGGTCTTAGTTTGGATGTGACATCATCCAAAGCATTGGCTGACTCTCTAGATCTTGCCGAGGTGAGTTTTGGCTTATTGAACTTGATGTGCATAGTGAAACTTATGAATGAAAGAATGAAGTTTGTTCCTTCCACTATATTTCTGAAGGGGTTTTAGCTATATCAAGTTGTATATTATAGATGAGTTCACAAAGCTGCATGTGTCAACTCATTTTTTGCTTAGCCCGGCCGGCTATTATTGAGCTGAGCTGAGCTGAACAAGCATCGACCTAATTTCAGAATAGCTCGGGTATGGGTTCACTGACCCAGATGATAAACGAGTTTCATCTCTCCGTACAAGCTACATGGAACCCTAGCAGACAAAGCTTCATACAACATTACCTGATATTTCCAGCTACTTCTAATGTGCAGCCGCACAACCTCTTTCTTTATCAGTTCTCATTCATTCTCTTGTTTTGCAGCCACACAACCTCTTTCTTCATCAGTTTCTTATTCATTCTCTCGTTTTTTTTATGAAATAAATAATTTCATTGCTGGCATCAAGTGAATGCATAATAGTAACAAAAGTAGAGTAGCAAAATGAACTTATCACCTCCCTTGCATATCTAGTTGAGAGCTAGTGAGCTTGTAAAATTCAAGAAGGTAACAGGGGAATTTATTGGGGACATATATAACCCAACTATACAACAGCATAAGACAACTAGATTTTAGAGATCGGTAGGTAGTTGATATTCCATCAAAGCATCTCCTATTTATTTCATTCCAGATACTCCAAAAAATAGCAGCAGATATCATCTTCCAGCCAATAATTTTCCCACAACTCCCAACTCTCAAAGCCATCCCTGATATTCTGTGGCTTGACCCAATTGAGTCCAAAAAGTGTGATAAACATAATCCACAAGTCTGCTGCCGCTGGACAGTGTATAAAAAGGTGGTTGTGTGACTCTGCTTCCTTCTCATTTCCTCTCATATTGTGTTTACAATACACTGCTAAAGCGGGATGCTTTGTGCACTGGGCTTTTTGTTGTATTAAAACAATTCATGAGGAATAATTTACTAATCTCTTCTCTTTTTAATTTATTGAAATGGAATGGACTACTAATTTTGCAATTGACTTTTTCGTATCATTCACTTGTATTAAGTTATTATTAGGATACTTGATATTTGCAAGCCATGTTACTTTTTGGCTTAGAGGATTTAAGTTGGTTTGCTAATTTAAGTGCTTTGTCAGTTCATAAATTATTAGGATTTTAATTTCAAATTTGGTTTTCTTTAATTGGAACATAGGGCTTGTGGCAGATCAACTCTATATGTTCAAGCTTTTTGCAGCTTAATGCCAAGCCCCTTCGAATTCTCCAATTAAGCTGAGCTCGAGTAATGGAATTTTAGGCTCAATCTATTTAGATCCTAGCCTTAAATGGAGGCTAGACTAACTCCTACTGTTAAGAATTTCAGTATCATTTTACAACACAATGTGCTCACTATTGACTGTATTTTGCGGCCAAACACAAGGTACTTAATGATGTGTTAAGCTCACAAATGAAGGTAATTTGGCTAAAAATAAGCTGTTTTCTCTTCAAAATAAAAGGAAAATAGCAAGACAGTGGATGAATGCCTTCTCTGATTCTTGTTTCGGCTCTTCTGTTGTTTATTGAAAGATTGCATTGGTCCTTCTCTAAAATACCTGTAATTCTATTGCATACATTTACATAAGTTAATTTGGCTCAAAATTGACGGAAGGACTACTTTTGTGGAAGAATTACCAATCGGGGACTTAATAGCCAAGAAAACACTGCATAGGGTGATGATATTGCACTCCTCAAAGTAGTTAGGGACATCTAGTTCCATTGGTTGCTGTTGTGCATTCATATGCTAACCTTTTATCTTCCCCCTAGGGTGACGATCCATACTTCAACAAGCTGATCCGGATTCTGGCAACCAGATGCATGACACAGGTGTTCCTTTTTGTTGGTTTGACAAATCCCCTACTTCTGAAATATCATGTAATTTCTGAGTTGGTGTTGCTTTTGGTATGCATTTTCAGGCGGTTTACTTTTGTAGTGG</genome_strand>
        <mrna_strand>GTAAGGGCTTCAATTCTTTGAAGGGACGATGACATATTTTTTAAGGGCTTCAGTTTCTTATAGGGGTGATGCTTGTCTAGTATTAACAGGCTTAACATACTCAGTCCACTTTTACATGCAACTCTGCTTCGTCTTCTCCCCTCCTTCACCAACCTGTTCTTTCTGTACAATTTTCATACATCACATAGCTATTCATAGTTGTCTAAGATGGAGCACTAGAGACAGATATGGCGGCTCTAGTCGAATTCCAAGTGTTCCGCTAAACTCGAATTACATGTTATGCCAGAGTTGTGACACTTTGAAATGGCTATAAAAGCTTACATTTGGTACTTCAATTAAATTTGATAATTCTCCAAGATTACATGATGCATTTTCATTTGTAGACGCCATCCAAGCCCAACCAAAGAAATGCTTGAGCCTCTTCTCCGCACAGCTGAAGCAGTTGGTCTTAGTTTGGATGTGACATCATCCAAAGCATTGGCTGACTCTCTAGATCTTGCCGAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGACGATCCATACTTCAACAAGCTGATCCGGATTCTGGCAACCAGATGCATGACACAA.........................................................................................GCGGTTTACTTTTGTAGTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E233441" ref_strand="+" ref_description="SGN-E233441 [cLED-9-N9]">
      <seq>gtaagggcttcaattctttgaagggacgatgacatattttttaagggcttcagtttcttataggggtgatgcttgtctagtattaacaggcttaacatactcagtccacttttacatgcaactctgcttcgtcttctcccctccttcaccaacctgttctttctgtacaattttcatacatcacatagctattcatagttgtctaagatggagcactagagacagatatggcggctctagtcgaattccaagtgttccgctaaactcgaattacatgttatgccagagttgtgacactttgaaatggctataaaagcttacatttggtacttcaattaaatttgataattctccaagattacatgatgcattttcatttgtagacgccatccaagcccaaccaaagaaatgcttgagcctcttctccgcacagctgaagcagttggtcttagtttggatgtgacatcatccaaagcattggctgactctctagatcttgccgagggtgacgatccatacttcaacaagctgatccggattctggcaaccagatgcatga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="+" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="107363" stop="110355"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="107663" g_stop="108166" g_length="504"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="504" r_length="504" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108167" i_stop="110000" i_length="1834">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.958" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="110001" g_stop="110055" g_length="55"/>
          <reference_exon_boundary r_type="cDNA" r_start="505" r_stop="559" r_length="55" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="+" ref_id="SGN-E233441" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>559</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E233441" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="107663" e_stop="108166"/>
          <exon e_start="110001" e_stop="110055"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTAAGGGCTTCAATTCTTTGAAGGGACGATGACATATTTTTTAAGGGCTTCAGTTTCTTATAGGGGTGATGCTTGTCTAGTATTAACAGGCTTAACATACTCAGTCCACTTTTACATGCAACTCTGCTTCGTCTTCTCCCCTCCTTCACCAACCTGTTCTTTCTGTACAATTTTCATACATCACATAGCTATTCATAGTTGTCTAAGATGGAGCACTAGAGACAGATATGGCGGCTCTAGTCGAATTCCAAGTGTTCCGCTAAACTCGAATTACATGTTATGCCAGAGTTGTGACACTTTGAAATGGCTATAAAAGCTTACATTTGGTACTTCAATTAAATTTGATAATTCTCCAAGATTACATGATGCATTTTCATTTGTAGACGCCATCCAAGCCCAACCAAAGAAATGCTTGAGCCTCTTCTCCGCACAGCTGAAGCAGTTGGTCTTAGTTTGGATGTGACATCATCCAAAGCATTGGCTGACTCTCTAGATCTTGCCGAGGTGAGTTTTGGCTTATTGAACTTGATGTGCATAGTGAAACTTATGAATGAAAGAATGAAGTTTGTTCCTTCCACTATATTTCTGAAGGGGTTTTAGCTATATCAAGTTGTATATTATAGATGAGTTCACAAAGCTGCATGTGTCAACTCATTTTTTGCTTAGCCCGGCCGGCTATTATTGAGCTGAGCTGAGCTGAACAAGCATCGACCTAATTTCAGAATAGCTCGGGTATGGGTTCACTGACCCAGATGATAAACGAGTTTCATCTCTCCGTACAAGCTACATGGAACCCTAGCAGACAAAGCTTCATACAACATTACCTGATATTTCCAGCTACTTCTAATGTGCAGCCGCACAACCTCTTTCTTTATCAGTTCTCATTCATTCTCTTGTTTTGCAGCCACACAACCTCTTTCTTCATCAGTTTCTTATTCATTCTCTCGTTTTTTTTATGAAATAAATAATTTCATTGCTGGCATCAAGTGAATGCATAATAGTAACAAAAGTAGAGTAGCAAAATGAACTTATCACCTCCCTTGCATATCTAGTTGAGAGCTAGTGAGCTTGTAAAATTCAAGAAGGTAACAGGGGAATTTATTGGGGACATATATAACCCAACTATACAACAGCATAAGACAACTAGATTTTAGAGATCGGTAGGTAGTTGATATTCCATCAAAGCATCTCCTATTTATTTCATTCCAGATACTCCAAAAAATAGCAGCAGATATCATCTTCCAGCCAATAATTTTCCCACAACTCCCAACTCTCAAAGCCATCCCTGATATTCTGTGGCTTGACCCAATTGAGTCCAAAAAGTGTGATAAACATAATCCACAAGTCTGCTGCCGCTGGACAGTGTATAAAAAGGTGGTTGTGTGACTCTGCTTCCTTCTCATTTCCTCTCATATTGTGTTTACAATACACTGCTAAAGCGGGATGCTTTGTGCACTGGGCTTTTTGTTGTATTAAAACAATTCATGAGGAATAATTTACTAATCTCTTCTCTTTTTAATTTATTGAAATGGAATGGACTACTAATTTTGCAATTGACTTTTTCGTATCATTCACTTGTATTAAGTTATTATTAGGATACTTGATATTTGCAAGCCATGTTACTTTTTGGCTTAGAGGATTTAAGTTGGTTTGCTAATTTAAGTGCTTTGTCAGTTCATAAATTATTAGGATTTTAATTTCAAATTTGGTTTTCTTTAATTGGAACATAGGGCTTGTGGCAGATCAACTCTATATGTTCAAGCTTTTTGCAGCTTAATGCCAAGCCCCTTCGAATTCTCCAATTAAGCTGAGCTCGAGTAATGGAATTTTAGGCTCAATCTATTTAGATCCTAGCCTTAAATGGAGGCTAGACTAACTCCTACTGTTAAGAATTTCAGTATCATTTTACAACACAATGTGCTCACTATTGACTGTATTTTGCGGCCAAACACAAGGTACTTAATGATGTGTTAAGCTCACAAATGAAGGTAATTTGGCTAAAAATAAGCTGTTTTCTCTTCAAAATAAAAGGAAAATAGCAAGACAGTGGATGAATGCCTTCTCTGATTCTTGTTTCGGCTCTTCTGTTGTTTATTGAAAGATTGCATTGGTCCTTCTCTAAAATACCTGTAATTCTATTGCATACATTTACATAAGTTAATTTGGCTCAAAATTGACGGAAGGACTACTTTTGTGGAAGAATTACCAATCGGGGACTTAATAGCCAAGAAAACACTGCATAGGGTGATGATATTGCACTCCTCAAAGTAGTTAGGGACATCTAGTTCCATTGGTTGCTGTTGTGCATTCATATGCTAACCTTTTATCTTCCCCCTAGGGTGACGATCCATACTTCAACAAGCTGATCCGGATTCTGGCAACCAGATGCATGA</genome_strand>
        <mrna_strand>GTAAGGGCTTCAATTCTTTGAAGGGACGATGACATATTTTTTAAGGGCTTCAGTTTCTTATAGGGGTGATGCTTGTCTAGTATTAACAGGCTTAACATACTCAGTCCACTTTTACATGCAACTCTGCTTCGTCTTCTCCCCTCCTTCACCAACCTGTTCTTTCTGTACAATTTTCATACATCACATAGCTATTCATAGTTGTCTAAGATGGAGCACTAGAGACAGATATGGCGGCTCTAGTCGAATTCCAAGTGTTCCGCTAAACTCGAATTACATGTTATGCCAGAGTTGTGACACTTTGAAATGGCTATAAAAGCTTACATTTGGTACTTCAATTAAATTTGATAATTCTCCAAGATTACATGATGCATTTTCATTTGTAGACGCCATCCAAGCCCAACCAAAGAAATGCTTGAGCCTCTTCTCCGCACAGCTGAAGCAGTTGGTCTTAGTTTGGATGTGACATCATCCAAAGCATTGGCTGACTCTCTAGATCTTGCCGAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGACGATCCATACTTCAACAAGCTGATCCGGATTCTGGCAACCAGATGCATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E228145" ref_strand="+" ref_description="SGN-E228145 [cLED-2-N14]">
      <seq>gtaagggcttcaattctttgaagggacgatgacatattttttaagggcttcagtttcttataggggtgatgcttgtctagtattaacaggcttaacatactcagtccacttttacatgcaactctgcttcgtcttctcccctccttcaccaacctgttctttctgtacaattttcatacatcacatagctattcatagttgtctaagatggagcactagagacagatatggcggctctagtcgaattccaagtgttccgctaaactcgaattacatgttatgccagagttgtgacactttgaaatggctataaaagcttacatttggtacttcaattaaatttgataattctccaagattacatgatgcattttcatttgtagacgccatccaagcccaaccaaagaaatgcttgagcctcttctccgcacagctgaagcagttggtcttagtttggatgtgacatcatccaaagcattggctgactctctagatcttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="+" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="107363" stop="108461"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="107663" g_stop="108161" g_length="499"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="499" r_length="499" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="+" ref_id="SGN-E228145" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>499</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E228145" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="107663" e_stop="108161"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTAAGGGCTTCAATTCTTTGAAGGGACGATGACATATTTTTTAAGGGCTTCAGTTTCTTATAGGGGTGATGCTTGTCTAGTATTAACAGGCTTAACATACTCAGTCCACTTTTACATGCAACTCTGCTTCGTCTTCTCCCCTCCTTCACCAACCTGTTCTTTCTGTACAATTTTCATACATCACATAGCTATTCATAGTTGTCTAAGATGGAGCACTAGAGACAGATATGGCGGCTCTAGTCGAATTCCAAGTGTTCCGCTAAACTCGAATTACATGTTATGCCAGAGTTGTGACACTTTGAAATGGCTATAAAAGCTTACATTTGGTACTTCAATTAAATTTGATAATTCTCCAAGATTACATGATGCATTTTCATTTGTAGACGCCATCCAAGCCCAACCAAAGAAATGCTTGAGCCTCTTCTCCGCACAGCTGAAGCAGTTGGTCTTAGTTTGGATGTGACATCATCCAAAGCATTGGCTGACTCTCTAGATCTTG</genome_strand>
        <mrna_strand>GTAAGGGCTTCAATTCTTTGAAGGGACGATGACATATTTTTTAAGGGCTTCAGTTTCTTATAGGGGTGATGCTTGTCTAGTATTAACAGGCTTAACATACTCAGTCCACTTTTACATGCAACTCTGCTTCGTCTTCTCCCCTCCTTCACCAACCTGTTCTTTCTGTACAATTTTCATACATCACATAGCTATTCATAGTTGTCTAAGATGGAGCACTAGAGACAGATATGGCGGCTCTAGTCGAATTCCAAGTGTTCCGCTAAACTCGAATTACATGTTATGCCAGAGTTGTGACACTTTGAAATGGCTATAAAAGCTTACATTTGGTACTTCAATTAAATTTGATAATTCTCCAAGATTACATGATGCATTTTCATTTGTAGACGCCATCCAAGCCCAACCAAAGAAATGCTTGAGCCTCTTCTCCGCACAGCTGAAGCAGTTGGTCTTAGTTTGGATGTGACATCATCCAAAGCATTGGCTGACTCTCTAGATCTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E241188" ref_strand="+" ref_description="SGN-E241188 [cLED-26-C3]">
      <seq>gtaagggcttcaattctttgaagggacgatgacatattttttaagggcttcagtttcttataggggtgatgcttgtctagtattaacaggcttaacatactcagtccacttttacatgcaactctgcttcgtcttctcccctccttcaccaacctgttctttctgtacaattttcatacatcacatagctattcatagttgtctaagatggagcactagagacagatatggcggctctagtcgaattccaagtgttccgctaaactcgaattacatgttatgccagagttgtgacactttgaaatggctataaaagcttacatttggtacttcaattaaatttgataattctccaagattacatgatgcattttcatttgtagacgccatccaagcccaaccaaagaaatgcttgagcctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="+" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="107363" stop="108383"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="107663" g_stop="108083" g_length="421"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="421" r_length="421" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="+" ref_id="SGN-E241188" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>421</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E241188" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="107663" e_stop="108083"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTAAGGGCTTCAATTCTTTGAAGGGACGATGACATATTTTTTAAGGGCTTCAGTTTCTTATAGGGGTGATGCTTGTCTAGTATTAACAGGCTTAACATACTCAGTCCACTTTTACATGCAACTCTGCTTCGTCTTCTCCCCTCCTTCACCAACCTGTTCTTTCTGTACAATTTTCATACATCACATAGCTATTCATAGTTGTCTAAGATGGAGCACTAGAGACAGATATGGCGGCTCTAGTCGAATTCCAAGTGTTCCGCTAAACTCGAATTACATGTTATGCCAGAGTTGTGACACTTTGAAATGGCTATAAAAGCTTACATTTGGTACTTCAATTAAATTTGATAATTCTCCAAGATTACATGATGCATTTTCATTTGTAGACGCCATCCAAGCCCAACCAAAGAAATGCTTGAGCCTC</genome_strand>
        <mrna_strand>GTAAGGGCTTCAATTCTTTGAAGGGACGATGACATATTTTTTAAGGGCTTCAGTTTCTTATAGGGGTGATGCTTGTCTAGTATTAACAGGCTTAACATACTCAGTCCACTTTTACATGCAACTCTGCTTCGTCTTCTCCCCTCCTTCACCAACCTGTTCTTTCTGTACAATTTTCATACATCACATAGCTATTCATAGTTGTCTAAGATGGAGCACTAGAGACAGATATGGCGGCTCTAGTCGAATTCCAAGTGTTCCGCTAAACTCGAATTACATGTTATGCCAGAGTTGTGACACTTTGAAATGGCTATAAAAGCTTACATTTGGTACTTCAATTAAATTTGATAATTCTCCAAGATTACATGATGCATTTTCATTTGTAGACGCCATCCAAGCCCAACCAAAGAAATGCTTGAGCCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E236499" ref_strand="+" ref_description="SGN-E236499 [cLED-13-P12]">
      <seq>gtaagggcttcaattctttgaagggacgatgacatattttttaagggcttcagtttcttataggggtgatgcttgtctagtattaacaggcttaacatactcagtccacttttacatgcaactctgcttcgtcttctcccctccttcaccaacctgttctttctgtacaattttcatacatcacatagctattcatagttgtctaagatggagcactagagacagatatggcggctctagtcgaattccaagtgttccgctaaactcgaattacatgttatgccagagttgtgacactttgaaatggctataaaagcttacatttggtacttcaattaaatttgataattctccaagattacatgatgcattttcatttgtagacgccatccaagcccaaccaaagaaatgcttgag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="+" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="107363" stop="108379"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="107663" g_stop="108079" g_length="417"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="417" r_length="417" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="+" ref_id="SGN-E236499" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>417</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E236499" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="107663" e_stop="108079"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTAAGGGCTTCAATTCTTTGAAGGGACGATGACATATTTTTTAAGGGCTTCAGTTTCTTATAGGGGTGATGCTTGTCTAGTATTAACAGGCTTAACATACTCAGTCCACTTTTACATGCAACTCTGCTTCGTCTTCTCCCCTCCTTCACCAACCTGTTCTTTCTGTACAATTTTCATACATCACATAGCTATTCATAGTTGTCTAAGATGGAGCACTAGAGACAGATATGGCGGCTCTAGTCGAATTCCAAGTGTTCCGCTAAACTCGAATTACATGTTATGCCAGAGTTGTGACACTTTGAAATGGCTATAAAAGCTTACATTTGGTACTTCAATTAAATTTGATAATTCTCCAAGATTACATGATGCATTTTCATTTGTAGACGCCATCCAAGCCCAACCAAAGAAATGCTTGAG</genome_strand>
        <mrna_strand>GTAAGGGCTTCAATTCTTTGAAGGGACGATGACATATTTTTTAAGGGCTTCAGTTTCTTATAGGGGTGATGCTTGTCTAGTATTAACAGGCTTAACATACTCAGTCCACTTTTACATGCAACTCTGCTTCGTCTTCTCCCCTCCTTCACCAACCTGTTCTTTCTGTACAATTTTCATACATCACATAGCTATTCATAGTTGTCTAAGATGGAGCACTAGAGACAGATATGGCGGCTCTAGTCGAATTCCAAGTGTTCCGCTAAACTCGAATTACATGTTATGCCAGAGTTGTGACACTTTGAAATGGCTATAAAAGCTTACATTTGGTACTTCAATTAAATTTGATAATTCTCCAAGATTACATGATGCATTTTCATTTGTAGACGCCATCCAAGCCCAACCAAAGAAATGCTTGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E544296" ref_strand="+" ref_description="SGN-E544296 [TUS-66-I22](-)">
      <seq>tccatcgattgcttgctgcttctttgggaatttatcagctacctggtgtgttccaagatagacccaagctaactagtatttctgacaatctaaattatcggcatagaaatgctcagatggccagcagagcatcagtagagctccatactctcattttcttcaggaagcgaccaacagataccgaggcgagaatagttaaaataagatccaatggcttcattgtctttgtgcccaagtatggtattgaagggcctgtatacttgacgtctaaaggggacaatggaggggaatgggtagtcgatgagaaacaacagaaaattagaaagcttgatggaagtgtttcgtatggtgtacttggaacagtgagaattcacatggaagtcgttgagcctcagcctaatcgacctaaactacaacttacccttgtatcagaccgataactttaccaagaaagtggaggtcgatatcatgtatcatgtagtctttattccagtgtgatagttgaattgttctttaacggacatttgtgtatcattagatcgatgcagctccattaaatgcttcaaaaacatttatagttattcttttattatatgtttacataaatgttctaaagtgtaacttacgtggttaccatagactgagatattcagtggtgtatttaggatttcgaaaaaatgtgtgtactattacgaaatgatgcatttaagatataaatttgattgatttgacctttacattcttaaaaaaaaaggaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="+" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="110051" stop="112394"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="110351" g_stop="110437" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="87" r_length="87" r_score="0.989"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="110438" i_stop="111235" i_length="798">
            <donor d_prob="0.990" d_score="0.98"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="111236" g_stop="111317" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="88" r_stop="169" r_length="82" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="111318" i_stop="111398" i_length="81">
            <donor d_prob="0.976" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="111399" g_stop="111464" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="170" r_stop="235" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="111465" i_stop="111578" i_length="114">
            <donor d_prob="0.982" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="111579" g_stop="112100" g_length="522"/>
          <reference_exon_boundary r_type="cDNA" r_start="236" r_stop="758" r_length="523" r_score="0.979"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="+" ref_id="SGN-E544296" ref_strand="+">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>757</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E544296" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="110351" e_stop="110437"/>
          <exon e_start="111236" e_stop="111317"/>
          <exon e_start="111399" e_stop="111464"/>
          <exon e_start="111579" e_stop="112100"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCATCGATTGCTTGCTGCTTCTTTGGGAATTTATCAGCTTCCTGGTGTGTTCCAAGATAGACCCAAGCTAACTAGTATTTCTGACAGTAAGTATTGCTTTTCATTATGCTTGACATTACGTTTTAAATGCATTAGACTTCTTGTGGATGGGGAGTATATGAGCTTGTTCTTGATTATTGCTTTTATGCTTTTGGTTGTGTCATCTGTCCAGAGGTATCAGAAGAAGTTTGTATTAATGTTTTTACGCTTTTTTTCCTCCACTGAGAATGAAAAGTGGAGACTTGGGATTGAACGTGTCTGTTAGTTTCGAGGTTTTTACTTGGCAATAATTTTGAGTATTTTTGGCCCCCTAGGGCTTCGGTCTAGTGGTTAGAGCACTATTGGGTAATGCGTGGGTTAGACGTACGCCACAGATTTGAACTTGCTGCAGACAAAACATGGTATTTAATCGGAGAAGGGTGGAGGTCCATTATCCCATCGAGTTTTGATTCGTGCACCACTGTCACTGGAGGATTTCTCAGTTATCAATAGAACTTGAGTACTTCTGTTATAGCCCATCTGTTCAAAGTAAATAATCGATTGAACAAGCTTTCTAGTATATATGTATTGCTGAACTTCGGACATAAAGGGTTAAAACTTATAAGGGAACTTCTGTTCAGACCTAGTTTTCACTCTCATCAACATTTACTATTTATGGCAGTGTGGTTTTTTTTTACTGAATGACATGTGAAAAGGATATAAGAAAAAGAATTACCCTGTACGCACCCAAAGGGTAACGGCTGCGGGTTTCCTTTGTCATAAAAAAAAAGAAAAAAAGTAATAGAAATCGTTGTCTAATTTCACATTTTATGTGGTTATGTTTGCTCATTCCTGTTCCAAAACAGATCTAAATTATCGGCATAGAAATGCTCAGATGGCCAGCAGAGCATCAGTAGAGCTCCATACTCTCATTTTCTTCAGGAAGCGGTATGAAGAACATCTTCTTGGTTTATCTCCCTTTATGTCTTCCATACTCTTCTCATTTTTTACTTTTCCATTCTTGTGCAGACCAACAGATACCGAGGCGAGAATAGTTAAAATAAGATCCAATGGCTTCATTGTCTTTGTGCCCAAGTAAGTTATCCCTTAGTTGTTGTTTCTTCATTTAGAGAGCAAAAGTTAACTATACAAGTTGATGGATTTCCTCTTGCATCAGTTTAGCTCATCGATTATTGTATACCTTTCCAGGTATGGTATTGAAGGGCCTGTATACTTGACGTCTAAAGGGGACAATGGAGGGGAATGGGTAGTCGATGAGAAACAACAGAAAATTAGAAAGCTTGATGGAAGTGTTTCGTATGGTGTACTTGGAACAGTGAGAATTCACATGGAAGTCGTTGAGCCTCAGCCTAATCGACCTAAACTACAACTTACCCTTGTATCAGACCGATAACTTTACCAAGAAAGTGGAGGTCGATATCATGTATCATGTAGTCTTTATTCCAGTGTGATAGTTGAATTGTTCTTTAACGGACATTTGTGTATCATTAGATCGATGCAGCTCCATTAAATGCTTCAAAAACATTTATAGTTATTCTTTTATTATATG-TTACATAAATGTTCTAAAGTGTAACTTACGTGGTTACCATAGACTGAGATATTCAGTGGTGTATTTAGG-TTTCGAAAAAATGTGTGTACTATTACGAAATGATGCATTTAAGATATAAATTTGATTGATTTGACCTTTACATTCTTAATATTAAACTGTTA</genome_strand>
        <mrna_strand>TCCATCGATTGCTTGCTGCTTCTTTGGGAATTTATCAGCTACCTGGTGTGTTCCAAGATAGACCCAAGCTAACTAGTATTTCTGACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTAAATTATCGGCATAGAAATGCTCAGATGGCCAGCAGAGCATCAGTAGAGCTCCATACTCTCATTTTCTTCAGGAAGCG.................................................................................ACCAACAGATACCGAGGCGAGAATAGTTAAAATAAGATCCAATGGCTTCATTGTCTTTGTGCCCAA..................................................................................................................GTATGGTATTGAAGGGCCTGTATACTTGACGTCTAAAGGGGACAATGGAGGGGAATGGGTAGTCGATGAGAAACAACAGAAAATTAGAAAGCTTGATGGAAGTGTTTCGTATGGTGTACTTGGAACAGTGAGAATTCACATGGAAGTCGTTGAGCCTCAGCCTAATCGACCTAAACTACAACTTACCCTTGTATCAGACCGATAACTTTACCAAGAAAGTGGAGGTCGATATCATGTATCATGTAGTCTTTATTCCAGTGTGATAGTTGAATTGTTCTTTAACGGACATTTGTGTATCATTAGATCGATGCAGCTCCATTAAATGCTTCAAAAACATTTATAGTTATTCTTTTATTATATGTTTACATAAATGTTCTAAAGTGTAACTTACGTGGTTACCATAGACTGAGATATTCAGTGGTGTATTTAGGATTTCGAAAAAATGTGTGTACTATTACGAAATGATGCATTTAAGATATAAATTTGATTGATTTGACCTTTACATTCTTAA-AAAAAAAGGAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E242597" ref_strand="-" ref_description="SGN-E242597 [cLED-30-H14]">
      <seq>aatctaaattatcggcataaaaatgctcagatggccagcagagcatcagtagagctccatactctcattttcttcaggaagcgaccaacagataccgaggcgagaatagttaaaataagatccaatggcttcattgtctttgtgcccaagtatggtattgaagggcctgtatacttgacgtctaaaggggacaatggaggggaatgggtagtcgatgagaaacaacagaaaattagaaagcttgatggaagtgtttcgtatggtgtacttggaacagtgagaattcacatggaagtcgttgagcctcagcctaatcgacctaaactacaacttacccttgtatcagaccgataactttaccaagaaagtggaggtcgatatcatgtatcatgtagtctttattccagtgtgatagttgaattgttctttaacggacatttgtgtatcattagatcgatgcagctccattaaatgcttcaaaaacatttatagttattcttttattatatgtttacataaatgttctaaagtgtaacttacgtggttaccatagactgagatattcagtggtgtatttaggatttcgaaaaaatgtgtgtactattacgaaatgatgcatttaagatataaatttgattgatttgacctttaaaaaaaaaaaaaaaaaaactc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="+" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="110936" stop="112380"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="111167" g_stop="111167" g_length="1"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="1" r_length="1" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="111168" i_stop="111235" i_length="68">
            <donor d_prob="0.725" d_score="0.00"/>
            <acceptor a_prob="0.995" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="111236" g_stop="111317" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="2" r_stop="83" r_length="82" r_score="0.988"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="111318" i_stop="111398" i_length="81">
            <donor d_prob="0.976" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="111399" g_stop="111464" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="84" r_stop="149" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="111465" i_stop="111578" i_length="114">
            <donor d_prob="0.982" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="111579" g_stop="112079" g_length="501"/>
          <reference_exon_boundary r_type="cDNA" r_start="150" r_stop="652" r_length="503" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="653" polyA_stop="670"/>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="+" ref_id="SGN-E242597" ref_strand="-">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>650</cumulative_length_of_scored_exons>
        <coverage percentage="0.967" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E242597" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="111167" e_stop="111167"/>
          <exon e_start="111236" e_stop="111317"/>
          <exon e_start="111399" e_stop="111464"/>
          <exon e_start="111579" e_stop="112079"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTAATAGAAATCGTTGTCTAATTTCACATTTTATGTGGTTATGTTTGCTCATTCCTGTTCCAAAACAGATCTAAATTATCGGCATAGAAATGCTCAGATGGCCAGCAGAGCATCAGTAGAGCTCCATACTCTCATTTTCTTCAGGAAGCGGTATGAAGAACATCTTCTTGGTTTATCTCCCTTTATGTCTTCCATACTCTTCTCATTTTTTACTTTTCCATTCTTGTGCAGACCAACAGATACCGAGGCGAGAATAGTTAAAATAAGATCCAATGGCTTCATTGTCTTTGTGCCCAAGTAAGTTATCCCTTAGTTGTTGTTTCTTCATTTAGAGAGCAAAAGTTAACTATACAAGTTGATGGATTTCCTCTTGCATCAGTTTAGCTCATCGATTATTGTATACCTTTCCAGGTATGGTATTGAAGGGCCTGTATACTTGACGTCTAAAGGGGACAATGGAGGGGAATGGGTAGTCGATGAGAAACAACAGAAAATTAGAAAGCTTGATGGAAGTGTTTCGTATGGTGTACTTGGAACAGTGAGAATTCACATGGAAGTCGTTGAGCCTCAGCCTAATCGACCTAAACTACAACTTACCCTTGTATCAGACCGATAACTTTACCAAGAAAGTGGAGGTCGATATCATGTATCATGTAGTCTTTATTCCAGTGTGATAGTTGAATTGTTCTTTAACGGACATTTGTGTATCATTAGATCGATGCAGCTCCATTAAATGCTTCAAAAACATTTATAGTTATTCTTTTATTATATG-TTACATAAATGTTCTAAAGTGTAACTTACGTGGTTACCATAGACTGAGATATTCAGTGGTGTATTTAGG-TTTCGAAAAAATGTGTGTACTATTACGAAATGATGCATTTAAGATATAAATTTGATTGATTTGACCTTTAC</genome_strand>
        <mrna_strand>A....................................................................ATCTAAATTATCGGCATAAAAATGCTCAGATGGCCAGCAGAGCATCAGTAGAGCTCCATACTCTCATTTTCTTCAGGAAGCG.................................................................................ACCAACAGATACCGAGGCGAGAATAGTTAAAATAAGATCCAATGGCTTCATTGTCTTTGTGCCCAA..................................................................................................................GTATGGTATTGAAGGGCCTGTATACTTGACGTCTAAAGGGGACAATGGAGGGGAATGGGTAGTCGATGAGAAACAACAGAAAATTAGAAAGCTTGATGGAAGTGTTTCGTATGGTGTACTTGGAACAGTGAGAATTCACATGGAAGTCGTTGAGCCTCAGCCTAATCGACCTAAACTACAACTTACCCTTGTATCAGACCGATAACTTTACCAAGAAAGTGGAGGTCGATATCATGTATCATGTAGTCTTTATTCCAGTGTGATAGTTGAATTGTTCTTTAACGGACATTTGTGTATCATTAGATCGATGCAGCTCCATTAAATGCTTCAAAAACATTTATAGTTATTCTTTTATTATATGTTTACATAAATGTTCTAAAGTGTAACTTACGTGGTTACCATAGACTGAGATATTCAGTGGTGTATTTAGGATTTCGAAAAAATGTGTGTACTATTACGAAATGATGCATTTAAGATATAAATTTGATTGATTTGACCTTTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E392688" ref_strand="+" ref_description="SGN-E392688 [TUS-36-J13](-)">
      <seq>tgtctttgtgcccaattttggtttttgaagggcttgtcttctggacgtctaaaggggacaatggaggggaatgggtagtcgatgagaacccccagaaaattagaaagcttgatggaagtgtttcgtatggtgtacttggaacagtgagaattcacatggaagtcgttgagcctcagcctaatcgacctaaactacaacttaaccttgtatcagaccgataactttaccaagaaagtggaggtcgatatcatgtatcatgtagtctttattccagtgtgatagttgaattgttctttaacggacatttgtgtatcattagatcgatgcagctccattaaatgcttcaaaaacatttatagttattcttttattatatgtttacataaatgttctaaagtgtaacttacgtggttaccatagactgagatattcagtggtgtatttaggatttcgaaaaaatgtgtgtactattacgaaatgatgcatttaagttaaaagtgtgattgatttgacctttacattcttaatattaaacaaggatttttaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="+" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="111275" stop="112395"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="111450" g_stop="111464" g_length="15"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="15" r_length="15" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="111465" i_stop="111578" i_length="114">
            <donor d_prob="0.982" d_score="0.00"/>
            <acceptor a_prob="0.993" a_score="0.82"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="111579" g_stop="112114" g_length="536"/>
          <reference_exon_boundary r_type="cDNA" r_start="16" r_stop="554" r_length="539" r_score="0.944"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="+" ref_id="SGN-E392688" ref_strand="+">
        <total_alignment_score>0.944</total_alignment_score>
        <cumulative_length_of_scored_exons>551</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E392688" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="111450" e_stop="111464"/>
          <exon e_start="111579" e_stop="112114"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTCTTTGTGCCCAAGTAAGTTATCCCTTAGTTGTTGTTTCTTCATTTAGAGAGCAAAAGTTAACTATACAAGTTGATGGATTTCCTCTTGCATCAGTTTAGCTCATCGATTATTGTATACCTTTCCAGGTATGG-TATTGAAGGGCCTGTATACTTGACGTCTAAAGGGGACAATGGAGGGGAATGGGTAGTCGATGAGAAACAACAGAAAATTAGAAAGCTTGATGGAAGTGTTTCGTATGGTGTACTTGGAACAGTGAGAATTCACATGGAAGTCGTTGAGCCTCAGCCTAATCGACCTAAACTACAACTTACCCTTGTATCAGACCGATAACTTTACCAAGAAAGTGGAGGTCGATATCATGTATCATGTAGTCTTTATTCCAGTGTGATAGTTGAATTGTTCTTTAACGGACATTTGTGTATCATTAGATCGATGCAGCTCCATTAAATGCTTCAAAAACATTTATAGTTATTCTTTTATTATATG-TTACATAAATGTTCTAAAGTGTAACTTACGTGGTTACCATAGACTGAGATATTCAGTGGTGTATTTAGG-TTTCGAAAAAATGTGTGTACTATTACGAAATGATGCATTTAAGATATAAATTTGATTGATTTGACCTTTACATTCTTAATATTAAACTGTTAATTTTTTAAAATTA</genome_strand>
        <mrna_strand>TGTCTTTGTGCCCAA..................................................................................................................TTTTGGTTTTTGAAGGGCTTGTCTTCTGGACGTCTAAAGGGGACAATGGAGGGGAATGGGTAGTCGATGAGAACCCCCAGAAAATTAGAAAGCTTGATGGAAGTGTTTCGTATGGTGTACTTGGAACAGTGAGAATTCACATGGAAGTCGTTGAGCCTCAGCCTAATCGACCTAAACTACAACTTAACCTTGTATCAGACCGATAACTTTACCAAGAAAGTGGAGGTCGATATCATGTATCATGTAGTCTTTATTCCAGTGTGATAGTTGAATTGTTCTTTAACGGACATTTGTGTATCATTAGATCGATGCAGCTCCATTAAATGCTTCAAAAACATTTATAGTTATTCTTTTATTATATGTTTACATAAATGTTCTAAAGTGTAACTTACGTGGTTACCATAGACTGAGATATTCAGTGGTGTATTTAGGATTTCGAAAAAATGTGTGTACTATTACGAAATGATGCATTTAAGTTAAAAGTGTGATTGATTTGACCTTTACATTCTTAATATTAAACAAGGATTTTTAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E257634" ref_strand="-" ref_description="SGN-E257634 [cLEG-45-L24]">
      <seq>taaaggggacaatgaaggggaatgggtagtcgatgagaaacaacagaaaattagaaagcttgatggaagtgtttcgtatggtgtacttggaacagtgagaattcacatggaagtcgttgagcctcagcctaatcgacctaaactacaacttacccttgtatcagaccgataactttaccaagaaagtggaggtcgatatcatgtatcatgtagtctttattccagtgtgatagttgaattgttctttaacggacatttgtgtatcattagatcgatgcagctccattaaatgcttcaaaaacatttatagttattcttttattatatgtttacataaatgttctaaagtgtaacttacgtggttaccatagactgagatattcagtggtgtatttaggatttcgaaaaaatgtgtgtactattacgaaatgatgcatttaagatataaatttgattgatttgacctttacattcttaaaaaaaaaaaaaaaaaaactcgagactag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="+" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="111312" stop="112394"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="111612" g_stop="112086" g_length="475"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="477" r_length="477" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="478" polyA_stop="496"/>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="+" ref_id="SGN-E257634" ref_strand="-">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>475</cumulative_length_of_scored_exons>
        <coverage percentage="0.939" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E257634" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="111612" e_stop="112086"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAAGGGGACAATGGAGGGGAATGGGTAGTCGATGAGAAACAACAGAAAATTAGAAAGCTTGATGGAAGTGTTTCGTATGGTGTACTTGGAACAGTGAGAATTCACATGGAAGTCGTTGAGCCTCAGCCTAATCGACCTAAACTACAACTTACCCTTGTATCAGACCGATAACTTTACCAAGAAAGTGGAGGTCGATATCATGTATCATGTAGTCTTTATTCCAGTGTGATAGTTGAATTGTTCTTTAACGGACATTTGTGTATCATTAGATCGATGCAGCTCCATTAAATGCTTCAAAAACATTTATAGTTATTCTTTTATTATATG-TTACATAAATGTTCTAAAGTGTAACTTACGTGGTTACCATAGACTGAGATATTCAGTGGTGTATTTAGG-TTTCGAAAAAATGTGTGTACTATTACGAAATGATGCATTTAAGATATAAATTTGATTGATTTGACCTTTACATTCTTA</genome_strand>
        <mrna_strand>TAAAGGGGACAATGAAGGGGAATGGGTAGTCGATGAGAAACAACAGAAAATTAGAAAGCTTGATGGAAGTGTTTCGTATGGTGTACTTGGAACAGTGAGAATTCACATGGAAGTCGTTGAGCCTCAGCCTAATCGACCTAAACTACAACTTACCCTTGTATCAGACCGATAACTTTACCAAGAAAGTGGAGGTCGATATCATGTATCATGTAGTCTTTATTCCAGTGTGATAGTTGAATTGTTCTTTAACGGACATTTGTGTATCATTAGATCGATGCAGCTCCATTAAATGCTTCAAAAACATTTATAGTTATTCTTTTATTATATGTTTACATAAATGTTCTAAAGTGTAACTTACGTGGTTACCATAGACTGAGATATTCAGTGGTGTATTTAGGATTTCGAAAAAATGTGTGTACTATTACGAAATGATGCATTTAAGATATAAATTTGATTGATTTGACCTTTACATTCTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E231751" ref_strand="+" ref_description="SGN-E231751 [cLED-4-H4]">
      <seq>caatggaggggaatgggtagtcgatgagaaacaacagaaaattagaaagcttgatggaagtgtttcgtatggtgtacttggaacagtgagaattcacatggaagtcgttgagcctcagcctaatcgacctaaactacaacttacccttgtatcagaccgataactttaccaagaaagtggaggtcgatatcatgtatcatgtagtctttattccagtgtgatagttgaattgttctttaacggacatttgtgtatcattagatcgatgcagctccattaaatgcttcaaaaacatttatagttattcttttattatatgtttacataaatgttctaaagtgtaacttacgtggttaccatagactgagatattcagtggtgtatttaggatttcgaaaaaatgtgtgtactattacgaaatgatgcatttaagatataaatttgattgatttgacctttaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="+" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="111321" stop="112380"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="111621" g_stop="112088" g_length="468"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="470" r_length="470" r_score="0.976"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="+" ref_id="SGN-E231751" ref_strand="+">
        <total_alignment_score>0.976</total_alignment_score>
        <cumulative_length_of_scored_exons>468</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E231751" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="111621" e_stop="112088"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAATGGAGGGGAATGGGTAGTCGATGAGAAACAACAGAAAATTAGAAAGCTTGATGGAAGTGTTTCGTATGGTGTACTTGGAACAGTGAGAATTCACATGGAAGTCGTTGAGCCTCAGCCTAATCGACCTAAACTACAACTTACCCTTGTATCAGACCGATAACTTTACCAAGAAAGTGGAGGTCGATATCATGTATCATGTAGTCTTTATTCCAGTGTGATAGTTGAATTGTTCTTTAACGGACATTTGTGTATCATTAGATCGATGCAGCTCCATTAAATGCTTCAAAAACATTTATAGTTATTCTTTTATTATATG-TTACATAAATGTTCTAAAGTGTAACTTACGTGGTTACCATAGACTGAGATATTCAGTGGTGTATTTAGG-TTTCGAAAAAATGTGTGTACTATTACGAAATGATGCATTTAAGATATAAATTTGATTGATTTGACCTTTACATTCTTAAT</genome_strand>
        <mrna_strand>CAATGGAGGGGAATGGGTAGTCGATGAGAAACAACAGAAAATTAGAAAGCTTGATGGAAGTGTTTCGTATGGTGTACTTGGAACAGTGAGAATTCACATGGAAGTCGTTGAGCCTCAGCCTAATCGACCTAAACTACAACTTACCCTTGTATCAGACCGATAACTTTACCAAGAAAGTGGAGGTCGATATCATGTATCATGTAGTCTTTATTCCAGTGTGATAGTTGAATTGTTCTTTAACGGACATTTGTGTATCATTAGATCGATGCAGCTCCATTAAATGCTTCAAAAACATTTATAGTTATTCTTTTATTATATGTTTACATAAATGTTCTAAAGTGTAACTTACGTGGTTACCATAGACTGAGATATTCAGTGGTGTATTTAGGATTTCGAAAAAATGTGTGTACTATTACGAAATGATGCATTTAAGATATAAATTTGATTGATTTGACCTTTAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E349862" ref_strand="+" ref_description="SGN-E349862 [cTOS-3-N3]">
      <seq>agcctaatcgacctaaactacaacttacccttgtatcagaccgataactttaccaagaaagtggaggtcaatatcatgtatcatgtagtctttattccagtgtgatacttgaattgttctttaacggacatttgtgtatcattacatcgatgcagctccattaaatgcttcaaaaacatttatagttattcttttattatatgtttacataaatgttctaaagtgtaacttacgtggttaccatagactgatatattcactggtgtatttaggatttctaaaaaatgtgtgtactattacgaaatgatgcatttaagatataaatttgattgatttgacctttaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="+" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="111437" stop="112380"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="111737" g_stop="112080" g_length="344"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="346" r_length="346" r_score="0.968"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="+" ref_id="SGN-E349862" ref_strand="+">
        <total_alignment_score>0.968</total_alignment_score>
        <cumulative_length_of_scored_exons>344</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E349862" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="111737" e_stop="112080"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCCTAATCGACCTAAACTACAACTTACCCTTGTATCAGACCGATAACTTTACCAAGAAAGTGGAGGTCGATATCATGTATCATGTAGTCTTTATTCCAGTGTGATAGTTGAATTGTTCTTTAACGGACATTTGTGTATCATTAGATCGATGCAGCTCCATTAAATGCTTCAAAAACATTTATAGTTATTCTTTTATTATATG-TTACATAAATGTTCTAAAGTGTAACTTACGTGGTTACCATAGACTGAGATATTCAGTGGTGTATTTAGG-TTTCGAAAAAATGTGTGTACTATTACGAAATGATGCATTTAAGATATAAATTTGATTGATTTGACCTTTACA</genome_strand>
        <mrna_strand>AGCCTAATCGACCTAAACTACAACTTACCCTTGTATCAGACCGATAACTTTACCAAGAAAGTGGAGGTCAATATCATGTATCATGTAGTCTTTATTCCAGTGTGATACTTGAATTGTTCTTTAACGGACATTTGTGTATCATTACATCGATGCAGCTCCATTAAATGCTTCAAAAACATTTATAGTTATTCTTTTATTATATGTTTACATAAATGTTCTAAAGTGTAACTTACGTGGTTACCATAGACTGATATATTCACTGGTGTATTTAGGATTTCTAAAAAATGTGTGTACTATTACGAAATGATGCATTTAAGATATAAATTTGATTGATTTGACCTTTAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E237770" ref_strand="+" ref_description="SGN-E237770 [cLED-18-C1]">
      <seq>ggaagtccatttggtgatcataaaacttgtgcttctgttggcctttcgtatgcatctttctcaatggcccttggaggtttctacatttggacattcacttatcagctaataagaaattcatccttgaaattcaaatcactaaaaacagcagaggaaaacgaagcgttcaagggaccaaatgtggactcagagacaaatgaaaagtcttgccttctcgacaacaattctcaagatcaacttcctattagtaccacaaaaacaactgaaaatcaaacagtagaagtatcatcgtggcgaaaaatagtagattgtaggattcctgtttggttcagttacatggctgaaaaacctggtgattggggatgccgctcctcttagagttattcaagactctgttaagttacttggggatggaaccattccatgcatcactcttatacttggaggcaacctcacac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="-" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="115852" stop="113879"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="115552" g_stop="115484" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="69" r_length="69" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="115483" i_stop="115390" i_length="94">
            <donor d_prob="0.969" d_score="1.00"/>
            <acceptor a_prob="0.679" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="115389" g_stop="115152" g_length="238"/>
          <reference_exon_boundary r_type="cDNA" r_start="70" r_stop="307" r_length="238" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="115151" i_stop="115005" i_length="147">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.887" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="115004" g_stop="114904" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="308" r_stop="408" r_length="101" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="114903" i_stop="114229" i_length="675">
            <donor d_prob="0.721" d_score="1.00"/>
            <acceptor a_prob="0.906" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="114228" g_stop="114179" g_length="50"/>
          <reference_exon_boundary r_type="cDNA" r_start="409" r_stop="458" r_length="50" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="-" ref_id="SGN-E237770" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>458</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E237770" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="115552" e_stop="115484"/>
          <exon e_start="115389" e_stop="115152"/>
          <exon e_start="115004" e_stop="114904"/>
          <exon e_start="114228" e_stop="114179"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAAGTCCATTTGGTGATCATAAAACTTGTGCTTCTGTTGGCCTTTCGTATGCATCTTTCTCAATGGCCGTAAGTTTTTCATTTAAAACATCAAATTCTCCCCCTGAAGTTTATGTTCATAAACTTCCAATGATCAACACAAAATTTTCGCGATTTTTTGTAGCTTGGAGGTTTCTACATTTGGACATTCACTTATCAGCTAATAAGAAATTCATCCTTGAAATTCAAATCACTAAAAACAGCAGAGGAAAACGAAGCGTTCAAGGGACCAAATGTGGACTCAGAGACAAATGAAAAGTCTTGCCTTCTCGACAACAATTCTCAAGATCAACTTCCTATTAGTACCACAAAAACAACTGAAAATCAAACAGTAGAAGTATCATCGTGGCGAAAAATAGTAGGTGTGGTACACACTTTCTTAGAAGAAATAACAGCACCTCCAACTCTTGGAGCTGTAAGTATTACTTATTTCTGATTTCACTTGTAGTTTTTCAATGGATGTAATTATAACTCCGATTTTTTCCCCCTGTTTTTGAATGATATTTCAGATTGTAGGATTCCTGTTTGGTTCAGTTACATGGCTGAAAAACCTGGTGATTGGGGATGCCGCTCCTCTTAGAGTTATTCAAGACTCTGTTAAGTTACTTGGGTATGTATTACTGGTTAAATACAATAGAGCCCCGTCAGTATGGGCTAGGTCTGGCTTAACCCGGGATTTCATAGAACTGAACTTAGGATTTTTAAAGTCCGTTTAACAAAAGAGCTTTTTAGCCCAGCCTGAATAAGTTTACTAGTTTGTGGGGCTTGAGAAATATTGATAGAGCCAACCTGTGAGCCAAAAATTTTTATTAAAAATATAATATAATATTAAAATTTAAAAATAAAGAGAGTCCAAACTCAAAACAATTAGATTAAAAAATCTATTTAGTTATTTATACTTTTACTTGAATAAAAGTTAATAAATATTAGAAAGATAATTTTATTCGTGAATTTGATCAACAAGTAGTAATATTAATAGCATATAATATTGTTTTGTCGATATTCATGATAATACATTTAGATAATAATTTATAATTTAATCTAATCATTATAAAAAATATATATATAATTTTTTAAAAAGTGGACTGGCCCTGTAGTCCACATACTTGTGGGGTTGATCCGATCGAGACGATCGTTTTTTGGCCCATACAAAAAAAAATGGGCTAGCTTGACTCGTAAAATATCAAAGTTTGTATGAATTAATGCGGATGGGGTGAGCTGGCTCATTTTGACAGCTCTAGGCGATGAACGAAAAGGTTTACATGTTTGTTTTCTTACCTATCAGGGATGGAACCATTCCATGCATCACTCTTATACTTGGAGGCAACCTCACAC</genome_strand>
        <mrna_strand>GGAAGTCCATTTGGTGATCATAAAACTTGTGCTTCTGTTGGCCTTTCGTATGCATCTTTCTCAATGGCC..............................................................................................CTTGGAGGTTTCTACATTTGGACATTCACTTATCAGCTAATAAGAAATTCATCCTTGAAATTCAAATCACTAAAAACAGCAGAGGAAAACGAAGCGTTCAAGGGACCAAATGTGGACTCAGAGACAAATGAAAAGTCTTGCCTTCTCGACAACAATTCTCAAGATCAACTTCCTATTAGTACCACAAAAACAACTGAAAATCAAACAGTAGAAGTATCATCGTGGCGAAAAATAGTAG...................................................................................................................................................ATTGTAGGATTCCTGTTTGGTTCAGTTACATGGCTGAAAAACCTGGTGATTGGGGATGCCGCTCCTCTTAGAGTTATTCAAGACTCTGTTAAGTTACTTGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATGGAACCATTCCATGCATCACTCTTATACTTGGAGGCAACCTCACAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E316836" ref_strand="+" ref_description="SGN-E316836 [cTOA-27-E17]">
      <seq>ccggttaatgttggattaacatttctatttggagggattcttggatggatagctatgaaaatattgaaaccaaagccacatcttgagggactcattattgctacatgctcatcaggaaacttgggaaatcttcttttgattgtcattcctgcaatttgcaaagaagatggaagtccatttggtgatcataaaacttgtgcttctgttggcctttcgtatgcatctttctcaatggcccttggaggtttctacatttggacattcacttatcagctaataagaaattcatccttgaaattcaaatcactaaaaacagcagaggaaaacgaagcgttcaagggaccaaatgtggactcagagacaaatgaaaagtcttgccttctcgacaacaattctcaagatcaacttcctattagtaccacaaaaacaactgaaaatcaaacagtagaagtatcatcgtggcgaaaaatagtaggtgtggtacacactttcttagaagaaataacagcacctccaactcttggagctattgtaggattcctgtttggttcagttacatggctgaaaaacctggtgattggggatgccgctcctcttagagttattncagactctgttaagttacttggggatggaccatttcatgcatcactcttatacttgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="-" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="116151" stop="113893"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="115851" g_stop="115737" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="115" r_length="115" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="115736" i_stop="115606" i_length="131">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.595" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="115605" g_stop="115484" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="116" r_stop="237" r_length="122" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="115483" i_stop="115390" i_length="94">
            <donor d_prob="0.969" d_score="1.00"/>
            <acceptor a_prob="0.679" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="115389" g_stop="115099" g_length="291"/>
          <reference_exon_boundary r_type="cDNA" r_start="238" r_stop="528" r_length="291" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="115098" i_stop="115005" i_length="94">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.887" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="115004" g_stop="114904" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="529" r_stop="629" r_length="101" r_score="0.980"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="114903" i_stop="114229" i_length="675">
            <donor d_prob="0.721" d_score="0.96"/>
            <acceptor a_prob="0.906" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="114228" g_stop="114193" g_length="36"/>
          <reference_exon_boundary r_type="cDNA" r_start="630" r_stop="664" r_length="35" r_score="0.944"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="-" ref_id="SGN-E316836" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>665</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E316836" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="115851" e_stop="115737"/>
          <exon e_start="115605" e_stop="115484"/>
          <exon e_start="115389" e_stop="115099"/>
          <exon e_start="115004" e_stop="114904"/>
          <exon e_start="114228" e_stop="114193"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCGGTTAATGTTGGATTAACATTTCTATTTGGAGGGATTCTTGGATGGATAGCTATGAAAATATTGAAACCAAAGCCACATCTTGAGGGACTCATTATTGCTACATGCTCATCAGGTAACAGTTGATGGGGGCGGAGCTAGAGTTTTTAGTTACATATTCACAAAAAAAAACACAATACTGGTTTAATACAGTTACTCAAAATTTTGGATCTGCCTCTGTTCTAAACATAATTTTTTGGCAAATAGGAAACTTGGGAAATCTTCTTTTGATTGTCATTCCTGCAATTTGCAAAGAAGATGGAAGTCCATTTGGTGATCATAAAACTTGTGCTTCTGTTGGCCTTTCGTATGCATCTTTCTCAATGGCCGTAAGTTTTTCATTTAAAACATCAAATTCTCCCCCTGAAGTTTATGTTCATAAACTTCCAATGATCAACACAAAATTTTCGCGATTTTTTGTAGCTTGGAGGTTTCTACATTTGGACATTCACTTATCAGCTAATAAGAAATTCATCCTTGAAATTCAAATCACTAAAAACAGCAGAGGAAAACGAAGCGTTCAAGGGACCAAATGTGGACTCAGAGACAAATGAAAAGTCTTGCCTTCTCGACAACAATTCTCAAGATCAACTTCCTATTAGTACCACAAAAACAACTGAAAATCAAACAGTAGAAGTATCATCGTGGCGAAAAATAGTAGGTGTGGTACACACTTTCTTAGAAGAAATAACAGCACCTCCAACTCTTGGAGCTGTAAGTATTACTTATTTCTGATTTCACTTGTAGTTTTTCAATGGATGTAATTATAACTCCGATTTTTTCCCCCTGTTTTTGAATGATATTTCAGATTGTAGGATTCCTGTTTGGTTCAGTTACATGGCTGAAAAACCTGGTGATTGGGGATGCCGCTCCTCTTAGAGTTATTCAAGACTCTGTTAAGTTACTTGGGTATGTATTACTGGTTAAATACAATAGAGCCCCGTCAGTATGGGCTAGGTCTGGCTTAACCCGGGATTTCATAGAACTGAACTTAGGATTTTTAAAGTCCGTTTAACAAAAGAGCTTTTTAGCCCAGCCTGAATAAGTTTACTAGTTTGTGGGGCTTGAGAAATATTGATAGAGCCAACCTGTGAGCCAAAAATTTTTATTAAAAATATAATATAATATTAAAATTTAAAAATAAAGAGAGTCCAAACTCAAAACAATTAGATTAAAAAATCTATTTAGTTATTTATACTTTTACTTGAATAAAAGTTAATAAATATTAGAAAGATAATTTTATTCGTGAATTTGATCAACAAGTAGTAATATTAATAGCATATAATATTGTTTTGTCGATATTCATGATAATACATTTAGATAATAATTTATAATTTAATCTAATCATTATAAAAAATATATATATAATTTTTTAAAAAGTGGACTGGCCCTGTAGTCCACATACTTGTGGGGTTGATCCGATCGAGACGATCGTTTTTTGGCCCATACAAAAAAAAATGGGCTAGCTTGACTCGTAAAATATCAAAGTTTGTATGAATTAATGCGGATGGGGTGAGCTGGCTCATTTTGACAGCTCTAGGCGATGAACGAAAAGGTTTACATGTTTGTTTTCTTACCTATCAGGGATGGAACCATTCCATGCATCACTCTTATACTTGG</genome_strand>
        <mrna_strand>CCGGTTAATGTTGGATTAACATTTCTATTTGGAGGGATTCTTGGATGGATAGCTATGAAAATATTGAAACCAAAGCCACATCTTGAGGGACTCATTATTGCTACATGCTCATCAG...................................................................................................................................GAAACTTGGGAAATCTTCTTTTGATTGTCATTCCTGCAATTTGCAAAGAAGATGGAAGTCCATTTGGTGATCATAAAACTTGTGCTTCTGTTGGCCTTTCGTATGCATCTTTCTCAATGGCC..............................................................................................CTTGGAGGTTTCTACATTTGGACATTCACTTATCAGCTAATAAGAAATTCATCCTTGAAATTCAAATCACTAAAAACAGCAGAGGAAAACGAAGCGTTCAAGGGACCAAATGTGGACTCAGAGACAAATGAAAAGTCTTGCCTTCTCGACAACAATTCTCAAGATCAACTTCCTATTAGTACCACAAAAACAACTGAAAATCAAACAGTAGAAGTATCATCGTGGCGAAAAATAGTAGGTGTGGTACACACTTTCTTAGAAGAAATAACAGCACCTCCAACTCTTGGAGCT..............................................................................................ATTGTAGGATTCCTGTTTGGTTCAGTTACATGGCTGAAAAACCTGGTGATTGGGGATGCCGCTCCTCTTAGAGTTATTNCAGACTCTGTTAAGTTACTTGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATGG-ACCATTTCATGCATCACTCTTATACTTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E555274" ref_strand="+" ref_description="SGN-E555274 [cTSC-6-P20]">
      <seq>catcaatgccaatattgcaagtgctaatagtaagtggtttaggagctgtaatggccactgattatcttaagctacttcctgctgatgcccgcaaataccttaacagaatagtttttgtgatatttacaccggctttgatgtttgcgagtttggcagagtctgtcacctttcaagatatcatcacatggtggtttatgccggttaatgttggattaacatttctatttggagggattcttggatggatagctatgaaaatattgaaaccaaagccacatcttgagggactcattattgctacatgctcatcaggaaacttgggaaatcttcttttgattgtcattcctgcaatttgcaaagaagatggaagtccatttggtgatcataaaacttgtgcttctgttggcctttcgtatgcatctttctcaatggcccttggaggtttctacatttggacattcacttatcagctaataagaaattcatccttgaaattcaaatcactaaaaacagcagaggaaaacgaagcgttcaagggaccaaatgtggactcagagacaaatgaaaagtcttgccttctcgacaacaattctcaagatcaacttcctattagtaccacaaaaacaactgaaaatcaaacagtagaagtatcatcgtggcgaaaaatagtaggtgtggtacacactttcttagaagaaataacagcacctccaactcttggagctattgtaggattcctgtttggttcagttacatggctgaaaaacctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="-" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="116509" stop="114660"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="116209" g_stop="116103" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="107" r_length="107" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="116102" i_stop="116019" i_length="84">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.902" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="116018" g_stop="115939" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="108" r_stop="187" r_length="80" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="115938" i_stop="115862" i_length="77">
            <donor d_prob="0.976" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="115861" g_stop="115737" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="188" r_stop="312" r_length="125" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="115736" i_stop="115606" i_length="131">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.595" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="115605" g_stop="115484" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="313" r_stop="434" r_length="122" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="115483" i_stop="115390" i_length="94">
            <donor d_prob="0.969" d_score="1.00"/>
            <acceptor a_prob="0.679" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="115389" g_stop="115099" g_length="291"/>
          <reference_exon_boundary r_type="cDNA" r_start="435" r_stop="725" r_length="291" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="115098" i_stop="115005" i_length="94">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.887" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="115004" g_stop="114960" g_length="45"/>
          <reference_exon_boundary r_type="cDNA" r_start="726" r_stop="770" r_length="45" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="-" ref_id="SGN-E555274" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>770</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E555274" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="116209" e_stop="116103"/>
          <exon e_start="116018" e_stop="115939"/>
          <exon e_start="115861" e_stop="115737"/>
          <exon e_start="115605" e_stop="115484"/>
          <exon e_start="115389" e_stop="115099"/>
          <exon e_start="115004" e_stop="114960"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATCAATGCCAATATTGCAAGTGCTAATAGTAAGTGGTTTAGGAGCTGTAATGGCCACTGATTATCTTAAGCTACTTCCTGCTGATGCCCGCAAATACCTTAACAGAGTAAGTTATCTTCCTAATTTTTAGCTATTTTTATTTTATTTATAGACTCGAGTTTAACTTTTATACATTCACGTATTTCTCCAGATAGTTTTTGTGATATTTACACCGGCTTTGATGTTTGCGAGTTTGGCAGAGTCTGTCACCTTTCAAGATATCATCACATGGTACATTTATCGCTCAATCAAACAGTATTACATAAATTGAAACGTAAACAAACAGTATTTGATTATTGTCTATACAGGTGGTTTATGCCGGTTAATGTTGGATTAACATTTCTATTTGGAGGGATTCTTGGATGGATAGCTATGAAAATATTGAAACCAAAGCCACATCTTGAGGGACTCATTATTGCTACATGCTCATCAGGTAACAGTTGATGGGGGCGGAGCTAGAGTTTTTAGTTACATATTCACAAAAAAAAACACAATACTGGTTTAATACAGTTACTCAAAATTTTGGATCTGCCTCTGTTCTAAACATAATTTTTTGGCAAATAGGAAACTTGGGAAATCTTCTTTTGATTGTCATTCCTGCAATTTGCAAAGAAGATGGAAGTCCATTTGGTGATCATAAAACTTGTGCTTCTGTTGGCCTTTCGTATGCATCTTTCTCAATGGCCGTAAGTTTTTCATTTAAAACATCAAATTCTCCCCCTGAAGTTTATGTTCATAAACTTCCAATGATCAACACAAAATTTTCGCGATTTTTTGTAGCTTGGAGGTTTCTACATTTGGACATTCACTTATCAGCTAATAAGAAATTCATCCTTGAAATTCAAATCACTAAAAACAGCAGAGGAAAACGAAGCGTTCAAGGGACCAAATGTGGACTCAGAGACAAATGAAAAGTCTTGCCTTCTCGACAACAATTCTCAAGATCAACTTCCTATTAGTACCACAAAAACAACTGAAAATCAAACAGTAGAAGTATCATCGTGGCGAAAAATAGTAGGTGTGGTACACACTTTCTTAGAAGAAATAACAGCACCTCCAACTCTTGGAGCTGTAAGTATTACTTATTTCTGATTTCACTTGTAGTTTTTCAATGGATGTAATTATAACTCCGATTTTTTCCCCCTGTTTTTGAATGATATTTCAGATTGTAGGATTCCTGTTTGGTTCAGTTACATGGCTGAAAAACCTG</genome_strand>
        <mrna_strand>CATCAATGCCAATATTGCAAGTGCTAATAGTAAGTGGTTTAGGAGCTGTAATGGCCACTGATTATCTTAAGCTACTTCCTGCTGATGCCCGCAAATACCTTAACAGA....................................................................................ATAGTTTTTGTGATATTTACACCGGCTTTGATGTTTGCGAGTTTGGCAGAGTCTGTCACCTTTCAAGATATCATCACATG.............................................................................GTGGTTTATGCCGGTTAATGTTGGATTAACATTTCTATTTGGAGGGATTCTTGGATGGATAGCTATGAAAATATTGAAACCAAAGCCACATCTTGAGGGACTCATTATTGCTACATGCTCATCAG...................................................................................................................................GAAACTTGGGAAATCTTCTTTTGATTGTCATTCCTGCAATTTGCAAAGAAGATGGAAGTCCATTTGGTGATCATAAAACTTGTGCTTCTGTTGGCCTTTCGTATGCATCTTTCTCAATGGCC..............................................................................................CTTGGAGGTTTCTACATTTGGACATTCACTTATCAGCTAATAAGAAATTCATCCTTGAAATTCAAATCACTAAAAACAGCAGAGGAAAACGAAGCGTTCAAGGGACCAAATGTGGACTCAGAGACAAATGAAAAGTCTTGCCTTCTCGACAACAATTCTCAAGATCAACTTCCTATTAGTACCACAAAAACAACTGAAAATCAAACAGTAGAAGTATCATCGTGGCGAAAAATAGTAGGTGTGGTACACACTTTCTTAGAAGAAATAACAGCACCTCCAACTCTTGGAGCT..............................................................................................ATTGTAGGATTCCTGTTTGGTTCAGTTACATGGCTGAAAAACCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E552455" ref_strand="+" ref_description="SGN-E552455 [cTSB-3-P21]">
      <seq>catcaatgccaatattgcaagtgctaatagtaagtggtttaggagctgtaatggccactgattatcttaagctacttcctgctgatgcccgcaaataccttaacagaatagtttttgtgatatttacaccggctttgatgtttgcgagtttggcagagtctgtcacctttcaagatatcatcacatggtggtttatgccggttaatgttggattaacatttctatttggagggattcttggatggatagctatgaaaatattgaaaccaaagccacatcttgagggactcattattgctacatgctcatcaggaaacttgggaaatcttcttttgattgtcattcctgcaatttgcaaagaagatggaagtccatttggtgatcataaaacttgtgcttctgttggcctttcgtatgcatctttctcaatggcccttggaggtttctacatttggacattcacttatcagctaataagaaattcatccttgaaattcaaatcactaaaaacagcagaggaaaacgaagcgttcaagggaccaaatgtggactcagagacaaatgaaaagtcttgccttctcgacaacaattctcaagatcaacttcctattagtaccacaaaaacaactgaaaatcaaacagtagaagtatcatcgtggcgaaaaataatagggtgtgggtacacactttcttagaagaaataacagcacctccaactcttgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="-" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="116509" stop="114803"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="116209" g_stop="116103" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="107" r_length="107" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="116102" i_stop="116019" i_length="84">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.902" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="116018" g_stop="115939" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="108" r_stop="187" r_length="80" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="115938" i_stop="115862" i_length="77">
            <donor d_prob="0.976" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="115861" g_stop="115737" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="188" r_stop="312" r_length="125" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="115736" i_stop="115606" i_length="131">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.595" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="115605" g_stop="115484" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="313" r_stop="434" r_length="122" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="115483" i_stop="115390" i_length="94">
            <donor d_prob="0.969" d_score="1.00"/>
            <acceptor a_prob="0.679" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="115389" g_stop="115103" g_length="287"/>
          <reference_exon_boundary r_type="cDNA" r_start="435" r_stop="723" r_length="289" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="-" ref_id="SGN-E552455" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>721</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E552455" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="116209" e_stop="116103"/>
          <exon e_start="116018" e_stop="115939"/>
          <exon e_start="115861" e_stop="115737"/>
          <exon e_start="115605" e_stop="115484"/>
          <exon e_start="115389" e_stop="115103"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATCAATGCCAATATTGCAAGTGCTAATAGTAAGTGGTTTAGGAGCTGTAATGGCCACTGATTATCTTAAGCTACTTCCTGCTGATGCCCGCAAATACCTTAACAGAGTAAGTTATCTTCCTAATTTTTAGCTATTTTTATTTTATTTATAGACTCGAGTTTAACTTTTATACATTCACGTATTTCTCCAGATAGTTTTTGTGATATTTACACCGGCTTTGATGTTTGCGAGTTTGGCAGAGTCTGTCACCTTTCAAGATATCATCACATGGTACATTTATCGCTCAATCAAACAGTATTACATAAATTGAAACGTAAACAAACAGTATTTGATTATTGTCTATACAGGTGGTTTATGCCGGTTAATGTTGGATTAACATTTCTATTTGGAGGGATTCTTGGATGGATAGCTATGAAAATATTGAAACCAAAGCCACATCTTGAGGGACTCATTATTGCTACATGCTCATCAGGTAACAGTTGATGGGGGCGGAGCTAGAGTTTTTAGTTACATATTCACAAAAAAAAACACAATACTGGTTTAATACAGTTACTCAAAATTTTGGATCTGCCTCTGTTCTAAACATAATTTTTTGGCAAATAGGAAACTTGGGAAATCTTCTTTTGATTGTCATTCCTGCAATTTGCAAAGAAGATGGAAGTCCATTTGGTGATCATAAAACTTGTGCTTCTGTTGGCCTTTCGTATGCATCTTTCTCAATGGCCGTAAGTTTTTCATTTAAAACATCAAATTCTCCCCCTGAAGTTTATGTTCATAAACTTCCAATGATCAACACAAAATTTTCGCGATTTTTTGTAGCTTGGAGGTTTCTACATTTGGACATTCACTTATCAGCTAATAAGAAATTCATCCTTGAAATTCAAATCACTAAAAACAGCAGAGGAAAACGAAGCGTTCAAGGGACCAAATGTGGACTCAGAGACAAATGAAAAGTCTTGCCTTCTCGACAACAATTCTCAAGATCAACTTCCTATTAGTACCACAAAAACAACTGAAAATCAAACAGTAGAAGTATCATCGTGGCGAAAAATAGTA-GGTGT-GGTACACACTTTCTTAGAAGAAATAACAGCACCTCCAACTCTTGG</genome_strand>
        <mrna_strand>CATCAATGCCAATATTGCAAGTGCTAATAGTAAGTGGTTTAGGAGCTGTAATGGCCACTGATTATCTTAAGCTACTTCCTGCTGATGCCCGCAAATACCTTAACAGA....................................................................................ATAGTTTTTGTGATATTTACACCGGCTTTGATGTTTGCGAGTTTGGCAGAGTCTGTCACCTTTCAAGATATCATCACATG.............................................................................GTGGTTTATGCCGGTTAATGTTGGATTAACATTTCTATTTGGAGGGATTCTTGGATGGATAGCTATGAAAATATTGAAACCAAAGCCACATCTTGAGGGACTCATTATTGCTACATGCTCATCAG...................................................................................................................................GAAACTTGGGAAATCTTCTTTTGATTGTCATTCCTGCAATTTGCAAAGAAGATGGAAGTCCATTTGGTGATCATAAAACTTGTGCTTCTGTTGGCCTTTCGTATGCATCTTTCTCAATGGCC..............................................................................................CTTGGAGGTTTCTACATTTGGACATTCACTTATCAGCTAATAAGAAATTCATCCTTGAAATTCAAATCACTAAAAACAGCAGAGGAAAACGAAGCGTTCAAGGGACCAAATGTGGACTCAGAGACAAATGAAAAGTCTTGCCTTCTCGACAACAATTCTCAAGATCAACTTCCTATTAGTACCACAAAAACAACTGAAAATCAAACAGTAGAAGTATCATCGTGGCGAAAAATAATAGGGTGTGGGTACACACTTTCTTAGAAGAAATAACAGCACCTCCAACTCTTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E332223" ref_strand="+" ref_description="SGN-E332223 [cTOD-17-I15]">
      <seq>tttttgaacttcatttttttttctttatcgtcgtatttatcgatttatgttagaagaaaaaactcggattgaaaaaataattccaggatatagatagagacagtttattaaaaaaaaaaaagaagaagacatttttgaaactccctattttagacgttacaactagcaaataacatacattttttatcaacaaaattttgcaaaaagaaaaaagaaaaaaatggggtttatgacattattagaagtggcatcaatgccaatattgcaagtgctaatagtaagtggtttaggagctgtaatggccactgattatcttaagctacttcctgctgatgcccgcaaataccttaacagaatagtttttgtgatatttacaccggctttgatgtttgcgagtttggcagagtctgtcacctttcaagatatcatcacatggtggtttatgccggttaatgttggattaacatttctatttggagggattcttggatggatagctatgaaaatattgaaaccaaagccacatcttgagggactcattattgctacatgctcatcaggaaacttgggaaatcttcttttgattgtcattcctgcaatttgcaaagaagatggaagtccatttggtgatcataaaacttgtgcttctgttggcctttcgtatgcatctttctcaatggcccttggagggttctacatttggacattcacttatcagct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="-" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="118129" stop="115052"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="117829" g_stop="117743" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="86" r_length="86" r_score="0.989"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="117742" i_stop="116372" i_length="1371">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="116371" g_stop="116103" g_length="269"/>
          <reference_exon_boundary r_type="cDNA" r_start="87" r_stop="355" r_length="269" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="116102" i_stop="116019" i_length="84">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.902" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="116018" g_stop="115939" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="356" r_stop="435" r_length="80" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="115938" i_stop="115862" i_length="77">
            <donor d_prob="0.976" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="115861" g_stop="115737" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="436" r_stop="560" r_length="125" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="115736" i_stop="115606" i_length="131">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.595" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="115605" g_stop="115484" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="561" r_stop="682" r_length="122" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="115483" i_stop="115390" i_length="94">
            <donor d_prob="0.969" d_score="1.00"/>
            <acceptor a_prob="0.679" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="115389" g_stop="115352" g_length="38"/>
          <reference_exon_boundary r_type="cDNA" r_start="683" r_stop="720" r_length="38" r_score="0.974"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="-" ref_id="SGN-E332223" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>721</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E332223" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="117829" e_stop="117743"/>
          <exon e_start="116371" e_stop="116103"/>
          <exon e_start="116018" e_stop="115939"/>
          <exon e_start="115861" e_stop="115737"/>
          <exon e_start="115605" e_stop="115484"/>
          <exon e_start="115389" e_stop="115352"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTTGAACTTCATTTTTTTTTCTTTATCGTCGTATTTATCGATTTATGTTAGAAGAAAAAACTCGGATTGAAAAAAATAATTCCAGGTTCGTTTTCTTATCTCTCTTGATGATTTTATTTTTCTTTTTAGTCTGAGGTGATTTGGAATTTATATAAGATGCATGAATTAATCTTATTCTTGTTTGCGTTCATTAGAACTCTTTGTTTTTCATTTCTTATTATGAAAAATGAAGATGGCTAGAATATTAAAAAAAATATATATATATAAGAACGAGAGCAGATTTTTTAAAGTTGTAAAAAAGTTTATTTTTTTATTTGTGTAAAAATGGGAATGTGTTGGTGTTTCTAAAGGTAATTTATTGTATTTACTAATATTTTATTTTGTAGGTTTGATATGAACAATGAAGATTTTTTGTAAGCTTAAACGTTACGTTTTCCTGACATTTAGGTTAACACAAATAATACTGTTTAGATAAGTTTAATCTTTTTGGAAATAGGTGTTTGGCTAAGCTAAACTTTTGAGAATTCACAAAAGCTAAAAAAAAAAAATGAATGATGATAAAAAATTGTTAAATATCTCATTTTCTTTTTAAAAGTCTGTTTAGAAAAGAAAAATGATAATATTTTTAACTTTAATTTTTCATGTGACATGTTTAAGGTCATAAGATATATTTTAACATAACTTTAATTTAGAATCACAAGCTTTCTTTTCTTAAACTCTCTTTTAAGTCAAATTAGATCATTTTTTAAAAAACGAAGAAAGTACCCCTGTTCTTTGGCTGTTTGGCTTTACGATAAATATTTATCCCAAAAACTCACAGTATTATTTTTTTTATGTACGTAATATAATTTTATAAAACTTAATTTTCTCATGATTGGATAGGCTTAAAGTATCTTGAGCAACGCCATTGCTGAGGTAAAGAACAGAATTGCTATTAATAGAAATGTATCACATGCACCTTTAGTCGTTTTCTCTCTCTATATATTTTACATACATGTTTCTATTGCTGATACATTTGAACTTATTGACTTAGACTAAGATAACGGCAGAAAAATGCAAACTTAGAAGTGTTCGAATTTAATTTTTCATCGAATCGATTTTGATTTGAAACGAAATTTAAATAGTAATTATGTGAAAACACGAGTCCATGTCATGTCAAAGGAAATGTTGTTTCCTATGCTTACCTAAGCAAATGTCATGCTCATAGGCCCATGCAATAATAACAACCAAAATGTACACACGCATTATTCTTAGCTCGAGAAGGTAGAAGTCGTTTCAAAACAAACAATGAAAAGGAGAAGATATCATAAACAACGTACACATTAAATTTTTTGCATATTATGTAAACATTAAATTTTTGCTTATTTATTTATTCGTTGTTTGTTTGTTTATTGAGGTCTAAGTACATTTACAGTACGAATTAATTTTTTATTTTTTTTTGGTTTGGTGCTTGCAGGATATAGATAGAGACAGTTTATTAAAAAAAAAAAAGAAGAAGACATTTTTGAAACTCCCTATTTTAGACGTTACAACTAGCAAATAACATACATTTTTTATCAACAAAATTTTGCAAAAAGAAAAAAGAAAAAAATGGGGTTTATGACATTATTAGAAGTGGCATCAATGCCAATATTGCAAGTGCTAATAGTAAGTGGTTTAGGAGCTGTAATGGCCACTGATTATCTTAAGCTACTTCCTGCTGATGCCCGCAAATACCTTAACAGAGTAAGTTATCTTCCTAATTTTTAGCTATTTTTATTTTATTTATAGACTCGAGTTTAACTTTTATACATTCACGTATTTCTCCAGATAGTTTTTGTGATATTTACACCGGCTTTGATGTTTGCGAGTTTGGCAGAGTCTGTCACCTTTCAAGATATCATCACATGGTACATTTATCGCTCAATCAAACAGTATTACATAAATTGAAACGTAAACAAACAGTATTTGATTATTGTCTATACAGGTGGTTTATGCCGGTTAATGTTGGATTAACATTTCTATTTGGAGGGATTCTTGGATGGATAGCTATGAAAATATTGAAACCAAAGCCACATCTTGAGGGACTCATTATTGCTACATGCTCATCAGGTAACAGTTGATGGGGGCGGAGCTAGAGTTTTTAGTTACATATTCACAAAAAAAAACACAATACTGGTTTAATACAGTTACTCAAAATTTTGGATCTGCCTCTGTTCTAAACATAATTTTTTGGCAAATAGGAAACTTGGGAAATCTTCTTTTGATTGTCATTCCTGCAATTTGCAAAGAAGATGGAAGTCCATTTGGTGATCATAAAACTTGTGCTTCTGTTGGCCTTTCGTATGCATCTTTCTCAATGGCCGTAAGTTTTTCATTTAAAACATCAAATTCTCCCCCTGAAGTTTATGTTCATAAACTTCCAATGATCAACACAAAATTTTCGCGATTTTTTGTAGCTTGGAGGTTTCTACATTTGGACATTCACTTATCAGCT</genome_strand>
        <mrna_strand>TTTTTGAACTTCATTTTTTTTTCTTTATCGTCGTATTTATCGATTTATGTTAGAAGAAAAAACTCGGATTG-AAAAAATAATTCCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATATAGATAGAGACAGTTTATTAAAAAAAAAAAAGAAGAAGACATTTTTGAAACTCCCTATTTTAGACGTTACAACTAGCAAATAACATACATTTTTTATCAACAAAATTTTGCAAAAAGAAAAAAGAAAAAAATGGGGTTTATGACATTATTAGAAGTGGCATCAATGCCAATATTGCAAGTGCTAATAGTAAGTGGTTTAGGAGCTGTAATGGCCACTGATTATCTTAAGCTACTTCCTGCTGATGCCCGCAAATACCTTAACAGA....................................................................................ATAGTTTTTGTGATATTTACACCGGCTTTGATGTTTGCGAGTTTGGCAGAGTCTGTCACCTTTCAAGATATCATCACATG.............................................................................GTGGTTTATGCCGGTTAATGTTGGATTAACATTTCTATTTGGAGGGATTCTTGGATGGATAGCTATGAAAATATTGAAACCAAAGCCACATCTTGAGGGACTCATTATTGCTACATGCTCATCAG...................................................................................................................................GAAACTTGGGAAATCTTCTTTTGATTGTCATTCCTGCAATTTGCAAAGAAGATGGAAGTCCATTTGGTGATCATAAAACTTGTGCTTCTGTTGGCCTTTCGTATGCATCTTTCTCAATGGCC..............................................................................................CTTGGAGGGTTCTACATTTGGACATTCACTTATCAGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E368189" ref_strand="+" ref_description="SGN-E368189 [TUS-22-O20]">
      <seq>ttcttcctataatatttttgaacttcattttttttctttatcgtcgtatttatcgatttatgttagaagaaaaaactcggattgaaaaaaataattccaggttcgttttcttatctctcttgatgattttatttttctttttagtctgaggtgatttggaatttatataagatgcatgaattaatcttattcttgtttgcgttcattagaactctttgtttttcatttcttattatgaaaaatgaagatggctagaatattaaaaaaaatatatatatataagaacgagagcagattttttaaagttgtaaaaaagtttatttttttatttgtgtaaaaatgggaatgtgttggtgtttctaaaggtaatttattgtatttactaatattttattttgtaggtttgatatgaacaatgaagattttttgtaagcttaaacgttacgttttcctgacatttaggttaacacaaataatactgtttagataagtttaatctttttggaaataggtgtttggcttagctaaaccttttgagaattcacaaaagcttaaaaaaaaaaatgaatgatgattaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="-" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="118143" stop="116963"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="117843" g_stop="117264" g_length="580"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="580" r_length="580" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="-" ref_id="SGN-E368189" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>580</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E368189" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="117843" e_stop="117264"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCTTCCTATAATATTTTTGAACTTCATTTTTTTTTCTTTATCGTCGTATTTATCGATTTATGTTAGAAGAAAAAACTCGGATTGAAAAAAATAATTCCAGGTTCGTTTTCTTATCTCTCTTGATGATTTTATTTTTCTTTTTAGTCTGAGGTGATTTGGAATTTATATAAGATGCATGAATTAATCTTATTCTTGTTTGCGTTCATTAGAACTCTTTGTTTTTCATTTCTTATTATGAAAAATGAAGATGGCTAGAATATTAAAAAAAATATATATATATAAGAACGAGAGCAGATTTTTTAAAGTTGTAAAAAAGTTTATTTTTTTATTTGTGTAAAAATGGGAATGTGTTGGTGTTTCTAAAGGTAATTTATTGTATTTACTAATATTTTATTTTGTAGGTTTGATATGAACAATGAAGATTTTTTGTAAGCTTAAACGTTACGTTTTCCTGACATTTAGGTTAACACAAATAATACTGTTTAGATAAGTTTAATCTTTTTGGAAATAGGTGTTTGGCTAAGCTAAA-CTTTTGAGAATTCACAAAAGCTAAAAAAAAAAAATGAATGATGATAAAAA</genome_strand>
        <mrna_strand>TTCTTCCTATAATATTTTTGAACTTCATTTTTTT-TCTTTATCGTCGTATTTATCGATTTATGTTAGAAGAAAAAACTCGGATTGAAAAAAATAATTCCAGGTTCGTTTTCTTATCTCTCTTGATGATTTTATTTTTCTTTTTAGTCTGAGGTGATTTGGAATTTATATAAGATGCATGAATTAATCTTATTCTTGTTTGCGTTCATTAGAACTCTTTGTTTTTCATTTCTTATTATGAAAAATGAAGATGGCTAGAATATTAAAAAAAATATATATATATAAGAACGAGAGCAGATTTTTTAAAGTTGTAAAAAAGTTTATTTTTTTATTTGTGTAAAAATGGGAATGTGTTGGTGTTTCTAAAGGTAATTTATTGTATTTACTAATATTTTATTTTGTAGGTTTGATATGAACAATGAAGATTTTTTGTAAGCTTAAACGTTACGTTTTCCTGACATTTAGGTTAACACAAATAATACTGTTTAGATAAGTTTAATCTTTTTGGAAATAGGTGTTTGGCTTAGCTAAACCTTTTGAGAATTCACAAAAGCTTAAAAAAAAAAATGAATGATGATTAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E233550" ref_strand="+" ref_description="SGN-E233550 [cLED-9-O2]">
      <seq>ttcttcctataatatttttgaacttcattttttttctttatcgtcgtatttatcgatttatgttagaagaaaaaactcggattgaaaaaaataattccaggttcgttttcttatctctcttgatgattttatttttctttttagtctgaggtgatttggaatttatataagatgcatgaattaatcttattcttgtttgcgttcattagaactctttgtttttcatttcttattatgaaaaatgaagatggctagaatattaaaaaaaatatatatatataagaacgagagcagattttttaaagttgtaaaaaagtttatttttttatttgtgtaaaaatgggaatgtgttggtgtttctaaaggtaatttattgtatttactaatattttatttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="-" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="118143" stop="117146"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="117843" g_stop="117446" g_length="398"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="397" r_length="397" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="-" ref_id="SGN-E233550" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>398</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E233550" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="117843" e_stop="117446"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCTTCCTATAATATTTTTGAACTTCATTTTTTTTTCTTTATCGTCGTATTTATCGATTTATGTTAGAAGAAAAAACTCGGATTGAAAAAAATAATTCCAGGTTCGTTTTCTTATCTCTCTTGATGATTTTATTTTTCTTTTTAGTCTGAGGTGATTTGGAATTTATATAAGATGCATGAATTAATCTTATTCTTGTTTGCGTTCATTAGAACTCTTTGTTTTTCATTTCTTATTATGAAAAATGAAGATGGCTAGAATATTAAAAAAAATATATATATATAAGAACGAGAGCAGATTTTTTAAAGTTGTAAAAAAGTTTATTTTTTTATTTGTGTAAAAATGGGAATGTGTTGGTGTTTCTAAAGGTAATTTATTGTATTTACTAATATTTTATTTT</genome_strand>
        <mrna_strand>TTCTTCCTATAATATTTTTGAACTTCATTTTTTT-TCTTTATCGTCGTATTTATCGATTTATGTTAGAAGAAAAAACTCGGATTGAAAAAAATAATTCCAGGTTCGTTTTCTTATCTCTCTTGATGATTTTATTTTTCTTTTTAGTCTGAGGTGATTTGGAATTTATATAAGATGCATGAATTAATCTTATTCTTGTTTGCGTTCATTAGAACTCTTTGTTTTTCATTTCTTATTATGAAAAATGAAGATGGCTAGAATATTAAAAAAAATATATATATATAAGAACGAGAGCAGATTTTTTAAAGTTGTAAAAAAGTTTATTTTTTTATTTGTGTAAAAATGGGAATGTGTTGGTGTTTCTAAAGGTAATTTATTGTATTTACTAATATTTTATTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E240904" ref_strand="+" ref_description="SGN-E240904 [cLED-24-I9]">
      <seq>ttcttcctataatatttttgaacttcattttttttctttatcgtcgtatttatcgatttatgttagaagaaaaaactcggattgaaaaaaataattccaggttcgttttcttatctctcttgatgattttatttttctttttagtctgaggtgatttggaatttatataagatgcatgaattaatcttattcttgtttgcgttcattagaactctttgtttttcatttcttattatgaaaaatgaagatggctagaatattaaaaaaaatatatatatataagaacgagagcagattttttaaagttgtaaaaaagtttatttttttatttgtgtaaaaatgggaatgtgttggtgtttctaaaggtaatttattgtatttactaatattttatttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="-" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="118143" stop="117146"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="117843" g_stop="117446" g_length="398"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="397" r_length="397" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="-" ref_id="SGN-E240904" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>398</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E240904" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="117843" e_stop="117446"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCTTCCTATAATATTTTTGAACTTCATTTTTTTTTCTTTATCGTCGTATTTATCGATTTATGTTAGAAGAAAAAACTCGGATTGAAAAAAATAATTCCAGGTTCGTTTTCTTATCTCTCTTGATGATTTTATTTTTCTTTTTAGTCTGAGGTGATTTGGAATTTATATAAGATGCATGAATTAATCTTATTCTTGTTTGCGTTCATTAGAACTCTTTGTTTTTCATTTCTTATTATGAAAAATGAAGATGGCTAGAATATTAAAAAAAATATATATATATAAGAACGAGAGCAGATTTTTTAAAGTTGTAAAAAAGTTTATTTTTTTATTTGTGTAAAAATGGGAATGTGTTGGTGTTTCTAAAGGTAATTTATTGTATTTACTAATATTTTATTTT</genome_strand>
        <mrna_strand>TTCTTCCTATAATATTTTTGAACTTCATTTTTTT-TCTTTATCGTCGTATTTATCGATTTATGTTAGAAGAAAAAACTCGGATTGAAAAAAATAATTCCAGGTTCGTTTTCTTATCTCTCTTGATGATTTTATTTTTCTTTTTAGTCTGAGGTGATTTGGAATTTATATAAGATGCATGAATTAATCTTATTCTTGTTTGCGTTCATTAGAACTCTTTGTTTTTCATTTCTTATTATGAAAAATGAAGATGGCTAGAATATTAAAAAAAATATATATATATAAGAACGAGAGCAGATTTTTTAAAGTTGTAAAAAAGTTTATTTTTTTATTTGTGTAAAAATGGGAATGTGTTGGTGTTTCTAAAGGTAATTTATTGTATTTACTAATATTTTATTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E228025" ref_strand="+" ref_description="SGN-E228025 [cLED-2-I11]">
      <seq>ttcttcctataatatttttgaacttcattccttttctttatcgtcgtatttatcgattgatgttagaagaaaaaactcggattgaaaaaaataattccaggttcgttttcttatctctcttgatgatgttatttttctttttagtctgacgtgatttggaatttatataagatgcatgaattaatcttattcttgtttgcgttcattacaactctttgtttttcattgcttattatgaaaaatgaagatggctagaatattaaaaaaaatctatatttctacgatcgagagcagattttttaacgttgtaaaaacgtttatttttttatgtgtgtcaaaatgggaatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="-" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="118143" stop="117195"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="117843" g_stop="117495" g_length="349"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="348" r_length="348" r_score="0.951"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="-" ref_id="SGN-E228025" ref_strand="+">
        <total_alignment_score>0.951</total_alignment_score>
        <cumulative_length_of_scored_exons>349</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E228025" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="117843" e_stop="117495"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCTTCCTATAATATTTTTGAACTTCATTTTTTTTTCTTTATCGTCGTATTTATCGATTTATGTTAGAAGAAAAAACTCGGATTGAAAAAAATAATTCCAGGTTCGTTTTCTTATCTCTCTTGATGATTTTATTTTTCTTTTTAGTCTGAGGTGATTTGGAATTTATATAAGATGCATGAATTAATCTTATTCTTGTTTGCGTTCATTAGAACTCTTTGTTTTTCATTTCTTATTATGAAAAATGAAGATGGCTAGAATATTAAAAAAAATATATATATATAAGAACGAGAGCAGATTTTTTAAAGTTGTAAAAAAGTTTATTTTTTTATTTGTGTAAAAATGGGAATG</genome_strand>
        <mrna_strand>TTCTTCCTATAATATTTTTGAACTTCA-TTCCTTTTCTTTATCGTCGTATTTATCGATTGATGTTAGAAGAAAAAACTCGGATTGAAAAAAATAATTCCAGGTTCGTTTTCTTATCTCTCTTGATGATGTTATTTTTCTTTTTAGTCTGACGTGATTTGGAATTTATATAAGATGCATGAATTAATCTTATTCTTGTTTGCGTTCATTACAACTCTTTGTTTTTCATTGCTTATTATGAAAAATGAAGATGGCTAGAATATTAAAAAAAATCTATATTTCTACGATCGAGAGCAGATTTTTTAACGTTGTAAAAACGTTTATTTTTTTATGTGTGTCAAAATGGGAATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E366884" ref_strand="+" ref_description="SGN-E366884 [cLPT-6-F4]">
      <seq>ggaattcggcacgaggaggattggtgctccattcttctctttgttgaggatagtctcacgaatctttggactgagagagattcgatcttcacaggagttggaaagttcttctgagaagcacgataccgtgtccagattcctctttcagacagaattttgaagttggtcaattcattgatctcttgctcattgcacagttcgtataaactggaaatcctgaaactcagagcaactcctttcatccaatgcagaaactagagctttaagggaactgtagcattctgcaaaagctatcttctcagagcttccacagcagtcataccatcagtgcgatcaatctaccgcccaaagttgtggtgacagtgtattctgatgaaagtgaagatgacctgctatgcacacgtgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="+" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="126688" stop="129723"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="127002" g_stop="127055" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="19" r_stop="72" r_length="54" r_score="0.944"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="127056" i_stop="127174" i_length="119">
            <donor d_prob="0.889" d_score="0.94"/>
            <acceptor a_prob="0.000" a_score="0.82"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="127175" g_stop="127360" g_length="186"/>
          <reference_exon_boundary r_type="cDNA" r_start="73" r_stop="251" r_length="179" r_score="0.909"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="127361" i_stop="127449" i_length="89">
            <donor d_prob="0.993" d_score="0.96"/>
            <acceptor a_prob="0.894" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="127450" g_stop="127577" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="252" r_stop="379" r_length="128" r_score="0.992"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="127578" i_stop="129395" i_length="1818">
            <donor d_prob="0.983" d_score="0.98"/>
            <acceptor a_prob="0.998" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="129396" g_stop="129423" g_length="28"/>
          <reference_exon_boundary r_type="cDNA" r_start="380" r_stop="407" r_length="28" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="+" ref_id="SGN-E366884" ref_strand="+">
        <total_alignment_score>0.943</total_alignment_score>
        <cumulative_length_of_scored_exons>396</cumulative_length_of_scored_exons>
        <coverage percentage="0.973" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E366884" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="127002" e_stop="127055"/>
          <exon e_start="127175" e_stop="127360"/>
          <exon e_start="127450" e_stop="127577"/>
          <exon e_start="129396" e_stop="129423"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATTGGCGCTCCATTCTTCTCTTTGTTGAGGATACTGTCACGAATCTTTGGACTGTAAGTAACTCTGTCTGTGAGAGCAACTCCACATTCCCTTTCCTGTAGGCTGCAGCCCCAGTTCAGTTACTATCTCTTAAGCTACTTTTGGAAAACCTGACCGGAGAGTGTACTGTCAGGAGAGAGATTCGATCTTCAACAGAATATTCTGTTGGAAAGTTCTTCTGAAAAGCACGACACCGTGTCCAGATTCATCTCTCAGACAGAATTTCGAAGTTGGTCAATTCATTGATCTCTTGATCATTGCACAGTTTGTGTAAACTGGAAATCCAGAAACTCAGAGCAACTCCTTTCATCCAATGCAGGTAATTTGCTCTTGAGTGCTCGTATGTGTTAATAATCAATGATGTCAGGAAGTGTGTGCGACTAATTAATGTTCTTTTCCACTCTGCAGAAACTAGAGCTTTAAGGGAACTGTAGCATTCTGCAAAAGCTATCTTCTCAGAGCTTCCACAGCAGTCATACCATCAGTGCGATCAATCTACCGCCCAAAGTTGTGGTGACAATGTATTCTGATGAAAGGTAATATTATCAAATTTGTACGGAGGGTAGGTCTCTTTCTGATATTATCTCCAATATGTTAGTAACTACCATAACCTGATGTTTCTCTTTTCAGTTCAAGTGTGAAAATTAAACTTGTTAACATGTGGAAAAGCTAATAAAAAACTCAACGGGGTACTCAAGTACCTGCTATGGGGAGTCAAAAGAAGGTTATTAATCCTGCCATATGTTCCTGACCTGAATTTTTCTATTGCTTGTTTCAGTTAATTAGCTTAATTTCTTTCACCCACTTTTCACGATTTTCTTAGACTGCATTCTTAATGACCACGAAAGCATTAGAGCCACAGTCTTTTTCTAATTCCGTCTTGCTATTGTTCTAATCCTATATTAATTTTGAAGTTAACCTCAAGTATTAAATTTAATGGATAATATTTCATTCTTTTAACAGTTACATGTAATCACAGTGGGAGGAAAAACCACCTTTCAAATAGTGTGTGATTATGTGCTGAGTCATGCATGCTGGCATATAATCCAAAAACACTAAAGTTGCTTCGGTCACTATATATCACTCACTTCATCACTCCATTAAAGCACAAAATAATCTTCTCTTTTTCTTCCTTTACTTTGCTTTCTCCATTTTTTTCTTCTTCTCTTCTCTCTATTGTTATTGGGTCTCTTCGTAACAAGGGCGGTGCTAAGGAGGTGCAAGTAGAAATTATAAATGTTGAGGAGGAAATGAAGAAAAAAATAGAAAAAAGTTCAGGTGAAATCCCTCCATTAGATGTGAAAGACTATGAAGATCTAGGGTTGATTTGGAGAAATTAGGTGAAATTAGTTATGAAAATGTTGGCATAGATTTTCATGCCATGTTTTCTGATTTTTTTCCTAAAGATGAAGAGAAGGCTTAAAGGAGATGCTCTGAACTCTTTCCTGTCATTTTTTTTTTTTTTGAGGATTCTCTTTTCTGTCATTTCTTTGTTGGAAATTGTTACTAAAATTCATGGGAGGCTAAATGTTTCATAAAAGCTTAATTAACGTTAGTGCATCAGCAATGTCAAAAATTATGTAGTTATTCAAAAGCGATGCTTAATTAATTCGTATGCACCAATGTGAAAAAAATTGTGCAGGTAACGAGTCAACTACAACAAATTTAATATGGGATTAGAAAAAATTAATTCTAATTTATTGTATTAATAAAACTATTTTTTAGTATTATTATTTTGATTTTGCCGTGAAAACTATAAATAACACCCACATGTCATGACACACCACATGCACATTTTAGAATTCACCACTGTCACTTACACCAACCACTTGTCCATACACTATCGGTGCATGTTAGAGTACACCGGATTTCTGTTCTTTAACCGTCCCAATGACTATGTATCTTCTCATATACTAGTACTACTGCTCAAGTAATTTTTTTTTGGAACCGAGGTTAACCTGCAGACACTACAACCTCTAGTATAGCCTCTGCACTTTGTGAGCACTTTGCAGTCAATGATCGTTATGTATTTTACAAATAGCCAGTTCCAAGGAAGAAAATGCACTACAAATAATAGTTTTCTCACAATTCAAAACAAATAAAAAGATATTGATTTACATACTTTACTTTTAAATTGTACTCTTTCCTGATTGATCTTTTGGTGTTTACATATATAATCTGGAAGTCCTGAGAGGGTCTTGTATTCTCTGGAAGAGTCTCTGCTAAGAATCTCCCTTGTGCATCCTAGTGTCTCCTACAAATTTGTTGATATTGAAAGGTCTGTCTTTGTTATTTCAGCTAACTTGAGGATATTTCCTGTCTGCTTTCTTCAGATTTTGTTTATTTGTATGCAGTGAAGATGACCTGCTATGCACACGTGCT</genome_strand>
        <mrna_strand>GATTGGTGCTCCATTCTTCTCTTTGTTGAGGATAGTCTCACGAATCTTTGGACT.......................................................................................................................GAGAGAGATTCGATCTTC-ACAG--GA----GTTGGAAAGTTCTTCTGAGAAGCACGATACCGTGTCCAGATTCCTCTTTCAGACAGAATTTTGAAGTTGGTCAATTCATTGATCTCTTGCTCATTGCACAGTTCGTATAAACTGGAAATCCTGAAACTCAGAGCAACTCCTTTCATCCAATGCAG.........................................................................................AAACTAGAGCTTTAAGGGAACTGTAGCATTCTGCAAAAGCTATCTTCTCAGAGCTTCCACAGCAGTCATACCATCAGTGCGATCAATCTACCGCCCAAAGTTGTGGTGACAGTGTATTCTGATGAAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAAGATGACCTGCTATGCACACGTGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E212648" ref_strand="+" ref_description="SGN-E212648 [cLEC-73-I1]">
      <seq>aattttgaggttttttttaaagaggtaggggacttgatcagctgatgtttatgggtcaggtctttctgaattatattatatgatggtgatgcttggtcacatatacattcatagtgaagaaaatcttaataattatttaaaaccacagctattctctcctctaagttggatgggactcgcataaataaataaaataaaaaaatttccttcaatgtagatagtccctgcgttgcattatattattcaccgtgtaataatccccacacgtttatttaccacataacagtttttacattactataactgaataagtaatactttaatcaaataatgtcttactctctggtattgcaattttgtgatattactaagtaaagaagaaagatatagtgtgattatcttttgcttcatctttttgtgactgtctggcggagtatattcttgtgtagaaactgaggcctatgtctaaataaatgttgtccctttttacataggcaaggattgttatcttttgtttgattctagcatttatctctgttgaacattatcttttttcgagaaccgcctacagttccaactaaaaagaactaaaagtgtgaaataatttttcttatctcannttggaaaagtacttgagcctcccgatatcgggaagactcagtacttcaactagtctccatgttcctcgaatagatctcttagttgttgagaaggttgccaaccgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0291P19-bZFxm/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0291P19.2" temp_strand="+" temp_description="C02HBa0291P19.2  AC215435.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0291P19 sequenced_by:kribb upload_account_name:korea">
        <position start="134221" stop="135540"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="134521" g_stop="135240" g_length="720"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="725" r_length="725" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0291P19.2" gen_strand="+" ref_id="SGN-E212648" ref_strand="+">
        <total_alignment_score>0.981</total_alignment_score>
        <cumulative_length_of_scored_exons>720</cumulative_length_of_scored_exons>
        <coverage percentage="0.993" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0291P19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E212648" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="134521" e_stop="135240"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTTTGAGGTTTTTTTTAAAGAGGTAGGGGACTTGATCAGCTGATGTTTATGGGTCAGGTCTTTCTGAATTATATTATATGATGGTGATGCTTGGTCACATATACATTCATAGTGAAGAAAATCTTAATAATTATTTAAAACCACAGCTATTCTCTCCTCTAAGTTGGATGGGACTCGCATAAATAAATAAAATAAAAAAATTTCCTTCAATGTAGATAGTCCCTGCGTTGCATTATATTATTCACCGTGTAATAATCCCCACACGTTTATTTACCACATAACAGTTTTTACATTACTATAACTGAATAAGTAATACTTTAATCAAATAATGTCTTACTCTCTGGTATTGCAATTTTGTGATATTACTAAGTAAAGAAGAAAGATATAGTGTGATTATCTTTTGCTTCATCTTTTTGTGACTGTCTGGCGGAGTATATTCTTGTGTAGAAACTGAGGCCTATGTCTAAATAAATGTTGTCCCTTTTTACATAGGCAAGGATTGTTATCTTTTGTTTGATTCTAGCATTTATCTCTGTTGAACATTATCTTTTTTCGAGAACCGCCTACAGTTCCAACTAAAAAGAACTAAAAGTGTGAAATAATTTTTCATTATCTCA-GTT-G--AAGTAC-TGAGCCTCCCGATATCGGG-AGACTCAGTACTTCAACTAGTCTCCATGTTCCTCGAATAGATCTCTTAGTTGTTGAGAAGGTTGCCAACCGC</genome_strand>
        <mrna_strand>AATTTTGAGGTTTTTTTTAAAGAGGTAGGGGACTTGATCAGCTGATGTTTATGGGTCAGGTCTTTCTGAATTATATTATATGATGGTGATGCTTGGTCACATATACATTCATAGTGAAGAAAATCTTAATAATTATTTAAAACCACAGCTATTCTCTCCTCTAAGTTGGATGGGACTCGCATAAATAAATAAAATAAAAAAATTTCCTTCAATGTAGATAGTCCCTGCGTTGCATTATATTATTCACCGTGTAATAATCCCCACACGTTTATTTACCACATAACAGTTTTTACATTACTATAACTGAATAAGTAATACTTTAATCAAATAATGTCTTACTCTCTGGTATTGCAATTTTGTGATATTACTAAGTAAAGAAGAAAGATATAGTGTGATTATCTTTTGCTTCATCTTTTTGTGACTGTCTGGCGGAGTATATTCTTGTGTAGAAACTGAGGCCTATGTCTAAATAAATGTTGTCCCTTTTTACATAGGCAAGGATTGTTATCTTTTGTTTGATTCTAGCATTTATCTCTGTTGAACATTATCTTTTTTCGAGAACCGCCTACAGTTCCAACTAAAAAGAACTAAAAGTGTGAAATAATTTTTC-TTATCTCANNTTGGAAAAGTACTTGAGCCTCCCGATATCGGGAAGACTCAGTACTTCAACTAGTCTCCATGTTCCTCGAATAGATCTCTTAGTTGTTGAGAAGGTTGCCAACCGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>130</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="-" PGL_start="20862" PGL_stop="20323"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="20862" e_stop="20323"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="20862" e_stop="20323" e_length="540"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20862" stop="20323"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E324084" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20861" stop="20443"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E323997" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20860" stop="20378"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E324701" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATAATTTTCCATTAGGAAACATGGAATGCAGGATATAGAGTGGAAGGCTTCTTTTGTCTGATTTATTTTAGTTGTCGTTGATTCTTTTTTCCTGCTCTATTGTTCCTTCGTGTGTTTTATTCAAATGTGTTTTTTCTTGATATTTTTGTTATATATCCCTATTATTCTTTATGTGTTCTAACCTAGTTCAAGTATCCGACTTTGGTATGTTTTATGGATGTGGTGATGTTTTATTGATATGATTTGGTACAACATATCAAGCCTTTTTTCATCTATTAAAATTGTCACTGCCTTGTTTTAGTTTAGGTTTTTTCATTGTGAGAAGTATTGTCACATAACAGTGGTGATACGGGAGAGTACTTGATATGAAGCAGCGATGTTGAGATCAGATATCCAACTTTATTATTATTATTTTGATCCCGTATGAGTATTTCTGTTATATCTAATCATTGAGATAAATTTATAAGAGTAAAAGTGACTTACTTTGTAGGTAAATTATGAGTTTTCATGGTATCAAAAGGGAGCGAGTGACTCCTTGGA</gDNA_template>
            <first_frame> I  I  F  H  *  E  T  W  N  A  G  Y  R  V  E  G  F  F  C  L  I  Y  F  S  C  R  *  F  F  F  P  A  L  L  F  L  R  V  F  Y  S  N  V  F  F  L  D  I  F  V  I  Y  P  Y  Y  S  L  C  V  L  T  *  F  K  Y  P  T  L  V  C  F  M  D  V  V  M  F  Y  *  Y  D  L  V  Q  H  I  K  P  F  F  I  Y  *  N  C  H  C  L  V  L  V  *  V  F  S  L  *  E  V  L  S  H  N  S  G  D  T  G  E  Y  L  I  *  S  S  D  V  E  I  R  Y  P  T  L  L  L  L  F  *  S  R  M  S  I  S  V  I  S  N  H  *  D  K  F  I  R  V  K  V  T  Y  F  V  G  K  L  *  V  F  M  V  S  K  G  S  E  *  L  L  G </first_frame>
            <second_frame>  *  F  S  I  R  K  H  G  M  Q  D  I  E  W  K  A  S  F  V  *  F  I  L  V  V  V  D  S  F  F  L  L  Y  C  S  F  V  C  F  I  Q  M  C  F  F  L  I  F  L  L  Y  I  P  I  I  L  Y  V  F  *  P  S  S  S  I  R  L  W  Y  V  L  W  M  W  *  C  F  I  D  M  I  W  Y  N  I  S  S  L  F  S  S  I  K  I  V  T  A  L  F  *  F  R  F  F  H  C  E  K  Y  C  H  I  T  V  V  I  R  E  S  T  *  Y  E  A  A  M  L  R  S  D  I  Q  L  Y  Y  Y  Y  F  D  P  V  *  V  F  L  L  Y  L  I  I  E  I  N  L  *  E  *  K  *  L  T  L  *  V  N  Y  E  F  S  W  Y  Q  K  G  A  S  D  S  L   </second_frame>
            <third_frame>   N  F  P  L  G  N  M  E  C  R  I  *  S  G  R  L  L  L  S  D  L  F  *  L  S  L  I  L  F  S  C  S  I  V  P  S  C  V  L  F  K  C  V  F  S  *  Y  F  C  Y  I  S  L  L  F  F  M  C  S  N  L  V  Q  V  S  D  F  G  M  F  Y  G  C  G  D  V  L  L  I  *  F  G  T  T  Y  Q  A  F  F  H  L  L  K  L  S  L  P  C  F  S  L  G  F  F  I  V  R  S  I  V  T  *  Q  W  *  Y  G  R  V  L  D  M  K  Q  R  C  *  D  Q  I  S  N  F  I  I  I  I  L  I  P  Y  E  Y  F  C  Y  I  *  S  L  R  *  I  Y  K  S  K  S  D  L  L  C  R  *  I  M  S  F  H  G  I  K  R  E  R  V  T  P  W  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0291P19.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="+" PGL_start="26380" PGL_stop="27039"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="26380" e_stop="27039"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.959"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.959">
            <gDNA_exon_boundary e_start="26380" e_stop="27039" e_length="660"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26380" stop="27039"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E415868" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TAAACAGGAAGCTCTCTGAAAATTGTGAATTGTCTCTCCATCTTATTTCTGTGCTGCCACTTGCTAGACAAAAGTATAGTTGGACATCTTTCATGTGCAATACAGAATAGGTAAGCAATTAAATATCAAAAATATACACGATTGTATGTTCAAAACATTACAATGCCCATAACAAGGAAAAATGGAACTGGACGGAGAAGGCCTTAACTCGAAAAAGAAGGAAAGAAAACATACATGACACTACCTCAGACTACAAGTCCCATTACGGTAGCCGCACTTCTTGAAACGAAAATACCAATACTATGACTGCATCACCTTATTTTGTTCAACACATGTGGGTGCCTTGAATGTTTGACACTTCCACATTGGCCTCTCAAGCGGAAAAATGGGATTATTACTTGTAGTACCTTTGTTGATGTTCTCATCGAATGATGATGAACTCTTGGATTTCAAATCCTCTTTAGGGCTTGCTTGATCCCTGAAGCTGCAAATGCTGAGTGGTAACTTTTTCTGCTTAAGCCTTCCTTTCTTTTTCTCAATGCTGCAACTATCATTTACAGAATCCCCAACTTTCTCCTTTGAGATAATTGATTCTCTTTCCTTGTTTTCCATATTTACATTGTCAGCTTTACTAGAGTGTGATGCTTCCCCATTTTCCAT</gDNA_template>
            <first_frame> *  T  G  S  S  L  K  I  V  N  C  L  S  I  L  F  L  C  C  H  L  L  D  K  S  I  V  G  H  L  S  C  A  I  Q  N  R  *  A  I  K  Y  Q  K  Y  T  R  L  Y  V  Q  N  I  T  M  P  I  T  R  K  N  G  T  G  R  R  R  P  *  L  E  K  E  G  K  K  T  Y  M  T  L  P  Q  T  T  S  P  I  T  V  A  A  L  L  E  T  K  I  P  I  L  *  L  H  H  L  I  L  F  N  T  C  G  C  L  E  C  L  T  L  P  H  W  P  L  K  R  K  N  G  I  I  T  C  S  T  F  V  D  V  L  I  E  *  *  *  T  L  G  F  Q  I  L  F  R  A  C  L  I  P  E  A  A  N  A  E  W  *  L  F  L  L  K  P  S  F  L  F  L  N  A  A  T  I  I  Y  R  I  P  N  F  L  L  *  D  N  *  F  S  F  L  V  F  H  I  Y  I  V  S  F  T  R  V  *  C  F  P  I  F  H </first_frame>
            <second_frame>  K  Q  E  A  L  *  K  L  *  I  V  S  P  S  Y  F  C  A  A  T  C  *  T  K  V  *  L  D  I  F  H  V  Q  Y  R  I  G  K  Q  L  N  I  K  N  I  H  D  C  M  F  K  T  L  Q  C  P  *  Q  G  K  M  E  L  D  G  E  G  L  N  S  K  K  K  E  R  K  H  T  *  H  Y  L  R  L  Q  V  P  L  R  *  P  H  F  L  K  R  K  Y  Q  Y  Y  D  C  I  T  L  F  C  S  T  H  V  G  A  L  N  V  *  H  F  H  I  G  L  S  S  G  K  M  G  L  L  L  V  V  P  L  L  M  F  S  S  N  D  D  E  L  L  D  F  K  S  S  L  G  L  A  *  S  L  K  L  Q  M  L  S  G  N  F  F  C  L  S  L  P  F  F  F  S  M  L  Q  L  S  F  T  E  S  P  T  F  S  F  E  I  I  D  S  L  S  L  F  S  I  F  T  L  S  A  L  L  E  C  D  A  S  P  F  S   </second_frame>
            <third_frame>   N  R  K  L  S  E  N  C  E  L  S  L  H  L  I  S  V  L  P  L  A  R  Q  K  Y  S  W  T  S  F  M  C  N  T  E  *  V  S  N  *  I  S  K  I  Y  T  I  V  C  S  K  H  Y  N  A  H  N  K  E  K  W  N  W  T  E  K  A  L  T  R  K  R  R  K  E  N  I  H  D  T  T  S  D  Y  K  S  H  Y  G  S  R  T  S  *  N  E  N  T  N  T  M  T  A  S  P  Y  F  V  Q  H  M  W  V  P  *  M  F  D  T  S  T  L  A  S  Q  A  E  K  W  D  Y  Y  L  *  Y  L  C  *  C  S  H  R  M  M  M  N  S  W  I  S  N  P  L  *  G  L  L  D  P  *  S  C  K  C  *  V  V  T  F  S  A  *  A  F  L  S  F  S  Q  C  C  N  Y  H  L  Q  N  P  Q  L  S  P  L  R  *  L  I  L  F  P  C  F  P  Y  L  H  C  Q  L  Y  *  S  V  M  L  P  H  F  P  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0291P19.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="-" PGL_start="28396" PGL_stop="26383"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="28377" e_stop="26383"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.999"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.999">
            <gDNA_exon_boundary e_start="28377" e_stop="26383" e_length="1995"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28377" stop="27811"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E415867" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28377" stop="27859"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E437882" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28367" stop="27967"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E476531" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28345" stop="27654"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E687683" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28341" stop="28128"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E322055" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="27902" stop="27374"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E466840" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="27761" stop="27532"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E562901" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="27753" stop="27134"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E614869" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="27630" stop="27180"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E205280" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="27604" stop="26756"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E552956" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="27574" stop="27002"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E269588" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="27041" stop="26383"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E434434" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="27041" stop="26384"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E410862" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="27041" stop="26384"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E434433" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26927" stop="26466"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E355289" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26859" stop="26465"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E351674" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26859" stop="26465"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E357513" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCTTTCTTCACATCTCTCTCTTTTTTTCTCTCTCTCTAAAAACCCTAATTTCAACTTCTTCTGTAAAATGACAAGATCAGGTATTTAGCCTTCATTGATTCTCATTGTGTTCAATTCTCGGCGTTTCATCTTAATTGCACATAAAAAATTGGGACTTTTTTTAATGTTAAATTTTTATCTAAGGAGCTAAGTTCATTTAGATTTGCATAATTCTCTTGAATCAGCTGCTAATTATCCTGGATTATGGTGAATTACGTACAAATCATCTGTTTTTGATATTGGAAGGTTGGAAAATCTTGAACTGACCTGAATTTGATTCATTTTTTAGTCTGTTGGTTTATTTTTCTGCTCTCTGCTTGTGGGTTTGGATTGAATTTGGGATTGTTTGATTGATTCGGATTGAATTGAATGGAGCGATTGAGTTTTTGGTAGTTTAGGGTTAATAGTATGTGAATCTAATGTAGGGTTTGGAAATAACAAGCAGTCAGCTGGTAGTTTTGTTTTTATAAAACTTTGTGCTAATAAAGGTGTGATTTTTAATGTTGTTTTTGTAGTTTGAAAGTGTGTAGATGTAGGAAAAAGATGGAAGCTAATGTATGTGATATTAATCACTTGGATGCCGATGTGCTTTTGCCTCCACGTAAGCGGCTTCTTGCTGGATTGAAGAAGCAGAATTCTGATGTTTACTCATCTACCCCATCCCCACCAACTGTTAATAGTCCCCCGTGTGATTTTGATATCCGTCTTAATAATCTATTGAAGTCTCATTTTGGAGACTCTAATCGATCTAATGAGGAGATTGCTGAGGCCTCAAGATTGGCAGCTCTAGAAGCTGTGAAGGCTGCAAAAGCTGCAAGAGCCATTGCAGAAGAGAAGGCTGCGAAAGCAGCAAAGGCTGTGGCTGCTGCTAAGAGCGCTCTAGAATTGGTTGCCACTCTCTCTGATGAGGGAACCAGTAGGGACAAACATTTGAAGAGGAATAAGATGAAAAAACATGTTCCTGTTCAGACGCTGTATAATAAGAATAAGGGGACTGATGATTGTAGAACAGATGAAGAGTTAGCTCGGACGTTGCATAGGGCCATTAATAGCTCTCCAAGAATTTTGAAGAACTCAACATCTGACTCAAGAAATCAAAAACATAAGAGGCTGAAGAGGTCTTCTCCTTCTGAAAAATCTAAGCTTCAGACTGGAAGTACATCCGTGGAAGGAAACTGTCCTTCCACGAGCAATGGGAATGGTTTTACTAGAGAAAGAGAGTCAGATAGGCATATCTCGGATAAAGACCTTGTTAGAGTAGATTTAAACACAAAATTTAATAAATCTGACCTCACAAAAATGGAAAATGGGGAAGCATCACACTCTAGTAAAGCTGACAATGTAAATATGGAAAACAAGGAAAGAGAATCAATTATCTCAAAGGAGAAAGTTGGGGATTCTGTAAATGATAGTTGCAGCATTGAGAAAAAGAAAGGAAGGCTTAAGCAGAAAAAGTTACCACTCAGCATTTGCAGCTTCAGGGATCAAGCAAGCCCTAAAGAGGATTTGAAATCCAAGAGTTCATCATCATTCGATGAGAACATCAACAAAGGTACTACAAGTAATAATCCCATTTTTCCGCTTGAGAGGCCAATGTGGAAGTGTCAAACATTCAAGGCACCCACATGTGTTGAACAAAATAAGGTGATGCAGTCATAGTATTGGTATTTTCGTTTCAAGAAGTGCGGCTACCGTAATGGGACTTGTAGTCTGAGGTAGTGTCATGTATGTTTTCTTTCCTTCTTTTTCGAGTTAAGGCCTTCTCCGTCCAGTTCCATTTTTCCTTGTTATGGGCATTGTAATGTTTTGAACATACAATCGTGTATATTTTTGATATTTAATTGCTTACCTATTCTGTATTGCACATGAAAGATGTCCAACTATACTTTTGTCTAGCAAGTGGCAGCACAGAAATAAGATGGAGAGACAATTCACAATTTTCAGAGAGCTTCCTGT</gDNA_template>
            <first_frame> S  F  F  T  S  L  S  F  F  L  S  L  *  K  P  *  F  Q  L  L  L  *  N  D  K  I  R  Y  L  A  F  I  D  S  H  C  V  Q  F  S  A  F  H  L  N  C  T  *  K  I  G  T  F  F  N  V  K  F  L  S  K  E  L  S  S  F  R  F  A  *  F  S  *  I  S  C  *  L  S  W  I  M  V  N  Y  V  Q  I  I  C  F  *  Y  W  K  V  G  K  S  *  T  D  L  N  L  I  H  F  L  V  C  W  F  I  F  L  L  S  A  C  G  F  G  L  N  L  G  L  F  D  *  F  G  L  N  *  M  E  R  L  S  F  W  *  F  R  V  N  S  M  *  I  *  C  R  V  W  K  *  Q  A  V  S  W  *  F  C  F  Y  K  T  L  C  *  *  R  C  D  F  *  C  C  F  C  S  L  K  V  C  R  C  R  K  K  M  E  A  N  V  C  D  I  N  H  L  D  A  D  V  L  L  P  P  R  K  R  L  L  A  G  L  K  K  Q  N  S  D  V  Y  S  S  T  P  S  P  P  T  V  N  S  P  P  C  D  F  D  I  R  L  N  N  L  L  K  S  H  F  G  D  S  N  R  S  N  E  E  I  A  E  A  S  R  L  A  A  L  E  A  V  K  A  A  K  A  A  R  A  I  A  E  E  K  A  A  K  A  A  K  A  V  A  A  A  K  S  A  L  E  L  V  A  T  L  S  D  E  G  T  S  R  D  K  H  L  K  R  N  K  M  K  K  H  V  P  V  Q  T  L  Y  N  K  N  K  G  T  D  D  C  R  T  D  E  E  L  A  R  T  L  H  R  A  I  N  S  S  P  R  I  L  K  N  S  T  S  D  S  R  N  Q  K  H  K  R  L  K  R  S  S  P  S  E  K  S  K  L  Q  T  G  S  T  S  V  E  G  N  C  P  S  T  S  N  G  N  G  F  T  R  E  R  E  S  D  R  H  I  S  D  K  D  L  V  R  V  D  L  N  T  K  F  N  K  S  D  L  T  K  M  E  N  G  E  A  S  H  S  S  K  A  D  N  V  N  M  E  N  K  E  R  E  S  I  I  S  K  E  K  V  G  D  S  V  N  D  S  C  S  I  E  K  K  K  G  R  L  K  Q  K  K  L  P  L  S  I  C  S  F  R  D  Q  A  S  P  K  E  D  L  K  S  K  S  S  S  S  F  D  E  N  I  N  K  G  T  T  S  N  N  P  I  F  P  L  E  R  P  M  W  K  C  Q  T  F  K  A  P  T  C  V  E  Q  N  K  V  M  Q  S  *  Y  W  Y  F  R  F  K  K  C  G  Y  R  N  G  T  C  S  L  R  *  C  H  V  C  F  L  S  F  F  F  E  L  R  P  S  P  S  S  S  I  F  P  C  Y  G  H  C  N  V  L  N  I  Q  S  C  I  F  L  I  F  N  C  L  P  I  L  Y  C  T  *  K  M  S  N  Y  T  F  V  *  Q  V  A  A  Q  K  *  D  G  E  T  I  H  N  F  Q  R  A  S  C </first_frame>
            <second_frame>  L  S  S  H  L  S  L  F  F  S  L  S  K  N  P  N  F  N  F  F  C  K  M  T  R  S  G  I  *  P  S  L  I  L  I  V  F  N  S  R  R  F  I  L  I  A  H  K  K  L  G  L  F  L  M  L  N  F  Y  L  R  S  *  V  H  L  D  L  H  N  S  L  E  S  A  A  N  Y  P  G  L  W  *  I  T  Y  K  S  S  V  F  D  I  G  R  L  E  N  L  E  L  T  *  I  *  F  I  F  *  S  V  G  L  F  F  C  S  L  L  V  G  L  D  *  I  W  D  C  L  I  D  S  D  *  I  E  W  S  D  *  V  F  G  S  L  G  L  I  V  C  E  S  N  V  G  F  G  N  N  K  Q  S  A  G  S  F  V  F  I  K  L  C  A  N  K  G  V  I  F  N  V  V  F  V  V  *  K  C  V  D  V  G  K  R  W  K  L  M  Y  V  I  L  I  T  W  M  P  M  C  F  C  L  H  V  S  G  F  L  L  D  *  R  S  R  I  L  M  F  T  H  L  P  H  P  H  Q  L  L  I  V  P  R  V  I  L  I  S  V  L  I  I  Y  *  S  L  I  L  E  T  L  I  D  L  M  R  R  L  L  R  P  Q  D  W  Q  L  *  K  L  *  R  L  Q  K  L  Q  E  P  L  Q  K  R  R  L  R  K  Q  Q  R  L  W  L  L  L  R  A  L  *  N  W  L  P  L  S  L  M  R  E  P  V  G  T  N  I  *  R  G  I  R  *  K  N  M  F  L  F  R  R  C  I  I  R  I  R  G  L  M  I  V  E  Q  M  K  S  *  L  G  R  C  I  G  P  L  I  A  L  Q  E  F  *  R  T  Q  H  L  T  Q  E  I  K  N  I  R  G  *  R  G  L  L  L  L  K  N  L  S  F  R  L  E  V  H  P  W  K  E  T  V  L  P  R  A  M  G  M  V  L  L  E  K  E  S  Q  I  G  I  S  R  I  K  T  L  L  E  *  I  *  T  Q  N  L  I  N  L  T  S  Q  K  W  K  M  G  K  H  H  T  L  V  K  L  T  M  *  I  W  K  T  R  K  E  N  Q  L  S  Q  R  R  K  L  G  I  L  *  M  I  V  A  A  L  R  K  R  K  E  G  L  S  R  K  S  Y  H  S  A  F  A  A  S  G  I  K  Q  A  L  K  R  I  *  N  P  R  V  H  H  H  S  M  R  T  S  T  K  V  L  Q  V  I  I  P  F  F  R  L  R  G  Q  C  G  S  V  K  H  S  R  H  P  H  V  L  N  K  I  R  *  C  S  H  S  I  G  I  F  V  S  R  S  A  A  T  V  M  G  L  V  V  *  G  S  V  M  Y  V  F  F  P  S  F  S  S  *  G  L  L  R  P  V  P  F  F  L  V  M  G  I  V  M  F  *  T  Y  N  R  V  Y  F  *  Y  L  I  A  Y  L  F  C  I  A  H  E  R  C  P  T  I  L  L  S  S  K  W  Q  H  R  N  K  M  E  R  Q  F  T  I  F  R  E  L  P   </second_frame>
            <third_frame>   F  L  H  I  S  L  F  F  S  L  S  L  K  T  L  I  S  T  S  S  V  K  *  Q  D  Q  V  F  S  L  H  *  F  S  L  C  S  I  L  G  V  S  S  *  L  H  I  K  N  W  D  F  F  *  C  *  I  F  I  *  G  A  K  F  I  *  I  C  I  I  L  L  N  Q  L  L  I  I  L  D  Y  G  E  L  R  T  N  H  L  F  L  I  L  E  G  W  K  I  L  N  *  P  E  F  D  S  F  F  S  L  L  V  Y  F  S  A  L  C  L  W  V  W  I  E  F  G  I  V  *  L  I  R  I  E  L  N  G  A  I  E  F  L  V  V  *  G  *  *  Y  V  N  L  M  *  G  L  E  I  T  S  S  Q  L  V  V  L  F  L  *  N  F  V  L  I  K  V  *  F  L  M  L  F  L  *  F  E  S  V  *  M  *  E  K  D  G  S  *  C  M  *  Y  *  S  L  G  C  R  C  A  F  A  S  T  *  A  A  S  C  W  I  E  E  A  E  F  *  C  L  L  I  Y  P  I  P  T  N  C  *  *  S  P  V  *  F  *  Y  P  S  *  *  S  I  E  V  S  F  W  R  L  *  S  I  *  *  G  D  C  *  G  L  K  I  G  S  S  R  S  C  E  G  C  K  S  C  K  S  H  C  R  R  E  G  C  E  S  S  K  G  C  G  C  C  *  E  R  S  R  I  G  C  H  S  L  *  *  G  N  Q  *  G  Q  T  F  E  E  E  *  D  E  K  T  C  S  C  S  D  A  V  *  *  E  *  G  D  *  *  L  *  N  R  *  R  V  S  S  D  V  A  *  G  H  *  *  L  S  K  N  F  E  E  L  N  I  *  L  K  K  S  K  T  *  E  A  E  E  V  F  S  F  *  K  I  *  A  S  D  W  K  Y  I  R  G  R  K  L  S  F  H  E  Q  W  E  W  F  Y  *  R  K  R  V  R  *  A  Y  L  G  *  R  P  C  *  S  R  F  K  H  K  I  *  *  I  *  P  H  K  N  G  K  W  G  S  I  T  L  *  *  S  *  Q  C  K  Y  G  K  Q  G  K  R  I  N  Y  L  K  G  E  S  W  G  F  C  K  *  *  L  Q  H  *  E  K  E  R  K  A  *  A  E  K  V  T  T  Q  H  L  Q  L  Q  G  S  S  K  P  *  R  G  F  E  I  Q  E  F  I  I  I  R  *  E  H  Q  Q  R  Y  Y  K  *  *  S  H  F  S  A  *  E  A  N  V  E  V  S  N  I  Q  G  T  H  M  C  *  T  K  *  G  D  A  V  I  V  L  V  F  S  F  Q  E  V  R  L  P  *  W  D  L  *  S  E  V  V  S  C  M  F  S  F  L  L  F  R  V  K  A  F  S  V  Q  F  H  F  S  L  L  W  A  L  *  C  F  E  H  T  I  V  Y  I  F  D  I  *  L  L  T  Y  S  V  L  H  M  K  D  V  Q  L  Y  F  C  L  A  S  G  S  T  E  I  R  W  R  D  N  S  Q  F  S  E  S  F  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0291P19.2" strand="-"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="27837" stop="26680"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1155</number_coding_nucleotides>
                  <number_encoded_amino_acids>385</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CCFCSLKVCRCRKKMEANVCDINHLDADVLLPPRKRLLAGLKKQNSDVYSSTPSPPTVNSPPCDFDIRLNNLLKSHFGDSNRSNEEIAEASRLAALEAVKAAKAARAIAEEKAAKAAKAVAAAKSALELVATLSDEGTSRDKHLKRNKMKKHVPVQTLYNKNKGTDDCRTDEELARTLHRAINSSPRILKNSTSDSRNQKHKRLKRSSPSEKSKLQTGSTSVEGNCPSTSNGNGFTRERESDRHISDKDLVRVDLNTKFNKSDLTKMENGEASHSSKADNVNMENKERESIISKEKVGDSVNDSCSIEKKKGRLKQKKLPLSICSFRDQASPKEDLKSKSSSSFDENINKGTTSNNPIFPLERPMWKCQTFKAPTCVEQNKVMQS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="28396" e_stop="28298"/>
            <exon e_start="27823" e_stop="26383"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.969" acc_prob="0.963" e_score="1.000"/>
          <exon-only e_score="0.999"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="28396" e_stop="28298" e_length="99"/>
          </exon>
          <intron i_serial="1" don_prob="0.969" acc_prob="0.963">
            <gDNA_intron_boundary i_start="28297" i_stop="27824" i_length="474"/>
          </intron>
          <exon e_serial="2" e_score="0.999">
            <gDNA_exon_boundary e_start="27823" e_stop="26383" e_length="1441"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28396" stop="28298"/>
              <exon start="27823" stop="27298"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E585775" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28386" stop="28298"/>
              <exon start="27823" stop="27084"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E703247" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="27761" stop="27532"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E562901" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="27753" stop="27134"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E614869" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="27630" stop="27180"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E205280" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="27604" stop="26756"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E552956" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="27574" stop="27002"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E269588" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="27041" stop="26383"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E434434" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="27041" stop="26384"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E410862" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="27041" stop="26384"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E434433" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26927" stop="26466"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E355289" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26859" stop="26465"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E351674" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26859" stop="26465"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E357513" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTTTTCAACACACCATCTTTCTTTCTTCACATCTCTCTCTTTTTTTCTCTCTCTCTAAAAACCCTAATTTCAACTTCTTCTGTAAAATGACAAGATCAG : TTTGAAAGTGTGTAGATGTAGGAAAAAGATGGAAGCTAATGTATGTGATATTAATCACTTGGATGCCGATGTGCTTTTGCCTCCACGTAAGCGGCTTCTTGCTGGATTGAAGAAGCAGAATTCTGATGTTTACTCATCTACCCCATCCCCACCAACTGTTAATAGTCCCCCGTGTGATTTTGATATCCGTCTTAATAATCTATTGAAGTCTCATTTTGGAGACTCTAATCGATCTAATGAGGAGATTGCTGAGGCCTCAAGATTGGCAGCTCTAGAAGCTGTGAAGGCTGCAAAAGCTGCAAGAGCCATTGCAGAAGAGAAGGCTGCGAAAGCAGCAAAGGCTGTGGCTGCTGCTAAGAGCGCTCTAGAATTGGTTGCCACTCTCTCTGATGAGGGAACCAGTAGGGACAAACATTTGAAGAGGAATAAGATGAAAAAACATGTTCCTGTTCAGACGCTGTATAATAAGAATAAGGGGACTGATGATTGTAGAACAGATGAAGAGTTAGCTCGGACGTTGCATAGGGCCATTAATAGCTCTCCAAGAATTTTGAAGAACTCAACATCTGACTCAAGAAATCAAAAACATAAGAGGCTGAAGAGGTCTTCTCCTTCTGAAAAATCTAAGCTTCAGACTGGAAGTACATCCGTGGAAGGAAACTGTCCTTCCACGAGCAATGGGAATGGTTTTACTAGAGAAAGAGAGTCAGATAGGCATATCTCGGATAAAGACCTTGTTAGAGTAGATTTAAACACAAAATTTAATAAATCTGACCTCACAAAAATGGAAAATGGGGAAGCATCACACTCTAGTAAAGCTGACAATGTAAATATGGAAAACAAGGAAAGAGAATCAATTATCTCAAAGGAGAAAGTTGGGGATTCTGTAAATGATAGTTGCAGCATTGAGAAAAAGAAAGGAAGGCTTAAGCAGAAAAAGTTACCACTCAGCATTTGCAGCTTCAGGGATCAAGCAAGCCCTAAAGAGGATTTGAAATCCAAGAGTTCATCATCATTCGATGAGAACATCAACAAAGGTACTACAAGTAATAATCCCATTTTTCCGCTTGAGAGGCCAATGTGGAAGTGTCAAACATTCAAGGCACCCACATGTGTTGAACAAAATAAGGTGATGCAGTCATAGTATTGGTATTTTCGTTTCAAGAAGTGCGGCTACCGTAATGGGACTTGTAGTCTGAGGTAGTGTCATGTATGTTTTCTTTCCTTCTTTTTCGAGTTAAGGCCTTCTCCGTCCAGTTCCATTTTTCCTTGTTATGGGCATTGTAATGTTTTGAACATACAATCGTGTATATTTTTGATATTTAATTGCTTACCTATTCTGTATTGCACATGAAAGATGTCCAACTATACTTTTGTCTAGCAAGTGGCAGCACAGAAATAAGATGGAGAGACAATTCACAATTTTCAGAGAGCTTCCTGT</gDNA_template>
            <first_frame> F  F  N  T  P  S  F  F  L  H  I  S  L  F  F  S  L  S  L  K  T  L  I  S  T  S  S  V  K  *  Q  D  Q  :  F  E  S  V  *  M  *  E  K  D  G  S  *  C  M  *  Y  *  S  L  G  C  R  C  A  F  A  S  T  *  A  A  S  C  W  I  E  E  A  E  F  *  C  L  L  I  Y  P  I  P  T  N  C  *  *  S  P  V  *  F  *  Y  P  S  *  *  S  I  E  V  S  F  W  R  L  *  S  I  *  *  G  D  C  *  G  L  K  I  G  S  S  R  S  C  E  G  C  K  S  C  K  S  H  C  R  R  E  G  C  E  S  S  K  G  C  G  C  C  *  E  R  S  R  I  G  C  H  S  L  *  *  G  N  Q  *  G  Q  T  F  E  E  E  *  D  E  K  T  C  S  C  S  D  A  V  *  *  E  *  G  D  *  *  L  *  N  R  *  R  V  S  S  D  V  A  *  G  H  *  *  L  S  K  N  F  E  E  L  N  I  *  L  K  K  S  K  T  *  E  A  E  E  V  F  S  F  *  K  I  *  A  S  D  W  K  Y  I  R  G  R  K  L  S  F  H  E  Q  W  E  W  F  Y  *  R  K  R  V  R  *  A  Y  L  G  *  R  P  C  *  S  R  F  K  H  K  I  *  *  I  *  P  H  K  N  G  K  W  G  S  I  T  L  *  *  S  *  Q  C  K  Y  G  K  Q  G  K  R  I  N  Y  L  K  G  E  S  W  G  F  C  K  *  *  L  Q  H  *  E  K  E  R  K  A  *  A  E  K  V  T  T  Q  H  L  Q  L  Q  G  S  S  K  P  *  R  G  F  E  I  Q  E  F  I  I  I  R  *  E  H  Q  Q  R  Y  Y  K  *  *  S  H  F  S  A  *  E  A  N  V  E  V  S  N  I  Q  G  T  H  M  C  *  T  K  *  G  D  A  V  I  V  L  V  F  S  F  Q  E  V  R  L  P  *  W  D  L  *  S  E  V  V  S  C  M  F  S  F  L  L  F  R  V  K  A  F  S  V  Q  F  H  F  S  L  L  W  A  L  *  C  F  E  H  T  I  V  Y  I  F  D  I  *  L  L  T  Y  S  V  L  H  M  K  D  V  Q  L  Y  F  C  L  A  S  G  S  T  E  I  R  W  R  D  N  S  Q  F  S  E  S  F  L  </first_frame>
            <second_frame>  F  S  T  H  H  L  S  F  F  T  S  L  S  F  F  L  S  L  *  K  P  *  F  Q  L  L  L  *  N  D  K  I  S :   L  K  V  C  R  C  R  K  K  M  E  A  N  V  C  D  I  N  H  L  D  A  D  V  L  L  P  P  R  K  R  L  L  A  G  L  K  K  Q  N  S  D  V  Y  S  S  T  P  S  P  P  T  V  N  S  P  P  C  D  F  D  I  R  L  N  N  L  L  K  S  H  F  G  D  S  N  R  S  N  E  E  I  A  E  A  S  R  L  A  A  L  E  A  V  K  A  A  K  A  A  R  A  I  A  E  E  K  A  A  K  A  A  K  A  V  A  A  A  K  S  A  L  E  L  V  A  T  L  S  D  E  G  T  S  R  D  K  H  L  K  R  N  K  M  K  K  H  V  P  V  Q  T  L  Y  N  K  N  K  G  T  D  D  C  R  T  D  E  E  L  A  R  T  L  H  R  A  I  N  S  S  P  R  I  L  K  N  S  T  S  D  S  R  N  Q  K  H  K  R  L  K  R  S  S  P  S  E  K  S  K  L  Q  T  G  S  T  S  V  E  G  N  C  P  S  T  S  N  G  N  G  F  T  R  E  R  E  S  D  R  H  I  S  D  K  D  L  V  R  V  D  L  N  T  K  F  N  K  S  D  L  T  K  M  E  N  G  E  A  S  H  S  S  K  A  D  N  V  N  M  E  N  K  E  R  E  S  I  I  S  K  E  K  V  G  D  S  V  N  D  S  C  S  I  E  K  K  K  G  R  L  K  Q  K  K  L  P  L  S  I  C  S  F  R  D  Q  A  S  P  K  E  D  L  K  S  K  S  S  S  S  F  D  E  N  I  N  K  G  T  T  S  N  N  P  I  F  P  L  E  R  P  M  W  K  C  Q  T  F  K  A  P  T  C  V  E  Q  N  K  V  M  Q  S  *  Y  W  Y  F  R  F  K  K  C  G  Y  R  N  G  T  C  S  L  R  *  C  H  V  C  F  L  S  F  F  F  E  L  R  P  S  P  S  S  S  I  F  P  C  Y  G  H  C  N  V  L  N  I  Q  S  C  I  F  L  I  F  N  C  L  P  I  L  Y  C  T  *  K  M  S  N  Y  T  F  V  *  Q  V  A  A  Q  K  *  D  G  E  T  I  H  N  F  Q  R  A  S  C </second_frame>
            <third_frame>   F  Q  H  T  I  F  L  S  S  H  L  S  L  F  F  S  L  S  K  N  P  N  F  N  F  F  C  K  M  T  R  S   : V  *  K  C  V  D  V  G  K  R  W  K  L  M  Y  V  I  L  I  T  W  M  P  M  C  F  C  L  H  V  S  G  F  L  L  D  *  R  S  R  I  L  M  F  T  H  L  P  H  P  H  Q  L  L  I  V  P  R  V  I  L  I  S  V  L  I  I  Y  *  S  L  I  L  E  T  L  I  D  L  M  R  R  L  L  R  P  Q  D  W  Q  L  *  K  L  *  R  L  Q  K  L  Q  E  P  L  Q  K  R  R  L  R  K  Q  Q  R  L  W  L  L  L  R  A  L  *  N  W  L  P  L  S  L  M  R  E  P  V  G  T  N  I  *  R  G  I  R  *  K  N  M  F  L  F  R  R  C  I  I  R  I  R  G  L  M  I  V  E  Q  M  K  S  *  L  G  R  C  I  G  P  L  I  A  L  Q  E  F  *  R  T  Q  H  L  T  Q  E  I  K  N  I  R  G  *  R  G  L  L  L  L  K  N  L  S  F  R  L  E  V  H  P  W  K  E  T  V  L  P  R  A  M  G  M  V  L  L  E  K  E  S  Q  I  G  I  S  R  I  K  T  L  L  E  *  I  *  T  Q  N  L  I  N  L  T  S  Q  K  W  K  M  G  K  H  H  T  L  V  K  L  T  M  *  I  W  K  T  R  K  E  N  Q  L  S  Q  R  R  K  L  G  I  L  *  M  I  V  A  A  L  R  K  R  K  E  G  L  S  R  K  S  Y  H  S  A  F  A  A  S  G  I  K  Q  A  L  K  R  I  *  N  P  R  V  H  H  H  S  M  R  T  S  T  K  V  L  Q  V  I  I  P  F  F  R  L  R  G  Q  C  G  S  V  K  H  S  R  H  P  H  V  L  N  K  I  R  *  C  S  H  S  I  G  I  F  V  S  R  S  A  A  T  V  M  G  L  V  V  *  G  S  V  M  Y  V  F  F  P  S  F  S  S  *  G  L  L  R  P  V  P  F  F  L  V  M  G  I  V  M  F  *  T  Y  N  R  V  Y  F  *  Y  L  I  A  Y  L  F  C  I  A  H  E  R  C  P  T  I  L  L  S  S  K  W  Q  H  R  N  K  M  E  R  Q  F  T  I  F  R  E  L  P   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0291P19.2" strand="-"/>
                <serials PGL_serial="3" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="28311" stop="28298"/>
                    <exon start="27823" stop="26680"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1155</number_coding_nucleotides>
                  <number_encoded_amino_acids>385</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NDKISLKVCRCRKKMEANVCDINHLDADVLLPPRKRLLAGLKKQNSDVYSSTPSPPTVNSPPCDFDIRLNNLLKSHFGDSNRSNEEIAEASRLAALEAVKAAKAARAIAEEKAAKAAKAVAAAKSALELVATLSDEGTSRDKHLKRNKMKKHVPVQTLYNKNKGTDDCRTDEELARTLHRAINSSPRILKNSTSDSRNQKHKRLKRSSPSEKSKLQTGSTSVEGNCPSTSNGNGFTRERESDRHISDKDLVRVDLNTKFNKSDLTKMENGEASHSSKADNVNMENKERESIISKEKVGDSVNDSCSIEKKKGRLKQKKLPLSICSFRDQASPKEDLKSKSSSSFDENINKGTTSNNPIFPLERPMWKCQTFKAPTCVEQNKVMQS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="28396" e_stop="28298"/>
            <exon e_start="27823" e_stop="27128"/>
            <exon e_start="26974" e_stop="26465"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.969" acc_prob="0.963" e_score="0.939"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="0.991"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.939">
            <gDNA_exon_boundary e_start="28396" e_stop="28298" e_length="99"/>
          </exon>
          <intron i_serial="1" don_prob="0.969" acc_prob="0.963">
            <gDNA_intron_boundary i_start="28297" i_stop="27824" i_length="474"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="27823" e_stop="27128" e_length="696"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="27127" i_stop="26975" i_length="153"/>
          </intron>
          <exon e_serial="3" e_score="0.991">
            <gDNA_exon_boundary e_start="26974" e_stop="26465" e_length="510"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28396" stop="28298"/>
              <exon start="27823" stop="27298"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E585775" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28342" stop="28298"/>
              <exon start="27823" stop="27128"/>
              <exon start="26974" stop="26840"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E727854" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="27761" stop="27532"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E562901" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="27753" stop="27134"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E614869" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="27630" stop="27180"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E205280" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26927" stop="26466"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E355289" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26859" stop="26465"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E351674" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26859" stop="26465"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E357513" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTTTTCAACACACCATCTTTCTTTCTTCACATCTCTCTCTTTTTTTCTCTCTCTCTAAAAACCCTAATTTCAACTTCTTCTGTAAAATGACAAGATCAG : TTTGAAAGTGTGTAGATGTAGGAAAAAGATGGAAGCTAATGTATGTGATATTAATCACTTGGATGCCGATGTGCTTTTGCCTCCACGTAAGCGGCTTCTTGCTGGATTGAAGAAGCAGAATTCTGATGTTTACTCATCTACCCCATCCCCACCAACTGTTAATAGTCCCCCGTGTGATTTTGATATCCGTCTTAATAATCTATTGAAGTCTCATTTTGGAGACTCTAATCGATCTAATGAGGAGATTGCTGAGGCCTCAAGATTGGCAGCTCTAGAAGCTGTGAAGGCTGCAAAAGCTGCAAGAGCCATTGCAGAAGAGAAGGCTGCGAAAGCAGCAAAGGCTGTGGCTGCTGCTAAGAGCGCTCTAGAATTGGTTGCCACTCTCTCTGATGAGGGAACCAGTAGGGACAAACATTTGAAGAGGAATAAGATGAAAAAACATGTTCCTGTTCAGACGCTGTATAATAAGAATAAGGGGACTGATGATTGTAGAACAGATGAAGAGTTAGCTCGGACGTTGCATAGGGCCATTAATAGCTCTCCAAGAATTTTGAAGAACTCAACATCTGACTCAAGAAATCAAAAACATAAGAGGCTGAAGAGGTCTTCTCCTTCTGAAAAATCTAAGCTTCAGACTGGAAGTACATCCGTGGAAGGAAACTGTCCTTCCACGAGCAATGGGAATGGTTTTACTAG : AGAATCAATTATCTCAAAGGAGAAAGTTGGGGATTCTGTAAATGATAGTTGCAGCATTGAGAAAAAGAAAGGAAGGCTTAAGCAGAAAAAGTTACCACTCAGCATTTGCAGCTTCAGGGATCAAGCAAGCCCTAAAGAGGATTTGAAATCCAAGAGTTCATCATCATTCGATGAGAACATCAACAAAGGTACTACAAGTAATAATCCCATTTTTCCGCTTGAGAGGCCAATGTGGAAGTGTCAAACATTCAAGGCACCCACATGTGTTGAACAAAATAAGGTGATGCAGTCATAGTATTGGTATTTTCGTTTCAAGAAGTGCGGCTACCGTAATGGGACTTGTAGTCTGAGGTAGTGTCATGTATGTTTTCTTTCCTTCTTTTTCGAGTTAAGGCCTTCTCCGTCCAGTTCCATTTTTCCTTGTTATGGGCATTGTAATGTTTTGAACATACAATCGTGTATATTTTTGATATTTAATTGCTTACCTATTCTGTATTGCACATGAAAGAT</gDNA_template>
            <first_frame> F  F  N  T  P  S  F  F  L  H  I  S  L  F  F  S  L  S  L  K  T  L  I  S  T  S  S  V  K  *  Q  D  Q  :  F  E  S  V  *  M  *  E  K  D  G  S  *  C  M  *  Y  *  S  L  G  C  R  C  A  F  A  S  T  *  A  A  S  C  W  I  E  E  A  E  F  *  C  L  L  I  Y  P  I  P  T  N  C  *  *  S  P  V  *  F  *  Y  P  S  *  *  S  I  E  V  S  F  W  R  L  *  S  I  *  *  G  D  C  *  G  L  K  I  G  S  S  R  S  C  E  G  C  K  S  C  K  S  H  C  R  R  E  G  C  E  S  S  K  G  C  G  C  C  *  E  R  S  R  I  G  C  H  S  L  *  *  G  N  Q  *  G  Q  T  F  E  E  E  *  D  E  K  T  C  S  C  S  D  A  V  *  *  E  *  G  D  *  *  L  *  N  R  *  R  V  S  S  D  V  A  *  G  H  *  *  L  S  K  N  F  E  E  L  N  I  *  L  K  K  S  K  T  *  E  A  E  E  V  F  S  F  *  K  I  *  A  S  D  W  K  Y  I  R  G  R  K  L  S  F  H  E  Q  W  E  W  F  Y  *  :  R  I  N  Y  L  K  G  E  S  W  G  F  C  K  *  *  L  Q  H  *  E  K  E  R  K  A  *  A  E  K  V  T  T  Q  H  L  Q  L  Q  G  S  S  K  P  *  R  G  F  E  I  Q  E  F  I  I  I  R  *  E  H  Q  Q  R  Y  Y  K  *  *  S  H  F  S  A  *  E  A  N  V  E  V  S  N  I  Q  G  T  H  M  C  *  T  K  *  G  D  A  V  I  V  L  V  F  S  F  Q  E  V  R  L  P  *  W  D  L  *  S  E  V  V  S  C  M  F  S  F  L  L  F  R  V  K  A  F  S  V  Q  F  H  F  S  L  L  W  A  L  *  C  F  E  H  T  I  V  Y  I  F  D  I  *  L  L  T  Y  S  V  L  H  M  K  D </first_frame>
            <second_frame>  F  S  T  H  H  L  S  F  F  T  S  L  S  F  F  L  S  L  *  K  P  *  F  Q  L  L  L  *  N  D  K  I  S :   L  K  V  C  R  C  R  K  K  M  E  A  N  V  C  D  I  N  H  L  D  A  D  V  L  L  P  P  R  K  R  L  L  A  G  L  K  K  Q  N  S  D  V  Y  S  S  T  P  S  P  P  T  V  N  S  P  P  C  D  F  D  I  R  L  N  N  L  L  K  S  H  F  G  D  S  N  R  S  N  E  E  I  A  E  A  S  R  L  A  A  L  E  A  V  K  A  A  K  A  A  R  A  I  A  E  E  K  A  A  K  A  A  K  A  V  A  A  A  K  S  A  L  E  L  V  A  T  L  S  D  E  G  T  S  R  D  K  H  L  K  R  N  K  M  K  K  H  V  P  V  Q  T  L  Y  N  K  N  K  G  T  D  D  C  R  T  D  E  E  L  A  R  T  L  H  R  A  I  N  S  S  P  R  I  L  K  N  S  T  S  D  S  R  N  Q  K  H  K  R  L  K  R  S  S  P  S  E  K  S  K  L  Q  T  G  S  T  S  V  E  G  N  C  P  S  T  S  N  G  N  G  F  T  R :   E  S  I  I  S  K  E  K  V  G  D  S  V  N  D  S  C  S  I  E  K  K  K  G  R  L  K  Q  K  K  L  P  L  S  I  C  S  F  R  D  Q  A  S  P  K  E  D  L  K  S  K  S  S  S  S  F  D  E  N  I  N  K  G  T  T  S  N  N  P  I  F  P  L  E  R  P  M  W  K  C  Q  T  F  K  A  P  T  C  V  E  Q  N  K  V  M  Q  S  *  Y  W  Y  F  R  F  K  K  C  G  Y  R  N  G  T  C  S  L  R  *  C  H  V  C  F  L  S  F  F  F  E  L  R  P  S  P  S  S  S  I  F  P  C  Y  G  H  C  N  V  L  N  I  Q  S  C  I  F  L  I  F  N  C  L  P  I  L  Y  C  T  *  K   </second_frame>
            <third_frame>   F  Q  H  T  I  F  L  S  S  H  L  S  L  F  F  S  L  S  K  N  P  N  F  N  F  F  C  K  M  T  R  S   : V  *  K  C  V  D  V  G  K  R  W  K  L  M  Y  V  I  L  I  T  W  M  P  M  C  F  C  L  H  V  S  G  F  L  L  D  *  R  S  R  I  L  M  F  T  H  L  P  H  P  H  Q  L  L  I  V  P  R  V  I  L  I  S  V  L  I  I  Y  *  S  L  I  L  E  T  L  I  D  L  M  R  R  L  L  R  P  Q  D  W  Q  L  *  K  L  *  R  L  Q  K  L  Q  E  P  L  Q  K  R  R  L  R  K  Q  Q  R  L  W  L  L  L  R  A  L  *  N  W  L  P  L  S  L  M  R  E  P  V  G  T  N  I  *  R  G  I  R  *  K  N  M  F  L  F  R  R  C  I  I  R  I  R  G  L  M  I  V  E  Q  M  K  S  *  L  G  R  C  I  G  P  L  I  A  L  Q  E  F  *  R  T  Q  H  L  T  Q  E  I  K  N  I  R  G  *  R  G  L  L  L  L  K  N  L  S  F  R  L  E  V  H  P  W  K  E  T  V  L  P  R  A  M  G  M  V  L  L   : E  N  Q  L  S  Q  R  R  K  L  G  I  L  *  M  I  V  A  A  L  R  K  R  K  E  G  L  S  R  K  S  Y  H  S  A  F  A  A  S  G  I  K  Q  A  L  K  R  I  *  N  P  R  V  H  H  H  S  M  R  T  S  T  K  V  L  Q  V  I  I  P  F  F  R  L  R  G  Q  C  G  S  V  K  H  S  R  H  P  H  V  L  N  K  I  R  *  C  S  H  S  I  G  I  F  V  S  R  S  A  A  T  V  M  G  L  V  V  *  G  S  V  M  Y  V  F  F  P  S  F  S  S  *  G  L  L  R  P  V  P  F  F  L  V  M  G  I  V  M  F  *  T  Y  N  R  V  Y  F  *  Y  L  I  A  Y  L  F  C  I  A  H  E  R  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0291P19.2" strand="-"/>
                <serials PGL_serial="3" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="28311" stop="28298"/>
                    <exon start="27823" stop="27128"/>
                    <exon start="26974" stop="26680"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1002</number_coding_nucleotides>
                  <number_encoded_amino_acids>334</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NDKISLKVCRCRKKMEANVCDINHLDADVLLPPRKRLLAGLKKQNSDVYSSTPSPPTVNSPPCDFDIRLNNLLKSHFGDSNRSNEEIAEASRLAALEAVKAAKAARAIAEEKAAKAAKAVAAAKSALELVATLSDEGTSRDKHLKRNKMKKHVPVQTLYNKNKGTDDCRTDEELARTLHRAINSSPRILKNSTSDSRNQKHKRLKRSSPSEKSKLQTGSTSVEGNCPSTSNGNGFTRESIISKEKVGDSVNDSCSIEKKKGRLKQKKLPLSICSFRDQASPKEDLKSKSSSSFDENINKGTTSNNPIFPLERPMWKCQTFKAPTCVEQNKVMQS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="+" PGL_start="30226" PGL_stop="30870"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="30226" e_stop="30870"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.997">
            <gDNA_exon_boundary e_start="30226" e_stop="30870" e_length="645"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30226" stop="30845"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E542821" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30227" stop="30870"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E301808" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GATAGCCGATCAAAACCTAAACCCCAAATCAATTTCCCCGCCGATCATGCACTGCTCTTCCCATTACCGAATTCTTGTAAATTCTTATTTAAGGAAAAAAAAAAGGAAGAGATTGTTGTCTTTTTGAATATTCAAGAATGTTTTCTTTTTCAAAAGAAAATTAGGTTCTTATTTTCGTGGTGTGTGTTAAGGATGTTGAAGAAATTAGTTTTAACTTTTCAGGTCAGTAATGCAGTTCGCACAGGGGATTTGAGTTTTGTTTCAGAAAAACTGTATCTGCAGACAAGATGGTGAAGAGAAACTGAAATTTACTGTTTGATTCCAGGAAACCCTAAATTGATTAATTTTCTCGTTGATGTCAAATTGGTATTCTTCCATGCACTGGTTTTAAAGAAAATATTCAAGAAACTGTTGTCTAAGTTACATTGGTATTCATAGGAAATTGTTGTTTTCAAGAATATATTGGTATAGAACTTCAAGAAATCTTTTCTTTTTTAAGAAAATCAAAGAATTATGTTGTCAAAAAAGCATGTTTACAGAACGACAAATGTTTGTAACTTGGAATTTATGACTGTTGACAAGAACTGCTGTTTGCTAACAAGGACTGCTGTTTGCTAACAAGGATTTGTTGGGATTTTTCTTTTT</gDNA_template>
            <first_frame> D  S  R  S  K  P  K  P  Q  I  N  F  P  A  D  H  A  L  L  F  P  L  P  N  S  C  K  F  L  F  K  E  K  K  K  E  E  I  V  V  F  L  N  I  Q  E  C  F  L  F  Q  K  K  I  R  F  L  F  S  W  C  V  L  R  M  L  K  K  L  V  L  T  F  Q  V  S  N  A  V  R  T  G  D  L  S  F  V  S  E  K  L  Y  L  Q  T  R  W  *  R  E  T  E  I  Y  C  L  I  P  G  N  P  K  L  I  N  F  L  V  D  V  K  L  V  F  F  H  A  L  V  L  K  K  I  F  K  K  L  L  S  K  L  H  W  Y  S  *  E  I  V  V  F  K  N  I  L  V  *  N  F  K  K  S  F  L  F  *  E  N  Q  R  I  M  L  S  K  K  H  V  Y  R  T  T  N  V  C  N  L  E  F  M  T  V  D  K  N  C  C  L  L  T  R  T  A  V  C  *  Q  G  F  V  G  I  F  L  F </first_frame>
            <second_frame>  I  A  D  Q  N  L  N  P  K  S  I  S  P  P  I  M  H  C  S  S  H  Y  R  I  L  V  N  S  Y  L  R  K  K  K  R  K  R  L  L  S  F  *  I  F  K  N  V  F  F  F  K  R  K  L  G  S  Y  F  R  G  V  C  *  G  C  *  R  N  *  F  *  L  F  R  S  V  M  Q  F  A  Q  G  I  *  V  L  F  Q  K  N  C  I  C  R  Q  D  G  E  E  K  L  K  F  T  V  *  F  Q  E  T  L  N  *  L  I  F  S  L  M  S  N  W  Y  S  S  M  H  W  F  *  R  K  Y  S  R  N  C  C  L  S  Y  I  G  I  H  R  K  L  L  F  S  R  I  Y  W  Y  R  T  S  R  N  L  F  F  F  K  K  I  K  E  L  C  C  Q  K  S  M  F  T  E  R  Q  M  F  V  T  W  N  L  *  L  L  T  R  T  A  V  C  *  Q  G  L  L  F  A  N  K  D  L  L  G  F  F  F   </second_frame>
            <third_frame>   *  P  I  K  T  *  T  P  N  Q  F  P  R  R  S  C  T  A  L  P  I  T  E  F  L  *  I  L  I  *  G  K  K  K  G  R  D  C  C  L  F  E  Y  S  R  M  F  S  F  S  K  E  N  *  V  L  I  F  V  V  C  V  K  D  V  E  E  I  S  F  N  F  S  G  Q  *  C  S  S  H  R  G  F  E  F  C  F  R  K  T  V  S  A  D  K  M  V  K  R  N  *  N  L  L  F  D  S  R  K  P  *  I  D  *  F  S  R  *  C  Q  I  G  I  L  P  C  T  G  F  K  E  N  I  Q  E  T  V  V  *  V  T  L  V  F  I  G  N  C  C  F  Q  E  Y  I  G  I  E  L  Q  E  I  F  S  F  L  R  K  S  K  N  Y  V  V  K  K  A  C  L  Q  N  D  K  C  L  *  L  G  I  Y  D  C  *  Q  E  L  L  F  A  N  K  D  C  C  L  L  T  R  I  C  W  D  F  S  F  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0291P19.2" strand="+"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="30226" stop="30519"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>291</number_coding_nucleotides>
                  <number_encoded_amino_acids>97</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DSRSKPKPQINFPADHALLFPLPNSCKFLFKEKKKEEIVVFLNIQECFLFQKKIRFLFSWCVLRMLKKLVLTFQVSNAVRTGDLSFVSEKLYLQTRW*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="+" PGL_start="32038" PGL_stop="35024"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="32038" e_stop="32136"/>
            <exon e_start="32293" e_stop="32341"/>
            <exon e_start="33458" e_stop="33658"/>
            <exon e_start="33766" e_stop="33812"/>
            <exon e_start="34771" e_stop="35024"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.947" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.943" acc_prob="0.990" e_score="1.000"/>
          <exon-intron don_prob="0.984" acc_prob="0.992" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="32038" e_stop="32136" e_length="99"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.947">
            <gDNA_intron_boundary i_start="32137" i_stop="32292" i_length="156"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="32293" e_stop="32341" e_length="49"/>
          </exon>
          <intron i_serial="2" don_prob="0.997" acc_prob="0.000">
            <gDNA_intron_boundary i_start="32342" i_stop="33457" i_length="1116"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="33458" e_stop="33658" e_length="201"/>
          </exon>
          <intron i_serial="3" don_prob="0.943" acc_prob="0.990">
            <gDNA_intron_boundary i_start="33659" i_stop="33765" i_length="107"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="33766" e_stop="33812" e_length="47"/>
          </exon>
          <intron i_serial="4" don_prob="0.984" acc_prob="0.992">
            <gDNA_intron_boundary i_start="33813" i_stop="34770" i_length="958"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="34771" e_stop="35024" e_length="254"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32038" stop="32136"/>
              <exon start="32293" stop="32341"/>
              <exon start="33458" stop="33658"/>
              <exon start="33766" stop="33812"/>
              <exon start="34771" stop="35024"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E317731" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGAAATTGGCTACCAATTACTACACAACTGTACTGACCAAATTCAGAACTGGGTTTGGATCTGCAACATTCATTCACAGGCTTCAAGATCATTTACCAG : GAACTTAAATCTTATTCACAAGAAACCTACATTTGTCACACTTCTTGAG : GCAGCTAGTCTCTTTGCCTTGGTGGATAGTGCTGAGTTCAAATGATGCCATACAGCAGTCATTATGGAGCTTGCTTTGTTTCCTCAGGGCCCTCAAAAAAACACGGGCAACTACTTTATCATGGGAAAGAAGGAATCATTCCTTCAATGACAGTCAACTTCACTAGAACCATGGACCGGGAGTGAGGTCATTTCTGCTATT : GATCTGGTTCTCACGAGATGGACTGGTGCTGATGGGAGAAAGATATG : TGATGATGACCTACTTTGTGTACATGCTTCTCCTTCTCCGTTGTCGCTATTGCCCAGTGGTTTTCGGATTCATTTGAGTAACCTCAACAAATTAAATGCAAGTGATGGTTCATTCAAACTCTCAGGATACATCTCACTTCAGATTTGGAGGTTGGAAGCACAACTTTTGACCTATTAAATATGCCAACACTGTTGATCTTTGACATTATTCTAGAGACTCAAGGTTTAAGGATAGTTTTTCATGTATCCTTTGT</gDNA_template>
            <first_frame> *  N  W  L  P  I  T  T  Q  L  Y  *  P  N  S  E  L  G  L  D  L  Q  H  S  F  T  G  F  K  I  I  Y  Q  :  E  L  K  S  Y  S  Q  E  T  Y  I  C  H  T  S  *   : G  S  *  S  L  C  L  G  G  *  C  *  V  Q  M  M  P  Y  S  S  H  Y  G  A  C  F  V  S  S  G  P  S  K  K  H  G  Q  L  L  Y  H  G  K  E  G  I  I  P  S  M  T  V  N  F  T  R  T  M  D  R  E  *  G  H  F  C  Y   : *  S  G  S  H  E  M  D  W  C  *  W  E  K  D  M  :  *  *  *  P  T  L  C  T  C  F  S  F  S  V  V  A  I  A  Q  W  F  S  D  S  F  E  *  P  Q  Q  I  K  C  K  *  W  F  I  Q  T  L  R  I  H  L  T  S  D  L  E  V  G  S  T  T  F  D  L  L  N  M  P  T  L  L  I  F  D  I  I  L  E  T  Q  G  L  R  I  V  F  H  V  S  F   </first_frame>
            <second_frame>  E  I  G  Y  Q  L  L  H  N  C  T  D  Q  I  Q  N  W  V  W  I  C  N  I  H  S  Q  A  S  R  S  F  T  R :   N  L  N  L  I  H  K  K  P  T  F  V  T  L  L  E  :  A  A  S  L  F  A  L  V  D  S  A  E  F  K  *  C  H  T  A  V  I  M  E  L  A  L  F  P  Q  G  P  Q  K  N  T  G  N  Y  F  I  M  G  K  K  E  S  F  L  Q  *  Q  S  T  S  L  E  P  W  T  G  S  E  V  I  S  A  I  :  D  L  V  L  T  R  W  T  G  A  D  G  R  K  I  C :   D  D  D  L  L  C  V  H  A  S  P  S  P  L  S  L  L  P  S  G  F  R  I  H  L  S  N  L  N  K  L  N  A  S  D  G  S  F  K  L  S  G  Y  I  S  L  Q  I  W  R  L  E  A  Q  L  L  T  Y  *  I  C  Q  H  C  *  S  L  T  L  F  *  R  L  K  V  *  G  *  F  F  M  Y  P  L  </second_frame>
            <third_frame>   K  L  A  T  N  Y  Y  T  T  V  L  T  K  F  R  T  G  F  G  S  A  T  F  I  H  R  L  Q  D  H  L  P   : G  T  *  I  L  F  T  R  N  L  H  L  S  H  F  L  R :   Q  L  V  S  L  P  W  W  I  V  L  S  S  N  D  A  I  Q  Q  S  L  W  S  L  L  C  F  L  R  A  L  K  K  T  R  A  T  T  L  S  W  E  R  R  N  H  S  F  N  D  S  Q  L  H  *  N  H  G  P  G  V  R  S  F  L  L  L :   I  W  F  S  R  D  G  L  V  L  M  G  E  R  Y   : V  M  M  T  Y  F  V  Y  M  L  L  L  L  R  C  R  Y  C  P  V  V  F  G  F  I  *  V  T  S  T  N  *  M  Q  V  M  V  H  S  N  S  Q  D  T  S  H  F  R  F  G  G  W  K  H  N  F  *  P  I  K  Y  A  N  T  V  D  L  *  H  Y  S  R  D  S  R  F  K  D  S  F  S  C  I  L  C </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0291P19.2" strand="+"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="33608" stop="33658"/>
                    <exon start="33766" stop="33812"/>
                    <exon start="34771" stop="34948"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>273</number_coding_nucleotides>
                  <number_encoded_amino_acids>91</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QSTSLEPWTGSEVISAIDLVLTRWTGADGRKICDDDLLCVHASPSPLSLLPSGFRIHLSNLNKLNASDGSFKLSGYISLQIWRLEAQLLTY*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0291P19.2" strand="+"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="32301" stop="32341"/>
                    <exon start="33458" stop="33623"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>204</number_coding_nucleotides>
                  <number_encoded_amino_acids>68</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ILFTRNLHLSHFLRQLVSLPWWIVLSSNDAIQQSLWSLLCFLRALKKTRATTLSWERRNHSFNDSQLH*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="+" PGL_start="35829" PGL_stop="36491"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="35829" e_stop="36491"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="35829" e_stop="36491" e_length="663"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="35829" stop="36491"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E206288" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTTGCATAGTCCATTATGCCTGTTCTTGGTTTCTCGTAAATTTCCTTATAATGCGTTTACTTTAAATAATTGTTTTATCTTTAGGGATTGTTTTTTGTTGGACTCAGTAGCAAACATAAAAACTCAGCATAAACTTCCACATAAATAGTATAATATTTGTTGGCTGCGTAAGTCATAGTAATAACTGCATAACTATGTATCATTCAGTTATACGCATAAGAAAATATAAGCTCGACAGGACATATGCAGCGTCTGGTTGGTGGTATTAACTTTCATTATTAATATCCTTGTGACTTATGTGAGAATCTATATGTTATTTACGTGGGATGGAATATGGAATAAGAAAACACATGCCAACAATGCACGGATGAGTATTTACAGGCAAAAATTCCCTTTATAGTAGATAATCCCCGCATAGCATATCTTATTTACTATTCACTGCGCTAAAATCCCTTCATCATCAGTTACTGCATAACAATTTTTACATTATTATCACTGCATAAACATTCCCTCTATGATTCTTACTTAACCAAATAATTTCTTAACTCTTTTGTATTGCTGTTTTGTGATATTACTGAAGAAAAGGATTATGATCTTTTGTTTGATTCTACCATTTATCTTCGCTGAGCATTACACCCATTATCATGTTCTACAGCATGATGC</gDNA_template>
            <first_frame> F  A  *  S  I  M  P  V  L  G  F  S  *  I  S  L  *  C  V  Y  F  K  *  L  F  Y  L  *  G  L  F  F  V  G  L  S  S  K  H  K  N  S  A  *  T  S  T  *  I  V  *  Y  L  L  A  A  *  V  I  V  I  T  A  *  L  C  I  I  Q  L  Y  A  *  E  N  I  S  S  T  G  H  M  Q  R  L  V  G  G  I  N  F  H  Y  *  Y  P  C  D  L  C  E  N  L  Y  V  I  Y  V  G  W  N  M  E  *  E  N  T  C  Q  Q  C  T  D  E  Y  L  Q  A  K  I  P  F  I  V  D  N  P  R  I  A  Y  L  I  Y  Y  S  L  R  *  N  P  F  I  I  S  Y  C  I  T  I  F  T  L  L  S  L  H  K  H  S  L  Y  D  S  Y  L  T  K  *  F  L  N  S  F  V  L  L  F  C  D  I  T  E  E  K  D  Y  D  L  L  F  D  S  T  I  Y  L  R  *  A  L  H  P  L  S  C  S  T  A  *  C </first_frame>
            <second_frame>  L  H  S  P  L  C  L  F  L  V  S  R  K  F  P  Y  N  A  F  T  L  N  N  C  F  I  F  R  D  C  F  L  L  D  S  V  A  N  I  K  T  Q  H  K  L  P  H  K  *  Y  N  I  C  W  L  R  K  S  *  *  *  L  H  N  Y  V  S  F  S  Y  T  H  K  K  I  *  A  R  Q  D  I  C  S  V  W  L  V  V  L  T  F  I  I  N  I  L  V  T  Y  V  R  I  Y  M  L  F  T  W  D  G  I  W  N  K  K  T  H  A  N  N  A  R  M  S  I  Y  R  Q  K  F  P  L  *  *  I  I  P  A  *  H  I  L  F  T  I  H  C  A  K  I  P  S  S  S  V  T  A  *  Q  F  L  H  Y  Y  H  C  I  N  I  P  S  M  I  L  T  *  P  N  N  F  L  T  L  L  Y  C  C  F  V  I  L  L  K  K  R  I  M  I  F  C  L  I  L  P  F  I  F  A  E  H  Y  T  H  Y  H  V  L  Q  H  D   </second_frame>
            <third_frame>   C  I  V  H  Y  A  C  S  W  F  L  V  N  F  L  I  M  R  L  L  *  I  I  V  L  S  L  G  I  V  F  C  W  T  Q  *  Q  T  *  K  L  S  I  N  F  H  I  N  S  I  I  F  V  G  C  V  S  H  S  N  N  C  I  T  M  Y  H  S  V  I  R  I  R  K  Y  K  L  D  R  T  Y  A  A  S  G  W  W  Y  *  L  S  L  L  I  S  L  *  L  M  *  E  S  I  C  Y  L  R  G  M  E  Y  G  I  R  K  H  M  P  T  M  H  G  *  V  F  T  G  K  N  S  L  Y  S  R  *  S  P  H  S  I  S  Y  L  L  F  T  A  L  K  S  L  H  H  Q  L  L  H  N  N  F  Y  I  I  I  T  A  *  T  F  P  L  *  F  L  L  N  Q  I  I  S  *  L  F  C  I  A  V  L  *  Y  Y  *  R  K  G  L  *  S  F  V  *  F  Y  H  L  S  S  L  S  I  T  P  I  I  M  F  Y  S  M  M  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0291P19.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="+" PGL_start="36629" PGL_stop="37790"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="36629" e_stop="36640"/>
            <exon e_start="36748" e_stop="36855"/>
            <exon e_start="36958" e_stop="37066"/>
            <exon e_start="37255" e_stop="37343"/>
            <exon e_start="37507" e_stop="37790"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.934" acc_prob="0.298" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.973" e_score="1.000"/>
          <exon-intron don_prob="0.954" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.998" e_score="1.000"/>
          <exon-only e_score="0.982"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="36629" e_stop="36640" e_length="12"/>
          </exon>
          <intron i_serial="1" don_prob="0.934" acc_prob="0.298">
            <gDNA_intron_boundary i_start="36641" i_stop="36747" i_length="107"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="36748" e_stop="36855" e_length="108"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="0.973">
            <gDNA_intron_boundary i_start="36856" i_stop="36957" i_length="102"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="36958" e_stop="37066" e_length="109"/>
          </exon>
          <intron i_serial="3" don_prob="0.954" acc_prob="0.000">
            <gDNA_intron_boundary i_start="37067" i_stop="37254" i_length="188"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="37255" e_stop="37343" e_length="89"/>
          </exon>
          <intron i_serial="4" don_prob="1.000" acc_prob="0.998">
            <gDNA_intron_boundary i_start="37344" i_stop="37506" i_length="163"/>
          </intron>
          <exon e_serial="5" e_score="0.982">
            <gDNA_exon_boundary e_start="37507" e_stop="37790" e_length="284"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36629" stop="36640"/>
              <exon start="36748" stop="36855"/>
              <exon start="36958" stop="37066"/>
              <exon start="37255" stop="37343"/>
              <exon start="37507" stop="37790"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E542820" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TAGCAAGAAATG : GTCATACCTGAAACTAATTACCAATTACTACACAACTATGCTGACCAAATTTTAAAACTGGGGTTGGATCTGCAACATTCATTCTCAAGCCTCAAGATCATTTACTAG : CATTCATTGAAGTTGAACCTAACTCTAGCATGAACTGAAAAGTAACGGTGACAGCCAATTCAAAAGTAAACACACTACTAGCTAAACAAATTGAGGCTGTGACACTGAG : GTAATTTTTTTGCTTTCTGCTTGTGGGTTTAAACCTTGATGCTCTCTCGCCTCCACCAACCCCCACATAAGCAAAAGAGAAGGAACAAG : GTGCATATGTTTGGAGATGCATTGTCGCCTTCAGAGTGTAGCAATAATTCATCACATTGAAATATAATTTGGATCTAGAGCACAATACATCTAATACAGATTCGACAAATAAATGTACTTTACCCGATTACAGATCCAATCGTACCATTTCTGTAAGTTTATCTATTTATACCTACTTAGAGATACGATTAATATTGTCAAACTCAAAATATACACTCCATGGGAAGCACTAAACACTATAGGTAAATCGATATTGAATTTACATTTTATTGACAAAAAGTTGT</gDNA_template>
            <first_frame> *  Q  E  M  :  V  I  P  E  T  N  Y  Q  L  L  H  N  Y  A  D  Q  I  L  K  L  G  L  D  L  Q  H  S  F  S  S  L  K  I  I  Y  *  :  H  S  L  K  L  N  L  T  L  A  *  T  E  K  *  R  *  Q  P  I  Q  K  *  T  H  Y  *  L  N  K  L  R  L  *  H  *   : G  N  F  F  A  F  C  L  W  V  *  T  L  M  L  S  R  L  H  Q  P  P  H  K  Q  K  R  R  N  K  :  V  H  M  F  G  D  A  L  S  P  S  E  C  S  N  N  S  S  H  *  N  I  I  W  I  *  S  T  I  H  L  I  Q  I  R  Q  I  N  V  L  Y  P  I  T  D  P  I  V  P  F  L  *  V  Y  L  F  I  P  T  *  R  Y  D  *  Y  C  Q  T  Q  N  I  H  S  M  G  S  T  K  H  Y  R  *  I  D  I  E  F  T  F  Y  *  Q  K  V   </first_frame>
            <second_frame>  S  K  K  W :   S  Y  L  K  L  I  T  N  Y  Y  T  T  M  L  T  K  F  *  N  W  G  W  I  C  N  I  H  S  Q  A  S  R  S  F  T  S :   I  H  *  S  *  T  *  L  *  H  E  L  K  S  N  G  D  S  Q  F  K  S  K  H  T  T  S  *  T  N  *  G  C  D  T  E  :  V  I  F  L  L  S  A  C  G  F  K  P  *  C  S  L  A  S  T  N  P  H  I  S  K  R  E  G  T  R :   C  I  C  L  E  M  H  C  R  L  Q  S  V  A  I  I  H  H  I  E  I  *  F  G  S  R  A  Q  Y  I  *  Y  R  F  D  K  *  M  Y  F  T  R  L  Q  I  Q  S  Y  H  F  C  K  F  I  Y  L  Y  L  L  R  D  T  I  N  I  V  K  L  K  I  Y  T  P  W  E  A  L  N  T  I  G  K  S  I  L  N  L  H  F  I  D  K  K  L  </second_frame>
            <third_frame>   A  R  N   : G  H  T  *  N  *  L  P  I  T  T  Q  L  C  *  P  N  F  K  T  G  V  G  S  A  T  F  I  L  K  P  Q  D  H  L  L   : A  F  I  E  V  E  P  N  S  S  M  N  *  K  V  T  V  T  A  N  S  K  V  N  T  L  L  A  K  Q  I  E  A  V  T  L  R :   *  F  F  C  F  L  L  V  G  L  N  L  D  A  L  S  P  P  P  T  P  T  *  A  K  E  K  E  Q   : G  A  Y  V  W  R  C  I  V  A  F  R  V  *  Q  *  F  I  T  L  K  Y  N  L  D  L  E  H  N  T  S  N  T  D  S  T  N  K  C  T  L  P  D  Y  R  S  N  R  T  I  S  V  S  L  S  I  Y  T  Y  L  E  I  R  L  I  L  S  N  S  K  Y  T  L  H  G  K  H  *  T  L  *  V  N  R  Y  *  I  Y  I  L  L  T  K  S  C </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0291P19.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="-" PGL_start="41231" PGL_stop="39950"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="41231" e_stop="40892"/>
            <exon e_start="40151" e_stop="39950"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.992" acc_prob="0.996" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="41231" e_stop="40892" e_length="340"/>
          </exon>
          <intron i_serial="1" don_prob="0.992" acc_prob="0.996">
            <gDNA_intron_boundary i_start="40891" i_stop="40152" i_length="740"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="40151" e_stop="39950" e_length="202"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="41231" stop="40892"/>
              <exon start="40151" stop="39950"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E206966" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="41222" stop="40892"/>
              <exon start="40151" stop="39954"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E282482" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCCCTCATTAAACGCACCGTCTCCTTCTCTATCAAACTTTTCTTTTCCCCCAAAAAATTATAGAGCTCTGTAATTTTTGTTTTGATATTTTCTCACAAAATTCGAAAACGTAGTTTTGGAATTTTCAGATCACGATTGTTTGATTCAGTGATTAACAATGTCTTGTTCATCGTCGTCGGCGTCTGAGGATGAAGATGAAGGATTCGATTCTTACCGGAAGGGAGGCTACCATGCCGTGAGAGTCGGCGATTCATTTTCCGGTGGCCGATATATGGCGCAACGAAAACTCGGCTGGGGAGAGTTTTCCACCGTTTGGCTCGCTTATGATACTCAATTATCC : GGTTTTGTTGCCTTGAAGATCCAGAAAAGTGCACCACAATTTGCTCAAGCAGCTTTTCATGAAATTGAAATCCTTTCTGCGATTGCCAATGGTGATCAATCTAACAGTAAATACGTTGTACGGCTTATTGACCATTTTAAGCACACAGGTCCTAATGGACAGCACATATGCATGGTTTTTGAATTTCTTGGTGATAGCTTAT</gDNA_template>
            <first_frame> S  L  I  K  R  T  V  S  F  S  I  K  L  F  F  S  P  K  K  L  *  S  S  V  I  F  V  L  I  F  S  H  K  I  R  K  R  S  F  G  I  F  R  S  R  L  F  D  S  V  I  N  N  V  L  F  I  V  V  G  V  *  G  *  R  *  R  I  R  F  L  P  E  G  R  L  P  C  R  E  S  R  R  F  I  F  R  W  P  I  Y  G  A  T  K  T  R  L  G  R  V  F  H  R  L  A  R  L  *  Y  S  I  I   : R  F  C  C  L  E  D  P  E  K  C  T  T  I  C  S  S  S  F  S  *  N  *  N  P  F  C  D  C  Q  W  *  S  I  *  Q  *  I  R  C  T  A  Y  *  P  F  *  A  H  R  S  *  W  T  A  H  M  H  G  F  *  I  S  W  *  *  L   </first_frame>
            <second_frame>  P  S  L  N  A  P  S  P  S  L  S  N  F  S  F  P  P  K  N  Y  R  A  L  *  F  L  F  *  Y  F  L  T  K  F  E  N  V  V  L  E  F  S  D  H  D  C  L  I  Q  *  L  T  M  S  C  S  S  S  S  A  S  E  D  E  D  E  G  F  D  S  Y  R  K  G  G  Y  H  A  V  R  V  G  D  S  F  S  G  G  R  Y  M  A  Q  R  K  L  G  W  G  E  F  S  T  V  W  L  A  Y  D  T  Q  L  S  :  G  F  V  A  L  K  I  Q  K  S  A  P  Q  F  A  Q  A  A  F  H  E  I  E  I  L  S  A  I  A  N  G  D  Q  S  N  S  K  Y  V  V  R  L  I  D  H  F  K  H  T  G  P  N  G  Q  H  I  C  M  V  F  E  F  L  G  D  S  L  </second_frame>
            <third_frame>   P  H  *  T  H  R  L  L  L  Y  Q  T  F  L  F  P  Q  K  I  I  E  L  C  N  F  C  F  D  I  F  S  Q  N  S  K  T  *  F  W  N  F  Q  I  T  I  V  *  F  S  D  *  Q  C  L  V  H  R  R  R  R  L  R  M  K  M  K  D  S  I  L  T  G  R  E  A  T  M  P  *  E  S  A  I  H  F  P  V  A  D  I  W  R  N  E  N  S  A  G  E  S  F  P  P  F  G  S  L  M  I  L  N  Y  P :   V  L  L  P  *  R  S  R  K  V  H  H  N  L  L  K  Q  L  F  M  K  L  K  S  F  L  R  L  P  M  V  I  N  L  T  V  N  T  L  Y  G  L  L  T  I  L  S  T  Q  V  L  M  D  S  T  Y  A  W  F  L  N  F  L  V  I  A  Y </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0291P19.2" strand="-"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="41080" stop="40892"/>
                    <exon start="40151" stop="39951"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>390</number_coding_nucleotides>
                  <number_encoded_amino_acids>130</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LTMSCSSSSASEDEDEGFDSYRKGGYHAVRVGDSFSGGRYMAQRKLGWGEFSTVWLAYDTQLSGFVALKIQKSAPQFAQAAFHEIEILSAIANGDQSNSKYVVRLIDHFKHTGPNGQHICMVFEFLGDSL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="-" PGL_start="49401" PGL_stop="48959"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="49401" e_stop="48959"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.914"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.914">
            <gDNA_exon_boundary e_start="49401" e_stop="48959" e_length="443"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49401" stop="49077"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E393076" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49401" stop="49108"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E393075" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49400" stop="48959"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E200845" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TAAAATGTATGTATATCGCATAATTATAAATGTATAGCAGGAAGATATATGTTTTTCTCTCGCTTTATACAAAACACAGAAACACAATATATACACTTCTGTTATATAAAACTAGAGAAAATTATATTTCACTGCAATTGTATAATTCGCAATTGTATAATTCGTTGGCTTTTTTCTCTGCAATATTTGAAGTAAAATGTTTGTAAATTGTATAATTAAGTGTATAACACGAAGATATATATTTTTGCATGTGTATATACAATTTTCTCTCGCTTTATACAAAACAAAAACAGAATTATACACTTCTGTGTATAAATCAAGAGAGGCGAGCGAGAATGGAGAGTGGCGAGCGAGATTTCTGGGAGAGAGACTTTGGCAATTTTTAGCTAACATTTGCTATGGAGCACAATTAAATCAAACTCTAGCTATTCCATTTATTTTAG</gDNA_template>
            <first_frame> *  N  V  C  I  S  H  N  Y  K  C  I  A  G  R  Y  M  F  F  S  R  F  I  Q  N  T  E  T  Q  Y  I  H  F  C  Y  I  K  L  E  K  I  I  F  H  C  N  C  I  I  R  N  C  I  I  R  W  L  F  S  L  Q  Y  L  K  *  N  V  C  K  L  Y  N  *  V  Y  N  T  K  I  Y  I  F  A  C  V  Y  T  I  F  S  R  F  I  Q  N  K  N  R  I  I  H  F  C  V  *  I  K  R  G  E  R  E  W  R  V  A  S  E  I  S  G  R  E  T  L  A  I  F  S  *  H  L  L  W  S  T  I  K  S  N  S  S  Y  S  I  Y  F   </first_frame>
            <second_frame>  K  M  Y  V  Y  R  I  I  I  N  V  *  Q  E  D  I  C  F  S  L  A  L  Y  K  T  Q  K  H  N  I  Y  T  S  V  I  *  N  *  R  K  L  Y  F  T  A  I  V  *  F  A  I  V  *  F  V  G  F  F  L  C  N  I  *  S  K  M  F  V  N  C  I  I  K  C  I  T  R  R  Y  I  F  L  H  V  Y  I  Q  F  S  L  A  L  Y  K  T  K  T  E  L  Y  T  S  V  Y  K  S  R  E  A  S  E  N  G  E  W  R  A  R  F  L  G  E  R  L  W  Q  F  L  A  N  I  C  Y  G  A  Q  L  N  Q  T  L  A  I  P  F  I  L  </second_frame>
            <third_frame>   K  C  M  Y  I  A  *  L  *  M  Y  S  R  K  I  Y  V  F  L  S  L  Y  T  K  H  R  N  T  I  Y  T  L  L  L  Y  K  T  R  E  N  Y  I  S  L  Q  L  Y  N  S  Q  L  Y  N  S  L  A  F  F  S  A  I  F  E  V  K  C  L  *  I  V  *  L  S  V  *  H  E  D  I  Y  F  C  M  C  I  Y  N  F  L  S  L  Y  T  K  Q  K  Q  N  Y  T  L  L  C  I  N  Q  E  R  R  A  R  M  E  S  G  E  R  D  F  W  E  R  D  F  G  N  F  *  L  T  F  A  M  E  H  N  *  I  K  L  *  L  F  H  L  F  * </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0291P19.2" strand="-"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="49211" stop="48960"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>252</number_coding_nucleotides>
                  <number_encoded_amino_acids>84</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SKMFVNCIIKCITRRYIFLHVYIQFSLALYKTKTELYTSVYKSREASENGEWRARFLGERLWQFLANICYGAQLNQTLAIPFIL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="+" PGL_start="49881" PGL_stop="61891"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="49906" e_stop="50149"/>
            <exon e_start="54143" e_stop="54152"/>
            <exon e_start="60148" e_stop="60189"/>
            <exon e_start="60362" e_stop="60482"/>
            <exon e_start="60683" e_stop="61891"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.849" e_score="1.000"/>
          <exon-intron don_prob="0.779" acc_prob="0.969" e_score="0.700"/>
          <exon-intron don_prob="0.999" acc_prob="0.973" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="0.944"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="49906" e_stop="50149" e_length="244"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.849">
            <gDNA_intron_boundary i_start="50150" i_stop="54142" i_length="3993"/>
          </intron>
          <exon e_serial="2" e_score="0.700">
            <gDNA_exon_boundary e_start="54143" e_stop="54152" e_length="10"/>
          </exon>
          <intron i_serial="2" don_prob="0.779" acc_prob="0.969">
            <gDNA_intron_boundary i_start="54153" i_stop="60147" i_length="5995"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="60148" e_stop="60189" e_length="42"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="0.973">
            <gDNA_intron_boundary i_start="60190" i_stop="60361" i_length="172"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="60362" e_stop="60482" e_length="121"/>
          </exon>
          <intron i_serial="4" don_prob="1.000" acc_prob="1.000">
            <gDNA_intron_boundary i_start="60483" i_stop="60682" i_length="200"/>
          </intron>
          <exon e_serial="5" e_score="0.944">
            <gDNA_exon_boundary e_start="60683" e_stop="61891" e_length="1209"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49906" stop="50149"/>
              <exon start="54143" stop="54152"/>
              <exon start="60148" stop="60189"/>
              <exon start="60362" stop="60482"/>
              <exon start="60683" stop="60880"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E300265" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60160" stop="60189"/>
              <exon start="60362" stop="60482"/>
              <exon start="60683" stop="61015"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E337664" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60437" stop="60482"/>
              <exon start="60683" stop="61403"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E357704" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60437" stop="60482"/>
              <exon start="60683" stop="61398"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E349857" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60437" stop="60482"/>
              <exon start="60683" stop="61261"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E357787" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60744" stop="61548"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E585478" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60744" stop="61167"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E255129" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60826" stop="61523"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E409387" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60871" stop="61523"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E420146" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60871" stop="61446"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E405746" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60978" stop="61557"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E614099" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61080" stop="61594"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E609880" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61081" stop="61582"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E288696" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61191" stop="61441"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E581928" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61319" stop="61876"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E365630" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61324" stop="61891"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E326674" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61324" stop="61891"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E327096" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61522" stop="61874"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E221033" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CGAAGCACAAACCCCATCAAACTTCTGACATCACTTTTCTCGATCCCCCGCCTATCGATACCACCACTGTCCACTGTCCGGCGGCGGCGGCGGCGGCGGATCACCACCTGGGATCTTCTTAAACCTCTCTAATTCTCTGCCCTATTCCTTATCACAGATCTAATTCAGTATTCTCAAACTGATTGAATCGACTCAGTAATGGCTGCGCAGAACCAAACGGATCAATTTGAGGCTTATTTTCGCA : GCATCTAAAG : GAAGGAGACTAGTTTTGATGGTTCACCCAATGCTGCCCAAAG : TGAACACTGGGGTACTGAATCTGTGTTCTCGAGGGATAAAGGTTTTGATGGATCTGGCTGGGGTACATTTGATACCAACTTTGACACTGATGCTGCATGGGACGTCAATTCTGTTGCAAAG : GATTCAGATCATGACAATCTCAAGGAATCTTCTCTTTTTGGAGATGATGATTGGGGCTTAGCCCCTATTAAAACGGGGTCCAAACAGTCCAACACACTACCGAATCAAATGCCATCCTTTGATTCTGTTCCTAGCACGCCAAGTTACAATGCTGGGATAGACAACACGTTCCCCAAACAAAGCCCTTTCTTTGATTCTGTTCCTAGCACTCCAAGTTACAATGCTGGGTTCAGTTATTCAGACAACACATTCCCGAAGCAAAGCCCTTTCTTTGATTCTGTTCCAAGTACCCCAAGTTACAACTCTGGATTCACTCAGACTGATAACTTGTTCTCGAGGCAAAGTCCCTTCTTTGATTCTGTTCCTAGCACACCAGCTTATAATTCAGGAGGCTCCCCGAATGCAGATAATATGTTCCAGAATAAGAGTCCGTTTGCCTTTGGGGACTCGGTTCCCAGCACACCTATGTACAGTTCTACAAACTCGCCTCGCAGACATAGTGGAAAGATTTGAAGAAACTCGAACAGCTTCTCCAGATTTGATCCCTTTAACATGAATGATAGTGGCCCCTTTGGCACCCGTGACTCTCTTTCAAGATTTGATTCAATGCGCAGCACCAGAGACTCTGACTACGATCATGGTTCATTCCAGCAACGGGACTCATTTGCTAGGTTTGATTCATTTCGCAGCACCGCAGACTCTGACTATAATTTTGGGCTCTTTCCTCCTCGCGAATCACTAAGTAGGTTTGATTCCATGAGTAGTACCAGGGACACAGATCATCGTCATGGTTTCACATCTTTTGATGATGCGGATCCGTTCGGTTCAAATGACCCATTTAAGACGTCGGCCGAGAGTCAGACACCAAGGAGAGATTCTGATAGTTGGAAAGCGTTTTGACGGGATGATGGAGTACTAGTGCTAAGTCATTTTATTCTATTTCATTTTTATCATTTGGCCAGTTTGTTGTTTGTAGGTATGTAATGTTGTGACTAGATAAAACATGTGTGCGGCATGCGTTGCTATCAAGATATAAGCTGTGTTGTACTATTATTTGTTAGCTTGATTTTATTTTTTTAAAAAAATATTCCATGTGAATTTTGACCTTTTCCACCACATTATTTTTTCGGAACTTCAAGGTGGACACAACTTTTGCTGGTCACCCATATTGAATGTATAAAGTGTATAATGAGCATTTTTTATCAGTTG</gDNA_template>
            <first_frame> R  S  T  N  P  I  K  L  L  T  S  L  F  S  I  P  R  L  S  I  P  P  L  S  T  V  R  R  R  R  R  R  R  I  T  T  W  D  L  L  K  P  L  *  F  S  A  L  F  L  I  T  D  L  I  Q  Y  S  Q  T  D  *  I  D  S  V  M  A  A  Q  N  Q  T  D  Q  F  E  A  Y  F  R   : S  I  *  R :   K  E  T  S  F  D  G  S  P  N  A  A  Q  S :   E  H  W  G  T  E  S  V  F  S  R  D  K  G  F  D  G  S  G  W  G  T  F  D  T  N  F  D  T  D  A  A  W  D  V  N  S  V  A  K  :  D  S  D  H  D  N  L  K  E  S  S  L  F  G  D  D  D  W  G  L  A  P  I  K  T  G  S  K  Q  S  N  T  L  P  N  Q  M  P  S  F  D  S  V  P  S  T  P  S  Y  N  A  G  I  D  N  T  F  P  K  Q  S  P  F  F  D  S  V  P  S  T  P  S  Y  N  A  G  F  S  Y  S  D  N  T  F  P  K  Q  S  P  F  F  D  S  V  P  S  T  P  S  Y  N  S  G  F  T  Q  T  D  N  L  F  S  R  Q  S  P  F  F  D  S  V  P  S  T  P  A  Y  N  S  G  G  S  P  N  A  D  N  M  F  Q  N  K  S  P  F  A  F  G  D  S  V  P  S  T  P  M  Y  S  S  T  N  S  P  R  R  H  S  G  K  I  *  R  N  S  N  S  F  S  R  F  D  P  F  N  M  N  D  S  G  P  F  G  T  R  D  S  L  S  R  F  D  S  M  R  S  T  R  D  S  D  Y  D  H  G  S  F  Q  Q  R  D  S  F  A  R  F  D  S  F  R  S  T  A  D  S  D  Y  N  F  G  L  F  P  P  R  E  S  L  S  R  F  D  S  M  S  S  T  R  D  T  D  H  R  H  G  F  T  S  F  D  D  A  D  P  F  G  S  N  D  P  F  K  T  S  A  E  S  Q  T  P  R  R  D  S  D  S  W  K  A  F  *  R  D  D  G  V  L  V  L  S  H  F  I  L  F  H  F  Y  H  L  A  S  L  L  F  V  G  M  *  C  C  D  *  I  K  H  V  C  G  M  R  C  Y  Q  D  I  S  C  V  V  L  L  F  V  S  L  I  L  F  F  *  K  N  I  P  C  E  F  *  P  F  P  P  H  Y  F  F  G  T  S  R  W  T  Q  L  L  L  V  T  H  I  E  C  I  K  C  I  M  S  I  F  Y  Q  L </first_frame>
            <second_frame>  E  A  Q  T  P  S  N  F  *  H  H  F  S  R  S  P  A  Y  R  Y  H  H  C  P  L  S  G  G  G  G  G  G  G  S  P  P  G  I  F  L  N  L  S  N  S  L  P  Y  S  L  S  Q  I  *  F  S  I  L  K  L  I  E  S  T  Q  *  W  L  R  R  T  K  R  I  N  L  R  L  I  F  A  :  A  S  K   : G  R  R  L  V  L  M  V  H  P  M  L  P  K   : V  N  T  G  V  L  N  L  C  S  R  G  I  K  V  L  M  D  L  A  G  V  H  L  I  P  T  L  T  L  M  L  H  G  T  S  I  L  L  Q  R :   I  Q  I  M  T  I  S  R  N  L  L  F  L  E  M  M  I  G  A  *  P  L  L  K  R  G  P  N  S  P  T  H  Y  R  I  K  C  H  P  L  I  L  F  L  A  R  Q  V  T  M  L  G  *  T  T  R  S  P  N  K  A  L  S  L  I  L  F  L  A  L  Q  V  T  M  L  G  S  V  I  Q  T  T  H  S  R  S  K  A  L  S  L  I  L  F  Q  V  P  Q  V  T  T  L  D  S  L  R  L  I  T  C  S  R  G  K  V  P  S  L  I  L  F  L  A  H  Q  L  I  I  Q  E  A  P  R  M  Q  I  I  C  S  R  I  R  V  R  L  P  L  G  T  R  F  P  A  H  L  C  T  V  L  Q  T  R  L  A  D  I  V  E  R  F  E  E  T  R  T  A  S  P  D  L  I  P  L  T  *  M  I  V  A  P  L  A  P  V  T  L  F  Q  D  L  I  Q  C  A  A  P  E  T  L  T  T  I  M  V  H  S  S  N  G  T  H  L  L  G  L  I  H  F  A  A  P  Q  T  L  T  I  I  L  G  S  F  L  L  A  N  H  *  V  G  L  I  P  *  V  V  P  G  T  Q  I  I  V  M  V  S  H  L  L  M  M  R  I  R  S  V  Q  M  T  H  L  R  R  R  P  R  V  R  H  Q  G  E  I  L  I  V  G  K  R  F  D  G  M  M  E  Y  *  C  *  V  I  L  F  Y  F  I  F  I  I  W  P  V  C  C  L  *  V  C  N  V  V  T  R  *  N  M  C  A  A  C  V  A  I  K  I  *  A  V  L  Y  Y  Y  L  L  A  *  F  Y  F  F  K  K  I  F  H  V  N  F  D  L  F  H  H  I  I  F  S  E  L  Q  G  G  H  N  F  C  W  S  P  I  L  N  V  *  S  V  *  *  A  F  F  I  S   </second_frame>
            <third_frame>   K  H  K  P  H  Q  T  S  D  I  T  F  L  D  P  P  P  I  D  T  T  T  V  H  C  P  A  A  A  A  A  A  D  H  H  L  G  S  S  *  T  S  L  I  L  C  P  I  P  Y  H  R  S  N  S  V  F  S  N  *  L  N  R  L  S  N  G  C  A  E  P  N  G  S  I  *  G  L  F  S  Q :   H  L  K  :  E  G  D  *  F  *  W  F  T  Q  C  C  P  K  :  *  T  L  G  Y  *  I  C  V  L  E  G  *  R  F  *  W  I  W  L  G  Y  I  *  Y  Q  L  *  H  *  C  C  M  G  R  Q  F  C  C  K   : G  F  R  S  *  Q  S  Q  G  I  F  S  F  W  R  *  *  L  G  L  S  P  Y  *  N  G  V  Q  T  V  Q  H  T  T  E  S  N  A  I  L  *  F  C  S  *  H  A  K  L  Q  C  W  D  R  Q  H  V  P  Q  T  K  P  F  L  *  F  C  S  *  H  S  K  L  Q  C  W  V  Q  L  F  R  Q  H  I  P  E  A  K  P  F  L  *  F  C  S  K  Y  P  K  L  Q  L  W  I  H  S  D  *  *  L  V  L  E  A  K  S  L  L  *  F  C  S  *  H  T  S  L  *  F  R  R  L  P  E  C  R  *  Y  V  P  E  *  E  S  V  C  L  W  G  L  G  S  Q  H  T  Y  V  Q  F  Y  K  L  A  S  Q  T  *  W  K  D  L  K  K  L  E  Q  L  L  Q  I  *  S  L  *  H  E  *  *  W  P  L  W  H  P  *  L  S  F  K  I  *  F  N  A  Q  H  Q  R  L  *  L  R  S  W  F  I  P  A  T  G  L  I  C  *  V  *  F  I  S  Q  H  R  R  L  *  L  *  F  W  A  L  S  S  S  R  I  T  K  *  V  *  F  H  E  *  Y  Q  G  H  R  S  S  S  W  F  H  I  F  *  *  C  G  S  V  R  F  K  *  P  I  *  D  V  G  R  E  S  D  T  K  E  R  F  *  *  L  E  S  V  L  T  G  *  W  S  T  S  A  K  S  F  Y  S  I  S  F  L  S  F  G  Q  F  V  V  C  R  Y  V  M  L  *  L  D  K  T  C  V  R  H  A  L  L  S  R  Y  K  L  C  C  T  I  I  C  *  L  D  F  I  F  L  K  K  Y  S  M  *  I  L  T  F  S  T  T  L  F  F  R  N  F  K  V  D  T  T  F  A  G  H  P  Y  *  M  Y  K  V  Y  N  E  H  F  L  S  V  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0291P19.2" strand="+"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="54151" stop="54152"/>
                    <exon start="60148" stop="60189"/>
                    <exon start="60362" stop="60482"/>
                    <exon start="60683" stop="61195"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>675</number_coding_nucleotides>
                  <number_encoded_amino_acids>225</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RKETSFDGSPNAAQSEHWGTESVFSRDKGFDGSGWGTFDTNFDTDAAWDVNSVAKDSDHDNLKESSLFGDDDWGLAPIKTGSKQSNTLPNQMPSFDSVPSTPSYNAGIDNTFPKQSPFFDSVPSTPSYNAGFSYSDNTFPKQSPFFDSVPSTPSYNSGFTQTDNLFSRQSPFFDSVPSTPAYNSGGSPNADNMFQNKSPFAFGDSVPSTPMYSSTNSPRRHSGKI*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0291P19.2" strand="+"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="61196" stop="61582"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>384</number_coding_nucleotides>
                  <number_encoded_amino_acids>128</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RNSNSFSRFDPFNMNDSGPFGTRDSLSRFDSMRSTRDSDYDHGSFQQRDSFARFDSFRSTADSDYNFGLFPPRESLSRFDSMSSTRDTDHRHGFTSFDDADPFGSNDPFKTSAESQTPRRDSDSWKAF*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="49881" e_stop="50241"/>
            <exon e_start="51375" e_stop="51919"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.997" e_score="0.991"/>
          <exon-only e_score="0.993"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.991">
            <gDNA_exon_boundary e_start="49881" e_stop="50241" e_length="361"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.997">
            <gDNA_intron_boundary i_start="50242" i_stop="51374" i_length="1133"/>
          </intron>
          <exon e_serial="2" e_score="0.993">
            <gDNA_exon_boundary e_start="51375" e_stop="51919" e_length="545"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49881" stop="50241"/>
              <exon start="51375" stop="51661"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E739670" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49908" stop="50241"/>
              <exon start="51375" stop="51919"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E738396" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49912" stop="50241"/>
              <exon start="51375" stop="51575"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E322259" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TAATGCCTATGTGCATTGTGCTGTCCGAAGCACAAACCCCATCAAACTTCTGACATCACTTTTCTCGATCCCCCGCCTATCGATACCACCACTGTCCACTGTCCGGCGGCGGCGGCGGCGGCGGATCACCACCTGGGATCTTCTTAAACCTCTCTAATTCTCTGCCCTATTCCTTATCACAGATCTAATTCAGTATTCTCAAACTGATTGAATCGACTCAGTAATGGCTGCGCAGAACCAAACGGATCAATTTGAGGCTTATTTTCGCAGAGCAGATTTGGATCAGGATGGTCGGATCAGTGGTGTTGAGGCTGTTTCCTTCTTTCAAGGCTCTAATTTGCCTAAACCAGTCCTTGCTCAG : ATATGGACATATGTTGATCAAAGTCGGACCGGTTTCCTTAGCCGTCAGGAATTTTTCAACTATCTTAAGCTTGTTACAGTGGCGCAGAAACGAGAGTTGACCCCAGAAATAGTGAAAGCTGCACTATTTACGCCAGCTTCAGCTAAAATTCCTGCCCCACAGATAAACCTTGCAGCTGTAGCAGGTCCTCGTCCAGCAAATAGAGTTGGTTCTGCAGTGCCTCCAGTTAGTCGTGCTGCTCCAACAGAAGCACCGAGTTTTGGCATTAGGGGTCAACAGGGTTTACCAGTTCCGCAGAGCCAGTATATGCGGCCTCCTCGACCCTCCGTTCAAAGCACCAGTTTCCCATCTCAATCAGGTGCTTCTAGTCATGGAATGCCTGGTGGTACCATGGCAGCTTTTAGTCAAGCCAATTCTTCTGATTGGCTTTCTGGTAATGGTGGCTCCCAAGCAGCTGTTACTTCCCAAGCTCCTAATATCAGTATAAATTCTAGAAGTCAGGATGGATTTGATCATGCTTCTCCACAACAGAACCAACAAAAGAC</gDNA_template>
            <first_frame> *  C  L  C  A  L  C  C  P  K  H  K  P  H  Q  T  S  D  I  T  F  L  D  P  P  P  I  D  T  T  T  V  H  C  P  A  A  A  A  A  A  D  H  H  L  G  S  S  *  T  S  L  I  L  C  P  I  P  Y  H  R  S  N  S  V  F  S  N  *  L  N  R  L  S  N  G  C  A  E  P  N  G  S  I  *  G  L  F  S  Q  S  R  F  G  S  G  W  S  D  Q  W  C  *  G  C  F  L  L  S  R  L  *  F  A  *  T  S  P  C  S   : D  M  D  I  C  *  S  K  S  D  R  F  P  *  P  S  G  I  F  Q  L  S  *  A  C  Y  S  G  A  E  T  R  V  D  P  R  N  S  E  S  C  T  I  Y  A  S  F  S  *  N  S  C  P  T  D  K  P  C  S  C  S  R  S  S  S  S  K  *  S  W  F  C  S  A  S  S  *  S  C  C  S  N  R  S  T  E  F  W  H  *  G  S  T  G  F  T  S  S  A  E  P  V  Y  A  A  S  S  T  L  R  S  K  H  Q  F  P  I  S  I  R  C  F  *  S  W  N  A  W  W  Y  H  G  S  F  *  S  S  Q  F  F  *  L  A  F  W  *  W  W  L  P  S  S  C  Y  F  P  S  S  *  Y  Q  Y  K  F  *  K  S  G  W  I  *  S  C  F  S  T  T  E  P  T  K  D </first_frame>
            <second_frame>  N  A  Y  V  H  C  A  V  R  S  T  N  P  I  K  L  L  T  S  L  F  S  I  P  R  L  S  I  P  P  L  S  T  V  R  R  R  R  R  R  R  I  T  T  W  D  L  L  K  P  L  *  F  S  A  L  F  L  I  T  D  L  I  Q  Y  S  Q  T  D  *  I  D  S  V  M  A  A  Q  N  Q  T  D  Q  F  E  A  Y  F  R  R  A  D  L  D  Q  D  G  R  I  S  G  V  E  A  V  S  F  F  Q  G  S  N  L  P  K  P  V  L  A  Q  :  I  W  T  Y  V  D  Q  S  R  T  G  F  L  S  R  Q  E  F  F  N  Y  L  K  L  V  T  V  A  Q  K  R  E  L  T  P  E  I  V  K  A  A  L  F  T  P  A  S  A  K  I  P  A  P  Q  I  N  L  A  A  V  A  G  P  R  P  A  N  R  V  G  S  A  V  P  P  V  S  R  A  A  P  T  E  A  P  S  F  G  I  R  G  Q  Q  G  L  P  V  P  Q  S  Q  Y  M  R  P  P  R  P  S  V  Q  S  T  S  F  P  S  Q  S  G  A  S  S  H  G  M  P  G  G  T  M  A  A  F  S  Q  A  N  S  S  D  W  L  S  G  N  G  G  S  Q  A  A  V  T  S  Q  A  P  N  I  S  I  N  S  R  S  Q  D  G  F  D  H  A  S  P  Q  Q  N  Q  Q  K   </second_frame>
            <third_frame>   M  P  M  C  I  V  L  S  E  A  Q  T  P  S  N  F  *  H  H  F  S  R  S  P  A  Y  R  Y  H  H  C  P  L  S  G  G  G  G  G  G  G  S  P  P  G  I  F  L  N  L  S  N  S  L  P  Y  S  L  S  Q  I  *  F  S  I  L  K  L  I  E  S  T  Q  *  W  L  R  R  T  K  R  I  N  L  R  L  I  F  A  E  Q  I  W  I  R  M  V  G  S  V  V  L  R  L  F  P  S  F  K  A  L  I  C  L  N  Q  S  L  L  R :   Y  G  H  M  L  I  K  V  G  P  V  S  L  A  V  R  N  F  S  T  I  L  S  L  L  Q  W  R  R  N  E  S  *  P  Q  K  *  *  K  L  H  Y  L  R  Q  L  Q  L  K  F  L  P  H  R  *  T  L  Q  L  *  Q  V  L  V  Q  Q  I  E  L  V  L  Q  C  L  Q  L  V  V  L  L  Q  Q  K  H  R  V  L  A  L  G  V  N  R  V  Y  Q  F  R  R  A  S  I  C  G  L  L  D  P  P  F  K  A  P  V  S  H  L  N  Q  V  L  L  V  M  E  C  L  V  V  P  W  Q  L  L  V  K  P  I  L  L  I  G  F  L  V  M  V  A  P  K  Q  L  L  L  P  K  L  L  I  S  V  *  I  L  E  V  R  M  D  L  I  M  L  L  H  N  R  T  N  K  R  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0291P19.2" strand="+"/>
                <serials PGL_serial="10" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="50092" stop="50241"/>
                    <exon start="51375" stop="51917"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>693</number_coding_nucleotides>
                  <number_encoded_amino_acids>231</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IDSVMAAQNQTDQFEAYFRRADLDQDGRISGVEAVSFFQGSNLPKPVLAQIWTYVDQSRTGFLSRQEFFNYLKLVTVAQKRELTPEIVKAALFTPASAKIPAPQINLAAVAGPRPANRVGSAVPPVSRAAPTEAPSFGIRGQQGLPVPQSQYMRPPRPSVQSTSFPSQSGASSHGMPGGTMAAFSQANSSDWLSGNGGSQAAVTSQAPNISINSRSQDGFDHASPQQNQQK</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="58136" e_stop="58145"/>
            <exon e_start="58219" e_stop="58317"/>
            <exon e_start="58443" e_stop="58511"/>
            <exon e_start="58588" e_stop="58702"/>
            <exon e_start="59495" e_stop="59563"/>
            <exon e_start="59714" e_stop="60019"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.995" acc_prob="0.982" e_score="1.000"/>
          <exon-intron don_prob="0.993" acc_prob="0.989" e_score="0.980"/>
          <exon-intron don_prob="0.997" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.870" acc_prob="0.998" e_score="0.991"/>
          <exon-intron don_prob="0.902" acc_prob="0.973" e_score="0.986"/>
          <exon-only e_score="0.974"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="58136" e_stop="58145" e_length="10"/>
          </exon>
          <intron i_serial="1" don_prob="0.995" acc_prob="0.982">
            <gDNA_intron_boundary i_start="58146" i_stop="58218" i_length="73"/>
          </intron>
          <exon e_serial="2" e_score="0.980">
            <gDNA_exon_boundary e_start="58219" e_stop="58317" e_length="99"/>
          </exon>
          <intron i_serial="2" don_prob="0.993" acc_prob="0.989">
            <gDNA_intron_boundary i_start="58318" i_stop="58442" i_length="125"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="58443" e_stop="58511" e_length="69"/>
          </exon>
          <intron i_serial="3" don_prob="0.997" acc_prob="0.995">
            <gDNA_intron_boundary i_start="58512" i_stop="58587" i_length="76"/>
          </intron>
          <exon e_serial="4" e_score="0.991">
            <gDNA_exon_boundary e_start="58588" e_stop="58702" e_length="115"/>
          </exon>
          <intron i_serial="4" don_prob="0.870" acc_prob="0.998">
            <gDNA_intron_boundary i_start="58703" i_stop="59494" i_length="792"/>
          </intron>
          <exon e_serial="5" e_score="0.986">
            <gDNA_exon_boundary e_start="59495" e_stop="59563" e_length="69"/>
          </exon>
          <intron i_serial="5" don_prob="0.902" acc_prob="0.973">
            <gDNA_intron_boundary i_start="59564" i_stop="59713" i_length="150"/>
          </intron>
          <exon e_serial="6" e_score="0.974">
            <gDNA_exon_boundary e_start="59714" e_stop="60019" e_length="306"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58136" stop="58145"/>
              <exon start="58219" stop="58317"/>
              <exon start="58443" stop="58511"/>
              <exon start="58588" stop="58702"/>
              <exon start="59495" stop="59563"/>
              <exon start="59714" stop="60019"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E407646" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58136" stop="58145"/>
              <exon start="58219" stop="58317"/>
              <exon start="58443" stop="58511"/>
              <exon start="58588" stop="58702"/>
              <exon start="59495" stop="59563"/>
              <exon start="59714" stop="59882"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E421353" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CAAAAGAGAG : GTTGAGTTATTGGCTAAAAAATATGAAGAGAAATACAAGCAGACAGGAGACGTTGCTTCTAAATTGACCATTGAAGAGGCCACCTTTCGGGATATTCAG : GAGAAAAAAATGGAGCTATACAAGGAAATTGTTAAAATGGATCAAGATGGCAAGACTGATGGTATCCAG : GACCGTGCTAGTCACATTCAGGTGAACCTTGAGGAGCTAGTAAAATCACTGAATGAACGGTGCAAAACTTATGGTTTACGAGCTAAACCAACTACACTGCTTGAGCTTCCATTTG : GTTGGCAACCAGGCATCCAAGAGGTTGCAGCAGACTGGGATGAAGAGTGGGATAAGTTTGAAGATGAAG : GATTCACATTTGTGAAAGAGCTGACACTCGATGTGAAAAACGTCATTGCCCCTCCTAAAACAAAGTCATCATTGGTTCGTGAGAAAGCATCTTCTTTAGCTGAACATGATTCTGGAAAATCATCTGCTGATGCTGATACTGATGCAAAGATAGATAAGCTGTCAAACCATGTACAAGCTAGAGAAGTTGGTGACATGGAATCTGCACATGGACATCAGCAAACAGCAAGAAGTCCAACTGATAGTCCATCAAGGAGTAATGCAGTTGAAAGCCCGTCAAAAGAAGTCCAAGAGTCTATGTACGGGA</gDNA_template>
            <first_frame> Q  K  R   : G  *  V  I  G  *  K  I  *  R  E  I  Q  A  D  R  R  R  C  F  *  I  D  H  *  R  G  H  L  S  G  Y  S   : G  E  K  N  G  A  I  Q  G  N  C  *  N  G  S  R  W  Q  D  *  W  Y  P   : G  P  C  *  S  H  S  G  E  P  *  G  A  S  K  I  T  E  *  T  V  Q  N  L  W  F  T  S  *  T  N  Y  T  A  *  A  S  I  W :   L  A  T  R  H  P  R  G  C  S  R  L  G  *  R  V  G  *  V  *  R  *  R :   I  H  I  C  E  R  A  D  T  R  C  E  K  R  H  C  P  S  *  N  K  V  I  I  G  S  *  E  S  I  F  F  S  *  T  *  F  W  K  I  I  C  *  C  *  Y  *  C  K  D  R  *  A  V  K  P  C  T  S  *  R  S  W  *  H  G  I  C  T  W  T  S  A  N  S  K  K  S  N  *  *  S  I  K  E  *  C  S  *  K  P  V  K  R  S  P  R  V  Y  V  R   </first_frame>
            <second_frame>  K  R  E  :  V  E  L  L  A  K  K  Y  E  E  K  Y  K  Q  T  G  D  V  A  S  K  L  T  I  E  E  A  T  F  R  D  I  Q  :  E  K  K  M  E  L  Y  K  E  I  V  K  M  D  Q  D  G  K  T  D  G  I  Q  :  D  R  A  S  H  I  Q  V  N  L  E  E  L  V  K  S  L  N  E  R  C  K  T  Y  G  L  R  A  K  P  T  T  L  L  E  L  P  F   : G  W  Q  P  G  I  Q  E  V  A  A  D  W  D  E  E  W  D  K  F  E  D  E   : G  F  T  F  V  K  E  L  T  L  D  V  K  N  V  I  A  P  P  K  T  K  S  S  L  V  R  E  K  A  S  S  L  A  E  H  D  S  G  K  S  S  A  D  A  D  T  D  A  K  I  D  K  L  S  N  H  V  Q  A  R  E  V  G  D  M  E  S  A  H  G  H  Q  Q  T  A  R  S  P  T  D  S  P  S  R  S  N  A  V  E  S  P  S  K  E  V  Q  E  S  M  Y  G  </second_frame>
            <third_frame>   K  E  R :   L  S  Y  W  L  K  N  M  K  R  N  T  S  R  Q  E  T  L  L  L  N  *  P  L  K  R  P  P  F  G  I  F  R :   R  K  K  W  S  Y  T  R  K  L  L  K  W  I  K  M  A  R  L  M  V  S  R :   T  V  L  V  T  F  R  *  T  L  R  S  *  *  N  H  *  M  N  G  A  K  L  M  V  Y  E  L  N  Q  L  H  C  L  S  F  H  L  :  V  G  N  Q  A  S  K  R  L  Q  Q  T  G  M  K  S  G  I  S  L  K  M  K  :  D  S  H  L  *  K  S  *  H  S  M  *  K  T  S  L  P  L  L  K  Q  S  H  H  W  F  V  R  K  H  L  L  *  L  N  M  I  L  E  N  H  L  L  M  L  I  L  M  Q  R  *  I  S  C  Q  T  M  Y  K  L  E  K  L  V  T  W  N  L  H  M  D  I  S  K  Q  Q  E  V  Q  L  I  V  H  Q  G  V  M  Q  L  K  A  R  Q  K  K  S  K  S  L  C  T  G </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0291P19.2" strand="+"/>
                <serials PGL_serial="10" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="58137" stop="58145"/>
                    <exon start="58219" stop="58317"/>
                    <exon start="58443" stop="58511"/>
                    <exon start="58588" stop="58702"/>
                    <exon start="59495" stop="59563"/>
                    <exon start="59714" stop="60018"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>666</number_coding_nucleotides>
                  <number_encoded_amino_acids>222</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KREVELLAKKYEEKYKQTGDVASKLTIEEATFRDIQEKKMELYKEIVKMDQDGKTDGIQDRASHIQVNLEELVKSLNERCKTYGLRAKPTTLLELPFGWQPGIQEVAADWDEEWDKFEDEGFTFVKELTLDVKNVIAPPKTKSSLVREKASSLAEHDSGKSSADADTDAKIDKLSNHVQAREVGDMESAHGHQQTARSPTDSPSRSNAVESPSKEVQESMYG</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="4">
          <exon_coordinates>
            <exon e_start="52151" e_stop="52467"/>
            <exon e_start="53810" e_stop="54028"/>
            <exon e_start="56855" e_stop="56996"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.950" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="0.958"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="52151" e_stop="52467" e_length="317"/>
          </exon>
          <intron i_serial="1" don_prob="0.950" acc_prob="0.997">
            <gDNA_intron_boundary i_start="52468" i_stop="53809" i_length="1342"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="53810" e_stop="54028" e_length="219"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="0.999">
            <gDNA_intron_boundary i_start="54029" i_stop="56854" i_length="2826"/>
          </intron>
          <exon e_serial="3" e_score="0.958">
            <gDNA_exon_boundary e_start="56855" e_stop="56996" e_length="142"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52151" stop="52467"/>
              <exon start="53810" stop="54026"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E326361" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52432" stop="52467"/>
              <exon start="53810" stop="54028"/>
              <exon start="56855" stop="56996"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E441044" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="4" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGCAGGGCTCCAACATCCAGTAAAGGCCAGCCCAATTGTTTCACAAGTTGCACTTCCGCAGAAACCAGTAAATCAGCATCAGCAAGCTCAGTTGACTGGGAGACCAAACAAACAGGTCTTAGTGCCAAGTGCTGGTGCAAATCCTAATGCAGCTGGAAATTCTCGTTCCAGTCAGTCTCAGATTCCTTGGCCAAGAATGACCCGGTCTGATTATCAGAAGTACAGCAAAGTATTTATGGCTGTGGACTCAGACAGGGATGGAAAAATTTCTGGCCTGGAGGCAAGGAACCTCTTTCTAAGTTGGAAGCTGCCTCGAG : AGGTGCTGAAACAGGTGTGGGATTTATCTGATCAAGACAACGACAGCATGCTGTCTTTAAGGGAATTCTGCATTGCGCTTTACCTGATGGAGCGGCACAGGGAAGGTCACCCTCTTCCTTCAGTCCTTCCGACCAATCTTATTTTCGACGAGTCGTTATTACCTGCTTCTGGTCAGCCTGTCCCACCACATGGTGCTGTTGCTTGGAGACACACACCAG : CCACCCAGCAAACACAGGGGCCAAGGGTTGTTCCAGGACAGATGGCTTCTGGCGCTCCAGGAAGGCCTCCACGTCCAGTTCCTATTCCCCAGCCCAATGAAGTTGTGCAGCCTGGTCAACAGAAGCCTAAAGTTCCTGCACT</gDNA_template>
            <first_frame> C  R  A  P  T  S  S  K  G  Q  P  N  C  F  T  S  C  T  S  A  E  T  S  K  S  A  S  A  S  S  V  D  W  E  T  K  Q  T  G  L  S  A  K  C  W  C  K  S  *  C  S  W  K  F  S  F  Q  S  V  S  D  S  L  A  K  N  D  P  V  *  L  S  E  V  Q  Q  S  I  Y  G  C  G  L  R  Q  G  W  K  N  F  W  P  G  G  K  E  P  L  S  K  L  E  A  A  S  R :   G  A  E  T  G  V  G  F  I  *  S  R  Q  R  Q  H  A  V  F  K  G  I  L  H  C  A  L  P  D  G  A  A  Q  G  R  S  P  S  S  F  S  P  S  D  Q  S  Y  F  R  R  V  V  I  T  C  F  W  S  A  C  P  T  T  W  C  C  C  L  E  T  H  T  S :   H  P  A  N  T  G  A  K  G  C  S  R  T  D  G  F  W  R  S  R  K  A  S  T  S  S  S  Y  S  P  A  Q  *  S  C  A  A  W  S  T  E  A  *  S  S  C  T </first_frame>
            <second_frame>  A  G  L  Q  H  P  V  K  A  S  P  I  V  S  Q  V  A  L  P  Q  K  P  V  N  Q  H  Q  Q  A  Q  L  T  G  R  P  N  K  Q  V  L  V  P  S  A  G  A  N  P  N  A  A  G  N  S  R  S  S  Q  S  Q  I  P  W  P  R  M  T  R  S  D  Y  Q  K  Y  S  K  V  F  M  A  V  D  S  D  R  D  G  K  I  S  G  L  E  A  R  N  L  F  L  S  W  K  L  P  R   : E  V  L  K  Q  V  W  D  L  S  D  Q  D  N  D  S  M  L  S  L  R  E  F  C  I  A  L  Y  L  M  E  R  H  R  E  G  H  P  L  P  S  V  L  P  T  N  L  I  F  D  E  S  L  L  P  A  S  G  Q  P  V  P  P  H  G  A  V  A  W  R  H  T  P   : A  T  Q  Q  T  Q  G  P  R  V  V  P  G  Q  M  A  S  G  A  P  G  R  P  P  R  P  V  P  I  P  Q  P  N  E  V  V  Q  P  G  Q  Q  K  P  K  V  P  A   </second_frame>
            <third_frame>   Q  G  S  N  I  Q  *  R  P  A  Q  L  F  H  K  L  H  F  R  R  N  Q  *  I  S  I  S  K  L  S  *  L  G  D  Q  T  N  R  S  *  C  Q  V  L  V  Q  I  L  M  Q  L  E  I  L  V  P  V  S  L  R  F  L  G  Q  E  *  P  G  L  I  I  R  S  T  A  K  Y  L  W  L  W  T  Q  T  G  M  E  K  F  L  A  W  R  Q  G  T  S  F  *  V  G  S  C  L  E  :  R  C  *  N  R  C  G  I  Y  L  I  K  T  T  T  A  C  C  L  *  G  N  S  A  L  R  F  T  *  W  S  G  T  G  K  V  T  L  F  L  Q  S  F  R  P  I  L  F  S  T  S  R  Y  Y  L  L  L  V  S  L  S  H  H  M  V  L  L  L  G  D  T  H  Q  :  P  P  S  K  H  R  G  Q  G  L  F  Q  D  R  W  L  L  A  L  Q  E  G  L  H  V  Q  F  L  F  P  S  P  M  K  L  C  S  L  V  N  R  S  L  K  F  L  H  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0291P19.2" strand="+"/>
                <serials PGL_serial="10" AGS_serial="4" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="52152" stop="52467"/>
                    <exon start="53810" stop="54028"/>
                    <exon start="56855" stop="56994"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>675</number_coding_nucleotides>
                  <number_encoded_amino_acids>225</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>AGLQHPVKASPIVSQVALPQKPVNQHQQAQLTGRPNKQVLVPSAGANPNAAGNSRSSQSQIPWPRMTRSDYQKYSKVFMAVDSDRDGKISGLEARNLFLSWKLPREVLKQVWDLSDQDNDSMLSLREFCIALYLMERHREGHPLPSVLPTNLIFDESLLPASGQPVPPHGAVAWRHTPATQQTQGPRVVPGQMASGAPGRPPRPVPIPQPNEVVQPGQQKPKVPA</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="+" PGL_start="64227" PGL_stop="64795"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="64227" e_stop="64795"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="64227" e_stop="64795" e_length="569"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64227" stop="64719"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E284623" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64229" stop="64786"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E265460" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64584" stop="64795"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E744466" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGATAACCAAATAGATCATTTTTGTGTAATTATAACTTCTTGTAGTAAATTCCAATCGTACATGAACATGACCCTCACACCCCTCAACATACTCAAAAATAATAGCTTAACAAATGAATTACTAGTAGGAACAAAGTGTGGACTTACTTGCCCTTTGCTTATGAATAAAAACAATCTCTTCAATATACATCTTATGAAATGCTATGAGGAAAAGAAACTAAGCTTTTTTTGCAAAGATCTCCATCAGGGAAGAAGAGGTTCCATAGACGGCAAAAATTGTGCCCATGACAATCAATGCAGCATCAGAAGCAAAACCATACCATCTCAATTCATCTTTGAACGCAATTAAGTGAAACAAAGAAGGCAACACAAATCCCAAAACAATGCACACACTGCTCCCAACAAGTGACAAGAAATCAGCAAAATTGGGCACCGCCAATGCAACAAAAGTCACTGCTAAAACCACAAGCCATCTCAACCACACACAGTACCTGCCTTCCCAGAATCTCCTTTCCATTACTTCATAGACTGGATTCATCATAAGGGGGAAAGAGAAAAACAGGTTTATG</gDNA_template>
            <first_frame> R  *  P  N  R  S  F  L  C  N  Y  N  F  L  *  *  I  P  I  V  H  E  H  D  P  H  T  P  Q  H  T  Q  K  *  *  L  N  K  *  I  T  S  R  N  K  V  W  T  Y  L  P  F  A  Y  E  *  K  Q  S  L  Q  Y  T  S  Y  E  M  L  *  G  K  E  T  K  L  F  L  Q  R  S  P  S  G  K  K  R  F  H  R  R  Q  K  L  C  P  *  Q  S  M  Q  H  Q  K  Q  N  H  T  I  S  I  H  L  *  T  Q  L  S  E  T  K  K  A  T  Q  I  P  K  Q  C  T  H  C  S  Q  Q  V  T  R  N  Q  Q  N  W  A  P  P  M  Q  Q  K  S  L  L  K  P  Q  A  I  S  T  T  H  S  T  C  L  P  R  I  S  F  P  L  L  H  R  L  D  S  S  *  G  G  K  R  K  T  G  L   </first_frame>
            <second_frame>  D  N  Q  I  D  H  F  C  V  I  I  T  S  C  S  K  F  Q  S  Y  M  N  M  T  L  T  P  L  N  I  L  K  N  N  S  L  T  N  E  L  L  V  G  T  K  C  G  L  T  C  P  L  L  M  N  K  N  N  L  F  N  I  H  L  M  K  C  Y  E  E  K  K  L  S  F  F  C  K  D  L  H  Q  G  R  R  G  S  I  D  G  K  N  C  A  H  D  N  Q  C  S  I  R  S  K  T  I  P  S  Q  F  I  F  E  R  N  *  V  K  Q  R  R  Q  H  K  S  Q  N  N  A  H  T  A  P  N  K  *  Q  E  I  S  K  I  G  H  R  Q  C  N  K  S  H  C  *  N  H  K  P  S  Q  P  H  T  V  P  A  F  P  E  S  P  F  H  Y  F  I  D  W  I  H  H  K  G  E  R  E  K  Q  V  Y  </second_frame>
            <third_frame>   I  T  K  *  I  I  F  V  *  L  *  L  L  V  V  N  S  N  R  T  *  T  *  P  S  H  P  S  T  Y  S  K  I  I  A  *  Q  M  N  Y  *  *  E  Q  S  V  D  L  L  A  L  C  L  *  I  K  T  I  S  S  I  Y  I  L  *  N  A  M  R  K  R  N  *  A  F  F  A  K  I  S  I  R  E  E  E  V  P  *  T  A  K  I  V  P  M  T  I  N  A  A  S  E  A  K  P  Y  H  L  N  S  S  L  N  A  I  K  *  N  K  E  G  N  T  N  P  K  T  M  H  T  L  L  P  T  S  D  K  K  S  A  K  L  G  T  A  N  A  T  K  V  T  A  K  T  T  S  H  L  N  H  T  Q  Y  L  P  S  Q  N  L  L  S  I  T  S  *  T  G  F  I  I  R  G  K  E  K  N  R  F  M </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0291P19.2" strand="+"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="64228" stop="64575"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>345</number_coding_nucleotides>
                  <number_encoded_amino_acids>115</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DNQIDHFCVIITSCSKFQSYMNMTLTPLNILKNNSLTNELLVGTKCGLTCPLLMNKNNLFNIHLMKCYEEKKLSFFCKDLHQGRRGSIDGKNCAHDNQCSIRSKTIPSQFIFERN*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0291P19.2" strand="+"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="64566" stop="64769"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>201</number_coding_nucleotides>
                  <number_encoded_amino_acids>67</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TQLSETKKATQIPKQCTHCSQQVTRNQQNWAPPMQQKSLLKPQAISTTHSTCLPRISFPLLHRLDSS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="-" PGL_start="65888" PGL_stop="64724"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="65888" e_stop="64724"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="65888" e_stop="64724" e_length="1165"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="65888" stop="65009"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E721744" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="65863" stop="64990"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E707458" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="65854" stop="65087"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E343092" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="65743" stop="64983"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E704481" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="65652" stop="64912"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E704264" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="65246" stop="64724"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E309190" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CATACCAAATATACCTTGTTTCCAAGAAGATTCAAAAAGAGCAAGAGAAAAGATTCAATCTTGATTTTTTTCTTCTTCTTGTTAATCAAATCTTAAAGTTTTGATTTTTAATATCTGGGGTTTGTGTAGAAGTTTGATTGGATTCTTGATTTTGGGATAATAAGAGTATGGGGTTTAAGAAAGATGAAGCAAGTTCATCTTCTCATGTTTTGAGTATCCCAAGAGAAGATACACCACTTCTTGGCAAGATTCAACATCTTTCTTCTCCTTCCAAGACTTTTGCTAATGTTTTCATAGCCATAGTTGGAGCTGGAGTTCTTGGTCTTCCTTACACCTTTAAGAGAACTGGATGGGTTATGGGTTCTATCATGCTCTTCTCAGTTGCCTTTCTTACCTACTACTGTATGATGCTTTTGGTCTATTCAAGGCGTAAGATTGAATCCCACATAAAAGCTGCAAAAATTTCATCTTTTGGTGATTTGGGGTTTGCTGTGTGTGGACCTGTTGGTAGATTGTCTGTTGATCTTATGATTATTCTATCTCAAGCTGGTTTTTGCGTTAGCTACTTGATTTTTGTGGCTAATACTTTGGCATATTTGTTCAATTATTCAATTGCAAAACCTGATCCCAAAATCTTGGGACTTTCACCCAAGGCAGCTTATATATGGGGCTGTTTCCCATTTCAGTTGGGATTGAATTCAATACCTACTCTGACCCTTTTAGCCCCTTTAAGTATTTTTGCTGATATTGCTGAATTAGGAGCTATGGGTGTGGTGATGGTTGAGGATGTGATGATTTACCTTCAGAACAGGCCTGTTCTTGAAATGTTTGGTGGGTTCAATGTGTTTTTCTATGGACTTGGTGTGGCTGTGTATGCTTTTGAAGGGATTGGTATGGTCTTACCTCTGGAATCAGAGACAAGAGACAAGGACAAGTTTGGGAAAATCTTGGGATTGGCAATGGGCTTCATATCATTGCTGTTTGGTGCTTTTGGAGTATTGGGCTACTTTGCATTTGGGGAAGACACTAAAGATATAATCACTACAAATCTTGGGCAGGGATTGCTCAGCACCTTTGTTCAACTTGGCCTTTGCATAAACCTGTTTTTCTCTTTCCCCCTTATGATGAATCCAGTCTATGAAGTAATGGAAAGGAGATTCTGGGA</gDNA_template>
            <first_frame> H  T  K  Y  T  L  F  P  R  R  F  K  K  S  K  R  K  D  S  I  L  I  F  F  F  F  L  L  I  K  S  *  S  F  D  F  *  Y  L  G  F  V  *  K  F  D  W  I  L  D  F  G  I  I  R  V  W  G  L  R  K  M  K  Q  V  H  L  L  M  F  *  V  S  Q  E  K  I  H  H  F  L  A  R  F  N  I  F  L  L  L  P  R  L  L  L  M  F  S  *  P  *  L  E  L  E  F  L  V  F  L  T  P  L  R  E  L  D  G  L  W  V  L  S  C  S  S  Q  L  P  F  L  P  T  T  V  *  C  F  W  S  I  Q  G  V  R  L  N  P  T  *  K  L  Q  K  F  H  L  L  V  I  W  G  L  L  C  V  D  L  L  V  D  C  L  L  I  L  *  L  F  Y  L  K  L  V  F  A  L  A  T  *  F  L  W  L  I  L  W  H  I  C  S  I  I  Q  L  Q  N  L  I  P  K  S  W  D  F  H  P  R  Q  L  I  Y  G  A  V  S  H  F  S  W  D  *  I  Q  Y  L  L  *  P  F  *  P  L  *  V  F  L  L  I  L  L  N  *  E  L  W  V  W  *  W  L  R  M  *  *  F  T  F  R  T  G  L  F  L  K  C  L  V  G  S  M  C  F  S  M  D  L  V  W  L  C  M  L  L  K  G  L  V  W  S  Y  L  W  N  Q  R  Q  E  T  R  T  S  L  G  K  S  W  D  W  Q  W  A  S  Y  H  C  C  L  V  L  L  E  Y  W  A  T  L  H  L  G  K  T  L  K  I  *  S  L  Q  I  L  G  R  D  C  S  A  P  L  F  N  L  A  F  A  *  T  C  F  S  L  S  P  L  *  *  I  Q  S  M  K  *  W  K  G  D  S  G  </first_frame>
            <second_frame>  I  P  N  I  P  C  F  Q  E  D  S  K  R  A  R  E  K  I  Q  S  *  F  F  S  S  S  C  *  S  N  L  K  V  L  I  F  N  I  W  G  L  C  R  S  L  I  G  F  L  I  L  G  *  *  E  Y  G  V  *  E  R  *  S  K  F  I  F  S  C  F  E  Y  P  K  R  R  Y  T  T  S  W  Q  D  S  T  S  F  F  S  F  Q  D  F  C  *  C  F  H  S  H  S  W  S  W  S  S  W  S  S  L  H  L  *  E  N  W  M  G  Y  G  F  Y  H  A  L  L  S  C  L  S  Y  L  L  L  Y  D  A  F  G  L  F  K  A  *  D  *  I  P  H  K  S  C  K  N  F  I  F  W  *  F  G  V  C  C  V  W  T  C  W  *  I  V  C  *  S  Y  D  Y  S  I  S  S  W  F  L  R  *  L  L  D  F  C  G  *  Y  F  G  I  F  V  Q  L  F  N  C  K  T  *  S  Q  N  L  G  T  F  T  Q  G  S  L  Y  M  G  L  F  P  I  S  V  G  I  E  F  N  T  Y  S  D  P  F  S  P  F  K  Y  F  C  *  Y  C  *  I  R  S  Y  G  C  G  D  G  *  G  C  D  D  L  P  S  E  Q  A  C  S  *  N  V  W  W  V  Q  C  V  F  L  W  T  W  C  G  C  V  C  F  *  R  D  W  Y  G  L  T  S  G  I  R  D  K  R  Q  G  Q  V  W  E  N  L  G  I  G  N  G  L  H  I  I  A  V  W  C  F  W  S  I  G  L  L  C  I  W  G  R  H  *  R  Y  N  H  Y  K  S  W  A  G  I  A  Q  H  L  C  S  T  W  P  L  H  K  P  V  F  L  F  P  P  Y  D  E  S  S  L  *  S  N  G  K  E  I  L  G </second_frame>
            <third_frame>   Y  Q  I  Y  L  V  S  K  K  I  Q  K  E  Q  E  K  R  F  N  L  D  F  F  L  L  L  V  N  Q  I  L  K  F  *  F  L  I  S  G  V  C  V  E  V  *  L  D  S  *  F  W  D  N  K  S  M  G  F  K  K  D  E  A  S  S  S  S  H  V  L  S  I  P  R  E  D  T  P  L  L  G  K  I  Q  H  L  S  S  P  S  K  T  F  A  N  V  F  I  A  I  V  G  A  G  V  L  G  L  P  Y  T  F  K  R  T  G  W  V  M  G  S  I  M  L  F  S  V  A  F  L  T  Y  Y  C  M  M  L  L  V  Y  S  R  R  K  I  E  S  H  I  K  A  A  K  I  S  S  F  G  D  L  G  F  A  V  C  G  P  V  G  R  L  S  V  D  L  M  I  I  L  S  Q  A  G  F  C  V  S  Y  L  I  F  V  A  N  T  L  A  Y  L  F  N  Y  S  I  A  K  P  D  P  K  I  L  G  L  S  P  K  A  A  Y  I  W  G  C  F  P  F  Q  L  G  L  N  S  I  P  T  L  T  L  L  A  P  L  S  I  F  A  D  I  A  E  L  G  A  M  G  V  V  M  V  E  D  V  M  I  Y  L  Q  N  R  P  V  L  E  M  F  G  G  F  N  V  F  F  Y  G  L  G  V  A  V  Y  A  F  E  G  I  G  M  V  L  P  L  E  S  E  T  R  D  K  D  K  F  G  K  I  L  G  L  A  M  G  F  I  S  L  L  F  G  A  F  G  V  L  G  Y  F  A  F  G  E  D  T  K  D  I  I  T  T  N  L  G  Q  G  L  L  S  T  F  V  Q  L  G  L  C  I  N  L  F  F  S  F  P  L  M  M  N  P  V  Y  E  V  M  E  R  R  F  W   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0291P19.2" strand="-"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="65739" stop="64726"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1014</number_coding_nucleotides>
                  <number_encoded_amino_acids>338</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FWDNKSMGFKKDEASSSSHVLSIPREDTPLLGKIQHLSSPSKTFANVFIAIVGAGVLGLPYTFKRTGWVMGSIMLFSVAFLTYYCMMLLVYSRRKIESHIKAAKISSFGDLGFAVCGPVGRLSVDLMIILSQAGFCVSYLIFVANTLAYLFNYSIAKPDPKILGLSPKAAYIWGCFPFQLGLNSIPTLTLLAPLSIFADIAELGAMGVVMVEDVMIYLQNRPVLEMFGGFNVFFYGLGVAVYAFEGIGMVLPLESETRDKDKFGKILGLAMGFISLLFGAFGVLGYFAFGEDTKDIITTNLGQGLLSTFVQLGLCINLFFSFPLMMNPVYEVMERRFW</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="-" PGL_start="70401" PGL_stop="69722"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="70401" e_stop="69722"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.980"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.980">
            <gDNA_exon_boundary e_start="70401" e_stop="69722" e_length="680"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70401" stop="69821"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E585730" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70380" stop="69732"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E203164" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70374" stop="69733"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E619532" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70364" stop="69728"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E594590" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70350" stop="69901"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E278161" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70229" stop="69722"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E203165" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70162" stop="69726"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E407399" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70162" stop="69746"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E421191" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70109" stop="69735"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E595105" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CTCTTCACCGTCACATTTCAACCATGGCAACGCTTAAAGAGATCTTAACACGCCGCCCTATCTCAGCCACGATCCGTCTCACCGTCGATGCGGGAGCAGCTAAGCCCGGACCACCAGTAGGTCCGGCTCTCGGTCAGTACAAACTGAACTCCATGGCATTCTGTAAGGACTTCAATGCTAGGACCCAGAAGTTCAAGGCTGGAACACCAATGGCGGTGACTATCACCGCATTCAAGGATGGGACTTTCGATTTCATCGTTAAGTCTCCGTCAGTAACTTGGTACTTAAAGCAGGCCGCTGGAATTGATCTGGGAAGTGGCCGCCCGGGCCATGTAACAGCGTCGACGTTAACCCTAAAGCACGTTTATGAAATTGCGAAAATCAAGCAGAGTGACCCTTTTTGCCAGTACATGCCTTTGGAGTCAATTTGTAAGTCTATTATTGGGACGGCGAATTCTATGGGGATTAAAGTTCAGAAAGAGCTGGATTGATTGAATCTGTTGTGTGGGTATTTCTGTATCTTTCTCTTTTTCTTTGTAAGATTTTTTGTTGGAAATGAGAGTGATAAAGTTGTTTAAAGCAATGATTTTGTTGTGTAAGGAAGCATGATATGTTTTAGGGATGTTCTCCTAGCAATAAAGATAACTTTTTTTGAAGTTCATTAGAGATATCCAAGCAAA</gDNA_template>
            <first_frame> L  F  T  V  T  F  Q  P  W  Q  R  L  K  R  S  *  H  A  A  L  S  Q  P  R  S  V  S  P  S  M  R  E  Q  L  S  P  D  H  Q  *  V  R  L  S  V  S  T  N  *  T  P  W  H  S  V  R  T  S  M  L  G  P  R  S  S  R  L  E  H  Q  W  R  *  L  S  P  H  S  R  M  G  L  S  I  S  S  L  S  L  R  Q  *  L  G  T  *  S  R  P  L  E  L  I  W  E  V  A  A  R  A  M  *  Q  R  R  R  *  P  *  S  T  F  M  K  L  R  K  S  S  R  V  T  L  F  A  S  T  C  L  W  S  Q  F  V  S  L  L  L  G  R  R  I  L  W  G  L  K  F  R  K  S  W  I  D  *  I  C  C  V  G  I  S  V  S  F  S  F  S  L  *  D  F  L  L  E  M  R  V  I  K  L  F  K  A  M  I  L  L  C  K  E  A  *  Y  V  L  G  M  F  S  *  Q  *  R  *  L  F  L  K  F  I  R  D  I  Q  A   </first_frame>
            <second_frame>  S  S  P  S  H  F  N  H  G  N  A  *  R  D  L  N  T  P  P  Y  L  S  H  D  P  S  H  R  R  C  G  S  S  *  A  R  T  T  S  R  S  G  S  R  S  V  Q  T  E  L  H  G  I  L  *  G  L  Q  C  *  D  P  E  V  Q  G  W  N  T  N  G  G  D  Y  H  R  I  Q  G  W  D  F  R  F  H  R  *  V  S  V  S  N  L  V  L  K  A  G  R  W  N  *  S  G  K  W  P  P  G  P  C  N  S  V  D  V  N  P  K  A  R  L  *  N  C  E  N  Q  A  E  *  P  F  L  P  V  H  A  F  G  V  N  L  *  V  Y  Y  W  D  G  E  F  Y  G  D  *  S  S  E  R  A  G  L  I  E  S  V  V  W  V  F  L  Y  L  S  L  F  L  C  K  I  F  C  W  K  *  E  *  *  S  C  L  K  Q  *  F  C  C  V  R  K  H  D  M  F  *  G  C  S  P  S  N  K  D  N  F  F  *  S  S  L  E  I  S  K  Q  </second_frame>
            <third_frame>   L  H  R  H  I  S  T  M  A  T  L  K  E  I  L  T  R  R  P  I  S  A  T  I  R  L  T  V  D  A  G  A  A  K  P  G  P  P  V  G  P  A  L  G  Q  Y  K  L  N  S  M  A  F  C  K  D  F  N  A  R  T  Q  K  F  K  A  G  T  P  M  A  V  T  I  T  A  F  K  D  G  T  F  D  F  I  V  K  S  P  S  V  T  W  Y  L  K  Q  A  A  G  I  D  L  G  S  G  R  P  G  H  V  T  A  S  T  L  T  L  K  H  V  Y  E  I  A  K  I  K  Q  S  D  P  F  C  Q  Y  M  P  L  E  S  I  C  K  S  I  I  G  T  A  N  S  M  G  I  K  V  Q  K  E  L  D  *  L  N  L  L  C  G  Y  F  C  I  F  L  F  F  F  V  R  F  F  V  G  N  E  S  D  K  V  V  *  S  N  D  F  V  V  *  G  S  M  I  C  F  R  D  V  L  L  A  I  K  I  T  F  F  E  V  H  *  R  Y  P  S  K </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0291P19.2" strand="-"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="70399" stop="69911"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>486</number_coding_nucleotides>
                  <number_encoded_amino_acids>162</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LHRHISTMATLKEILTRRPISATIRLTVDAGAAKPGPPVGPALGQYKLNSMAFCKDFNARTQKFKAGTPMAVTITAFKDGTFDFIVKSPSVTWYLKQAAGIDLGSGRPGHVTASTLTLKHVYEIAKIKQSDPFCQYMPLESICKSIIGTANSMGIKVQKELD*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="-" PGL_start="74685" PGL_stop="71483"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="74685" e_stop="74254"/>
            <exon e_start="73528" e_stop="73334"/>
            <exon e_start="72958" e_stop="72753"/>
            <exon e_start="72011" e_stop="71483"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.953" acc_prob="0.985" e_score="0.965"/>
          <exon-intron don_prob="0.289" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="0.994"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.965">
            <gDNA_exon_boundary e_start="74685" e_stop="74254" e_length="432"/>
          </exon>
          <intron i_serial="1" don_prob="0.953" acc_prob="0.985">
            <gDNA_intron_boundary i_start="74253" i_stop="73529" i_length="725"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="73528" e_stop="73334" e_length="195"/>
          </exon>
          <intron i_serial="2" don_prob="0.289" acc_prob="1.000">
            <gDNA_intron_boundary i_start="73333" i_stop="72959" i_length="375"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="72958" e_stop="72753" e_length="206"/>
          </exon>
          <intron i_serial="3" don_prob="0.997" acc_prob="0.999">
            <gDNA_intron_boundary i_start="72752" i_stop="72012" i_length="741"/>
          </intron>
          <exon e_serial="4" e_score="0.994">
            <gDNA_exon_boundary e_start="72011" e_stop="71483" e_length="529"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="74685" stop="74254"/>
              <exon start="73528" stop="73334"/>
              <exon start="72958" stop="72871"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E577381" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="73528" stop="73334"/>
              <exon start="72958" stop="72753"/>
              <exon start="72011" stop="71870"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E359398" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72923" stop="72753"/>
              <exon start="72011" stop="71483"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E340998" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATAAAGTTTAAATCTTGGCATGTGGGTGACTTTGCTTCTTTGTCAATTTCAAAGAAGGGTCTGTAATACTCATTTTCTGCCTAAAAATGTGGGTTCTTGTGGTGTTTCTGACCTGGGATCAAGAAACAGTAACACAGCTGTCCATGTGAAGAAAGAAAAAAAATTTAATAATTAAACCATGAAAGCAAATGCACATTATTAAGGGATCTATTGATGGAGTGAATGAAAGAAATGATGGCTCCAGGCACCAATATGTCACCCTGTAATGGGGAAATTGAGAATGGGTTCTGTAAAGGAAATATGTCAGCAATTGAAGAAAATCAGGAAGTGTCTGATGGTTTGAGTCAACCAAATGCAGGGAAGCCACCAAGAAACCATCCAGGGATGAGGCATTGTATCAGCCAAGCAAATTTGGGAGCTACTTCTGCATTG : GAACCAAATACAGTAATGCTTGGTCTCAAATCACCATCAAGTGATAATTGTGCATATGTGCCCATCTTTCGCTCAGGAAGCTATTCTGAGATGGGACCCAAACAGTACATGGAAGATGAACATATCCGTATTGATAATCTCCGTGAACAAGTTGATGACTCCAAAGGTCTTCTTTCACAAGGAGCATATTATGGT : GTGTTTGATGGGCACGGTGGCATTGATGCTGCATCATTTACTCAAAATAATCTCCTTAATTTTATTTTAGAGGATTCCCATTTCCCATCAATGGTTAAAAAAGCTGTCAGGAATGCTTTCCAGAAAGCCGATAATACGTTAGCAGATACAAAGTCTCTAGATAGTTCCTCTGGAACAACTGCTCTGATTGCACTTATTTTAGGAAG : GACCATGCTCATAGCTAATGCTGGGGACTCTCGAGCTGTATTAGGGAAGCGTGGAAGAGCAATTGAATTGTCAAAAGACCACAAACCAAATGCTACTTCCGAGAAATTAAGAATTGAAAAACTAGGGGGCGTCATTTTTGATGGCTACCTCAATGGCCAACTGTCAGTTGCACGAGCTCTGGGTGACTGGCACATAAAGAGTGCCAAAGGTTCAAAGGGCCTGTTGATCTCGGAGCCAGAGTTTGAAGAGGTGGTCCTGTCAGAAGAGGATGAATTCCTGATAATTGGCTGCGATGGTTTATGGGATGTCATGAGTAGCCAATATGCAGTAACAATCGTAAGAAAGGAGCTCATGCTGCATAATGATCCTGAAAAATGCTCAAAATTTCTTGTCAAGGAGGCACTGAAGCGTAACTGTTGTGATAATCTAACCGTTCTTGTAATCTGCTTCTCTCATGATCCACCACCTCGAATTGAAATACCAAAAACTACAAGAAGGAGAAGTATATCAGCTGAAGGACTGGATCTT</gDNA_template>
            <first_frame> I  K  F  K  S  W  H  V  G  D  F  A  S  L  S  I  S  K  K  G  L  *  Y  S  F  S  A  *  K  C  G  F  L  W  C  F  *  P  G  I  K  K  Q  *  H  S  C  P  C  E  E  R  K  K  I  *  *  L  N  H  E  S  K  C  T  L  L  R  D  L  L  M  E  *  M  K  E  M  M  A  P  G  T  N  M  S  P  C  N  G  E  I  E  N  G  F  C  K  G  N  M  S  A  I  E  E  N  Q  E  V  S  D  G  L  S  Q  P  N  A  G  K  P  P  R  N  H  P  G  M  R  H  C  I  S  Q  A  N  L  G  A  T  S  A  L  :  E  P  N  T  V  M  L  G  L  K  S  P  S  S  D  N  C  A  Y  V  P  I  F  R  S  G  S  Y  S  E  M  G  P  K  Q  Y  M  E  D  E  H  I  R  I  D  N  L  R  E  Q  V  D  D  S  K  G  L  L  S  Q  G  A  Y  Y  G  :  V  F  D  G  H  G  G  I  D  A  A  S  F  T  Q  N  N  L  L  N  F  I  L  E  D  S  H  F  P  S  M  V  K  K  A  V  R  N  A  F  Q  K  A  D  N  T  L  A  D  T  K  S  L  D  S  S  S  G  T  T  A  L  I  A  L  I  L  G  R :   T  M  L  I  A  N  A  G  D  S  R  A  V  L  G  K  R  G  R  A  I  E  L  S  K  D  H  K  P  N  A  T  S  E  K  L  R  I  E  K  L  G  G  V  I  F  D  G  Y  L  N  G  Q  L  S  V  A  R  A  L  G  D  W  H  I  K  S  A  K  G  S  K  G  L  L  I  S  E  P  E  F  E  E  V  V  L  S  E  E  D  E  F  L  I  I  G  C  D  G  L  W  D  V  M  S  S  Q  Y  A  V  T  I  V  R  K  E  L  M  L  H  N  D  P  E  K  C  S  K  F  L  V  K  E  A  L  K  R  N  C  C  D  N  L  T  V  L  V  I  C  F  S  H  D  P  P  P  R  I  E  I  P  K  T  T  R  R  R  S  I  S  A  E  G  L  D  L </first_frame>
            <second_frame>  *  S  L  N  L  G  M  W  V  T  L  L  L  C  Q  F  Q  R  R  V  C  N  T  H  F  L  P  K  N  V  G  S  C  G  V  S  D  L  G  S  R  N  S  N  T  A  V  H  V  K  K  E  K  K  F  N  N  *  T  M  K  A  N  A  H  Y  *  G  I  Y  *  W  S  E  *  K  K  *  W  L  Q  A  P  I  C  H  P  V  M  G  K  L  R  M  G  S  V  K  E  I  C  Q  Q  L  K  K  I  R  K  C  L  M  V  *  V  N  Q  M  Q  G  S  H  Q  E  T  I  Q  G  *  G  I  V  S  A  K  Q  I  W  E  L  L  L  H  W :   N  Q  I  Q  *  C  L  V  S  N  H  H  Q  V  I  I  V  H  M  C  P  S  F  A  Q  E  A  I  L  R  W  D  P  N  S  T  W  K  M  N  I  S  V  L  I  I  S  V  N  K  L  M  T  P  K  V  F  F  H  K  E  H  I  M  V :   C  L  M  G  T  V  A  L  M  L  H  H  L  L  K  I  I  S  L  I  L  F  *  R  I  P  I  S  H  Q  W  L  K  K  L  S  G  M  L  S  R  K  P  I  I  R  *  Q  I  Q  S  L  *  I  V  P  L  E  Q  L  L  *  L  H  L  F  *  E   : G  P  C  S  *  L  M  L  G  T  L  E  L  Y  *  G  S  V  E  E  Q  L  N  C  Q  K  T  T  N  Q  M  L  L  P  R  N  *  E  L  K  N  *  G  A  S  F  L  M  A  T  S  M  A  N  C  Q  L  H  E  L  W  V  T  G  T  *  R  V  P  K  V  Q  R  A  C  *  S  R  S  Q  S  L  K  R  W  S  C  Q  K  R  M  N  S  *  *  L  A  A  M  V  Y  G  M  S  *  V  A  N  M  Q  *  Q  S  *  E  R  S  S  C  C  I  M  I  L  K  N  A  Q  N  F  L  S  R  R  H  *  S  V  T  V  V  I  I  *  P  F  L  *  S  A  S  L  M  I  H  H  L  E  L  K  Y  Q  K  L  Q  E  G  E  V  Y  Q  L  K  D  W  I   </second_frame>
            <third_frame>   K  V  *  I  L  A  C  G  *  L  C  F  F  V  N  F  K  E  G  S  V  I  L  I  F  C  L  K  M  W  V  L  V  V  F  L  T  W  D  Q  E  T  V  T  Q  L  S  M  *  R  K  K  K  N  L  I  I  K  P  *  K  Q  M  H  I  I  K  G  S  I  D  G  V  N  E  R  N  D  G  S  R  H  Q  Y  V  T  L  *  W  G  N  *  E  W  V  L  *  R  K  Y  V  S  N  *  R  K  S  G  S  V  *  W  F  E  S  T  K  C  R  E  A  T  K  K  P  S  R  D  E  A  L  Y  Q  P  S  K  F  G  S  Y  F  C  I   : G  T  K  Y  S  N  A  W  S  Q  I  T  I  K  *  *  L  C  I  C  A  H  L  S  L  R  K  L  F  *  D  G  T  Q  T  V  H  G  R  *  T  Y  P  Y  *  *  S  P  *  T  S  *  *  L  Q  R  S  S  F  T  R  S  I  L  W   : C  V  *  W  A  R  W  H  *  C  C  I  I  Y  S  K  *  S  P  *  F  Y  F  R  G  F  P  F  P  I  N  G  *  K  S  C  Q  E  C  F  P  E  S  R  *  Y  V  S  R  Y  K  V  S  R  *  F  L  W  N  N  C  S  D  C  T  Y  F  R  K  :  D  H  A  H  S  *  C  W  G  L  S  S  C  I  R  E  A  W  K  S  N  *  I  V  K  R  P  Q  T  K  C  Y  F  R  E  I  K  N  *  K  T  R  G  R  H  F  *  W  L  P  Q  W  P  T  V  S  C  T  S  S  G  *  L  A  H  K  E  C  Q  R  F  K  G  P  V  D  L  G  A  R  V  *  R  G  G  P  V  R  R  G  *  I  P  D  N  W  L  R  W  F  M  G  C  H  E  *  P  I  C  S  N  N  R  K  K  G  A  H  A  A  *  *  S  *  K  M  L  K  I  S  C  Q  G  G  T  E  A  *  L  L  *  *  S  N  R  S  C  N  L  L  L  S  *  S  T  T  S  N  *  N  T  K  N  Y  K  K  E  K  Y  I  S  *  R  T  G  S  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0291P19.2" strand="-"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="74463" stop="74254"/>
                    <exon start="73528" stop="73334"/>
                    <exon start="72958" stop="72753"/>
                    <exon start="72011" stop="71483"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1140</number_coding_nucleotides>
                  <number_encoded_amino_acids>380</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>MKEMMAPGTNMSPCNGEIENGFCKGNMSAIEENQEVSDGLSQPNAGKPPRNHPGMRHCISQANLGATSALEPNTVMLGLKSPSSDNCAYVPIFRSGSYSEMGPKQYMEDEHIRIDNLREQVDDSKGLLSQGAYYGVFDGHGGIDAASFTQNNLLNFILEDSHFPSMVKKAVRNAFQKADNTLADTKSLDSSSGTTALIALILGRTMLIANAGDSRAVLGKRGRAIELSKDHKPNATSEKLRIEKLGGVIFDGYLNGQLSVARALGDWHIKSAKGSKGLLISEPEFEEVVLSEEDEFLIIGCDGLWDVMSSQYAVTIVRKELMLHNDPEKCSKFLVKEALKRNCCDNLTVLVICFSHDPPPRIEIPKTTRRRSISAEGLDL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="15" PGL_strand="+" PGL_start="80361" PGL_stop="81381"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="80361" e_stop="80376"/>
            <exon e_start="80462" e_stop="80739"/>
            <exon e_start="80913" e_stop="80944"/>
            <exon e_start="81030" e_stop="81381"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.984" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.989" acc_prob="0.988" e_score="0.978"/>
          <exon-intron don_prob="0.961" acc_prob="0.958" e_score="0.969"/>
          <exon-only e_score="0.991"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="80361" e_stop="80376" e_length="16"/>
          </exon>
          <intron i_serial="1" don_prob="0.984" acc_prob="1.000">
            <gDNA_intron_boundary i_start="80377" i_stop="80461" i_length="85"/>
          </intron>
          <exon e_serial="2" e_score="0.978">
            <gDNA_exon_boundary e_start="80462" e_stop="80739" e_length="278"/>
          </exon>
          <intron i_serial="2" don_prob="0.989" acc_prob="0.988">
            <gDNA_intron_boundary i_start="80740" i_stop="80912" i_length="173"/>
          </intron>
          <exon e_serial="3" e_score="0.969">
            <gDNA_exon_boundary e_start="80913" e_stop="80944" e_length="32"/>
          </exon>
          <intron i_serial="3" don_prob="0.961" acc_prob="0.958">
            <gDNA_intron_boundary i_start="80945" i_stop="81029" i_length="85"/>
          </intron>
          <exon e_serial="4" e_score="0.991">
            <gDNA_exon_boundary e_start="81030" e_stop="81381" e_length="352"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80361" stop="80376"/>
              <exon start="80462" stop="80739"/>
              <exon start="80913" stop="80944"/>
              <exon start="81030" stop="81381"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E560446" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CCTAATCACAGCAGGA : GTTTATGATGCAGCCATAGGTGACATAGCAATTACAACTAATCGAACAAAAATGGTTGACTTCACTCAACCATACATTGAATCTGGGTTAGTTGTAGTGGCACCAGTTAAGGAGCAGAATTCTAATGCTTGGGCTTTTCTCAGTCCATTTACTCCTAAGATGTGGTGTGTCACTGGTGTTTTTTTCTTAATTGTGGGCACTGTAATTTGGATTTTGGAACACAGATTGAATGATGAATTTCGTGGACCTCCGAGTAAACAGATTGTCACTGTTTTATG : GTTCAGCTTTTCAACTCTCTTTACTGCCCAGA : GAGAAAACACTGTCAGCACCTTTGGCCGTATTGTCCTTCTTATATGGCTATTTGTGGTTTTGATAATAAACTCAAGCTATACTGCCAGTCTCACCTCAATTCTTACAGTGCAGAAACTTTCTTCCCCAATTACCGGAATTGAAAGTTTAGTAAATACAAAGGAACCCATTGGTTATCAGTGGGGTTCATTTGCCCGTAACTATCTGATTCAAGAACTTCGCATTGATGAATCTAGACTTGTTCCTCTTAACCTCCCTGAAGATTATGCTAAAGCTTTAAAAGATGGTCCTAGCCGTGGTGGTGTTGCAGCAGTGGTAGATGAGCGTGCTTATATGGAGCTTTTCCTCTCATC</gDNA_template>
            <first_frame> P  N  H  S  R   : S  L  *  C  S  H  R  *  H  S  N  Y  N  *  S  N  K  N  G  *  L  H  S  T  I  H  *  I  W  V  S  C  S  G  T  S  *  G  A  E  F  *  C  L  G  F  S  Q  S  I  Y  S  *  D  V  V  C  H  W  C  F  F  L  N  C  G  H  C  N  L  D  F  G  T  Q  I  E  *  *  I  S  W  T  S  E  *  T  D  C  H  C  F  M  :  V  Q  L  F  N  S  L  Y  C  P  E :   R  K  H  C  Q  H  L  W  P  Y  C  P  S  Y  M  A  I  C  G  F  D  N  K  L  K  L  Y  C  Q  S  H  L  N  S  Y  S  A  E  T  F  F  P  N  Y  R  N  *  K  F  S  K  Y  K  G  T  H  W  L  S  V  G  F  I  C  P  *  L  S  D  S  R  T  S  H  *  *  I  *  T  C  S  S  *  P  P  *  R  L  C  *  S  F  K  R  W  S  *  P  W  W  C  C  S  S  G  R  *  A  C  L  Y  G  A  F  P  L  I </first_frame>
            <second_frame>  L  I  T  A  G  :  V  Y  D  A  A  I  G  D  I  A  I  T  T  N  R  T  K  M  V  D  F  T  Q  P  Y  I  E  S  G  L  V  V  V  A  P  V  K  E  Q  N  S  N  A  W  A  F  L  S  P  F  T  P  K  M  W  C  V  T  G  V  F  F  L  I  V  G  T  V  I  W  I  L  E  H  R  L  N  D  E  F  R  G  P  P  S  K  Q  I  V  T  V  L  W :   F  S  F  S  T  L  F  T  A  Q   : R  E  N  T  V  S  T  F  G  R  I  V  L  L  I  W  L  F  V  V  L  I  I  N  S  S  Y  T  A  S  L  T  S  I  L  T  V  Q  K  L  S  S  P  I  T  G  I  E  S  L  V  N  T  K  E  P  I  G  Y  Q  W  G  S  F  A  R  N  Y  L  I  Q  E  L  R  I  D  E  S  R  L  V  P  L  N  L  P  E  D  Y  A  K  A  L  K  D  G  P  S  R  G  G  V  A  A  V  V  D  E  R  A  Y  M  E  L  F  L  S   </second_frame>
            <third_frame>   *  S  Q  Q  E :   F  M  M  Q  P  *  V  T  *  Q  L  Q  L  I  E  Q  K  W  L  T  S  L  N  H  T  L  N  L  G  *  L  *  W  H  Q  L  R  S  R  I  L  M  L  G  L  F  S  V  H  L  L  L  R  C  G  V  S  L  V  F  F  S  *  L  W  A  L  *  F  G  F  W  N  T  D  *  M  M  N  F  V  D  L  R  V  N  R  L  S  L  F  Y   : G  S  A  F  Q  L  S  L  L  P  R  :  E  K  T  L  S  A  P  L  A  V  L  S  F  L  Y  G  Y  L  W  F  *  *  *  T  Q  A  I  L  P  V  S  P  Q  F  L  Q  C  R  N  F  L  P  Q  L  P  E  L  K  V  *  *  I  Q  R  N  P  L  V  I  S  G  V  H  L  P  V  T  I  *  F  K  N  F  A  L  M  N  L  D  L  F  L  L  T  S  L  K  I  M  L  K  L  *  K  M  V  L  A  V  V  V  L  Q  Q  W  *  M  S  V  L  I  W  S  F  S  S  H  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0291P19.2" strand="+"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="80362" stop="80376"/>
                    <exon start="80462" stop="80739"/>
                    <exon start="80913" stop="80944"/>
                    <exon start="81030" stop="81379"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>675</number_coding_nucleotides>
                  <number_encoded_amino_acids>225</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LITAGVYDAAIGDIAITTNRTKMVDFTQPYIESGLVVVAPVKEQNSNAWAFLSPFTPKMWCVTGVFFLIVGTVIWILEHRLNDEFRGPPSKQIVTVLWFSFSTLFTAQRENTVSTFGRIVLLIWLFVVLIINSSYTASLTSILTVQKLSSPITGIESLVNTKEPIGYQWGSFARNYLIQELRIDESRLVPLNLPEDYAKALKDGPSRGGVAAVVDERAYMELFLS</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="16" PGL_strand="-" PGL_start="87792" PGL_stop="82912"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="87792" e_stop="86403"/>
            <exon e_start="85600" e_stop="85428"/>
            <exon e_start="85114" e_stop="84868"/>
            <exon e_start="83787" e_stop="83484"/>
            <exon e_start="83271" e_stop="82912"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.973" acc_prob="0.933" e_score="0.996"/>
          <exon-intron don_prob="0.000" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.661" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.967" e_score="1.000"/>
          <exon-only e_score="0.903"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.996">
            <gDNA_exon_boundary e_start="87792" e_stop="86403" e_length="1390"/>
          </exon>
          <intron i_serial="1" don_prob="0.973" acc_prob="0.933">
            <gDNA_intron_boundary i_start="86402" i_stop="85601" i_length="802"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="85600" e_stop="85428" e_length="173"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.999">
            <gDNA_intron_boundary i_start="85427" i_stop="85115" i_length="313"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="85114" e_stop="84868" e_length="247"/>
          </exon>
          <intron i_serial="3" don_prob="0.997" acc_prob="0.661">
            <gDNA_intron_boundary i_start="84867" i_stop="83788" i_length="1080"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="83787" e_stop="83484" e_length="304"/>
          </exon>
          <intron i_serial="4" don_prob="1.000" acc_prob="0.967">
            <gDNA_intron_boundary i_start="83483" i_stop="83272" i_length="212"/>
          </intron>
          <exon e_serial="5" e_score="0.903">
            <gDNA_exon_boundary e_start="83271" e_stop="82912" e_length="360"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="87792" stop="87012"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E348691" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="87043" stop="86536"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E288755" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="86700" stop="86403"/>
              <exon start="85600" stop="85428"/>
              <exon start="85114" stop="84868"/>
              <exon start="83787" stop="83666"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E707816" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="85593" stop="85428"/>
              <exon start="85114" stop="84868"/>
              <exon start="83787" stop="83580"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E345231" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="85593" stop="85428"/>
              <exon start="85114" stop="84868"/>
              <exon start="83787" stop="83615"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E342874" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="85475" stop="85428"/>
              <exon start="85114" stop="84868"/>
              <exon start="83787" stop="83484"/>
              <exon start="83271" stop="83200"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E431775" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="85475" stop="85428"/>
              <exon start="85114" stop="84868"/>
              <exon start="83787" stop="83525"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E465052" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="84927" stop="84868"/>
              <exon start="83787" stop="83484"/>
              <exon start="83271" stop="83023"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E331854" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="84901" stop="84868"/>
              <exon start="83787" stop="83484"/>
              <exon start="83271" stop="82912"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E431776" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="16" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTATGAAGAGTATTGATGAGTATATTAGTTCAACTCCACAAATAGCTGAGGACGGCGGAATTGTTCTGGGTTCTAAAAGAACTACTGCATTTCTTATTGATGCTAAGACTGGACGATTGATTTACACATATAGTATGCCTAGCTCTCCAGCAACTCAGGACAACGACACTGCTTTTCATCATAATGGCACCATTGAGGAAAAGAGTCTTCCCAGCTACACGCTTTACATCACCAGGACAGACTATGCATTAACGTCCTTTATTCCAAACTCAGACAAAGTGTTGTGGAACATGACGGTTGCTGAAATAGGGGCTGCTGCTCTTTGCAAAGTTGATGATGCATTAAGTGGGGATATTATGGAGTCTGACAAATCTGAACCTGATGTCCATTTCAATATGCCATTGCCATGTCAGTCAAGGGCCCTTATCTACAGACGCCGAGGTCATGATAACAAGATGCTCCCAGAGGCAGATAATCACGGTATGCTGCCAATTCCTACTTCACAACCAAATGTTGATAATGCAGCTACGCCCGTGCCCGACAAGAATGTAAACACCTTCCACTTAAAAGATATTATTAAAAAAACTATGCTTGTCATATTGACGGTGTTCATAATTTTTTTCACCAAAAACATAATGTTACAAGATGCTAAAAGTCCATTTAAAAAAGGAATATCAAAGTGCTCTGAAAGATTGACCATGCCAATTCACAGTATTTTAGCTACTCTTGTGGGAGCTTTTACACATAATCGTGATTTAGTAGCTGAACTCAATGGGAACCTACATTCGCCAAATGTACCTTCAAAAAGGAAGAAGTCTCGGAAGTCTGGAAAGAATGGGAGCAATGGCATTAAAAGTGATAAAGACACCTCATCTGGTACTGGACTTAAATATGCAGACGTGGATGCTGATAATAAACTGTTGAACTTTCTTCAACCAAGTATATGTACCAAAGGTGGACGCTCTATTGGTAAATTGTTTGTCTCCAGTTCAGAGATTGCTAAAGGGAGCAATGGTACAGTTGTATTTGAAGGAATTTATGAAGGCCGTGCAGTTGCTGTTAAAAGACTTGTCAGGGCACATCATGATATTGCCTTCAAAGAGATACAGAATCTTATTGCATCTGATCGACATCCAAATATCGTTCGGTGGTATGGTGTGGAACAAGACCAAGATTTTGTTTATCTTGCTTTGGAACGCTGCATTTGCAGCTTGAGTGACCTTATTCAGATTTATGCTGACACTTCAGAAAATGCTTGTCCTAACCAGAACTTGGATGGAGAATCTATGAAGCATAGACGTTATTTGGACAATTTGAAGGGTATTATTCTGGATACTGACCTAATGAATGAAAATGGTTGTCCTTCACCCCTGTTGCTCAAATTGATGAG : GGATGTGGTTTCTGGTCTTGTGCATCTTCATGATCTGGGGATCATTCATCGAGACCTGAAGCCCCAAAATGTTCTGATAACTAAGGAAAAATTCTTATGTGCTAAGCTTTCTGATATGGGAATCAGCAAGCGCCTCATTGGAGATATGTCTTCATTGGGTCATCGCCCAACAG : GTTATGGAAGTTCTGGATGGCAAGCTCCTGAACAACTTCTTCATGGACGTCAAACACGTGCTATTGATATGTTCAGTCTGGGGTCTGTTCTGTTTTTCTGCATGACTGGTGGTCGTCATCCCTTTGGAAGTCCTCTTGAGCGTGACATTAACATTACAAAGAATAAAATGGATCTTTTCTTGTCGGAACACATCCCTGAAGCTGTGGATCTCTTTTCTCGTTTGTTAGATCCCATTGCTGAACTGAG : ACCAAAGGCAGTGAAGGTGCTTGCTCATCCTTTCTTTTGGACTGCTGAGATGCGACTGTCATTTCTTCGTGATTCAAGCGACAGGGTGGAACTTGAAGATAGGGAGACTTCTTCTGATCTTCTGAAAGCATTAGAAGGTACAGCGCCTGTGGCTTTGGGTGGAAAATGGGATGAGAAGATGGAACCTCCTTTCATAAAAAATATTGGCCATTACAGGCGATATAGATTTGACAGTATTCGTGATTTGCTGCGTGTGATGCGGAACAAGCTAAATCATTATAGAGAGCTTCCCACCGAAATTCAG : GAAATTATAGGAACCGTTCCAGAAGGATTTGATGGCTATTTTAGGAGGCGGTTTCCGCGGCTACTAATTGAAGTGTATAAAGTGATGTCAGAATACTGTAAAGATGAAGCCTGTTTTCAGAAGTACTTCACAAGCAGTGTACTTTAGGCTCCTCCAGATAGTAGCTTAATCTTGTTCCATTCTTACATTACATGTATGATGTAACATGTATTGTAAATTGTAATATACACTATGTAAATATGCCTGTGCCGGGGAGGTACCAGAAAGCTGTCCGAATACACCACTGTTGTTGGAAACAAAAATAATGTATATATGAAACCAAATGTGTAATCTTATTAAAGTATGTTTACCAACATTTCT</gDNA_template>
            <first_frame> L  *  R  V  L  M  S  I  L  V  Q  L  H  K  *  L  R  T  A  E  L  F  W  V  L  K  E  L  L  H  F  L  L  M  L  R  L  D  D  *  F  T  H  I  V  C  L  A  L  Q  Q  L  R  T  T  T  L  L  F  I  I  M  A  P  L  R  K  R  V  F  P  A  T  R  F  T  S  P  G  Q  T  M  H  *  R  P  L  F  Q  T  Q  T  K  C  C  G  T  *  R  L  L  K  *  G  L  L  L  F  A  K  L  M  M  H  *  V  G  I  L  W  S  L  T  N  L  N  L  M  S  I  S  I  C  H  C  H  V  S  Q  G  P  L  S  T  D  A  E  V  M  I  T  R  C  S  Q  R  Q  I  I  T  V  C  C  Q  F  L  L  H  N  Q  M  L  I  M  Q  L  R  P  C  P  T  R  M  *  T  P  S  T  *  K  I  L  L  K  K  L  C  L  S  Y  *  R  C  S  *  F  F  S  P  K  T  *  C  Y  K  M  L  K  V  H  L  K  K  E  Y  Q  S  A  L  K  D  *  P  C  Q  F  T  V  F  *  L  L  L  W  E  L  L  H  I  I  V  I  *  *  L  N  S  M  G  T  Y  I  R  Q  M  Y  L  Q  K  G  R  S  L  G  S  L  E  R  M  G  A  M  A  L  K  V  I  K  T  P  H  L  V  L  D  L  N  M  Q  T  W  M  L  I  I  N  C  *  T  F  F  N  Q  V  Y  V  P  K  V  D  A  L  L  V  N  C  L  S  P  V  Q  R  L  L  K  G  A  M  V  Q  L  Y  L  K  E  F  M  K  A  V  Q  L  L  L  K  D  L  S  G  H  I  M  I  L  P  S  K  R  Y  R  I  L  L  H  L  I  D  I  Q  I  S  F  G  G  M  V  W  N  K  T  K  I  L  F  I  L  L  W  N  A  A  F  A  A  *  V  T  L  F  R  F  M  L  T  L  Q  K  M  L  V  L  T  R  T  W  M  E  N  L  *  S  I  D  V  I  W  T  I  *  R  V  L  F  W  I  L  T  *  *  M  K  M  V  V  L  H  P  C  C  S  N  *  *   : G  M  W  F  L  V  L  C  I  F  M  I  W  G  S  F  I  E  T  *  S  P  K  M  F  *  *  L  R  K  N  S  Y  V  L  S  F  L  I  W  E  S  A  S  A  S  L  E  I  C  L  H  W  V  I  A  Q  Q  :  V  M  E  V  L  D  G  K  L  L  N  N  F  F  M  D  V  K  H  V  L  L  I  C  S  V  W  G  L  F  C  F  S  A  *  L  V  V  V  I  P  L  E  V  L  L  S  V  T  L  T  L  Q  R  I  K  W  I  F  S  C  R  N  T  S  L  K  L  W  I  S  F  L  V  C  *  I  P  L  L  N  *   : D  Q  R  Q  *  R  C  L  L  I  L  S  F  G  L  L  R  C  D  C  H  F  F  V  I  Q  A  T  G  W  N  L  K  I  G  R  L  L  L  I  F  *  K  H  *  K  V  Q  R  L  W  L  W  V  E  N  G  M  R  R  W  N  L  L  S  *  K  I  L  A  I  T  G  D  I  D  L  T  V  F  V  I  C  C  V  *  C  G  T  S  *  I  I  I  E  S  F  P  P  K  F  R :   K  L  *  E  P  F  Q  K  D  L  M  A  I  L  G  G  G  F  R  G  Y  *  L  K  C  I  K  *  C  Q  N  T  V  K  M  K  P  V  F  R  S  T  S  Q  A  V  Y  F  R  L  L  Q  I  V  A  *  S  C  S  I  L  T  L  H  V  *  C  N  M  Y  C  K  L  *  Y  T  L  C  K  Y  A  C  A  G  E  V  P  E  S  C  P  N  T  P  L  L  L  E  T  K  I  M  Y  I  *  N  Q  M  C  N  L  I  K  V  C  L  P  T  F   </first_frame>
            <second_frame>  Y  E  E  Y  *  *  V  Y  *  F  N  S  T  N  S  *  G  R  R  N  C  S  G  F  *  K  N  Y  C  I  S  Y  *  C  *  D  W  T  I  D  L  H  I  *  Y  A  *  L  S  S  N  S  G  Q  R  H  C  F  S  S  *  W  H  H  *  G  K  E  S  S  Q  L  H  A  L  H  H  Q  D  R  L  C  I  N  V  L  Y  S  K  L  R  Q  S  V  V  E  H  D  G  C  *  N  R  G  C  C  S  L  Q  S  *  *  C  I  K  W  G  Y  Y  G  V  *  Q  I  *  T  *  C  P  F  Q  Y  A  I  A  M  S  V  K  G  P  Y  L  Q  T  P  R  S  *  *  Q  D  A  P  R  G  R  *  S  R  Y  A  A  N  S  Y  F  T  T  K  C  *  *  C  S  Y  A  R  A  R  Q  E  C  K  H  L  P  L  K  R  Y  Y  *  K  N  Y  A  C  H  I  D  G  V  H  N  F  F  H  Q  K  H  N  V  T  R  C  *  K  S  I  *  K  R  N  I  K  V  L  *  K  I  D  H  A  N  S  Q  Y  F  S  Y  S  C  G  S  F  Y  T  *  S  *  F  S  S  *  T  Q  W  E  P  T  F  A  K  C  T  F  K  K  E  E  V  S  E  V  W  K  E  W  E  Q  W  H  *  K  *  *  R  H  L  I  W  Y  W  T  *  I  C  R  R  G  C  *  *  *  T  V  E  L  S  S  T  K  Y  M  Y  Q  R  W  T  L  Y  W  *  I  V  C  L  Q  F  R  D  C  *  R  E  Q  W  Y  S  C  I  *  R  N  L  *  R  P  C  S  C  C  *  K  T  C  Q  G  T  S  *  Y  C  L  Q  R  D  T  E  S  Y  C  I  *  S  T  S  K  Y  R  S  V  V  W  C  G  T  R  P  R  F  C  L  S  C  F  G  T  L  H  L  Q  L  E  *  P  Y  S  D  L  C  *  H  F  R  K  C  L  S  *  P  E  L  G  W  R  I  Y  E  A  *  T  L  F  G  Q  F  E  G  Y  Y  S  G  Y  *  P  N  E  *  K  W  L  S  F  T  P  V  A  Q  I  D  E  :  G  C  G  F  W  S  C  A  S  S  *  S  G  D  H  S  S  R  P  E  A  P  K  C  S  D  N  *  G  K  I  L  M  C  *  A  F  *  Y  G  N  Q  Q  A  P  H  W  R  Y  V  F  I  G  S  S  P  N  R :   L  W  K  F  W  M  A  S  S  *  T  T  S  S  W  T  S  N  T  C  Y  *  Y  V  Q  S  G  V  C  S  V  F  L  H  D  W  W  S  S  S  L  W  K  S  S  *  A  *  H  *  H  Y  K  E  *  N  G  S  F  L  V  G  T  H  P  *  S  C  G  S  L  F  S  F  V  R  S  H  C  *  T  E  :  T  K  G  S  E  G  A  C  S  S  F  L  L  D  C  *  D  A  T  V  I  S  S  *  F  K  R  Q  G  G  T  *  R  *  G  D  F  F  *  S  S  E  S  I  R  R  Y  S  A  C  G  F  G  W  K  M  G  *  E  D  G  T  S  F  H  K  K  Y  W  P  L  Q  A  I  *  I  *  Q  Y  S  *  F  A  A  C  D  A  E  Q  A  K  S  L  *  R  A  S  H  R  N  S   : G  N  Y  R  N  R  S  R  R  I  *  W  L  F  *  E  A  V  S  A  A  T  N  *  S  V  *  S  D  V  R  I  L  *  R  *  S  L  F  S  E  V  L  H  K  Q  C  T  L  G  S  S  R  *  *  L  N  L  V  P  F  L  H  Y  M  Y  D  V  T  C  I  V  N  C  N  I  H  Y  V  N  M  P  V  P  G  R  Y  Q  K  A  V  R  I  H  H  C  C  W  K  Q  K  *  C  I  Y  E  T  K  C  V  I  L  L  K  Y  V  Y  Q  H  F  </second_frame>
            <third_frame>   M  K  S  I  D  E  Y  I  S  S  T  P  Q  I  A  E  D  G  G  I  V  L  G  S  K  R  T  T  A  F  L  I  D  A  K  T  G  R  L  I  Y  T  Y  S  M  P  S  S  P  A  T  Q  D  N  D  T  A  F  H  H  N  G  T  I  E  E  K  S  L  P  S  Y  T  L  Y  I  T  R  T  D  Y  A  L  T  S  F  I  P  N  S  D  K  V  L  W  N  M  T  V  A  E  I  G  A  A  A  L  C  K  V  D  D  A  L  S  G  D  I  M  E  S  D  K  S  E  P  D  V  H  F  N  M  P  L  P  C  Q  S  R  A  L  I  Y  R  R  R  G  H  D  N  K  M  L  P  E  A  D  N  H  G  M  L  P  I  P  T  S  Q  P  N  V  D  N  A  A  T  P  V  P  D  K  N  V  N  T  F  H  L  K  D  I  I  K  K  T  M  L  V  I  L  T  V  F  I  I  F  F  T  K  N  I  M  L  Q  D  A  K  S  P  F  K  K  G  I  S  K  C  S  E  R  L  T  M  P  I  H  S  I  L  A  T  L  V  G  A  F  T  H  N  R  D  L  V  A  E  L  N  G  N  L  H  S  P  N  V  P  S  K  R  K  K  S  R  K  S  G  K  N  G  S  N  G  I  K  S  D  K  D  T  S  S  G  T  G  L  K  Y  A  D  V  D  A  D  N  K  L  L  N  F  L  Q  P  S  I  C  T  K  G  G  R  S  I  G  K  L  F  V  S  S  S  E  I  A  K  G  S  N  G  T  V  V  F  E  G  I  Y  E  G  R  A  V  A  V  K  R  L  V  R  A  H  H  D  I  A  F  K  E  I  Q  N  L  I  A  S  D  R  H  P  N  I  V  R  W  Y  G  V  E  Q  D  Q  D  F  V  Y  L  A  L  E  R  C  I  C  S  L  S  D  L  I  Q  I  Y  A  D  T  S  E  N  A  C  P  N  Q  N  L  D  G  E  S  M  K  H  R  R  Y  L  D  N  L  K  G  I  I  L  D  T  D  L  M  N  E  N  G  C  P  S  P  L  L  L  K  L  M  R :   D  V  V  S  G  L  V  H  L  H  D  L  G  I  I  H  R  D  L  K  P  Q  N  V  L  I  T  K  E  K  F  L  C  A  K  L  S  D  M  G  I  S  K  R  L  I  G  D  M  S  S  L  G  H  R  P  T   : G  Y  G  S  S  G  W  Q  A  P  E  Q  L  L  H  G  R  Q  T  R  A  I  D  M  F  S  L  G  S  V  L  F  F  C  M  T  G  G  R  H  P  F  G  S  P  L  E  R  D  I  N  I  T  K  N  K  M  D  L  F  L  S  E  H  I  P  E  A  V  D  L  F  S  R  L  L  D  P  I  A  E  L  R :   P  K  A  V  K  V  L  A  H  P  F  F  W  T  A  E  M  R  L  S  F  L  R  D  S  S  D  R  V  E  L  E  D  R  E  T  S  S  D  L  L  K  A  L  E  G  T  A  P  V  A  L  G  G  K  W  D  E  K  M  E  P  P  F  I  K  N  I  G  H  Y  R  R  Y  R  F  D  S  I  R  D  L  L  R  V  M  R  N  K  L  N  H  Y  R  E  L  P  T  E  I  Q  :  E  I  I  G  T  V  P  E  G  F  D  G  Y  F  R  R  R  F  P  R  L  L  I  E  V  Y  K  V  M  S  E  Y  C  K  D  E  A  C  F  Q  K  Y  F  T  S  S  V  L  *  A  P  P  D  S  S  L  I  L  F  H  S  Y  I  T  C  M  M  *  H  V  L  *  I  V  I  Y  T  M  *  I  C  L  C  R  G  G  T  R  K  L  S  E  Y  T  T  V  V  G  N  K  N  N  V  Y  M  K  P  N  V  *  S  Y  *  S  M  F  T  N  I  S </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0291P19.2" strand="-"/>
                <serials PGL_serial="16" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="87790" stop="86403"/>
                    <exon start="85600" stop="85428"/>
                    <exon start="85114" stop="84868"/>
                    <exon start="83787" stop="83484"/>
                    <exon start="83271" stop="83125"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>2256</number_coding_nucleotides>
                  <number_encoded_amino_acids>752</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>MKSIDEYISSTPQIAEDGGIVLGSKRTTAFLIDAKTGRLIYTYSMPSSPATQDNDTAFHHNGTIEEKSLPSYTLYITRTDYALTSFIPNSDKVLWNMTVAEIGAAALCKVDDALSGDIMESDKSEPDVHFNMPLPCQSRALIYRRRGHDNKMLPEADNHGMLPIPTSQPNVDNAATPVPDKNVNTFHLKDIIKKTMLVILTVFIIFFTKNIMLQDAKSPFKKGISKCSERLTMPIHSILATLVGAFTHNRDLVAELNGNLHSPNVPSKRKKSRKSGKNGSNGIKSDKDTSSGTGLKYADVDADNKLLNFLQPSICTKGGRSIGKLFVSSSEIAKGSNGTVVFEGIYEGRAVAVKRLVRAHHDIAFKEIQNLIASDRHPNIVRWYGVEQDQDFVYLALERCICSLSDLIQIYADTSENACPNQNLDGESMKHRRYLDNLKGIILDTDLMNENGCPSPLLLKLMRDVVSGLVHLHDLGIIHRDLKPQNVLITKEKFLCAKLSDMGISKRLIGDMSSLGHRPTGYGSSGWQAPEQLLHGRQTRAIDMFSLGSVLFFCMTGGRHPFGSPLERDINITKNKMDLFLSEHIPEAVDLFSRLLDPIAELRPKAVKVLAHPFFWTAEMRLSFLRDSSDRVELEDRETSSDLLKALEGTAPVALGGKWDEKMEPPFIKNIGHYRRYRFDSIRDLLRVMRNKLNHYRELPTEIQEIIGTVPEGFDGYFRRRFPRLLIEVYKVMSEYCKDEACFQKYFTSSVL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="83433" e_stop="82918"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.932"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.932">
            <gDNA_exon_boundary e_start="83433" e_stop="82918" e_length="516"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83433" stop="82918"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E458873" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83433" stop="82918"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E462287" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="16" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATTCAACAAATTGGTGCACTTAACATTTGGTCAAGACTTCCTTTGAGGAATTAGTTTTTGTGTGGGAACATCTCGAAGAACCAGTGTGCTGTAAGGTGGAAATATTATCGATGATTTCAGATTGTATTTGCTGACTTCCGGTGTATCTTCACTTCATTTCAGGAAATTATAGGAACCGTTCCAGAAGGATTTGATGGCTATTTTAGGAGGCGGTTTCCGCGGCTACTAATTGAAGTGTATAAAGTGATGTCAGAATACTGTAAAGATGAAGCCTGTTTTCAGAAGTACTTCACAAGCAGTGTACTTTAGGCTCCTCCAGATAGTAGCTTAATCTTGTTCCATTCTTACATTACATGTATGATGTAACATGTATTGTAAATTGTAATATACACTATGTAAATATGCCTGTGCCGGGGAGGTACCAGAAAGCTGTCCGAATACACCACTGTTGTTGGAAACAAAAATAATGTATATATGAAACCAAATGTGTAATCTTATTAAAGTATGTTTACCAAC</gDNA_template>
            <first_frame> I  Q  Q  I  G  A  L  N  I  W  S  R  L  P  L  R  N  *  F  L  C  G  N  I  S  K  N  Q  C  A  V  R  W  K  Y  Y  R  *  F  Q  I  V  F  A  D  F  R  C  I  F  T  S  F  Q  E  I  I  G  T  V  P  E  G  F  D  G  Y  F  R  R  R  F  P  R  L  L  I  E  V  Y  K  V  M  S  E  Y  C  K  D  E  A  C  F  Q  K  Y  F  T  S  S  V  L  *  A  P  P  D  S  S  L  I  L  F  H  S  Y  I  T  C  M  M  *  H  V  L  *  I  V  I  Y  T  M  *  I  C  L  C  R  G  G  T  R  K  L  S  E  Y  T  T  V  V  G  N  K  N  N  V  Y  M  K  P  N  V  *  S  Y  *  S  M  F  T  N </first_frame>
            <second_frame>  F  N  K  L  V  H  L  T  F  G  Q  D  F  L  *  G  I  S  F  C  V  G  T  S  R  R  T  S  V  L  *  G  G  N  I  I  D  D  F  R  L  Y  L  L  T  S  G  V  S  S  L  H  F  R  K  L  *  E  P  F  Q  K  D  L  M  A  I  L  G  G  G  F  R  G  Y  *  L  K  C  I  K  *  C  Q  N  T  V  K  M  K  P  V  F  R  S  T  S  Q  A  V  Y  F  R  L  L  Q  I  V  A  *  S  C  S  I  L  T  L  H  V  *  C  N  M  Y  C  K  L  *  Y  T  L  C  K  Y  A  C  A  G  E  V  P  E  S  C  P  N  T  P  L  L  L  E  T  K  I  M  Y  I  *  N  Q  M  C  N  L  I  K  V  C  L  P   </second_frame>
            <third_frame>   S  T  N  W  C  T  *  H  L  V  K  T  S  F  E  E  L  V  F  V  W  E  H  L  E  E  P  V  C  C  K  V  E  I  L  S  M  I  S  D  C  I  C  *  L  P  V  Y  L  H  F  I  S  G  N  Y  R  N  R  S  R  R  I  *  W  L  F  *  E  A  V  S  A  A  T  N  *  S  V  *  S  D  V  R  I  L  *  R  *  S  L  F  S  E  V  L  H  K  Q  C  T  L  G  S  S  R  *  *  L  N  L  V  P  F  L  H  Y  M  Y  D  V  T  C  I  V  N  C  N  I  H  Y  V  N  M  P  V  P  G  R  Y  Q  K  A  V  R  I  H  H  C  C  W  K  Q  K  *  C  I  Y  E  T  K  C  V  I  L  L  K  Y  V  Y  Q  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0291P19.2" strand="-"/>
                <serials PGL_serial="16" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="83319" stop="83125"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>192</number_coding_nucleotides>
                  <number_encoded_amino_acids>64</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FQIVFADFRCIFTSFQEIIGTVPEGFDGYFRRRFPRLLIEVYKVMSEYCKDEACFQKYFTSSVL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="17" PGL_strand="+" PGL_start="82948" PGL_stop="83433"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="82948" e_stop="83433"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.928"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.928">
            <gDNA_exon_boundary e_start="82948" e_stop="83433" e_length="486"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82948" stop="83433"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E430705" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="17" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATTTGGTTTCATATATACATTATTTTTGTTTCCAACAACAGTGGTGTATTCGGACAGCTTTCTGGTACCTCCCCGGCACAGGCATATTTACATAGTGTATATTACAATTTACAATACATGTTACATCATACATGTAATGTAAGAATGGAACAAGATTAAGCTACTATCTGGAGGAGCCTAAAGTACACTGCTTGTGAAGTACTTCTGAAAACAGGCTTCATCTTTACAGTATTCTGACATCACTTTATACACTTCAATTAGTAGCCGCGGAAACCGCCTCCTAAAATAGCCATCAAATCCTTCTGGAACGGTTCCTATAATTTCCTGAAATGAAGTGAAGATACACCGGAAGTCAGCAAATACAATCTGAAATCATCGATAATATTTCCACCTTACAGCACACTGGTTCTTCGAGATGTTCCCACACAAAAACTAATTCCTCAAAGGAAGTCTTGACCAAATGTTAAGTGCACCAATTTGTTGAAT</gDNA_template>
            <first_frame> I  W  F  H  I  Y  I  I  F  V  S  N  N  S  G  V  F  G  Q  L  S  G  T  S  P  A  Q  A  Y  L  H  S  V  Y  Y  N  L  Q  Y  M  L  H  H  T  C  N  V  R  M  E  Q  D  *  A  T  I  W  R  S  L  K  Y  T  A  C  E  V  L  L  K  T  G  F  I  F  T  V  F  *  H  H  F  I  H  F  N  *  *  P  R  K  P  P  P  K  I  A  I  K  S  F  W  N  G  S  Y  N  F  L  K  *  S  E  D  T  P  E  V  S  K  Y  N  L  K  S  S  I  I  F  P  P  Y  S  T  L  V  L  R  D  V  P  T  Q  K  L  I  P  Q  R  K  S  *  P  N  V  K  C  T  N  L  L  N </first_frame>
            <second_frame>  F  G  F  I  Y  T  L  F  L  F  P  T  T  V  V  Y  S  D  S  F  L  V  P  P  R  H  R  H  I  Y  I  V  Y  I  T  I  Y  N  T  C  Y  I  I  H  V  M  *  E  W  N  K  I  K  L  L  S  G  G  A  *  S  T  L  L  V  K  Y  F  *  K  Q  A  S  S  L  Q  Y  S  D  I  T  L  Y  T  S  I  S  S  R  G  N  R  L  L  K  *  P  S  N  P  S  G  T  V  P  I  I  S  *  N  E  V  K  I  H  R  K  S  A  N  T  I  *  N  H  R  *  Y  F  H  L  T  A  H  W  F  F  E  M  F  P  H  K  N  *  F  L  K  G  S  L  D  Q  M  L  S  A  P  I  C  *   </second_frame>
            <third_frame>   L  V  S  Y  I  H  Y  F  C  F  Q  Q  Q  W  C  I  R  T  A  F  W  Y  L  P  G  T  G  I  F  T  *  C  I  L  Q  F  T  I  H  V  T  S  Y  M  *  C  K  N  G  T  R  L  S  Y  Y  L  E  E  P  K  V  H  C  L  *  S  T  S  E  N  R  L  H  L  Y  S  I  L  T  S  L  Y  T  L  Q  L  V  A  A  E  T  A  S  *  N  S  H  Q  I  L  L  E  R  F  L  *  F  P  E  M  K  *  R  Y  T  G  S  Q  Q  I  Q  S  E  I  I  D  N  I  S  T  L  Q  H  T  G  S  S  R  C  S  H  T  K  T  N  S  S  K  E  V  L  T  K  C  *  V  H  Q  F  V  E  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0291P19.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="18" PGL_strand="-" PGL_start="90286" PGL_stop="88481"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="90286" e_stop="89901"/>
            <exon e_start="88786" e_stop="88481"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.989" acc_prob="0.859" e_score="0.994"/>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.994">
            <gDNA_exon_boundary e_start="90286" e_stop="89901" e_length="386"/>
          </exon>
          <intron i_serial="1" don_prob="0.989" acc_prob="0.859">
            <gDNA_intron_boundary i_start="89900" i_stop="88787" i_length="1114"/>
          </intron>
          <exon e_serial="2" e_score="0.997">
            <gDNA_exon_boundary e_start="88786" e_stop="88481" e_length="306"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90286" stop="90022"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E268696" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90259" stop="89901"/>
              <exon start="88786" stop="88481"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E212326" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90259" stop="89985"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E200929" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="18" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CAATGAGGCAAAGAAAGACAGACAGCCATCGATCGACGAAATTCGAGGAACCCAAAATCCAGACGACAACGCCCTTTCTTTCATATTTCGAATCGAATCTCTAAGATTTCCTCAATTGCAATCTTCGATGTAACCCATAACTCTATCGTACGCCACCACTCCTAATTTATTTGTATACCCCCACCCCCATCAACAGAAGAAAAATCGGCGGTCAATTTCAGGTCGATGAGACGCTACTGGGTGATTCCGGCCGGCATTTTACTCTTATTTTTCAGCTTGACGGTTTTGGCAAGTGAGTTATTTGGCTTACCAAGTGGGTCAATTGAAGGAGTTTCTGATGGGGTTACGCTAGCTCCGGCGAGGAGGAATTTGCTGTCGGAATTAAA : GCTCCTGTTAATTACAATAACAGCAAGGAGGCATCATCTGATATAGGAAGTGGTTATTTCATCGACTGTGGCCGTGGGGATGATTGGGAGTTGTATGCACACAACAGGCTTGGTAAATTGGTATTGTCTCTAAATTTTATGCGAGTCTCTTCTGTACAATACAACGAGAAATGATATCCACTTAACATTGATTGATAATGAGGAATGGTACCATTCTTTTTCGAGAAAGGTAACAGGAAAAGGTTTCACACAATGAATCATGATGCCAATTAATCTTGTATTATCAACTAGATATCCATCTATCTT</gDNA_template>
            <first_frame> Q  *  G  K  E  R  Q  T  A  I  D  R  R  N  S  R  N  P  K  S  R  R  Q  R  P  F  F  H  I  S  N  R  I  S  K  I  S  S  I  A  I  F  D  V  T  H  N  S  I  V  R  H  H  S  *  F  I  C  I  P  P  P  P  S  T  E  E  K  S  A  V  N  F  R  S  M  R  R  Y  W  V  I  P  A  G  I  L  L  L  F  F  S  L  T  V  L  A  S  E  L  F  G  L  P  S  G  S  I  E  G  V  S  D  G  V  T  L  A  P  A  R  R  N  L  L  S  E  L  K :   L  L  L  I  T  I  T  A  R  R  H  H  L  I  *  E  V  V  I  S  S  T  V  A  V  G  M  I  G  S  C  M  H  T  T  G  L  V  N  W  Y  C  L  *  I  L  C  E  S  L  L  Y  N  T  T  R  N  D  I  H  L  T  L  I  D  N  E  E  W  Y  H  S  F  S  R  K  V  T  G  K  G  F  T  Q  *  I  M  M  P  I  N  L  V  L  S  T  R  Y  P  S  I   </first_frame>
            <second_frame>  N  E  A  K  K  D  R  Q  P  S  I  D  E  I  R  G  T  Q  N  P  D  D  N  A  L  S  F  I  F  R  I  E  S  L  R  F  P  Q  L  Q  S  S  M  *  P  I  T  L  S  Y  A  T  T  P  N  L  F  V  Y  P  H  P  H  Q  Q  K  K  N  R  R  S  I  S  G  R  *  D  A  T  G  *  F  R  P  A  F  Y  S  Y  F  S  A  *  R  F  W  Q  V  S  Y  L  A  Y  Q  V  G  Q  L  K  E  F  L  M  G  L  R  *  L  R  R  G  G  I  C  C  R  N  *   : S  S  C  *  L  Q  *  Q  Q  G  G  I  I  *  Y  R  K  W  L  F  H  R  L  W  P  W  G  *  L  G  V  V  C  T  Q  Q  A  W  *  I  G  I  V  S  K  F  Y  A  S  L  F  C  T  I  Q  R  E  M  I  S  T  *  H  *  L  I  M  R  N  G  T  I  L  F  R  E  R  *  Q  E  K  V  S  H  N  E  S  *  C  Q  L  I  L  Y  Y  Q  L  D  I  H  L  S  </second_frame>
            <third_frame>   M  R  Q  R  K  T  D  S  H  R  S  T  K  F  E  E  P  K  I  Q  T  T  T  P  F  L  S  Y  F  E  S  N  L  *  D  F  L  N  C  N  L  R  C  N  P  *  L  Y  R  T  P  P  L  L  I  Y  L  Y  T  P  T  P  I  N  R  R  K  I  G  G  Q  F  Q  V  D  E  T  L  L  G  D  S  G  R  H  F  T  L  I  F  Q  L  D  G  F  G  K  *  V  I  W  L  T  K  W  V  N  *  R  S  F  *  W  G  Y  A  S  S  G  E  E  E  F  A  V  G  I  K  :  A  P  V  N  Y  N  N  S  K  E  A  S  S  D  I  G  S  G  Y  F  I  D  C  G  R  G  D  D  W  E  L  Y  A  H  N  R  L  G  K  L  V  L  S  L  N  F  M  R  V  S  S  V  Q  Y  N  E  K  *  Y  P  L  N  I  D  *  *  *  G  M  V  P  F  F  F  E  K  G  N  R  K  R  F  H  T  M  N  H  D  A  N  *  S  C  I  I  N  *  I  S  I  Y  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0291P19.2" strand="-"/>
                <serials PGL_serial="18" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="90121" stop="89901"/>
                    <exon start="88786" stop="88741"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>264</number_coding_nucleotides>
                  <number_encoded_amino_acids>88</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FICIPPPPSTEEKSAVNFRSMRRYWVIPAGILLLFFSLTVLASELFGLPSGSIEGVSDGVTLAPARRNLLSELKLLLITITARRHHLI*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0291P19.2" strand="-"/>
                <serials PGL_serial="18" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="89948" stop="89901"/>
                    <exon start="88786" stop="88613"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>219</number_coding_nucleotides>
                  <number_encoded_amino_acids>73</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>WGYASSGEEEFAVGIKAPVNYNNSKEASSDIGSGYFIDCGRGDDWELYAHNRLGKLVLSLNFMRVSSVQYNEK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="19" PGL_strand="+" PGL_start="93583" PGL_stop="112114"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="93583" e_stop="93705"/>
            <exon e_start="93789" e_stop="93929"/>
            <exon e_start="94022" e_stop="94179"/>
            <exon e_start="95007" e_stop="95062"/>
            <exon e_start="96177" e_stop="96299"/>
            <exon e_start="96502" e_stop="96632"/>
            <exon e_start="96733" e_stop="96973"/>
            <exon e_start="100137" e_stop="100284"/>
            <exon e_start="101494" e_stop="101734"/>
            <exon e_start="102004" e_stop="102160"/>
            <exon e_start="102298" e_stop="102366"/>
            <exon e_start="103264" e_stop="103389"/>
            <exon e_start="103512" e_stop="103564"/>
            <exon e_start="104052" e_stop="104158"/>
            <exon e_start="106554" e_stop="106608"/>
            <exon e_start="106718" e_stop="106817"/>
            <exon e_start="107168" e_stop="107230"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.986" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.971" e_score="1.000"/>
          <exon-intron don_prob="0.989" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.950" acc_prob="0.890" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.498" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.921" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.964" e_score="0.967"/>
          <exon-intron don_prob="0.989" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.941" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.900" acc_prob="0.877" e_score="1.000"/>
          <exon-intron don_prob="0.987" acc_prob="0.985" e_score="1.000"/>
          <exon-intron don_prob="0.714" acc_prob="0.990" e_score="1.000"/>
          <exon-intron don_prob="0.965" acc_prob="0.891" e_score="1.000"/>
          <exon-intron don_prob="0.954" acc_prob="0.985" e_score="1.000"/>
          <exon-intron don_prob="0.825" acc_prob="0.995" e_score="1.000"/>
          <exon-only e_score="0.968"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="93583" e_stop="93705" e_length="123"/>
          </exon>
          <intron i_serial="1" don_prob="0.986" acc_prob="0.999">
            <gDNA_intron_boundary i_start="93706" i_stop="93788" i_length="83"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="93789" e_stop="93929" e_length="141"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.971">
            <gDNA_intron_boundary i_start="93930" i_stop="94021" i_length="92"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="94022" e_stop="94179" e_length="158"/>
          </exon>
          <intron i_serial="3" don_prob="0.989" acc_prob="0.994">
            <gDNA_intron_boundary i_start="94180" i_stop="95006" i_length="827"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="95007" e_stop="95062" e_length="56"/>
          </exon>
          <intron i_serial="4" don_prob="0.950" acc_prob="0.890">
            <gDNA_intron_boundary i_start="95063" i_stop="96176" i_length="1114"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="96177" e_stop="96299" e_length="123"/>
          </exon>
          <intron i_serial="5" don_prob="0.998" acc_prob="0.498">
            <gDNA_intron_boundary i_start="96300" i_stop="96501" i_length="202"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="96502" e_stop="96632" e_length="131"/>
          </exon>
          <intron i_serial="6" don_prob="0.998" acc_prob="0.921">
            <gDNA_intron_boundary i_start="96633" i_stop="96732" i_length="100"/>
          </intron>
          <exon e_serial="7" e_score="0.967">
            <gDNA_exon_boundary e_start="96733" e_stop="96973" e_length="241"/>
          </exon>
          <intron i_serial="7" don_prob="0.999" acc_prob="0.964">
            <gDNA_intron_boundary i_start="96974" i_stop="100136" i_length="3163"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="100137" e_stop="100284" e_length="148"/>
          </exon>
          <intron i_serial="8" don_prob="0.989" acc_prob="1.000">
            <gDNA_intron_boundary i_start="100285" i_stop="101493" i_length="1209"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="101494" e_stop="101734" e_length="241"/>
          </exon>
          <intron i_serial="9" don_prob="1.000" acc_prob="1.000">
            <gDNA_intron_boundary i_start="101735" i_stop="102003" i_length="269"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="102004" e_stop="102160" e_length="157"/>
          </exon>
          <intron i_serial="10" don_prob="0.941" acc_prob="0.994">
            <gDNA_intron_boundary i_start="102161" i_stop="102297" i_length="137"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="102298" e_stop="102366" e_length="69"/>
          </exon>
          <intron i_serial="11" don_prob="0.900" acc_prob="0.877">
            <gDNA_intron_boundary i_start="102367" i_stop="103263" i_length="897"/>
          </intron>
          <exon e_serial="12" e_score="1.000">
            <gDNA_exon_boundary e_start="103264" e_stop="103389" e_length="126"/>
          </exon>
          <intron i_serial="12" don_prob="0.987" acc_prob="0.985">
            <gDNA_intron_boundary i_start="103390" i_stop="103511" i_length="122"/>
          </intron>
          <exon e_serial="13" e_score="1.000">
            <gDNA_exon_boundary e_start="103512" e_stop="103564" e_length="53"/>
          </exon>
          <intron i_serial="13" don_prob="0.714" acc_prob="0.990">
            <gDNA_intron_boundary i_start="103565" i_stop="104051" i_length="487"/>
          </intron>
          <exon e_serial="14" e_score="1.000">
            <gDNA_exon_boundary e_start="104052" e_stop="104158" e_length="107"/>
          </exon>
          <intron i_serial="14" don_prob="0.965" acc_prob="0.891">
            <gDNA_intron_boundary i_start="104159" i_stop="106553" i_length="2395"/>
          </intron>
          <exon e_serial="15" e_score="1.000">
            <gDNA_exon_boundary e_start="106554" e_stop="106608" e_length="55"/>
          </exon>
          <intron i_serial="15" don_prob="0.954" acc_prob="0.985">
            <gDNA_intron_boundary i_start="106609" i_stop="106717" i_length="109"/>
          </intron>
          <exon e_serial="16" e_score="1.000">
            <gDNA_exon_boundary e_start="106718" e_stop="106817" e_length="100"/>
          </exon>
          <intron i_serial="16" don_prob="0.825" acc_prob="0.995">
            <gDNA_intron_boundary i_start="106818" i_stop="107167" i_length="350"/>
          </intron>
          <exon e_serial="17" e_score="0.968">
            <gDNA_exon_boundary e_start="107168" e_stop="107230" e_length="63"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="93583" stop="93705"/>
              <exon start="93789" stop="93929"/>
              <exon start="94022" stop="94179"/>
              <exon start="95007" stop="95062"/>
              <exon start="96177" stop="96249"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E245530" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="93595" stop="93705"/>
              <exon start="93789" stop="93929"/>
              <exon start="94022" stop="94179"/>
              <exon start="95007" stop="95062"/>
              <exon start="96177" stop="96299"/>
              <exon start="96502" stop="96632"/>
              <exon start="96733" stop="96876"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E739915" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="96528" stop="96632"/>
              <exon start="96733" stop="96973"/>
              <exon start="100137" stop="100284"/>
              <exon start="101494" stop="101692"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E575316" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="96876" stop="96973"/>
              <exon start="100137" stop="100284"/>
              <exon start="101494" stop="101734"/>
              <exon start="102004" stop="102160"/>
              <exon start="102298" stop="102366"/>
              <exon start="103264" stop="103346"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E549019" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100137" stop="100284"/>
              <exon start="101494" stop="101734"/>
              <exon start="102004" stop="102160"/>
              <exon start="102298" stop="102366"/>
              <exon start="103264" stop="103347"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E740922" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100137" stop="100284"/>
              <exon start="101494" stop="101722"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E307399" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100201" stop="100284"/>
              <exon start="101494" stop="101734"/>
              <exon start="102004" stop="102142"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E566924" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100221" stop="100284"/>
              <exon start="101494" stop="101734"/>
              <exon start="102004" stop="102160"/>
              <exon start="102298" stop="102366"/>
              <exon start="103264" stop="103389"/>
              <exon start="103512" stop="103564"/>
              <exon start="104052" stop="104132"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E262318" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102080" stop="102160"/>
              <exon start="102298" stop="102366"/>
              <exon start="103264" stop="103389"/>
              <exon start="103512" stop="103564"/>
              <exon start="104052" stop="104158"/>
              <exon start="106554" stop="106608"/>
              <exon start="106718" stop="106817"/>
              <exon start="107168" stop="107230"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E698948" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="19" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTCAACACCAAACGCACTTGAGCATAAACTCCTGTATCCATAAACCCTAAATCCAAAGAATCCATAGCGATGTTGAAGAACAAAGCTTTCTCGCGTCAAACAAGACAAGGCAGAATAATTAAG : GAAGTTAGGGAACACTATTTGAGAGATGATATTTATTGTGGAGCCCCTTATTGCAAGAATGGGTGTAAAGTTTCATCTCCTTGTTTAAGCGACTCTCACTTCACTATTCTTGTTCTTGACACCAACGTTGTTCTCAATCAG : ATTGATTTGCTGGAGAATCAAGCTATTGACAATGTGGTGGTGCTATCCGTGGTCTTGTCGGAGGTCAAGAACAAGAATATTGCGGTTTATAACAGACTCAGGGCTCTGTGTAGCAATTCTTTAAGGAAGTTCTTTGTCTTTTCTAACGAAAATCACAA : GGATACTTATGTGAAGACCATGGCAGGTGAAAGTCCAAATGATCGGAACGATAGAG : CTATTAGGGTTGCAGCTAAATGGTATCAAGATCATCTTGGCAGCGCAGTAAGTGTCTTGCTAATTACGAATGATAGAGAGAATAAGAAGAAGGCAATTGAAGAGGGAATTTCTGCAGAGACAG : TTGAGTGCTATGTAAAGTCACTTGGTCAGCCAGAATTGCTTGACCTAATAGTACAGCCTCCTTCTGAAGATGTTAAAATGGATGATGTTGAGGATTTAAGGCCTTCAAAGCGAAAAGTCATTTATAACGAG : CATAAGCCCATGTCAGAAATTACTTCTGGCTTGCTTCGGGGACTCCTTCACCAGGGGAAACTTCGTGTTAACCGTTTTAATCCATTTGAAGCATATGTCGGAAGTGAAAGCATTGGTGATGAGATAATTATATATGGACGTGCAAACATGAATAGAGCTTTTGACGGTGATATAGTGGCAGTTGAGCTTTTGCCTCCAGAACAGTGGCACGAGGAGAAGTCTTTGGCATTAGCCGATGAAG : ATGATGAAGAAGAAGATGTTCATTTAGCTCCAAACACTGCTGATGATGCTCCAAGAGCCCTGAATCAAGGGCAAACTGCACCTGAGGAAATGAAACCTTCTCGTCCAACTGGATGTGTTGTTGGTATCATAAAGCGGAACTGGCACTC : TTACTGTGGATCCTTGGAGCCTATGCCTATGCCAGCTGGTGATGGTGGTCGTGCCCATGCCTTATTTGTATCCAAAGACCGCAGAATTCCGAAGATACGGATACAAACTCGTCAATTGGGAAATTTGCTGGATAAACGGATTATTGTTGCGGTTGATTCATGGGATCGTTTGTCCCGATATCCAACTGGTCACTATGTGAGGACTATTGGTGAAATAGGTGATAGGGACACCGAAACAGAG : GTGGTACTAATAGAGAATGATATAGATGCCAGGCCATTTTCTGCCCAAGTGTTGGCGTGCTTGCCACCATTACCTTGGTTGGTGTCTTCTCAAGATTTGACAAATCCGATTAGACAGGATTTGCGTCACCTGCGTGTATGTAGTGTGGACCCTCCTG : GATGCAGAGATATTGATGATGCATTGCATTGTATGCCTCTTTCAAATGGAAATTTTGAAGTGGGAGTTC : ATATTGCCGATGTCACAAATTTTGTTCATCCTGGAACTCCACTCGATGATGAGGCTTCACAAAGGGGCACTTCTGTATATCTTGTAGAGCGTAGAATCGACATGCTTCCAAAACCTCTTACAGAAG : ATATTTGTTCACTTCGTTCTGATGTTGAAAGACTAGCTTTCTCAGTTATCTGG : GAAATGACACCTGATGCTGAGGTTATTTCTACAAGATACACTAAAAGTGTGATTAAATCATGTGCAGCATTATCCTATGTCGAGGCACAAGTGAGAATGGATGACAG : TCGCTTGGTGGATCCAATAACTTCAGATTTACGAAATTTGAATGGGTTAGCCAAG : ATAATGAGGCAAAGACGCATTGATAGGGGTGCACTGACACTTGCTTCTGCTGAAGTCAAATTTCAGATTGATACTGAAACTCATGACCCTCTTGATATTG : GAATGTATCAGATTCGTGAAGCAAACCAAATGGTTGAGGAGTTTATGCTTGCTGCTAATGTTG</gDNA_template>
            <first_frame> F  N  T  K  R  T  *  A  *  T  P  V  S  I  N  P  K  S  K  E  S  I  A  M  L  K  N  K  A  F  S  R  Q  T  R  Q  G  R  I  I  K  :  E  V  R  E  H  Y  L  R  D  D  I  Y  C  G  A  P  Y  C  K  N  G  C  K  V  S  S  P  C  L  S  D  S  H  F  T  I  L  V  L  D  T  N  V  V  L  N  Q  :  I  D  L  L  E  N  Q  A  I  D  N  V  V  V  L  S  V  V  L  S  E  V  K  N  K  N  I  A  V  Y  N  R  L  R  A  L  C  S  N  S  L  R  K  F  F  V  F  S  N  E  N  H  K :   D  T  Y  V  K  T  M  A  G  E  S  P  N  D  R  N  D  R   : A  I  R  V  A  A  K  W  Y  Q  D  H  L  G  S  A  V  S  V  L  L  I  T  N  D  R  E  N  K  K  K  A  I  E  E  G  I  S  A  E  T   : V  E  C  Y  V  K  S  L  G  Q  P  E  L  L  D  L  I  V  Q  P  P  S  E  D  V  K  M  D  D  V  E  D  L  R  P  S  K  R  K  V  I  Y  N  E  :  H  K  P  M  S  E  I  T  S  G  L  L  R  G  L  L  H  Q  G  K  L  R  V  N  R  F  N  P  F  E  A  Y  V  G  S  E  S  I  G  D  E  I  I  I  Y  G  R  A  N  M  N  R  A  F  D  G  D  I  V  A  V  E  L  L  P  P  E  Q  W  H  E  E  K  S  L  A  L  A  D  E   : D  D  E  E  E  D  V  H  L  A  P  N  T  A  D  D  A  P  R  A  L  N  Q  G  Q  T  A  P  E  E  M  K  P  S  R  P  T  G  C  V  V  G  I  I  K  R  N  W  H  S :   Y  C  G  S  L  E  P  M  P  M  P  A  G  D  G  G  R  A  H  A  L  F  V  S  K  D  R  R  I  P  K  I  R  I  Q  T  R  Q  L  G  N  L  L  D  K  R  I  I  V  A  V  D  S  W  D  R  L  S  R  Y  P  T  G  H  Y  V  R  T  I  G  E  I  G  D  R  D  T  E  T  E  :  V  V  L  I  E  N  D  I  D  A  R  P  F  S  A  Q  V  L  A  C  L  P  P  L  P  W  L  V  S  S  Q  D  L  T  N  P  I  R  Q  D  L  R  H  L  R  V  C  S  V  D  P  P   : G  C  R  D  I  D  D  A  L  H  C  M  P  L  S  N  G  N  F  E  V  G  V   : H  I  A  D  V  T  N  F  V  H  P  G  T  P  L  D  D  E  A  S  Q  R  G  T  S  V  Y  L  V  E  R  R  I  D  M  L  P  K  P  L  T  E   : D  I  C  S  L  R  S  D  V  E  R  L  A  F  S  V  I  W  :  E  M  T  P  D  A  E  V  I  S  T  R  Y  T  K  S  V  I  K  S  C  A  A  L  S  Y  V  E  A  Q  V  R  M  D  D  S :   R  L  V  D  P  I  T  S  D  L  R  N  L  N  G  L  A  K  :  I  M  R  Q  R  R  I  D  R  G  A  L  T  L  A  S  A  E  V  K  F  Q  I  D  T  E  T  H  D  P  L  D  I   : G  M  Y  Q  I  R  E  A  N  Q  M  V  E  E  F  M  L  A  A  N  V  </first_frame>
            <second_frame>  S  T  P  N  A  L  E  H  K  L  L  Y  P  *  T  L  N  P  K  N  P  *  R  C  *  R  T  K  L  S  R  V  K  Q  D  K  A  E  *  L  R :   K  L  G  N  T  I  *  E  M  I  F  I  V  E  P  L  I  A  R  M  G  V  K  F  H  L  L  V  *  A  T  L  T  S  L  F  L  F  L  T  P  T  L  F  S  I  R :   L  I  C  W  R  I  K  L  L  T  M  W  W  C  Y  P  W  S  C  R  R  S  R  T  R  I  L  R  F  I  T  D  S  G  L  C  V  A  I  L  *  G  S  S  L  S  F  L  T  K  I  T   : R  I  L  M  *  R  P  W  Q  V  K  V  Q  M  I  G  T  I  E  :  L  L  G  L  Q  L  N  G  I  K  I  I  L  A  A  Q  *  V  S  C  *  L  R  M  I  E  R  I  R  R  R  Q  L  K  R  E  F  L  Q  R  Q  :  L  S  A  M  *  S  H  L  V  S  Q  N  C  L  T  *  *  Y  S  L  L  L  K  M  L  K  W  M  M  L  R  I  *  G  L  Q  S  E  K  S  F  I  T  S :   I  S  P  C  Q  K  L  L  L  A  C  F  G  D  S  F  T  R  G  N  F  V  L  T  V  L  I  H  L  K  H  M  S  E  V  K  A  L  V  M  R  *  L  Y  M  D  V  Q  T  *  I  E  L  L  T  V  I  *  W  Q  L  S  F  C  L  Q  N  S  G  T  R  R  S  L  W  H  *  P  M  K  :  M  M  K  K  K  M  F  I  *  L  Q  T  L  L  M  M  L  Q  E  P  *  I  K  G  K  L  H  L  R  K  *  N  L  L  V  Q  L  D  V  L  L  V  S  *  S  G  T  G  T   : L  T  V  D  P  W  S  L  C  L  C  Q  L  V  M  V  V  V  P  M  P  Y  L  Y  P  K  T  A  E  F  R  R  Y  G  Y  K  L  V  N  W  E  I  C  W  I  N  G  L  L  L  R  L  I  H  G  I  V  C  P  D  I  Q  L  V  T  M  *  G  L  L  V  K  *  V  I  G  T  P  K  Q  R :   W  Y  *  *  R  M  I  *  M  P  G  H  F  L  P  K  C  W  R  A  C  H  H  Y  L  G  W  C  L  L  K  I  *  Q  I  R  L  D  R  I  C  V  T  C  V  Y  V  V  W  T  L  L  :  D  A  E  I  L  M  M  H  C  I  V  C  L  F  Q  M  E  I  L  K  W  E  F  :  I  L  P  M  S  Q  I  L  F  I  L  E  L  H  S  M  M  R  L  H  K  G  A  L  L  Y  I  L  *  S  V  E  S  T  C  F  Q  N  L  L  Q  K  :  I  F  V  H  F  V  L  M  L  K  D  *  L  S  Q  L  S  G :   K  *  H  L  M  L  R  L  F  L  Q  D  T  L  K  V  *  L  N  H  V  Q  H  Y  P  M  S  R  H  K  *  E  W  M  T   : V  A  W  W  I  Q  *  L  Q  I  Y  E  I  *  M  G  *  P  R :   *  *  G  K  D  A  L  I  G  V  H  *  H  L  L  L  L  K  S  N  F  R  L  I  L  K  L  M  T  L  L  I  L  :  E  C  I  R  F  V  K  Q  T  K  W  L  R  S  L  C  L  L  L  M  L </second_frame>
            <third_frame>   Q  H  Q  T  H  L  S  I  N  S  C  I  H  K  P  *  I  Q  R  I  H  S  D  V  E  E  Q  S  F  L  A  S  N  K  T  R  Q  N  N  *   : G  S  *  G  T  L  F  E  R  *  Y  L  L  W  S  P  L  L  Q  E  W  V  *  S  F  I  S  L  F  K  R  L  S  L  H  Y  S  C  S  *  H  Q  R  C  S  Q  S   : D  *  F  A  G  E  S  S  Y  *  Q  C  G  G  A  I  R  G  L  V  G  G  Q  E  Q  E  Y  C  G  L  *  Q  T  Q  G  S  V  *  Q  F  F  K  E  V  L  C  L  F  *  R  K  S  Q  :  G  Y  L  C  E  D  H  G  R  *  K  S  K  *  S  E  R  *  S :   Y  *  G  C  S  *  M  V  S  R  S  S  W  Q  R  S  K  C  L  A  N  Y  E  *  *  R  E  *  E  E  G  N  *  R  G  N  F  C  R  D  S :   *  V  L  C  K  V  T  W  S  A  R  I  A  *  P  N  S  T  A  S  F  *  R  C  *  N  G  *  C  *  G  F  K  A  F  K  A  K  S  H  L  *  R   : A  *  A  H  V  R  N  Y  F  W  L  A  S  G  T  P  S  P  G  E  T  S  C  *  P  F  *  S  I  *  S  I  C  R  K  *  K  H  W  *  *  D  N  Y  I  W  T  C  K  H  E  *  S  F  *  R  *  Y  S  G  S  *  A  F  A  S  R  T  V  A  R  G  E  V  F  G  I  S  R  *  R :   *  *  R  R  R  C  S  F  S  S  K  H  C  *  *  C  S  K  S  P  E  S  R  A  N  C  T  *  G  N  E  T  F  S  S  N  W  M  C  C  W  Y  H  K  A  E  L  A  L  :  L  L  W  I  L  G  A  Y  A  Y  A  S  W  *  W  W  S  C  P  C  L  I  C  I  Q  R  P  Q  N  S  E  D  T  D  T  N  S  S  I  G  K  F  A  G  *  T  D  Y  C  C  G  *  F  M  G  S  F  V  P  I  S  N  W  S  L  C  E  D  Y  W  *  N  R  *  *  G  H  R  N  R   : G  G  T  N  R  E  *  Y  R  C  Q  A  I  F  C  P  S  V  G  V  L  A  T  I  T  L  V  G  V  F  S  R  F  D  K  S  D  *  T  G  F  A  S  P  A  C  M  *  C  G  P  S  W :   M  Q  R  Y  *  *  C  I  A  L  Y  A  S  F  K  W  K  F  *  S  G  S  S :   Y  C  R  C  H  K  F  C  S  S  W  N  S  T  R  *  *  G  F  T  K  G  H  F  C  I  S  C  R  A  *  N  R  H  A  S  K  T  S  Y  R  R :   Y  L  F  T  S  F  *  C  *  K  T  S  F  L  S  Y  L   : G  N  D  T  *  C  *  G  Y  F  Y  K  I  H  *  K  C  D  *  I  M  C  S  I  I  L  C  R  G  T  S  E  N  G  *  Q  :  S  L  G  G  S  N  N  F  R  F  T  K  F  E  W  V  S  Q   : D  N  E  A  K  T  H  *  *  G  C  T  D  T  C  F  C  *  S  Q  I  S  D  *  Y  *  N  S  *  P  S  *  Y  W :   N  V  S  D  S  *  S  K  P  N  G  *  G  V  Y  A  C  C  *  C   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0291P19.2" strand="+"/>
                <serials PGL_serial="19" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="93610" stop="93705"/>
                    <exon start="93789" stop="93929"/>
                    <exon start="94022" stop="94179"/>
                    <exon start="95007" stop="95062"/>
                    <exon start="96177" stop="96299"/>
                    <exon start="96502" stop="96632"/>
                    <exon start="96733" stop="96973"/>
                    <exon start="100137" stop="100284"/>
                    <exon start="101494" stop="101734"/>
                    <exon start="102004" stop="102160"/>
                    <exon start="102298" stop="102366"/>
                    <exon start="103264" stop="103389"/>
                    <exon start="103512" stop="103564"/>
                    <exon start="104052" stop="104158"/>
                    <exon start="106554" stop="106608"/>
                    <exon start="106718" stop="106817"/>
                    <exon start="107168" stop="107229"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>2064</number_coding_nucleotides>
                  <number_encoded_amino_acids>688</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TPVSINPKSKESIAMLKNKAFSRQTRQGRIIKEVREHYLRDDIYCGAPYCKNGCKVSSPCLSDSHFTILVLDTNVVLNQIDLLENQAIDNVVVLSVVLSEVKNKNIAVYNRLRALCSNSLRKFFVFSNENHKDTYVKTMAGESPNDRNDRAIRVAAKWYQDHLGSAVSVLLITNDRENKKKAIEEGISAETVECYVKSLGQPELLDLIVQPPSEDVKMDDVEDLRPSKRKVIYNEHKPMSEITSGLLRGLLHQGKLRVNRFNPFEAYVGSESIGDEIIIYGRANMNRAFDGDIVAVELLPPEQWHEEKSLALADEDDEEEDVHLAPNTADDAPRALNQGQTAPEEMKPSRPTGCVVGIIKRNWHSYCGSLEPMPMPAGDGGRAHALFVSKDRRIPKIRIQTRQLGNLLDKRIIVAVDSWDRLSRYPTGHYVRTIGEIGDRDTETEVVLIENDIDARPFSAQVLACLPPLPWLVSSQDLTNPIRQDLRHLRVCSVDPPGCRDIDDALHCMPLSNGNFEVGVHIADVTNFVHPGTPLDDEASQRGTSVYLVERRIDMLPKPLTEDICSLRSDVERLAFSVIWEMTPDAEVISTRYTKSVIKSCAALSYVEAQVRMDDSRLVDPITSDLRNLNGLAKIMRQRRIDRGALTLASAEVKFQIDTETHDPLDIGMYQIREANQMVEEFMLAANV</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="107662" e_stop="108166"/>
            <exon e_start="110001" e_stop="110060"/>
            <exon e_start="110150" e_stop="110171"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.958" e_score="1.000"/>
          <exon-intron don_prob="0.432" acc_prob="0.994" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="107662" e_stop="108166" e_length="505"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.958">
            <gDNA_intron_boundary i_start="108167" i_stop="110000" i_length="1834"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="110001" e_stop="110060" e_length="60"/>
          </exon>
          <intron i_serial="2" don_prob="0.432" acc_prob="0.994">
            <gDNA_intron_boundary i_start="110061" i_stop="110149" i_length="89"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="110150" e_stop="110171" e_length="22"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="107662" stop="108166"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E392689" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="107663" stop="108166"/>
              <exon start="110001" stop="110060"/>
              <exon start="110150" stop="110171"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E243553" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="107663" stop="108166"/>
              <exon start="110001" stop="110060"/>
              <exon start="110150" stop="110169"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E244506" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="107663" stop="108166"/>
              <exon start="110001" stop="110055"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E233441" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="107663" stop="108161"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E228145" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="107663" stop="108083"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E241188" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="107663" stop="108079"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E236499" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="19" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGTAAGGGCTTCAATTCTTTGAAGGGACGATGACATATTTTTTAAGGGCTTCAGTTTCTTATAGGGGTGATGCTTGTCTAGTATTAACAGGCTTAACATACTCAGTCCACTTTTACATGCAACTCTGCTTCGTCTTCTCCCCTCCTTCACCAACCTGTTCTTTCTGTACAATTTTCATACATCACATAGCTATTCATAGTTGTCTAAGATGGAGCACTAGAGACAGATATGGCGGCTCTAGTCGAATTCCAAGTGTTCCGCTAAACTCGAATTACATGTTATGCCAGAGTTGTGACACTTTGAAATGGCTATAAAAGCTTACATTTGGTACTTCAATTAAATTTGATAATTCTCCAAGATTACATGATGCATTTTCATTTGTAGACGCCATCCAAGCCCAACCAAAGAAATGCTTGAGCCTCTTCTCCGCACAGCTGAAGCAGTTGGTCTTAGTTTGGATGTGACATCATCCAAAGCATTGGCTGACTCTCTAGATCTTGCCGAG : GGTGACGATCCATACTTCAACAAGCTGATCCGGATTCTGGCAACCAGATGCATGACACAG : GCGGTTTACTTTTGTAGTGGAG</gDNA_template>
            <first_frame> C  K  G  F  N  S  L  K  G  R  *  H  I  F  *  G  L  Q  F  L  I  G  V  M  L  V  *  Y  *  Q  A  *  H  T  Q  S  T  F  T  C  N  S  A  S  S  S  P  L  L  H  Q  P  V  L  S  V  Q  F  S  Y  I  T  *  L  F  I  V  V  *  D  G  A  L  E  T  D  M  A  A  L  V  E  F  Q  V  F  R  *  T  R  I  T  C  Y  A  R  V  V  T  L  *  N  G  Y  K  S  L  H  L  V  L  Q  L  N  L  I  I  L  Q  D  Y  M  M  H  F  H  L  *  T  P  S  K  P  N  Q  R  N  A  *  A  S  S  P  H  S  *  S  S  W  S  *  F  G  C  D  I  I  Q  S  I  G  *  L  S  R  S  C  R   : G  *  R  S  I  L  Q  Q  A  D  P  D  S  G  N  Q  M  H  D  T   : G  G  L  L  L  *  W   </first_frame>
            <second_frame>  V  R  A  S  I  L  *  R  D  D  D  I  F  F  K  G  F  S  F  L  *  G  *  C  L  S  S  I  N  R  L  N  I  L  S  P  L  L  H  A  T  L  L  R  L  L  P  S  F  T  N  L  F  F  L  Y  N  F  H  T  S  H  S  Y  S  *  L  S  K  M  E  H  *  R  Q  I  W  R  L  *  S  N  S  K  C  S  A  K  L  E  L  H  V  M  P  E  L  *  H  F  E  M  A  I  K  A  Y  I  W  Y  F  N  *  I  *  *  F  S  K  I  T  *  C  I  F  I  C  R  R  H  P  S  P  T  K  E  M  L  E  P  L  L  R  T  A  E  A  V  G  L  S  L  D  V  T  S  S  K  A  L  A  D  S  L  D  L  A  E  :  G  D  D  P  Y  F  N  K  L  I  R  I  L  A  T  R  C  M  T  Q  :  A  V  Y  F  C  S  G  </second_frame>
            <third_frame>   *  G  L  Q  F  F  E  G  T  M  T  Y  F  L  R  A  S  V  S  Y  R  G  D  A  C  L  V  L  T  G  L  T  Y  S  V  H  F  Y  M  Q  L  C  F  V  F  S  P  P  S  P  T  C  S  F  C  T  I  F  I  H  H  I  A  I  H  S  C  L  R  W  S  T  R  D  R  Y  G  G  S  S  R  I  P  S  V  P  L  N  S  N  Y  M  L  C  Q  S  C  D  T  L  K  W  L  *  K  L  T  F  G  T  S  I  K  F  D  N  S  P  R  L  H  D  A  F  S  F  V  D  A  I  Q  A  Q  P  K  K  C  L  S  L  F  S  A  Q  L  K  Q  L  V  L  V  W  M  *  H  H  P  K  H  W  L  T  L  *  I  L  P  R :   V  T  I  H  T  S  T  S  *  S  G  F  W  Q  P  D  A  *  H  R :   R  F  T  F  V  V  E </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0291P19.2" strand="+"/>
                <serials PGL_serial="19" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="107667" stop="107975"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>306</number_coding_nucleotides>
                  <number_encoded_amino_acids>102</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GLQFFEGTMTYFLRASVSYRGDACLVLTGLTYSVHFYMQLCFVFSPPSPTCSFCTIFIHHIAIHSCLRWSTRDRYGGSSRIPSVPLNSNYMLCQSCDTLKWL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0291P19.2" strand="+"/>
                <serials PGL_serial="19" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="108029" stop="108166"/>
                    <exon start="110001" stop="110060"/>
                    <exon start="110150" stop="110170"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>219</number_coding_nucleotides>
                  <number_encoded_amino_acids>73</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CIFICRRHPSPTKEMLEPLLRTAEAVGLSLDVTSSKALADSLDLAEGDDPYFNKLIRILATRCMTQAVYFCSG</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="106546" e_stop="106608"/>
            <exon e_start="106718" e_stop="106817"/>
            <exon e_start="107168" e_stop="107279"/>
            <exon e_start="108046" e_stop="108166"/>
            <exon e_start="110001" e_stop="110060"/>
            <exon e_start="110150" e_stop="110255"/>
            <exon e_start="110342" e_stop="110437"/>
            <exon e_start="111236" e_stop="111317"/>
            <exon e_start="111399" e_stop="111464"/>
            <exon e_start="111579" e_stop="112114"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.954" acc_prob="0.985" e_score="0.952"/>
          <exon-intron don_prob="0.825" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.964" acc_prob="0.988" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.958" e_score="1.000"/>
          <exon-intron don_prob="0.432" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.915" acc_prob="0.803" e_score="1.000"/>
          <exon-intron don_prob="0.990" acc_prob="0.995" e_score="0.989"/>
          <exon-intron don_prob="0.976" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.982" acc_prob="0.993" e_score="1.000"/>
          <exon-only e_score="0.979"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.952">
            <gDNA_exon_boundary e_start="106546" e_stop="106608" e_length="63"/>
          </exon>
          <intron i_serial="1" don_prob="0.954" acc_prob="0.985">
            <gDNA_intron_boundary i_start="106609" i_stop="106717" i_length="109"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="106718" e_stop="106817" e_length="100"/>
          </exon>
          <intron i_serial="2" don_prob="0.825" acc_prob="0.995">
            <gDNA_intron_boundary i_start="106818" i_stop="107167" i_length="350"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="107168" e_stop="107279" e_length="112"/>
          </exon>
          <intron i_serial="3" don_prob="0.964" acc_prob="0.988">
            <gDNA_intron_boundary i_start="107280" i_stop="108045" i_length="766"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="108046" e_stop="108166" e_length="121"/>
          </exon>
          <intron i_serial="4" don_prob="0.998" acc_prob="0.958">
            <gDNA_intron_boundary i_start="108167" i_stop="110000" i_length="1834"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="110001" e_stop="110060" e_length="60"/>
          </exon>
          <intron i_serial="5" don_prob="0.432" acc_prob="0.994">
            <gDNA_intron_boundary i_start="110061" i_stop="110149" i_length="89"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="110150" e_stop="110255" e_length="106"/>
          </exon>
          <intron i_serial="6" don_prob="0.915" acc_prob="0.803">
            <gDNA_intron_boundary i_start="110256" i_stop="110341" i_length="86"/>
          </intron>
          <exon e_serial="7" e_score="0.989">
            <gDNA_exon_boundary e_start="110342" e_stop="110437" e_length="96"/>
          </exon>
          <intron i_serial="7" don_prob="0.990" acc_prob="0.995">
            <gDNA_intron_boundary i_start="110438" i_stop="111235" i_length="798"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="111236" e_stop="111317" e_length="82"/>
          </exon>
          <intron i_serial="8" don_prob="0.976" acc_prob="0.997">
            <gDNA_intron_boundary i_start="111318" i_stop="111398" i_length="81"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="111399" e_stop="111464" e_length="66"/>
          </exon>
          <intron i_serial="9" don_prob="0.982" acc_prob="0.993">
            <gDNA_intron_boundary i_start="111465" i_stop="111578" i_length="114"/>
          </intron>
          <exon e_serial="10" e_score="0.979">
            <gDNA_exon_boundary e_start="111579" e_stop="112114" e_length="536"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="106546" stop="106608"/>
              <exon start="106718" stop="106817"/>
              <exon start="107168" stop="107279"/>
              <exon start="108046" stop="108166"/>
              <exon start="110001" stop="110060"/>
              <exon start="110150" stop="110255"/>
              <exon start="110342" stop="110380"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E272709" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="110351" stop="110437"/>
              <exon start="111236" stop="111317"/>
              <exon start="111399" stop="111464"/>
              <exon start="111579" stop="112100"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E544296" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="111450" stop="111464"/>
              <exon start="111579" stop="112114"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E392688" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="111612" stop="112086"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E257634" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="111621" stop="112088"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E231751" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="111737" stop="112080"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E349862" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="19" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TATTCCAGTCGCTTGGTGGATCCAATAACTTCAGATTTACGAAATTTGAATGGGTTAGCCAAG : ATAATGAGGCAAAGACGCATTGATAGGGGTGCACTGACACTTGCTTCTGCTGAAGTCAAATTTCAGATTGATACTGAAACTCATGACCCTCTTGATATTG : GAATGTATCAGATTCGTGAAGCAAACCAAATGGTTGAGGAGTTTATGCTTGCTGCTAATGTTGCAGTTGCTGAAAAAATCCTTAAGCATTTTCCTGTCTGCTCACTATTAAG : ACGCCATCCAAGCCCAACCAAAGAAATGCTTGAGCCTCTTCTCCGCACAGCTGAAGCAGTTGGTCTTAGTTTGGATGTGACATCATCCAAAGCATTGGCTGACTCTCTAGATCTTGCCGAG : GGTGACGATCCATACTTCAACAAGCTGATCCGGATTCTGGCAACCAGATGCATGACACAG : GCGGTTTACTTTTGTAGTGGAGACCTTAGTCCTCCTGAATATCTTCATTATGGTCTTGCCTCTCCTCTTTATACTCATTTCACCTCGCCCATTAGAAGATATGCTG : ATGTCATCGTCCATCGATTGCTTGCTGCTTCTTTGGGAATTTATCAGCTTCCTGGTGTGTTCCAAGATAGACCCAAGCTAACTAGTATTTCTGACA : ATCTAAATTATCGGCATAGAAATGCTCAGATGGCCAGCAGAGCATCAGTAGAGCTCCATACTCTCATTTTCTTCAGGAAGCG : ACCAACAGATACCGAGGCGAGAATAGTTAAAATAAGATCCAATGGCTTCATTGTCTTTGTGCCCAA : GTATGGTATTGAAGGGCCTGTATACTTGACGTCTAAAGGGGACAATGGAGGGGAATGGGTAGTCGATGAGAAACAACAGAAAATTAGAAAGCTTGATGGAAGTGTTTCGTATGGTGTACTTGGAACAGTGAGAATTCACATGGAAGTCGTTGAGCCTCAGCCTAATCGACCTAAACTACAACTTACCCTTGTATCAGACCGATAACTTTACCAAGAAAGTGGAGGTCGATATCATGTATCATGTAGTCTTTATTCCAGTGTGATAGTTGAATTGTTCTTTAACGGACATTTGTGTATCATTAGATCGATGCAGCTCCATTAAATGCTTCAAAAACATTTATAGTTATTCTTTTATTATATGTTACATAAATGTTCTAAAGTGTAACTTACGTGGTTACCATAGACTGAGATATTCAGTGGTGTATTTAGGTTTCGAAAAAATGTGTGTACTATTACGAAATGATGCATTTAAGATATAAATTTGATTGATTTGACCTTTACATTCTTAATATTAAACTGTTAATTTTTTAAAATTA</gDNA_template>
            <first_frame> Y  S  S  R  L  V  D  P  I  T  S  D  L  R  N  L  N  G  L  A  K  :  I  M  R  Q  R  R  I  D  R  G  A  L  T  L  A  S  A  E  V  K  F  Q  I  D  T  E  T  H  D  P  L  D  I   : G  M  Y  Q  I  R  E  A  N  Q  M  V  E  E  F  M  L  A  A  N  V  A  V  A  E  K  I  L  K  H  F  P  V  C  S  L  L  R :   R  H  P  S  P  T  K  E  M  L  E  P  L  L  R  T  A  E  A  V  G  L  S  L  D  V  T  S  S  K  A  L  A  D  S  L  D  L  A  E  :  G  D  D  P  Y  F  N  K  L  I  R  I  L  A  T  R  C  M  T  Q  :  A  V  Y  F  C  S  G  D  L  S  P  P  E  Y  L  H  Y  G  L  A  S  P  L  Y  T  H  F  T  S  P  I  R  R  Y  A   : D  V  I  V  H  R  L  L  A  A  S  L  G  I  Y  Q  L  P  G  V  F  Q  D  R  P  K  L  T  S  I  S  D   : N  L  N  Y  R  H  R  N  A  Q  M  A  S  R  A  S  V  E  L  H  T  L  I  F  F  R  K  R :   P  T  D  T  E  A  R  I  V  K  I  R  S  N  G  F  I  V  F  V  P  K :   Y  G  I  E  G  P  V  Y  L  T  S  K  G  D  N  G  G  E  W  V  V  D  E  K  Q  Q  K  I  R  K  L  D  G  S  V  S  Y  G  V  L  G  T  V  R  I  H  M  E  V  V  E  P  Q  P  N  R  P  K  L  Q  L  T  L  V  S  D  R  *  L  Y  Q  E  S  G  G  R  Y  H  V  S  C  S  L  Y  S  S  V  I  V  E  L  F  F  N  G  H  L  C  I  I  R  S  M  Q  L  H  *  M  L  Q  K  H  L  *  L  F  F  Y  Y  M  L  H  K  C  S  K  V  *  L  T  W  L  P  *  T  E  I  F  S  G  V  F  R  F  R  K  N  V  C  T  I  T  K  *  C  I  *  D  I  N  L  I  D  L  T  F  T  F  L  I  L  N  C  *  F  F  K  I  </first_frame>
            <second_frame>  I  P  V  A  W  W  I  Q  *  L  Q  I  Y  E  I  *  M  G  *  P  R :   *  *  G  K  D  A  L  I  G  V  H  *  H  L  L  L  L  K  S  N  F  R  L  I  L  K  L  M  T  L  L  I  L  :  E  C  I  R  F  V  K  Q  T  K  W  L  R  S  L  C  L  L  L  M  L  Q  L  L  K  K  S  L  S  I  F  L  S  A  H  Y  *   : D  A  I  Q  A  Q  P  K  K  C  L  S  L  F  S  A  Q  L  K  Q  L  V  L  V  W  M  *  H  H  P  K  H  W  L  T  L  *  I  L  P  R :   V  T  I  H  T  S  T  S  *  S  G  F  W  Q  P  D  A  *  H  R :   R  F  T  F  V  V  E  T  L  V  L  L  N  I  F  I  M  V  L  P  L  L  F  I  L  I  S  P  R  P  L  E  D  M  L  :  M  S  S  S  I  D  C  L  L  L  L  W  E  F  I  S  F  L  V  C  S  K  I  D  P  S  *  L  V  F  L  T  :  I  *  I  I  G  I  E  M  L  R  W  P  A  E  H  Q  *  S  S  I  L  S  F  S  S  G  S   : D  Q  Q  I  P  R  R  E  *  L  K  *  D  P  M  A  S  L  S  L  C  P   : S  M  V  L  K  G  L  Y  T  *  R  L  K  G  T  M  E  G  N  G  *  S  M  R  N  N  R  K  L  E  S  L  M  E  V  F  R  M  V  Y  L  E  Q  *  E  F  T  W  K  S  L  S  L  S  L  I  D  L  N  Y  N  L  P  L  Y  Q  T  D  N  F  T  K  K  V  E  V  D  I  M  Y  H  V  V  F  I  P  V  *  *  L  N  C  S  L  T  D  I  C  V  S  L  D  R  C  S  S  I  K  C  F  K  N  I  Y  S  Y  S  F  I  I  C  Y  I  N  V  L  K  C  N  L  R  G  Y  H  R  L  R  Y  S  V  V  Y  L  G  F  E  K  M  C  V  L  L  R  N  D  A  F  K  I  *  I  *  L  I  *  P  L  H  S  *  Y  *  T  V  N  F  L  K  L </second_frame>
            <third_frame>   F  Q  S  L  G  G  S  N  N  F  R  F  T  K  F  E  W  V  S  Q   : D  N  E  A  K  T  H  *  *  G  C  T  D  T  C  F  C  *  S  Q  I  S  D  *  Y  *  N  S  *  P  S  *  Y  W :   N  V  S  D  S  *  S  K  P  N  G  *  G  V  Y  A  C  C  *  C  C  S  C  *  K  N  P  *  A  F  S  C  L  L  T  I  K  :  T  P  S  K  P  N  Q  R  N  A  *  A  S  S  P  H  S  *  S  S  W  S  *  F  G  C  D  I  I  Q  S  I  G  *  L  S  R  S  C  R   : G  *  R  S  I  L  Q  Q  A  D  P  D  S  G  N  Q  M  H  D  T   : G  G  L  L  L  *  W  R  P  *  S  S  *  I  S  S  L  W  S  C  L  S  S  L  Y  S  F  H  L  A  H  *  K  I  C  * :   C  H  R  P  S  I  A  C  C  F  F  G  N  L  S  A  S  W  C  V  P  R  *  T  Q  A  N  *  Y  F  *  Q :   S  K  L  S  A  *  K  C  S  D  G  Q  Q  S  I  S  R  A  P  Y  S  H  F  L  Q  E  A  :  T  N  R  Y  R  G  E  N  S  *  N  K  I  Q  W  L  H  C  L  C  A  Q  :  V  W  Y  *  R  A  C  I  L  D  V  *  R  G  Q  W  R  G  M  G  S  R  *  E  T  T  E  N  *  K  A  *  W  K  C  F  V  W  C  T  W  N  S  E  N  S  H  G  S  R  *  A  S  A  *  S  T  *  T  T  T  Y  P  C  I  R  P  I  T  L  P  R  K  W  R  S  I  S  C  I  M  *  S  L  F  Q  C  D  S  *  I  V  L  *  R  T  F  V  Y  H  *  I  D  A  A  P  L  N  A  S  K  T  F  I  V  I  L  L  L  Y  V  T  *  M  F  *  S  V  T  Y  V  V  T  I  D  *  D  I  Q  W  C  I  *  V  S  K  K  C  V  Y  Y  Y  E  M  M  H  L  R  Y  K  F  D  *  F  D  L  Y  I  L  N  I  K  L  L  I  F  *  N   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0291P19.2" strand="+"/>
                <serials PGL_serial="19" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="106546" stop="106608"/>
                    <exon start="106718" stop="106817"/>
                    <exon start="107168" stop="107279"/>
                    <exon start="108046" stop="108166"/>
                    <exon start="110001" stop="110060"/>
                    <exon start="110150" stop="110255"/>
                    <exon start="110342" stop="110437"/>
                    <exon start="111236" stop="111317"/>
                    <exon start="111399" stop="111464"/>
                    <exon start="111579" stop="111783"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1008</number_coding_nucleotides>
                  <number_encoded_amino_acids>336</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>YSSRLVDPITSDLRNLNGLAKIMRQRRIDRGALTLASAEVKFQIDTETHDPLDIGMYQIREANQMVEEFMLAANVAVAEKILKHFPVCSLLRRHPSPTKEMLEPLLRTAEAVGLSLDVTSSKALADSLDLAEGDDPYFNKLIRILATRCMTQAVYFCSGDLSPPEYLHYGLASPLYTHFTSPIRRYADVIVHRLLAASLGIYQLPGVFQDRPKLTSISDNLNYRHRNAQMASRASVELHTLIFFRKRPTDTEARIVKIRSNGFIVFVPKYGIEGPVYLTSKGDNGGEWVVDEKQQKIRKLDGSVSYGVLGTVRIHMEVVEPQPNRPKLQLTLVSDR*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0291P19.2" strand="+"/>
                <serials PGL_serial="19" AGS_serial="3" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="111845" stop="112057"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>210</number_coding_nucleotides>
                  <number_encoded_amino_acids>70</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LNCSLTDICVSLDRCSSIKCFKNIYSYSFIICYINVLKCNLRGYHRLRYSVVYLGFEKMCVLLRNDAFKI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="4">
          <exon_coordinates>
            <exon e_start="111167" e_stop="111167"/>
            <exon e_start="111236" e_stop="111317"/>
            <exon e_start="111399" e_stop="111464"/>
            <exon e_start="111579" e_stop="112114"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.725" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.976" acc_prob="0.997" e_score="0.988"/>
          <exon-intron don_prob="0.982" acc_prob="0.993" e_score="1.000"/>
          <exon-only e_score="0.944"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="111167" e_stop="111167" e_length="1"/>
          </exon>
          <intron i_serial="1" don_prob="0.725" acc_prob="0.995">
            <gDNA_intron_boundary i_start="111168" i_stop="111235" i_length="68"/>
          </intron>
          <exon e_serial="2" e_score="0.988">
            <gDNA_exon_boundary e_start="111236" e_stop="111317" e_length="82"/>
          </exon>
          <intron i_serial="2" don_prob="0.976" acc_prob="0.997">
            <gDNA_intron_boundary i_start="111318" i_stop="111398" i_length="81"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="111399" e_stop="111464" e_length="66"/>
          </exon>
          <intron i_serial="3" don_prob="0.982" acc_prob="0.993">
            <gDNA_intron_boundary i_start="111465" i_stop="111578" i_length="114"/>
          </intron>
          <exon e_serial="4" e_score="0.944">
            <gDNA_exon_boundary e_start="111579" e_stop="112114" e_length="536"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="111167" stop="111167"/>
              <exon start="111236" stop="111317"/>
              <exon start="111399" stop="111464"/>
              <exon start="111579" stop="112079"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E242597" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="111450" stop="111464"/>
              <exon start="111579" stop="112114"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E392688" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="111612" stop="112086"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E257634" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="111621" stop="112088"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E231751" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="111737" stop="112080"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E349862" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="19" AGS_serial="4" gDNA_strand="+"/>
          <translation>
            <gDNA_template>A : ATCTAAATTATCGGCATAGAAATGCTCAGATGGCCAGCAGAGCATCAGTAGAGCTCCATACTCTCATTTTCTTCAGGAAGCG : ACCAACAGATACCGAGGCGAGAATAGTTAAAATAAGATCCAATGGCTTCATTGTCTTTGTGCCCAA : GTATGGTATTGAAGGGCCTGTATACTTGACGTCTAAAGGGGACAATGGAGGGGAATGGGTAGTCGATGAGAAACAACAGAAAATTAGAAAGCTTGATGGAAGTGTTTCGTATGGTGTACTTGGAACAGTGAGAATTCACATGGAAGTCGTTGAGCCTCAGCCTAATCGACCTAAACTACAACTTACCCTTGTATCAGACCGATAACTTTACCAAGAAAGTGGAGGTCGATATCATGTATCATGTAGTCTTTATTCCAGTGTGATAGTTGAATTGTTCTTTAACGGACATTTGTGTATCATTAGATCGATGCAGCTCCATTAAATGCTTCAAAAACATTTATAGTTATTCTTTTATTATATGTTACATAAATGTTCTAAAGTGTAACTTACGTGGTTACCATAGACTGAGATATTCAGTGGTGTATTTAGGTTTCGAAAAAATGTGTGTACTATTACGAAATGATGCATTTAAGATATAAATTTGATTGATTTGACCTTTACATTCTTAATATTAAACTGTTAATTTTTTAAAATTA</gDNA_template>
            <first_frame>  : N  L  N  Y  R  H  R  N  A  Q  M  A  S  R  A  S  V  E  L  H  T  L  I  F  F  R  K  R :   P  T  D  T  E  A  R  I  V  K  I  R  S  N  G  F  I  V  F  V  P  K :   Y  G  I  E  G  P  V  Y  L  T  S  K  G  D  N  G  G  E  W  V  V  D  E  K  Q  Q  K  I  R  K  L  D  G  S  V  S  Y  G  V  L  G  T  V  R  I  H  M  E  V  V  E  P  Q  P  N  R  P  K  L  Q  L  T  L  V  S  D  R  *  L  Y  Q  E  S  G  G  R  Y  H  V  S  C  S  L  Y  S  S  V  I  V  E  L  F  F  N  G  H  L  C  I  I  R  S  M  Q  L  H  *  M  L  Q  K  H  L  *  L  F  F  Y  Y  M  L  H  K  C  S  K  V  *  L  T  W  L  P  *  T  E  I  F  S  G  V  F  R  F  R  K  N  V  C  T  I  T  K  *  C  I  *  D  I  N  L  I  D  L  T  F  T  F  L  I  L  N  C  *  F  F  K  I  </first_frame>
            <second_frame>  :  I  *  I  I  G  I  E  M  L  R  W  P  A  E  H  Q  *  S  S  I  L  S  F  S  S  G  S   : D  Q  Q  I  P  R  R  E  *  L  K  *  D  P  M  A  S  L  S  L  C  P   : S  M  V  L  K  G  L  Y  T  *  R  L  K  G  T  M  E  G  N  G  *  S  M  R  N  N  R  K  L  E  S  L  M  E  V  F  R  M  V  Y  L  E  Q  *  E  F  T  W  K  S  L  S  L  S  L  I  D  L  N  Y  N  L  P  L  Y  Q  T  D  N  F  T  K  K  V  E  V  D  I  M  Y  H  V  V  F  I  P  V  *  *  L  N  C  S  L  T  D  I  C  V  S  L  D  R  C  S  S  I  K  C  F  K  N  I  Y  S  Y  S  F  I  I  C  Y  I  N  V  L  K  C  N  L  R  G  Y  H  R  L  R  Y  S  V  V  Y  L  G  F  E  K  M  C  V  L  L  R  N  D  A  F  K  I  *  I  *  L  I  *  P  L  H  S  *  Y  *  T  V  N  F  L  K  L </second_frame>
            <third_frame>  :   S  K  L  S  A  *  K  C  S  D  G  Q  Q  S  I  S  R  A  P  Y  S  H  F  L  Q  E  A  :  T  N  R  Y  R  G  E  N  S  *  N  K  I  Q  W  L  H  C  L  C  A  Q  :  V  W  Y  *  R  A  C  I  L  D  V  *  R  G  Q  W  R  G  M  G  S  R  *  E  T  T  E  N  *  K  A  *  W  K  C  F  V  W  C  T  W  N  S  E  N  S  H  G  S  R  *  A  S  A  *  S  T  *  T  T  T  Y  P  C  I  R  P  I  T  L  P  R  K  W  R  S  I  S  C  I  M  *  S  L  F  Q  C  D  S  *  I  V  L  *  R  T  F  V  Y  H  *  I  D  A  A  P  L  N  A  S  K  T  F  I  V  I  L  L  L  Y  V  T  *  M  F  *  S  V  T  Y  V  V  T  I  D  *  D  I  Q  W  C  I  *  V  S  K  K  C  V  Y  Y  Y  E  M  M  H  L  R  Y  K  F  D  *  F  D  L  Y  I  L  N  I  K  L  L  I  F  *  N   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0291P19.2" strand="+"/>
                <serials PGL_serial="19" AGS_serial="4" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="111167" stop="111317"/>
                    <exon start="111399" stop="111464"/>
                    <exon start="111579" stop="111783"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>351</number_coding_nucleotides>
                  <number_encoded_amino_acids>117</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NLNYRHRNAQMASRASVELHTLIFFRKRPTDTEARIVKIRSNGFIVFVPKYGIEGPVYLTSKGDNGGEWVVDEKQQKIRKLDGSVSYGVLGTVRIHMEVVEPQPNRPKLQLTLVSDR*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0291P19.2" strand="+"/>
                <serials PGL_serial="19" AGS_serial="4" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="111845" stop="112057"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>210</number_coding_nucleotides>
                  <number_encoded_amino_acids>70</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LNCSLTDICVSLDRCSSIKCFKNIYSYSFIICYINVLKCNLRGYHRLRYSVVYLGFEKMCVLLRNDAFKI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="20" PGL_strand="-" PGL_start="117843" PGL_stop="114179"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="117829" e_stop="117743"/>
            <exon e_start="116371" e_stop="116103"/>
            <exon e_start="116018" e_stop="115939"/>
            <exon e_start="115861" e_stop="115737"/>
            <exon e_start="115605" e_stop="115484"/>
            <exon e_start="115389" e_stop="115099"/>
            <exon e_start="115004" e_stop="114904"/>
            <exon e_start="114228" e_stop="114193"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.999" e_score="0.989"/>
          <exon-intron don_prob="1.000" acc_prob="0.902" e_score="1.000"/>
          <exon-intron don_prob="0.976" acc_prob="0.990" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.595" e_score="1.000"/>
          <exon-intron don_prob="0.969" acc_prob="0.679" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.887" e_score="1.000"/>
          <exon-intron don_prob="0.721" acc_prob="0.906" e_score="0.980"/>
          <exon-only e_score="0.944"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.989">
            <gDNA_exon_boundary e_start="117829" e_stop="117743" e_length="87"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.999">
            <gDNA_intron_boundary i_start="117742" i_stop="116372" i_length="1371"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="116371" e_stop="116103" e_length="269"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="0.902">
            <gDNA_intron_boundary i_start="116102" i_stop="116019" i_length="84"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="116018" e_stop="115939" e_length="80"/>
          </exon>
          <intron i_serial="3" don_prob="0.976" acc_prob="0.990">
            <gDNA_intron_boundary i_start="115938" i_stop="115862" i_length="77"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="115861" e_stop="115737" e_length="125"/>
          </exon>
          <intron i_serial="4" don_prob="0.000" acc_prob="0.595">
            <gDNA_intron_boundary i_start="115736" i_stop="115606" i_length="131"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="115605" e_stop="115484" e_length="122"/>
          </exon>
          <intron i_serial="5" don_prob="0.969" acc_prob="0.679">
            <gDNA_intron_boundary i_start="115483" i_stop="115390" i_length="94"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="115389" e_stop="115099" e_length="291"/>
          </exon>
          <intron i_serial="6" don_prob="0.999" acc_prob="0.887">
            <gDNA_intron_boundary i_start="115098" i_stop="115005" i_length="94"/>
          </intron>
          <exon e_serial="7" e_score="0.980">
            <gDNA_exon_boundary e_start="115004" e_stop="114904" e_length="101"/>
          </exon>
          <intron i_serial="7" don_prob="0.721" acc_prob="0.906">
            <gDNA_intron_boundary i_start="114903" i_stop="114229" i_length="675"/>
          </intron>
          <exon e_serial="8" e_score="0.944">
            <gDNA_exon_boundary e_start="114228" e_stop="114193" e_length="36"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="117829" stop="117743"/>
              <exon start="116371" stop="116103"/>
              <exon start="116018" stop="115939"/>
              <exon start="115861" stop="115737"/>
              <exon start="115605" stop="115484"/>
              <exon start="115389" stop="115352"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E332223" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="116209" stop="116103"/>
              <exon start="116018" stop="115939"/>
              <exon start="115861" stop="115737"/>
              <exon start="115605" stop="115484"/>
              <exon start="115389" stop="115099"/>
              <exon start="115004" stop="114960"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E555274" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="116209" stop="116103"/>
              <exon start="116018" stop="115939"/>
              <exon start="115861" stop="115737"/>
              <exon start="115605" stop="115484"/>
              <exon start="115389" stop="115103"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E552455" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="115851" stop="115737"/>
              <exon start="115605" stop="115484"/>
              <exon start="115389" stop="115099"/>
              <exon start="115004" stop="114904"/>
              <exon start="114228" stop="114193"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E316836" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="20" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTTTTGAACTTCATTTTTTTTTCTTTATCGTCGTATTTATCGATTTATGTTAGAAGAAAAAACTCGGATTGAAAAAAATAATTCCAG : GATATAGATAGAGACAGTTTATTAAAAAAAAAAAAGAAGAAGACATTTTTGAAACTCCCTATTTTAGACGTTACAACTAGCAAATAACATACATTTTTTATCAACAAAATTTTGCAAAAAGAAAAAAGAAAAAAATGGGGTTTATGACATTATTAGAAGTGGCATCAATGCCAATATTGCAAGTGCTAATAGTAAGTGGTTTAGGAGCTGTAATGGCCACTGATTATCTTAAGCTACTTCCTGCTGATGCCCGCAAATACCTTAACAGA : ATAGTTTTTGTGATATTTACACCGGCTTTGATGTTTGCGAGTTTGGCAGAGTCTGTCACCTTTCAAGATATCATCACATG : GTGGTTTATGCCGGTTAATGTTGGATTAACATTTCTATTTGGAGGGATTCTTGGATGGATAGCTATGAAAATATTGAAACCAAAGCCACATCTTGAGGGACTCATTATTGCTACATGCTCATCAG : GAAACTTGGGAAATCTTCTTTTGATTGTCATTCCTGCAATTTGCAAAGAAGATGGAAGTCCATTTGGTGATCATAAAACTTGTGCTTCTGTTGGCCTTTCGTATGCATCTTTCTCAATGGCC : CTTGGAGGTTTCTACATTTGGACATTCACTTATCAGCTAATAAGAAATTCATCCTTGAAATTCAAATCACTAAAAACAGCAGAGGAAAACGAAGCGTTCAAGGGACCAAATGTGGACTCAGAGACAAATGAAAAGTCTTGCCTTCTCGACAACAATTCTCAAGATCAACTTCCTATTAGTACCACAAAAACAACTGAAAATCAAACAGTAGAAGTATCATCGTGGCGAAAAATAGTAGGTGTGGTACACACTTTCTTAGAAGAAATAACAGCACCTCCAACTCTTGGAGCT : ATTGTAGGATTCCTGTTTGGTTCAGTTACATGGCTGAAAAACCTGGTGATTGGGGATGCCGCTCCTCTTAGAGTTATTCAAGACTCTGTTAAGTTACTTGG : GGATGGAACCATTCCATGCATCACTCTTATACTTGG</gDNA_template>
            <first_frame> F  L  N  F  I  F  F  S  L  S  S  Y  L  S  I  Y  V  R  R  K  N  S  D  *  K  K  *  F  Q  :  D  I  D  R  D  S  L  L  K  K  K  K  K  K  T  F  L  K  L  P  I  L  D  V  T  T  S  K  *  H  T  F  F  I  N  K  I  L  Q  K  E  K  R  K  K  W  G  L  *  H  Y  *  K  W  H  Q  C  Q  Y  C  K  C  *  *  *  V  V  *  E  L  *  W  P  L  I  I  L  S  Y  F  L  L  M  P  A  N  T  L  T  E :   *  F  L  *  Y  L  H  R  L  *  C  L  R  V  W  Q  S  L  S  P  F  K  I  S  S  H   : G  G  L  C  R  L  M  L  D  *  H  F  Y  L  E  G  F  L  D  G  *  L  *  K  Y  *  N  Q  S  H  I  L  R  D  S  L  L  L  H  A  H  Q  :  E  T  W  E  I  F  F  *  L  S  F  L  Q  F  A  K  K  M  E  V  H  L  V  I  I  K  L  V  L  L  L  A  F  R  M  H  L  S  Q  W  P :   L  E  V  S  T  F  G  H  S  L  I  S  *  *  E  I  H  P  *  N  S  N  H  *  K  Q  Q  R  K  T  K  R  S  R  D  Q  M  W  T  Q  R  Q  M  K  S  L  A  F  S  T  T  I  L  K  I  N  F  L  L  V  P  Q  K  Q  L  K  I  K  Q  *  K  Y  H  R  G  E  K  *  *  V  W  Y  T  L  S  *  K  K  *  Q  H  L  Q  L  L  E  L :   L  *  D  S  C  L  V  Q  L  H  G  *  K  T  W  *  L  G  M  P  L  L  L  E  L  F  K  T  L  L  S  Y  L   : G  M  E  P  F  H  A  S  L  L  Y  L  </first_frame>
            <second_frame>  F  *  T  S  F  F  F  L  Y  R  R  I  Y  R  F  M  L  E  E  K  T  R  I  E  K  N  N  S  R :   I  *  I  E  T  V  Y  *  K  K  K  R  R  R  H  F  *  N  S  L  F  *  T  L  Q  L  A  N  N  I  H  F  L  S  T  K  F  C  K  K  K  K  E  K  N  G  V  Y  D  I  I  R  S  G  I  N  A  N  I  A  S  A  N  S  K  W  F  R  S  C  N  G  H  *  L  S  *  A  T  S  C  *  C  P  Q  I  P  *  Q   : N  S  F  C  D  I  Y  T  G  F  D  V  C  E  F  G  R  V  C  H  L  S  R  Y  H  H  M  :  V  V  Y  A  G  *  C  W  I  N  I  S  I  W  R  D  S  W  M  D  S  Y  E  N  I  E  T  K  A  T  S  *  G  T  H  Y  C  Y  M  L  I  R :   K  L  G  K  S  S  F  D  C  H  S  C  N  L  Q  R  R  W  K  S  I  W  *  S  *  N  L  C  F  C  W  P  F  V  C  I  F  L  N  G   : P  W  R  F  L  H  L  D  I  H  L  S  A  N  K  K  F  I  L  E  I  Q  I  T  K  N  S  R  G  K  R  S  V  Q  G  T  K  C  G  L  R  D  K  *  K  V  L  P  S  R  Q  Q  F  S  R  S  T  S  Y  *  Y  H  K  N  N  *  K  S  N  S  R  S  I  I  V  A  K  N  S  R  C  G  T  H  F  L  R  R  N  N  S  T  S  N  S  W  S   : Y  C  R  I  P  V  W  F  S  Y  M  A  E  K  P  G  D  W  G  C  R  S  S  *  S  Y  S  R  L  C  *  V  T  W  :  G  W  N  H  S  M  H  H  S  Y  T  W </second_frame>
            <third_frame>   F  E  L  H  F  F  F  F  I  V  V  F  I  D  L  C  *  K  K  K  L  G  L  K  K  I  I  P   : G  Y  R  *  R  Q  F  I  K  K  K  K  E  E  D  I  F  E  T  P  Y  F  R  R  Y  N  *  Q  I  T  Y  I  F  Y  Q  Q  N  F  A  K  R  K  K  K  K  M  G  F  M  T  L  L  E  V  A  S  M  P  I  L  Q  V  L  I  V  S  G  L  G  A  V  M  A  T  D  Y  L  K  L  L  P  A  D  A  R  K  Y  L  N  R  :  I  V  F  V  I  F  T  P  A  L  M  F  A  S  L  A  E  S  V  T  F  Q  D  I  I  T  W :   W  F  M  P  V  N  V  G  L  T  F  L  F  G  G  I  L  G  W  I  A  M  K  I  L  K  P  K  P  H  L  E  G  L  I  I  A  T  C  S  S   : G  N  L  G  N  L  L  L  I  V  I  P  A  I  C  K  E  D  G  S  P  F  G  D  H  K  T  C  A  S  V  G  L  S  Y  A  S  F  S  M  A  :  L  G  G  F  Y  I  W  T  F  T  Y  Q  L  I  R  N  S  S  L  K  F  K  S  L  K  T  A  E  E  N  E  A  F  K  G  P  N  V  D  S  E  T  N  E  K  S  C  L  L  D  N  N  S  Q  D  Q  L  P  I  S  T  T  K  T  T  E  N  Q  T  V  E  V  S  S  W  R  K  I  V  G  V  V  H  T  F  L  E  E  I  T  A  P  P  T  L  G  A  :  I  V  G  F  L  F  G  S  V  T  W  L  K  N  L  V  I  G  D  A  A  P  L  R  V  I  Q  D  S  V  K  L  L  G :   D  G  T  I  P  C  I  T  L  I  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0291P19.2" strand="-"/>
                <serials PGL_serial="20" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="116291" stop="116103"/>
                    <exon start="116018" stop="115939"/>
                    <exon start="115861" stop="115737"/>
                    <exon start="115605" stop="115484"/>
                    <exon start="115389" stop="115099"/>
                    <exon start="115004" stop="114904"/>
                    <exon start="114228" stop="114195"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>942</number_coding_nucleotides>
                  <number_encoded_amino_acids>314</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QITYIFYQQNFAKRKKKKMGFMTLLEVASMPILQVLIVSGLGAVMATDYLKLLPADARKYLNRIVFVIFTPALMFASLAESVTFQDIITWWFMPVNVGLTFLFGGILGWIAMKILKPKPHLEGLIIATCSSGNLGNLLLIVIPAICKEDGSPFGDHKTCASVGLSYASFSMALGGFYIWTFTYQLIRNSSLKFKSLKTAEENEAFKGPNVDSETNEKSCLLDNNSQDQLPISTTKTTENQTVEVSSWRKIVGVVHTFLEEITAPPTLGAIVGFLFGSVTWLKNLVIGDAAPLRVIQDSVKLLGDGTIPCITLIL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="117843" e_stop="117264"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.990"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.990">
            <gDNA_exon_boundary e_start="117843" e_stop="117264" e_length="580"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="117843" stop="117264"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E368189" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="117843" stop="117446"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E233550" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="117843" stop="117446"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E240904" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="117843" stop="117495"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E228025" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="20" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTCTTCCTATAATATTTTTGAACTTCATTTTTTTTTCTTTATCGTCGTATTTATCGATTTATGTTAGAAGAAAAAACTCGGATTGAAAAAAATAATTCCAGGTTCGTTTTCTTATCTCTCTTGATGATTTTATTTTTCTTTTTAGTCTGAGGTGATTTGGAATTTATATAAGATGCATGAATTAATCTTATTCTTGTTTGCGTTCATTAGAACTCTTTGTTTTTCATTTCTTATTATGAAAAATGAAGATGGCTAGAATATTAAAAAAAATATATATATATAAGAACGAGAGCAGATTTTTTAAAGTTGTAAAAAAGTTTATTTTTTTATTTGTGTAAAAATGGGAATGTGTTGGTGTTTCTAAAGGTAATTTATTGTATTTACTAATATTTTATTTTGTAGGTTTGATATGAACAATGAAGATTTTTTGTAAGCTTAAACGTTACGTTTTCCTGACATTTAGGTTAACACAAATAATACTGTTTAGATAAGTTTAATCTTTTTGGAAATAGGTGTTTGGCTAAGCTAAACTTTTGAGAATTCACAAAAGCTAAAAAAAAAAAATGAATGATGATAAAAA</gDNA_template>
            <first_frame> F  F  L  *  Y  F  *  T  S  F  F  F  L  Y  R  R  I  Y  R  F  M  L  E  E  K  T  R  I  E  K  N  N  S  R  F  V  F  L  S  L  L  M  I  L  F  F  F  L  V  *  G  D  L  E  F  I  *  D  A  *  I  N  L  I  L  V  C  V  H  *  N  S  L  F  F  I  S  Y  Y  E  K  *  R  W  L  E  Y  *  K  K  Y  I  Y  I  R  T  R  A  D  F  L  K  L  *  K  S  L  F  F  Y  L  C  K  N  G  N  V  L  V  F  L  K  V  I  Y  C  I  Y  *  Y  F  I  L  *  V  *  Y  E  Q  *  R  F  F  V  S  L  N  V  T  F  S  *  H  L  G  *  H  K  *  Y  C  L  D  K  F  N  L  F  G  N  R  C  L  A  K  L  N  F  *  E  F  T  K  A  K  K  K  K  *  M  M  I  K  </first_frame>
            <second_frame>  S  S  Y  N  I  F  E  L  H  F  F  F  F  I  V  V  F  I  D  L  C  *  K  K  K  L  G  L  K  K  I  I  P  G  S  F  S  Y  L  S  *  *  F  Y  F  S  F  *  S  E  V  I  W  N  L  Y  K  M  H  E  L  I  L  F  L  F  A  F  I  R  T  L  C  F  S  F  L  I  M  K  N  E  D  G  *  N  I  K  K  N  I  Y  I  *  E  R  E  Q  I  F  *  S  C  K  K  V  Y  F  F  I  C  V  K  M  G  M  C  W  C  F  *  R  *  F  I  V  F  T  N  I  L  F  C  R  F  D  M  N  N  E  D  F  L  *  A  *  T  L  R  F  P  D  I  *  V  N  T  N  N  T  V  *  I  S  L  I  F  L  E  I  G  V  W  L  S  *  T  F  E  N  S  Q  K  L  K  K  K  N  E  *  *  *  K </second_frame>
            <third_frame>   L  P  I  I  F  L  N  F  I  F  F  S  L  S  S  Y  L  S  I  Y  V  R  R  K  N  S  D  *  K  K  *  F  Q  V  R  F  L  I  S  L  D  D  F  I  F  L  F  S  L  R  *  F  G  I  Y  I  R  C  M  N  *  S  Y  S  C  L  R  S  L  E  L  F  V  F  H  F  L  L  *  K  M  K  M  A  R  I  L  K  K  I  Y  I  Y  K  N  E  S  R  F  F  K  V  V  K  K  F  I  F  L  F  V  *  K  W  E  C  V  G  V  S  K  G  N  L  L  Y  L  L  I  F  Y  F  V  G  L  I  *  T  M  K  I  F  C  K  L  K  R  Y  V  F  L  T  F  R  L  T  Q  I  I  L  F  R  *  V  *  S  F  W  K  *  V  F  G  *  A  K  L  L  R  I  H  K  S  *  K  K  K  M  N  D  D  K   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0291P19.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="117829" e_stop="117743"/>
            <exon e_start="116371" e_stop="116103"/>
            <exon e_start="116018" e_stop="115939"/>
            <exon e_start="115861" e_stop="115737"/>
            <exon e_start="115605" e_stop="115484"/>
            <exon e_start="115389" e_stop="115152"/>
            <exon e_start="115004" e_stop="114904"/>
            <exon e_start="114228" e_stop="114179"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.999" e_score="0.989"/>
          <exon-intron don_prob="1.000" acc_prob="0.902" e_score="1.000"/>
          <exon-intron don_prob="0.976" acc_prob="0.990" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.595" e_score="1.000"/>
          <exon-intron don_prob="0.969" acc_prob="0.679" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.887" e_score="1.000"/>
          <exon-intron don_prob="0.721" acc_prob="0.906" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.989">
            <gDNA_exon_boundary e_start="117829" e_stop="117743" e_length="87"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.999">
            <gDNA_intron_boundary i_start="117742" i_stop="116372" i_length="1371"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="116371" e_stop="116103" e_length="269"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="0.902">
            <gDNA_intron_boundary i_start="116102" i_stop="116019" i_length="84"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="116018" e_stop="115939" e_length="80"/>
          </exon>
          <intron i_serial="3" don_prob="0.976" acc_prob="0.990">
            <gDNA_intron_boundary i_start="115938" i_stop="115862" i_length="77"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="115861" e_stop="115737" e_length="125"/>
          </exon>
          <intron i_serial="4" don_prob="0.000" acc_prob="0.595">
            <gDNA_intron_boundary i_start="115736" i_stop="115606" i_length="131"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="115605" e_stop="115484" e_length="122"/>
          </exon>
          <intron i_serial="5" don_prob="0.969" acc_prob="0.679">
            <gDNA_intron_boundary i_start="115483" i_stop="115390" i_length="94"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="115389" e_stop="115152" e_length="238"/>
          </exon>
          <intron i_serial="6" don_prob="0.000" acc_prob="0.887">
            <gDNA_intron_boundary i_start="115151" i_stop="115005" i_length="147"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="115004" e_stop="114904" e_length="101"/>
          </exon>
          <intron i_serial="7" don_prob="0.721" acc_prob="0.906">
            <gDNA_intron_boundary i_start="114903" i_stop="114229" i_length="675"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="114228" e_stop="114179" e_length="50"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="117829" stop="117743"/>
              <exon start="116371" stop="116103"/>
              <exon start="116018" stop="115939"/>
              <exon start="115861" stop="115737"/>
              <exon start="115605" stop="115484"/>
              <exon start="115389" stop="115352"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E332223" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="115552" stop="115484"/>
              <exon start="115389" stop="115152"/>
              <exon start="115004" stop="114904"/>
              <exon start="114228" stop="114179"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E237770" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="20" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTTTTGAACTTCATTTTTTTTTCTTTATCGTCGTATTTATCGATTTATGTTAGAAGAAAAAACTCGGATTGAAAAAAATAATTCCAG : GATATAGATAGAGACAGTTTATTAAAAAAAAAAAAGAAGAAGACATTTTTGAAACTCCCTATTTTAGACGTTACAACTAGCAAATAACATACATTTTTTATCAACAAAATTTTGCAAAAAGAAAAAAGAAAAAAATGGGGTTTATGACATTATTAGAAGTGGCATCAATGCCAATATTGCAAGTGCTAATAGTAAGTGGTTTAGGAGCTGTAATGGCCACTGATTATCTTAAGCTACTTCCTGCTGATGCCCGCAAATACCTTAACAGA : ATAGTTTTTGTGATATTTACACCGGCTTTGATGTTTGCGAGTTTGGCAGAGTCTGTCACCTTTCAAGATATCATCACATG : GTGGTTTATGCCGGTTAATGTTGGATTAACATTTCTATTTGGAGGGATTCTTGGATGGATAGCTATGAAAATATTGAAACCAAAGCCACATCTTGAGGGACTCATTATTGCTACATGCTCATCAG : GAAACTTGGGAAATCTTCTTTTGATTGTCATTCCTGCAATTTGCAAAGAAGATGGAAGTCCATTTGGTGATCATAAAACTTGTGCTTCTGTTGGCCTTTCGTATGCATCTTTCTCAATGGCC : CTTGGAGGTTTCTACATTTGGACATTCACTTATCAGCTAATAAGAAATTCATCCTTGAAATTCAAATCACTAAAAACAGCAGAGGAAAACGAAGCGTTCAAGGGACCAAATGTGGACTCAGAGACAAATGAAAAGTCTTGCCTTCTCGACAACAATTCTCAAGATCAACTTCCTATTAGTACCACAAAAACAACTGAAAATCAAACAGTAGAAGTATCATCGTGGCGAAAAATAGTAG : ATTGTAGGATTCCTGTTTGGTTCAGTTACATGGCTGAAAAACCTGGTGATTGGGGATGCCGCTCCTCTTAGAGTTATTCAAGACTCTGTTAAGTTACTTGG : GGATGGAACCATTCCATGCATCACTCTTATACTTGGAGGCAACCTCACAC</gDNA_template>
            <first_frame> F  L  N  F  I  F  F  S  L  S  S  Y  L  S  I  Y  V  R  R  K  N  S  D  *  K  K  *  F  Q  :  D  I  D  R  D  S  L  L  K  K  K  K  K  K  T  F  L  K  L  P  I  L  D  V  T  T  S  K  *  H  T  F  F  I  N  K  I  L  Q  K  E  K  R  K  K  W  G  L  *  H  Y  *  K  W  H  Q  C  Q  Y  C  K  C  *  *  *  V  V  *  E  L  *  W  P  L  I  I  L  S  Y  F  L  L  M  P  A  N  T  L  T  E :   *  F  L  *  Y  L  H  R  L  *  C  L  R  V  W  Q  S  L  S  P  F  K  I  S  S  H   : G  G  L  C  R  L  M  L  D  *  H  F  Y  L  E  G  F  L  D  G  *  L  *  K  Y  *  N  Q  S  H  I  L  R  D  S  L  L  L  H  A  H  Q  :  E  T  W  E  I  F  F  *  L  S  F  L  Q  F  A  K  K  M  E  V  H  L  V  I  I  K  L  V  L  L  L  A  F  R  M  H  L  S  Q  W  P :   L  E  V  S  T  F  G  H  S  L  I  S  *  *  E  I  H  P  *  N  S  N  H  *  K  Q  Q  R  K  T  K  R  S  R  D  Q  M  W  T  Q  R  Q  M  K  S  L  A  F  S  T  T  I  L  K  I  N  F  L  L  V  P  Q  K  Q  L  K  I  K  Q  *  K  Y  H  R  G  E  K  *  *  :  I  V  G  F  L  F  G  S  V  T  W  L  K  N  L  V  I  G  D  A  A  P  L  R  V  I  Q  D  S  V  K  L  L  G :   D  G  T  I  P  C  I  T  L  I  L  G  G  N  L  T  </first_frame>
            <second_frame>  F  *  T  S  F  F  F  L  Y  R  R  I  Y  R  F  M  L  E  E  K  T  R  I  E  K  N  N  S  R :   I  *  I  E  T  V  Y  *  K  K  K  R  R  R  H  F  *  N  S  L  F  *  T  L  Q  L  A  N  N  I  H  F  L  S  T  K  F  C  K  K  K  K  E  K  N  G  V  Y  D  I  I  R  S  G  I  N  A  N  I  A  S  A  N  S  K  W  F  R  S  C  N  G  H  *  L  S  *  A  T  S  C  *  C  P  Q  I  P  *  Q   : N  S  F  C  D  I  Y  T  G  F  D  V  C  E  F  G  R  V  C  H  L  S  R  Y  H  H  M  :  V  V  Y  A  G  *  C  W  I  N  I  S  I  W  R  D  S  W  M  D  S  Y  E  N  I  E  T  K  A  T  S  *  G  T  H  Y  C  Y  M  L  I  R :   K  L  G  K  S  S  F  D  C  H  S  C  N  L  Q  R  R  W  K  S  I  W  *  S  *  N  L  C  F  C  W  P  F  V  C  I  F  L  N  G   : P  W  R  F  L  H  L  D  I  H  L  S  A  N  K  K  F  I  L  E  I  Q  I  T  K  N  S  R  G  K  R  S  V  Q  G  T  K  C  G  L  R  D  K  *  K  V  L  P  S  R  Q  Q  F  S  R  S  T  S  Y  *  Y  H  K  N  N  *  K  S  N  S  R  S  I  I  V  A  K  N  S  R :   L  *  D  S  C  L  V  Q  L  H  G  *  K  T  W  *  L  G  M  P  L  L  L  E  L  F  K  T  L  L  S  Y  L   : G  M  E  P  F  H  A  S  L  L  Y  L  E  A  T  S  H </second_frame>
            <third_frame>   F  E  L  H  F  F  F  F  I  V  V  F  I  D  L  C  *  K  K  K  L  G  L  K  K  I  I  P   : G  Y  R  *  R  Q  F  I  K  K  K  K  E  E  D  I  F  E  T  P  Y  F  R  R  Y  N  *  Q  I  T  Y  I  F  Y  Q  Q  N  F  A  K  R  K  K  K  K  M  G  F  M  T  L  L  E  V  A  S  M  P  I  L  Q  V  L  I  V  S  G  L  G  A  V  M  A  T  D  Y  L  K  L  L  P  A  D  A  R  K  Y  L  N  R  :  I  V  F  V  I  F  T  P  A  L  M  F  A  S  L  A  E  S  V  T  F  Q  D  I  I  T  W :   W  F  M  P  V  N  V  G  L  T  F  L  F  G  G  I  L  G  W  I  A  M  K  I  L  K  P  K  P  H  L  E  G  L  I  I  A  T  C  S  S   : G  N  L  G  N  L  L  L  I  V  I  P  A  I  C  K  E  D  G  S  P  F  G  D  H  K  T  C  A  S  V  G  L  S  Y  A  S  F  S  M  A  :  L  G  G  F  Y  I  W  T  F  T  Y  Q  L  I  R  N  S  S  L  K  F  K  S  L  K  T  A  E  E  N  E  A  F  K  G  P  N  V  D  S  E  T  N  E  K  S  C  L  L  D  N  N  S  Q  D  Q  L  P  I  S  T  T  K  T  T  E  N  Q  T  V  E  V  S  S  W  R  K  I  V   : D  C  R  I  P  V  W  F  S  Y  M  A  E  K  P  G  D  W  G  C  R  S  S  *  S  Y  S  R  L  C  *  V  T  W  :  G  W  N  H  S  M  H  H  S  Y  T  W  R  Q  P  H   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0291P19.2" strand="-"/>
                <serials PGL_serial="20" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="116291" stop="116103"/>
                    <exon start="116018" stop="115939"/>
                    <exon start="115861" stop="115737"/>
                    <exon start="115605" stop="115484"/>
                    <exon start="115389" stop="115152"/>
                    <exon start="115004" stop="114934"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>822</number_coding_nucleotides>
                  <number_encoded_amino_acids>274</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QITYIFYQQNFAKRKKKKMGFMTLLEVASMPILQVLIVSGLGAVMATDYLKLLPADARKYLNRIVFVIFTPALMFASLAESVTFQDIITWWFMPVNVGLTFLFGGILGWIAMKILKPKPHLEGLIIATCSSGNLGNLLLIVIPAICKEDGSPFGDHKTCASVGLSYASFSMALGGFYIWTFTYQLIRNSSLKFKSLKTAEENEAFKGPNVDSETNEKSCLLDNNSQDQLPISTTKTTENQTVEVSSWRKIVDCRIPVWFSYMAEKPGDWGCRSS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="21" PGL_strand="+" PGL_start="127002" PGL_stop="129423"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="127002" e_stop="127055"/>
            <exon e_start="127175" e_stop="127360"/>
            <exon e_start="127450" e_stop="127577"/>
            <exon e_start="129396" e_stop="129423"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.889" acc_prob="0.000" e_score="0.944"/>
          <exon-intron don_prob="0.993" acc_prob="0.894" e_score="0.909"/>
          <exon-intron don_prob="0.983" acc_prob="0.998" e_score="0.992"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.944">
            <gDNA_exon_boundary e_start="127002" e_stop="127055" e_length="54"/>
          </exon>
          <intron i_serial="1" don_prob="0.889" acc_prob="0.000">
            <gDNA_intron_boundary i_start="127056" i_stop="127174" i_length="119"/>
          </intron>
          <exon e_serial="2" e_score="0.909">
            <gDNA_exon_boundary e_start="127175" e_stop="127360" e_length="186"/>
          </exon>
          <intron i_serial="2" don_prob="0.993" acc_prob="0.894">
            <gDNA_intron_boundary i_start="127361" i_stop="127449" i_length="89"/>
          </intron>
          <exon e_serial="3" e_score="0.992">
            <gDNA_exon_boundary e_start="127450" e_stop="127577" e_length="128"/>
          </exon>
          <intron i_serial="3" don_prob="0.983" acc_prob="0.998">
            <gDNA_intron_boundary i_start="127578" i_stop="129395" i_length="1818"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="129396" e_stop="129423" e_length="28"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="127002" stop="127055"/>
              <exon start="127175" stop="127360"/>
              <exon start="127450" stop="127577"/>
              <exon start="129396" stop="129423"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E366884" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="21" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GATTGGCGCTCCATTCTTCTCTTTGTTGAGGATACTGTCACGAATCTTTGGACT : GAGAGAGATTCGATCTTCAACAGAATATTCTGTTGGAAAGTTCTTCTGAAAAGCACGACACCGTGTCCAGATTCATCTCTCAGACAGAATTTCGAAGTTGGTCAATTCATTGATCTCTTGATCATTGCACAGTTTGTGTAAACTGGAAATCCAGAAACTCAGAGCAACTCCTTTCATCCAATGCAG : AAACTAGAGCTTTAAGGGAACTGTAGCATTCTGCAAAAGCTATCTTCTCAGAGCTTCCACAGCAGTCATACCATCAGTGCGATCAATCTACCGCCCAAAGTTGTGGTGACAATGTATTCTGATGAAAG : TGAAGATGACCTGCTATGCACACGTGCT</gDNA_template>
            <first_frame> D  W  R  S  I  L  L  F  V  E  D  T  V  T  N  L  W  T  :  E  R  D  S  I  F  N  R  I  F  C  W  K  V  L  L  K  S  T  T  P  C  P  D  S  S  L  R  Q  N  F  E  V  G  Q  F  I  D  L  L  I  I  A  Q  F  V  *  T  G  N  P  E  T  Q  S  N  S  F  H  P  M  Q  :  K  L  E  L  *  G  N  C  S  I  L  Q  K  L  S  S  Q  S  F  H  S  S  H  T  I  S  A  I  N  L  P  P  K  V  V  V  T  M  Y  S  D  E  S :   E  D  D  L  L  C  T  R  A </first_frame>
            <second_frame>  I  G  A  P  F  F  S  L  L  R  I  L  S  R  I  F  G  L :   R  E  I  R  S  S  T  E  Y  S  V  G  K  F  F  *  K  A  R  H  R  V  Q  I  H  L  S  D  R  I  S  K  L  V  N  S  L  I  S  *  S  L  H  S  L  C  K  L  E  I  Q  K  L  R  A  T  P  F  I  Q  C  R :   N  *  S  F  K  G  T  V  A  F  C  K  S  Y  L  L  R  A  S  T  A  V  I  P  S  V  R  S  I  Y  R  P  K  L  W  *  Q  C  I  L  M  K   : V  K  M  T  C  Y  A  H  V   </second_frame>
            <third_frame>   L  A  L  H  S  S  L  C  *  G  Y  C  H  E  S  L  D   : *  E  R  F  D  L  Q  Q  N  I  L  L  E  S  S  S  E  K  H  D  T  V  S  R  F  I  S  Q  T  E  F  R  S  W  S  I  H  *  S  L  D  H  C  T  V  C  V  N  W  K  S  R  N  S  E  Q  L  L  S  S  N  A   : E  T  R  A  L  R  E  L  *  H  S  A  K  A  I  F  S  E  L  P  Q  Q  S  Y  H  Q  C  D  Q  S  T  A  Q  S  C  G  D  N  V  F  *  *  K  :  *  R  *  P  A  M  H  T  C  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0291P19.2" strand="+"/>
                <serials PGL_serial="21" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="127002" stop="127055"/>
                    <exon start="127175" stop="127315"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>192</number_coding_nucleotides>
                  <number_encoded_amino_acids>64</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DWRSILLFVEDTVTNLWTERDSIFNRIFCWKVLLKSTTPCPDSSLRQNFEVGQFIDLLIIAQFV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="22" PGL_strand="+" PGL_start="134521" PGL_stop="135240"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="134521" e_stop="135240"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.981"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.981">
            <gDNA_exon_boundary e_start="134521" e_stop="135240" e_length="720"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="134521" stop="135240"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E212648" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="22" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AATTTTGAGGTTTTTTTTAAAGAGGTAGGGGACTTGATCAGCTGATGTTTATGGGTCAGGTCTTTCTGAATTATATTATATGATGGTGATGCTTGGTCACATATACATTCATAGTGAAGAAAATCTTAATAATTATTTAAAACCACAGCTATTCTCTCCTCTAAGTTGGATGGGACTCGCATAAATAAATAAAATAAAAAAATTTCCTTCAATGTAGATAGTCCCTGCGTTGCATTATATTATTCACCGTGTAATAATCCCCACACGTTTATTTACCACATAACAGTTTTTACATTACTATAACTGAATAAGTAATACTTTAATCAAATAATGTCTTACTCTCTGGTATTGCAATTTTGTGATATTACTAAGTAAAGAAGAAAGATATAGTGTGATTATCTTTTGCTTCATCTTTTTGTGACTGTCTGGCGGAGTATATTCTTGTGTAGAAACTGAGGCCTATGTCTAAATAAATGTTGTCCCTTTTTACATAGGCAAGGATTGTTATCTTTTGTTTGATTCTAGCATTTATCTCTGTTGAACATTATCTTTTTTCGAGAACCGCCTACAGTTCCAACTAAAAAGAACTAAAAGTGTGAAATAATTTTTCATTATCTCAGTTGAAGTACTGAGCCTCCCGATATCGGGAGACTCAGTACTTCAACTAGTCTCCATGTTCCTCGAATAGATCTCTTAGTTGTTGAGAAGGTTGCCAACCGC</gDNA_template>
            <first_frame> N  F  E  V  F  F  K  E  V  G  D  L  I  S  *  C  L  W  V  R  S  F  *  I  I  L  Y  D  G  D  A  W  S  H  I  H  S  *  *  R  K  S  *  *  L  F  K  T  T  A  I  L  S  S  K  L  D  G  T  R  I  N  K  *  N  K  K  I  S  F  N  V  D  S  P  C  V  A  L  Y  Y  S  P  C  N  N  P  H  T  F  I  Y  H  I  T  V  F  T  L  L  *  L  N  K  *  Y  F  N  Q  I  M  S  Y  S  L  V  L  Q  F  C  D  I  T  K  *  R  R  K  I  *  C  D  Y  L  L  L  H  L  F  V  T  V  W  R  S  I  F  L  C  R  N  *  G  L  C  L  N  K  C  C  P  F  L  H  R  Q  G  L  L  S  F  V  *  F  *  H  L  S  L  L  N  I  I  F  F  R  E  P  P  T  V  P  T  K  K  N  *  K  C  E  I  I  F  H  Y  L  S  *  S  T  E  P  P  D  I  G  R  L  S  T  S  T  S  L  H  V  P  R  I  D  L  L  V  V  E  K  V  A  N  R </first_frame>
            <second_frame>  I  L  R  F  F  L  K  R  *  G  T  *  S  A  D  V  Y  G  S  G  L  S  E  L  Y  Y  M  M  V  M  L  G  H  I  Y  I  H  S  E  E  N  L  N  N  Y  L  K  P  Q  L  F  S  P  L  S  W  M  G  L  A  *  I  N  K  I  K  K  F  P  S  M  *  I  V  P  A  L  H  Y  I  I  H  R  V  I  I  P  T  R  L  F  T  T  *  Q  F  L  H  Y  Y  N  *  I  S  N  T  L  I  K  *  C  L  T  L  W  Y  C  N  F  V  I  L  L  S  K  E  E  R  Y  S  V  I  I  F  C  F  I  F  L  *  L  S  G  G  V  Y  S  C  V  E  T  E  A  Y  V  *  I  N  V  V  P  F  Y  I  G  K  D  C  Y  L  L  F  D  S  S  I  Y  L  C  *  T  L  S  F  F  E  N  R  L  Q  F  Q  L  K  R  T  K  S  V  K  *  F  F  I  I  S  V  E  V  L  S  L  P  I  S  G  D  S  V  L  Q  L  V  S  M  F  L  E  *  I  S  *  L  L  R  R  L  P  T   </second_frame>
            <third_frame>   F  *  G  F  F  *  R  G  R  G  L  D  Q  L  M  F  M  G  Q  V  F  L  N  Y  I  I  *  W  *  C  L  V  T  Y  T  F  I  V  K  K  I  L  I  I  I  *  N  H  S  Y  S  L  L  *  V  G  W  D  S  H  K  *  I  K  *  K  N  F  L  Q  C  R  *  S  L  R  C  I  I  L  F  T  V  *  *  S  P  H  V  Y  L  P  H  N  S  F  Y  I  T  I  T  E  *  V  I  L  *  S  N  N  V  L  L  S  G  I  A  I  L  *  Y  Y  *  V  K  K  K  D  I  V  *  L  S  F  A  S  S  F  C  D  C  L  A  E  Y  I  L  V  *  K  L  R  P  M  S  K  *  M  L  S  L  F  T  *  A  R  I  V  I  F  C  L  I  L  A  F  I  S  V  E  H  Y  L  F  S  R  T  A  Y  S  S  N  *  K  E  L  K  V  *  N  N  F  S  L  S  Q  L  K  Y  *  A  S  R  Y  R  E  T  Q  Y  F  N  *  S  P  C  S  S  N  R  S  L  S  C  *  E  G  C  Q  P  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0291P19.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 221 chains have been computed
$ 
$ memory statistics:
$ 271520 bytes spliced alignments in total
$ 130 spliced alignments have been stored
$ 2088 bytes was the average size of a spliced alignment
$ 34328 bytes predicted gene locations in total
$ 22 predicted gene locations have been stored
$ 1560 bytes was the average size of a predicted gene location
$ 1 megabytes was the average size of the backtrace matrix
$ 266 backtrace matrices have been allocated
$ 
$ date finished: 2009-12-01 10:27:19
-->
