<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-12-01 10:26:44"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E367403" ref_strand="+" ref_description="SGN-E367403 [cLPT-7-F1]">
      <seq>aaaagtgaaaggtattataaagcaaattccaacagcaaagattctccataaacactttcctaatgctacagttttccttaactatacaaaatcttggtagagaaaatcttgaagcaaatctcacatggccatttcaaatttgtccatttttattattttccttgtacttcaatttctatgcataacagaagctcaatcaagcatttgtagaaattcgtgtggcgatatcccaattcagtatccttttggcattgatgatggctgtggaagtccattttatcgacacattcttgtatgcactggtggacagcttcaacttagaaccccttctggtagatatcctgttagaaatttaagttatatggatccacatattcttgtgaccgatcccttaatgtggaattgtctagatggtgacaattgtcgacctaccaggcgcgttagtctagatactagcacacatttcactttgtcctctgaaaatgactacttgttctttaatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="+" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="5754" stop="6855"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="6054" g_stop="6555" g_length="502"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="503" r_length="503" r_score="0.968"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="+" ref_id="SGN-E367403" ref_strand="+">
        <total_alignment_score>0.968</total_alignment_score>
        <cumulative_length_of_scored_exons>502</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E367403" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="6054" e_stop="6555"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAGTGAAAGGTA-TATAAAGCAAAAACCAACAGCAAAGATTCTCCATAAACACTTTCCCAATGCTACAGTTTTCCTTAACTATACAAAATCTTGGTAGAGAAAATCTTCAAGCAAATCTCACATGGCCATTTCAAATTTGTCCATCTTTATTATTTTCCTTGTACTTCAATTTCTATGCATAACAGAAGCTCAATCAAGCATTTGTAGAAATTCTTGTGGCGATATCCCAATTCAGTATCCTTTTGGCATTGATGATGGCTGTGGAAGTCCATTTTATCGACACATTCTTGTATGCACTGGTGGTCAGCTTCAACTCAGAACCCCTTCTGGTAGATATCCTGTTAGAAATTTGAGTTATATGGATCCACATATTCTTGTGACCGATCCCTTAATGTGGAATTGTCTAGATGGTGACAATTTTCGACCTACCAGGCCGTTTAGCCTAGATACTAGCACACATTTCACTTTGTCCTCTGAAAATGACTACTTGTTCTTTAATT</genome_strand>
        <mrna_strand>AAAAGTGAAAGGTATTATAAAGCAAATTCCAACAGCAAAGATTCTCCATAAACACTTTCCTAATGCTACAGTTTTCCTTAACTATACAAAATCTTGGTAGAGAAAATCTTGAAGCAAATCTCACATGGCCATTTCAAATTTGTCCATTTTTATTATTTTCCTTGTACTTCAATTTCTATGCATAACAGAAGCTCAATCAAGCATTTGTAGAAATTCGTGTGGCGATATCCCAATTCAGTATCCTTTTGGCATTGATGATGGCTGTGGAAGTCCATTTTATCGACACATTCTTGTATGCACTGGTGGACAGCTTCAACTTAGAACCCCTTCTGGTAGATATCCTGTTAGAAATTTAAGTTATATGGATCCACATATTCTTGTGACCGATCCCTTAATGTGGAATTGTCTAGATGGTGACAATTGTCGACCTACCAGGCGCGTTAGTCTAGATACTAGCACACATTTCACTTTGTCCTCTGAAAATGACTACTTGTTCTTTAATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E239391" ref_strand="+" ref_description="SGN-E239391 [cLEL-9-O12](-)">
      <seq>ctgaatctttcaagctaactatgtattcgcgaagtataaattagacatgtcaagacattaaaaaatcctgtgaagataacagggcatgctgatgataggaaaaggaaagaaggaaattttgtatcagcatttagcaaggttcattgacaacacattgaagaggaccagcattggaagttaaagagggagtaaatgctccgtgagcaacaatgaacgattgtcctctcgtgtattttggagcaatacttccatatccagatggaagaaaataagctccattcataaacatatcattggaggatctccatttccaactcttccatcctttttcttcagtctccctcttggtaacctgtaacataacgatggcgatgacattagtataagttgtttttttttgtgatttccaatttgagaacaggtagtttgatgttagtatacctctttgttgtaagctttgtcaggagcaatgaaataatttccttcaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="+" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="7569" stop="8656"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7869" g_stop="8346" g_length="478"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="477" r_length="477" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="487" polyA_stop="503"/>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="+" ref_id="SGN-E239391" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>478</cumulative_length_of_scored_exons>
        <coverage percentage="0.950" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E239391" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7869" e_stop="8346"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGAATCTTTCAAGCTAACTATGTATTCGCGAAGTATAAATTAGACATGTCAAGACATTAAAAAATCCTGTCGAAGATAACAGGGCATGCTGATGATAGGAAAAGGAAAGAAGGAAATTTTGTATCAGCATTTAGCAAGGTTCATTGACAACACATTGAAGAGGACCAGCATTGGAAGTTAAAGAGGGAGTAAATGCTCCGTGAGCAACAATGAACGATTGTCCTCTCGTGTATTTTGGAGCAATACTTCCATATCCAGATGGAAGAAAATAAGCTCCATTCATAAACATATCATTGGAGGATCTCCATTTCCAACTCTTCCATCCTTTTTCTTCAGTCTCCCTCTTGGTAACCTGTAACATAACGATGGCGATGACATTAGTATAAGTTGTTTTTTTTTGTGATTTCCAATTTGAGAACAGGTAGTTTGATGTTAGTATACCTCTTTGTTGTAAGCTTTGTCAGGAGCAATGAAATA</genome_strand>
        <mrna_strand>CTGAATCTTTCAAGCTAACTATGTATTCGCGAAGTATAAATTAGACATGTCAAGACATTAAAAAATCCTGT-GAAGATAACAGGGCATGCTGATGATAGGAAAAGGAAAGAAGGAAATTTTGTATCAGCATTTAGCAAGGTTCATTGACAACACATTGAAGAGGACCAGCATTGGAAGTTAAAGAGGGAGTAAATGCTCCGTGAGCAACAATGAACGATTGTCCTCTCGTGTATTTTGGAGCAATACTTCCATATCCAGATGGAAGAAAATAAGCTCCATTCATAAACATATCATTGGAGGATCTCCATTTCCAACTCTTCCATCCTTTTTCTTCAGTCTCCCTCTTGGTAACCTGTAACATAACGATGGCGATGACATTAGTATAAGTTGTTTTTTTTTGTGATTTCCAATTTGAGAACAGGTAGTTTGATGTTAGTATACCTCTTTGTTGTAAGCTTTGTCAGGAGCAATGAAATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E238906" ref_strand="+" ref_description="SGN-E238906 [cLEL-9-O12](-)">
      <seq>tctttcaagctaactatgattcgcgaagtataaattagacatgtcaagacattaaaaaatcctgtcgaagataacagggcatgctgatgataggaaaaggaaagaaggaaattttgtatcagcatttagcaaggttcattgacaacacattgaagaggaccagcattggaagttaaagagggagtaaatgctccgtgagcaacaatgaacgattgtcctctcgtgtattttggagcaatacttccatatccagatggaagaaaataagctccattcataaacatatcattggaggatctccatttccaactcttccatcctttttcttcagtctccctcttggtaacctgtaacataacgatggcgatgacattagtataagttgtttttttttgtgatttccaatttgagaacaggtagtttgatgttagtatacctctttgttgtaagctttgtcaggagcaatgaaataatttccttcaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="+" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="7574" stop="8656"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7874" g_stop="8346" g_length="473"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="472" r_length="472" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="482" polyA_stop="498"/>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="+" ref_id="SGN-E238906" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>473</cumulative_length_of_scored_exons>
        <coverage percentage="0.950" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E238906" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7874" e_stop="8346"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTTTCAAGCTAACTATGTATTCGCGAAGTATAAATTAGACATGTCAAGACATTAAAAAATCCTGTCGAAGATAACAGGGCATGCTGATGATAGGAAAAGGAAAGAAGGAAATTTTGTATCAGCATTTAGCAAGGTTCATTGACAACACATTGAAGAGGACCAGCATTGGAAGTTAAAGAGGGAGTAAATGCTCCGTGAGCAACAATGAACGATTGTCCTCTCGTGTATTTTGGAGCAATACTTCCATATCCAGATGGAAGAAAATAAGCTCCATTCATAAACATATCATTGGAGGATCTCCATTTCCAACTCTTCCATCCTTTTTCTTCAGTCTCCCTCTTGGTAACCTGTAACATAACGATGGCGATGACATTAGTATAAGTTGTTTTTTTTTGTGATTTCCAATTTGAGAACAGGTAGTTTGATGTTAGTATACCTCTTTGTTGTAAGCTTTGTCAGGAGCAATGAAATA</genome_strand>
        <mrna_strand>TCTTTCAAGCTAACTATG-ATTCGCGAAGTATAAATTAGACATGTCAAGACATTAAAAAATCCTGTCGAAGATAACAGGGCATGCTGATGATAGGAAAAGGAAAGAAGGAAATTTTGTATCAGCATTTAGCAAGGTTCATTGACAACACATTGAAGAGGACCAGCATTGGAAGTTAAAGAGGGAGTAAATGCTCCGTGAGCAACAATGAACGATTGTCCTCTCGTGTATTTTGGAGCAATACTTCCATATCCAGATGGAAGAAAATAAGCTCCATTCATAAACATATCATTGGAGGATCTCCATTTCCAACTCTTCCATCCTTTTTCTTCAGTCTCCCTCTTGGTAACCTGTAACATAACGATGGCGATGACATTAGTATAAGTTGTTTTTTTTTGTGATTTCCAATTTGAGAACAGGTAGTTTGATGTTAGTATACCTCTTTGTTGTAAGCTTTGTCAGGAGCAATGAAATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E436359" ref_strand="-" ref_description="SGN-E436359 [STM-62-L4]">
      <seq>cgttacgaaaaatggttgatgtatgctattggtggaagtgctaatccaaccatctttagtgaaggaaattatttcttggcatctaaatccacacaagttacaaaaagggaatctaagaatggatggcagaattggaagtggaggtcttcaaaggataaattcttgaatggtgcctattttataccatctggttatgggactactaatccatattattcaaaggctcaatcatttcctgtggctgatggatctatggttccttctttaactgctgatgctggacctttgcattgtacttcttataaatgttaacctttttttttggcctggaattatttaagtgcataattgtttgttttatttatgcactaattttattttatttacttctaccaaatagggagtcttaaaaattagaatccctgagaatgagatgacaactgtattgaggatccattttggatattgtattgttcattaaaaaaaaaaactttcatgtaaatatatgagtaggtttatataaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="-" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="12257" stop="11034"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11957" g_stop="11862" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="96" r_length="96" r_score="0.979"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11861" i_stop="11765" i_length="97">
            <donor d_prob="0.875" d_score="0.96"/>
            <acceptor a_prob="0.964" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11764" g_stop="11352" g_length="413"/>
          <reference_exon_boundary r_type="cDNA" r_start="97" r_stop="503" r_length="407" r_score="0.944"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="522" polyA_stop="537"/>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="-" ref_id="SGN-E436359" ref_strand="-">
        <total_alignment_score>0.951</total_alignment_score>
        <cumulative_length_of_scored_exons>509</cumulative_length_of_scored_exons>
        <coverage percentage="0.948" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E436359" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="11957" e_stop="11862"/>
          <exon e_start="11764" e_stop="11352"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGTTACGAAAAATGGTTGATGTATGCTATTGGTGGAAGTGCTAATCCAACCATATTTAGTGAAGGAAATTATTTTTTGGCATCTAAATCCACACAAGTGAGTCTTCAAGTCTGTGACATTCTTTCCTTTTTAGTTTATTCAGAACGAACGAATATGTATATCAATCAATATTAACAAAATAACTTATTGATAGGTTACAAAAAGGGAATCTAAGAATGGATGGCAAAATTGGAAGTGGAGGTCTTCAAAGGATAAATTTTTGAATGGAGCCTATTTTATACCATCTGGTTATGGTACTACTAATCCATATTACTCAAAGGCTCAATCATTTCCTGTGGCTGATGGATCTATGGTTCCTTCTTTAACTGCTGATGCTGGACCTTTGCGTTGTACTTCTTACAAATGTTAACCCCCTTCTTTTTTGGGCCTGGAATTATTTTAAGTGCATAATTGTTTGTTTTGTTTATGCACTAATTTTTATTTTATTTACTTCTACCAAATGGGGAGTCTTAAAAAACTAGAATCCCTGAGAATGAGATGACTACTGTATTGAGGATCCATTTTGGATATTGTGTTGTTCATT-AAAAGAAAAACTTTCATGTAAAT</genome_strand>
        <mrna_strand>CGTTACGAAAAATGGTTGATGTATGCTATTGGTGGAAGTGCTAATCCAACCATCTTTAGTGAAGGAAATTATTTCTTGGCATCTAAATCCACACAA.................................................................................................GTTACAAAAAGGGAATCTAAGAATGGATGGCAGAATTGGAAGTGGAGGTCTTCAAAGGATAAATTCTTGAATGGTGCCTATTTTATACCATCTGGTTATGGGACTACTAATCCATATTATTCAAAGGCTCAATCATTTCCTGTGGCTGATGGATCTATGGTTCCTTCTTTAACTGCTGATGCTGGACCTTTGCATTGTACTTCTTATAAATGTTAA---CCTT-TTTTTTTGGCCTGGAATTA-TTTAAGTGCATAATTGTTTGTTTTATTTATGCACTAA-TTTTATTTTATTTACTTCTACCAAATAGGGAGTCTT-AAAAATTAGAATCCCTGAGAATGAGATGACAACTGTATTGAGGATCCATTTTGGATATTGTATTGTTCATTAAAAAAAAAAACTTTCATGTAAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E436358" ref_strand="+" ref_description="SGN-E436358 [STM-62-L4]">
      <seq>cttactcttctttttttgggtatctcaactttacaagccgagtactatgcaccaagtaaaaactatgcaccttctactactagaaaaactatgaacgtgatcgattcatgttggcgtgccaagtcaaactgggccaagaatcgctatgcattagccgattgtgctgtcggctacggcaaagcagctatcggtgggaaaaacggtgcgatatacgtcgttactaatccgtccgacgacccggttaaccctaaaccgggtacactaagatatggtgcaatccaatctaaaccactatggattattttcaacaaggatatggttataacgttaaagaatgaacttatgatcaatagttacaagactattgatggaaggggtgcagaagttgaaattgcatatggaccttgtataacaattcaacatgttagtcatgtgattatacatgggataagtatacatgattgtaagccggggaaaaaagatatcgtccgggatagtccggtgcatgcaggccatcgtaacggcgccgacggagacggcattgatatatttcaatcgactcatgtttggatcgaccattgttatcttgcacgttgtaccgatggacttattgacgttattcatgcttctactggtgttaccatttcaaataactacttcactcagcatgataaagttatgttatttgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="-" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="13509" stop="12219"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="13209" g_stop="12532" g_length="678"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="675" r_length="675" r_score="0.956"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="-" ref_id="SGN-E436358" ref_strand="+">
        <total_alignment_score>0.956</total_alignment_score>
        <cumulative_length_of_scored_exons>678</cumulative_length_of_scored_exons>
        <coverage percentage="0.984" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E436358" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="13209" e_stop="12532"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTGCTCTTCTTTTCTTGTGTATCTCAACGTTACAAGCCGAGTACTATGCACCTAGTAAAAACTATTATGCACCTTCTACTACTAAAAAAACCATGAACGTGATCGATTCATGTTGGCGTGCCAAGTCAAACTGGGCCAAAAATCGCTATGCATTAGCCGATTGTGCTGTCGGCTATGGCAAAGCAGCTATCGGAGGGAAAAACGGTGCGATATACGTCGTTACTAACCCGTCCGATGACCCGGTCAACCCTAAACCGGGTACACTAAGATATGGTGTAATCCAATCTAAACCACTGTGGATTATTTTCAACAAGGATATGGTTATAACGTTAAAGAATGAGCTTATGATCAATAGTTACAAAACTATTGATGGAAGGGGTGCAAAAGTTGAAATTGCATATGGACCTTGTATAACAATTCAACGTGTTAGTCATGTGATTATACATGGGATCAGTATACATGATTGTAAGCCGGGGAAAAGAGGTATAGTCCGGGATAGTCCGGTGCATGCCGGCCATCGTAACGGCGCTGACGGAGACGGCATTGATATATTTCAATCCACTCATGTTTGGATAGACCATTGTTATCTTGCACGTTGTACCGATGGACTTATTGACGTTATTCATGCTTCTACTGGTGTTACCATTTCAAATAACTACTTCACTCAGCATGATAAA</genome_strand>
        <mrna_strand>CTTACTCTTCTTTTTTTGGGTATCTCAACTTTACAAGCCGAGTACTATGCACCAAGTAAAAAC---TATGCACCTTCTACTACTAGAAAAACTATGAACGTGATCGATTCATGTTGGCGTGCCAAGTCAAACTGGGCCAAGAATCGCTATGCATTAGCCGATTGTGCTGTCGGCTACGGCAAAGCAGCTATCGGTGGGAAAAACGGTGCGATATACGTCGTTACTAATCCGTCCGACGACCCGGTTAACCCTAAACCGGGTACACTAAGATATGGTGCAATCCAATCTAAACCACTATGGATTATTTTCAACAAGGATATGGTTATAACGTTAAAGAATGAACTTATGATCAATAGTTACAAGACTATTGATGGAAGGGGTGCAGAAGTTGAAATTGCATATGGACCTTGTATAACAATTCAACATGTTAGTCATGTGATTATACATGGGATAAGTATACATGATTGTAAGCCGGGGAAAAAAGATATCGTCCGGGATAGTCCGGTGCATGCAGGCCATCGTAACGGCGCCGACGGAGACGGCATTGATATATTTCAATCGACTCATGTTTGGATCGACCATTGTTATCTTGCACGTTGTACCGATGGACTTATTGACGTTATTCATGCTTCTACTGGTGTTACCATTTCAAATAACTACTTCACTCAGCATGATAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E460729" ref_strand="+" ref_description="SGN-E460729 [cPRO-32-O1]">
      <seq>cttactcttctttttttgggtatctcaactttacaagccgagtactatgcaccaagtaaaaactatgcaccttctactactagaaaaactatgaacgtgatcgattcatgttggcgtgccaagtcaaactgggccaagaatcgctatgcattagccgattgtgctgtcggctacggcaaagcagctatcggtgggaaaaacggtgcgatatacgtcgttactaatccgtccgacgacccggttaaccctaaaccgggtacactaagatatggtgcaatccaatctaaaccactatggattattttcaacaaggatatggttataacgttaaagaatgaacttatgatcaatagttacaagactattgatggaaggggtgcagaagttgaaattgcatatggaccttgtataacaattcaacatgttagtcatgtgattatacatgggataagtatacatgattgtaagccggggaaaaaagatatcgtccgggatagtccggtgcatgcaggccatcgtaacggcgccgacggagacggcattgatatatttcaatcgactcatgtttggatcgaccattgttatcttgcacgttgtaccgatggactttatgacgttattcatgcttctac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="-" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="13509" stop="12275"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="13209" g_stop="12575" g_length="635"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="632" r_length="632" r_score="0.950"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="-" ref_id="SGN-E460729" ref_strand="+">
        <total_alignment_score>0.950</total_alignment_score>
        <cumulative_length_of_scored_exons>635</cumulative_length_of_scored_exons>
        <coverage percentage="1.005" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E460729" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="13209" e_stop="12575"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTGCTCTTCTTTTCTTGTGTATCTCAACGTTACAAGCCGAGTACTATGCACCTAGTAAAAACTATTATGCACCTTCTACTACTAAAAAAACCATGAACGTGATCGATTCATGTTGGCGTGCCAAGTCAAACTGGGCCAAAAATCGCTATGCATTAGCCGATTGTGCTGTCGGCTATGGCAAAGCAGCTATCGGAGGGAAAAACGGTGCGATATACGTCGTTACTAACCCGTCCGATGACCCGGTCAACCCTAAACCGGGTACACTAAGATATGGTGTAATCCAATCTAAACCACTGTGGATTATTTTCAACAAGGATATGGTTATAACGTTAAAGAATGAGCTTATGATCAATAGTTACAAAACTATTGATGGAAGGGGTGCAAAAGTTGAAATTGCATATGGACCTTGTATAACAATTCAACGTGTTAGTCATGTGATTATACATGGGATCAGTATACATGATTGTAAGCCGGGGAAAAGAGGTATAGTCCGGGATAGTCCGGTGCATGCCGGCCATCGTAACGGCGCTGACGGAGACGGCATTGATATATTTCAATCCACTCATGTTTGGATAGACCATTGTTATCTTGCACGTTGTACCGATGGACTTATTGACGTTATTCATGCTTCTAC</genome_strand>
        <mrna_strand>CTTACTCTTCTTTTTTTGGGTATCTCAACTTTACAAGCCGAGTACTATGCACCAAGTAAAAAC---TATGCACCTTCTACTACTAGAAAAACTATGAACGTGATCGATTCATGTTGGCGTGCCAAGTCAAACTGGGCCAAGAATCGCTATGCATTAGCCGATTGTGCTGTCGGCTACGGCAAAGCAGCTATCGGTGGGAAAAACGGTGCGATATACGTCGTTACTAATCCGTCCGACGACCCGGTTAACCCTAAACCGGGTACACTAAGATATGGTGCAATCCAATCTAAACCACTATGGATTATTTTCAACAAGGATATGGTTATAACGTTAAAGAATGAACTTATGATCAATAGTTACAAGACTATTGATGGAAGGGGTGCAGAAGTTGAAATTGCATATGGACCTTGTATAACAATTCAACATGTTAGTCATGTGATTATACATGGGATAAGTATACATGATTGTAAGCCGGGGAAAAAAGATATCGTCCGGGATAGTCCGGTGCATGCAGGCCATCGTAACGGCGCCGACGGAGACGGCATTGATATATTTCAATCGACTCATGTTTGGATCGACCATTGTTATCTTGCACGTTGTACCGATGGACTTTATGACGTTATTCATGCTTCTAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E709501" ref_strand="+" ref_description="SGN-E709501 [FA52AH12]">
      <seq>cgcgtaggaaacaacaaaaggcgagaaaaaagattcattaagtgcagtgctggagacggaaccgtcagattcaggaatggctgctgcttccgctacggatggtgtcgctgcgacggcagtacggtcggtaattcagcggattgaacacgtggctgaacgatgtggccgcagatcggaccaagtaaggctggtggctgtaagcaaaactaagccagtatctctcctcaaacaagtttacgacgccggtcatcgttgtttcggtgaaaattacgtcaaagagctcattgagaaagctcctcagcttccagatgatatagagtggcatttcatagggaatttgcagagcaataaagtcaagccacttttaactggagtgccaaatcttgctatggtggagacagtagatgatgaaaagattgcaaatcagcttgaccgtgtggctgcgaacattggaagaaagccattgaaagtttttatccaagttaatacaagcggggaagaaactaaatctggtgttgaaccagatgggtgtctggaactcgtgaaacatgttacttcaaactgccctaatcttgaattctgtggcttgatgactattggaatgccagattatacatcgactcctgaaaactttaagactttagcaaaatgtagaagtgaagtttgcgaggcacttggaatatctgaagatncatgtgagctgtncatgggcatgtcaggcgactttgaacttgctgttgagatgggcagtacaaatgttcgagttggatctactatatttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="+" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="25074" stop="29666"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="25371" g_stop="25671" g_length="301"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="301" r_length="301" r_score="0.987"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="25672" i_stop="26593" i_length="922">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="26594" g_stop="26660" g_length="67"/>
          <reference_exon_boundary r_type="cDNA" r_start="302" r_stop="368" r_length="67" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="26661" i_stop="27137" i_length="477">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="27138" g_stop="27184" g_length="47"/>
          <reference_exon_boundary r_type="cDNA" r_start="369" r_stop="415" r_length="47" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="27185" i_stop="27822" i_length="638">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="27823" g_stop="27910" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="416" r_stop="503" r_length="88" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="27911" i_stop="28022" i_length="112">
            <donor d_prob="0.190" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="28023" g_stop="28156" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="504" r_stop="637" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="28157" i_stop="28250" i_length="94">
            <donor d_prob="0.716" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="28251" g_stop="28349" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="638" r_stop="736" r_length="99" r_score="0.960"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="28350" i_stop="29320" i_length="971">
            <donor d_prob="0.587" d_score="0.92"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="29321" g_stop="29366" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="737" r_stop="782" r_length="46" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="+" ref_id="SGN-E709501" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>782</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E709501" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="25371" e_stop="25671"/>
          <exon e_start="26594" e_stop="26660"/>
          <exon e_start="27138" e_stop="27184"/>
          <exon e_start="27823" e_stop="27910"/>
          <exon e_start="28023" e_stop="28156"/>
          <exon e_start="28251" e_stop="28349"/>
          <exon e_start="29321" e_stop="29366"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGACGAGGAAACAACAAAAGGCGAGAAAAAAGATTCATTAAGTGCAGTGCTGGAGACGGAACCGTCAGATTCAGGAATGGCTGCTGCTTCCGCTACGGATGGTGTCGCTGCGACGGCAGTACGGTCGGTAATTCAGCGGATTGAACACGTGGCTGAACGATGTGGCCGCAGATCGGACCAAGTAAGGCTGGTGGCTGTAAGCAAAACTAAGCCAGTATCTCTCCTCAAACAAGTTTACGACGCCGGTCATCGTTGTTTCGGTGAAAATTACGTCAAAGAGCTCATTGAGAAAGCTCCTCAGGTAAAGGTTCTATACTCGTGTGTGATGGCCACTACATAATCTAAGCATAGAAAACATATGATTGATTGGTTTGCTGATCGAATTTTTTTGTTTTATTTGACTTTAGGAGTCATTTTATTAAGGTTAAGTTTTATCCAATACAAATACTGTAGGCAAATTTTTGGGCTTATGTAATCTAATCCTGTCTTGTAGTTTAATTTCAATTAACTGGTATTTAGTATAGGAATGTTCTGCTTCAATTGTGTGTTGTTTTTAGCTTAGTATGGATTAATATTAAGACAAATTAGATCTTTTAAACAAATGCCCTTCAGGTATTTTTATGTTTTTGTTATTTGGGATACACTATATTTATAGGAAAATGAAGTTTTTCACCTGTAGCTGAATTGATTTTCTTTCTGAATATTGCCAAGAGGAGATAGTTTGCTTTTAGAATTATTGTTATAGCCCAACCTGCTTATGCACAGTATTGCCCGCTTTGTCCAATAGACCTTGCTGATTAATCCCTCGAGTAAGTCGAAAGATGCCTCAAGTGTGCTACCAAGTTACCTTATTATTTGTCATATACAGTTCAGGACTTTCCTGTCCCTTCCATGGTGTGAATCACCTAATATGTCTTCTACTTCAGAAGTTCACTAGCTTCAGAGTCTGCCAGTTCTTAACCTTTCACAGACATCATAATCACATTCAATTGGTGTTTTGCACTTGTTCATTCTTCTAAGATTTAGCCATGTCATGTATCAATTTTTTGATTATTTTCTTTGTTTTGGGCTAGTTAGTGCTTTTTTTTTTGTGTGTGAGAGAGTATTTTCTTCATGGTAAGTTTTATTTTTTATGTGGGCTGTTGAAAATTTCTGTGGGGAACAATGTGAAGTATTGTGTTTCAGATGAGGTGTTTATACTGCTATCCTTTGGTGAATTGCAGCTTCCAGATGATATAGAGTGGCATTTCATAGGGAATTTGCAGAGCAATAAAGTCAAGCCACTTTTAAGTATGTTCTCCTTCCTTCCTTCACTGTTCCTTCTCCCATCCTTTTCCTTATGGACCAATAAGGAGAAATGTACCTTTCTATGAAAATAGTTTCAGGATGAAGCGAAATCGTAAAAATCGTGATTACATGATAATTTTGTTGGAGAAACAAGGGGAGAAGACTTTTTTTTGGCGTCCTGGTGAAGTCCGTGGAGGGAAGGGTTGTTTCAAGAGTTGTAAACTTTATCTTGGTGAAAGAAACATACTTGCTTCATCAAATTTTGATTATATTAGGTACTGCAAATATTTTAAAAAATGCTAGATATGGTGAAACAGCTCGCCTTCACTTACATCAGTCAGATGATGGACAAAAAGATTCTATCTCCTCTCTGAGTTGGCATGCATGACATAACTTGAATGACGAATTTGAGCCACATTTTTGTGCAACGGGTATAAATGTATAGAGCTTATAATAAATTCTCGTCATCTTTGTTTTCAGCTGGAGTGCCAAATCTTGCTATGGTGGAGACAGTAGATGATGAAAAGGTAACTAACACAGACTCTGCTACTAATTTGTCTCCTAGTCCAGTAAATATCTTTAGAACATATTCTGGTTGTTGACTTGTTAATACAAACATCTTTTAACAATACAAAAAACATATGCCTAATAATGATTTCACTCTTAACTTTTGTTTCAATTCAAAAATCATTGTATTTATCTCGAATTTCTTGATCGGTTTTGGTCGAAGTATCCAAAATCGTTTGACCACATCTGGTACAAATCCCACACCTACATCCACGACGTGTCAACACAGGTGCGGCACCGAAAGTGAAGAGTCTGTGCAAGAAGGAAATAAAGCCGGTTTTAGTAAGAAAAAAAAAAGGGTTATTAAGTGAATTTAATAAGAAGCCTTTTTATTTTAATGCACATATTTAATTTATTCGGAGCTATTGGAGAGGGATAGACATTTGGGGAATATGAGTTGAAGCACTAACAAGAATATTTATACTATAATATTCAATATTGTGAGTAGTGTTTATTTTATTTTTGAGAATGGTTACCGTATATTTATTAGCATTAAGGAAATTTTGGCCACCATATTTACAGTTCAAAGAATTAGCAAAATCCTGTCCATCTTGCAAAGATTCTTATATTTTGTTTAATACTTTAATATATTTTGTAGATTGCAAATCAGCTTGACCGTGTGGCTGCGAACATTGGAAGAAAGCCATTGAAAGTTTTTATCCAAGTTAATACAAGCGGGGAAGAAAGTGGGTATCTGGAGTATGTCTCTGATTTATTAAGAGTCATTTGATCTATTTTTGTGAACACTACTATATTCATGAAGGAAAAGCTAATCATGATTTGATTCCATAATTGCAGCTAAATCTGGTGTTGAACCAGATGGGTGTCTGGAACTCGTGAAACATGTTACTTCAAACTGCCCTAATCTTGAATTCTGTGGCTTGATGACTATTGGAATGCCAGATTATACATCGACTCCTGAAAACTTTAAGGTTGAGGTTTTATCTTTGTTGTTTCTTCTTGGCCTGGTTGCTATTGTTATATCCTCAACTCAAATATGTTGCTATTTGTCATGCTTGGTTTCAGACTTTAGCAAAATGTAGAAGTGAAGTTTGCGAGGCACTTGGAATATCTGAAGATCAATGTGAGCTGTCAATGGGCATGTCAGGCGACTTTGAACTTGCTGTGAGTGACCTGACTTGTCACTAAGCACATCAAATCATTAGTAAGCTTGGAAGGAACTTGTATAACATGAGTTCTCTGGGGAGCATGTGGTAGTCTGAGTGCACCAATTATACAATCACTCTTTATAAATTAAACCAAAGTATTAACTAGACATCTGACTCAGTTTTCATTACTGGTCTCTGTTGTTAGAATCTTCTTGAGTCTGATGTATAATGCTTTATCGCTGGACAATAAACTCGCCCAGCTCCCCGCCACACCCATGGGATTAAGACGCTCAGACTAGGATTGTAGTTTCACCCCTTAACAGCTTGTTACAATTCAAGGGTTAGTCTGTTTTTATCTTTTGATAAGGTAAAAGTCATGTGACCCGGTTTGAACATTGGAACCAACTAGTGATGCTTATGTTAGTTAGGGTAAGCTGCCCGCCTATATCATACTTCTTGGGGGTGTGGATCTTCCTGGACCCTGTGTGAATGCCGGCTGCCCTTCATATTTGCGCTATTCTCTATCAGTTTCCCATGTGTACTTGTTTTCTGTGGCTGATATTATATATCTGTAGGGTGGATTGTTGTTAAAAGTAGAATTTCGTTTGACGCTCTCAAAAAAGAAAAGAAAAATTTAGTATCACAAGTAGAATTTTATTTGATTAGTTGTTGATTCTTTTGGGAGATCTTATCAGTGATGCGCTGTTCCAACCTCCATCCTACCTCCAATCTGATGACTAGTACTGCAGTCACCCATCAACCTATGCTTGTAGCCTATGGCCCCCTTAATTATGTAAGATATTTTCTTTTAAGGAGTAGTCTAGGCTATTGTATCAGGTAAGCATATTTTATCCTTGTGTCCTGCTATATTCAATAAAAGAAACAAGCACACATTCGTGCTTGCTAGCCAGCATTGGTATTGAATTCTACATATGCTTCGTTTGACCTCATGTTCTGCTATACTTATAATGCTGTCTATTACTACAGGTTGAGATGGGCAGTACAAATGTTCGAGTTGGATCTACTATATTTG</genome_strand>
        <mrna_strand>CGCGTAGGAAACAACAAAAGGCGAGAAAAAAGATTCATTAAGTGCAGTGCTGGAGACGGAACCGTCAGATTCAGGAATGGCTGCTGCTTCCGCTACGGATGGTGTCGCTGCGACGGCAGTACGGTCGGTAATTCAGCGGATTGAACACGTGGCTGAACGATGTGGCCGCAGATCGGACCAAGTAAGGCTGGTGGCTGTAAGCAAAACTAAGCCAGTATCTCTCCTCAAACAAGTTTACGACGCCGGTCATCGTTGTTTCGGTGAAAATTACGTCAAAGAGCTCATTGAGAAAGCTCCTCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCCAGATGATATAGAGTGGCATTTCATAGGGAATTTGCAGAGCAATAAAGTCAAGCCACTTTTAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGAGTGCCAAATCTTGCTATGGTGGAGACAGTAGATGATGAAAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCAAATCAGCTTGACCGTGTGGCTGCGAACATTGGAAGAAAGCCATTGAAAGTTTTTATCCAAGTTAATACAAGCGGGGAAGAAA................................................................................................................CTAAATCTGGTGTTGAACCAGATGGGTGTCTGGAACTCGTGAAACATGTTACTTCAAACTGCCCTAATCTTGAATTCTGTGGCTTGATGACTATTGGAATGCCAGATTATACATCGACTCCTGAAAACTTTAAG..............................................................................................ACTTTAGCAAAATGTAGAAGTGAAGTTTGCGAGGCACTTGGAATATCTGAAGATNCATGTGAGCTGTNCATGGGCATGTCAGGCGACTTTGAACTTGCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGAGATGGGCAGTACAAATGTTCGAGTTGGATCTACTATATTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E726585" ref_strand="+" ref_description="SGN-E726585 [LA12BA07]">
      <seq>aaacaacaaaaggcgagaaaaaagattcattaagtgcagtgctggagacggaaccgtcagattcaggaatggctgctgcttccgctacggatggtgtcgctgcgacggcagtacggtcggtaattcagcggattgaacacgtggctgaacgatgtggccgcagatcggaccaagtaaggctggtggctgtaagcaaaactaagccagtatctctcctcaaacaagtttacgacgccggtcatcgttgtttcggtgaaaattacgtcaaagagctcattgagaaagctcctcagcttccagatgatatagagtggcatttcatagggaatttgcagagcaataaagtcaagccacttttaactggagtgccaaatcttgctatggtggagacagtagatgatgaaaagattgcaaatcagcttgaccgtgtggctgcgaacattggaagaaagccattgaaagtttttatccaagttaatacaagcggggaagaaactaaatctggtgttgaaccagatgggtgtctggaactcgtgaaacatgttacttcaaactgccctaatcttgaattctgtggcttgatgactattggaatgccagattatacatcgactcctgaaaactttaagactttagcaaaatgtagaagtgaagtttgcgaggcacttggaatatctgaagatcaatgtgagctgtcaatgggcatgtcaggcgactttgaacttgctgttgagatgggcagtacaaatgttcgagttggatctactatatttggtgcaagggaatatccaacgaagtagtcatcgaactangttgatgaacccagtttagtgaagagagcttgagccaaacatgtaccttaagatttgcag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="+" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="25079" stop="29765"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="25379" g_stop="25671" g_length="293"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="293" r_length="293" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="25672" i_stop="26593" i_length="922">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="26594" g_stop="26660" g_length="67"/>
          <reference_exon_boundary r_type="cDNA" r_start="294" r_stop="360" r_length="67" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="26661" i_stop="27137" i_length="477">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="27138" g_stop="27184" g_length="47"/>
          <reference_exon_boundary r_type="cDNA" r_start="361" r_stop="407" r_length="47" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="27185" i_stop="27822" i_length="638">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="27823" g_stop="27910" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="408" r_stop="495" r_length="88" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="27911" i_stop="28022" i_length="112">
            <donor d_prob="0.190" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="28023" g_stop="28156" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="496" r_stop="629" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="28157" i_stop="28250" i_length="94">
            <donor d_prob="0.716" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="28251" g_stop="28349" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="630" r_stop="728" r_length="99" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="28350" i_stop="29320" i_length="971">
            <donor d_prob="0.587" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="29321" g_stop="29465" g_length="145"/>
          <reference_exon_boundary r_type="cDNA" r_start="729" r_stop="872" r_length="144" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="+" ref_id="SGN-E726585" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>873</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E726585" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="25379" e_stop="25671"/>
          <exon e_start="26594" e_stop="26660"/>
          <exon e_start="27138" e_stop="27184"/>
          <exon e_start="27823" e_stop="27910"/>
          <exon e_start="28023" e_stop="28156"/>
          <exon e_start="28251" e_stop="28349"/>
          <exon e_start="29321" e_stop="29465"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAACAACAAAAGGCGAGAAAAAAGATTCATTAAGTGCAGTGCTGGAGACGGAACCGTCAGATTCAGGAATGGCTGCTGCTTCCGCTACGGATGGTGTCGCTGCGACGGCAGTACGGTCGGTAATTCAGCGGATTGAACACGTGGCTGAACGATGTGGCCGCAGATCGGACCAAGTAAGGCTGGTGGCTGTAAGCAAAACTAAGCCAGTATCTCTCCTCAAACAAGTTTACGACGCCGGTCATCGTTGTTTCGGTGAAAATTACGTCAAAGAGCTCATTGAGAAAGCTCCTCAGGTAAAGGTTCTATACTCGTGTGTGATGGCCACTACATAATCTAAGCATAGAAAACATATGATTGATTGGTTTGCTGATCGAATTTTTTTGTTTTATTTGACTTTAGGAGTCATTTTATTAAGGTTAAGTTTTATCCAATACAAATACTGTAGGCAAATTTTTGGGCTTATGTAATCTAATCCTGTCTTGTAGTTTAATTTCAATTAACTGGTATTTAGTATAGGAATGTTCTGCTTCAATTGTGTGTTGTTTTTAGCTTAGTATGGATTAATATTAAGACAAATTAGATCTTTTAAACAAATGCCCTTCAGGTATTTTTATGTTTTTGTTATTTGGGATACACTATATTTATAGGAAAATGAAGTTTTTCACCTGTAGCTGAATTGATTTTCTTTCTGAATATTGCCAAGAGGAGATAGTTTGCTTTTAGAATTATTGTTATAGCCCAACCTGCTTATGCACAGTATTGCCCGCTTTGTCCAATAGACCTTGCTGATTAATCCCTCGAGTAAGTCGAAAGATGCCTCAAGTGTGCTACCAAGTTACCTTATTATTTGTCATATACAGTTCAGGACTTTCCTGTCCCTTCCATGGTGTGAATCACCTAATATGTCTTCTACTTCAGAAGTTCACTAGCTTCAGAGTCTGCCAGTTCTTAACCTTTCACAGACATCATAATCACATTCAATTGGTGTTTTGCACTTGTTCATTCTTCTAAGATTTAGCCATGTCATGTATCAATTTTTTGATTATTTTCTTTGTTTTGGGCTAGTTAGTGCTTTTTTTTTTGTGTGTGAGAGAGTATTTTCTTCATGGTAAGTTTTATTTTTTATGTGGGCTGTTGAAAATTTCTGTGGGGAACAATGTGAAGTATTGTGTTTCAGATGAGGTGTTTATACTGCTATCCTTTGGTGAATTGCAGCTTCCAGATGATATAGAGTGGCATTTCATAGGGAATTTGCAGAGCAATAAAGTCAAGCCACTTTTAAGTATGTTCTCCTTCCTTCCTTCACTGTTCCTTCTCCCATCCTTTTCCTTATGGACCAATAAGGAGAAATGTACCTTTCTATGAAAATAGTTTCAGGATGAAGCGAAATCGTAAAAATCGTGATTACATGATAATTTTGTTGGAGAAACAAGGGGAGAAGACTTTTTTTTGGCGTCCTGGTGAAGTCCGTGGAGGGAAGGGTTGTTTCAAGAGTTGTAAACTTTATCTTGGTGAAAGAAACATACTTGCTTCATCAAATTTTGATTATATTAGGTACTGCAAATATTTTAAAAAATGCTAGATATGGTGAAACAGCTCGCCTTCACTTACATCAGTCAGATGATGGACAAAAAGATTCTATCTCCTCTCTGAGTTGGCATGCATGACATAACTTGAATGACGAATTTGAGCCACATTTTTGTGCAACGGGTATAAATGTATAGAGCTTATAATAAATTCTCGTCATCTTTGTTTTCAGCTGGAGTGCCAAATCTTGCTATGGTGGAGACAGTAGATGATGAAAAGGTAACTAACACAGACTCTGCTACTAATTTGTCTCCTAGTCCAGTAAATATCTTTAGAACATATTCTGGTTGTTGACTTGTTAATACAAACATCTTTTAACAATACAAAAAACATATGCCTAATAATGATTTCACTCTTAACTTTTGTTTCAATTCAAAAATCATTGTATTTATCTCGAATTTCTTGATCGGTTTTGGTCGAAGTATCCAAAATCGTTTGACCACATCTGGTACAAATCCCACACCTACATCCACGACGTGTCAACACAGGTGCGGCACCGAAAGTGAAGAGTCTGTGCAAGAAGGAAATAAAGCCGGTTTTAGTAAGAAAAAAAAAAGGGTTATTAAGTGAATTTAATAAGAAGCCTTTTTATTTTAATGCACATATTTAATTTATTCGGAGCTATTGGAGAGGGATAGACATTTGGGGAATATGAGTTGAAGCACTAACAAGAATATTTATACTATAATATTCAATATTGTGAGTAGTGTTTATTTTATTTTTGAGAATGGTTACCGTATATTTATTAGCATTAAGGAAATTTTGGCCACCATATTTACAGTTCAAAGAATTAGCAAAATCCTGTCCATCTTGCAAAGATTCTTATATTTTGTTTAATACTTTAATATATTTTGTAGATTGCAAATCAGCTTGACCGTGTGGCTGCGAACATTGGAAGAAAGCCATTGAAAGTTTTTATCCAAGTTAATACAAGCGGGGAAGAAAGTGGGTATCTGGAGTATGTCTCTGATTTATTAAGAGTCATTTGATCTATTTTTGTGAACACTACTATATTCATGAAGGAAAAGCTAATCATGATTTGATTCCATAATTGCAGCTAAATCTGGTGTTGAACCAGATGGGTGTCTGGAACTCGTGAAACATGTTACTTCAAACTGCCCTAATCTTGAATTCTGTGGCTTGATGACTATTGGAATGCCAGATTATACATCGACTCCTGAAAACTTTAAGGTTGAGGTTTTATCTTTGTTGTTTCTTCTTGGCCTGGTTGCTATTGTTATATCCTCAACTCAAATATGTTGCTATTTGTCATGCTTGGTTTCAGACTTTAGCAAAATGTAGAAGTGAAGTTTGCGAGGCACTTGGAATATCTGAAGATCAATGTGAGCTGTCAATGGGCATGTCAGGCGACTTTGAACTTGCTGTGAGTGACCTGACTTGTCACTAAGCACATCAAATCATTAGTAAGCTTGGAAGGAACTTGTATAACATGAGTTCTCTGGGGAGCATGTGGTAGTCTGAGTGCACCAATTATACAATCACTCTTTATAAATTAAACCAAAGTATTAACTAGACATCTGACTCAGTTTTCATTACTGGTCTCTGTTGTTAGAATCTTCTTGAGTCTGATGTATAATGCTTTATCGCTGGACAATAAACTCGCCCAGCTCCCCGCCACACCCATGGGATTAAGACGCTCAGACTAGGATTGTAGTTTCACCCCTTAACAGCTTGTTACAATTCAAGGGTTAGTCTGTTTTTATCTTTTGATAAGGTAAAAGTCATGTGACCCGGTTTGAACATTGGAACCAACTAGTGATGCTTATGTTAGTTAGGGTAAGCTGCCCGCCTATATCATACTTCTTGGGGGTGTGGATCTTCCTGGACCCTGTGTGAATGCCGGCTGCCCTTCATATTTGCGCTATTCTCTATCAGTTTCCCATGTGTACTTGTTTTCTGTGGCTGATATTATATATCTGTAGGGTGGATTGTTGTTAAAAGTAGAATTTCGTTTGACGCTCTCAAAAAAGAAAAGAAAAATTTAGTATCACAAGTAGAATTTTATTTGATTAGTTGTTGATTCTTTTGGGAGATCTTATCAGTGATGCGCTGTTCCAACCTCCATCCTACCTCCAATCTGATGACTAGTACTGCAGTCACCCATCAACCTATGCTTGTAGCCTATGGCCCCCTTAATTATGTAAGATATTTTCTTTTAAGGAGTAGTCTAGGCTATTGTATCAGGTAAGCATATTTTATCCTTGTGTCCTGCTATATTCAATAAAAGAAACAAGCACACATTCGTGCTTGCTAGCCAGCATTGGTATTGAATTCTACATATGCTTCGTTTGACCTCATGTTCTGCTATACTTATAATGCTGTCTATTACTACAGGTTGAGATGGGCAGTACAAATGTTCGAGTTGGATCTACTATATTTGGTGCAAGGGAATATCCAACGAAGTAGTCATCGAACTAGGTTGATGAACCCAGTTTAGTGAAGAGAGCTTGAGCCAAACATGTACCTTAAGATTTTGCAG</genome_strand>
        <mrna_strand>AAACAACAAAAGGCGAGAAAAAAGATTCATTAAGTGCAGTGCTGGAGACGGAACCGTCAGATTCAGGAATGGCTGCTGCTTCCGCTACGGATGGTGTCGCTGCGACGGCAGTACGGTCGGTAATTCAGCGGATTGAACACGTGGCTGAACGATGTGGCCGCAGATCGGACCAAGTAAGGCTGGTGGCTGTAAGCAAAACTAAGCCAGTATCTCTCCTCAAACAAGTTTACGACGCCGGTCATCGTTGTTTCGGTGAAAATTACGTCAAAGAGCTCATTGAGAAAGCTCCTCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCCAGATGATATAGAGTGGCATTTCATAGGGAATTTGCAGAGCAATAAAGTCAAGCCACTTTTAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGAGTGCCAAATCTTGCTATGGTGGAGACAGTAGATGATGAAAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCAAATCAGCTTGACCGTGTGGCTGCGAACATTGGAAGAAAGCCATTGAAAGTTTTTATCCAAGTTAATACAAGCGGGGAAGAAA................................................................................................................CTAAATCTGGTGTTGAACCAGATGGGTGTCTGGAACTCGTGAAACATGTTACTTCAAACTGCCCTAATCTTGAATTCTGTGGCTTGATGACTATTGGAATGCCAGATTATACATCGACTCCTGAAAACTTTAAG..............................................................................................ACTTTAGCAAAATGTAGAAGTGAAGTTTGCGAGGCACTTGGAATATCTGAAGATCAATGTGAGCTGTCAATGGGCATGTCAGGCGACTTTGAACTTGCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGAGATGGGCAGTACAAATGTTCGAGTTGGATCTACTATATTTGGTGCAAGGGAATATCCAACGAAGTAGTCATCGAACTANGTTGATGAACCCAGTTTAGTGAAGAGAGCTTGAGCCAAACATGTACCTTAAGA-TTTGCAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E347860" ref_strand="+" ref_description="SGN-E347860 [cTOF-31-E15]">
      <seq>aaacaacaaaaggcgagaaaaaagattcattaagtgcagtgctggagacggaaccgtcagattcaggaatggctgctgcttccgctacggatggtgtcgctgcgacggcagtacggtcggtaattcagcggattgaacacgtggctgaacgatgtggccgcagatcggaccaagtaaggctggtggctgtaagcaaaactaagccagtatctctcctcaaacaagtttacgacgccggtcatcgttgtttcggtgaaaattacgtcaaagagctcattgagaaagctcctcagcttccagatgatatagagtggcatttcatagggaatttgcagagcaataaagtcaagccacttttaactggagtgccaaatcttgctatggtggagacagtagatgatgaaaagattgcaaatcagcttgaccgtgtggctgcgaacattggaagaaagccattgaaagtttttatccaagttaatacaagcggggaagaaactaaatctggtgttgaaccagatgggtgtctggaactcgtgaaacatgttacttcaaactgccctaatcttgaattctgtggctcgatgactattggaatgccagattatacatcgactcctgaaaactttaagactttagcaaaatgtagaagtgaagtttgcgaggcacttggaatatctgaagatcaatgtgagctgtcaatgggcatgtcaggcgactttgaacttgctgntgaatgggcagtacaaatgttcgagttggatctac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="+" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="25079" stop="29658"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="25379" g_stop="25671" g_length="293"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="293" r_length="293" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="25672" i_stop="26593" i_length="922">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="26594" g_stop="26660" g_length="67"/>
          <reference_exon_boundary r_type="cDNA" r_start="294" r_stop="360" r_length="67" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="26661" i_stop="27137" i_length="477">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="27138" g_stop="27184" g_length="47"/>
          <reference_exon_boundary r_type="cDNA" r_start="361" r_stop="407" r_length="47" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="27185" i_stop="27822" i_length="638">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="27823" g_stop="27910" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="408" r_stop="495" r_length="88" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="27911" i_stop="28022" i_length="112">
            <donor d_prob="0.190" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="28023" g_stop="28156" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="496" r_stop="629" r_length="134" r_score="0.993"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="28157" i_stop="28250" i_length="94">
            <donor d_prob="0.716" d_score="0.98"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="28251" g_stop="28349" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="630" r_stop="728" r_length="99" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="28350" i_stop="29320" i_length="971">
            <donor d_prob="0.587" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="29321" g_stop="29358" g_length="38"/>
          <reference_exon_boundary r_type="cDNA" r_start="729" r_stop="765" r_length="37" r_score="0.947"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="+" ref_id="SGN-E347860" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>766</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E347860" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="25379" e_stop="25671"/>
          <exon e_start="26594" e_stop="26660"/>
          <exon e_start="27138" e_stop="27184"/>
          <exon e_start="27823" e_stop="27910"/>
          <exon e_start="28023" e_stop="28156"/>
          <exon e_start="28251" e_stop="28349"/>
          <exon e_start="29321" e_stop="29358"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAACAACAAAAGGCGAGAAAAAAGATTCATTAAGTGCAGTGCTGGAGACGGAACCGTCAGATTCAGGAATGGCTGCTGCTTCCGCTACGGATGGTGTCGCTGCGACGGCAGTACGGTCGGTAATTCAGCGGATTGAACACGTGGCTGAACGATGTGGCCGCAGATCGGACCAAGTAAGGCTGGTGGCTGTAAGCAAAACTAAGCCAGTATCTCTCCTCAAACAAGTTTACGACGCCGGTCATCGTTGTTTCGGTGAAAATTACGTCAAAGAGCTCATTGAGAAAGCTCCTCAGGTAAAGGTTCTATACTCGTGTGTGATGGCCACTACATAATCTAAGCATAGAAAACATATGATTGATTGGTTTGCTGATCGAATTTTTTTGTTTTATTTGACTTTAGGAGTCATTTTATTAAGGTTAAGTTTTATCCAATACAAATACTGTAGGCAAATTTTTGGGCTTATGTAATCTAATCCTGTCTTGTAGTTTAATTTCAATTAACTGGTATTTAGTATAGGAATGTTCTGCTTCAATTGTGTGTTGTTTTTAGCTTAGTATGGATTAATATTAAGACAAATTAGATCTTTTAAACAAATGCCCTTCAGGTATTTTTATGTTTTTGTTATTTGGGATACACTATATTTATAGGAAAATGAAGTTTTTCACCTGTAGCTGAATTGATTTTCTTTCTGAATATTGCCAAGAGGAGATAGTTTGCTTTTAGAATTATTGTTATAGCCCAACCTGCTTATGCACAGTATTGCCCGCTTTGTCCAATAGACCTTGCTGATTAATCCCTCGAGTAAGTCGAAAGATGCCTCAAGTGTGCTACCAAGTTACCTTATTATTTGTCATATACAGTTCAGGACTTTCCTGTCCCTTCCATGGTGTGAATCACCTAATATGTCTTCTACTTCAGAAGTTCACTAGCTTCAGAGTCTGCCAGTTCTTAACCTTTCACAGACATCATAATCACATTCAATTGGTGTTTTGCACTTGTTCATTCTTCTAAGATTTAGCCATGTCATGTATCAATTTTTTGATTATTTTCTTTGTTTTGGGCTAGTTAGTGCTTTTTTTTTTGTGTGTGAGAGAGTATTTTCTTCATGGTAAGTTTTATTTTTTATGTGGGCTGTTGAAAATTTCTGTGGGGAACAATGTGAAGTATTGTGTTTCAGATGAGGTGTTTATACTGCTATCCTTTGGTGAATTGCAGCTTCCAGATGATATAGAGTGGCATTTCATAGGGAATTTGCAGAGCAATAAAGTCAAGCCACTTTTAAGTATGTTCTCCTTCCTTCCTTCACTGTTCCTTCTCCCATCCTTTTCCTTATGGACCAATAAGGAGAAATGTACCTTTCTATGAAAATAGTTTCAGGATGAAGCGAAATCGTAAAAATCGTGATTACATGATAATTTTGTTGGAGAAACAAGGGGAGAAGACTTTTTTTTGGCGTCCTGGTGAAGTCCGTGGAGGGAAGGGTTGTTTCAAGAGTTGTAAACTTTATCTTGGTGAAAGAAACATACTTGCTTCATCAAATTTTGATTATATTAGGTACTGCAAATATTTTAAAAAATGCTAGATATGGTGAAACAGCTCGCCTTCACTTACATCAGTCAGATGATGGACAAAAAGATTCTATCTCCTCTCTGAGTTGGCATGCATGACATAACTTGAATGACGAATTTGAGCCACATTTTTGTGCAACGGGTATAAATGTATAGAGCTTATAATAAATTCTCGTCATCTTTGTTTTCAGCTGGAGTGCCAAATCTTGCTATGGTGGAGACAGTAGATGATGAAAAGGTAACTAACACAGACTCTGCTACTAATTTGTCTCCTAGTCCAGTAAATATCTTTAGAACATATTCTGGTTGTTGACTTGTTAATACAAACATCTTTTAACAATACAAAAAACATATGCCTAATAATGATTTCACTCTTAACTTTTGTTTCAATTCAAAAATCATTGTATTTATCTCGAATTTCTTGATCGGTTTTGGTCGAAGTATCCAAAATCGTTTGACCACATCTGGTACAAATCCCACACCTACATCCACGACGTGTCAACACAGGTGCGGCACCGAAAGTGAAGAGTCTGTGCAAGAAGGAAATAAAGCCGGTTTTAGTAAGAAAAAAAAAAGGGTTATTAAGTGAATTTAATAAGAAGCCTTTTTATTTTAATGCACATATTTAATTTATTCGGAGCTATTGGAGAGGGATAGACATTTGGGGAATATGAGTTGAAGCACTAACAAGAATATTTATACTATAATATTCAATATTGTGAGTAGTGTTTATTTTATTTTTGAGAATGGTTACCGTATATTTATTAGCATTAAGGAAATTTTGGCCACCATATTTACAGTTCAAAGAATTAGCAAAATCCTGTCCATCTTGCAAAGATTCTTATATTTTGTTTAATACTTTAATATATTTTGTAGATTGCAAATCAGCTTGACCGTGTGGCTGCGAACATTGGAAGAAAGCCATTGAAAGTTTTTATCCAAGTTAATACAAGCGGGGAAGAAAGTGGGTATCTGGAGTATGTCTCTGATTTATTAAGAGTCATTTGATCTATTTTTGTGAACACTACTATATTCATGAAGGAAAAGCTAATCATGATTTGATTCCATAATTGCAGCTAAATCTGGTGTTGAACCAGATGGGTGTCTGGAACTCGTGAAACATGTTACTTCAAACTGCCCTAATCTTGAATTCTGTGGCTTGATGACTATTGGAATGCCAGATTATACATCGACTCCTGAAAACTTTAAGGTTGAGGTTTTATCTTTGTTGTTTCTTCTTGGCCTGGTTGCTATTGTTATATCCTCAACTCAAATATGTTGCTATTTGTCATGCTTGGTTTCAGACTTTAGCAAAATGTAGAAGTGAAGTTTGCGAGGCACTTGGAATATCTGAAGATCAATGTGAGCTGTCAATGGGCATGTCAGGCGACTTTGAACTTGCTGTGAGTGACCTGACTTGTCACTAAGCACATCAAATCATTAGTAAGCTTGGAAGGAACTTGTATAACATGAGTTCTCTGGGGAGCATGTGGTAGTCTGAGTGCACCAATTATACAATCACTCTTTATAAATTAAACCAAAGTATTAACTAGACATCTGACTCAGTTTTCATTACTGGTCTCTGTTGTTAGAATCTTCTTGAGTCTGATGTATAATGCTTTATCGCTGGACAATAAACTCGCCCAGCTCCCCGCCACACCCATGGGATTAAGACGCTCAGACTAGGATTGTAGTTTCACCCCTTAACAGCTTGTTACAATTCAAGGGTTAGTCTGTTTTTATCTTTTGATAAGGTAAAAGTCATGTGACCCGGTTTGAACATTGGAACCAACTAGTGATGCTTATGTTAGTTAGGGTAAGCTGCCCGCCTATATCATACTTCTTGGGGGTGTGGATCTTCCTGGACCCTGTGTGAATGCCGGCTGCCCTTCATATTTGCGCTATTCTCTATCAGTTTCCCATGTGTACTTGTTTTCTGTGGCTGATATTATATATCTGTAGGGTGGATTGTTGTTAAAAGTAGAATTTCGTTTGACGCTCTCAAAAAAGAAAAGAAAAATTTAGTATCACAAGTAGAATTTTATTTGATTAGTTGTTGATTCTTTTGGGAGATCTTATCAGTGATGCGCTGTTCCAACCTCCATCCTACCTCCAATCTGATGACTAGTACTGCAGTCACCCATCAACCTATGCTTGTAGCCTATGGCCCCCTTAATTATGTAAGATATTTTCTTTTAAGGAGTAGTCTAGGCTATTGTATCAGGTAAGCATATTTTATCCTTGTGTCCTGCTATATTCAATAAAAGAAACAAGCACACATTCGTGCTTGCTAGCCAGCATTGGTATTGAATTCTACATATGCTTCGTTTGACCTCATGTTCTGCTATACTTATAATGCTGTCTATTACTACAGGTTGAGATGGGCAGTACAAATGTTCGAGTTGGATCTAC</genome_strand>
        <mrna_strand>AAACAACAAAAGGCGAGAAAAAAGATTCATTAAGTGCAGTGCTGGAGACGGAACCGTCAGATTCAGGAATGGCTGCTGCTTCCGCTACGGATGGTGTCGCTGCGACGGCAGTACGGTCGGTAATTCAGCGGATTGAACACGTGGCTGAACGATGTGGCCGCAGATCGGACCAAGTAAGGCTGGTGGCTGTAAGCAAAACTAAGCCAGTATCTCTCCTCAAACAAGTTTACGACGCCGGTCATCGTTGTTTCGGTGAAAATTACGTCAAAGAGCTCATTGAGAAAGCTCCTCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCCAGATGATATAGAGTGGCATTTCATAGGGAATTTGCAGAGCAATAAAGTCAAGCCACTTTTAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGAGTGCCAAATCTTGCTATGGTGGAGACAGTAGATGATGAAAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCAAATCAGCTTGACCGTGTGGCTGCGAACATTGGAAGAAAGCCATTGAAAGTTTTTATCCAAGTTAATACAAGCGGGGAAGAAA................................................................................................................CTAAATCTGGTGTTGAACCAGATGGGTGTCTGGAACTCGTGAAACATGTTACTTCAAACTGCCCTAATCTTGAATTCTGTGGCTCGATGACTATTGGAATGCCAGATTATACATCGACTCCTGAAAACTTTAAG..............................................................................................ACTTTAGCAAAATGTAGAAGTGAAGTTTGCGAGGCACTTGGAATATCTGAAGATCAATGTGAGCTGTCAATGGGCATGTCAGGCGACTTTGAACTTGCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GNTGA-ATGGGCAGTACAAATGTTCGAGTTGGATCTAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E332949" ref_strand="+" ref_description="SGN-E332949 [cTOD-19-F23]">
      <seq>aacaacaaaaggcgagaaaaaagattcattaagtgcagtgctggagacggaaccgtcagattcaggaatggctgctgcttccgctacggatggtgtcgctgcgacggcagtacggtcggtaattcagcggattgaacacgtggctgaacgatgtggccgcagatcggaccaagtaaggctggtggctgtaagcaaaactaagccagtatctctcctcaaacaagtttacgacgccggtcatcgttgtttcggtgaaaattacgtcaaagagctcattgagaaagctcctcagcttccagatgatatagagtggcatttcatagggaatttgcagagcaataaagtcaagccacttttaactggagtgccaaatcttgctatggtggagacagtagatgatgaaaagattgcaaatcagcttgaccgtgtggctgcgaacattggaagaaagccattgaaagtttttatccaagttaatacaagcggggaagaaactaaatctggtgttgaaccagatgggtgtctggaactcgtgaaacatgttacttcaaactgccctaatcttgaattctgtggcttgatgactattggaatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="+" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="25080" stop="28423"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="25380" g_stop="25671" g_length="292"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="292" r_length="292" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="25672" i_stop="26593" i_length="922">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="26594" g_stop="26660" g_length="67"/>
          <reference_exon_boundary r_type="cDNA" r_start="293" r_stop="359" r_length="67" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="26661" i_stop="27137" i_length="477">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="27138" g_stop="27184" g_length="47"/>
          <reference_exon_boundary r_type="cDNA" r_start="360" r_stop="406" r_length="47" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="27185" i_stop="27822" i_length="638">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="27823" g_stop="27910" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="407" r_stop="494" r_length="88" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="27911" i_stop="28022" i_length="112">
            <donor d_prob="0.190" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="28023" g_stop="28123" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="495" r_stop="595" r_length="101" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="+" ref_id="SGN-E332949" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>595</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E332949" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="25380" e_stop="25671"/>
          <exon e_start="26594" e_stop="26660"/>
          <exon e_start="27138" e_stop="27184"/>
          <exon e_start="27823" e_stop="27910"/>
          <exon e_start="28023" e_stop="28123"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACAACAAAAGGCGAGAAAAAAGATTCATTAAGTGCAGTGCTGGAGACGGAACCGTCAGATTCAGGAATGGCTGCTGCTTCCGCTACGGATGGTGTCGCTGCGACGGCAGTACGGTCGGTAATTCAGCGGATTGAACACGTGGCTGAACGATGTGGCCGCAGATCGGACCAAGTAAGGCTGGTGGCTGTAAGCAAAACTAAGCCAGTATCTCTCCTCAAACAAGTTTACGACGCCGGTCATCGTTGTTTCGGTGAAAATTACGTCAAAGAGCTCATTGAGAAAGCTCCTCAGGTAAAGGTTCTATACTCGTGTGTGATGGCCACTACATAATCTAAGCATAGAAAACATATGATTGATTGGTTTGCTGATCGAATTTTTTTGTTTTATTTGACTTTAGGAGTCATTTTATTAAGGTTAAGTTTTATCCAATACAAATACTGTAGGCAAATTTTTGGGCTTATGTAATCTAATCCTGTCTTGTAGTTTAATTTCAATTAACTGGTATTTAGTATAGGAATGTTCTGCTTCAATTGTGTGTTGTTTTTAGCTTAGTATGGATTAATATTAAGACAAATTAGATCTTTTAAACAAATGCCCTTCAGGTATTTTTATGTTTTTGTTATTTGGGATACACTATATTTATAGGAAAATGAAGTTTTTCACCTGTAGCTGAATTGATTTTCTTTCTGAATATTGCCAAGAGGAGATAGTTTGCTTTTAGAATTATTGTTATAGCCCAACCTGCTTATGCACAGTATTGCCCGCTTTGTCCAATAGACCTTGCTGATTAATCCCTCGAGTAAGTCGAAAGATGCCTCAAGTGTGCTACCAAGTTACCTTATTATTTGTCATATACAGTTCAGGACTTTCCTGTCCCTTCCATGGTGTGAATCACCTAATATGTCTTCTACTTCAGAAGTTCACTAGCTTCAGAGTCTGCCAGTTCTTAACCTTTCACAGACATCATAATCACATTCAATTGGTGTTTTGCACTTGTTCATTCTTCTAAGATTTAGCCATGTCATGTATCAATTTTTTGATTATTTTCTTTGTTTTGGGCTAGTTAGTGCTTTTTTTTTTGTGTGTGAGAGAGTATTTTCTTCATGGTAAGTTTTATTTTTTATGTGGGCTGTTGAAAATTTCTGTGGGGAACAATGTGAAGTATTGTGTTTCAGATGAGGTGTTTATACTGCTATCCTTTGGTGAATTGCAGCTTCCAGATGATATAGAGTGGCATTTCATAGGGAATTTGCAGAGCAATAAAGTCAAGCCACTTTTAAGTATGTTCTCCTTCCTTCCTTCACTGTTCCTTCTCCCATCCTTTTCCTTATGGACCAATAAGGAGAAATGTACCTTTCTATGAAAATAGTTTCAGGATGAAGCGAAATCGTAAAAATCGTGATTACATGATAATTTTGTTGGAGAAACAAGGGGAGAAGACTTTTTTTTGGCGTCCTGGTGAAGTCCGTGGAGGGAAGGGTTGTTTCAAGAGTTGTAAACTTTATCTTGGTGAAAGAAACATACTTGCTTCATCAAATTTTGATTATATTAGGTACTGCAAATATTTTAAAAAATGCTAGATATGGTGAAACAGCTCGCCTTCACTTACATCAGTCAGATGATGGACAAAAAGATTCTATCTCCTCTCTGAGTTGGCATGCATGACATAACTTGAATGACGAATTTGAGCCACATTTTTGTGCAACGGGTATAAATGTATAGAGCTTATAATAAATTCTCGTCATCTTTGTTTTCAGCTGGAGTGCCAAATCTTGCTATGGTGGAGACAGTAGATGATGAAAAGGTAACTAACACAGACTCTGCTACTAATTTGTCTCCTAGTCCAGTAAATATCTTTAGAACATATTCTGGTTGTTGACTTGTTAATACAAACATCTTTTAACAATACAAAAAACATATGCCTAATAATGATTTCACTCTTAACTTTTGTTTCAATTCAAAAATCATTGTATTTATCTCGAATTTCTTGATCGGTTTTGGTCGAAGTATCCAAAATCGTTTGACCACATCTGGTACAAATCCCACACCTACATCCACGACGTGTCAACACAGGTGCGGCACCGAAAGTGAAGAGTCTGTGCAAGAAGGAAATAAAGCCGGTTTTAGTAAGAAAAAAAAAAGGGTTATTAAGTGAATTTAATAAGAAGCCTTTTTATTTTAATGCACATATTTAATTTATTCGGAGCTATTGGAGAGGGATAGACATTTGGGGAATATGAGTTGAAGCACTAACAAGAATATTTATACTATAATATTCAATATTGTGAGTAGTGTTTATTTTATTTTTGAGAATGGTTACCGTATATTTATTAGCATTAAGGAAATTTTGGCCACCATATTTACAGTTCAAAGAATTAGCAAAATCCTGTCCATCTTGCAAAGATTCTTATATTTTGTTTAATACTTTAATATATTTTGTAGATTGCAAATCAGCTTGACCGTGTGGCTGCGAACATTGGAAGAAAGCCATTGAAAGTTTTTATCCAAGTTAATACAAGCGGGGAAGAAAGTGGGTATCTGGAGTATGTCTCTGATTTATTAAGAGTCATTTGATCTATTTTTGTGAACACTACTATATTCATGAAGGAAAAGCTAATCATGATTTGATTCCATAATTGCAGCTAAATCTGGTGTTGAACCAGATGGGTGTCTGGAACTCGTGAAACATGTTACTTCAAACTGCCCTAATCTTGAATTCTGTGGCTTGATGACTATTGGAATG</genome_strand>
        <mrna_strand>AACAACAAAAGGCGAGAAAAAAGATTCATTAAGTGCAGTGCTGGAGACGGAACCGTCAGATTCAGGAATGGCTGCTGCTTCCGCTACGGATGGTGTCGCTGCGACGGCAGTACGGTCGGTAATTCAGCGGATTGAACACGTGGCTGAACGATGTGGCCGCAGATCGGACCAAGTAAGGCTGGTGGCTGTAAGCAAAACTAAGCCAGTATCTCTCCTCAAACAAGTTTACGACGCCGGTCATCGTTGTTTCGGTGAAAATTACGTCAAAGAGCTCATTGAGAAAGCTCCTCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCCAGATGATATAGAGTGGCATTTCATAGGGAATTTGCAGAGCAATAAAGTCAAGCCACTTTTAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGAGTGCCAAATCTTGCTATGGTGGAGACAGTAGATGATGAAAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCAAATCAGCTTGACCGTGTGGCTGCGAACATTGGAAGAAAGCCATTGAAAGTTTTTATCCAAGTTAATACAAGCGGGGAAGAAA................................................................................................................CTAAATCTGGTGTTGAACCAGATGGGTGTCTGGAACTCGTGAAACATGTTACTTCAAACTGCCCTAATCTTGAATTCTGTGGCTTGATGACTATTGGAATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E316203" ref_strand="+" ref_description="SGN-E316203 [cTOA-23-A14]">
      <seq>aacaaaaggcgagaaaaaagattcattaagtgcagtgctggagacggaaccgtcagattcaggaatggctgctgcttccgctacggatggtgtcgctgcgacggcagtacggtcggtaattcagcggattgaacacgtggctgaacgatgtggccgcagatcggaccaagtaaggctggtggctgtaagcaaaactaagccagtatctctcctcaaacaagtttacgacgccggtcatcgttgtttcggtgaaaattacgtcaaagagctcattgagaaagctcctcagcttccagatgatatagagtggcatttcatagggaatttgcagagcaataaagtcaagccacttttaactggagtgccaaatcttgctatggtggagacagtagatgatgaaaagattgcaaatcagcttgaccgtgtggctgcgaacattggaagaaagccattgaaagtttttatccaagttaatacaagcggggaagaaactaaatctggtgttgaaccagatgggtgtctggaactcgtgaaacatgttacttcaaactgccctaatcttgaattctgtggcttgatgactattgggatgccagattatacatcgactcctgaaaactttaagactttagcaaaatgtagaagtgaagtttgcgaggcacttggaatatctgaagatcaatgtgagctgtcaatgggcatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="+" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="25083" stop="28628"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="25383" g_stop="25671" g_length="289"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="289" r_length="289" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="25672" i_stop="26593" i_length="922">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="26594" g_stop="26660" g_length="67"/>
          <reference_exon_boundary r_type="cDNA" r_start="290" r_stop="356" r_length="67" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="26661" i_stop="27137" i_length="477">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="27138" g_stop="27184" g_length="47"/>
          <reference_exon_boundary r_type="cDNA" r_start="357" r_stop="403" r_length="47" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="27185" i_stop="27822" i_length="638">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="27823" g_stop="27910" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="404" r_stop="491" r_length="88" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="27911" i_stop="28022" i_length="112">
            <donor d_prob="0.190" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="28023" g_stop="28156" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="492" r_stop="625" r_length="134" r_score="0.993"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="28157" i_stop="28250" i_length="94">
            <donor d_prob="0.716" d_score="0.98"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="28251" g_stop="28328" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="626" r_stop="703" r_length="78" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="+" ref_id="SGN-E316203" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>703</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E316203" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="25383" e_stop="25671"/>
          <exon e_start="26594" e_stop="26660"/>
          <exon e_start="27138" e_stop="27184"/>
          <exon e_start="27823" e_stop="27910"/>
          <exon e_start="28023" e_stop="28156"/>
          <exon e_start="28251" e_stop="28328"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACAAAAGGCGAGAAAAAAGATTCATTAAGTGCAGTGCTGGAGACGGAACCGTCAGATTCAGGAATGGCTGCTGCTTCCGCTACGGATGGTGTCGCTGCGACGGCAGTACGGTCGGTAATTCAGCGGATTGAACACGTGGCTGAACGATGTGGCCGCAGATCGGACCAAGTAAGGCTGGTGGCTGTAAGCAAAACTAAGCCAGTATCTCTCCTCAAACAAGTTTACGACGCCGGTCATCGTTGTTTCGGTGAAAATTACGTCAAAGAGCTCATTGAGAAAGCTCCTCAGGTAAAGGTTCTATACTCGTGTGTGATGGCCACTACATAATCTAAGCATAGAAAACATATGATTGATTGGTTTGCTGATCGAATTTTTTTGTTTTATTTGACTTTAGGAGTCATTTTATTAAGGTTAAGTTTTATCCAATACAAATACTGTAGGCAAATTTTTGGGCTTATGTAATCTAATCCTGTCTTGTAGTTTAATTTCAATTAACTGGTATTTAGTATAGGAATGTTCTGCTTCAATTGTGTGTTGTTTTTAGCTTAGTATGGATTAATATTAAGACAAATTAGATCTTTTAAACAAATGCCCTTCAGGTATTTTTATGTTTTTGTTATTTGGGATACACTATATTTATAGGAAAATGAAGTTTTTCACCTGTAGCTGAATTGATTTTCTTTCTGAATATTGCCAAGAGGAGATAGTTTGCTTTTAGAATTATTGTTATAGCCCAACCTGCTTATGCACAGTATTGCCCGCTTTGTCCAATAGACCTTGCTGATTAATCCCTCGAGTAAGTCGAAAGATGCCTCAAGTGTGCTACCAAGTTACCTTATTATTTGTCATATACAGTTCAGGACTTTCCTGTCCCTTCCATGGTGTGAATCACCTAATATGTCTTCTACTTCAGAAGTTCACTAGCTTCAGAGTCTGCCAGTTCTTAACCTTTCACAGACATCATAATCACATTCAATTGGTGTTTTGCACTTGTTCATTCTTCTAAGATTTAGCCATGTCATGTATCAATTTTTTGATTATTTTCTTTGTTTTGGGCTAGTTAGTGCTTTTTTTTTTGTGTGTGAGAGAGTATTTTCTTCATGGTAAGTTTTATTTTTTATGTGGGCTGTTGAAAATTTCTGTGGGGAACAATGTGAAGTATTGTGTTTCAGATGAGGTGTTTATACTGCTATCCTTTGGTGAATTGCAGCTTCCAGATGATATAGAGTGGCATTTCATAGGGAATTTGCAGAGCAATAAAGTCAAGCCACTTTTAAGTATGTTCTCCTTCCTTCCTTCACTGTTCCTTCTCCCATCCTTTTCCTTATGGACCAATAAGGAGAAATGTACCTTTCTATGAAAATAGTTTCAGGATGAAGCGAAATCGTAAAAATCGTGATTACATGATAATTTTGTTGGAGAAACAAGGGGAGAAGACTTTTTTTTGGCGTCCTGGTGAAGTCCGTGGAGGGAAGGGTTGTTTCAAGAGTTGTAAACTTTATCTTGGTGAAAGAAACATACTTGCTTCATCAAATTTTGATTATATTAGGTACTGCAAATATTTTAAAAAATGCTAGATATGGTGAAACAGCTCGCCTTCACTTACATCAGTCAGATGATGGACAAAAAGATTCTATCTCCTCTCTGAGTTGGCATGCATGACATAACTTGAATGACGAATTTGAGCCACATTTTTGTGCAACGGGTATAAATGTATAGAGCTTATAATAAATTCTCGTCATCTTTGTTTTCAGCTGGAGTGCCAAATCTTGCTATGGTGGAGACAGTAGATGATGAAAAGGTAACTAACACAGACTCTGCTACTAATTTGTCTCCTAGTCCAGTAAATATCTTTAGAACATATTCTGGTTGTTGACTTGTTAATACAAACATCTTTTAACAATACAAAAAACATATGCCTAATAATGATTTCACTCTTAACTTTTGTTTCAATTCAAAAATCATTGTATTTATCTCGAATTTCTTGATCGGTTTTGGTCGAAGTATCCAAAATCGTTTGACCACATCTGGTACAAATCCCACACCTACATCCACGACGTGTCAACACAGGTGCGGCACCGAAAGTGAAGAGTCTGTGCAAGAAGGAAATAAAGCCGGTTTTAGTAAGAAAAAAAAAAGGGTTATTAAGTGAATTTAATAAGAAGCCTTTTTATTTTAATGCACATATTTAATTTATTCGGAGCTATTGGAGAGGGATAGACATTTGGGGAATATGAGTTGAAGCACTAACAAGAATATTTATACTATAATATTCAATATTGTGAGTAGTGTTTATTTTATTTTTGAGAATGGTTACCGTATATTTATTAGCATTAAGGAAATTTTGGCCACCATATTTACAGTTCAAAGAATTAGCAAAATCCTGTCCATCTTGCAAAGATTCTTATATTTTGTTTAATACTTTAATATATTTTGTAGATTGCAAATCAGCTTGACCGTGTGGCTGCGAACATTGGAAGAAAGCCATTGAAAGTTTTTATCCAAGTTAATACAAGCGGGGAAGAAAGTGGGTATCTGGAGTATGTCTCTGATTTATTAAGAGTCATTTGATCTATTTTTGTGAACACTACTATATTCATGAAGGAAAAGCTAATCATGATTTGATTCCATAATTGCAGCTAAATCTGGTGTTGAACCAGATGGGTGTCTGGAACTCGTGAAACATGTTACTTCAAACTGCCCTAATCTTGAATTCTGTGGCTTGATGACTATTGGAATGCCAGATTATACATCGACTCCTGAAAACTTTAAGGTTGAGGTTTTATCTTTGTTGTTTCTTCTTGGCCTGGTTGCTATTGTTATATCCTCAACTCAAATATGTTGCTATTTGTCATGCTTGGTTTCAGACTTTAGCAAAATGTAGAAGTGAAGTTTGCGAGGCACTTGGAATATCTGAAGATCAATGTGAGCTGTCAATGGGCATG</genome_strand>
        <mrna_strand>AACAAAAGGCGAGAAAAAAGATTCATTAAGTGCAGTGCTGGAGACGGAACCGTCAGATTCAGGAATGGCTGCTGCTTCCGCTACGGATGGTGTCGCTGCGACGGCAGTACGGTCGGTAATTCAGCGGATTGAACACGTGGCTGAACGATGTGGCCGCAGATCGGACCAAGTAAGGCTGGTGGCTGTAAGCAAAACTAAGCCAGTATCTCTCCTCAAACAAGTTTACGACGCCGGTCATCGTTGTTTCGGTGAAAATTACGTCAAAGAGCTCATTGAGAAAGCTCCTCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCCAGATGATATAGAGTGGCATTTCATAGGGAATTTGCAGAGCAATAAAGTCAAGCCACTTTTAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGAGTGCCAAATCTTGCTATGGTGGAGACAGTAGATGATGAAAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCAAATCAGCTTGACCGTGTGGCTGCGAACATTGGAAGAAAGCCATTGAAAGTTTTTATCCAAGTTAATACAAGCGGGGAAGAAA................................................................................................................CTAAATCTGGTGTTGAACCAGATGGGTGTCTGGAACTCGTGAAACATGTTACTTCAAACTGCCCTAATCTTGAATTCTGTGGCTTGATGACTATTGGGATGCCAGATTATACATCGACTCCTGAAAACTTTAAG..............................................................................................ACTTTAGCAAAATGTAGAAGTGAAGTTTGCGAGGCACTTGGAATATCTGAAGATCAATGTGAGCTGTCAATGGGCATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E735956" ref_strand="+" ref_description="SGN-E735956 [LC03DC10]">
      <seq>cgattaagtgcagtgctggagacggaaccgtcagattcaggaatggctgctgcttccgctacggatggtgtcgctgcgacggcagtacggtcggtaattcagcggattgaacacgtggctgaacgatgtggccgcagatcggaccaagtaaggctggtggctgtaagcaaaactaagccagtatctctcctcaaacaagtttacgacgccggtcatcgttgtttcggtgaaaattacgtcaaagagctcattgagaaagctcctcagcttccagatgatatagagtggcatttcatagggaatttgcagagcaataaagtcaagccacttttaactggagtgccaaatcttgctatggtggagacagtagatgatgaaaagattgcaaatcagcttgaccgtgtggctgcgaacattggaagaaagccattgaaagtttttatccaagttaatacaagcggggaagaaagtgggtatctggactaaatctggtgttgaaccagatgggtgtctggaactcgtgaaacatgttacttcaaactgccctaatcttgaattctgtggcttgatgactattggaatgccagattatacatcgactcctgaaaactttaagactttagcaaaatgtagaagtgaagtttgcgaggcacttggaatatctgaagatcaatgtgagctgtcaatgggcatgtcaggcgactttgaacttgctgtgagtgacctgacttgtcactaaccacatcaaatcattagtaagcttggaaggaacttgtataacatgaactctctggggagcatgtggtagtctgagtgcaccaattatacatcactctttataa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="+" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="25107" stop="28777"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="25405" g_stop="25671" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="267" r_length="267" r_score="0.993"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="25672" i_stop="26593" i_length="922">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="26594" g_stop="26660" g_length="67"/>
          <reference_exon_boundary r_type="cDNA" r_start="268" r_stop="334" r_length="67" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="26661" i_stop="27137" i_length="477">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="27138" g_stop="27184" g_length="47"/>
          <reference_exon_boundary r_type="cDNA" r_start="335" r_stop="381" r_length="47" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="27185" i_stop="27822" i_length="638">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="27823" g_stop="27923" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="382" r_stop="482" r_length="101" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="27924" i_stop="28022" i_length="99">
            <donor d_prob="0.798" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="28023" g_stop="28156" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="483" r_stop="616" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="28157" i_stop="28250" i_length="94">
            <donor d_prob="0.716" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="28251" g_stop="28477" g_length="227"/>
          <reference_exon_boundary r_type="cDNA" r_start="617" r_stop="842" r_length="226" r_score="0.982"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="+" ref_id="SGN-E735956" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>843</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E735956" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="25405" e_stop="25671"/>
          <exon e_start="26594" e_stop="26660"/>
          <exon e_start="27138" e_stop="27184"/>
          <exon e_start="27823" e_stop="27923"/>
          <exon e_start="28023" e_stop="28156"/>
          <exon e_start="28251" e_stop="28477"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCATTAAGTGCAGTGCTGGAGACGGAACCGTCAGATTCAGGAATGGCTGCTGCTTCCGCTACGGATGGTGTCGCTGCGACGGCAGTACGGTCGGTAATTCAGCGGATTGAACACGTGGCTGAACGATGTGGCCGCAGATCGGACCAAGTAAGGCTGGTGGCTGTAAGCAAAACTAAGCCAGTATCTCTCCTCAAACAAGTTTACGACGCCGGTCATCGTTGTTTCGGTGAAAATTACGTCAAAGAGCTCATTGAGAAAGCTCCTCAGGTAAAGGTTCTATACTCGTGTGTGATGGCCACTACATAATCTAAGCATAGAAAACATATGATTGATTGGTTTGCTGATCGAATTTTTTTGTTTTATTTGACTTTAGGAGTCATTTTATTAAGGTTAAGTTTTATCCAATACAAATACTGTAGGCAAATTTTTGGGCTTATGTAATCTAATCCTGTCTTGTAGTTTAATTTCAATTAACTGGTATTTAGTATAGGAATGTTCTGCTTCAATTGTGTGTTGTTTTTAGCTTAGTATGGATTAATATTAAGACAAATTAGATCTTTTAAACAAATGCCCTTCAGGTATTTTTATGTTTTTGTTATTTGGGATACACTATATTTATAGGAAAATGAAGTTTTTCACCTGTAGCTGAATTGATTTTCTTTCTGAATATTGCCAAGAGGAGATAGTTTGCTTTTAGAATTATTGTTATAGCCCAACCTGCTTATGCACAGTATTGCCCGCTTTGTCCAATAGACCTTGCTGATTAATCCCTCGAGTAAGTCGAAAGATGCCTCAAGTGTGCTACCAAGTTACCTTATTATTTGTCATATACAGTTCAGGACTTTCCTGTCCCTTCCATGGTGTGAATCACCTAATATGTCTTCTACTTCAGAAGTTCACTAGCTTCAGAGTCTGCCAGTTCTTAACCTTTCACAGACATCATAATCACATTCAATTGGTGTTTTGCACTTGTTCATTCTTCTAAGATTTAGCCATGTCATGTATCAATTTTTTGATTATTTTCTTTGTTTTGGGCTAGTTAGTGCTTTTTTTTTTGTGTGTGAGAGAGTATTTTCTTCATGGTAAGTTTTATTTTTTATGTGGGCTGTTGAAAATTTCTGTGGGGAACAATGTGAAGTATTGTGTTTCAGATGAGGTGTTTATACTGCTATCCTTTGGTGAATTGCAGCTTCCAGATGATATAGAGTGGCATTTCATAGGGAATTTGCAGAGCAATAAAGTCAAGCCACTTTTAAGTATGTTCTCCTTCCTTCCTTCACTGTTCCTTCTCCCATCCTTTTCCTTATGGACCAATAAGGAGAAATGTACCTTTCTATGAAAATAGTTTCAGGATGAAGCGAAATCGTAAAAATCGTGATTACATGATAATTTTGTTGGAGAAACAAGGGGAGAAGACTTTTTTTTGGCGTCCTGGTGAAGTCCGTGGAGGGAAGGGTTGTTTCAAGAGTTGTAAACTTTATCTTGGTGAAAGAAACATACTTGCTTCATCAAATTTTGATTATATTAGGTACTGCAAATATTTTAAAAAATGCTAGATATGGTGAAACAGCTCGCCTTCACTTACATCAGTCAGATGATGGACAAAAAGATTCTATCTCCTCTCTGAGTTGGCATGCATGACATAACTTGAATGACGAATTTGAGCCACATTTTTGTGCAACGGGTATAAATGTATAGAGCTTATAATAAATTCTCGTCATCTTTGTTTTCAGCTGGAGTGCCAAATCTTGCTATGGTGGAGACAGTAGATGATGAAAAGGTAACTAACACAGACTCTGCTACTAATTTGTCTCCTAGTCCAGTAAATATCTTTAGAACATATTCTGGTTGTTGACTTGTTAATACAAACATCTTTTAACAATACAAAAAACATATGCCTAATAATGATTTCACTCTTAACTTTTGTTTCAATTCAAAAATCATTGTATTTATCTCGAATTTCTTGATCGGTTTTGGTCGAAGTATCCAAAATCGTTTGACCACATCTGGTACAAATCCCACACCTACATCCACGACGTGTCAACACAGGTGCGGCACCGAAAGTGAAGAGTCTGTGCAAGAAGGAAATAAAGCCGGTTTTAGTAAGAAAAAAAAAAGGGTTATTAAGTGAATTTAATAAGAAGCCTTTTTATTTTAATGCACATATTTAATTTATTCGGAGCTATTGGAGAGGGATAGACATTTGGGGAATATGAGTTGAAGCACTAACAAGAATATTTATACTATAATATTCAATATTGTGAGTAGTGTTTATTTTATTTTTGAGAATGGTTACCGTATATTTATTAGCATTAAGGAAATTTTGGCCACCATATTTACAGTTCAAAGAATTAGCAAAATCCTGTCCATCTTGCAAAGATTCTTATATTTTGTTTAATACTTTAATATATTTTGTAGATTGCAAATCAGCTTGACCGTGTGGCTGCGAACATTGGAAGAAAGCCATTGAAAGTTTTTATCCAAGTTAATACAAGCGGGGAAGAAAGTGGGTATCTGGAGTATGTCTCTGATTTATTAAGAGTCATTTGATCTATTTTTGTGAACACTACTATATTCATGAAGGAAAAGCTAATCATGATTTGATTCCATAATTGCAGCTAAATCTGGTGTTGAACCAGATGGGTGTCTGGAACTCGTGAAACATGTTACTTCAAACTGCCCTAATCTTGAATTCTGTGGCTTGATGACTATTGGAATGCCAGATTATACATCGACTCCTGAAAACTTTAAGGTTGAGGTTTTATCTTTGTTGTTTCTTCTTGGCCTGGTTGCTATTGTTATATCCTCAACTCAAATATGTTGCTATTTGTCATGCTTGGTTTCAGACTTTAGCAAAATGTAGAAGTGAAGTTTGCGAGGCACTTGGAATATCTGAAGATCAATGTGAGCTGTCAATGGGCATGTCAGGCGACTTTGAACTTGCTGTGAGTGACCTGACTTGTCACTAAGCACATCAAATCATTAGTAAGCTTGGAAGGAACTTGTATAACATGAGTTCTCTGGGGAGCATGTGGTAGTCTGAGTGCACCAATTATACAATCACTCTTTATAA</genome_strand>
        <mrna_strand>CGATTAAGTGCAGTGCTGGAGACGGAACCGTCAGATTCAGGAATGGCTGCTGCTTCCGCTACGGATGGTGTCGCTGCGACGGCAGTACGGTCGGTAATTCAGCGGATTGAACACGTGGCTGAACGATGTGGCCGCAGATCGGACCAAGTAAGGCTGGTGGCTGTAAGCAAAACTAAGCCAGTATCTCTCCTCAAACAAGTTTACGACGCCGGTCATCGTTGTTTCGGTGAAAATTACGTCAAAGAGCTCATTGAGAAAGCTCCTCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCCAGATGATATAGAGTGGCATTTCATAGGGAATTTGCAGAGCAATAAAGTCAAGCCACTTTTAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGAGTGCCAAATCTTGCTATGGTGGAGACAGTAGATGATGAAAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCAAATCAGCTTGACCGTGTGGCTGCGAACATTGGAAGAAAGCCATTGAAAGTTTTTATCCAAGTTAATACAAGCGGGGAAGAAAGTGGGTATCTGGA...................................................................................................CTAAATCTGGTGTTGAACCAGATGGGTGTCTGGAACTCGTGAAACATGTTACTTCAAACTGCCCTAATCTTGAATTCTGTGGCTTGATGACTATTGGAATGCCAGATTATACATCGACTCCTGAAAACTTTAAG..............................................................................................ACTTTAGCAAAATGTAGAAGTGAAGTTTGCGAGGCACTTGGAATATCTGAAGATCAATGTGAGCTGTCAATGGGCATGTCAGGCGACTTTGAACTTGCTGTGAGTGACCTGACTTGTCACTAACCACATCAAATCATTAGTAAGCTTGGAAGGAACTTGTATAACATGAACTCTCTGGGGAGCATGTGGTAGTCTGAGTGCACCAATTATAC-ATCACTCTTTATAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E612187" ref_strand="+" ref_description="SGN-E612187 [61947]">
      <seq>atcaagtgcagtgctggagacggaaccgtcagattcaggaatggctgctgcttccgccacggatggtgtcgctgcgacggcactacggtcggtaattcagcggattgaacacgcggctgaacgatgtggccgcagatcggaccaagtaaggctggtggctgtaagcaaaactaagccagtatctctcgtcaaacaagtttacgacgccggtcaccgttgcttcggtgaaaattacgtcaaagagctcatcgagaaagctcctcagcttccagatgatatagagtggcatttcatagggaatttgcagagcaataaagtgaagccacttttaactggagtgccaaatcttgctatggtggagactgtagatgatgaaaagattgcaaatcagcttgaccgtgtggctgggaacattggaagaaagccattgaaagtttttatccaagttaatacaagtggggaagaaactaaatctggtgttgaaccagatgggtgtctggaactcgtgaaacatgttacttcaaactgccctaatcttgaattctgtggcctgatgactatttggaatgccagattatacgtcggactcctgaggaactttaagactttagcaagatgtagaagtgaggtttggcgaggcacttgcgaatatctgaaggatcaatgtgatctgtcaattgggaatgtcaggcg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="+" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="25107" stop="28456"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="25407" g_stop="25671" g_length="265"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="265" r_length="265" r_score="0.970"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="25672" i_stop="26593" i_length="922">
            <donor d_prob="0.983" d_score="0.96"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="26594" g_stop="26660" g_length="67"/>
          <reference_exon_boundary r_type="cDNA" r_start="266" r_stop="332" r_length="67" r_score="0.985"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="26661" i_stop="27137" i_length="477">
            <donor d_prob="0.984" d_score="0.98"/>
            <acceptor a_prob="0.998" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="27138" g_stop="27184" g_length="47"/>
          <reference_exon_boundary r_type="cDNA" r_start="333" r_stop="379" r_length="47" r_score="0.979"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="27185" i_stop="27822" i_length="638">
            <donor d_prob="0.983" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="27823" g_stop="27910" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="380" r_stop="467" r_length="88" r_score="0.977"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="27911" i_stop="28022" i_length="112">
            <donor d_prob="0.190" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="28023" g_stop="28156" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="468" r_stop="604" r_length="137" r_score="0.933"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="28157" i_stop="28250" i_length="94">
            <donor d_prob="0.716" d_score="0.83"/>
            <acceptor a_prob="0.989" a_score="0.88"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="28251" g_stop="28332" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="605" r_stop="690" r_length="86" r_score="0.854"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="+" ref_id="SGN-E612187" ref_strand="+">
        <total_alignment_score>0.950</total_alignment_score>
        <cumulative_length_of_scored_exons>683</cumulative_length_of_scored_exons>
        <coverage percentage="0.986" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E612187" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="25407" e_stop="25671"/>
          <exon e_start="26594" e_stop="26660"/>
          <exon e_start="27138" e_stop="27184"/>
          <exon e_start="27823" e_stop="27910"/>
          <exon e_start="28023" e_stop="28156"/>
          <exon e_start="28251" e_stop="28332"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTAAGTGCAGTGCTGGAGACGGAACCGTCAGATTCAGGAATGGCTGCTGCTTCCGCTACGGATGGTGTCGCTGCGACGGCAGTACGGTCGGTAATTCAGCGGATTGAACACGTGGCTGAACGATGTGGCCGCAGATCGGACCAAGTAAGGCTGGTGGCTGTAAGCAAAACTAAGCCAGTATCTCTCCTCAAACAAGTTTACGACGCCGGTCATCGTTGTTTCGGTGAAAATTACGTCAAAGAGCTCATTGAGAAAGCTCCTCAGGTAAAGGTTCTATACTCGTGTGTGATGGCCACTACATAATCTAAGCATAGAAAACATATGATTGATTGGTTTGCTGATCGAATTTTTTTGTTTTATTTGACTTTAGGAGTCATTTTATTAAGGTTAAGTTTTATCCAATACAAATACTGTAGGCAAATTTTTGGGCTTATGTAATCTAATCCTGTCTTGTAGTTTAATTTCAATTAACTGGTATTTAGTATAGGAATGTTCTGCTTCAATTGTGTGTTGTTTTTAGCTTAGTATGGATTAATATTAAGACAAATTAGATCTTTTAAACAAATGCCCTTCAGGTATTTTTATGTTTTTGTTATTTGGGATACACTATATTTATAGGAAAATGAAGTTTTTCACCTGTAGCTGAATTGATTTTCTTTCTGAATATTGCCAAGAGGAGATAGTTTGCTTTTAGAATTATTGTTATAGCCCAACCTGCTTATGCACAGTATTGCCCGCTTTGTCCAATAGACCTTGCTGATTAATCCCTCGAGTAAGTCGAAAGATGCCTCAAGTGTGCTACCAAGTTACCTTATTATTTGTCATATACAGTTCAGGACTTTCCTGTCCCTTCCATGGTGTGAATCACCTAATATGTCTTCTACTTCAGAAGTTCACTAGCTTCAGAGTCTGCCAGTTCTTAACCTTTCACAGACATCATAATCACATTCAATTGGTGTTTTGCACTTGTTCATTCTTCTAAGATTTAGCCATGTCATGTATCAATTTTTTGATTATTTTCTTTGTTTTGGGCTAGTTAGTGCTTTTTTTTTTGTGTGTGAGAGAGTATTTTCTTCATGGTAAGTTTTATTTTTTATGTGGGCTGTTGAAAATTTCTGTGGGGAACAATGTGAAGTATTGTGTTTCAGATGAGGTGTTTATACTGCTATCCTTTGGTGAATTGCAGCTTCCAGATGATATAGAGTGGCATTTCATAGGGAATTTGCAGAGCAATAAAGTCAAGCCACTTTTAAGTATGTTCTCCTTCCTTCCTTCACTGTTCCTTCTCCCATCCTTTTCCTTATGGACCAATAAGGAGAAATGTACCTTTCTATGAAAATAGTTTCAGGATGAAGCGAAATCGTAAAAATCGTGATTACATGATAATTTTGTTGGAGAAACAAGGGGAGAAGACTTTTTTTTGGCGTCCTGGTGAAGTCCGTGGAGGGAAGGGTTGTTTCAAGAGTTGTAAACTTTATCTTGGTGAAAGAAACATACTTGCTTCATCAAATTTTGATTATATTAGGTACTGCAAATATTTTAAAAAATGCTAGATATGGTGAAACAGCTCGCCTTCACTTACATCAGTCAGATGATGGACAAAAAGATTCTATCTCCTCTCTGAGTTGGCATGCATGACATAACTTGAATGACGAATTTGAGCCACATTTTTGTGCAACGGGTATAAATGTATAGAGCTTATAATAAATTCTCGTCATCTTTGTTTTCAGCTGGAGTGCCAAATCTTGCTATGGTGGAGACAGTAGATGATGAAAAGGTAACTAACACAGACTCTGCTACTAATTTGTCTCCTAGTCCAGTAAATATCTTTAGAACATATTCTGGTTGTTGACTTGTTAATACAAACATCTTTTAACAATACAAAAAACATATGCCTAATAATGATTTCACTCTTAACTTTTGTTTCAATTCAAAAATCATTGTATTTATCTCGAATTTCTTGATCGGTTTTGGTCGAAGTATCCAAAATCGTTTGACCACATCTGGTACAAATCCCACACCTACATCCACGACGTGTCAACACAGGTGCGGCACCGAAAGTGAAGAGTCTGTGCAAGAAGGAAATAAAGCCGGTTTTAGTAAGAAAAAAAAAAGGGTTATTAAGTGAATTTAATAAGAAGCCTTTTTATTTTAATGCACATATTTAATTTATTCGGAGCTATTGGAGAGGGATAGACATTTGGGGAATATGAGTTGAAGCACTAACAAGAATATTTATACTATAATATTCAATATTGTGAGTAGTGTTTATTTTATTTTTGAGAATGGTTACCGTATATTTATTAGCATTAAGGAAATTTTGGCCACCATATTTACAGTTCAAAGAATTAGCAAAATCCTGTCCATCTTGCAAAGATTCTTATATTTTGTTTAATACTTTAATATATTTTGTAGATTGCAAATCAGCTTGACCGTGTGGCTGCGAACATTGGAAGAAAGCCATTGAAAGTTTTTATCCAAGTTAATACAAGCGGGGAAGAAAGTGGGTATCTGGAGTATGTCTCTGATTTATTAAGAGTCATTTGATCTATTTTTGTGAACACTACTATATTCATGAAGGAAAAGCTAATCATGATTTGATTCCATAATTGCAGCTAAATCTGGTGTTGAACCAGATGGGTGTCTGGAACTCGTGAAACATGTTACTTCAAACTGCCCTAATCTTGAATTCTGTGGCTTGATGACTA-TTGGAATGCCAGATTATACATC-GACTCCTGA-AAACTTTAAGGTTGAGGTTTTATCTTTGTTGTTTCTTCTTGGCCTGGTTGCTATTGTTATATCCTCAACTCAAATATGTTGCTATTTGTCATGCTTGGTTTCAGACTTTAGCAAAATGTAGAAGTGAAGTTT-GCGAGGCACTTG-GAATATCTGAA-GATCAATGTGAGCTGTCAA-TGGGCATGTCAG</genome_strand>
        <mrna_strand>ATCAAGTGCAGTGCTGGAGACGGAACCGTCAGATTCAGGAATGGCTGCTGCTTCCGCCACGGATGGTGTCGCTGCGACGGCACTACGGTCGGTAATTCAGCGGATTGAACACGCGGCTGAACGATGTGGCCGCAGATCGGACCAAGTAAGGCTGGTGGCTGTAAGCAAAACTAAGCCAGTATCTCTCGTCAAACAAGTTTACGACGCCGGTCACCGTTGCTTCGGTGAAAATTACGTCAAAGAGCTCATCGAGAAAGCTCCTCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCCAGATGATATAGAGTGGCATTTCATAGGGAATTTGCAGAGCAATAAAGTGAAGCCACTTTTAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGAGTGCCAAATCTTGCTATGGTGGAGACTGTAGATGATGAAAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCAAATCAGCTTGACCGTGTGGCTGGGAACATTGGAAGAAAGCCATTGAAAGTTTTTATCCAAGTTAATACAAGTGGGGAAGAAA................................................................................................................CTAAATCTGGTGTTGAACCAGATGGGTGTCTGGAACTCGTGAAACATGTTACTTCAAACTGCCCTAATCTTGAATTCTGTGGCCTGATGACTATTTGGAATGCCAGATTATACGTCGGACTCCTGAGGAACTTTAAG..............................................................................................ACTTTAGCAAGATGTAGAAGTGAGGTTTGGCGAGGCACTTGCGAATATCTGAAGGATCAATGTGATCTGTCAATTGGGAATGTCAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E727218" ref_strand="+" ref_description="SGN-E727218 [LA14AC10]">
      <seq>ggagacggaaccgtcatattcaggaatggctgctgcttccgctacggatggtgtcgctgcgacggcagtacggtcggtaattcagcggattgaacacgtggctgaacgatgtggccgcagatcggaccaagtaaggctggtggctgtaagcaaaactaagccagtatctctcctcaaacaagtttacgacgccggtcatcgttgtttcggtgaaaattacgtcaaagagctcattgagaaagctcctcagcttccagatgatatagagtggcatttcatagggaatttgcagagcaataaagtcaagccacttttaactggagtgccaaatcttgctatggtggagacagtagatgatgaaaagattgcaaatcagcttgaccgtgtggctgcgaacattggaagaaagccattgaaagtttttatccaagttaatacaagcggggaagaaactaaatctggtgttgaaccagatgggtgtctggaactcgtgaaacatgttacttcaaactgccctaatcttgaattctgtggcttgatgactattggaatgccagattatacatcgactcctgaaaactttaagactttagcaaaatgtagaagtgaagtttgcgaggcacttggaatatctgaagatcaatgtgagctgtcaatgggcatgtcaggcgactttgaacttgctgttgagatgggcagtacaaatgttcgagttggatctactatatttggtgcaagggaatatccaacgaagtagtcatcgaactaggttgatgaacccagtttagtgaagagagcttgagccaaacatgtaccttaagattttgcagcttcatgtcggaatatgagtgtttgtacgatgccactatggacctcattggc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="+" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="25122" stop="29817"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="25422" g_stop="25671" g_length="250"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="250" r_length="250" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="25672" i_stop="26593" i_length="922">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="26594" g_stop="26660" g_length="67"/>
          <reference_exon_boundary r_type="cDNA" r_start="251" r_stop="317" r_length="67" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="26661" i_stop="27137" i_length="477">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="27138" g_stop="27184" g_length="47"/>
          <reference_exon_boundary r_type="cDNA" r_start="318" r_stop="364" r_length="47" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="27185" i_stop="27822" i_length="638">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="27823" g_stop="27910" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="365" r_stop="452" r_length="88" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="27911" i_stop="28022" i_length="112">
            <donor d_prob="0.190" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="28023" g_stop="28156" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="453" r_stop="586" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="28157" i_stop="28250" i_length="94">
            <donor d_prob="0.716" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="28251" g_stop="28349" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="587" r_stop="685" r_length="99" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="28350" i_stop="29320" i_length="971">
            <donor d_prob="0.587" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="29321" g_stop="29517" g_length="197"/>
          <reference_exon_boundary r_type="cDNA" r_start="686" r_stop="882" r_length="197" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="+" ref_id="SGN-E727218" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>882</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E727218" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="25422" e_stop="25671"/>
          <exon e_start="26594" e_stop="26660"/>
          <exon e_start="27138" e_stop="27184"/>
          <exon e_start="27823" e_stop="27910"/>
          <exon e_start="28023" e_stop="28156"/>
          <exon e_start="28251" e_stop="28349"/>
          <exon e_start="29321" e_stop="29517"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAGACGGAACCGTCAGATTCAGGAATGGCTGCTGCTTCCGCTACGGATGGTGTCGCTGCGACGGCAGTACGGTCGGTAATTCAGCGGATTGAACACGTGGCTGAACGATGTGGCCGCAGATCGGACCAAGTAAGGCTGGTGGCTGTAAGCAAAACTAAGCCAGTATCTCTCCTCAAACAAGTTTACGACGCCGGTCATCGTTGTTTCGGTGAAAATTACGTCAAAGAGCTCATTGAGAAAGCTCCTCAGGTAAAGGTTCTATACTCGTGTGTGATGGCCACTACATAATCTAAGCATAGAAAACATATGATTGATTGGTTTGCTGATCGAATTTTTTTGTTTTATTTGACTTTAGGAGTCATTTTATTAAGGTTAAGTTTTATCCAATACAAATACTGTAGGCAAATTTTTGGGCTTATGTAATCTAATCCTGTCTTGTAGTTTAATTTCAATTAACTGGTATTTAGTATAGGAATGTTCTGCTTCAATTGTGTGTTGTTTTTAGCTTAGTATGGATTAATATTAAGACAAATTAGATCTTTTAAACAAATGCCCTTCAGGTATTTTTATGTTTTTGTTATTTGGGATACACTATATTTATAGGAAAATGAAGTTTTTCACCTGTAGCTGAATTGATTTTCTTTCTGAATATTGCCAAGAGGAGATAGTTTGCTTTTAGAATTATTGTTATAGCCCAACCTGCTTATGCACAGTATTGCCCGCTTTGTCCAATAGACCTTGCTGATTAATCCCTCGAGTAAGTCGAAAGATGCCTCAAGTGTGCTACCAAGTTACCTTATTATTTGTCATATACAGTTCAGGACTTTCCTGTCCCTTCCATGGTGTGAATCACCTAATATGTCTTCTACTTCAGAAGTTCACTAGCTTCAGAGTCTGCCAGTTCTTAACCTTTCACAGACATCATAATCACATTCAATTGGTGTTTTGCACTTGTTCATTCTTCTAAGATTTAGCCATGTCATGTATCAATTTTTTGATTATTTTCTTTGTTTTGGGCTAGTTAGTGCTTTTTTTTTTGTGTGTGAGAGAGTATTTTCTTCATGGTAAGTTTTATTTTTTATGTGGGCTGTTGAAAATTTCTGTGGGGAACAATGTGAAGTATTGTGTTTCAGATGAGGTGTTTATACTGCTATCCTTTGGTGAATTGCAGCTTCCAGATGATATAGAGTGGCATTTCATAGGGAATTTGCAGAGCAATAAAGTCAAGCCACTTTTAAGTATGTTCTCCTTCCTTCCTTCACTGTTCCTTCTCCCATCCTTTTCCTTATGGACCAATAAGGAGAAATGTACCTTTCTATGAAAATAGTTTCAGGATGAAGCGAAATCGTAAAAATCGTGATTACATGATAATTTTGTTGGAGAAACAAGGGGAGAAGACTTTTTTTTGGCGTCCTGGTGAAGTCCGTGGAGGGAAGGGTTGTTTCAAGAGTTGTAAACTTTATCTTGGTGAAAGAAACATACTTGCTTCATCAAATTTTGATTATATTAGGTACTGCAAATATTTTAAAAAATGCTAGATATGGTGAAACAGCTCGCCTTCACTTACATCAGTCAGATGATGGACAAAAAGATTCTATCTCCTCTCTGAGTTGGCATGCATGACATAACTTGAATGACGAATTTGAGCCACATTTTTGTGCAACGGGTATAAATGTATAGAGCTTATAATAAATTCTCGTCATCTTTGTTTTCAGCTGGAGTGCCAAATCTTGCTATGGTGGAGACAGTAGATGATGAAAAGGTAACTAACACAGACTCTGCTACTAATTTGTCTCCTAGTCCAGTAAATATCTTTAGAACATATTCTGGTTGTTGACTTGTTAATACAAACATCTTTTAACAATACAAAAAACATATGCCTAATAATGATTTCACTCTTAACTTTTGTTTCAATTCAAAAATCATTGTATTTATCTCGAATTTCTTGATCGGTTTTGGTCGAAGTATCCAAAATCGTTTGACCACATCTGGTACAAATCCCACACCTACATCCACGACGTGTCAACACAGGTGCGGCACCGAAAGTGAAGAGTCTGTGCAAGAAGGAAATAAAGCCGGTTTTAGTAAGAAAAAAAAAAGGGTTATTAAGTGAATTTAATAAGAAGCCTTTTTATTTTAATGCACATATTTAATTTATTCGGAGCTATTGGAGAGGGATAGACATTTGGGGAATATGAGTTGAAGCACTAACAAGAATATTTATACTATAATATTCAATATTGTGAGTAGTGTTTATTTTATTTTTGAGAATGGTTACCGTATATTTATTAGCATTAAGGAAATTTTGGCCACCATATTTACAGTTCAAAGAATTAGCAAAATCCTGTCCATCTTGCAAAGATTCTTATATTTTGTTTAATACTTTAATATATTTTGTAGATTGCAAATCAGCTTGACCGTGTGGCTGCGAACATTGGAAGAAAGCCATTGAAAGTTTTTATCCAAGTTAATACAAGCGGGGAAGAAAGTGGGTATCTGGAGTATGTCTCTGATTTATTAAGAGTCATTTGATCTATTTTTGTGAACACTACTATATTCATGAAGGAAAAGCTAATCATGATTTGATTCCATAATTGCAGCTAAATCTGGTGTTGAACCAGATGGGTGTCTGGAACTCGTGAAACATGTTACTTCAAACTGCCCTAATCTTGAATTCTGTGGCTTGATGACTATTGGAATGCCAGATTATACATCGACTCCTGAAAACTTTAAGGTTGAGGTTTTATCTTTGTTGTTTCTTCTTGGCCTGGTTGCTATTGTTATATCCTCAACTCAAATATGTTGCTATTTGTCATGCTTGGTTTCAGACTTTAGCAAAATGTAGAAGTGAAGTTTGCGAGGCACTTGGAATATCTGAAGATCAATGTGAGCTGTCAATGGGCATGTCAGGCGACTTTGAACTTGCTGTGAGTGACCTGACTTGTCACTAAGCACATCAAATCATTAGTAAGCTTGGAAGGAACTTGTATAACATGAGTTCTCTGGGGAGCATGTGGTAGTCTGAGTGCACCAATTATACAATCACTCTTTATAAATTAAACCAAAGTATTAACTAGACATCTGACTCAGTTTTCATTACTGGTCTCTGTTGTTAGAATCTTCTTGAGTCTGATGTATAATGCTTTATCGCTGGACAATAAACTCGCCCAGCTCCCCGCCACACCCATGGGATTAAGACGCTCAGACTAGGATTGTAGTTTCACCCCTTAACAGCTTGTTACAATTCAAGGGTTAGTCTGTTTTTATCTTTTGATAAGGTAAAAGTCATGTGACCCGGTTTGAACATTGGAACCAACTAGTGATGCTTATGTTAGTTAGGGTAAGCTGCCCGCCTATATCATACTTCTTGGGGGTGTGGATCTTCCTGGACCCTGTGTGAATGCCGGCTGCCCTTCATATTTGCGCTATTCTCTATCAGTTTCCCATGTGTACTTGTTTTCTGTGGCTGATATTATATATCTGTAGGGTGGATTGTTGTTAAAAGTAGAATTTCGTTTGACGCTCTCAAAAAAGAAAAGAAAAATTTAGTATCACAAGTAGAATTTTATTTGATTAGTTGTTGATTCTTTTGGGAGATCTTATCAGTGATGCGCTGTTCCAACCTCCATCCTACCTCCAATCTGATGACTAGTACTGCAGTCACCCATCAACCTATGCTTGTAGCCTATGGCCCCCTTAATTATGTAAGATATTTTCTTTTAAGGAGTAGTCTAGGCTATTGTATCAGGTAAGCATATTTTATCCTTGTGTCCTGCTATATTCAATAAAAGAAACAAGCACACATTCGTGCTTGCTAGCCAGCATTGGTATTGAATTCTACATATGCTTCGTTTGACCTCATGTTCTGCTATACTTATAATGCTGTCTATTACTACAGGTTGAGATGGGCAGTACAAATGTTCGAGTTGGATCTACTATATTTGGTGCAAGGGAATATCCAACGAAGTAGTCATCGAACTAGGTTGATGAACCCAGTTTAGTGAAGAGAGCTTGAGCCAAACATGTACCTTAAGATTTTGCAGCTTCATGTCGGAATATGAGTGTTTGTACGATGCCACTATGGACCTCATTGGC</genome_strand>
        <mrna_strand>GGAGACGGAACCGTCATATTCAGGAATGGCTGCTGCTTCCGCTACGGATGGTGTCGCTGCGACGGCAGTACGGTCGGTAATTCAGCGGATTGAACACGTGGCTGAACGATGTGGCCGCAGATCGGACCAAGTAAGGCTGGTGGCTGTAAGCAAAACTAAGCCAGTATCTCTCCTCAAACAAGTTTACGACGCCGGTCATCGTTGTTTCGGTGAAAATTACGTCAAAGAGCTCATTGAGAAAGCTCCTCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCCAGATGATATAGAGTGGCATTTCATAGGGAATTTGCAGAGCAATAAAGTCAAGCCACTTTTAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGAGTGCCAAATCTTGCTATGGTGGAGACAGTAGATGATGAAAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCAAATCAGCTTGACCGTGTGGCTGCGAACATTGGAAGAAAGCCATTGAAAGTTTTTATCCAAGTTAATACAAGCGGGGAAGAAA................................................................................................................CTAAATCTGGTGTTGAACCAGATGGGTGTCTGGAACTCGTGAAACATGTTACTTCAAACTGCCCTAATCTTGAATTCTGTGGCTTGATGACTATTGGAATGCCAGATTATACATCGACTCCTGAAAACTTTAAG..............................................................................................ACTTTAGCAAAATGTAGAAGTGAAGTTTGCGAGGCACTTGGAATATCTGAAGATCAATGTGAGCTGTCAATGGGCATGTCAGGCGACTTTGAACTTGCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGAGATGGGCAGTACAAATGTTCGAGTTGGATCTACTATATTTGGTGCAAGGGAATATCCAACGAAGTAGTCATCGAACTAGGTTGATGAACCCAGTTTAGTGAAGAGAGCTTGAGCCAAACATGTACCTTAAGATTTTGCAGCTTCATGTCGGAATATGAGTGTTTGTACGATGCCACTATGGACCTCATTGGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E731772" ref_strand="+" ref_description="SGN-E731772 [LA28AF03]">
      <seq>gacggaaccgtcagattcaggaatggctgctgcttccgctacggatggtgtcgctgcgacggcagtacggtcggtaattcagcggattgaacacgtggctgaacgatgtggccgcagatcggaccaagtaaggctggtggctgtaagcaaaactaagccagtatctctcctcaaacaagtttacgacgccggtcatcgttgtttcggtgaaaattacgtcaaagagctcattgagaaagctcctcagcttccagatgatatagagtggcatttcatagggaatttgcagagcaataaagtcaagccacttttaactggagtgccaaatcttgctatggtggagacagtagatgatgaaaagattgcaaatcagcttgaccgtgtggctgcgaacattggaagaaagccattgaaagtttttatccaagttaatacaagcggggaagaaactaaatctggtgttgaaccagatgggtgtctggaactcgtgaaacatgttacttcaaactgccctaatcttgaattctgtggcttgatgactattggaatgccagattatacatcgactcctgaaaactttaagactttagcaaaatgtagaagtgaagtttgcgaggcacttggaatatctgaagatcaatgtgagctgtcaatgggcatgtcaggcgactttgaacttgctgttgagatgggcagtacaaatgttcgagttggatctactatatttggtgcaagggaatatccaacgaagtagtcatcgaactangttgatgaacccagtttagtgaagagagcttgagcccaacatgtaccttaagattttgcagcttcatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="+" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="25125" stop="29772"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="25425" g_stop="25671" g_length="247"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="247" r_length="247" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="25672" i_stop="26593" i_length="922">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="26594" g_stop="26660" g_length="67"/>
          <reference_exon_boundary r_type="cDNA" r_start="248" r_stop="314" r_length="67" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="26661" i_stop="27137" i_length="477">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="27138" g_stop="27184" g_length="47"/>
          <reference_exon_boundary r_type="cDNA" r_start="315" r_stop="361" r_length="47" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="27185" i_stop="27822" i_length="638">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="27823" g_stop="27910" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="362" r_stop="449" r_length="88" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="27911" i_stop="28022" i_length="112">
            <donor d_prob="0.190" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="28023" g_stop="28156" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="450" r_stop="583" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="28157" i_stop="28250" i_length="94">
            <donor d_prob="0.716" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="28251" g_stop="28349" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="584" r_stop="682" r_length="99" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="28350" i_stop="29320" i_length="971">
            <donor d_prob="0.587" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="29321" g_stop="29472" g_length="152"/>
          <reference_exon_boundary r_type="cDNA" r_start="683" r_stop="834" r_length="152" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="+" ref_id="SGN-E731772" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>834</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E731772" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="25425" e_stop="25671"/>
          <exon e_start="26594" e_stop="26660"/>
          <exon e_start="27138" e_stop="27184"/>
          <exon e_start="27823" e_stop="27910"/>
          <exon e_start="28023" e_stop="28156"/>
          <exon e_start="28251" e_stop="28349"/>
          <exon e_start="29321" e_stop="29472"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GACGGAACCGTCAGATTCAGGAATGGCTGCTGCTTCCGCTACGGATGGTGTCGCTGCGACGGCAGTACGGTCGGTAATTCAGCGGATTGAACACGTGGCTGAACGATGTGGCCGCAGATCGGACCAAGTAAGGCTGGTGGCTGTAAGCAAAACTAAGCCAGTATCTCTCCTCAAACAAGTTTACGACGCCGGTCATCGTTGTTTCGGTGAAAATTACGTCAAAGAGCTCATTGAGAAAGCTCCTCAGGTAAAGGTTCTATACTCGTGTGTGATGGCCACTACATAATCTAAGCATAGAAAACATATGATTGATTGGTTTGCTGATCGAATTTTTTTGTTTTATTTGACTTTAGGAGTCATTTTATTAAGGTTAAGTTTTATCCAATACAAATACTGTAGGCAAATTTTTGGGCTTATGTAATCTAATCCTGTCTTGTAGTTTAATTTCAATTAACTGGTATTTAGTATAGGAATGTTCTGCTTCAATTGTGTGTTGTTTTTAGCTTAGTATGGATTAATATTAAGACAAATTAGATCTTTTAAACAAATGCCCTTCAGGTATTTTTATGTTTTTGTTATTTGGGATACACTATATTTATAGGAAAATGAAGTTTTTCACCTGTAGCTGAATTGATTTTCTTTCTGAATATTGCCAAGAGGAGATAGTTTGCTTTTAGAATTATTGTTATAGCCCAACCTGCTTATGCACAGTATTGCCCGCTTTGTCCAATAGACCTTGCTGATTAATCCCTCGAGTAAGTCGAAAGATGCCTCAAGTGTGCTACCAAGTTACCTTATTATTTGTCATATACAGTTCAGGACTTTCCTGTCCCTTCCATGGTGTGAATCACCTAATATGTCTTCTACTTCAGAAGTTCACTAGCTTCAGAGTCTGCCAGTTCTTAACCTTTCACAGACATCATAATCACATTCAATTGGTGTTTTGCACTTGTTCATTCTTCTAAGATTTAGCCATGTCATGTATCAATTTTTTGATTATTTTCTTTGTTTTGGGCTAGTTAGTGCTTTTTTTTTTGTGTGTGAGAGAGTATTTTCTTCATGGTAAGTTTTATTTTTTATGTGGGCTGTTGAAAATTTCTGTGGGGAACAATGTGAAGTATTGTGTTTCAGATGAGGTGTTTATACTGCTATCCTTTGGTGAATTGCAGCTTCCAGATGATATAGAGTGGCATTTCATAGGGAATTTGCAGAGCAATAAAGTCAAGCCACTTTTAAGTATGTTCTCCTTCCTTCCTTCACTGTTCCTTCTCCCATCCTTTTCCTTATGGACCAATAAGGAGAAATGTACCTTTCTATGAAAATAGTTTCAGGATGAAGCGAAATCGTAAAAATCGTGATTACATGATAATTTTGTTGGAGAAACAAGGGGAGAAGACTTTTTTTTGGCGTCCTGGTGAAGTCCGTGGAGGGAAGGGTTGTTTCAAGAGTTGTAAACTTTATCTTGGTGAAAGAAACATACTTGCTTCATCAAATTTTGATTATATTAGGTACTGCAAATATTTTAAAAAATGCTAGATATGGTGAAACAGCTCGCCTTCACTTACATCAGTCAGATGATGGACAAAAAGATTCTATCTCCTCTCTGAGTTGGCATGCATGACATAACTTGAATGACGAATTTGAGCCACATTTTTGTGCAACGGGTATAAATGTATAGAGCTTATAATAAATTCTCGTCATCTTTGTTTTCAGCTGGAGTGCCAAATCTTGCTATGGTGGAGACAGTAGATGATGAAAAGGTAACTAACACAGACTCTGCTACTAATTTGTCTCCTAGTCCAGTAAATATCTTTAGAACATATTCTGGTTGTTGACTTGTTAATACAAACATCTTTTAACAATACAAAAAACATATGCCTAATAATGATTTCACTCTTAACTTTTGTTTCAATTCAAAAATCATTGTATTTATCTCGAATTTCTTGATCGGTTTTGGTCGAAGTATCCAAAATCGTTTGACCACATCTGGTACAAATCCCACACCTACATCCACGACGTGTCAACACAGGTGCGGCACCGAAAGTGAAGAGTCTGTGCAAGAAGGAAATAAAGCCGGTTTTAGTAAGAAAAAAAAAAGGGTTATTAAGTGAATTTAATAAGAAGCCTTTTTATTTTAATGCACATATTTAATTTATTCGGAGCTATTGGAGAGGGATAGACATTTGGGGAATATGAGTTGAAGCACTAACAAGAATATTTATACTATAATATTCAATATTGTGAGTAGTGTTTATTTTATTTTTGAGAATGGTTACCGTATATTTATTAGCATTAAGGAAATTTTGGCCACCATATTTACAGTTCAAAGAATTAGCAAAATCCTGTCCATCTTGCAAAGATTCTTATATTTTGTTTAATACTTTAATATATTTTGTAGATTGCAAATCAGCTTGACCGTGTGGCTGCGAACATTGGAAGAAAGCCATTGAAAGTTTTTATCCAAGTTAATACAAGCGGGGAAGAAAGTGGGTATCTGGAGTATGTCTCTGATTTATTAAGAGTCATTTGATCTATTTTTGTGAACACTACTATATTCATGAAGGAAAAGCTAATCATGATTTGATTCCATAATTGCAGCTAAATCTGGTGTTGAACCAGATGGGTGTCTGGAACTCGTGAAACATGTTACTTCAAACTGCCCTAATCTTGAATTCTGTGGCTTGATGACTATTGGAATGCCAGATTATACATCGACTCCTGAAAACTTTAAGGTTGAGGTTTTATCTTTGTTGTTTCTTCTTGGCCTGGTTGCTATTGTTATATCCTCAACTCAAATATGTTGCTATTTGTCATGCTTGGTTTCAGACTTTAGCAAAATGTAGAAGTGAAGTTTGCGAGGCACTTGGAATATCTGAAGATCAATGTGAGCTGTCAATGGGCATGTCAGGCGACTTTGAACTTGCTGTGAGTGACCTGACTTGTCACTAAGCACATCAAATCATTAGTAAGCTTGGAAGGAACTTGTATAACATGAGTTCTCTGGGGAGCATGTGGTAGTCTGAGTGCACCAATTATACAATCACTCTTTATAAATTAAACCAAAGTATTAACTAGACATCTGACTCAGTTTTCATTACTGGTCTCTGTTGTTAGAATCTTCTTGAGTCTGATGTATAATGCTTTATCGCTGGACAATAAACTCGCCCAGCTCCCCGCCACACCCATGGGATTAAGACGCTCAGACTAGGATTGTAGTTTCACCCCTTAACAGCTTGTTACAATTCAAGGGTTAGTCTGTTTTTATCTTTTGATAAGGTAAAAGTCATGTGACCCGGTTTGAACATTGGAACCAACTAGTGATGCTTATGTTAGTTAGGGTAAGCTGCCCGCCTATATCATACTTCTTGGGGGTGTGGATCTTCCTGGACCCTGTGTGAATGCCGGCTGCCCTTCATATTTGCGCTATTCTCTATCAGTTTCCCATGTGTACTTGTTTTCTGTGGCTGATATTATATATCTGTAGGGTGGATTGTTGTTAAAAGTAGAATTTCGTTTGACGCTCTCAAAAAAGAAAAGAAAAATTTAGTATCACAAGTAGAATTTTATTTGATTAGTTGTTGATTCTTTTGGGAGATCTTATCAGTGATGCGCTGTTCCAACCTCCATCCTACCTCCAATCTGATGACTAGTACTGCAGTCACCCATCAACCTATGCTTGTAGCCTATGGCCCCCTTAATTATGTAAGATATTTTCTTTTAAGGAGTAGTCTAGGCTATTGTATCAGGTAAGCATATTTTATCCTTGTGTCCTGCTATATTCAATAAAAGAAACAAGCACACATTCGTGCTTGCTAGCCAGCATTGGTATTGAATTCTACATATGCTTCGTTTGACCTCATGTTCTGCTATACTTATAATGCTGTCTATTACTACAGGTTGAGATGGGCAGTACAAATGTTCGAGTTGGATCTACTATATTTGGTGCAAGGGAATATCCAACGAAGTAGTCATCGAACTAGGTTGATGAACCCAGTTTAGTGAAGAGAGCTTGAGCCAAACATGTACCTTAAGATTTTGCAGCTTCATG</genome_strand>
        <mrna_strand>GACGGAACCGTCAGATTCAGGAATGGCTGCTGCTTCCGCTACGGATGGTGTCGCTGCGACGGCAGTACGGTCGGTAATTCAGCGGATTGAACACGTGGCTGAACGATGTGGCCGCAGATCGGACCAAGTAAGGCTGGTGGCTGTAAGCAAAACTAAGCCAGTATCTCTCCTCAAACAAGTTTACGACGCCGGTCATCGTTGTTTCGGTGAAAATTACGTCAAAGAGCTCATTGAGAAAGCTCCTCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCCAGATGATATAGAGTGGCATTTCATAGGGAATTTGCAGAGCAATAAAGTCAAGCCACTTTTAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGAGTGCCAAATCTTGCTATGGTGGAGACAGTAGATGATGAAAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCAAATCAGCTTGACCGTGTGGCTGCGAACATTGGAAGAAAGCCATTGAAAGTTTTTATCCAAGTTAATACAAGCGGGGAAGAAA................................................................................................................CTAAATCTGGTGTTGAACCAGATGGGTGTCTGGAACTCGTGAAACATGTTACTTCAAACTGCCCTAATCTTGAATTCTGTGGCTTGATGACTATTGGAATGCCAGATTATACATCGACTCCTGAAAACTTTAAG..............................................................................................ACTTTAGCAAAATGTAGAAGTGAAGTTTGCGAGGCACTTGGAATATCTGAAGATCAATGTGAGCTGTCAATGGGCATGTCAGGCGACTTTGAACTTGCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGAGATGGGCAGTACAAATGTTCGAGTTGGATCTACTATATTTGGTGCAAGGGAATATCCAACGAAGTAGTCATCGAACTANGTTGATGAACCCAGTTTAGTGAAGAGAGCTTGAGCCCAACATGTACCTTAAGATTTTGCAGCTTCATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E358203" ref_strand="+" ref_description="SGN-E358203 [cLHT-23-L19]">
      <seq>acggaaccgtcagattcaggaatggctgctgcttccgccacggatggtgtcgctgcgacggcactacggtcggtaattcagcggattgaacacgtggctgaacgatgtggccgcagatcggaccaagtaaggctggtggctgtaagtaaaactaagccagtatctctcctcaaacaagtttatgacgccggtcatcgttgtttcggtgaaaattacgtcaaagagctcattgagaaagctcctcagcttccagatgatatagagtggcatttcatagggaatttgcagagcaataaagtcaagccacttttaactggagtgccaaatcttgctatggtggagacagtagatgatgaaaagattgcaaatcagcttgaccgtgtggctgcgaacattggaagaaagccattgaaagtttttatccaagttaatacaagtggggaagaaactaaatctggtgttgaaccagatgggtgtctggaactcgtgaaacatgttacttcaaactgccctaatcttgaattctgtggcttgatgacta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="+" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="25126" stop="28415"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="25426" g_stop="25671" g_length="246"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="246" r_length="246" r_score="0.984"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="25672" i_stop="26593" i_length="922">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="26594" g_stop="26660" g_length="67"/>
          <reference_exon_boundary r_type="cDNA" r_start="247" r_stop="313" r_length="67" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="26661" i_stop="27137" i_length="477">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="27138" g_stop="27184" g_length="47"/>
          <reference_exon_boundary r_type="cDNA" r_start="314" r_stop="360" r_length="47" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="27185" i_stop="27822" i_length="638">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="27823" g_stop="27910" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="361" r_stop="448" r_length="88" r_score="0.989"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="27911" i_stop="28022" i_length="112">
            <donor d_prob="0.190" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="28023" g_stop="28115" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="449" r_stop="541" r_length="93" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="+" ref_id="SGN-E358203" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>541</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E358203" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="25426" e_stop="25671"/>
          <exon e_start="26594" e_stop="26660"/>
          <exon e_start="27138" e_stop="27184"/>
          <exon e_start="27823" e_stop="27910"/>
          <exon e_start="28023" e_stop="28115"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACGGAACCGTCAGATTCAGGAATGGCTGCTGCTTCCGCTACGGATGGTGTCGCTGCGACGGCAGTACGGTCGGTAATTCAGCGGATTGAACACGTGGCTGAACGATGTGGCCGCAGATCGGACCAAGTAAGGCTGGTGGCTGTAAGCAAAACTAAGCCAGTATCTCTCCTCAAACAAGTTTACGACGCCGGTCATCGTTGTTTCGGTGAAAATTACGTCAAAGAGCTCATTGAGAAAGCTCCTCAGGTAAAGGTTCTATACTCGTGTGTGATGGCCACTACATAATCTAAGCATAGAAAACATATGATTGATTGGTTTGCTGATCGAATTTTTTTGTTTTATTTGACTTTAGGAGTCATTTTATTAAGGTTAAGTTTTATCCAATACAAATACTGTAGGCAAATTTTTGGGCTTATGTAATCTAATCCTGTCTTGTAGTTTAATTTCAATTAACTGGTATTTAGTATAGGAATGTTCTGCTTCAATTGTGTGTTGTTTTTAGCTTAGTATGGATTAATATTAAGACAAATTAGATCTTTTAAACAAATGCCCTTCAGGTATTTTTATGTTTTTGTTATTTGGGATACACTATATTTATAGGAAAATGAAGTTTTTCACCTGTAGCTGAATTGATTTTCTTTCTGAATATTGCCAAGAGGAGATAGTTTGCTTTTAGAATTATTGTTATAGCCCAACCTGCTTATGCACAGTATTGCCCGCTTTGTCCAATAGACCTTGCTGATTAATCCCTCGAGTAAGTCGAAAGATGCCTCAAGTGTGCTACCAAGTTACCTTATTATTTGTCATATACAGTTCAGGACTTTCCTGTCCCTTCCATGGTGTGAATCACCTAATATGTCTTCTACTTCAGAAGTTCACTAGCTTCAGAGTCTGCCAGTTCTTAACCTTTCACAGACATCATAATCACATTCAATTGGTGTTTTGCACTTGTTCATTCTTCTAAGATTTAGCCATGTCATGTATCAATTTTTTGATTATTTTCTTTGTTTTGGGCTAGTTAGTGCTTTTTTTTTTGTGTGTGAGAGAGTATTTTCTTCATGGTAAGTTTTATTTTTTATGTGGGCTGTTGAAAATTTCTGTGGGGAACAATGTGAAGTATTGTGTTTCAGATGAGGTGTTTATACTGCTATCCTTTGGTGAATTGCAGCTTCCAGATGATATAGAGTGGCATTTCATAGGGAATTTGCAGAGCAATAAAGTCAAGCCACTTTTAAGTATGTTCTCCTTCCTTCCTTCACTGTTCCTTCTCCCATCCTTTTCCTTATGGACCAATAAGGAGAAATGTACCTTTCTATGAAAATAGTTTCAGGATGAAGCGAAATCGTAAAAATCGTGATTACATGATAATTTTGTTGGAGAAACAAGGGGAGAAGACTTTTTTTTGGCGTCCTGGTGAAGTCCGTGGAGGGAAGGGTTGTTTCAAGAGTTGTAAACTTTATCTTGGTGAAAGAAACATACTTGCTTCATCAAATTTTGATTATATTAGGTACTGCAAATATTTTAAAAAATGCTAGATATGGTGAAACAGCTCGCCTTCACTTACATCAGTCAGATGATGGACAAAAAGATTCTATCTCCTCTCTGAGTTGGCATGCATGACATAACTTGAATGACGAATTTGAGCCACATTTTTGTGCAACGGGTATAAATGTATAGAGCTTATAATAAATTCTCGTCATCTTTGTTTTCAGCTGGAGTGCCAAATCTTGCTATGGTGGAGACAGTAGATGATGAAAAGGTAACTAACACAGACTCTGCTACTAATTTGTCTCCTAGTCCAGTAAATATCTTTAGAACATATTCTGGTTGTTGACTTGTTAATACAAACATCTTTTAACAATACAAAAAACATATGCCTAATAATGATTTCACTCTTAACTTTTGTTTCAATTCAAAAATCATTGTATTTATCTCGAATTTCTTGATCGGTTTTGGTCGAAGTATCCAAAATCGTTTGACCACATCTGGTACAAATCCCACACCTACATCCACGACGTGTCAACACAGGTGCGGCACCGAAAGTGAAGAGTCTGTGCAAGAAGGAAATAAAGCCGGTTTTAGTAAGAAAAAAAAAAGGGTTATTAAGTGAATTTAATAAGAAGCCTTTTTATTTTAATGCACATATTTAATTTATTCGGAGCTATTGGAGAGGGATAGACATTTGGGGAATATGAGTTGAAGCACTAACAAGAATATTTATACTATAATATTCAATATTGTGAGTAGTGTTTATTTTATTTTTGAGAATGGTTACCGTATATTTATTAGCATTAAGGAAATTTTGGCCACCATATTTACAGTTCAAAGAATTAGCAAAATCCTGTCCATCTTGCAAAGATTCTTATATTTTGTTTAATACTTTAATATATTTTGTAGATTGCAAATCAGCTTGACCGTGTGGCTGCGAACATTGGAAGAAAGCCATTGAAAGTTTTTATCCAAGTTAATACAAGCGGGGAAGAAAGTGGGTATCTGGAGTATGTCTCTGATTTATTAAGAGTCATTTGATCTATTTTTGTGAACACTACTATATTCATGAAGGAAAAGCTAATCATGATTTGATTCCATAATTGCAGCTAAATCTGGTGTTGAACCAGATGGGTGTCTGGAACTCGTGAAACATGTTACTTCAAACTGCCCTAATCTTGAATTCTGTGGCTTGATGACTA</genome_strand>
        <mrna_strand>ACGGAACCGTCAGATTCAGGAATGGCTGCTGCTTCCGCCACGGATGGTGTCGCTGCGACGGCACTACGGTCGGTAATTCAGCGGATTGAACACGTGGCTGAACGATGTGGCCGCAGATCGGACCAAGTAAGGCTGGTGGCTGTAAGTAAAACTAAGCCAGTATCTCTCCTCAAACAAGTTTATGACGCCGGTCATCGTTGTTTCGGTGAAAATTACGTCAAAGAGCTCATTGAGAAAGCTCCTCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCCAGATGATATAGAGTGGCATTTCATAGGGAATTTGCAGAGCAATAAAGTCAAGCCACTTTTAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGAGTGCCAAATCTTGCTATGGTGGAGACAGTAGATGATGAAAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCAAATCAGCTTGACCGTGTGGCTGCGAACATTGGAAGAAAGCCATTGAAAGTTTTTATCCAAGTTAATACAAGTGGGGAAGAAA................................................................................................................CTAAATCTGGTGTTGAACCAGATGGGTGTCTGGAACTCGTGAAACATGTTACTTCAAACTGCCCTAATCTTGAATTCTGTGGCTTGATGACTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E540908" ref_strand="+" ref_description="SGN-E540908 [TUS-61-G20]">
      <seq>gattcaggaatggctgctgcttccgctacggatggtgtcgctgcgacggcagtacggtcggtaattcagcggattgaacacgtggctgaacgatgtggccgcagatcggaccaagtaaggctggtggctgtaagcaaaactaagccagtatctctcctcaaacaagtttacgacgccggtcatcgttgtttcggtgaaaattacgtcaaagagctcattgagaaagctcctcagcttccagatgatatagagtggcatttcatagggaatttgcagagcaataaagtcaagccacttttaactggagtgccaaatcttgctatggtggagacagtagatgatgaaaagattgcaaatcagcttgaccgtgtggctgcgaacattggaagaaagccattgaaagtttttatccaagttaatacaagcggggaagaaactaaatctggtgttgaaccagatgggtgtctggaactcgtgaaacatgttacttcaaactgccctaatcttgaattctgtggcttgatgactattggaatgccagattatacatcgactcctgaaaactttaagactttagcaaaatgtagaagtgaagtttgcgaggcacttggaatatctgaagatcaatgtgagctgtcaatgggcatgtcaggcgactttgaacttgctgttgagatgggcagtacaaatgttcgagttggatctactatatttggtgcaagggaatatccaacgaagtagtcatcgaactaggttgatgaacccagtttagtgaagagagcttgagcccaacatgtaccttaagattttgcagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="+" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="25138" stop="29766"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="25438" g_stop="25671" g_length="234"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="234" r_length="234" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="25672" i_stop="26593" i_length="922">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="26594" g_stop="26660" g_length="67"/>
          <reference_exon_boundary r_type="cDNA" r_start="235" r_stop="301" r_length="67" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="26661" i_stop="27137" i_length="477">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="27138" g_stop="27184" g_length="47"/>
          <reference_exon_boundary r_type="cDNA" r_start="302" r_stop="348" r_length="47" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="27185" i_stop="27822" i_length="638">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="27823" g_stop="27910" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="349" r_stop="436" r_length="88" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="27911" i_stop="28022" i_length="112">
            <donor d_prob="0.190" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="28023" g_stop="28156" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="437" r_stop="570" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="28157" i_stop="28250" i_length="94">
            <donor d_prob="0.716" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="28251" g_stop="28349" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="571" r_stop="669" r_length="99" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="28350" i_stop="29320" i_length="971">
            <donor d_prob="0.587" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="29321" g_stop="29466" g_length="146"/>
          <reference_exon_boundary r_type="cDNA" r_start="670" r_stop="815" r_length="146" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="+" ref_id="SGN-E540908" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>815</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E540908" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="25438" e_stop="25671"/>
          <exon e_start="26594" e_stop="26660"/>
          <exon e_start="27138" e_stop="27184"/>
          <exon e_start="27823" e_stop="27910"/>
          <exon e_start="28023" e_stop="28156"/>
          <exon e_start="28251" e_stop="28349"/>
          <exon e_start="29321" e_stop="29466"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATTCAGGAATGGCTGCTGCTTCCGCTACGGATGGTGTCGCTGCGACGGCAGTACGGTCGGTAATTCAGCGGATTGAACACGTGGCTGAACGATGTGGCCGCAGATCGGACCAAGTAAGGCTGGTGGCTGTAAGCAAAACTAAGCCAGTATCTCTCCTCAAACAAGTTTACGACGCCGGTCATCGTTGTTTCGGTGAAAATTACGTCAAAGAGCTCATTGAGAAAGCTCCTCAGGTAAAGGTTCTATACTCGTGTGTGATGGCCACTACATAATCTAAGCATAGAAAACATATGATTGATTGGTTTGCTGATCGAATTTTTTTGTTTTATTTGACTTTAGGAGTCATTTTATTAAGGTTAAGTTTTATCCAATACAAATACTGTAGGCAAATTTTTGGGCTTATGTAATCTAATCCTGTCTTGTAGTTTAATTTCAATTAACTGGTATTTAGTATAGGAATGTTCTGCTTCAATTGTGTGTTGTTTTTAGCTTAGTATGGATTAATATTAAGACAAATTAGATCTTTTAAACAAATGCCCTTCAGGTATTTTTATGTTTTTGTTATTTGGGATACACTATATTTATAGGAAAATGAAGTTTTTCACCTGTAGCTGAATTGATTTTCTTTCTGAATATTGCCAAGAGGAGATAGTTTGCTTTTAGAATTATTGTTATAGCCCAACCTGCTTATGCACAGTATTGCCCGCTTTGTCCAATAGACCTTGCTGATTAATCCCTCGAGTAAGTCGAAAGATGCCTCAAGTGTGCTACCAAGTTACCTTATTATTTGTCATATACAGTTCAGGACTTTCCTGTCCCTTCCATGGTGTGAATCACCTAATATGTCTTCTACTTCAGAAGTTCACTAGCTTCAGAGTCTGCCAGTTCTTAACCTTTCACAGACATCATAATCACATTCAATTGGTGTTTTGCACTTGTTCATTCTTCTAAGATTTAGCCATGTCATGTATCAATTTTTTGATTATTTTCTTTGTTTTGGGCTAGTTAGTGCTTTTTTTTTTGTGTGTGAGAGAGTATTTTCTTCATGGTAAGTTTTATTTTTTATGTGGGCTGTTGAAAATTTCTGTGGGGAACAATGTGAAGTATTGTGTTTCAGATGAGGTGTTTATACTGCTATCCTTTGGTGAATTGCAGCTTCCAGATGATATAGAGTGGCATTTCATAGGGAATTTGCAGAGCAATAAAGTCAAGCCACTTTTAAGTATGTTCTCCTTCCTTCCTTCACTGTTCCTTCTCCCATCCTTTTCCTTATGGACCAATAAGGAGAAATGTACCTTTCTATGAAAATAGTTTCAGGATGAAGCGAAATCGTAAAAATCGTGATTACATGATAATTTTGTTGGAGAAACAAGGGGAGAAGACTTTTTTTTGGCGTCCTGGTGAAGTCCGTGGAGGGAAGGGTTGTTTCAAGAGTTGTAAACTTTATCTTGGTGAAAGAAACATACTTGCTTCATCAAATTTTGATTATATTAGGTACTGCAAATATTTTAAAAAATGCTAGATATGGTGAAACAGCTCGCCTTCACTTACATCAGTCAGATGATGGACAAAAAGATTCTATCTCCTCTCTGAGTTGGCATGCATGACATAACTTGAATGACGAATTTGAGCCACATTTTTGTGCAACGGGTATAAATGTATAGAGCTTATAATAAATTCTCGTCATCTTTGTTTTCAGCTGGAGTGCCAAATCTTGCTATGGTGGAGACAGTAGATGATGAAAAGGTAACTAACACAGACTCTGCTACTAATTTGTCTCCTAGTCCAGTAAATATCTTTAGAACATATTCTGGTTGTTGACTTGTTAATACAAACATCTTTTAACAATACAAAAAACATATGCCTAATAATGATTTCACTCTTAACTTTTGTTTCAATTCAAAAATCATTGTATTTATCTCGAATTTCTTGATCGGTTTTGGTCGAAGTATCCAAAATCGTTTGACCACATCTGGTACAAATCCCACACCTACATCCACGACGTGTCAACACAGGTGCGGCACCGAAAGTGAAGAGTCTGTGCAAGAAGGAAATAAAGCCGGTTTTAGTAAGAAAAAAAAAAGGGTTATTAAGTGAATTTAATAAGAAGCCTTTTTATTTTAATGCACATATTTAATTTATTCGGAGCTATTGGAGAGGGATAGACATTTGGGGAATATGAGTTGAAGCACTAACAAGAATATTTATACTATAATATTCAATATTGTGAGTAGTGTTTATTTTATTTTTGAGAATGGTTACCGTATATTTATTAGCATTAAGGAAATTTTGGCCACCATATTTACAGTTCAAAGAATTAGCAAAATCCTGTCCATCTTGCAAAGATTCTTATATTTTGTTTAATACTTTAATATATTTTGTAGATTGCAAATCAGCTTGACCGTGTGGCTGCGAACATTGGAAGAAAGCCATTGAAAGTTTTTATCCAAGTTAATACAAGCGGGGAAGAAAGTGGGTATCTGGAGTATGTCTCTGATTTATTAAGAGTCATTTGATCTATTTTTGTGAACACTACTATATTCATGAAGGAAAAGCTAATCATGATTTGATTCCATAATTGCAGCTAAATCTGGTGTTGAACCAGATGGGTGTCTGGAACTCGTGAAACATGTTACTTCAAACTGCCCTAATCTTGAATTCTGTGGCTTGATGACTATTGGAATGCCAGATTATACATCGACTCCTGAAAACTTTAAGGTTGAGGTTTTATCTTTGTTGTTTCTTCTTGGCCTGGTTGCTATTGTTATATCCTCAACTCAAATATGTTGCTATTTGTCATGCTTGGTTTCAGACTTTAGCAAAATGTAGAAGTGAAGTTTGCGAGGCACTTGGAATATCTGAAGATCAATGTGAGCTGTCAATGGGCATGTCAGGCGACTTTGAACTTGCTGTGAGTGACCTGACTTGTCACTAAGCACATCAAATCATTAGTAAGCTTGGAAGGAACTTGTATAACATGAGTTCTCTGGGGAGCATGTGGTAGTCTGAGTGCACCAATTATACAATCACTCTTTATAAATTAAACCAAAGTATTAACTAGACATCTGACTCAGTTTTCATTACTGGTCTCTGTTGTTAGAATCTTCTTGAGTCTGATGTATAATGCTTTATCGCTGGACAATAAACTCGCCCAGCTCCCCGCCACACCCATGGGATTAAGACGCTCAGACTAGGATTGTAGTTTCACCCCTTAACAGCTTGTTACAATTCAAGGGTTAGTCTGTTTTTATCTTTTGATAAGGTAAAAGTCATGTGACCCGGTTTGAACATTGGAACCAACTAGTGATGCTTATGTTAGTTAGGGTAAGCTGCCCGCCTATATCATACTTCTTGGGGGTGTGGATCTTCCTGGACCCTGTGTGAATGCCGGCTGCCCTTCATATTTGCGCTATTCTCTATCAGTTTCCCATGTGTACTTGTTTTCTGTGGCTGATATTATATATCTGTAGGGTGGATTGTTGTTAAAAGTAGAATTTCGTTTGACGCTCTCAAAAAAGAAAAGAAAAATTTAGTATCACAAGTAGAATTTTATTTGATTAGTTGTTGATTCTTTTGGGAGATCTTATCAGTGATGCGCTGTTCCAACCTCCATCCTACCTCCAATCTGATGACTAGTACTGCAGTCACCCATCAACCTATGCTTGTAGCCTATGGCCCCCTTAATTATGTAAGATATTTTCTTTTAAGGAGTAGTCTAGGCTATTGTATCAGGTAAGCATATTTTATCCTTGTGTCCTGCTATATTCAATAAAAGAAACAAGCACACATTCGTGCTTGCTAGCCAGCATTGGTATTGAATTCTACATATGCTTCGTTTGACCTCATGTTCTGCTATACTTATAATGCTGTCTATTACTACAGGTTGAGATGGGCAGTACAAATGTTCGAGTTGGATCTACTATATTTGGTGCAAGGGAATATCCAACGAAGTAGTCATCGAACTAGGTTGATGAACCCAGTTTAGTGAAGAGAGCTTGAGCCAAACATGTACCTTAAGATTTTGCAGC</genome_strand>
        <mrna_strand>GATTCAGGAATGGCTGCTGCTTCCGCTACGGATGGTGTCGCTGCGACGGCAGTACGGTCGGTAATTCAGCGGATTGAACACGTGGCTGAACGATGTGGCCGCAGATCGGACCAAGTAAGGCTGGTGGCTGTAAGCAAAACTAAGCCAGTATCTCTCCTCAAACAAGTTTACGACGCCGGTCATCGTTGTTTCGGTGAAAATTACGTCAAAGAGCTCATTGAGAAAGCTCCTCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCCAGATGATATAGAGTGGCATTTCATAGGGAATTTGCAGAGCAATAAAGTCAAGCCACTTTTAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGAGTGCCAAATCTTGCTATGGTGGAGACAGTAGATGATGAAAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCAAATCAGCTTGACCGTGTGGCTGCGAACATTGGAAGAAAGCCATTGAAAGTTTTTATCCAAGTTAATACAAGCGGGGAAGAAA................................................................................................................CTAAATCTGGTGTTGAACCAGATGGGTGTCTGGAACTCGTGAAACATGTTACTTCAAACTGCCCTAATCTTGAATTCTGTGGCTTGATGACTATTGGAATGCCAGATTATACATCGACTCCTGAAAACTTTAAG..............................................................................................ACTTTAGCAAAATGTAGAAGTGAAGTTTGCGAGGCACTTGGAATATCTGAAGATCAATGTGAGCTGTCAATGGGCATGTCAGGCGACTTTGAACTTGCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGAGATGGGCAGTACAAATGTTCGAGTTGGATCTACTATATTTGGTGCAAGGGAATATCCAACGAAGTAGTCATCGAACTAGGTTGATGAACCCAGTTTAGTGAAGAGAGCTTGAGCCCAACATGTACCTTAAGATTTTGCAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E293107" ref_strand="+" ref_description="SGN-E293107 [cLET-12-B1]">
      <seq>attcaggaatggctgctgcttccgctacggatggtgtcgctgcgacggcagtacggtcggtaattcagcggattgaacacgtggctgaacgatgtggccgcagatcggaccacgtaaggctggtggctgtaagcaaaactaagccagtatctctcctcaaacaagtttacgacgccgggcatggttgtttcggtgaaaattacgtcaaagagctcattgagaaagctcctcagcttccagatgatatagagtggcatttcatacggaatttgcagagcaataaagtcaagccacttttaactggagtgccaaatcttgctatggtggagacagtggatgatgaaaagattgcaaatcagcttgaccgtgtggctgcgaacattggaagaaagccattgcaagtttttatccaagttaatacaagcggggaagaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="+" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="25139" stop="28209"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="25439" g_stop="25671" g_length="233"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="233" r_length="233" r_score="0.987"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="25672" i_stop="26593" i_length="922">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="26594" g_stop="26660" g_length="67"/>
          <reference_exon_boundary r_type="cDNA" r_start="234" r_stop="300" r_length="67" r_score="0.985"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="26661" i_stop="27137" i_length="477">
            <donor d_prob="0.984" d_score="0.98"/>
            <acceptor a_prob="0.998" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="27138" g_stop="27184" g_length="47"/>
          <reference_exon_boundary r_type="cDNA" r_start="301" r_stop="347" r_length="47" r_score="0.979"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="27185" i_stop="27822" i_length="638">
            <donor d_prob="0.983" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="27823" g_stop="27909" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="348" r_stop="434" r_length="87" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="+" ref_id="SGN-E293107" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>434</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E293107" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="25439" e_stop="25671"/>
          <exon e_start="26594" e_stop="26660"/>
          <exon e_start="27138" e_stop="27184"/>
          <exon e_start="27823" e_stop="27909"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTCAGGAATGGCTGCTGCTTCCGCTACGGATGGTGTCGCTGCGACGGCAGTACGGTCGGTAATTCAGCGGATTGAACACGTGGCTGAACGATGTGGCCGCAGATCGGACCAAGTAAGGCTGGTGGCTGTAAGCAAAACTAAGCCAGTATCTCTCCTCAAACAAGTTTACGACGCCGGTCATCGTTGTTTCGGTGAAAATTACGTCAAAGAGCTCATTGAGAAAGCTCCTCAGGTAAAGGTTCTATACTCGTGTGTGATGGCCACTACATAATCTAAGCATAGAAAACATATGATTGATTGGTTTGCTGATCGAATTTTTTTGTTTTATTTGACTTTAGGAGTCATTTTATTAAGGTTAAGTTTTATCCAATACAAATACTGTAGGCAAATTTTTGGGCTTATGTAATCTAATCCTGTCTTGTAGTTTAATTTCAATTAACTGGTATTTAGTATAGGAATGTTCTGCTTCAATTGTGTGTTGTTTTTAGCTTAGTATGGATTAATATTAAGACAAATTAGATCTTTTAAACAAATGCCCTTCAGGTATTTTTATGTTTTTGTTATTTGGGATACACTATATTTATAGGAAAATGAAGTTTTTCACCTGTAGCTGAATTGATTTTCTTTCTGAATATTGCCAAGAGGAGATAGTTTGCTTTTAGAATTATTGTTATAGCCCAACCTGCTTATGCACAGTATTGCCCGCTTTGTCCAATAGACCTTGCTGATTAATCCCTCGAGTAAGTCGAAAGATGCCTCAAGTGTGCTACCAAGTTACCTTATTATTTGTCATATACAGTTCAGGACTTTCCTGTCCCTTCCATGGTGTGAATCACCTAATATGTCTTCTACTTCAGAAGTTCACTAGCTTCAGAGTCTGCCAGTTCTTAACCTTTCACAGACATCATAATCACATTCAATTGGTGTTTTGCACTTGTTCATTCTTCTAAGATTTAGCCATGTCATGTATCAATTTTTTGATTATTTTCTTTGTTTTGGGCTAGTTAGTGCTTTTTTTTTTGTGTGTGAGAGAGTATTTTCTTCATGGTAAGTTTTATTTTTTATGTGGGCTGTTGAAAATTTCTGTGGGGAACAATGTGAAGTATTGTGTTTCAGATGAGGTGTTTATACTGCTATCCTTTGGTGAATTGCAGCTTCCAGATGATATAGAGTGGCATTTCATAGGGAATTTGCAGAGCAATAAAGTCAAGCCACTTTTAAGTATGTTCTCCTTCCTTCCTTCACTGTTCCTTCTCCCATCCTTTTCCTTATGGACCAATAAGGAGAAATGTACCTTTCTATGAAAATAGTTTCAGGATGAAGCGAAATCGTAAAAATCGTGATTACATGATAATTTTGTTGGAGAAACAAGGGGAGAAGACTTTTTTTTGGCGTCCTGGTGAAGTCCGTGGAGGGAAGGGTTGTTTCAAGAGTTGTAAACTTTATCTTGGTGAAAGAAACATACTTGCTTCATCAAATTTTGATTATATTAGGTACTGCAAATATTTTAAAAAATGCTAGATATGGTGAAACAGCTCGCCTTCACTTACATCAGTCAGATGATGGACAAAAAGATTCTATCTCCTCTCTGAGTTGGCATGCATGACATAACTTGAATGACGAATTTGAGCCACATTTTTGTGCAACGGGTATAAATGTATAGAGCTTATAATAAATTCTCGTCATCTTTGTTTTCAGCTGGAGTGCCAAATCTTGCTATGGTGGAGACAGTAGATGATGAAAAGGTAACTAACACAGACTCTGCTACTAATTTGTCTCCTAGTCCAGTAAATATCTTTAGAACATATTCTGGTTGTTGACTTGTTAATACAAACATCTTTTAACAATACAAAAAACATATGCCTAATAATGATTTCACTCTTAACTTTTGTTTCAATTCAAAAATCATTGTATTTATCTCGAATTTCTTGATCGGTTTTGGTCGAAGTATCCAAAATCGTTTGACCACATCTGGTACAAATCCCACACCTACATCCACGACGTGTCAACACAGGTGCGGCACCGAAAGTGAAGAGTCTGTGCAAGAAGGAAATAAAGCCGGTTTTAGTAAGAAAAAAAAAAGGGTTATTAAGTGAATTTAATAAGAAGCCTTTTTATTTTAATGCACATATTTAATTTATTCGGAGCTATTGGAGAGGGATAGACATTTGGGGAATATGAGTTGAAGCACTAACAAGAATATTTATACTATAATATTCAATATTGTGAGTAGTGTTTATTTTATTTTTGAGAATGGTTACCGTATATTTATTAGCATTAAGGAAATTTTGGCCACCATATTTACAGTTCAAAGAATTAGCAAAATCCTGTCCATCTTGCAAAGATTCTTATATTTTGTTTAATACTTTAATATATTTTGTAGATTGCAAATCAGCTTGACCGTGTGGCTGCGAACATTGGAAGAAAGCCATTGAAAGTTTTTATCCAAGTTAATACAAGCGGGGAAGAA</genome_strand>
        <mrna_strand>ATTCAGGAATGGCTGCTGCTTCCGCTACGGATGGTGTCGCTGCGACGGCAGTACGGTCGGTAATTCAGCGGATTGAACACGTGGCTGAACGATGTGGCCGCAGATCGGACCACGTAAGGCTGGTGGCTGTAAGCAAAACTAAGCCAGTATCTCTCCTCAAACAAGTTTACGACGCCGGGCATGGTTGTTTCGGTGAAAATTACGTCAAAGAGCTCATTGAGAAAGCTCCTCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCCAGATGATATAGAGTGGCATTTCATACGGAATTTGCAGAGCAATAAAGTCAAGCCACTTTTAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGAGTGCCAAATCTTGCTATGGTGGAGACAGTGGATGATGAAAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCAAATCAGCTTGACCGTGTGGCTGCGAACATTGGAAGAAAGCCATTGCAAGTTTTTATCCAAGTTAATACAAGCGGGGAAGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E699173" ref_strand="+" ref_description="SGN-E699173 [FA08DH02]">
      <seq>ccgttatggctgctgcttccgctacggatggtgtcgctgcgacggcagtacggtcggtaattcagcggattgaacacgtggctgaacgatgtggccgcagatcggaccaagtaaggctggtggctgtaagcaaaactaagccagtatctctcctcaaacaagtttacgacgccggtcatcgttgtttcggtgaaaattacgtcaaagagctcattgagaaagctcctcagcttccagatgatatagagtggcatttcatagggaatttgcagagcaataaagtcaagccacttttaactggagtgccaaatcttgctatggtggagacagtagatgatgaaaagattgcaaatcagcttgaccgtgtggctgcgaacattggaagaaagccattgaaagtttttatccaagttaatacaagcggggaagaaactaaatctggtgttgaaccagatgggtgtctggaactcgtgaaacatgttacttcaaactgccctaatcttgaattctgtggcttgatgactattggaatgccagattatacatcgactcctgaaaactttaagactttagcaaaatgtacaagtgaagtttgcgaggcacttggaatatctgaagatcaatgtgagctgtcaatgggcatgtcacgcgactttgaacttgctgttgagatgggcagtacaaatgttcgagttggatctactatatttggtgccaaggaatatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="+" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="25142" stop="29681"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="25442" g_stop="25671" g_length="230"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="230" r_length="230" r_score="0.987"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="25672" i_stop="26593" i_length="922">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="26594" g_stop="26660" g_length="67"/>
          <reference_exon_boundary r_type="cDNA" r_start="231" r_stop="297" r_length="67" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="26661" i_stop="27137" i_length="477">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="27138" g_stop="27184" g_length="47"/>
          <reference_exon_boundary r_type="cDNA" r_start="298" r_stop="344" r_length="47" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="27185" i_stop="27822" i_length="638">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="27823" g_stop="27910" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="345" r_stop="432" r_length="88" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="27911" i_stop="28022" i_length="112">
            <donor d_prob="0.190" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="28023" g_stop="28156" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="433" r_stop="566" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="28157" i_stop="28250" i_length="94">
            <donor d_prob="0.716" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="28251" g_stop="28349" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="567" r_stop="665" r_length="99" r_score="0.980"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="28350" i_stop="29320" i_length="971">
            <donor d_prob="0.587" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="29321" g_stop="29381" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="666" r_stop="726" r_length="61" r_score="0.967"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="+" ref_id="SGN-E699173" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>726</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E699173" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="25442" e_stop="25671"/>
          <exon e_start="26594" e_stop="26660"/>
          <exon e_start="27138" e_stop="27184"/>
          <exon e_start="27823" e_stop="27910"/>
          <exon e_start="28023" e_stop="28156"/>
          <exon e_start="28251" e_stop="28349"/>
          <exon e_start="29321" e_stop="29381"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGGAATGGCTGCTGCTTCCGCTACGGATGGTGTCGCTGCGACGGCAGTACGGTCGGTAATTCAGCGGATTGAACACGTGGCTGAACGATGTGGCCGCAGATCGGACCAAGTAAGGCTGGTGGCTGTAAGCAAAACTAAGCCAGTATCTCTCCTCAAACAAGTTTACGACGCCGGTCATCGTTGTTTCGGTGAAAATTACGTCAAAGAGCTCATTGAGAAAGCTCCTCAGGTAAAGGTTCTATACTCGTGTGTGATGGCCACTACATAATCTAAGCATAGAAAACATATGATTGATTGGTTTGCTGATCGAATTTTTTTGTTTTATTTGACTTTAGGAGTCATTTTATTAAGGTTAAGTTTTATCCAATACAAATACTGTAGGCAAATTTTTGGGCTTATGTAATCTAATCCTGTCTTGTAGTTTAATTTCAATTAACTGGTATTTAGTATAGGAATGTTCTGCTTCAATTGTGTGTTGTTTTTAGCTTAGTATGGATTAATATTAAGACAAATTAGATCTTTTAAACAAATGCCCTTCAGGTATTTTTATGTTTTTGTTATTTGGGATACACTATATTTATAGGAAAATGAAGTTTTTCACCTGTAGCTGAATTGATTTTCTTTCTGAATATTGCCAAGAGGAGATAGTTTGCTTTTAGAATTATTGTTATAGCCCAACCTGCTTATGCACAGTATTGCCCGCTTTGTCCAATAGACCTTGCTGATTAATCCCTCGAGTAAGTCGAAAGATGCCTCAAGTGTGCTACCAAGTTACCTTATTATTTGTCATATACAGTTCAGGACTTTCCTGTCCCTTCCATGGTGTGAATCACCTAATATGTCTTCTACTTCAGAAGTTCACTAGCTTCAGAGTCTGCCAGTTCTTAACCTTTCACAGACATCATAATCACATTCAATTGGTGTTTTGCACTTGTTCATTCTTCTAAGATTTAGCCATGTCATGTATCAATTTTTTGATTATTTTCTTTGTTTTGGGCTAGTTAGTGCTTTTTTTTTTGTGTGTGAGAGAGTATTTTCTTCATGGTAAGTTTTATTTTTTATGTGGGCTGTTGAAAATTTCTGTGGGGAACAATGTGAAGTATTGTGTTTCAGATGAGGTGTTTATACTGCTATCCTTTGGTGAATTGCAGCTTCCAGATGATATAGAGTGGCATTTCATAGGGAATTTGCAGAGCAATAAAGTCAAGCCACTTTTAAGTATGTTCTCCTTCCTTCCTTCACTGTTCCTTCTCCCATCCTTTTCCTTATGGACCAATAAGGAGAAATGTACCTTTCTATGAAAATAGTTTCAGGATGAAGCGAAATCGTAAAAATCGTGATTACATGATAATTTTGTTGGAGAAACAAGGGGAGAAGACTTTTTTTTGGCGTCCTGGTGAAGTCCGTGGAGGGAAGGGTTGTTTCAAGAGTTGTAAACTTTATCTTGGTGAAAGAAACATACTTGCTTCATCAAATTTTGATTATATTAGGTACTGCAAATATTTTAAAAAATGCTAGATATGGTGAAACAGCTCGCCTTCACTTACATCAGTCAGATGATGGACAAAAAGATTCTATCTCCTCTCTGAGTTGGCATGCATGACATAACTTGAATGACGAATTTGAGCCACATTTTTGTGCAACGGGTATAAATGTATAGAGCTTATAATAAATTCTCGTCATCTTTGTTTTCAGCTGGAGTGCCAAATCTTGCTATGGTGGAGACAGTAGATGATGAAAAGGTAACTAACACAGACTCTGCTACTAATTTGTCTCCTAGTCCAGTAAATATCTTTAGAACATATTCTGGTTGTTGACTTGTTAATACAAACATCTTTTAACAATACAAAAAACATATGCCTAATAATGATTTCACTCTTAACTTTTGTTTCAATTCAAAAATCATTGTATTTATCTCGAATTTCTTGATCGGTTTTGGTCGAAGTATCCAAAATCGTTTGACCACATCTGGTACAAATCCCACACCTACATCCACGACGTGTCAACACAGGTGCGGCACCGAAAGTGAAGAGTCTGTGCAAGAAGGAAATAAAGCCGGTTTTAGTAAGAAAAAAAAAAGGGTTATTAAGTGAATTTAATAAGAAGCCTTTTTATTTTAATGCACATATTTAATTTATTCGGAGCTATTGGAGAGGGATAGACATTTGGGGAATATGAGTTGAAGCACTAACAAGAATATTTATACTATAATATTCAATATTGTGAGTAGTGTTTATTTTATTTTTGAGAATGGTTACCGTATATTTATTAGCATTAAGGAAATTTTGGCCACCATATTTACAGTTCAAAGAATTAGCAAAATCCTGTCCATCTTGCAAAGATTCTTATATTTTGTTTAATACTTTAATATATTTTGTAGATTGCAAATCAGCTTGACCGTGTGGCTGCGAACATTGGAAGAAAGCCATTGAAAGTTTTTATCCAAGTTAATACAAGCGGGGAAGAAAGTGGGTATCTGGAGTATGTCTCTGATTTATTAAGAGTCATTTGATCTATTTTTGTGAACACTACTATATTCATGAAGGAAAAGCTAATCATGATTTGATTCCATAATTGCAGCTAAATCTGGTGTTGAACCAGATGGGTGTCTGGAACTCGTGAAACATGTTACTTCAAACTGCCCTAATCTTGAATTCTGTGGCTTGATGACTATTGGAATGCCAGATTATACATCGACTCCTGAAAACTTTAAGGTTGAGGTTTTATCTTTGTTGTTTCTTCTTGGCCTGGTTGCTATTGTTATATCCTCAACTCAAATATGTTGCTATTTGTCATGCTTGGTTTCAGACTTTAGCAAAATGTAGAAGTGAAGTTTGCGAGGCACTTGGAATATCTGAAGATCAATGTGAGCTGTCAATGGGCATGTCAGGCGACTTTGAACTTGCTGTGAGTGACCTGACTTGTCACTAAGCACATCAAATCATTAGTAAGCTTGGAAGGAACTTGTATAACATGAGTTCTCTGGGGAGCATGTGGTAGTCTGAGTGCACCAATTATACAATCACTCTTTATAAATTAAACCAAAGTATTAACTAGACATCTGACTCAGTTTTCATTACTGGTCTCTGTTGTTAGAATCTTCTTGAGTCTGATGTATAATGCTTTATCGCTGGACAATAAACTCGCCCAGCTCCCCGCCACACCCATGGGATTAAGACGCTCAGACTAGGATTGTAGTTTCACCCCTTAACAGCTTGTTACAATTCAAGGGTTAGTCTGTTTTTATCTTTTGATAAGGTAAAAGTCATGTGACCCGGTTTGAACATTGGAACCAACTAGTGATGCTTATGTTAGTTAGGGTAAGCTGCCCGCCTATATCATACTTCTTGGGGGTGTGGATCTTCCTGGACCCTGTGTGAATGCCGGCTGCCCTTCATATTTGCGCTATTCTCTATCAGTTTCCCATGTGTACTTGTTTTCTGTGGCTGATATTATATATCTGTAGGGTGGATTGTTGTTAAAAGTAGAATTTCGTTTGACGCTCTCAAAAAAGAAAAGAAAAATTTAGTATCACAAGTAGAATTTTATTTGATTAGTTGTTGATTCTTTTGGGAGATCTTATCAGTGATGCGCTGTTCCAACCTCCATCCTACCTCCAATCTGATGACTAGTACTGCAGTCACCCATCAACCTATGCTTGTAGCCTATGGCCCCCTTAATTATGTAAGATATTTTCTTTTAAGGAGTAGTCTAGGCTATTGTATCAGGTAAGCATATTTTATCCTTGTGTCCTGCTATATTCAATAAAAGAAACAAGCACACATTCGTGCTTGCTAGCCAGCATTGGTATTGAATTCTACATATGCTTCGTTTGACCTCATGTTCTGCTATACTTATAATGCTGTCTATTACTACAGGTTGAGATGGGCAGTACAAATGTTCGAGTTGGATCTACTATATTTGGTGCAAGGGAATATC</genome_strand>
        <mrna_strand>CCGTTATGGCTGCTGCTTCCGCTACGGATGGTGTCGCTGCGACGGCAGTACGGTCGGTAATTCAGCGGATTGAACACGTGGCTGAACGATGTGGCCGCAGATCGGACCAAGTAAGGCTGGTGGCTGTAAGCAAAACTAAGCCAGTATCTCTCCTCAAACAAGTTTACGACGCCGGTCATCGTTGTTTCGGTGAAAATTACGTCAAAGAGCTCATTGAGAAAGCTCCTCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCCAGATGATATAGAGTGGCATTTCATAGGGAATTTGCAGAGCAATAAAGTCAAGCCACTTTTAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGAGTGCCAAATCTTGCTATGGTGGAGACAGTAGATGATGAAAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCAAATCAGCTTGACCGTGTGGCTGCGAACATTGGAAGAAAGCCATTGAAAGTTTTTATCCAAGTTAATACAAGCGGGGAAGAAA................................................................................................................CTAAATCTGGTGTTGAACCAGATGGGTGTCTGGAACTCGTGAAACATGTTACTTCAAACTGCCCTAATCTTGAATTCTGTGGCTTGATGACTATTGGAATGCCAGATTATACATCGACTCCTGAAAACTTTAAG..............................................................................................ACTTTAGCAAAATGTACAAGTGAAGTTTGCGAGGCACTTGGAATATCTGAAGATCAATGTGAGCTGTCAATGGGCATGTCACGCGACTTTGAACTTGCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGAGATGGGCAGTACAAATGTTCGAGTTGGATCTACTATATTTGGTGCCAAGGAATATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E323224" ref_strand="+" ref_description="SGN-E323224 [cTOB-28-C16]">
      <seq>ctgcttccgctacggatggtgtcgctgcgacggcagtacggtcggtaattcagcggattgaacacgtggctgaacgatgtggccgcagatcggaccaagtaaggctggtggctgtaagcaaaactaagccagtatctctcctcaaacaagtttacgacgccggtcatcgttgtttcggtgaaaattacgtcaaagagctcattgagaaagctcctcagcttccagatgatatagagtggcatttcatagggaatttgcagagcaataaagtcaagccacttttaactggagtgccaaatcttgctatggtggagacagtagatgatgaaaagattgcaaatcagcttgaccgtgtggctgcgaacattggaagaaagccattgaaagtttttatccaagttaatacaagcggggaagaaactaaatctggtgttgaaccagatgggtgtctggaactcgtgaaacatgttacttcaaactgccctaatcttgaattctgtggcttgatgactattggaatgccagattatacatcgactccctgaaacttttagactttagcaaaatgtagaagtgaagtttgcgaagcacttggaatatctgaagatcaatgtgagctgtc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="+" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="25154" stop="28618"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="25454" g_stop="25671" g_length="218"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="218" r_length="218" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="25672" i_stop="26593" i_length="922">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="26594" g_stop="26660" g_length="67"/>
          <reference_exon_boundary r_type="cDNA" r_start="219" r_stop="285" r_length="67" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="26661" i_stop="27137" i_length="477">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="27138" g_stop="27184" g_length="47"/>
          <reference_exon_boundary r_type="cDNA" r_start="286" r_stop="332" r_length="47" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="27185" i_stop="27822" i_length="638">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="27823" g_stop="27910" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="333" r_stop="420" r_length="88" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="27911" i_stop="28022" i_length="112">
            <donor d_prob="0.190" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="28023" g_stop="28156" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="421" r_stop="554" r_length="134" r_score="0.970"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="28157" i_stop="28250" i_length="94">
            <donor d_prob="0.716" d_score="0.92"/>
            <acceptor a_prob="0.989" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="28251" g_stop="28318" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="555" r_stop="622" r_length="68" r_score="0.985"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="+" ref_id="SGN-E323224" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>622</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E323224" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="25454" e_stop="25671"/>
          <exon e_start="26594" e_stop="26660"/>
          <exon e_start="27138" e_stop="27184"/>
          <exon e_start="27823" e_stop="27910"/>
          <exon e_start="28023" e_stop="28156"/>
          <exon e_start="28251" e_stop="28318"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGCTTCCGCTACGGATGGTGTCGCTGCGACGGCAGTACGGTCGGTAATTCAGCGGATTGAACACGTGGCTGAACGATGTGGCCGCAGATCGGACCAAGTAAGGCTGGTGGCTGTAAGCAAAACTAAGCCAGTATCTCTCCTCAAACAAGTTTACGACGCCGGTCATCGTTGTTTCGGTGAAAATTACGTCAAAGAGCTCATTGAGAAAGCTCCTCAGGTAAAGGTTCTATACTCGTGTGTGATGGCCACTACATAATCTAAGCATAGAAAACATATGATTGATTGGTTTGCTGATCGAATTTTTTTGTTTTATTTGACTTTAGGAGTCATTTTATTAAGGTTAAGTTTTATCCAATACAAATACTGTAGGCAAATTTTTGGGCTTATGTAATCTAATCCTGTCTTGTAGTTTAATTTCAATTAACTGGTATTTAGTATAGGAATGTTCTGCTTCAATTGTGTGTTGTTTTTAGCTTAGTATGGATTAATATTAAGACAAATTAGATCTTTTAAACAAATGCCCTTCAGGTATTTTTATGTTTTTGTTATTTGGGATACACTATATTTATAGGAAAATGAAGTTTTTCACCTGTAGCTGAATTGATTTTCTTTCTGAATATTGCCAAGAGGAGATAGTTTGCTTTTAGAATTATTGTTATAGCCCAACCTGCTTATGCACAGTATTGCCCGCTTTGTCCAATAGACCTTGCTGATTAATCCCTCGAGTAAGTCGAAAGATGCCTCAAGTGTGCTACCAAGTTACCTTATTATTTGTCATATACAGTTCAGGACTTTCCTGTCCCTTCCATGGTGTGAATCACCTAATATGTCTTCTACTTCAGAAGTTCACTAGCTTCAGAGTCTGCCAGTTCTTAACCTTTCACAGACATCATAATCACATTCAATTGGTGTTTTGCACTTGTTCATTCTTCTAAGATTTAGCCATGTCATGTATCAATTTTTTGATTATTTTCTTTGTTTTGGGCTAGTTAGTGCTTTTTTTTTTGTGTGTGAGAGAGTATTTTCTTCATGGTAAGTTTTATTTTTTATGTGGGCTGTTGAAAATTTCTGTGGGGAACAATGTGAAGTATTGTGTTTCAGATGAGGTGTTTATACTGCTATCCTTTGGTGAATTGCAGCTTCCAGATGATATAGAGTGGCATTTCATAGGGAATTTGCAGAGCAATAAAGTCAAGCCACTTTTAAGTATGTTCTCCTTCCTTCCTTCACTGTTCCTTCTCCCATCCTTTTCCTTATGGACCAATAAGGAGAAATGTACCTTTCTATGAAAATAGTTTCAGGATGAAGCGAAATCGTAAAAATCGTGATTACATGATAATTTTGTTGGAGAAACAAGGGGAGAAGACTTTTTTTTGGCGTCCTGGTGAAGTCCGTGGAGGGAAGGGTTGTTTCAAGAGTTGTAAACTTTATCTTGGTGAAAGAAACATACTTGCTTCATCAAATTTTGATTATATTAGGTACTGCAAATATTTTAAAAAATGCTAGATATGGTGAAACAGCTCGCCTTCACTTACATCAGTCAGATGATGGACAAAAAGATTCTATCTCCTCTCTGAGTTGGCATGCATGACATAACTTGAATGACGAATTTGAGCCACATTTTTGTGCAACGGGTATAAATGTATAGAGCTTATAATAAATTCTCGTCATCTTTGTTTTCAGCTGGAGTGCCAAATCTTGCTATGGTGGAGACAGTAGATGATGAAAAGGTAACTAACACAGACTCTGCTACTAATTTGTCTCCTAGTCCAGTAAATATCTTTAGAACATATTCTGGTTGTTGACTTGTTAATACAAACATCTTTTAACAATACAAAAAACATATGCCTAATAATGATTTCACTCTTAACTTTTGTTTCAATTCAAAAATCATTGTATTTATCTCGAATTTCTTGATCGGTTTTGGTCGAAGTATCCAAAATCGTTTGACCACATCTGGTACAAATCCCACACCTACATCCACGACGTGTCAACACAGGTGCGGCACCGAAAGTGAAGAGTCTGTGCAAGAAGGAAATAAAGCCGGTTTTAGTAAGAAAAAAAAAAGGGTTATTAAGTGAATTTAATAAGAAGCCTTTTTATTTTAATGCACATATTTAATTTATTCGGAGCTATTGGAGAGGGATAGACATTTGGGGAATATGAGTTGAAGCACTAACAAGAATATTTATACTATAATATTCAATATTGTGAGTAGTGTTTATTTTATTTTTGAGAATGGTTACCGTATATTTATTAGCATTAAGGAAATTTTGGCCACCATATTTACAGTTCAAAGAATTAGCAAAATCCTGTCCATCTTGCAAAGATTCTTATATTTTGTTTAATACTTTAATATATTTTGTAGATTGCAAATCAGCTTGACCGTGTGGCTGCGAACATTGGAAGAAAGCCATTGAAAGTTTTTATCCAAGTTAATACAAGCGGGGAAGAAAGTGGGTATCTGGAGTATGTCTCTGATTTATTAAGAGTCATTTGATCTATTTTTGTGAACACTACTATATTCATGAAGGAAAAGCTAATCATGATTTGATTCCATAATTGCAGCTAAATCTGGTGTTGAACCAGATGGGTGTCTGGAACTCGTGAAACATGTTACTTCAAACTGCCCTAATCTTGAATTCTGTGGCTTGATGACTATTGGAATGCCAGATTATACATCGACTCCTGAAAACTTTAAGGTTGAGGTTTTATCTTTGTTGTTTCTTCTTGGCCTGGTTGCTATTGTTATATCCTCAACTCAAATATGTTGCTATTTGTCATGCTTGGTTTCAGACTTTAGCAAAATGTAGAAGTGAAGTTTGCGAGGCACTTGGAATATCTGAAGATCAATGTGAGCTGTC</genome_strand>
        <mrna_strand>CTGCTTCCGCTACGGATGGTGTCGCTGCGACGGCAGTACGGTCGGTAATTCAGCGGATTGAACACGTGGCTGAACGATGTGGCCGCAGATCGGACCAAGTAAGGCTGGTGGCTGTAAGCAAAACTAAGCCAGTATCTCTCCTCAAACAAGTTTACGACGCCGGTCATCGTTGTTTCGGTGAAAATTACGTCAAAGAGCTCATTGAGAAAGCTCCTCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCCAGATGATATAGAGTGGCATTTCATAGGGAATTTGCAGAGCAATAAAGTCAAGCCACTTTTAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGAGTGCCAAATCTTGCTATGGTGGAGACAGTAGATGATGAAAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCAAATCAGCTTGACCGTGTGGCTGCGAACATTGGAAGAAAGCCATTGAAAGTTTTTATCCAAGTTAATACAAGCGGGGAAGAAA................................................................................................................CTAAATCTGGTGTTGAACCAGATGGGTGTCTGGAACTCGTGAAACATGTTACTTCAAACTGCCCTAATCTTGAATTCTGTGGCTTGATGACTATTGGAATGCCAGATTATACATCGACTCCCTGAAACTTTTAG..............................................................................................ACTTTAGCAAAATGTAGAAGTGAAGTTTGCGAAGCACTTGGAATATCTGAAGATCAATGTGAGCTGTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E323035" ref_strand="+" ref_description="SGN-E323035 [cTOB-28-C17]">
      <seq>ctgcttccgctacggatggtgtcgctgcgacggcagtacggtcggtaattcagcggattgaacacgtggctgaacgatgtggccgcagatcggaccaagtaaggctggtggctgtaagcaaaactaagccagtatctctcctcaaacaagtttacgacgccggtcatcgttgtttcggtgaaaattacgtcaaagagctcattgagaaagctcctcagcttccagatgatatagagtggcatttcatagggaatttgcagagcaataaagtcaagccacttttaactggagtgccaaatcttgctatggtggagacagtagatgatgaaaagattgcaaatcagcttgaccgtgtggctgcgaacattggaagaaagccattgaaagtttttatccaagttaatacaagcggggaagaaactaaatctggtgttgaaccagatgggtgtctggaactcgtgaaacatgttacttcaaactgccctaatcttgaattctgtggcttgatgactattggaatgccagattatacatcgactccctgaaacttttagactttagcaaaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="+" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="25154" stop="28456"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="25454" g_stop="25671" g_length="218"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="218" r_length="218" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="25672" i_stop="26593" i_length="922">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="26594" g_stop="26660" g_length="67"/>
          <reference_exon_boundary r_type="cDNA" r_start="219" r_stop="285" r_length="67" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="26661" i_stop="27137" i_length="477">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="27138" g_stop="27184" g_length="47"/>
          <reference_exon_boundary r_type="cDNA" r_start="286" r_stop="332" r_length="47" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="27185" i_stop="27822" i_length="638">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="27823" g_stop="27910" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="333" r_stop="420" r_length="88" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="27911" i_stop="28022" i_length="112">
            <donor d_prob="0.190" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="28023" g_stop="28156" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="421" r_stop="554" r_length="134" r_score="0.970"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="28157" i_stop="28250" i_length="94">
            <donor d_prob="0.716" d_score="0.92"/>
            <acceptor a_prob="0.989" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="28251" g_stop="28263" g_length="13"/>
          <reference_exon_boundary r_type="cDNA" r_start="555" r_stop="567" r_length="13" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="+" ref_id="SGN-E323035" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>567</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E323035" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="25454" e_stop="25671"/>
          <exon e_start="26594" e_stop="26660"/>
          <exon e_start="27138" e_stop="27184"/>
          <exon e_start="27823" e_stop="27910"/>
          <exon e_start="28023" e_stop="28156"/>
          <exon e_start="28251" e_stop="28263"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGCTTCCGCTACGGATGGTGTCGCTGCGACGGCAGTACGGTCGGTAATTCAGCGGATTGAACACGTGGCTGAACGATGTGGCCGCAGATCGGACCAAGTAAGGCTGGTGGCTGTAAGCAAAACTAAGCCAGTATCTCTCCTCAAACAAGTTTACGACGCCGGTCATCGTTGTTTCGGTGAAAATTACGTCAAAGAGCTCATTGAGAAAGCTCCTCAGGTAAAGGTTCTATACTCGTGTGTGATGGCCACTACATAATCTAAGCATAGAAAACATATGATTGATTGGTTTGCTGATCGAATTTTTTTGTTTTATTTGACTTTAGGAGTCATTTTATTAAGGTTAAGTTTTATCCAATACAAATACTGTAGGCAAATTTTTGGGCTTATGTAATCTAATCCTGTCTTGTAGTTTAATTTCAATTAACTGGTATTTAGTATAGGAATGTTCTGCTTCAATTGTGTGTTGTTTTTAGCTTAGTATGGATTAATATTAAGACAAATTAGATCTTTTAAACAAATGCCCTTCAGGTATTTTTATGTTTTTGTTATTTGGGATACACTATATTTATAGGAAAATGAAGTTTTTCACCTGTAGCTGAATTGATTTTCTTTCTGAATATTGCCAAGAGGAGATAGTTTGCTTTTAGAATTATTGTTATAGCCCAACCTGCTTATGCACAGTATTGCCCGCTTTGTCCAATAGACCTTGCTGATTAATCCCTCGAGTAAGTCGAAAGATGCCTCAAGTGTGCTACCAAGTTACCTTATTATTTGTCATATACAGTTCAGGACTTTCCTGTCCCTTCCATGGTGTGAATCACCTAATATGTCTTCTACTTCAGAAGTTCACTAGCTTCAGAGTCTGCCAGTTCTTAACCTTTCACAGACATCATAATCACATTCAATTGGTGTTTTGCACTTGTTCATTCTTCTAAGATTTAGCCATGTCATGTATCAATTTTTTGATTATTTTCTTTGTTTTGGGCTAGTTAGTGCTTTTTTTTTTGTGTGTGAGAGAGTATTTTCTTCATGGTAAGTTTTATTTTTTATGTGGGCTGTTGAAAATTTCTGTGGGGAACAATGTGAAGTATTGTGTTTCAGATGAGGTGTTTATACTGCTATCCTTTGGTGAATTGCAGCTTCCAGATGATATAGAGTGGCATTTCATAGGGAATTTGCAGAGCAATAAAGTCAAGCCACTTTTAAGTATGTTCTCCTTCCTTCCTTCACTGTTCCTTCTCCCATCCTTTTCCTTATGGACCAATAAGGAGAAATGTACCTTTCTATGAAAATAGTTTCAGGATGAAGCGAAATCGTAAAAATCGTGATTACATGATAATTTTGTTGGAGAAACAAGGGGAGAAGACTTTTTTTTGGCGTCCTGGTGAAGTCCGTGGAGGGAAGGGTTGTTTCAAGAGTTGTAAACTTTATCTTGGTGAAAGAAACATACTTGCTTCATCAAATTTTGATTATATTAGGTACTGCAAATATTTTAAAAAATGCTAGATATGGTGAAACAGCTCGCCTTCACTTACATCAGTCAGATGATGGACAAAAAGATTCTATCTCCTCTCTGAGTTGGCATGCATGACATAACTTGAATGACGAATTTGAGCCACATTTTTGTGCAACGGGTATAAATGTATAGAGCTTATAATAAATTCTCGTCATCTTTGTTTTCAGCTGGAGTGCCAAATCTTGCTATGGTGGAGACAGTAGATGATGAAAAGGTAACTAACACAGACTCTGCTACTAATTTGTCTCCTAGTCCAGTAAATATCTTTAGAACATATTCTGGTTGTTGACTTGTTAATACAAACATCTTTTAACAATACAAAAAACATATGCCTAATAATGATTTCACTCTTAACTTTTGTTTCAATTCAAAAATCATTGTATTTATCTCGAATTTCTTGATCGGTTTTGGTCGAAGTATCCAAAATCGTTTGACCACATCTGGTACAAATCCCACACCTACATCCACGACGTGTCAACACAGGTGCGGCACCGAAAGTGAAGAGTCTGTGCAAGAAGGAAATAAAGCCGGTTTTAGTAAGAAAAAAAAAAGGGTTATTAAGTGAATTTAATAAGAAGCCTTTTTATTTTAATGCACATATTTAATTTATTCGGAGCTATTGGAGAGGGATAGACATTTGGGGAATATGAGTTGAAGCACTAACAAGAATATTTATACTATAATATTCAATATTGTGAGTAGTGTTTATTTTATTTTTGAGAATGGTTACCGTATATTTATTAGCATTAAGGAAATTTTGGCCACCATATTTACAGTTCAAAGAATTAGCAAAATCCTGTCCATCTTGCAAAGATTCTTATATTTTGTTTAATACTTTAATATATTTTGTAGATTGCAAATCAGCTTGACCGTGTGGCTGCGAACATTGGAAGAAAGCCATTGAAAGTTTTTATCCAAGTTAATACAAGCGGGGAAGAAAGTGGGTATCTGGAGTATGTCTCTGATTTATTAAGAGTCATTTGATCTATTTTTGTGAACACTACTATATTCATGAAGGAAAAGCTAATCATGATTTGATTCCATAATTGCAGCTAAATCTGGTGTTGAACCAGATGGGTGTCTGGAACTCGTGAAACATGTTACTTCAAACTGCCCTAATCTTGAATTCTGTGGCTTGATGACTATTGGAATGCCAGATTATACATCGACTCCTGAAAACTTTAAGGTTGAGGTTTTATCTTTGTTGTTTCTTCTTGGCCTGGTTGCTATTGTTATATCCTCAACTCAAATATGTTGCTATTTGTCATGCTTGGTTTCAGACTTTAGCAAAAT</genome_strand>
        <mrna_strand>CTGCTTCCGCTACGGATGGTGTCGCTGCGACGGCAGTACGGTCGGTAATTCAGCGGATTGAACACGTGGCTGAACGATGTGGCCGCAGATCGGACCAAGTAAGGCTGGTGGCTGTAAGCAAAACTAAGCCAGTATCTCTCCTCAAACAAGTTTACGACGCCGGTCATCGTTGTTTCGGTGAAAATTACGTCAAAGAGCTCATTGAGAAAGCTCCTCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCCAGATGATATAGAGTGGCATTTCATAGGGAATTTGCAGAGCAATAAAGTCAAGCCACTTTTAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGAGTGCCAAATCTTGCTATGGTGGAGACAGTAGATGATGAAAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCAAATCAGCTTGACCGTGTGGCTGCGAACATTGGAAGAAAGCCATTGAAAGTTTTTATCCAAGTTAATACAAGCGGGGAAGAAA................................................................................................................CTAAATCTGGTGTTGAACCAGATGGGTGTCTGGAACTCGTGAAACATGTTACTTCAAACTGCCCTAATCTTGAATTCTGTGGCTTGATGACTATTGGAATGCCAGATTATACATCGACTCCCTGAAACTTTTAG..............................................................................................ACTTTAGCAAAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E261824" ref_strand="+" ref_description="SGN-E261824 [cLEG-61-G16]">
      <seq>aaagagctcattgagaaagctcctcagcttccagatgatatagagtggcatttcatagggaatttgcagagcaataaagtcaagccacttttaactggagtgccaaatcttgctatggtggagacagtagatgatgaaaagattgcaaatcagcttgaccgtgtggctgcgaacattggaagaaagccattgaaagtttttatccaagttaataccagcggggaagaaactaaatctggtgttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="+" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="25345" stop="28212"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="25645" g_stop="25671" g_length="27"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="27" r_length="27" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="25672" i_stop="26593" i_length="922">
            <donor d_prob="0.983" d_score="0.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="26594" g_stop="26660" g_length="67"/>
          <reference_exon_boundary r_type="cDNA" r_start="28" r_stop="94" r_length="67" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="26661" i_stop="27137" i_length="477">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="27138" g_stop="27184" g_length="47"/>
          <reference_exon_boundary r_type="cDNA" r_start="95" r_stop="141" r_length="47" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="27185" i_stop="27822" i_length="638">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="27823" g_stop="27910" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="142" r_stop="229" r_length="88" r_score="0.989"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="27911" i_stop="28022" i_length="112">
            <donor d_prob="0.190" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="28023" g_stop="28037" g_length="15"/>
          <reference_exon_boundary r_type="cDNA" r_start="230" r_stop="244" r_length="15" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="+" ref_id="SGN-E261824" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>244</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E261824" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="25645" e_stop="25671"/>
          <exon e_start="26594" e_stop="26660"/>
          <exon e_start="27138" e_stop="27184"/>
          <exon e_start="27823" e_stop="27910"/>
          <exon e_start="28023" e_stop="28037"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAGAGCTCATTGAGAAAGCTCCTCAGGTAAAGGTTCTATACTCGTGTGTGATGGCCACTACATAATCTAAGCATAGAAAACATATGATTGATTGGTTTGCTGATCGAATTTTTTTGTTTTATTTGACTTTAGGAGTCATTTTATTAAGGTTAAGTTTTATCCAATACAAATACTGTAGGCAAATTTTTGGGCTTATGTAATCTAATCCTGTCTTGTAGTTTAATTTCAATTAACTGGTATTTAGTATAGGAATGTTCTGCTTCAATTGTGTGTTGTTTTTAGCTTAGTATGGATTAATATTAAGACAAATTAGATCTTTTAAACAAATGCCCTTCAGGTATTTTTATGTTTTTGTTATTTGGGATACACTATATTTATAGGAAAATGAAGTTTTTCACCTGTAGCTGAATTGATTTTCTTTCTGAATATTGCCAAGAGGAGATAGTTTGCTTTTAGAATTATTGTTATAGCCCAACCTGCTTATGCACAGTATTGCCCGCTTTGTCCAATAGACCTTGCTGATTAATCCCTCGAGTAAGTCGAAAGATGCCTCAAGTGTGCTACCAAGTTACCTTATTATTTGTCATATACAGTTCAGGACTTTCCTGTCCCTTCCATGGTGTGAATCACCTAATATGTCTTCTACTTCAGAAGTTCACTAGCTTCAGAGTCTGCCAGTTCTTAACCTTTCACAGACATCATAATCACATTCAATTGGTGTTTTGCACTTGTTCATTCTTCTAAGATTTAGCCATGTCATGTATCAATTTTTTGATTATTTTCTTTGTTTTGGGCTAGTTAGTGCTTTTTTTTTTGTGTGTGAGAGAGTATTTTCTTCATGGTAAGTTTTATTTTTTATGTGGGCTGTTGAAAATTTCTGTGGGGAACAATGTGAAGTATTGTGTTTCAGATGAGGTGTTTATACTGCTATCCTTTGGTGAATTGCAGCTTCCAGATGATATAGAGTGGCATTTCATAGGGAATTTGCAGAGCAATAAAGTCAAGCCACTTTTAAGTATGTTCTCCTTCCTTCCTTCACTGTTCCTTCTCCCATCCTTTTCCTTATGGACCAATAAGGAGAAATGTACCTTTCTATGAAAATAGTTTCAGGATGAAGCGAAATCGTAAAAATCGTGATTACATGATAATTTTGTTGGAGAAACAAGGGGAGAAGACTTTTTTTTGGCGTCCTGGTGAAGTCCGTGGAGGGAAGGGTTGTTTCAAGAGTTGTAAACTTTATCTTGGTGAAAGAAACATACTTGCTTCATCAAATTTTGATTATATTAGGTACTGCAAATATTTTAAAAAATGCTAGATATGGTGAAACAGCTCGCCTTCACTTACATCAGTCAGATGATGGACAAAAAGATTCTATCTCCTCTCTGAGTTGGCATGCATGACATAACTTGAATGACGAATTTGAGCCACATTTTTGTGCAACGGGTATAAATGTATAGAGCTTATAATAAATTCTCGTCATCTTTGTTTTCAGCTGGAGTGCCAAATCTTGCTATGGTGGAGACAGTAGATGATGAAAAGGTAACTAACACAGACTCTGCTACTAATTTGTCTCCTAGTCCAGTAAATATCTTTAGAACATATTCTGGTTGTTGACTTGTTAATACAAACATCTTTTAACAATACAAAAAACATATGCCTAATAATGATTTCACTCTTAACTTTTGTTTCAATTCAAAAATCATTGTATTTATCTCGAATTTCTTGATCGGTTTTGGTCGAAGTATCCAAAATCGTTTGACCACATCTGGTACAAATCCCACACCTACATCCACGACGTGTCAACACAGGTGCGGCACCGAAAGTGAAGAGTCTGTGCAAGAAGGAAATAAAGCCGGTTTTAGTAAGAAAAAAAAAAGGGTTATTAAGTGAATTTAATAAGAAGCCTTTTTATTTTAATGCACATATTTAATTTATTCGGAGCTATTGGAGAGGGATAGACATTTGGGGAATATGAGTTGAAGCACTAACAAGAATATTTATACTATAATATTCAATATTGTGAGTAGTGTTTATTTTATTTTTGAGAATGGTTACCGTATATTTATTAGCATTAAGGAAATTTTGGCCACCATATTTACAGTTCAAAGAATTAGCAAAATCCTGTCCATCTTGCAAAGATTCTTATATTTTGTTTAATACTTTAATATATTTTGTAGATTGCAAATCAGCTTGACCGTGTGGCTGCGAACATTGGAAGAAAGCCATTGAAAGTTTTTATCCAAGTTAATACAAGCGGGGAAGAAAGTGGGTATCTGGAGTATGTCTCTGATTTATTAAGAGTCATTTGATCTATTTTTGTGAACACTACTATATTCATGAAGGAAAAGCTAATCATGATTTGATTCCATAATTGCAGCTAAATCTGGTGTTG</genome_strand>
        <mrna_strand>AAAGAGCTCATTGAGAAAGCTCCTCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCCAGATGATATAGAGTGGCATTTCATAGGGAATTTGCAGAGCAATAAAGTCAAGCCACTTTTAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGAGTGCCAAATCTTGCTATGGTGGAGACAGTAGATGATGAAAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCAAATCAGCTTGACCGTGTGGCTGCGAACATTGGAAGAAAGCCATTGAAAGTTTTTATCCAAGTTAATACCAGCGGGGAAGAAA................................................................................................................CTAAATCTGGTGTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E260203" ref_strand="+" ref_description="SGN-E260203 [cLEG-53-A23]">
      <seq>gctcattgagaaagctcctcagcttccagatgatatagagtggcatttcatagggaatttgcagagcaataaagtcaagccacttttaactggagtgccaaatcttgctatggtggagacagtagatgatgaaaagattgcaaatcagcttgaccgtgtggctgcgaacattggaagaaagccattgaaagtttttatccaagttaatacaagcggggaagaaactaaatctggtgttgaaccagatgggtgtctggaactcgtgaaacatgttacttcaaactgccctaatcttgaattctgtggcttgatgactattggaatgccagattatacatccactcctgaaaactttaagactttagcaaaatgtataagtgaagtttgcgaggcacttggaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="+" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="25350" stop="28593"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="25650" g_stop="25671" g_length="22"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="22" r_length="22" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="25672" i_stop="26593" i_length="922">
            <donor d_prob="0.983" d_score="0.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="26594" g_stop="26660" g_length="67"/>
          <reference_exon_boundary r_type="cDNA" r_start="23" r_stop="89" r_length="67" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="26661" i_stop="27137" i_length="477">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="27138" g_stop="27184" g_length="47"/>
          <reference_exon_boundary r_type="cDNA" r_start="90" r_stop="136" r_length="47" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="27185" i_stop="27822" i_length="638">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="27823" g_stop="27910" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="137" r_stop="224" r_length="88" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="27911" i_stop="28022" i_length="112">
            <donor d_prob="0.190" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="28023" g_stop="28156" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="225" r_stop="358" r_length="134" r_score="0.993"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="28157" i_stop="28250" i_length="94">
            <donor d_prob="0.716" d_score="0.98"/>
            <acceptor a_prob="0.989" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="28251" g_stop="28293" g_length="43"/>
          <reference_exon_boundary r_type="cDNA" r_start="359" r_stop="401" r_length="43" r_score="0.977"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="+" ref_id="SGN-E260203" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>401</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E260203" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="25650" e_stop="25671"/>
          <exon e_start="26594" e_stop="26660"/>
          <exon e_start="27138" e_stop="27184"/>
          <exon e_start="27823" e_stop="27910"/>
          <exon e_start="28023" e_stop="28156"/>
          <exon e_start="28251" e_stop="28293"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTCATTGAGAAAGCTCCTCAGGTAAAGGTTCTATACTCGTGTGTGATGGCCACTACATAATCTAAGCATAGAAAACATATGATTGATTGGTTTGCTGATCGAATTTTTTTGTTTTATTTGACTTTAGGAGTCATTTTATTAAGGTTAAGTTTTATCCAATACAAATACTGTAGGCAAATTTTTGGGCTTATGTAATCTAATCCTGTCTTGTAGTTTAATTTCAATTAACTGGTATTTAGTATAGGAATGTTCTGCTTCAATTGTGTGTTGTTTTTAGCTTAGTATGGATTAATATTAAGACAAATTAGATCTTTTAAACAAATGCCCTTCAGGTATTTTTATGTTTTTGTTATTTGGGATACACTATATTTATAGGAAAATGAAGTTTTTCACCTGTAGCTGAATTGATTTTCTTTCTGAATATTGCCAAGAGGAGATAGTTTGCTTTTAGAATTATTGTTATAGCCCAACCTGCTTATGCACAGTATTGCCCGCTTTGTCCAATAGACCTTGCTGATTAATCCCTCGAGTAAGTCGAAAGATGCCTCAAGTGTGCTACCAAGTTACCTTATTATTTGTCATATACAGTTCAGGACTTTCCTGTCCCTTCCATGGTGTGAATCACCTAATATGTCTTCTACTTCAGAAGTTCACTAGCTTCAGAGTCTGCCAGTTCTTAACCTTTCACAGACATCATAATCACATTCAATTGGTGTTTTGCACTTGTTCATTCTTCTAAGATTTAGCCATGTCATGTATCAATTTTTTGATTATTTTCTTTGTTTTGGGCTAGTTAGTGCTTTTTTTTTTGTGTGTGAGAGAGTATTTTCTTCATGGTAAGTTTTATTTTTTATGTGGGCTGTTGAAAATTTCTGTGGGGAACAATGTGAAGTATTGTGTTTCAGATGAGGTGTTTATACTGCTATCCTTTGGTGAATTGCAGCTTCCAGATGATATAGAGTGGCATTTCATAGGGAATTTGCAGAGCAATAAAGTCAAGCCACTTTTAAGTATGTTCTCCTTCCTTCCTTCACTGTTCCTTCTCCCATCCTTTTCCTTATGGACCAATAAGGAGAAATGTACCTTTCTATGAAAATAGTTTCAGGATGAAGCGAAATCGTAAAAATCGTGATTACATGATAATTTTGTTGGAGAAACAAGGGGAGAAGACTTTTTTTTGGCGTCCTGGTGAAGTCCGTGGAGGGAAGGGTTGTTTCAAGAGTTGTAAACTTTATCTTGGTGAAAGAAACATACTTGCTTCATCAAATTTTGATTATATTAGGTACTGCAAATATTTTAAAAAATGCTAGATATGGTGAAACAGCTCGCCTTCACTTACATCAGTCAGATGATGGACAAAAAGATTCTATCTCCTCTCTGAGTTGGCATGCATGACATAACTTGAATGACGAATTTGAGCCACATTTTTGTGCAACGGGTATAAATGTATAGAGCTTATAATAAATTCTCGTCATCTTTGTTTTCAGCTGGAGTGCCAAATCTTGCTATGGTGGAGACAGTAGATGATGAAAAGGTAACTAACACAGACTCTGCTACTAATTTGTCTCCTAGTCCAGTAAATATCTTTAGAACATATTCTGGTTGTTGACTTGTTAATACAAACATCTTTTAACAATACAAAAAACATATGCCTAATAATGATTTCACTCTTAACTTTTGTTTCAATTCAAAAATCATTGTATTTATCTCGAATTTCTTGATCGGTTTTGGTCGAAGTATCCAAAATCGTTTGACCACATCTGGTACAAATCCCACACCTACATCCACGACGTGTCAACACAGGTGCGGCACCGAAAGTGAAGAGTCTGTGCAAGAAGGAAATAAAGCCGGTTTTAGTAAGAAAAAAAAAAGGGTTATTAAGTGAATTTAATAAGAAGCCTTTTTATTTTAATGCACATATTTAATTTATTCGGAGCTATTGGAGAGGGATAGACATTTGGGGAATATGAGTTGAAGCACTAACAAGAATATTTATACTATAATATTCAATATTGTGAGTAGTGTTTATTTTATTTTTGAGAATGGTTACCGTATATTTATTAGCATTAAGGAAATTTTGGCCACCATATTTACAGTTCAAAGAATTAGCAAAATCCTGTCCATCTTGCAAAGATTCTTATATTTTGTTTAATACTTTAATATATTTTGTAGATTGCAAATCAGCTTGACCGTGTGGCTGCGAACATTGGAAGAAAGCCATTGAAAGTTTTTATCCAAGTTAATACAAGCGGGGAAGAAAGTGGGTATCTGGAGTATGTCTCTGATTTATTAAGAGTCATTTGATCTATTTTTGTGAACACTACTATATTCATGAAGGAAAAGCTAATCATGATTTGATTCCATAATTGCAGCTAAATCTGGTGTTGAACCAGATGGGTGTCTGGAACTCGTGAAACATGTTACTTCAAACTGCCCTAATCTTGAATTCTGTGGCTTGATGACTATTGGAATGCCAGATTATACATCGACTCCTGAAAACTTTAAGGTTGAGGTTTTATCTTTGTTGTTTCTTCTTGGCCTGGTTGCTATTGTTATATCCTCAACTCAAATATGTTGCTATTTGTCATGCTTGGTTTCAGACTTTAGCAAAATGTAGAAGTGAAGTTTGCGAGGCACTTGGAA</genome_strand>
        <mrna_strand>GCTCATTGAGAAAGCTCCTCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCCAGATGATATAGAGTGGCATTTCATAGGGAATTTGCAGAGCAATAAAGTCAAGCCACTTTTAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGAGTGCCAAATCTTGCTATGGTGGAGACAGTAGATGATGAAAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCAAATCAGCTTGACCGTGTGGCTGCGAACATTGGAAGAAAGCCATTGAAAGTTTTTATCCAAGTTAATACAAGCGGGGAAGAAA................................................................................................................CTAAATCTGGTGTTGAACCAGATGGGTGTCTGGAACTCGTGAAACATGTTACTTCAAACTGCCCTAATCTTGAATTCTGTGGCTTGATGACTATTGGAATGCCAGATTATACATCCACTCCTGAAAACTTTAAG..............................................................................................ACTTTAGCAAAATGTATAAGTGAAGTTTGCGAGGCACTTGGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E260312" ref_strand="+" ref_description="SGN-E260312 [cLEG-53-A24]">
      <seq>gagaaagctcctcagcttctgatgatatagagtggcttttttagggaatttgcagagcaataaagtcaagccacttttaactggagtgccaaatcttgctatggtggagacagtagatgatgaaaagattgcaaatcagcttgaccgtgtggctgcgaacattggaagaaagccattgaaagtttttatccaagttaatacaagcggggaagaaactaaatctggtgttgaaccagatgggtgtctggaactcgtgaaacatgttacttcaaactgccctaatcttgaattctgtggcttgatgactattggaatgccagattatacatcgactcctgaaaactttaagactttagcaaaatgtagaagtgaagtttgcgaggcacttggaatatctgaagatcaatgtgagctgtcaatgggcatgtcaggcgactttgaacttgctgttgagatgggcagtacaaatgttcgagttggatctactatatttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="+" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="26291" stop="29666"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26594" g_stop="26660" g_length="67"/>
          <reference_exon_boundary r_type="cDNA" r_start="16" r_stop="80" r_length="65" r_score="0.925"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="26661" i_stop="27137" i_length="477">
            <donor d_prob="0.984" d_score="0.94"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="27138" g_stop="27184" g_length="47"/>
          <reference_exon_boundary r_type="cDNA" r_start="81" r_stop="127" r_length="47" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="27185" i_stop="27822" i_length="638">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="27823" g_stop="27910" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="128" r_stop="215" r_length="88" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="27911" i_stop="28022" i_length="112">
            <donor d_prob="0.190" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="28023" g_stop="28156" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="216" r_stop="349" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="28157" i_stop="28250" i_length="94">
            <donor d_prob="0.716" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="28251" g_stop="28349" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="350" r_stop="448" r_length="99" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="28350" i_stop="29320" i_length="971">
            <donor d_prob="0.587" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="29321" g_stop="29366" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="449" r_stop="494" r_length="46" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="+" ref_id="SGN-E260312" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>481</cumulative_length_of_scored_exons>
        <coverage percentage="0.974" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E260312" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26594" e_stop="26660"/>
          <exon e_start="27138" e_stop="27184"/>
          <exon e_start="27823" e_stop="27910"/>
          <exon e_start="28023" e_stop="28156"/>
          <exon e_start="28251" e_stop="28349"/>
          <exon e_start="29321" e_stop="29366"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTCCAGATGATATAGAGTGGCATTTCATAGGGAATTTGCAGAGCAATAAAGTCAAGCCACTTTTAAGTATGTTCTCCTTCCTTCCTTCACTGTTCCTTCTCCCATCCTTTTCCTTATGGACCAATAAGGAGAAATGTACCTTTCTATGAAAATAGTTTCAGGATGAAGCGAAATCGTAAAAATCGTGATTACATGATAATTTTGTTGGAGAAACAAGGGGAGAAGACTTTTTTTTGGCGTCCTGGTGAAGTCCGTGGAGGGAAGGGTTGTTTCAAGAGTTGTAAACTTTATCTTGGTGAAAGAAACATACTTGCTTCATCAAATTTTGATTATATTAGGTACTGCAAATATTTTAAAAAATGCTAGATATGGTGAAACAGCTCGCCTTCACTTACATCAGTCAGATGATGGACAAAAAGATTCTATCTCCTCTCTGAGTTGGCATGCATGACATAACTTGAATGACGAATTTGAGCCACATTTTTGTGCAACGGGTATAAATGTATAGAGCTTATAATAAATTCTCGTCATCTTTGTTTTCAGCTGGAGTGCCAAATCTTGCTATGGTGGAGACAGTAGATGATGAAAAGGTAACTAACACAGACTCTGCTACTAATTTGTCTCCTAGTCCAGTAAATATCTTTAGAACATATTCTGGTTGTTGACTTGTTAATACAAACATCTTTTAACAATACAAAAAACATATGCCTAATAATGATTTCACTCTTAACTTTTGTTTCAATTCAAAAATCATTGTATTTATCTCGAATTTCTTGATCGGTTTTGGTCGAAGTATCCAAAATCGTTTGACCACATCTGGTACAAATCCCACACCTACATCCACGACGTGTCAACACAGGTGCGGCACCGAAAGTGAAGAGTCTGTGCAAGAAGGAAATAAAGCCGGTTTTAGTAAGAAAAAAAAAAGGGTTATTAAGTGAATTTAATAAGAAGCCTTTTTATTTTAATGCACATATTTAATTTATTCGGAGCTATTGGAGAGGGATAGACATTTGGGGAATATGAGTTGAAGCACTAACAAGAATATTTATACTATAATATTCAATATTGTGAGTAGTGTTTATTTTATTTTTGAGAATGGTTACCGTATATTTATTAGCATTAAGGAAATTTTGGCCACCATATTTACAGTTCAAAGAATTAGCAAAATCCTGTCCATCTTGCAAAGATTCTTATATTTTGTTTAATACTTTAATATATTTTGTAGATTGCAAATCAGCTTGACCGTGTGGCTGCGAACATTGGAAGAAAGCCATTGAAAGTTTTTATCCAAGTTAATACAAGCGGGGAAGAAAGTGGGTATCTGGAGTATGTCTCTGATTTATTAAGAGTCATTTGATCTATTTTTGTGAACACTACTATATTCATGAAGGAAAAGCTAATCATGATTTGATTCCATAATTGCAGCTAAATCTGGTGTTGAACCAGATGGGTGTCTGGAACTCGTGAAACATGTTACTTCAAACTGCCCTAATCTTGAATTCTGTGGCTTGATGACTATTGGAATGCCAGATTATACATCGACTCCTGAAAACTTTAAGGTTGAGGTTTTATCTTTGTTGTTTCTTCTTGGCCTGGTTGCTATTGTTATATCCTCAACTCAAATATGTTGCTATTTGTCATGCTTGGTTTCAGACTTTAGCAAAATGTAGAAGTGAAGTTTGCGAGGCACTTGGAATATCTGAAGATCAATGTGAGCTGTCAATGGGCATGTCAGGCGACTTTGAACTTGCTGTGAGTGACCTGACTTGTCACTAAGCACATCAAATCATTAGTAAGCTTGGAAGGAACTTGTATAACATGAGTTCTCTGGGGAGCATGTGGTAGTCTGAGTGCACCAATTATACAATCACTCTTTATAAATTAAACCAAAGTATTAACTAGACATCTGACTCAGTTTTCATTACTGGTCTCTGTTGTTAGAATCTTCTTGAGTCTGATGTATAATGCTTTATCGCTGGACAATAAACTCGCCCAGCTCCCCGCCACACCCATGGGATTAAGACGCTCAGACTAGGATTGTAGTTTCACCCCTTAACAGCTTGTTACAATTCAAGGGTTAGTCTGTTTTTATCTTTTGATAAGGTAAAAGTCATGTGACCCGGTTTGAACATTGGAACCAACTAGTGATGCTTATGTTAGTTAGGGTAAGCTGCCCGCCTATATCATACTTCTTGGGGGTGTGGATCTTCCTGGACCCTGTGTGAATGCCGGCTGCCCTTCATATTTGCGCTATTCTCTATCAGTTTCCCATGTGTACTTGTTTTCTGTGGCTGATATTATATATCTGTAGGGTGGATTGTTGTTAAAAGTAGAATTTCGTTTGACGCTCTCAAAAAAGAAAAGAAAAATTTAGTATCACAAGTAGAATTTTATTTGATTAGTTGTTGATTCTTTTGGGAGATCTTATCAGTGATGCGCTGTTCCAACCTCCATCCTACCTCCAATCTGATGACTAGTACTGCAGTCACCCATCAACCTATGCTTGTAGCCTATGGCCCCCTTAATTATGTAAGATATTTTCTTTTAAGGAGTAGTCTAGGCTATTGTATCAGGTAAGCATATTTTATCCTTGTGTCCTGCTATATTCAATAAAAGAAACAAGCACACATTCGTGCTTGCTAGCCAGCATTGGTATTGAATTCTACATATGCTTCGTTTGACCTCATGTTCTGCTATACTTATAATGCTGTCTATTACTACAGGTTGAGATGGGCAGTACAAATGTTCGAGTTGGATCTACTATATTTG</genome_strand>
        <mrna_strand>CTT-CTGATGATATAGAGTGGC-TTTTTTAGGGAATTTGCAGAGCAATAAAGTCAAGCCACTTTTAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGAGTGCCAAATCTTGCTATGGTGGAGACAGTAGATGATGAAAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCAAATCAGCTTGACCGTGTGGCTGCGAACATTGGAAGAAAGCCATTGAAAGTTTTTATCCAAGTTAATACAAGCGGGGAAGAAA................................................................................................................CTAAATCTGGTGTTGAACCAGATGGGTGTCTGGAACTCGTGAAACATGTTACTTCAAACTGCCCTAATCTTGAATTCTGTGGCTTGATGACTATTGGAATGCCAGATTATACATCGACTCCTGAAAACTTTAAG..............................................................................................ACTTTAGCAAAATGTAGAAGTGAAGTTTGCGAGGCACTTGGAATATCTGAAGATCAATGTGAGCTGTCAATGGGCATGTCAGGCGACTTTGAACTTGCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGAGATGGGCAGTACAAATGTTCGAGTTGGATCTACTATATTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E540906" ref_strand="+" ref_description="SGN-E540906 [TUS-61-G20](-)">
      <seq>tgaattctgtggcttgatgactattggaatgccagattatacatcgactcctgaaaactttaagactttagcaaaatgtagaagtgaagtttgcgaggcacttggaatatctgaagatcaatgtgagctgtcaatgggcatgtcaggcgactttgaacttgctgttgagatgggcagtacaaatgttcgagttggatctactatatttggtgcaagggaatatccaacgaagtagtcatcgaactaggttgatgaacccagtttagtgaagagagcttgagccaaacatgtaccttaagattttgcagcttcatgtcggaatatgagtgtttgtacgatgccactatggacctcattggctatgtggctacaatatcctgtctgtattctatctattattactgctgaacatagtcttgactcttgagctgcgatctcgatgttcaatagtattttgggatttgatagactctcgtctagatgtactaattgatgataatctgtgagaatacttttggtccgtggatcttcttttttgatagaacgactaaactatgcagggcagctaacagtcgtaacttgtgcaaacatgagttatgtattatttaagtcataaaattattatttttatctattaaaaagaaaaaaaaaaaactcgaggggggcccg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="+" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="27793" stop="129758"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28093" g_stop="28156" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="64" r_length="64" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="28157" i_stop="28250" i_length="94">
            <donor d_prob="0.716" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28251" g_stop="28349" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="65" r_stop="163" r_length="99" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28350" i_stop="29320" i_length="971">
            <donor d_prob="0.587" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="29321" g_stop="29796" g_length="476"/>
          <reference_exon_boundary r_type="cDNA" r_start="164" r_stop="639" r_length="476" r_score="0.998"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="29797" i_stop="30013" i_length="217">
            <donor d_prob="0.000" d_score="0.98"/>
            <acceptor a_prob="0.054" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="30014" g_stop="30043" g_length="30"/>
          <reference_exon_boundary r_type="cDNA" r_start="640" r_stop="669" r_length="30" r_score="0.400"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="+" ref_id="SGN-E540906" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>669</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E540906" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28093" e_stop="28156"/>
          <exon e_start="28251" e_stop="28349"/>
          <exon e_start="29321" e_stop="29796"/>
          <exon e_start="30014" e_stop="30043"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAATTCTGTGGCTTGATGACTATTGGAATGCCAGATTATACATCGACTCCTGAAAACTTTAAGGTTGAGGTTTTATCTTTGTTGTTTCTTCTTGGCCTGGTTGCTATTGTTATATCCTCAACTCAAATATGTTGCTATTTGTCATGCTTGGTTTCAGACTTTAGCAAAATGTAGAAGTGAAGTTTGCGAGGCACTTGGAATATCTGAAGATCAATGTGAGCTGTCAATGGGCATGTCAGGCGACTTTGAACTTGCTGTGAGTGACCTGACTTGTCACTAAGCACATCAAATCATTAGTAAGCTTGGAAGGAACTTGTATAACATGAGTTCTCTGGGGAGCATGTGGTAGTCTGAGTGCACCAATTATACAATCACTCTTTATAAATTAAACCAAAGTATTAACTAGACATCTGACTCAGTTTTCATTACTGGTCTCTGTTGTTAGAATCTTCTTGAGTCTGATGTATAATGCTTTATCGCTGGACAATAAACTCGCCCAGCTCCCCGCCACACCCATGGGATTAAGACGCTCAGACTAGGATTGTAGTTTCACCCCTTAACAGCTTGTTACAATTCAAGGGTTAGTCTGTTTTTATCTTTTGATAAGGTAAAAGTCATGTGACCCGGTTTGAACATTGGAACCAACTAGTGATGCTTATGTTAGTTAGGGTAAGCTGCCCGCCTATATCATACTTCTTGGGGGTGTGGATCTTCCTGGACCCTGTGTGAATGCCGGCTGCCCTTCATATTTGCGCTATTCTCTATCAGTTTCCCATGTGTACTTGTTTTCTGTGGCTGATATTATATATCTGTAGGGTGGATTGTTGTTAAAAGTAGAATTTCGTTTGACGCTCTCAAAAAAGAAAAGAAAAATTTAGTATCACAAGTAGAATTTTATTTGATTAGTTGTTGATTCTTTTGGGAGATCTTATCAGTGATGCGCTGTTCCAACCTCCATCCTACCTCCAATCTGATGACTAGTACTGCAGTCACCCATCAACCTATGCTTGTAGCCTATGGCCCCCTTAATTATGTAAGATATTTTCTTTTAAGGAGTAGTCTAGGCTATTGTATCAGGTAAGCATATTTTATCCTTGTGTCCTGCTATATTCAATAAAAGAAACAAGCACACATTCGTGCTTGCTAGCCAGCATTGGTATTGAATTCTACATATGCTTCGTTTGACCTCATGTTCTGCTATACTTATAATGCTGTCTATTACTACAGGTTGAGATGGGCAGTACAAATGTTCGAGTTGGATCTACTATATTTGGTGCAAGGGAATATCCAACGAAGTAGTCATCGAACTAGGTTGATGAACCCAGTTTAGTGAAGAGAGCTTGAGCCAAACATGTACCTTAAGATTTTGCAGCTTCATGTCGGAATATGAGTGTTTGTACGATGCCACTATGGACCTCATTGGCTATGTGGCTACAATATCCTGTCTGTATTCTATCTATTATTACTGCTGAACATAGTCTTGACTCTTGAGCTGCGATCTCGATGTTCAATAGTATTTTGGGATTTGATAGACTCTCGTCTAGATGTACTAATTGATGATAATCTGTGAGAATACTTTTGGTCCGTGGATCTTCTTTTTTGATAGAACGACTAAACTATGCAGGGCAGCTAACAGTCGTAACTTGTGCAAACATGAGTTATGTATTATTTAAGTCATAAAATTATTATTTTTATCTATTAAGGTCACTGAGTGTTAATGTAAAGTCATATTTGATCTCAGTGATGTCGCTGCACGTATTTTTTACTCATAAACTATAGCTCTTCGTGAACTTTAAATTTTCGATGTTAGCTAATATAATGTCAATAATAAATTTGAAGGGATTAGTATTTAGTACCAATATGGAAACTCTGGTGACCTGGGTATGTATACCTTCTATAAATCTTGAACAAAAAGATCAGTGCAGAAAAAACCCGGAATAATGTGACCAT</genome_strand>
        <mrna_strand>TGAATTCTGTGGCTTGATGACTATTGGAATGCCAGATTATACATCGACTCCTGAAAACTTTAAG..............................................................................................ACTTTAGCAAAATGTAGAAGTGAAGTTTGCGAGGCACTTGGAATATCTGAAGATCAATGTGAGCTGTCAATGGGCATGTCAGGCGACTTTGAACTTGCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGAGATGGGCAGTACAAATGTTCGAGTTGGATCTACTATATTTGGTGCAAGGGAATATCCAACGAAGTAGTCATCGAACTAGGTTGATGAACCCAGTTTAGTGAAGAGAGCTTGAGCCAAACATGTACCTTAAGATTTTGCAGCTTCATGTCGGAATATGAGTGTTTGTACGATGCCACTATGGACCTCATTGGCTATGTGGCTACAATATCCTGTCTGTATTCTATCTATTATTACTGCTGAACATAGTCTTGACTCTTGAGCTGCGATCTCGATGTTCAATAGTATTTTGGGATTTGATAGACTCTCGTCTAGATGTACTAATTGATGATAATCTGTGAGAATACTTTTGGTCCGTGGATCTTCTTTTTTGATAGAACGACTAAACTATGCAGGGCAGCTAACAGTCGTAACTTGTGCAAACATGAGTTATGTATTATTTAAGTCATAAAATTATTATTTTTATCTATTAAA.........................................................................................................................................................................................................................AAGAAAAAAAAAAAACTCGAGGGGGGCCCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E352869" ref_strand="+" ref_description="SGN-E352869 [cTOS-11-B1]">
      <seq>tttagcaaaatgtagaagtgaagtttgcgaggcacttggaatatctgaagatcaatgtgagctgtcaatgggcatgtcaggcgactttgaacttgctgttgagatgggcagtacaaatgttcgagttggatctactatatttggtgcaagggaatatccaacgaagtagtcatcgaactaggttgatgaacccagtttagtgaagagagcttgagccaaacatgtaccttaagattttgcagcttcatgtcggaatatgagtgtttgtacgatgccactatggacctcattggctatgtggctacaatatcctgtctgtattctatctattattactgctgaacatagtcttgactcttgagctgcgatctcgatgttcaatagtattttgggatttgatagactctcgtctagatgtactaattgatgataatctgtgagaatacttttggtcaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="+" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="27953" stop="29977"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28253" g_stop="28349" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="97" r_length="97" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="28350" i_stop="29320" i_length="971">
            <donor d_prob="0.587" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29321" g_stop="29687" g_length="367"/>
          <reference_exon_boundary r_type="cDNA" r_start="98" r_stop="464" r_length="367" r_score="0.975"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="+" ref_id="SGN-E352869" ref_strand="+">
        <total_alignment_score>0.981</total_alignment_score>
        <cumulative_length_of_scored_exons>464</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E352869" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28253" e_stop="28349"/>
          <exon e_start="29321" e_stop="29687"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTAGCAAAATGTAGAAGTGAAGTTTGCGAGGCACTTGGAATATCTGAAGATCAATGTGAGCTGTCAATGGGCATGTCAGGCGACTTTGAACTTGCTGTGAGTGACCTGACTTGTCACTAAGCACATCAAATCATTAGTAAGCTTGGAAGGAACTTGTATAACATGAGTTCTCTGGGGAGCATGTGGTAGTCTGAGTGCACCAATTATACAATCACTCTTTATAAATTAAACCAAAGTATTAACTAGACATCTGACTCAGTTTTCATTACTGGTCTCTGTTGTTAGAATCTTCTTGAGTCTGATGTATAATGCTTTATCGCTGGACAATAAACTCGCCCAGCTCCCCGCCACACCCATGGGATTAAGACGCTCAGACTAGGATTGTAGTTTCACCCCTTAACAGCTTGTTACAATTCAAGGGTTAGTCTGTTTTTATCTTTTGATAAGGTAAAAGTCATGTGACCCGGTTTGAACATTGGAACCAACTAGTGATGCTTATGTTAGTTAGGGTAAGCTGCCCGCCTATATCATACTTCTTGGGGGTGTGGATCTTCCTGGACCCTGTGTGAATGCCGGCTGCCCTTCATATTTGCGCTATTCTCTATCAGTTTCCCATGTGTACTTGTTTTCTGTGGCTGATATTATATATCTGTAGGGTGGATTGTTGTTAAAAGTAGAATTTCGTTTGACGCTCTCAAAAAAGAAAAGAAAAATTTAGTATCACAAGTAGAATTTTATTTGATTAGTTGTTGATTCTTTTGGGAGATCTTATCAGTGATGCGCTGTTCCAACCTCCATCCTACCTCCAATCTGATGACTAGTACTGCAGTCACCCATCAACCTATGCTTGTAGCCTATGGCCCCCTTAATTATGTAAGATATTTTCTTTTAAGGAGTAGTCTAGGCTATTGTATCAGGTAAGCATATTTTATCCTTGTGTCCTGCTATATTCAATAAAAGAAACAAGCACACATTCGTGCTTGCTAGCCAGCATTGGTATTGAATTCTACATATGCTTCGTTTGACCTCATGTTCTGCTATACTTATAATGCTGTCTATTACTACAGGTTGAGATGGGCAGTACAAATGTTCGAGTTGGATCTACTATATTTGGTGCAAGGGAATATCCAACGAAGTAGTCATCGAACTAGGTTGATGAACCCAGTTTAGTGAAGAGAGCTTGAGCCAAACATGTACCTTAAGATTTTGCAGCTTCATGTCGGAATATGAGTGTTTGTACGATGCCACTATGGACCTCATTGGCTATGTGGCTACAATATCCTGTCTGTATTCTATCTATTATTACTGCTGAACATAGTCTTGACTCTTGAGCTGCGATCTCGATGTTCAATAGTATTTTGGGATTTGATAGACTCTCGTCTAGATGTACTAATTGATGATAATCTGTGAGAATACTTTTGGTCCGTGGATCTT</genome_strand>
        <mrna_strand>TTTAGCAAAATGTAGAAGTGAAGTTTGCGAGGCACTTGGAATATCTGAAGATCAATGTGAGCTGTCAATGGGCATGTCAGGCGACTTTGAACTTGCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGAGATGGGCAGTACAAATGTTCGAGTTGGATCTACTATATTTGGTGCAAGGGAATATCCAACGAAGTAGTCATCGAACTAGGTTGATGAACCCAGTTTAGTGAAGAGAGCTTGAGCCAAACATGTACCTTAAGATTTTGCAGCTTCATGTCGGAATATGAGTGTTTGTACGATGCCACTATGGACCTCATTGGCTATGTGGCTACAATATCCTGTCTGTATTCTATCTATTATTACTGCTGAACATAGTCTTGACTCTTGAGCTGCGATCTCGATGTTCAATAGTATTTTGGGATTTGATAGACTCTCGTCTAGATGTACTAATTGATGATAATCTGTGAGAATACTTTTGGTCAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E216072" ref_strand="+" ref_description="SGN-E216072 [cLEL-13-A10](-)">
      <seq>tacaaatgttcgagttggatctactatatttggtgcaagggaatatccaacgaagtagtcatcgaactaggttgatgaacccagtttagtgaagagagcttgagccaaacatgtaccttaagattttgcagcttcatgtcggaatatgagtgtttgtacgatgccactatggacctcattggctatgtggctacaatatcctgtctgtattctatctattattactgctgaacatagtcttgactcttgagctgcgatctcgatgttcaatagtattttgggatttgatagactctcgtctagatgtactaattgatgataatctgtgagaatactcttggccaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="+" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="29035" stop="29978"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29335" g_stop="29674" g_length="340"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="340" r_length="340" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="344" polyA_stop="358"/>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="+" ref_id="SGN-E216072" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>340</cumulative_length_of_scored_exons>
        <coverage percentage="0.950" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E216072" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29335" e_stop="29674"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TACAAATGTTCGAGTTGGATCTACTATATTTGGTGCAAGGGAATATCCAACGAAGTAGTCATCGAACTAGGTTGATGAACCCAGTTTAGTGAAGAGAGCTTGAGCCAAACATGTACCTTAAGATTTTGCAGCTTCATGTCGGAATATGAGTGTTTGTACGATGCCACTATGGACCTCATTGGCTATGTGGCTACAATATCCTGTCTGTATTCTATCTATTATTACTGCTGAACATAGTCTTGACTCTTGAGCTGCGATCTCGATGTTCAATAGTATTTTGGGATTTGATAGACTCTCGTCTAGATGTACTAATTGATGATAATCTGTGAGAATACTTTTG</genome_strand>
        <mrna_strand>TACAAATGTTCGAGTTGGATCTACTATATTTGGTGCAAGGGAATATCCAACGAAGTAGTCATCGAACTAGGTTGATGAACCCAGTTTAGTGAAGAGAGCTTGAGCCAAACATGTACCTTAAGATTTTGCAGCTTCATGTCGGAATATGAGTGTTTGTACGATGCCACTATGGACCTCATTGGCTATGTGGCTACAATATCCTGTCTGTATTCTATCTATTATTACTGCTGAACATAGTCTTGACTCTTGAGCTGCGATCTCGATGTTCAATAGTATTTTGGGATTTGATAGACTCTCGTCTAGATGTACTAATTGATGATAATCTGTGAGAATACTCTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E539047" ref_strand="+" ref_description="SGN-E539047 [TUS-58-J18](-)">
      <seq>cagtaagggaaaaaagaatattgtaagtcaagagtgccttctgctaagaagatgcatttgaatattgtgcgttggccgtgatgctgtgccgacttcctcagttggctcctctctcttggccccatcctttcttgcaaacttcagaagcagcacaactgcattccagatgaacactatgtgcagacattgttggcgatacatgggcttgaaggagaacttgaacgtagaacgataacctatacagagtggaatgaatctgtgacaaatatggagaaaaagggttggcatcccataacatttagctatgcagatgctgggcctgtccagatcaagagaataaaggatatccgcaatgtttactatgaaagcgagtccaggacagagtggtgtcggaataattttacgctagccccctgttttctgattgcaaggaaattctcaggaggggctgcaatgcgcctcttgagtgaaggaatagtttctccattcgacgcctcctctatgatgaatttgaccccatgatatattaattagtctctatttattagtttttatttgtcatatactttgatgagaggataagttgccaattataactggagtgtgtcacaacacctctagcttactgatttaggaaatatattcaaggaagctgatctaagtatggctcatgtaaaacagtactgtagatattttaaaagaatcccataaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="-" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="37191" stop="35132"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36891" g_stop="36757" g_length="135"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="135" r_length="135" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36756" i_stop="36629" i_length="128">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="36628" g_stop="36569" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="136" r_stop="195" r_length="60" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="36568" i_stop="36297" i_length="272">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="36296" g_stop="36150" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="196" r_stop="342" r_length="147" r_score="0.993"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="36149" i_stop="35803" i_length="347">
            <donor d_prob="0.976" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="35802" g_stop="35443" g_length="360"/>
          <reference_exon_boundary r_type="cDNA" r_start="343" r_stop="702" r_length="360" r_score="0.986"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="35442" i_stop="35274" i_length="169">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.607" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="35273" g_stop="35259" g_length="15"/>
          <reference_exon_boundary r_type="cDNA" r_start="703" r_stop="717" r_length="15" r_score="0.800"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="718" polyA_stop="750"/>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="-" ref_id="SGN-E539047" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>717</cumulative_length_of_scored_exons>
        <coverage percentage="0.956" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E539047" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36891" e_stop="36757"/>
          <exon e_start="36628" e_stop="36569"/>
          <exon e_start="36296" e_stop="36150"/>
          <exon e_start="35802" e_stop="35443"/>
          <exon e_start="35273" e_stop="35259"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGTAAGGGAAAAAAGAATATTGTAAGTCAAGAGTGCCTTCTGCTAAGAAGATGCATTTGAATATTGTGCGTTGGCCGTGATGCTGTGCCGACTTCCTCAGTTGGCTCCTCTCTCTTGGCCCCATCCTTTCTTGCGTCCGTGTTACTTTTGTCATTCCAAGAACCACCCCCACCCCCATCCCCACCCACCCCACCCCGTTATACAGACATAACTTCTCCTCTATTGATACTTGTTTCTTCTAACCTTGAAATAAACCTTGCAGAAACTTCAGAAGCAGCACAACTGCATTCCAGATGAACACTATGTGCAGACATTGTTGGCGGTAAGTATCAGGCATATTCTTCCCATCTTTAGGCTTCTTGTCTGTTCTCAGGACTCTGAACTTACCAGACTTATTTACCTAGGTTATGTTTATCTTTAGTCTTATTGTGTGTTCTCAGGACTCCGTACTACATCTTTCTTTAGGAAATCCATTCTTTTAGATAAGATACACAAAGTACTCATGCTTATAGATATATCAAGGATTTTTCTGTGTGGACTGCTTTTGAGAATTATTCTTCGGGACTAAGGTTCTAGATTTTAATTGGTTTACAGATACATGGGCTTGAAGGAGAACTTGAACGTAGAACGATAACCTATACAGAGTGGAATGAATCTGTGACAAATATGGAGAAAAAGGGTTGGCATCCCATAACATTTAGCTATGCAGATGCTGGGCCTGTACAGATCAAGAGAATAAAGGTGTGTATTTGGATATGTCTAATAATTTGTCATCTCTAGCTTTGGGCATTTGACGCTATGATCATATCTGGTTACAGTTTCATGTTGGCATAGTTTCAGCTTCTCTTTCTTTGACTTTGCTTTTTGGTTTCCTTGTTAACTTCCCCGCTGGTTTTCCTTCATTCCCTTTTTTGGTTTTCCTTCCCTGACTTCCATAGTTGTTTTCTTTCTTAAAATCTTTTGTTGGTTATTTATATAACTTCTCTAGTTGTTTTTGTGTCTTCAACTCTTCTGTTTGGTATTGCATTAAGATATATTGCCTACTGAACTGATTGCTTTGTAACTTGCTATCCTTACAATTTTTACAGGATATCCGCAATGTTTACTATGAAAGCGAGTACAGGACAGAGTGGTGTCGGAATAATTCTACGCTAGCCCCCTGTTTTCTGATTGCAAGGAAATTCTCAGGAGGGGCTGCAATGCGCCTCTTGAGTGAAGGAATAGTTTCTCCATTCGACGCCTCCTCTATGATGAATTTGACACCATGATATATTAATTAGTCTCTATTTATTAGTTTTTATTTGTCATATACTTTGATGAGAGGATAAGTTGCCAATTATAACTGGAGTGTGTCACAACACCTCTAGCTTACTGATTTAGGAAATATACACAAGGAAGCTGATCTAAGTATGGCTCATGTAAAACAGTACTGTAGATATTTTAAAAGAATCACATAACACTCTTGTGGTTATCTGTCTTAAAATGTTAGGAATTTTTTTTATTTCCTTTTTTTGGGTACATAGTGCATTATATTTCGAATTTGAGAAAACGAGGATTGTTGATTTGTGTTGTATACTTCATTTCCAGCTTCCACTATCTTGTGTTCTTTTCCCACAGATGCTATAAAAAAAG</genome_strand>
        <mrna_strand>CAGTAAGGGAAAAAAGAATATTGTAAGTCAAGAGTGCCTTCTGCTAAGAAGATGCATTTGAATATTGTGCGTTGGCCGTGATGCTGTGCCGACTTCCTCAGTTGGCTCCTCTCTCTTGGCCCCATCCTTTCTTGC................................................................................................................................AAACTTCAGAAGCAGCACAACTGCATTCCAGATGAACACTATGTGCAGACATTGTTGGCG................................................................................................................................................................................................................................................................................ATACATGGGCTTGAAGGAGAACTTGAACGTAGAACGATAACCTATACAGAGTGGAATGAATCTGTGACAAATATGGAGAAAAAGGGTTGGCATCCCATAACATTTAGCTATGCAGATGCTGGGCCTGTCCAGATCAAGAGAATAAAG...........................................................................................................................................................................................................................................................................................................................................................GATATCCGCAATGTTTACTATGAAAGCGAGTCCAGGACAGAGTGGTGTCGGAATAATTTTACGCTAGCCCCCTGTTTTCTGATTGCAAGGAAATTCTCAGGAGGGGCTGCAATGCGCCTCTTGAGTGAAGGAATAGTTTCTCCATTCGACGCCTCCTCTATGATGAATTTGACCCCATGATATATTAATTAGTCTCTATTTATTAGTTTTTATTTGTCATATACTTTGATGAGAGGATAAGTTGCCAATTATAACTGGAGTGTGTCACAACACCTCTAGCTTACTGATTTAGGAAATATATTCAAGGAAGCTGATCTAAGTATGGCTCATGTAAAACAGTACTGTAGATATTTTAAAAGA.........................................................................................................................................................................ATCCCATAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E539050" ref_strand="+" ref_description="SGN-E539050 [TUS-58-J18]">
      <seq>caacattggatgaatgaggtctgtttgtcttccagttttcttgataaaaaggatgtccgctacaacccaaggatgtcaccctatataccaatgagcaaatggcgaaaagggtcacagtggatcactttaatcaggaagcatgcagaagtggtggcagatgatgatgctgtgtttccagtcttcaagatgttctgcaagagacgtccagcgctggaagccagtaagggaaaaaagaatattgtaagtcaagagtgccttctgctaagaagatgcatttgaatattgtgcgttggccgtgatgctgtgccgacttcctcagttggctcctctctcttggccccatcctttcttgcaaacttcagaagcagcacaactgcattccagatgaacactatgtgcagacattgttggcgatacatgggcttgaaggagaacttgaacgtagaacgataacctatacagagtggaatgaatctgtgacaaatatggagaaaaagggttggcatcccataacatttagctatgcagatgctgggcctgtacagatcaagagaataaaggatatccgcaatgtttactatgaaagcgagtacaggacagagtggtgtcggaataattctacgctagccccctgttttctgattgcaaggaaattctcaggaggggctgcaatgcgcctcttgagtgaaggaatagtttctccattcgacgcctcctctatgatgaatttgacaccatgatatattaattagtctctatttattagtttttatttgtcatatactttgatgagaggataagttgccaattataactgga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="-" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="38945" stop="35244"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="38645" g_stop="38529" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="117" r_length="117" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="38528" i_stop="37314" i_length="1215">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.927" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="37313" g_stop="37233" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="118" r_stop="198" r_length="81" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="37232" i_stop="36912" i_length="321">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.973" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="36911" g_stop="36757" g_length="155"/>
          <reference_exon_boundary r_type="cDNA" r_start="199" r_stop="353" r_length="155" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="36756" i_stop="36629" i_length="128">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="36628" g_stop="36569" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="354" r_stop="413" r_length="60" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="36568" i_stop="36297" i_length="272">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="36296" g_stop="36150" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="414" r_stop="560" r_length="147" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="36149" i_stop="35803" i_length="347">
            <donor d_prob="0.976" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="35802" g_stop="35544" g_length="259"/>
          <reference_exon_boundary r_type="cDNA" r_start="561" r_stop="819" r_length="259" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="-" ref_id="SGN-E539050" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>819</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E539050" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="38645" e_stop="38529"/>
          <exon e_start="37313" e_stop="37233"/>
          <exon e_start="36911" e_stop="36757"/>
          <exon e_start="36628" e_stop="36569"/>
          <exon e_start="36296" e_stop="36150"/>
          <exon e_start="35802" e_stop="35544"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAACATTGGATGAATGAGGTCTGTTTGTCTTCCAGTTTTCTTGATAAAAAGGATGTCCGCTACAACCCAAGGATGTCACCCTATATACCAATGAGCAAATGGCGAAAAGGGTCACAGGTAATTGTCCCTCAGTCTGAATTATAAGCACATCTATGTCCCACCAAGCTCTACTATGAAATTCATTACTCTATCGTGATTAAAAAAACTAAATCCATTAACTTGTGTATTTTTCTGCTCTAGTGGAGTTGAATTTTCATTAATTTCTTGCTAAGCAAAATTCAAGGCATATGATAGGGTAGAGGGGTGTTGGCAAGCAGGGTGTGACAACTCTAGAAGCTTCGAAATGCTTGTTTTTTCAGATTAATCCAAAACCATGTTCAAAGATCAAAGGAAGGAGCACTTACCAGCTCCTTCAAATGGGAAAATGATGTACAGAAGTAAAAAGTAACTCAGAAACCAAAGAGGTCTGCAAAAAACTTGTGCTGATAACAACTAAAAGCACCTATAAACATGATCTAAAAGGAACCTATGTGCTTGAAACGTGTCAACCTATATAACTACTTAACAAAAATTGAAAGATATTATTCAGAAGGAAATTACACACCATCTTAATGATCTTTGTTGAACTTGTATCTGTGAATAAAAGAAATAATTCAATACGTGAAAATGTAGTCCATGAAATCTGTGAGTCCTTGCCGTCTTAAGCGTAGGGTTAGGCCTTATGGTCAATGAAGTGAATTGAGAACCATGAGGTATTGGGTTCGAATCCTAGCGGAGACAAAAACATTTAGCGATTTCTTCTCATTTGTCCAATCATTGGTGGACAGGGTTAGCAGGTACCCCATGGAATTAGTTGAGGTATGTGTGTTAGTTGACCCAAACACCATGAAAGTTTCTTGTTAGATCAAGACTGTGTTCTAAACATAAGATTTTAGCATGGCGGTCAATCAATGTGGGAAATATTGATTGATTTTTGCCCCCTAAAATGTCATTGTGACCTACTAATTTTAAAGGATAGTTGCTGAACTTCAATGAGAAGAACTATTTTTTTAATTGACGAAATTTATGTGTGCTCAAGTTATTGTTGCTCTTTAAACATCTTCTTTAGTTCCTGATCCAGAGTCATTTTTAGTTTCATCCAGCAGTTTTTTTCAACTTTTAAAGTTCATAGTTTCTCTATTCTATAAGCTAGATAGACTTGTTTTTTGAAGCTCAGATGTTTTTTAAAAAAATCGTAATATCTCAAATCAATAAAATATACTGCATGATCATATGCGTATGACACTGGTCCATATCTGCTTCTATGAGTTTTGACTTGACATTTTAGTCCAGTGGATCACTTTAATCAGGAAGCATGCAGAAGTGGTGGCAGATGATGATGCTGTGTTTCCAGTCTTCAAGATGTTCTGCAAGGTTCAATATCATATGCTCTTCCCTCTTTAAACTTCACATGTGTGTTTACATGGATAATGCTATAAGGTTAACGGCATGCTTAATAAAGCATTGGTGCTTCAGGTTTATAAAATTACTAGTGCTACTCAACAGCCTAAAAATCCCTTATTTACTAATGTATACATGATGATGGACATGTTTTTGTAGTTTAATGTCTTCCGTAGTTGGGTTACTGTCTGTTACATTTTCTAATTGGAACTGTTAAGTGTGGTTTTACACTGATGCATCATACCTCTGCTTCATTTAGGTGATAACTGATAGAGTCATGATTTAATCTTGCAGAGACGTCCAGCGCTGGAAGCCAGTAAGGGAAAAAAGAATATTGTAAGTCAAGAGTGCCTTCTGCTAAGAAGATGCATTTGAATATTGTGCGTTGGCCGTGATGCTGTGCCGACTTCCTCAGTTGGCTCCTCTCTCTTGGCCCCATCCTTTCTTGCGTCCGTGTTACTTTTGTCATTCCAAGAACCACCCCCACCCCCATCCCCACCCACCCCACCCCGTTATACAGACATAACTTCTCCTCTATTGATACTTGTTTCTTCTAACCTTGAAATAAACCTTGCAGAAACTTCAGAAGCAGCACAACTGCATTCCAGATGAACACTATGTGCAGACATTGTTGGCGGTAAGTATCAGGCATATTCTTCCCATCTTTAGGCTTCTTGTCTGTTCTCAGGACTCTGAACTTACCAGACTTATTTACCTAGGTTATGTTTATCTTTAGTCTTATTGTGTGTTCTCAGGACTCCGTACTACATCTTTCTTTAGGAAATCCATTCTTTTAGATAAGATACACAAAGTACTCATGCTTATAGATATATCAAGGATTTTTCTGTGTGGACTGCTTTTGAGAATTATTCTTCGGGACTAAGGTTCTAGATTTTAATTGGTTTACAGATACATGGGCTTGAAGGAGAACTTGAACGTAGAACGATAACCTATACAGAGTGGAATGAATCTGTGACAAATATGGAGAAAAAGGGTTGGCATCCCATAACATTTAGCTATGCAGATGCTGGGCCTGTACAGATCAAGAGAATAAAGGTGTGTATTTGGATATGTCTAATAATTTGTCATCTCTAGCTTTGGGCATTTGACGCTATGATCATATCTGGTTACAGTTTCATGTTGGCATAGTTTCAGCTTCTCTTTCTTTGACTTTGCTTTTTGGTTTCCTTGTTAACTTCCCCGCTGGTTTTCCTTCATTCCCTTTTTTGGTTTTCCTTCCCTGACTTCCATAGTTGTTTTCTTTCTTAAAATCTTTTGTTGGTTATTTATATAACTTCTCTAGTTGTTTTTGTGTCTTCAACTCTTCTGTTTGGTATTGCATTAAGATATATTGCCTACTGAACTGATTGCTTTGTAACTTGCTATCCTTACAATTTTTACAGGATATCCGCAATGTTTACTATGAAAGCGAGTACAGGACAGAGTGGTGTCGGAATAATTCTACGCTAGCCCCCTGTTTTCTGATTGCAAGGAAATTCTCAGGAGGGGCTGCAATGCGCCTCTTGAGTGAAGGAATAGTTTCTCCATTCGACGCCTCCTCTATGATGAATTTGACACCATGATATATTAATTAGTCTCTATTTATTAGTTTTTATTTGTCATATACTTTGATGAGAGGATAAGTTGCCAATTATAACTGGA</genome_strand>
        <mrna_strand>CAACATTGGATGAATGAGGTCTGTTTGTCTTCCAGTTTTCTTGATAAAAAGGATGTCCGCTACAACCCAAGGATGTCACCCTATATACCAATGAGCAAATGGCGAAAAGGGTCACAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGATCACTTTAATCAGGAAGCATGCAGAAGTGGTGGCAGATGATGATGCTGTGTTTCCAGTCTTCAAGATGTTCTGCAAG.................................................................................................................................................................................................................................................................................................................................AGACGTCCAGCGCTGGAAGCCAGTAAGGGAAAAAAGAATATTGTAAGTCAAGAGTGCCTTCTGCTAAGAAGATGCATTTGAATATTGTGCGTTGGCCGTGATGCTGTGCCGACTTCCTCAGTTGGCTCCTCTCTCTTGGCCCCATCCTTTCTTGC................................................................................................................................AAACTTCAGAAGCAGCACAACTGCATTCCAGATGAACACTATGTGCAGACATTGTTGGCG................................................................................................................................................................................................................................................................................ATACATGGGCTTGAAGGAGAACTTGAACGTAGAACGATAACCTATACAGAGTGGAATGAATCTGTGACAAATATGGAGAAAAAGGGTTGGCATCCCATAACATTTAGCTATGCAGATGCTGGGCCTGTACAGATCAAGAGAATAAAG...........................................................................................................................................................................................................................................................................................................................................................GATATCCGCAATGTTTACTATGAAAGCGAGTACAGGACAGAGTGGTGTCGGAATAATTCTACGCTAGCCCCCTGTTTTCTGATTGCAAGGAAATTCTCAGGAGGGGCTGCAATGCGCCTCTTGAGTGAAGGAATAGTTTCTCCATTCGACGCCTCCTCTATGATGAATTTGACACCATGATATATTAATTAGTCTCTATTTATTAGTTTTTATTTGTCATATACTTTGATGAGAGGATAAGTTGCCAATTATAACTGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E279639" ref_strand="+" ref_description="SGN-E279639 [cLER-5-O13]">
      <seq>aacattggatgaatgaggtctgtttgtcttccagttttcttgataaaaaggatgtccgctacaacccaaggatgtcaccctatataccaatgagcaaatggcgaaaagggtcacagtggatcactttaatcaggaagcatgcagaagtggtggcagatgatgatgctgtgtttccagtcttcaagatgttctgcaagagacgtccagcgctggaagccagtaagggaaaaaagaatattgtaagtcaagagtgccttctgctaagaagatgcatttgaatattgtgcgttggccgtgatgctgtgccgacttcctcagatggctcctctctcttggccccatcctttcttgcaaacttcagaagcagcacaactgcattccagatgaacactatgtgcagacattgttggcgatacatgggcttgaaggagaacttgaacgtagaacgataacctatacagagtggaatgaatctgtgacaaatatggagaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="-" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="38944" stop="35914"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="38644" g_stop="38529" g_length="116"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="116" r_length="116" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="38528" i_stop="37314" i_length="1215">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.927" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="37313" g_stop="37233" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="117" r_stop="197" r_length="81" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="37232" i_stop="36912" i_length="321">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.973" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="36911" g_stop="36757" g_length="155"/>
          <reference_exon_boundary r_type="cDNA" r_start="198" r_stop="352" r_length="155" r_score="0.994"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="36756" i_stop="36629" i_length="128">
            <donor d_prob="0.000" d_score="0.98"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="36628" g_stop="36569" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="353" r_stop="412" r_length="60" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="36568" i_stop="36297" i_length="272">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="36296" g_stop="36214" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="413" r_stop="495" r_length="83" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="-" ref_id="SGN-E279639" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>495</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E279639" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="38644" e_stop="38529"/>
          <exon e_start="37313" e_stop="37233"/>
          <exon e_start="36911" e_stop="36757"/>
          <exon e_start="36628" e_stop="36569"/>
          <exon e_start="36296" e_stop="36214"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACATTGGATGAATGAGGTCTGTTTGTCTTCCAGTTTTCTTGATAAAAAGGATGTCCGCTACAACCCAAGGATGTCACCCTATATACCAATGAGCAAATGGCGAAAAGGGTCACAGGTAATTGTCCCTCAGTCTGAATTATAAGCACATCTATGTCCCACCAAGCTCTACTATGAAATTCATTACTCTATCGTGATTAAAAAAACTAAATCCATTAACTTGTGTATTTTTCTGCTCTAGTGGAGTTGAATTTTCATTAATTTCTTGCTAAGCAAAATTCAAGGCATATGATAGGGTAGAGGGGTGTTGGCAAGCAGGGTGTGACAACTCTAGAAGCTTCGAAATGCTTGTTTTTTCAGATTAATCCAAAACCATGTTCAAAGATCAAAGGAAGGAGCACTTACCAGCTCCTTCAAATGGGAAAATGATGTACAGAAGTAAAAAGTAACTCAGAAACCAAAGAGGTCTGCAAAAAACTTGTGCTGATAACAACTAAAAGCACCTATAAACATGATCTAAAAGGAACCTATGTGCTTGAAACGTGTCAACCTATATAACTACTTAACAAAAATTGAAAGATATTATTCAGAAGGAAATTACACACCATCTTAATGATCTTTGTTGAACTTGTATCTGTGAATAAAAGAAATAATTCAATACGTGAAAATGTAGTCCATGAAATCTGTGAGTCCTTGCCGTCTTAAGCGTAGGGTTAGGCCTTATGGTCAATGAAGTGAATTGAGAACCATGAGGTATTGGGTTCGAATCCTAGCGGAGACAAAAACATTTAGCGATTTCTTCTCATTTGTCCAATCATTGGTGGACAGGGTTAGCAGGTACCCCATGGAATTAGTTGAGGTATGTGTGTTAGTTGACCCAAACACCATGAAAGTTTCTTGTTAGATCAAGACTGTGTTCTAAACATAAGATTTTAGCATGGCGGTCAATCAATGTGGGAAATATTGATTGATTTTTGCCCCCTAAAATGTCATTGTGACCTACTAATTTTAAAGGATAGTTGCTGAACTTCAATGAGAAGAACTATTTTTTTAATTGACGAAATTTATGTGTGCTCAAGTTATTGTTGCTCTTTAAACATCTTCTTTAGTTCCTGATCCAGAGTCATTTTTAGTTTCATCCAGCAGTTTTTTTCAACTTTTAAAGTTCATAGTTTCTCTATTCTATAAGCTAGATAGACTTGTTTTTTGAAGCTCAGATGTTTTTTAAAAAAATCGTAATATCTCAAATCAATAAAATATACTGCATGATCATATGCGTATGACACTGGTCCATATCTGCTTCTATGAGTTTTGACTTGACATTTTAGTCCAGTGGATCACTTTAATCAGGAAGCATGCAGAAGTGGTGGCAGATGATGATGCTGTGTTTCCAGTCTTCAAGATGTTCTGCAAGGTTCAATATCATATGCTCTTCCCTCTTTAAACTTCACATGTGTGTTTACATGGATAATGCTATAAGGTTAACGGCATGCTTAATAAAGCATTGGTGCTTCAGGTTTATAAAATTACTAGTGCTACTCAACAGCCTAAAAATCCCTTATTTACTAATGTATACATGATGATGGACATGTTTTTGTAGTTTAATGTCTTCCGTAGTTGGGTTACTGTCTGTTACATTTTCTAATTGGAACTGTTAAGTGTGGTTTTACACTGATGCATCATACCTCTGCTTCATTTAGGTGATAACTGATAGAGTCATGATTTAATCTTGCAGAGACGTCCAGCGCTGGAAGCCAGTAAGGGAAAAAAGAATATTGTAAGTCAAGAGTGCCTTCTGCTAAGAAGATGCATTTGAATATTGTGCGTTGGCCGTGATGCTGTGCCGACTTCCTCAGTTGGCTCCTCTCTCTTGGCCCCATCCTTTCTTGCGTCCGTGTTACTTTTGTCATTCCAAGAACCACCCCCACCCCCATCCCCACCCACCCCACCCCGTTATACAGACATAACTTCTCCTCTATTGATACTTGTTTCTTCTAACCTTGAAATAAACCTTGCAGAAACTTCAGAAGCAGCACAACTGCATTCCAGATGAACACTATGTGCAGACATTGTTGGCGGTAAGTATCAGGCATATTCTTCCCATCTTTAGGCTTCTTGTCTGTTCTCAGGACTCTGAACTTACCAGACTTATTTACCTAGGTTATGTTTATCTTTAGTCTTATTGTGTGTTCTCAGGACTCCGTACTACATCTTTCTTTAGGAAATCCATTCTTTTAGATAAGATACACAAAGTACTCATGCTTATAGATATATCAAGGATTTTTCTGTGTGGACTGCTTTTGAGAATTATTCTTCGGGACTAAGGTTCTAGATTTTAATTGGTTTACAGATACATGGGCTTGAAGGAGAACTTGAACGTAGAACGATAACCTATACAGAGTGGAATGAATCTGTGACAAATATGGAGAAAAA</genome_strand>
        <mrna_strand>AACATTGGATGAATGAGGTCTGTTTGTCTTCCAGTTTTCTTGATAAAAAGGATGTCCGCTACAACCCAAGGATGTCACCCTATATACCAATGAGCAAATGGCGAAAAGGGTCACAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGATCACTTTAATCAGGAAGCATGCAGAAGTGGTGGCAGATGATGATGCTGTGTTTCCAGTCTTCAAGATGTTCTGCAAG.................................................................................................................................................................................................................................................................................................................................AGACGTCCAGCGCTGGAAGCCAGTAAGGGAAAAAAGAATATTGTAAGTCAAGAGTGCCTTCTGCTAAGAAGATGCATTTGAATATTGTGCGTTGGCCGTGATGCTGTGCCGACTTCCTCAGATGGCTCCTCTCTCTTGGCCCCATCCTTTCTTGC................................................................................................................................AAACTTCAGAAGCAGCACAACTGCATTCCAGATGAACACTATGTGCAGACATTGTTGGCG................................................................................................................................................................................................................................................................................ATACATGGGCTTGAAGGAGAACTTGAACGTAGAACGATAACCTATACAGAGTGGAATGAATCTGTGACAAATATGGAGAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E719553" ref_strand="+" ref_description="SGN-E719553 [FC08AH01]">
      <seq>cggccgaattggaaagatagagtgcaaccctcttttttcttttaaattttcaggagaaggagcaaagagaattcaaacctatgaagaagaagtcggcggcggcgatggctatggcggcgaccgccggaatgtctgtcagaaacgtgttgtggttgtggtggaagttgttggttctggtttctcttactatttgtgtgttggcttttctaaagcttcaaaactactctctttccgattcggaactttcctcttctacttcttcaatttccagtagatctcgagctctttattatactggcaatcccaaagttgcgttcctctttctagtgcggaggaatttgcctctcgatttcctttggggaaatttctttgagaatgctgaccctggcaatttttccatatatgtacattcggagcctggttttgtttttgatgagtctacaacaagatcaactttcttttataatcgccaattgacaaatagcatcaaggtagcttggggagaatcaagtatgatccacgcagaaaaattattacttggcgcggcacttgatgatccagcaaatcaaagatttgttctcttgtcggacagctgtgtcccactgtacaactttagcttcatatacaactacttgatggcttctccaaggagctttgtggacagttttcttgataaaaaggatgtccgctacaacccaaggatgtcaccctatataccaatgagcaaatggcgaaaagggtcacagtggatcactttaatcaggaagcatgcagaagtggtggcagatgatgatgctgtgtttccagtcttcaagatgttctgcaagagacgtccagcgctggaagccagtaagggaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="-" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="41701" stop="36578"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="41404" g_stop="41039" g_length="366"/>
          <reference_exon_boundary r_type="cDNA" r_start="10" r_stop="374" r_length="365" r_score="0.989"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="41038" i_stop="40767" i_length="272">
            <donor d_prob="0.981" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="40766" g_stop="40650" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="375" r_stop="491" r_length="117" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="40649" i_stop="39948" i_length="702">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.156" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="39947" g_stop="39847" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="492" r_stop="592" r_length="101" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="39846" i_stop="38891" i_length="956">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="38890" g_stop="38819" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="593" r_stop="664" r_length="72" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="38818" i_stop="38611" i_length="208">
            <donor d_prob="0.880" d_score="1.00"/>
            <acceptor a_prob="0.920" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="38610" g_stop="38529" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="665" r_stop="746" r_length="82" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="38528" i_stop="37314" i_length="1215">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.927" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="37313" g_stop="37233" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="747" r_stop="827" r_length="81" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="37232" i_stop="36912" i_length="321">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.973" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="36911" g_stop="36878" g_length="34"/>
          <reference_exon_boundary r_type="cDNA" r_start="828" r_stop="861" r_length="34" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="-" ref_id="SGN-E719553" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>853</cumulative_length_of_scored_exons>
        <coverage percentage="0.991" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E719553" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="41404" e_stop="41039"/>
          <exon e_start="40766" e_stop="40650"/>
          <exon e_start="39947" e_stop="39847"/>
          <exon e_start="38890" e_stop="38819"/>
          <exon e_start="38610" e_stop="38529"/>
          <exon e_start="37313" e_stop="37233"/>
          <exon e_start="36911" e_stop="36878"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAGAAAGATAGAGTGCAAATCTCTTTTTTCTTTTAAATTTTCAGGAGAAGGAGCAAAGAGAATTCAAACCTATGAAGAAGAAGTCGGCGGCGGCGATGGCTATGGCGGCGACCGCCGGAATGTCTGTCAGAAACGTGTTGTGGTTGTGGTGGAAGTTGTTGGTTCTGGTTTCTCTTACTATTTGTGTGTTGGCTTTTCTAAAGCTTCAAAACTACTCTCTTTCCGATTCGGAACTTTCCTCTTCTACTTCTTCAATTTCCAGTAGATCTCGAGCTCTTTATTATACTGGCAATCCCAAAGTTGCGTTCCTCTTTCTAGTGCGGAGGAATTTGCCTCTCGATTTCCTTTGGGGAAATTTCTTTGAGGTTAGTTGATTTTAAATTTTTCAGAGCAAAAATTCATCAAATTTAGGATCAAAATAGCTCTTTGTCCTCCCTTTATTCTCTTTTGTGATGATTGAACTCTTCTTGCAGCTTCAAAATGTGTAACTGTGCATATTTTTTGGGAATAGTAGTGAAATTTCCATCTTTCTTAAATTTGCTAGACACAATGGAAATGTGAAAGTTTTTTGGTTGCACAGATATTCCCTGTTTCAAAACCTGAATATTTGATATCATTATCTGTTTGGTGTTTGCAGAATGCTGACCCTGGCAATTTTTCCATATATGTACATTCGGAGCCTGGTTTTGTTTTTGATGAGTCTACAACAAGATCAACTTTCTTTTATAATCGCCAATTGACAAATAGCATCAAGGTAAGTGGTTTACTTCCCTATATGTGTTGCACATTGTAATACAAAATTTTTCTTTTTTGTATCTTTATTGTTTTTTTTTTTCTGGGTGATTGAAGTAATTTCATTTTTGCAGTGACATGAGCGTTTAATTCAATAAATTCATTTTATTCTTTTTCTTTTGTCCTTTTGATCAGTCTATTTGTGTTTATTGCTCTTGAATATTATCAGGAAATGTATCTGATTGAACTATTATGTAAAGATTTCGTAGGTTGCATGTAATATCCTCCAATAAGTTGGAGATTAGATTCTAAACCTTAAACTTATATATTATTATTGCACCAACCTATAGCGATGTTTGGTATATGGTAAATCAATCACTCTAATTGGTAGGACTCTTTCTGTTTTGGGCGTACCAAATTGATCGACAATGTTCCCAGTATTCCATTTGTAATATTATTTTGTAAACTTTCACAACTTTTAAGGATTTAAAAACTTTATATTTTTTAAGTTCTAAACTATGAAGTGATTTTTCCTGTATCAGATACTATCAATTGGACTACCACTACTTTAATATCTGTATCCACTACCATCAATACAAGATTTAAAGTCAATTTGACATTTTAAAAGCGGTCTCATAAAAAAATGTAGTAATTCATTTACTTCTGTTTGCTCTTTTTATAACTTTCATCTCTTTACCAGAACGATACTAAGAGTTACCTGTAGGTAGCTTGGGGAGAATCAAGTATGATCCACGCAGAAAAATTATTACTTGGCGCGGCACTTGATGATCCAGCAAATCAAAGATTTGTTCTCTTGTCGGACAGGTAGACTTTTTAATTCAAAAACATCTCAACACATCTCTCAGATAAGTCTGTCTAGGCGGCTTGTTAATGTGCATGCACGTTCCTTATTGATGCATGGCATTCTCAACTATTGGTTTTCACGAACTATCTTTTTATGCTTTCGTTTTCCTCATGACCCTGATTTACTTGATTCTTTCCCATAAATGGAGAAGTCCAGCATCTTTCAAAGCACCCCTTCATATATTTTGAAGTTCCTTTGATGATCAAACTATTTAGACACATTTCTTTGGAGTACCTATCTAACTAAGATCGAATCTCTTATTAGCCATCTCAAGCTTAATAACCTATTCACACCTTTTGTTTTGTAAATTTACACACAGCTCAAACCGTGTGATCTGAATTGCGTTTGAGGGAATACTTGCATTAGATATCAAGACTCCGGTATAGCTGTAATATTTTTGATTCTTATTATTGAAGAAGAAGCAGTCATACAACATTTTTTAGACATGCTTAGCACCAATGCTAATTACTATCATTACTATATTGAATAGACATGGATATGGTAGGAAGTGAATTCACACTGGAATTATTGAATGGACAGCACAATCATATTCTTGCTTGGTAAATGGTCATAGTACATTTATAAGACAATACAAATTTCGTATCCAAAAAGGGGAAAAAAGAAAAGAAAAAGAAAACAAATGCATATTCAGAACTTTCTGGCGCACATACAGTCCATGCTAAATAACTTAAAAATCGTCCAGTATGCAGTTGCACTAGAGACTAAGTACCTAGAAAAAATTATCTTCTTGACTTCTCGTTAATGAATCATGAGAAAACATACTTCAAAAATGTAGTGTGTTCCAATTCTTTTATCCATGTATTTCCCTTCTGTTTGTTTCACCCAATTATTGAGTTATGCTTTGTGCCTTTGTTTTAAGAATTTTTCTCTAAATGTGTGATGGTTGATATTGCAGCTGTGTCCCACTGTACAACTTTAGCTTCATATACAACTACTTGATGGCTTCTCCAAGGAGCTTTGTGGACAGGTAACATGGATGATAAAACTTGTGAGTTGTGTGATTGCTGGACAGGTGGTTGATTTTGTGGAACTGGTAGGGAAGGATAGATATAGAAAAAGCAATCAATTCCTTAAGTGGGTTCAGGATTTAAGGATCTGGTTGAATTACTAATGAATTATTTCGAATTCTCGTATTTGCATCAACATTGGATGAATGAGGTCTGTTTGTCTTCCAGTTTTCTTGATAAAAAGGATGTCCGCTACAACCCAAGGATGTCACCCTATATACCAATGAGCAAATGGCGAAAAGGGTCACAGGTAATTGTCCCTCAGTCTGAATTATAAGCACATCTATGTCCCACCAAGCTCTACTATGAAATTCATTACTCTATCGTGATTAAAAAAACTAAATCCATTAACTTGTGTATTTTTCTGCTCTAGTGGAGTTGAATTTTCATTAATTTCTTGCTAAGCAAAATTCAAGGCATATGATAGGGTAGAGGGGTGTTGGCAAGCAGGGTGTGACAACTCTAGAAGCTTCGAAATGCTTGTTTTTTCAGATTAATCCAAAACCATGTTCAAAGATCAAAGGAAGGAGCACTTACCAGCTCCTTCAAATGGGAAAATGATGTACAGAAGTAAAAAGTAACTCAGAAACCAAAGAGGTCTGCAAAAAACTTGTGCTGATAACAACTAAAAGCACCTATAAACATGATCTAAAAGGAACCTATGTGCTTGAAACGTGTCAACCTATATAACTACTTAACAAAAATTGAAAGATATTATTCAGAAGGAAATTACACACCATCTTAATGATCTTTGTTGAACTTGTATCTGTGAATAAAAGAAATAATTCAATACGTGAAAATGTAGTCCATGAAATCTGTGAGTCCTTGCCGTCTTAAGCGTAGGGTTAGGCCTTATGGTCAATGAAGTGAATTGAGAACCATGAGGTATTGGGTTCGAATCCTAGCGGAGACAAAAACATTTAGCGATTTCTTCTCATTTGTCCAATCATTGGTGGACAGGGTTAGCAGGTACCCCATGGAATTAGTTGAGGTATGTGTGTTAGTTGACCCAAACACCATGAAAGTTTCTTGTTAGATCAAGACTGTGTTCTAAACATAAGATTTTAGCATGGCGGTCAATCAATGTGGGAAATATTGATTGATTTTTGCCCCCTAAAATGTCATTGTGACCTACTAATTTTAAAGGATAGTTGCTGAACTTCAATGAGAAGAACTATTTTTTTAATTGACGAAATTTATGTGTGCTCAAGTTATTGTTGCTCTTTAAACATCTTCTTTAGTTCCTGATCCAGAGTCATTTTTAGTTTCATCCAGCAGTTTTTTTCAACTTTTAAAGTTCATAGTTTCTCTATTCTATAAGCTAGATAGACTTGTTTTTTGAAGCTCAGATGTTTTTTAAAAAAATCGTAATATCTCAAATCAATAAAATATACTGCATGATCATATGCGTATGACACTGGTCCATATCTGCTTCTATGAGTTTTGACTTGACATTTTAGTCCAGTGGATCACTTTAATCAGGAAGCATGCAGAAGTGGTGGCAGATGATGATGCTGTGTTTCCAGTCTTCAAGATGTTCTGCAAGGTTCAATATCATATGCTCTTCCCTCTTTAAACTTCACATGTGTGTTTACATGGATAATGCTATAAGGTTAACGGCATGCTTAATAAAGCATTGGTGCTTCAGGTTTATAAAATTACTAGTGCTACTCAACAGCCTAAAAATCCCTTATTTACTAATGTATACATGATGATGGACATGTTTTTGTAGTTTAATGTCTTCCGTAGTTGGGTTACTGTCTGTTACATTTTCTAATTGGAACTGTTAAGTGTGGTTTTACACTGATGCATCATACCTCTGCTTCATTTAGGTGATAACTGATAGAGTCATGATTTAATCTTGCAGAGACGTCCAGCGCTGGAAGCCAGTAAGGGAAAAA</genome_strand>
        <mrna_strand>TG-GAAAGATAGAGTGCAACCCTCTTTTTTCTTTTAAATTTTCAGGAGAAGGAGCAAAGAGAATTCAAACCTATGAAGAAGAAGTCGGCGGCGGCGATGGCTATGGCGGCGACCGCCGGAATGTCTGTCAGAAACGTGTTGTGGTTGTGGTGGAAGTTGTTGGTTCTGGTTTCTCTTACTATTTGTGTGTTGGCTTTTCTAAAGCTTCAAAACTACTCTCTTTCCGATTCGGAACTTTCCTCTTCTACTTCTTCAATTTCCAGTAGATCTCGAGCTCTTTATTATACTGGCAATCCCAAAGTTGCGTTCCTCTTTCTAGTGCGGAGGAATTTGCCTCTCGATTTCCTTTGGGGAAATTTCTTTGAG................................................................................................................................................................................................................................................................................AATGCTGACCCTGGCAATTTTTCCATATATGTACATTCGGAGCCTGGTTTTGTTTTTGATGAGTCTACAACAAGATCAACTTTCTTTTATAATCGCCAATTGACAAATAGCATCAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAGCTTGGGGAGAATCAAGTATGATCCACGCAGAAAAATTATTACTTGGCGCGGCACTTGATGATCCAGCAAATCAAAGATTTGTTCTCTTGTCGGACAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTGTCCCACTGTACAACTTTAGCTTCATATACAACTACTTGATGGCTTCTCCAAGGAGCTTTGTGGACAG................................................................................................................................................................................................................TTTTCTTGATAAAAAGGATGTCCGCTACAACCCAAGGATGTCACCCTATATACCAATGAGCAAATGGCGAAAAGGGTCACAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGATCACTTTAATCAGGAAGCATGCAGAAGTGGTGGCAGATGATGATGCTGTGTTTCCAGTCTTCAAGATGTTCTGCAAG.................................................................................................................................................................................................................................................................................................................................AGACGTCCAGCGCTGGAAGCCAGTAAGGGAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E702392" ref_strand="+" ref_description="SGN-E702392 [FA18CD06]">
      <seq>tctctctctcattcgctcccttcaaccgccacctgttcaatgtaaagacacacatatatatgtgcatttatttatacacagagagaaagatagagtgcaaatctcttttttcttttaaattttcaggagaaggagcaaagagaattcaaacctatgaagaagaagtcggcggcggcgatggctatggcggcgaccgccggaatgtctgtcagaaacgtgttgtggttgtggtggaagttgttggttctggtttctcttactatttgtgtgttggcttttctaaagcttcaaaactactctctttccgattcggaactttcctcttctacttcttcaatttccagtagatctcgagctctttattatactggcaatcccaaagttgcgttcctctttctagtgcggaggaatttgcctctcgatttcctttggggaaatttctttgagaatgctgaccctggcaatttttccatatatgtacattcggagcctggttttgtttttgatgagtctacaacaagatcaactttcttttataatcgccaattgacaaatagcatcaaggtagcttggggagaatcaagtatgatccacgcagaaaaattattacttggcgcggcacttgatgatccagcaaatcaaagatttgttctcttgtcggacagctgtgtcccactgtacaactttagcttcatatacaactacttgatggcttctccaaggagctttgtggacagttttcttgataaaaaggatgtccgctacaacccaaggatgtcaccctatataccaatgaggcaatggcgaaaagggtcacagtggatcactttaatcaggaagcatgcaaaagtggtggcagatgatgatgctgtgtttccagtcttcaagatgttctgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="-" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="41785" stop="36936"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="41485" g_stop="41039" g_length="447"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="447" r_length="447" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="41038" i_stop="40767" i_length="272">
            <donor d_prob="0.981" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="40766" g_stop="40650" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="448" r_stop="564" r_length="117" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="40649" i_stop="39948" i_length="702">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.156" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="39947" g_stop="39847" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="565" r_stop="665" r_length="101" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="39846" i_stop="38891" i_length="956">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="38890" g_stop="38819" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="666" r_stop="737" r_length="72" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="38818" i_stop="38611" i_length="208">
            <donor d_prob="0.880" d_score="1.00"/>
            <acceptor a_prob="0.920" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="38610" g_stop="38529" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="738" r_stop="819" r_length="82" r_score="0.976"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="38528" i_stop="37314" i_length="1215">
            <donor d_prob="0.986" d_score="0.96"/>
            <acceptor a_prob="0.927" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="37313" g_stop="37236" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="820" r_stop="897" r_length="78" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="-" ref_id="SGN-E702392" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>897</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E702392" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="41485" e_stop="41039"/>
          <exon e_start="40766" e_stop="40650"/>
          <exon e_start="39947" e_stop="39847"/>
          <exon e_start="38890" e_stop="38819"/>
          <exon e_start="38610" e_stop="38529"/>
          <exon e_start="37313" e_stop="37236"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTCTCTCTCATTCGCTCCCTTCAACCGCCACCTGTTCAATGTAAAGACACACATATATATGTGCATTTATTTATACACAGAGAGAAAGATAGAGTGCAAATCTCTTTTTTCTTTTAAATTTTCAGGAGAAGGAGCAAAGAGAATTCAAACCTATGAAGAAGAAGTCGGCGGCGGCGATGGCTATGGCGGCGACCGCCGGAATGTCTGTCAGAAACGTGTTGTGGTTGTGGTGGAAGTTGTTGGTTCTGGTTTCTCTTACTATTTGTGTGTTGGCTTTTCTAAAGCTTCAAAACTACTCTCTTTCCGATTCGGAACTTTCCTCTTCTACTTCTTCAATTTCCAGTAGATCTCGAGCTCTTTATTATACTGGCAATCCCAAAGTTGCGTTCCTCTTTCTAGTGCGGAGGAATTTGCCTCTCGATTTCCTTTGGGGAAATTTCTTTGAGGTTAGTTGATTTTAAATTTTTCAGAGCAAAAATTCATCAAATTTAGGATCAAAATAGCTCTTTGTCCTCCCTTTATTCTCTTTTGTGATGATTGAACTCTTCTTGCAGCTTCAAAATGTGTAACTGTGCATATTTTTTGGGAATAGTAGTGAAATTTCCATCTTTCTTAAATTTGCTAGACACAATGGAAATGTGAAAGTTTTTTGGTTGCACAGATATTCCCTGTTTCAAAACCTGAATATTTGATATCATTATCTGTTTGGTGTTTGCAGAATGCTGACCCTGGCAATTTTTCCATATATGTACATTCGGAGCCTGGTTTTGTTTTTGATGAGTCTACAACAAGATCAACTTTCTTTTATAATCGCCAATTGACAAATAGCATCAAGGTAAGTGGTTTACTTCCCTATATGTGTTGCACATTGTAATACAAAATTTTTCTTTTTTGTATCTTTATTGTTTTTTTTTTTCTGGGTGATTGAAGTAATTTCATTTTTGCAGTGACATGAGCGTTTAATTCAATAAATTCATTTTATTCTTTTTCTTTTGTCCTTTTGATCAGTCTATTTGTGTTTATTGCTCTTGAATATTATCAGGAAATGTATCTGATTGAACTATTATGTAAAGATTTCGTAGGTTGCATGTAATATCCTCCAATAAGTTGGAGATTAGATTCTAAACCTTAAACTTATATATTATTATTGCACCAACCTATAGCGATGTTTGGTATATGGTAAATCAATCACTCTAATTGGTAGGACTCTTTCTGTTTTGGGCGTACCAAATTGATCGACAATGTTCCCAGTATTCCATTTGTAATATTATTTTGTAAACTTTCACAACTTTTAAGGATTTAAAAACTTTATATTTTTTAAGTTCTAAACTATGAAGTGATTTTTCCTGTATCAGATACTATCAATTGGACTACCACTACTTTAATATCTGTATCCACTACCATCAATACAAGATTTAAAGTCAATTTGACATTTTAAAAGCGGTCTCATAAAAAAATGTAGTAATTCATTTACTTCTGTTTGCTCTTTTTATAACTTTCATCTCTTTACCAGAACGATACTAAGAGTTACCTGTAGGTAGCTTGGGGAGAATCAAGTATGATCCACGCAGAAAAATTATTACTTGGCGCGGCACTTGATGATCCAGCAAATCAAAGATTTGTTCTCTTGTCGGACAGGTAGACTTTTTAATTCAAAAACATCTCAACACATCTCTCAGATAAGTCTGTCTAGGCGGCTTGTTAATGTGCATGCACGTTCCTTATTGATGCATGGCATTCTCAACTATTGGTTTTCACGAACTATCTTTTTATGCTTTCGTTTTCCTCATGACCCTGATTTACTTGATTCTTTCCCATAAATGGAGAAGTCCAGCATCTTTCAAAGCACCCCTTCATATATTTTGAAGTTCCTTTGATGATCAAACTATTTAGACACATTTCTTTGGAGTACCTATCTAACTAAGATCGAATCTCTTATTAGCCATCTCAAGCTTAATAACCTATTCACACCTTTTGTTTTGTAAATTTACACACAGCTCAAACCGTGTGATCTGAATTGCGTTTGAGGGAATACTTGCATTAGATATCAAGACTCCGGTATAGCTGTAATATTTTTGATTCTTATTATTGAAGAAGAAGCAGTCATACAACATTTTTTAGACATGCTTAGCACCAATGCTAATTACTATCATTACTATATTGAATAGACATGGATATGGTAGGAAGTGAATTCACACTGGAATTATTGAATGGACAGCACAATCATATTCTTGCTTGGTAAATGGTCATAGTACATTTATAAGACAATACAAATTTCGTATCCAAAAAGGGGAAAAAAGAAAAGAAAAAGAAAACAAATGCATATTCAGAACTTTCTGGCGCACATACAGTCCATGCTAAATAACTTAAAAATCGTCCAGTATGCAGTTGCACTAGAGACTAAGTACCTAGAAAAAATTATCTTCTTGACTTCTCGTTAATGAATCATGAGAAAACATACTTCAAAAATGTAGTGTGTTCCAATTCTTTTATCCATGTATTTCCCTTCTGTTTGTTTCACCCAATTATTGAGTTATGCTTTGTGCCTTTGTTTTAAGAATTTTTCTCTAAATGTGTGATGGTTGATATTGCAGCTGTGTCCCACTGTACAACTTTAGCTTCATATACAACTACTTGATGGCTTCTCCAAGGAGCTTTGTGGACAGGTAACATGGATGATAAAACTTGTGAGTTGTGTGATTGCTGGACAGGTGGTTGATTTTGTGGAACTGGTAGGGAAGGATAGATATAGAAAAAGCAATCAATTCCTTAAGTGGGTTCAGGATTTAAGGATCTGGTTGAATTACTAATGAATTATTTCGAATTCTCGTATTTGCATCAACATTGGATGAATGAGGTCTGTTTGTCTTCCAGTTTTCTTGATAAAAAGGATGTCCGCTACAACCCAAGGATGTCACCCTATATACCAATGAGCAAATGGCGAAAAGGGTCACAGGTAATTGTCCCTCAGTCTGAATTATAAGCACATCTATGTCCCACCAAGCTCTACTATGAAATTCATTACTCTATCGTGATTAAAAAAACTAAATCCATTAACTTGTGTATTTTTCTGCTCTAGTGGAGTTGAATTTTCATTAATTTCTTGCTAAGCAAAATTCAAGGCATATGATAGGGTAGAGGGGTGTTGGCAAGCAGGGTGTGACAACTCTAGAAGCTTCGAAATGCTTGTTTTTTCAGATTAATCCAAAACCATGTTCAAAGATCAAAGGAAGGAGCACTTACCAGCTCCTTCAAATGGGAAAATGATGTACAGAAGTAAAAAGTAACTCAGAAACCAAAGAGGTCTGCAAAAAACTTGTGCTGATAACAACTAAAAGCACCTATAAACATGATCTAAAAGGAACCTATGTGCTTGAAACGTGTCAACCTATATAACTACTTAACAAAAATTGAAAGATATTATTCAGAAGGAAATTACACACCATCTTAATGATCTTTGTTGAACTTGTATCTGTGAATAAAAGAAATAATTCAATACGTGAAAATGTAGTCCATGAAATCTGTGAGTCCTTGCCGTCTTAAGCGTAGGGTTAGGCCTTATGGTCAATGAAGTGAATTGAGAACCATGAGGTATTGGGTTCGAATCCTAGCGGAGACAAAAACATTTAGCGATTTCTTCTCATTTGTCCAATCATTGGTGGACAGGGTTAGCAGGTACCCCATGGAATTAGTTGAGGTATGTGTGTTAGTTGACCCAAACACCATGAAAGTTTCTTGTTAGATCAAGACTGTGTTCTAAACATAAGATTTTAGCATGGCGGTCAATCAATGTGGGAAATATTGATTGATTTTTGCCCCCTAAAATGTCATTGTGACCTACTAATTTTAAAGGATAGTTGCTGAACTTCAATGAGAAGAACTATTTTTTTAATTGACGAAATTTATGTGTGCTCAAGTTATTGTTGCTCTTTAAACATCTTCTTTAGTTCCTGATCCAGAGTCATTTTTAGTTTCATCCAGCAGTTTTTTTCAACTTTTAAAGTTCATAGTTTCTCTATTCTATAAGCTAGATAGACTTGTTTTTTGAAGCTCAGATGTTTTTTAAAAAAATCGTAATATCTCAAATCAATAAAATATACTGCATGATCATATGCGTATGACACTGGTCCATATCTGCTTCTATGAGTTTTGACTTGACATTTTAGTCCAGTGGATCACTTTAATCAGGAAGCATGCAGAAGTGGTGGCAGATGATGATGCTGTGTTTCCAGTCTTCAAGATGTTCTGC</genome_strand>
        <mrna_strand>TCTCTCTCTCATTCGCTCCCTTCAACCGCCACCTGTTCAATGTAAAGACACACATATATATGTGCATTTATTTATACACAGAGAGAAAGATAGAGTGCAAATCTCTTTTTTCTTTTAAATTTTCAGGAGAAGGAGCAAAGAGAATTCAAACCTATGAAGAAGAAGTCGGCGGCGGCGATGGCTATGGCGGCGACCGCCGGAATGTCTGTCAGAAACGTGTTGTGGTTGTGGTGGAAGTTGTTGGTTCTGGTTTCTCTTACTATTTGTGTGTTGGCTTTTCTAAAGCTTCAAAACTACTCTCTTTCCGATTCGGAACTTTCCTCTTCTACTTCTTCAATTTCCAGTAGATCTCGAGCTCTTTATTATACTGGCAATCCCAAAGTTGCGTTCCTCTTTCTAGTGCGGAGGAATTTGCCTCTCGATTTCCTTTGGGGAAATTTCTTTGAG................................................................................................................................................................................................................................................................................AATGCTGACCCTGGCAATTTTTCCATATATGTACATTCGGAGCCTGGTTTTGTTTTTGATGAGTCTACAACAAGATCAACTTTCTTTTATAATCGCCAATTGACAAATAGCATCAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAGCTTGGGGAGAATCAAGTATGATCCACGCAGAAAAATTATTACTTGGCGCGGCACTTGATGATCCAGCAAATCAAAGATTTGTTCTCTTGTCGGACAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTGTCCCACTGTACAACTTTAGCTTCATATACAACTACTTGATGGCTTCTCCAAGGAGCTTTGTGGACAG................................................................................................................................................................................................................TTTTCTTGATAAAAAGGATGTCCGCTACAACCCAAGGATGTCACCCTATATACCAATGAGGCAATGGCGAAAAGGGTCACAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGATCACTTTAATCAGGAAGCATGCAAAAGTGGTGGCAGATGATGATGCTGTGTTTCCAGTCTTCAAGATGTTCTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E248377" ref_strand="+" ref_description="SGN-E248377 [cLEG-1-K5]">
      <seq>gcggcggcgatggctatggcggcgagcgccggtatgtctgtcacaaacgtgttgtggttgtggtggaagttgttggttctggtttctcttactatttgtgtgttggcttttctaaagcttcaaaactactctctttccgattcggaactttcctcttctacttcttcaatttccagtagatctcgagctctttattatactggcaatcccaaagttgcgttcctctttctagtgcggaggaatttgcctctcgatttcctttggggaaatttctttgagaatgctgaccctggcaatttttccatatatgtacattcggagcctggttttgtttttgatgagtctacaacaagatcaactttcttttataatcgccaattgacaaatagcatcaaggtagcttggggagaatcaagtatgatccacgcagaaaaattattacttggcgcggcacttgatgatccagcaaatcaaagatttgttctcttgtcggacagctgtgtcccac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="-" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="41617" stop="39545"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="41317" g_stop="41039" g_length="279"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="279" r_length="279" r_score="0.989"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="41038" i_stop="40767" i_length="272">
            <donor d_prob="0.981" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="40766" g_stop="40650" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="280" r_stop="396" r_length="117" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="40649" i_stop="39948" i_length="702">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.156" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="39947" g_stop="39847" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="397" r_stop="497" r_length="101" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="-" ref_id="SGN-E248377" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>497</cumulative_length_of_scored_exons>
        <coverage percentage="0.978" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E248377" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="41317" e_stop="41039"/>
          <exon e_start="40766" e_stop="40650"/>
          <exon e_start="39947" e_stop="39847"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCGGCGGCGATGGCTATGGCGGCGACCGCCGGAATGTCTGTCAGAAACGTGTTGTGGTTGTGGTGGAAGTTGTTGGTTCTGGTTTCTCTTACTATTTGTGTGTTGGCTTTTCTAAAGCTTCAAAACTACTCTCTTTCCGATTCGGAACTTTCCTCTTCTACTTCTTCAATTTCCAGTAGATCTCGAGCTCTTTATTATACTGGCAATCCCAAAGTTGCGTTCCTCTTTCTAGTGCGGAGGAATTTGCCTCTCGATTTCCTTTGGGGAAATTTCTTTGAGGTTAGTTGATTTTAAATTTTTCAGAGCAAAAATTCATCAAATTTAGGATCAAAATAGCTCTTTGTCCTCCCTTTATTCTCTTTTGTGATGATTGAACTCTTCTTGCAGCTTCAAAATGTGTAACTGTGCATATTTTTTGGGAATAGTAGTGAAATTTCCATCTTTCTTAAATTTGCTAGACACAATGGAAATGTGAAAGTTTTTTGGTTGCACAGATATTCCCTGTTTCAAAACCTGAATATTTGATATCATTATCTGTTTGGTGTTTGCAGAATGCTGACCCTGGCAATTTTTCCATATATGTACATTCGGAGCCTGGTTTTGTTTTTGATGAGTCTACAACAAGATCAACTTTCTTTTATAATCGCCAATTGACAAATAGCATCAAGGTAAGTGGTTTACTTCCCTATATGTGTTGCACATTGTAATACAAAATTTTTCTTTTTTGTATCTTTATTGTTTTTTTTTTTCTGGGTGATTGAAGTAATTTCATTTTTGCAGTGACATGAGCGTTTAATTCAATAAATTCATTTTATTCTTTTTCTTTTGTCCTTTTGATCAGTCTATTTGTGTTTATTGCTCTTGAATATTATCAGGAAATGTATCTGATTGAACTATTATGTAAAGATTTCGTAGGTTGCATGTAATATCCTCCAATAAGTTGGAGATTAGATTCTAAACCTTAAACTTATATATTATTATTGCACCAACCTATAGCGATGTTTGGTATATGGTAAATCAATCACTCTAATTGGTAGGACTCTTTCTGTTTTGGGCGTACCAAATTGATCGACAATGTTCCCAGTATTCCATTTGTAATATTATTTTGTAAACTTTCACAACTTTTAAGGATTTAAAAACTTTATATTTTTTAAGTTCTAAACTATGAAGTGATTTTTCCTGTATCAGATACTATCAATTGGACTACCACTACTTTAATATCTGTATCCACTACCATCAATACAAGATTTAAAGTCAATTTGACATTTTAAAAGCGGTCTCATAAAAAAATGTAGTAATTCATTTACTTCTGTTTGCTCTTTTTATAACTTTCATCTCTTTACCAGAACGATACTAAGAGTTACCTGTAGGTAGCTTGGGGAGAATCAAGTATGATCCACGCAGAAAAATTATTACTTGGCGCGGCACTTGATGATCCAGCAAATCAAAGATTTGTTCTCTTGTCGGACAG</genome_strand>
        <mrna_strand>GCGGCGGCGATGGCTATGGCGGCGAGCGCCGGTATGTCTGTCACAAACGTGTTGTGGTTGTGGTGGAAGTTGTTGGTTCTGGTTTCTCTTACTATTTGTGTGTTGGCTTTTCTAAAGCTTCAAAACTACTCTCTTTCCGATTCGGAACTTTCCTCTTCTACTTCTTCAATTTCCAGTAGATCTCGAGCTCTTTATTATACTGGCAATCCCAAAGTTGCGTTCCTCTTTCTAGTGCGGAGGAATTTGCCTCTCGATTTCCTTTGGGGAAATTTCTTTGAG................................................................................................................................................................................................................................................................................AATGCTGACCCTGGCAATTTTTCCATATATGTACATTCGGAGCCTGGTTTTGTTTTTGATGAGTCTACAACAAGATCAACTTTCTTTTATAATCGCCAATTGACAAATAGCATCAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAGCTTGGGGAGAATCAAGTATGATCCACGCAGAAAAATTATTACTTGGCGCGGCACTTGATGATCCAGCAAATCAAAGATTTGTTCTCTTGTCGGACAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E418512" ref_strand="+" ref_description="SGN-E418512 [STM-27-P17]">
      <seq>cgccaaacgacgtcgttagcgtcttctccttccttgtctttgagacagttgtgcatcaaggaacagaacaaaaggcaaagcaccagcaagcagtgtgaaaccaaaaaaaaagcatttggtgtcgtctctgaaatgcttctctctctcattcgctcccttcaaccgccacctgttcaatgagaagaaggaagaaaaggagcaaagagaattcaaacctatgaagaagaagtcggcggcggcgatggctatggcggcgaccgccggaatgtctgtgagaaacgtgctgtggttgtggtggaagttgttggttctggtttctcttactctttgtgtgttggcttttctcaagctccaaaactactctctttccgattcggaactttcctcttctacttcttcaatttctagtagatctcgagctgttgattatactggcaatcccaaagttgctttcctctttctagtgcgtaggaatttgcctctcgatttcctttggggaaatttctttgagaatgctgacactggtaatttttccatatatgtacattcggagcctggttttgtttttgatgagtctacaacaagatcgactntcttttataatcgccaattgacaaatagcatcaaggtagcttggggagaatcaagtatgatccaagcagagaaattattacttggcgcagcacttgatgatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="-" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="41920" stop="39581"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="41624" g_stop="41433" g_length="192"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="190" r_length="190" r_score="0.917"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="41432" i_stop="41360" i_length="73">
            <donor d_prob="0.000" d_score="0.88"/>
            <acceptor a_prob="0.956" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="41359" g_stop="41039" g_length="321"/>
          <reference_exon_boundary r_type="cDNA" r_start="191" r_stop="511" r_length="321" r_score="0.966"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="41038" i_stop="40767" i_length="272">
            <donor d_prob="0.981" d_score="0.98"/>
            <acceptor a_prob="0.998" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="40766" g_stop="40650" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="512" r_stop="628" r_length="117" r_score="0.966"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="40649" i_stop="39948" i_length="702">
            <donor d_prob="0.999" d_score="0.96"/>
            <acceptor a_prob="0.156" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="39947" g_stop="39881" g_length="67"/>
          <reference_exon_boundary r_type="cDNA" r_start="629" r_stop="695" r_length="67" r_score="0.955"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="-" ref_id="SGN-E418512" ref_strand="+">
        <total_alignment_score>0.951</total_alignment_score>
        <cumulative_length_of_scored_exons>697</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E418512" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="41624" e_stop="41433"/>
          <exon e_start="41359" e_stop="41039"/>
          <exon e_start="40766" e_stop="40650"/>
          <exon e_start="39947" e_stop="39881"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGAAAACGACGTCGTTAGGTTCTTCCCCTTCCTTGTCTTTGAGACAGTTGTGCACCAAGGAACAGAACAAAAGGCAAAGCACCAGCAAGCAGTGTGAAACCAAAAAAAAAGAGCATTTGGTGTCGTCTCTGAAATGCTTCTCTCTCTCATTCGCTCCCTTCAACCGCCACCTGTTCAATGTAAAGACACACATATATATGTGCATTTATTTATACACAGAGAGAAAGATAGAGTGCAAATCTCTTTTTTCTTTTAAATTTTCAGGAGAAGGAGCAAAGAGAATTCAAACCTATGAAGAAGAAGTCGGCGGCGGCGATGGCTATGGCGGCGACCGCCGGAATGTCTGTCAGAAACGTGTTGTGGTTGTGGTGGAAGTTGTTGGTTCTGGTTTCTCTTACTATTTGTGTGTTGGCTTTTCTAAAGCTTCAAAACTACTCTCTTTCCGATTCGGAACTTTCCTCTTCTACTTCTTCAATTTCCAGTAGATCTCGAGCTCTTTATTATACTGGCAATCCCAAAGTTGCGTTCCTCTTTCTAGTGCGGAGGAATTTGCCTCTCGATTTCCTTTGGGGAAATTTCTTTGAGGTTAGTTGATTTTAAATTTTTCAGAGCAAAAATTCATCAAATTTAGGATCAAAATAGCTCTTTGTCCTCCCTTTATTCTCTTTTGTGATGATTGAACTCTTCTTGCAGCTTCAAAATGTGTAACTGTGCATATTTTTTGGGAATAGTAGTGAAATTTCCATCTTTCTTAAATTTGCTAGACACAATGGAAATGTGAAAGTTTTTTGGTTGCACAGATATTCCCTGTTTCAAAACCTGAATATTTGATATCATTATCTGTTTGGTGTTTGCAGAATGCTGACCCTGGCAATTTTTCCATATATGTACATTCGGAGCCTGGTTTTGTTTTTGATGAGTCTACAACAAGATCAACTTTCTTTTATAATCGCCAATTGACAAATAGCATCAAGGTAAGTGGTTTACTTCCCTATATGTGTTGCACATTGTAATACAAAATTTTTCTTTTTTGTATCTTTATTGTTTTTTTTTTTCTGGGTGATTGAAGTAATTTCATTTTTGCAGTGACATGAGCGTTTAATTCAATAAATTCATTTTATTCTTTTTCTTTTGTCCTTTTGATCAGTCTATTTGTGTTTATTGCTCTTGAATATTATCAGGAAATGTATCTGATTGAACTATTATGTAAAGATTTCGTAGGTTGCATGTAATATCCTCCAATAAGTTGGAGATTAGATTCTAAACCTTAAACTTATATATTATTATTGCACCAACCTATAGCGATGTTTGGTATATGGTAAATCAATCACTCTAATTGGTAGGACTCTTTCTGTTTTGGGCGTACCAAATTGATCGACAATGTTCCCAGTATTCCATTTGTAATATTATTTTGTAAACTTTCACAACTTTTAAGGATTTAAAAACTTTATATTTTTTAAGTTCTAAACTATGAAGTGATTTTTCCTGTATCAGATACTATCAATTGGACTACCACTACTTTAATATCTGTATCCACTACCATCAATACAAGATTTAAAGTCAATTTGACATTTTAAAAGCGGTCTCATAAAAAAATGTAGTAATTCATTTACTTCTGTTTGCTCTTTTTATAACTTTCATCTCTTTACCAGAACGATACTAAGAGTTACCTGTAGGTAGCTTGGGGAGAATCAAGTATGATCCACGCAGAAAAATTATTACTTGGCGCGGCACTTGATGATC</genome_strand>
        <mrna_strand>CGCCAAACGACGTCGTTAGCGTCTTCTCCTTCCTTGTCTTTGAGACAGTTGTGCATCAAGGAACAGAACAAAAGGCAAAGCACCAGCAAGCAGTGTGAAACC-AAAAAAAA-AGCATTTGGTGTCGTCTCTGAAATGCTTCTCTCTCTCATTCGCTCCCTTCAACCGCCACCTGTTCAATGAGAAGAAGGAA.........................................................................GAAAAGGAGCAAAGAGAATTCAAACCTATGAAGAAGAAGTCGGCGGCGGCGATGGCTATGGCGGCGACCGCCGGAATGTCTGTGAGAAACGTGCTGTGGTTGTGGTGGAAGTTGTTGGTTCTGGTTTCTCTTACTCTTTGTGTGTTGGCTTTTCTCAAGCTCCAAAACTACTCTCTTTCCGATTCGGAACTTTCCTCTTCTACTTCTTCAATTTCTAGTAGATCTCGAGCTGTTGATTATACTGGCAATCCCAAAGTTGCTTTCCTCTTTCTAGTGCGTAGGAATTTGCCTCTCGATTTCCTTTGGGGAAATTTCTTTGAG................................................................................................................................................................................................................................................................................AATGCTGACACTGGTAATTTTTCCATATATGTACATTCGGAGCCTGGTTTTGTTTTTGATGAGTCTACAACAAGATCGACTNTCTTTTATAATCGCCAATTGACAAATAGCATCAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAGCTTGGGGAGAATCAAGTATGATCCAAGCAGAGAAATTATTACTTGGCGCAGCACTTGATGATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E442163" ref_strand="+" ref_description="SGN-E442163 [cSTA-32-M9]">
      <seq>cgccaaacgacgtcgttagcgtcttctccttccttgtctttgagacagctgtgcatcaaggaacagaacaaaaggcaaagcaccagctagcagtgtgaaaccaaaaaaaaagcatttggtgtcgtctctgaaatgcttctctctctcattcgctcccttcaaccgccacctgttcaatgagaagaaggaagaaaaggagcaaagagaattcaaacctatgaagaagaagtcggcggcggcgatggctatggcggcgaccgccggaatgtctgtgacaaacgtgctgcggttgtggtggaagctgttggttctggtttctcttactctttgtgtgttggcttttctcaagctccaaaactactctctttgcgattcggaactttcctcttctacttcttcaatttctagtagatctcgagctgttgattatactggctatcccaaagttgctttcctctttctagtgcgtaggaatttgcctctcgatttcctttggggaaatttctttgagaatgctgacact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="-" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="41920" stop="40730"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="41624" g_stop="41433" g_length="192"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="190" r_length="190" r_score="0.906"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="41432" i_stop="41360" i_length="73">
            <donor d_prob="0.000" d_score="0.88"/>
            <acceptor a_prob="0.956" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="41359" g_stop="41039" g_length="321"/>
          <reference_exon_boundary r_type="cDNA" r_start="191" r_stop="511" r_length="321" r_score="0.950"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="41038" i_stop="40767" i_length="272">
            <donor d_prob="0.981" d_score="0.98"/>
            <acceptor a_prob="0.998" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="40766" g_stop="40755" g_length="12"/>
          <reference_exon_boundary r_type="cDNA" r_start="512" r_stop="523" r_length="12" r_score="0.917"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="-" ref_id="SGN-E442163" ref_strand="+">
        <total_alignment_score>0.934</total_alignment_score>
        <cumulative_length_of_scored_exons>525</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E442163" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="41624" e_stop="41433"/>
          <exon e_start="41359" e_stop="41039"/>
          <exon e_start="40766" e_stop="40755"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGAAAACGACGTCGTTAGGTTCTTCCCCTTCCTTGTCTTTGAGACAGTTGTGCACCAAGGAACAGAACAAAAGGCAAAGCACCAGCAAGCAGTGTGAAACCAAAAAAAAAGAGCATTTGGTGTCGTCTCTGAAATGCTTCTCTCTCTCATTCGCTCCCTTCAACCGCCACCTGTTCAATGTAAAGACACACATATATATGTGCATTTATTTATACACAGAGAGAAAGATAGAGTGCAAATCTCTTTTTTCTTTTAAATTTTCAGGAGAAGGAGCAAAGAGAATTCAAACCTATGAAGAAGAAGTCGGCGGCGGCGATGGCTATGGCGGCGACCGCCGGAATGTCTGTCAGAAACGTGTTGTGGTTGTGGTGGAAGTTGTTGGTTCTGGTTTCTCTTACTATTTGTGTGTTGGCTTTTCTAAAGCTTCAAAACTACTCTCTTTCCGATTCGGAACTTTCCTCTTCTACTTCTTCAATTTCCAGTAGATCTCGAGCTCTTTATTATACTGGCAATCCCAAAGTTGCGTTCCTCTTTCTAGTGCGGAGGAATTTGCCTCTCGATTTCCTTTGGGGAAATTTCTTTGAGGTTAGTTGATTTTAAATTTTTCAGAGCAAAAATTCATCAAATTTAGGATCAAAATAGCTCTTTGTCCTCCCTTTATTCTCTTTTGTGATGATTGAACTCTTCTTGCAGCTTCAAAATGTGTAACTGTGCATATTTTTTGGGAATAGTAGTGAAATTTCCATCTTTCTTAAATTTGCTAGACACAATGGAAATGTGAAAGTTTTTTGGTTGCACAGATATTCCCTGTTTCAAAACCTGAATATTTGATATCATTATCTGTTTGGTGTTTGCAGAATGCTGACCCT</genome_strand>
        <mrna_strand>CGCCAAACGACGTCGTTAGCGTCTTCTCCTTCCTTGTCTTTGAGACAGCTGTGCATCAAGGAACAGAACAAAAGGCAAAGCACCAGCTAGCAGTGTGAAACC-AAAAAAAA-AGCATTTGGTGTCGTCTCTGAAATGCTTCTCTCTCTCATTCGCTCCCTTCAACCGCCACCTGTTCAATGAGAAGAAGGAA.........................................................................GAAAAGGAGCAAAGAGAATTCAAACCTATGAAGAAGAAGTCGGCGGCGGCGATGGCTATGGCGGCGACCGCCGGAATGTCTGTGACAAACGTGCTGCGGTTGTGGTGGAAGCTGTTGGTTCTGGTTTCTCTTACTCTTTGTGTGTTGGCTTTTCTCAAGCTCCAAAACTACTCTCTTTGCGATTCGGAACTTTCCTCTTCTACTTCTTCAATTTCTAGTAGATCTCGAGCTGTTGATTATACTGGCTATCCCAAAGTTGCTTTCCTCTTTCTAGTGCGTAGGAATTTGCCTCTCGATTTCCTTTGGGGAAATTTCTTTGAG................................................................................................................................................................................................................................................................................AATGCTGACACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E365848" ref_strand="+" ref_description="SGN-E365848 [cLPT-8-D16]">
      <seq>aggcaaagcaccttcaggcagctagcagtgtgaaaccaaaaaaaaagcatttggtgtcgtgtctgaaatgcttctctctctcattcgctcccttcaaccgccacctgctcaatgagaagaaggaggaaaaggagcaaagagaattcaaacctatgaagaagaagtcgtcggcggcgatggctatggcggcgaccgccggaatgtctgtcagaaacgtgttgtggttgtggtggaagttgttggttctggtttctcttactatttgtgtgttggcttttctcaagcttcaaaactactctctgtccgattcggaactttcctcttctacttcttcaatttccagtagatctcgagctgtttattatactggcaatcccaaagttgcgttcctctttctagtgcgcaggaattcgcctctcgattt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="-" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="41841" stop="40761"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="41541" g_stop="41433" g_length="109"/>
          <reference_exon_boundary r_type="cDNA" r_start="19" r_stop="125" r_length="107" r_score="0.899"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="41432" i_stop="41360" i_length="73">
            <donor d_prob="0.000" d_score="0.86"/>
            <acceptor a_prob="0.956" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="41359" g_stop="41061" g_length="299"/>
          <reference_exon_boundary r_type="cDNA" r_start="126" r_stop="424" r_length="299" r_score="0.977"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="-" ref_id="SGN-E365848" ref_strand="+">
        <total_alignment_score>0.956</total_alignment_score>
        <cumulative_length_of_scored_exons>408</cumulative_length_of_scored_exons>
        <coverage percentage="0.962" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E365848" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="41541" e_stop="41433"/>
          <exon e_start="41359" e_stop="41061"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGCAAGCAGTGTGAAACCAAAAAAAAAGAGCATTTGGTGTCGTCTCTGAAATGCTTCTCTCTCTCATTCGCTCCCTTCAACCGCCACCTGTTCAATGTAAAGACACACATATATATGTGCATTTATTTATACACAGAGAGAAAGATAGAGTGCAAATCTCTTTTTTCTTTTAAATTTTCAGGAGAAGGAGCAAAGAGAATTCAAACCTATGAAGAAGAAGTCGGCGGCGGCGATGGCTATGGCGGCGACCGCCGGAATGTCTGTCAGAAACGTGTTGTGGTTGTGGTGGAAGTTGTTGGTTCTGGTTTCTCTTACTATTTGTGTGTTGGCTTTTCTAAAGCTTCAAAACTACTCTCTTTCCGATTCGGAACTTTCCTCTTCTACTTCTTCAATTTCCAGTAGATCTCGAGCTCTTTATTATACTGGCAATCCCAAAGTTGCGTTCCTCTTTCTAGTGCGGAGGAATTTGCCTCTCGATTT</genome_strand>
        <mrna_strand>CAGCTAGCAGTGTGAAACC-AAAAAAAA-AGCATTTGGTGTCGTGTCTGAAATGCTTCTCTCTCTCATTCGCTCCCTTCAACCGCCACCTGCTCAATGAGAAGAAGGAG.........................................................................GAAAAGGAGCAAAGAGAATTCAAACCTATGAAGAAGAAGTCGTCGGCGGCGATGGCTATGGCGGCGACCGCCGGAATGTCTGTCAGAAACGTGTTGTGGTTGTGGTGGAAGTTGTTGGTTCTGGTTTCTCTTACTATTTGTGTGTTGGCTTTTCTCAAGCTTCAAAACTACTCTCTGTCCGATTCGGAACTTTCCTCTTCTACTTCTTCAATTTCCAGTAGATCTCGAGCTGTTTATTATACTGGCAATCCCAAAGTTGCGTTCCTCTTTCTAGTGCGCAGGAATTCGCCTCTCGATTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E344570" ref_strand="+" ref_description="SGN-E344570 [cTOF-14-I1]">
      <seq>gatggtcttcagaacaaagttaaatgcagatagttccatcaacaaatacaagacgaggcttgtagttaaagggtatgcacaaatttatggtgtcgattactctgacaccttttctcctgttgcaagattagacacaatcaggttgctacccgcaatagcagcacaaatggattctcagatagtgattaggccagatccgcagatgatatgagaagtacctctcgccattgtttcagcctaggttcaggaatattctcatggtcatctaagaaacaggaaattgttgcacaatcaacagcagcaacaggagcagtaaaccaagtcttgtggcttagaaagatcatgtatgatttacatgtggaacagaaggaaagtactagcattcttgtcgacaaccaggcagctattgcaatctcaaacaatccggtgtttcacaagaagaccaagcatttcaacatcaagttctattttctgagagaagtacagcaaaggggagaagtaactctagtctatactaagactttaccgatcagcaaattcgagcttcttagacagaaaattggagtttgcagtatccaaagcaaggaggagtgcaaggaatctgttttgaaccgcagtaaatttaattttactgcctatgttttaagttagacttagtcaattagttgttagtcatgctttcctattatttangnnagtgtttagtgactgctagatcatgcattattattagtgactgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="-" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="48578" stop="47238"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="48278" g_stop="47538" g_length="741"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="741" r_length="741" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="-" ref_id="SGN-E344570" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>741</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E344570" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="48278" e_stop="47538"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATGGTCTTCAGAACAAAGTTAAATGCAGATAGTTCCATCAACAAATACAAGACGAGGCTTGTAGTTAAAGGGTATGCACAAATTTATGGTGTCGATTACTCTGACACCTTTTCTCCTGTTGCAAGATTAGACACAATCAGGTTGCTACCCGCAATAGCAGCACAAATGGATTCTCAGATAGTGATTAGGCCAGATCCGCAGATGATATGAGAAGTACCTCTCGCCATTGTTTCAGCCTAGGTTCAGGAATATTCTCATGGTCATCTAAGAAACAGGAAATTGTTGCACAATCAACAGCAGCAACAGGAGCAGTAAACCAAGTCTTGTGGCTTAGAAAGATCATGTATGATTTACATGTGGAACAGAAGGAAAGTACTAGCATTCTTGTCGACAACCAGGCAGCTATTGCAATCTCAAACAATCCGGTGTTTCACAAGAAGACCAAGCATTTCAACATCAAGTTCTATTTTCTGAGAGAAGTACAGCAAAGGGGAGAAGTAACTCTAGTCTATACTAAGACTTTACCGATCAGCAAATTCGAGCTTCTTAGACAGAAAATTGGAGTTTGCAGTATCCAAAGCAAGGAGGAGTGCAAGGAATCTGTTTTGAACCGCAGTAAATTTAATTTTACTGCCTATGTTTTAAGTTAGACTTAGTCAATTAGTTGTTAGTCATGCTTTCCTATTATTTAGGAGTTGTTTTAGTGACTGCTAGATCATGCATTATTATTAGTGACTGCT</genome_strand>
        <mrna_strand>GATGGTCTTCAGAACAAAGTTAAATGCAGATAGTTCCATCAACAAATACAAGACGAGGCTTGTAGTTAAAGGGTATGCACAAATTTATGGTGTCGATTACTCTGACACCTTTTCTCCTGTTGCAAGATTAGACACAATCAGGTTGCTACCCGCAATAGCAGCACAAATGGATTCTCAGATAGTGATTAGGCCAGATCCGCAGATGATATGAGAAGTACCTCTCGCCATTGTTTCAGCCTAGGTTCAGGAATATTCTCATGGTCATCTAAGAAACAGGAAATTGTTGCACAATCAACAGCAGCAACAGGAGCAGTAAACCAAGTCTTGTGGCTTAGAAAGATCATGTATGATTTACATGTGGAACAGAAGGAAAGTACTAGCATTCTTGTCGACAACCAGGCAGCTATTGCAATCTCAAACAATCCGGTGTTTCACAAGAAGACCAAGCATTTCAACATCAAGTTCTATTTTCTGAGAGAAGTACAGCAAAGGGGAGAAGTAACTCTAGTCTATACTAAGACTTTACCGATCAGCAAATTCGAGCTTCTTAGACAGAAAATTGGAGTTTGCAGTATCCAAAGCAAGGAGGAGTGCAAGGAATCTGTTTTGAACCGCAGTAAATTTAATTTTACTGCCTATGTTTTAAGTTAGACTTAGTCAATTAGTTGTTAGTCATGCTTTCCTATTATTTANGNNAGTGTTTAGTGACTGCTAGATCATGCATTATTATTAGTGACTGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E276594" ref_strand="+" ref_description="SGN-E276594 [cLEN-17-B24]">
      <seq>ttcttaagtgtttggttgtgtctgttttgttcatgttcctcatgttagacgtgacaaacttgacaagaaggcaatcggcaatcataggcatccatgtggcttacagtgaagtttctaaagcctacaaggtctatcatcctcagacaaagaagatgacaattacaagagatgttcattttagtgagaatgaatagtgggactggaagaactctcataaatcaggaagtcgctctctagaagcaaacatcagtcctcctgaagagcaaaaaacagaacactggcagcaagaactagaagatgatcatccagtcaaggggaggaggttgttgtcagatatctatcagaggtgtaatgtcgccatctatgaacctgctggtcccgtagaagctttgcaagacccaaaatggaagaaagcaatggaggaggagatctccatgattgagaaaaataaaacttgggtgctggtaaacaaacctgaagatagaaaagtcattggtgtgagatgggtcttcagaacaaagttaaatgcagatagttccatcaacaaatacaaagcgaggcttgtagttaaagggtatgcacaaatttatggtattgattactctgacactcctgttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="-" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="49073" stop="47866"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="48773" g_stop="48163" g_length="611"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="618" r_length="618" r_score="0.920"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="-" ref_id="SGN-E276594" ref_strand="+">
        <total_alignment_score>0.920</total_alignment_score>
        <cumulative_length_of_scored_exons>611</cumulative_length_of_scored_exons>
        <coverage percentage="0.989" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E276594" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="48773" e_stop="48163"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCTTAAAGTGTTTGGTTGTGTCTGTTTTGTTCATGTTCCTCAGGTTAAACATGACAAACTTGACAAG-A---AA---GCAATCATAGGCATCCATGTGGGTTACAGTGAAGTTTCTAAAGCCTACAAGGTTTATCATCCTCAGACAGGAAAGATGACAATTACAAGAGATGTTCATTTTAGTGAGAATGAACAGTGGAACTGGAAGAACTCTCAGAAATCAGGAAGACGCTCTCTAGAAGCAAACATCAGCCCTCCTGAAGAGCAAAAAATAGAACACTGGCAGCAAAAACTAGAAGATGATCATCCAGTCAAGGGGAGAAGATTGTTGTCAGATATCTATCAGAGGTATAATGTCGCCATCTATGAACCTGCTGGTCCAGTAGAAGCTTTGCAAGACCCAAAATGGAAGAAAGCAATGGAGGAGGAAATCTCCATGATTGAGAAAAATAAAACTTGGGTGCTTGTCAACAAACCTGAAGATAGAAAAGTCATTGGTGTGAGAT-GGTCTTCAGAACAAAGTTAAATGCAGATAGTTCCATCAACAAATACAAGACGAGGCTTGTAGTTAAAGGGTATGCACAAATTTATGGTGTCGATTACTCTGACACCTTTTCTC</genome_strand>
        <mrna_strand>TTCTT-AAGTGTTTGGTTGTGTCTGTTTTGTTCATGTTCCTCATGTTAGACGTGACAAACTTGACAAGAAGGCAATCGGCAATCATAGGCATCCATGTGGCTTACAGTGAAGTTTCTAAAGCCTACAAGGTCTATCATCCTCAGACAAAGAAGATGACAATTACAAGAGATGTTCATTTTAGTGAGAATGAATAGTGGGACTGGAAGAACTCTCATAAATCAGGAAGTCGCTCTCTAGAAGCAAACATCAGTCCTCCTGAAGAGCAAAAAACAGAACACTGGCAGCAAGAACTAGAAGATGATCATCCAGTCAAGGGGAGGAGGTTGTTGTCAGATATCTATCAGAGGTGTAATGTCGCCATCTATGAACCTGCTGGTCCCGTAGAAGCTTTGCAAGACCCAAAATGGAAGAAAGCAATGGAGGAGGAGATCTCCATGATTGAGAAAAATAAAACTTGGGTGCTGGTAAACAAACCTGAAGATAGAAAAGTCATTGGTGTGAGATGGGTCTTCAGAACAAAGTTAAATGCAGATAGTTCCATCAACAAATACAAAGCGAGGCTTGTAGTTAAAGGGTATGCACAAATTTATGGTATTGATTACTCTGACACTCCTGTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E395101" ref_strand="+" ref_description="SGN-E395101 [TUS-35-P9]">
      <seq>tttcttaagtgtttggttgtgtctgttttgttcatgttcctcatgttagacgtgacaaacttgacaagaaggcaatcggcaatcataggcatccatgtggcttacagtgaagtttctaaagcctacaaggtctatcatcctcagacaaagaagatgacaattacaagagatgttcattttagtgagaatgaatagtgggactggaagaactctcataaatcaggaagtcgctctctagaagcaaacatcagtcctcctgaagagcaaaaaacagaacactggcagcaagaactagaagatgatcatccagtcaaggggaggaggttgttgtcagatatctatcagaggtgtaatgtcgccatctatgaacctgctggtcccgtagaagctttgcaagacccaaaatggaagaaagcaatggaggaggagatctccatgattgagaaaaataaaacttgggtgctggtaaacaaacctgaagatagaaaagtcattggtgtgagatgggtcttcagaacaaagttaaatgcagatagttccatcaacaaatacaaggcgaggcttgtagttaaagggtatgcccaaattttatggtattgattactctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="-" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="49074" stop="47875"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="48774" g_stop="48175" g_length="600"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="608" r_length="608" r_score="0.925"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="-" ref_id="SGN-E395101" ref_strand="+">
        <total_alignment_score>0.925</total_alignment_score>
        <cumulative_length_of_scored_exons>600</cumulative_length_of_scored_exons>
        <coverage percentage="0.987" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E395101" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="48774" e_stop="48175"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCTTAAAGTGTTTGGTTGTGTCTGTTTTGTTCATGTTCCTCAGGTTAAACATGACAAACTTGACAAG-A---AA---GCAATCATAGGCATCCATGTGGGTTACAGTGAAGTTTCTAAAGCCTACAAGGTTTATCATCCTCAGACAGGAAAGATGACAATTACAAGAGATGTTCATTTTAGTGAGAATGAACAGTGGAACTGGAAGAACTCTCAGAAATCAGGAAGACGCTCTCTAGAAGCAAACATCAGCCCTCCTGAAGAGCAAAAAATAGAACACTGGCAGCAAAAACTAGAAGATGATCATCCAGTCAAGGGGAGAAGATTGTTGTCAGATATCTATCAGAGGTATAATGTCGCCATCTATGAACCTGCTGGTCCAGTAGAAGCTTTGCAAGACCCAAAATGGAAGAAAGCAATGGAGGAGGAAATCTCCATGATTGAGAAAAATAAAACTTGGGTGCTTGTCAACAAACCTGAAGATAGAAAAGTCATTGGTGTGAGAT-GGTCTTCAGAACAAAGTTAAATGCAGATAGTTCCATCAACAAATACAAGACGAGGCTTGTAGTTAAAGGGTATGCACAAA-TTTATGGTGTCGATTACTCTG</genome_strand>
        <mrna_strand>TTTCTT-AAGTGTTTGGTTGTGTCTGTTTTGTTCATGTTCCTCATGTTAGACGTGACAAACTTGACAAGAAGGCAATCGGCAATCATAGGCATCCATGTGGCTTACAGTGAAGTTTCTAAAGCCTACAAGGTCTATCATCCTCAGACAAAGAAGATGACAATTACAAGAGATGTTCATTTTAGTGAGAATGAATAGTGGGACTGGAAGAACTCTCATAAATCAGGAAGTCGCTCTCTAGAAGCAAACATCAGTCCTCCTGAAGAGCAAAAAACAGAACACTGGCAGCAAGAACTAGAAGATGATCATCCAGTCAAGGGGAGGAGGTTGTTGTCAGATATCTATCAGAGGTGTAATGTCGCCATCTATGAACCTGCTGGTCCCGTAGAAGCTTTGCAAGACCCAAAATGGAAGAAAGCAATGGAGGAGGAGATCTCCATGATTGAGAAAAATAAAACTTGGGTGCTGGTAAACAAACCTGAAGATAGAAAAGTCATTGGTGTGAGATGGGTCTTCAGAACAAAGTTAAATGCAGATAGTTCCATCAACAAATACAAGGCGAGGCTTGTAGTTAAAGGGTATGCCCAAATTTTATGGTATTGATTACTCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E395097" ref_strand="+" ref_description="SGN-E395097 [TUS-35-P1]">
      <seq>tttcttaagtgtttggttgtgtctgttttgttcatgttcctcatgttagacgtgacaaacttgacaagaaggcaatcggcaatcataggcatccatgtggcttacagtgaagtttctaaagcctacaaggtctatcatcctcagacaaagaagatgacaattacaagagatgttcattttagtgagaatgaatagtgggactggaagaactctcataaatcaggaagtcgctctctagaagcaaacatcagtcctcctgaagagcaaaaaacagaacactggcagcaagaactagaagatgatcatccagtcaaggggaggaggttgttgtcagatatctatcagaggtgtaatgtcgccatctatgaacctgctggtcccgtagaagctttgcaagacccaaaatggaagaaagcaatggaggaggagatctccatgattgagaaaaataaaacttgggtgctggtaaacaaacctgaagatagaaaagtcattggtgtgagatgggtctttcagaacaaagttaaatgcagatagttccatcaaacaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="-" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="49074" stop="47933"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="48774" g_stop="48233" g_length="542"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="550" r_length="550" r_score="0.921"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="-" ref_id="SGN-E395097" ref_strand="+">
        <total_alignment_score>0.921</total_alignment_score>
        <cumulative_length_of_scored_exons>542</cumulative_length_of_scored_exons>
        <coverage percentage="0.985" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E395097" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="48774" e_stop="48233"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCTTAAAGTGTTTGGTTGTGTCTGTTTTGTTCATGTTCCTCAGGTTAAACATGACAAACTTGACAAG-A---AA---GCAATCATAGGCATCCATGTGGGTTACAGTGAAGTTTCTAAAGCCTACAAGGTTTATCATCCTCAGACAGGAAAGATGACAATTACAAGAGATGTTCATTTTAGTGAGAATGAACAGTGGAACTGGAAGAACTCTCAGAAATCAGGAAGACGCTCTCTAGAAGCAAACATCAGCCCTCCTGAAGAGCAAAAAATAGAACACTGGCAGCAAAAACTAGAAGATGATCATCCAGTCAAGGGGAGAAGATTGTTGTCAGATATCTATCAGAGGTATAATGTCGCCATCTATGAACCTGCTGGTCCAGTAGAAGCTTTGCAAGACCCAAAATGGAAGAAAGCAATGGAGGAGGAAATCTCCATGATTGAGAAAAATAAAACTTGGGTGCTTGTCAACAAACCTGAAGATAGAAAAGTCATTGGTGTGAGAT-GGTC-TTCAGAACAAAGTTAAATGCAGATAGTTCCATCAACAAA</genome_strand>
        <mrna_strand>TTTCTT-AAGTGTTTGGTTGTGTCTGTTTTGTTCATGTTCCTCATGTTAGACGTGACAAACTTGACAAGAAGGCAATCGGCAATCATAGGCATCCATGTGGCTTACAGTGAAGTTTCTAAAGCCTACAAGGTCTATCATCCTCAGACAAAGAAGATGACAATTACAAGAGATGTTCATTTTAGTGAGAATGAATAGTGGGACTGGAAGAACTCTCATAAATCAGGAAGTCGCTCTCTAGAAGCAAACATCAGTCCTCCTGAAGAGCAAAAAACAGAACACTGGCAGCAAGAACTAGAAGATGATCATCCAGTCAAGGGGAGGAGGTTGTTGTCAGATATCTATCAGAGGTGTAATGTCGCCATCTATGAACCTGCTGGTCCCGTAGAAGCTTTGCAAGACCCAAAATGGAAGAAAGCAATGGAGGAGGAGATCTCCATGATTGAGAAAAATAAAACTTGGGTGCTGGTAAACAAACCTGAAGATAGAAAAGTCATTGGTGTGAGATGGGTCTTTCAGAACAAAGTTAAATGCAGATAGTTCCATCAAACAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E275681" ref_strand="+" ref_description="SGN-E275681 [cLEN-18-B19]">
      <seq>ttcttaagtgtttggttgtgtctgttttgttcatgttcctcatgttagacgtgacaaacttgacaagaaggcaatcggcaatcataggcatccatgtggcttacagtgaagtttctaaagcctacaaggtctatcatcctcagacaaagaagatgacaattacaagagatgttcattttagtgagaatgaatagtgggactggaagaactctcataaatcaggaagtcgctctctagaagcaaacatcagtcctcctgaagagcaaaaaacagaacactggcagcaagaactagaagatgatcatccagtcaaggggaggaggttgttgtcagatatctatcagaggtgtaatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="-" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="49073" stop="48126"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="48773" g_stop="48426" g_length="348"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="354" r_length="354" r_score="0.905"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="-" ref_id="SGN-E275681" ref_strand="+">
        <total_alignment_score>0.905</total_alignment_score>
        <cumulative_length_of_scored_exons>348</cumulative_length_of_scored_exons>
        <coverage percentage="0.983" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E275681" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="48773" e_stop="48426"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCTTAAAGTGTTTGGTTGTGTCTGTTTTGTTCATGTTCCTCAGGTTAAACATGACAAACTTGACAAG-A---AA---GCAATCATAGGCATCCATGTGGGTTACAGTGAAGTTTCTAAAGCCTACAAGGTTTATCATCCTCAGACAGGAAAGATGACAATTACAAGAGATGTTCATTTTAGTGAGAATGAACAGTGGAACTGGAAGAACTCTCAGAAATCAGGAAGACGCTCTCTAGAAGCAAACATCAGCCCTCCTGAAGAGCAAAAAATAGAACACTGGCAGCAAAAACTAGAAGATGATCATCCAGTCAAGGGGAGAAGATTGTTGTCAGATATCTATCAGAGGTATAATG</genome_strand>
        <mrna_strand>TTCTT-AAGTGTTTGGTTGTGTCTGTTTTGTTCATGTTCCTCATGTTAGACGTGACAAACTTGACAAGAAGGCAATCGGCAATCATAGGCATCCATGTGGCTTACAGTGAAGTTTCTAAAGCCTACAAGGTCTATCATCCTCAGACAAAGAAGATGACAATTACAAGAGATGTTCATTTTAGTGAGAATGAATAGTGGGACTGGAAGAACTCTCATAAATCAGGAAGTCGCTCTCTAGAAGCAAACATCAGTCCTCCTGAAGAGCAAAAAACAGAACACTGGCAGCAAGAACTAGAAGATGATCATCCAGTCAAGGGGAGGAGGTTGTTGTCAGATATCTATCAGAGGTGTAATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E340808" ref_strand="+" ref_description="SGN-E340808 [cTOF-5-B1]">
      <seq>aaccatattcaggtgaaggatcaatgataaattcatcatattcagagtcagggcttgacattaatggtttgcctagcaaagaagctgcttcaagagtcgtccaatggcttgagaaaagtggaaacgggaagaaaaaggtaaattacaagttaagggactggctttttgcccggcaacgctattggggggagcctattccagttatctttttggatgacacaggagaaggtattccagttccagaaaccgagcttcctcttacccttcctgagttggatgatttcactcccactgggactggggagccacctcttgccaaagcagattcttgggttataaccaaagatcctttatctgaaaaacctgctaggcgagaaacaaacaccatgccccagtgggctggttcttgctggtactatctaagatttatggacccaaaaaactccagcgcattggttgacaaggcacaagaacagtactggggccctgttgacgtgtatgttgggtgtgctgagcatgctgntcttcatttactttatgcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="-" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="53340" stop="51033"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="53040" g_stop="52904" g_length="137"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="137" r_length="137" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="52903" i_stop="52743" i_length="161">
            <donor d_prob="0.952" d_score="1.00"/>
            <acceptor a_prob="0.974" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="52742" g_stop="52548" g_length="195"/>
          <reference_exon_boundary r_type="cDNA" r_start="138" r_stop="332" r_length="195" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="52547" i_stop="52399" i_length="149">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="52398" g_stop="52319" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="333" r_stop="412" r_length="80" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="52318" i_stop="51594" i_length="725">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="51593" g_stop="51531" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="413" r_stop="475" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="51530" i_stop="51400" i_length="131">
            <donor d_prob="0.942" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="51399" g_stop="51333" g_length="67"/>
          <reference_exon_boundary r_type="cDNA" r_start="476" r_stop="542" r_length="67" r_score="0.955"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="-" ref_id="SGN-E340808" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>542</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E340808" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="53040" e_stop="52904"/>
          <exon e_start="52742" e_stop="52548"/>
          <exon e_start="52398" e_stop="52319"/>
          <exon e_start="51593" e_stop="51531"/>
          <exon e_start="51399" e_stop="51333"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACCATATTCAGGTGAAGGATCAATGATAAATTCATCATATTCAGAGTCAGGGCTTGACATTAATGGTTTGCCTAGCAAAGAAGCTGCTTCAAGAGTCGTCCAATGGCTTGAGAAAAGTGGAAACGGGAAGAAAAAGGTAACCTCCTCTGATTTATGAGGGATTCCTCATAAGTTTGTATATCAGTTTTTGGAAAGTTGATGATCTTAAACAGAATTATGAAGATAAGTATGAAGGAAGCAATTATCATTTCTACTGCTCAGAAGATCTTACTTATTGCCAGATTTATCTTGCTTCAGGTAAATTACAAGTTAAGGGACTGGCTTTTTGCCCGGCAACGCTATTGGGGGGAGCCTATTCCAGTTATCTTTTTGGATGACACAGGAGAAGGTATTCCAGTTCCAGAAACCGAGCTTCCTCTTACCCTTCCTGAGTTGGATGATTTCACTCCCACTGGGACTGGGGAGCCACCTCTTGCCAAAGCAGATTCTTGGGTAGGTTTTGCCTAATATGTGATGATTTCAACTTGACAAACATTGGTTCTTTGTCATTTGGTACTTCTCTTTTTCCGTTTTGTTCTTCCCTATTAGCTTACAACACTTCATATAATGACATTTACTATTTTGACTGAACAATTTGTCAGGTTATAACCAAAGATCCTTTATCTGAAAAACCTGCTAGGCGAGAAACAAACACCATGCCCCAGTGGGCTGGTTCTTGCTGGTAATCAGCTTTGTATTTGCTTCAATATTGGGTGTTTATGGAAGTTTAATTTCTTTTACAAGATCTACACCTAAAAAGACTTTGTATTTAACTAGTATTAGTTTTGTTTTTAAATATTCTATATGGTTGTCATTTGTCAAAAGGGAGAAATCTAATGGGAATAGTACCAATTTTTTTTTAAAAAAAGTGAGAAAACTAATGAGAATATATATCTTTTATGTGTTTGTGTTTGTGGGAAAGAGTACGATAATATGGACAAGAAGCATAGAATATTATAAGGCAAAGCAGATAGGAAGGATTTTTACACTTACCAATTATAAAAATGAAGAAGATTGGAAGTACTTTACCCTGAATTTACTTGTTCGTTATCCATAGTGGGTGGCATTGGGTGCATAATTTGTCACCGGTAGTTATGGAAGTAAAAGGCCAACACTTACCTACTGCATTTAGATAAGAAGAGTGTCTGATGTTGACTCTCAAAATTTGGCTGCTTACTATGGGATTGGAAGTAAATGTGAGAAAAGCAAGGGATCTATTAATACTTAAATGTTATGTACTTAAACTGATAATGTGTGGTTCAAAAAACCAATGCAACTTTCACCTTCGTCCTGTATTTAAAGAAGAAACCATCTTAGCTTTCAAGGTTCCTATGGATGTGTCATATGTCTGATCTGTATCTTGGTGCTTTTCATTGAACCATGTCACTCATCCTCTTTGATATGCAGGTACTATCTAAGATTTATGGACCCAAAAAACTCCAGCGCATTGGTTGACAAGGCACAAGAACAGTGAGTTTGCTTTCTCTTTGTACAATCAGAGCGGCCATATTTTTCTGGCTTTCATTTTGTTATACATGCTAGTTTGGAAAGTCTTGGTGTTTCAAAGTATTAGCCATTCATTTGCTTCAATTTTCTTATAGGTACTGGGGCCCTGTTGACGTGTATGTTGGTGGTGCTGAGCATGCTGTTCTTCATTTACTTTATGCC</genome_strand>
        <mrna_strand>AACCATATTCAGGTGAAGGATCAATGATAAATTCATCATATTCAGAGTCAGGGCTTGACATTAATGGTTTGCCTAGCAAAGAAGCTGCTTCAAGAGTCGTCCAATGGCTTGAGAAAAGTGGAAACGGGAAGAAAAAG.................................................................................................................................................................GTAAATTACAAGTTAAGGGACTGGCTTTTTGCCCGGCAACGCTATTGGGGGGAGCCTATTCCAGTTATCTTTTTGGATGACACAGGAGAAGGTATTCCAGTTCCAGAAACCGAGCTTCCTCTTACCCTTCCTGAGTTGGATGATTTCACTCCCACTGGGACTGGGGAGCCACCTCTTGCCAAAGCAGATTCTTGG.....................................................................................................................................................GTTATAACCAAAGATCCTTTATCTGAAAAACCTGCTAGGCGAGAAACAAACACCATGCCCCAGTGGGCTGGTTCTTGCTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACTATCTAAGATTTATGGACCCAAAAAACTCCAGCGCATTGGTTGACAAGGCACAAGAACA...................................................................................................................................GTACTGGGGCCCTGTTGACGTGTATGTTGGGTGTGCTGAGCATGCTGNTCTTCATTTACTTTATGCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E277392" ref_strand="+" ref_description="SGN-E277392 [cLER-3-M2]">
      <seq>tcaggtgaaggatcaatgataaattcatcatattcagagtcagggcttgacattaatggtttgcctagcaaagaagctgcttcaagagtcgtccaatggcttgagaaaagtggaaacgggaagaaaaaggtaaattacaagttaagggactggctttttgcccggcaacgctattggggggagcctattccagttatctttttggatgacacaggagaaggtattccagttccagaaaccgagcttcctcttacccttcctgagttggatgatttcactcccactgggactggggagccacctcttgccaaagcagattcttgggtaggttttgcctaatatgtgatgatttcaacttgacaaacattggttctttgtcatttggttataaccaaagatcctttatctgaaaaacctgctaggcgagaaacaaacaccatgccccag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="-" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="53332" stop="52036"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="53032" g_stop="52904" g_length="129"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="129" r_length="129" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="52903" i_stop="52743" i_length="161">
            <donor d_prob="0.952" d_score="1.00"/>
            <acceptor a_prob="0.974" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="52742" g_stop="52488" g_length="255"/>
          <reference_exon_boundary r_type="cDNA" r_start="130" r_stop="384" r_length="255" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="52487" i_stop="52399" i_length="89">
            <donor d_prob="0.830" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="52398" g_stop="52336" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="385" r_stop="447" r_length="63" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="-" ref_id="SGN-E277392" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>447</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E277392" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="53032" e_stop="52904"/>
          <exon e_start="52742" e_stop="52488"/>
          <exon e_start="52398" e_stop="52336"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAGGTGAAGGATCAATGATAAATTCATCATATTCAGAGTCAGGGCTTGACATTAATGGTTTGCCTAGCAAAGAAGCTGCTTCAAGAGTCGTCCAATGGCTTGAGAAAAGTGGAAACGGGAAGAAAAAGGTAACCTCCTCTGATTTATGAGGGATTCCTCATAAGTTTGTATATCAGTTTTTGGAAAGTTGATGATCTTAAACAGAATTATGAAGATAAGTATGAAGGAAGCAATTATCATTTCTACTGCTCAGAAGATCTTACTTATTGCCAGATTTATCTTGCTTCAGGTAAATTACAAGTTAAGGGACTGGCTTTTTGCCCGGCAACGCTATTGGGGGGAGCCTATTCCAGTTATCTTTTTGGATGACACAGGAGAAGGTATTCCAGTTCCAGAAACCGAGCTTCCTCTTACCCTTCCTGAGTTGGATGATTTCACTCCCACTGGGACTGGGGAGCCACCTCTTGCCAAAGCAGATTCTTGGGTAGGTTTTGCCTAATATGTGATGATTTCAACTTGACAAACATTGGTTCTTTGTCATTTGGTACTTCTCTTTTTCCGTTTTGTTCTTCCCTATTAGCTTACAACACTTCATATAATGACATTTACTATTTTGACTGAACAATTTGTCAGGTTATAACCAAAGATCCTTTATCTGAAAAACCTGCTAGGCGAGAAACAAACACCATGCCCCAG</genome_strand>
        <mrna_strand>TCAGGTGAAGGATCAATGATAAATTCATCATATTCAGAGTCAGGGCTTGACATTAATGGTTTGCCTAGCAAAGAAGCTGCTTCAAGAGTCGTCCAATGGCTTGAGAAAAGTGGAAACGGGAAGAAAAAG.................................................................................................................................................................GTAAATTACAAGTTAAGGGACTGGCTTTTTGCCCGGCAACGCTATTGGGGGGAGCCTATTCCAGTTATCTTTTTGGATGACACAGGAGAAGGTATTCCAGTTCCAGAAACCGAGCTTCCTCTTACCCTTCCTGAGTTGGATGATTTCACTCCCACTGGGACTGGGGAGCCACCTCTTGCCAAAGCAGATTCTTGGGTAGGTTTTGCCTAATATGTGATGATTTCAACTTGACAAACATTGGTTCTTTGTCATTTG.........................................................................................GTTATAACCAAAGATCCTTTATCTGAAAAACCTGCTAGGCGAGAAACAAACACCATGCCCCAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E736405" ref_strand="+" ref_description="SGN-E736405 [LC05CF09]">
      <seq>cttatcaggctgaagtgcctgtcaattggtgtccagcacttggtactgtcttggcaaatgaagaagtaattgatggtgtaagtgaaagaggggggcatccagtcatcagaaagcctatgcggcagtggatgttgaggataactgcttatgctgaccgtcttcttgaggatttagatgacctatactggcctgaaagtataaaggaaatgcagaggaattggattggtaggtcagaaggagcagaattggattttgttgtcataaatggtaacagtcaggaagaagagaaaagaataacagtttatacaacaagaccagacactatttttggtgcaacatacttagtccttgcacctgagcatccctttctgtcatcacttgtatcagaagcacaaagtaaacatgtagaggagtacagggaacatgcttttagaaagagtgaccttgagaggactgagcttcaaaaggaaaaaacaggcgtctttactggttgttatgcaaaaaatccagccaatggccaagctgttcctatttgggttgctgattatgtcttgggaagctacgggacaggagcaataatggctgtgcctgcccatgacacacgcgactttgaatttgctatgaagtacactatcccaatttcttgggttgtaagaccagatgatagcaattgtggcaattttgagaaaccatattcaggtgaaggatcaatgataaattcatcatattcagagtcagggcttgacattaatggtttgcctagcaaagaagctgcttcaagagtcgtccaatggcttgagaaaagtggaaacgggaagaaaaagtaaattacaagttaagggactggcttttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="-" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="54520" stop="52413"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54315" g_stop="54308" g_length="8"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="8" r_length="8" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="54307" i_stop="54215" i_length="93">
            <donor d_prob="0.969" d_score="0.00"/>
            <acceptor a_prob="0.963" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="54214" g_stop="54110" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="9" r_stop="113" r_length="105" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="54109" i_stop="53970" i_length="140">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.918" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="53969" g_stop="53746" g_length="224"/>
          <reference_exon_boundary r_type="cDNA" r_start="114" r_stop="337" r_length="224" r_score="0.996"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="53745" i_stop="53658" i_length="88">
            <donor d_prob="0.804" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="53657" g_stop="53591" g_length="67"/>
          <reference_exon_boundary r_type="cDNA" r_start="338" r_stop="404" r_length="67" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="53590" i_stop="53506" i_length="85">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.137" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="53505" g_stop="53351" g_length="155"/>
          <reference_exon_boundary r_type="cDNA" r_start="405" r_stop="559" r_length="155" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="53350" i_stop="53169" i_length="182">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="53168" g_stop="52904" g_length="265"/>
          <reference_exon_boundary r_type="cDNA" r_start="560" r_stop="823" r_length="264" r_score="0.996"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="52903" i_stop="52743" i_length="161">
            <donor d_prob="0.952" d_score="0.98"/>
            <acceptor a_prob="0.974" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="52742" g_stop="52713" g_length="30"/>
          <reference_exon_boundary r_type="cDNA" r_start="824" r_stop="853" r_length="30" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="-" ref_id="SGN-E736405" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>854</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E736405" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54315" e_stop="54308"/>
          <exon e_start="54214" e_stop="54110"/>
          <exon e_start="53969" e_stop="53746"/>
          <exon e_start="53657" e_stop="53591"/>
          <exon e_start="53505" e_stop="53351"/>
          <exon e_start="53168" e_stop="52904"/>
          <exon e_start="52742" e_stop="52713"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTATCAGGTTTGAAGTTTTCTGAATTTCATTTTTATTATGGCAATGGTAGGTTGAAGTGACCCTCTTCGACTTATCAATGTTCTTTGAATCCAATATTAGGCTGAAGTGCCTGTCAATTGGTGTCCAGCACTTGGTACTGTCTTGGCAAATGAAGAAGTAATTGATGGTGTAAGTGAAAGAGGGGGGCATCCAGTCATCAGAAAGGTAAGCTTTCAAATACCATGTTACATTTTGAGGTAGGAAATTTCAAAAGAACCGTACTTCTGTTTACTCAATGTCTAGTCCTTATTTTCATTGCCTGGATGGTTTCATGATTTTACAGTACATTGTTTATTGCCAAGCAGCCTATGCGGCAGTGGATGTTGAGGATAACTGCTTATGCTGACCGTCTTCTTGAGGATTTAGATGACCTAGACTGGCCTGAAAGTATAAAGGAAATGCAGAGGAATTGGATTGGTAGGTCAGAAGGAGCAGAATTGGATTTTGTTGTCATAAATGGTAACAGTCAGGAAGAAGAGAAAAGAATAACAGTTTATACAACAAGACCAGACACTATTTTTGGTGCAACGTATGCGTTCTTCTTTTGATATCTAATCATTAATGCCCCATTTGTAGACTACATTTCACATGTCGCTAGTCTTCTTTTTGCTGTGCAGATACTTAGTCCTTGCACCTGAGCATCCCTTTCTGTCATCACTTGTATCAGAAGCACAAAGTAAACATGTATGCTCTTCTTCCCCTTGATCTTCTCTTAATCTCAAAATGTTGTTCATTCTTGTTCTTTTAAGAGATGACGGATGTGAGACAGGTAGAGGAGTACAGGGAACATGCTTTTAGAAAGAGTGACCTTGAGAGGACTGAGCTTCAAAAGGAAAAAACAGGCGTCTTTACTGGTTGTTATGCAAAAAATCCAGCCAATGGCCAAGCTGTTCCTATTTGGGTTGCTGATTATGTCTTGGGAAGGTTGTCTACCTTCTTATCTCCTCTTGTCCTACATTTATCGAACAATATATGTCATATGAGTCTATGACTGCTTAATGCTCTCGTTACGAATGTGAACCTAATACTAAAGTATTTATTTGTCTTACGAACTTCGTGTTGACAAAGTTTTGGGGTTTTATAGTAGCGTAACAATTATGATGCAGCTACGGGACAGGAGCAATAATGGCTGTGCCTGCCCATGACACACGCGACTTTGAATTTGCTATGAAGTACACTATCCCAATTTCTTGGGTTGTAAGACCAGATGATAGCAATTGTGGCAATTTTGAGAAACCATATTCAGGTGAAGGATCAATGATAAATTCATCATATTCAGAGTCAGGGCTTGACATTAATGGTTTGCCTAGCAAAGAAGCTGCTTCAAGAGTCGTCCAATGGCTTGAGAAAAGTGGAAACGGGAAGAAAAAGGTAACCTCCTCTGATTTATGAGGGATTCCTCATAAGTTTGTATATCAGTTTTTGGAAAGTTGATGATCTTAAACAGAATTATGAAGATAAGTATGAAGGAAGCAATTATCATTTCTACTGCTCAGAAGATCTTACTTATTGCCAGATTTATCTTGCTTCAGGTAAATTACAAGTTAAGGGACTGGCTTTTT</genome_strand>
        <mrna_strand>CTTATCAG.............................................................................................GCTGAAGTGCCTGTCAATTGGTGTCCAGCACTTGGTACTGTCTTGGCAAATGAAGAAGTAATTGATGGTGTAAGTGAAAGAGGGGGGCATCCAGTCATCAGAAAG............................................................................................................................................CCTATGCGGCAGTGGATGTTGAGGATAACTGCTTATGCTGACCGTCTTCTTGAGGATTTAGATGACCTATACTGGCCTGAAAGTATAAAGGAAATGCAGAGGAATTGGATTGGTAGGTCAGAAGGAGCAGAATTGGATTTTGTTGTCATAAATGGTAACAGTCAGGAAGAAGAGAAAAGAATAACAGTTTATACAACAAGACCAGACACTATTTTTGGTGCAAC........................................................................................ATACTTAGTCCTTGCACCTGAGCATCCCTTTCTGTCATCACTTGTATCAGAAGCACAAAGTAAACAT.....................................................................................GTAGAGGAGTACAGGGAACATGCTTTTAGAAAGAGTGACCTTGAGAGGACTGAGCTTCAAAAGGAAAAAACAGGCGTCTTTACTGGTTGTTATGCAAAAAATCCAGCCAATGGCCAAGCTGTTCCTATTTGGGTTGCTGATTATGTCTTGGGAAG......................................................................................................................................................................................CTACGGGACAGGAGCAATAATGGCTGTGCCTGCCCATGACACACGCGACTTTGAATTTGCTATGAAGTACACTATCCCAATTTCTTGGGTTGTAAGACCAGATGATAGCAATTGTGGCAATTTTGAGAAACCATATTCAGGTGAAGGATCAATGATAAATTCATCATATTCAGAGTCAGGGCTTGACATTAATGGTTTGCCTAGCAAAGAAGCTGCTTCAAGAGTCGTCCAATGGCTTGAGAAAAGTGGAAACGGGAAGAAAAA-.................................................................................................................................................................GTAAATTACAAGTTAAGGGACTGGCTTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E737091" ref_strand="+" ref_description="SGN-E737091 [LC08BH01]">
      <seq>caaaccactgcaacttcttcactccccttctcccccatagcaatgcccatccaactccatacttctacgcgccttcatcacttgccttctcatctccttcctcgtcctcctctcctccgctctgcgcttttactccctgcctgtcgccgtcctttactgcgccgtgaattttgtaaccatgaacgcttcggagtctccaattgtacaaaaagttctagcaaaaataccgtgactgtgctagtaaatgcaattgatgggcaaaagataaatgagaaacacgagaaggtcaaaagggcttacccgtttcacgaaattgaaccaaaatggcaacattattgggaagagaataagacatttcgaacccctgatgagattgatacttccaagcccaaattctatgttcttgatatgttcccatatccaagtggagctggtttgcatgttggacatccactgggatatactgcgacagatatccttgctagatttaaacgcatgcaaggtttcaacgtattgcatccaatgggatgggatgcatttggtttacctgctgagcagtacgctattgacacaggcacacatccaaaaatcacaactttgaggaatattagtcgttttcgctcgcagcttaaatcattaggcttctcttatgattgggatcgtgagatttctacgacagaacctgattactacaaatggactcagtggatatttcttcaacttctgaagagaggactagcttatcaggctgaagtgcctgtcaattggtgtccagcacttgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="-" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="62061" stop="53880"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="61761" g_stop="61337" g_length="425"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="425" r_length="425" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="61336" i_stop="55417" i_length="5920">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="55416" g_stop="55272" g_length="145"/>
          <reference_exon_boundary r_type="cDNA" r_start="426" r_stop="570" r_length="145" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="55271" i_stop="55201" i_length="71">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.939" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="55200" g_stop="55144" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="571" r_stop="627" r_length="57" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="55143" i_stop="54428" i_length="716">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.120" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="54427" g_stop="54308" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="628" r_stop="747" r_length="120" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="54307" i_stop="54215" i_length="93">
            <donor d_prob="0.969" d_score="1.00"/>
            <acceptor a_prob="0.963" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="54214" g_stop="54180" g_length="35"/>
          <reference_exon_boundary r_type="cDNA" r_start="748" r_stop="782" r_length="35" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="-" ref_id="SGN-E737091" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>782</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E737091" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="61761" e_stop="61337"/>
          <exon e_start="55416" e_stop="55272"/>
          <exon e_start="55200" e_stop="55144"/>
          <exon e_start="54427" e_stop="54308"/>
          <exon e_start="54214" e_stop="54180"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAACCACTGCAACTTCTTCACTCCCCTTCTCCCCCATAGCAATGCCCATCCAACTCCATACTTCTACGCGCCTTCATCACTTGCCTTCTCATCTCCTTCCTCGTCCTCCTCTCCTCCGCTCTGCGCTTTTACTCCCTGCCTGTCGCCGTCCTTTACTGCGCCGTGAATTTTGTAACCATGAACGCTTCGGAGTCTCCAATTGTACAAAAAGTTCTAGCAAAAATACCGTGACTGTGCTAGTAAATGCAATTGATGGGCAAAAGATAAATGAGAAACACGAGAAGGTCAAAAGGGCTTACCCGTTTCACGAAATTGAACCAAAATGGCAACATTATTGGGAAGAGAATAAGACATTTCGAACCCCTGATGAGATTGATACTTCCAAGCCCAAATTCTATGTTCTTGATATGTTCCCATATCCAAGGTACGGACTTTTTTACTCCCACTCTTTCAACTTTAAATTGCTCTGTGCCAAGGATGGACTATGGAGTATCTTCTTTTAACGAGAAGGAAGCTCTATTGTTTATGGAGTTTTGATGAGAAGAAATCAACCTATTGGTAATGATGTGTTTGCTATACCTTGAAACGGAGAACTGTTAGATACCTACCAAATGAAAAGGTAAGTTCAATATAATATTATATGTAATGTTATATGTGAGTGAATGTTGGACCGTTAAAGTCTACCATATCCACAAGATGTGTTGCATGGATGAAATACTAAGATAAATAGAATGTGCAACTAGCACATATTGAGGATAAAACCAAAGAAGATCACTTGAGATGGTTGTTGCTATCCTATGTCAACCTCTAAAAGTACCGATATGTGGGTGTGAAACTATGGTGTTAAAAGGACTTTCGGACCCTAAATCACATCAAAGTGAGTTGTCTCGAAAGACGGACAATTTCTTGGAATCCATTCAAACCTAACGAAAGACATGACACCATGAAAGAGAAGATCTATATAAGTGATATTAGTTCGCAATATGGTTTAGTTTCAACTTGGTTTTACATCAGTTCAGACTCTTGCCTTGTGTATGTACACCATATTTTTAGGAAGTTCCTTTCTTGAAAATGGTAATGCTCTAAGCTTTACAGGATCATTAGACATAATTTGTATTTCATGTAGCATAAAAGTGGTTTAGTACGTTAGCAAAGACTCAAATTGATTACCTACTCCTTAGGTAGAGTAATAGAGGTTTATGTAAGGATTGTAAGGTTATTTTGAGTGAGAACCTCACATTTAGCATAAACTCTTGCTAATGGATGTGGAGAAGAAAAAGGAAAAAAAAAAGAACTTTGTATGACCAACCAAGGATGAAGTGGGGTAGTGGGGCTTGAGCTTGACTAAGGAAAGAATTAAGGAGTTGGGGGAGAAGTTAATGGTTATGGAGGCCTAGGAGAGTAATCGGATGCAGATAATATGTGGACAAGGAGAACTGATAATATAAGGGAGGCAATTGGAGAGGTGTTAGGAGTCGCGAAGGGTAACTTTAGGGGACCCAAGTGGTCTGATGGTGGGATGGAGAGGTCTAGGGGAAAGTGGAACCCAATAAGGTTGCTTACGTGAAGTTGGTGGAGAGCAAGAATAAAGATGCATAGAGGACTAACAAAGAGAGGTATAAGATTGTGAAAAAGAAAGCGCGGATGACGATTACAACGGTTAAAACAATAACATTAAACACTTGCATGGAGAAAAGAGGACAAAAGTGGTGCATTAAAGACAAGAATGACAATGTACTGGTGGAAGAGGCCCTCATTAAATAAAATGGCAGACGTACTTCAAAAACTCTTAAATGAGTGATTTAGAGAACACCAAAAGTAGTCAAGATTTTGGGTATTGTAAGGTATGTTAAATTTGAGAAGGTTAAAGAGGGAAATTTGTAATATAAGAGGAGGACAATGATTGGGTTAGATGAATTTCTTGCGGCATTATGGAAGAGGGCAAGCAAAGTGGGTTTGGAGTGACTACTTTTGTAGTTTAATGTCATTTGTTGGATGACTAAGATCTCATTTGTTTGTACTTAATGGAGGTCTGTATCTTAATTATTCAGATTCAGCCCATTAAGTGTGTTTGATTTTAAGGTCTGAAACTAAATGATTCAGATTCATCTCATTAAGTCCATTTGTTTCTTTCCTCAAAAGGTCTCTTAATGAACCTCAAAAGGTTTGAATGGACAAATCTGCAGGAGAGTCTTAACATTATTTAGACTTATTTCATTAGTCATAAAATAATAATGTATCGTGTCTCTCGGTCTTTGCGTAACTTTTGCTCTCACAACTACAAACTTTCTTCATTTTTTTCAATCAAACACCAATTTTTTTCTCTTGAATTGGTAAAATAATAATGTTTTTGAGTTATTGATTTTAAAAATAGTGCACCTACATTTAAAAAAATATATGCAAAAATTAGATGGACTTGGATGAGAAGAGTCATTATACAATACATATGTTAATATATTTTGTCAAAGTGTCCACTACAAAAAAACATGAATGACGTTAGATAAGGATTCTTTAGTTTTTCTTATTAGCCAAAATATATGTTAATCGCTGATAATGTGATACCTTATTTATTATTTTGAACTTTTTGATATTATATTGTGCCTATAAAATATTTTTTATTAGTGATTTTTTTATGTTATGCTTGATGATCATGATATTGTTTTAAATAAAAAAGTAATATTTTCATTGAAATGATTTTTTTATAACATTTTATTAACATAATGTTTGATTTCATATGCACATTCAGATATTGAAACAAACTGTAATCATTCTGGGTTCAAATACGGAGACCACATATTAATATTCTGATGTGTATTCATATCTAAACACCTAGCCCTTAATGCAAATCTTAATATTCAGACGTGTATTCAAATTCAGAGGTTTTAATCTCAATGAAAACAGATGAGGCCTAAGATGCCCATAGAATGAAAGTGGAGTGTAGTGATCCCATTGTACATGAACAAAGGTGATACTCAAAACTGCAATAACTATAGAGGTTTCAAATTACTAATCCACACTATGAAAGTTTGGGCGACATTCAAAATTGCTACAATTATAGAGAATCGTACAAGAGCAAGCATGATATTCAAAATTGCAACAATTGTATGAGTATCAAACTACTAAGCTGCACTATGAAACTTTAGGAGGAATGTGTTTTATTATTAGGTTCAATTTGATTCATGTTGAGGTTATACCATCTACTTTTTAAGGAGATTGTTAGAGTAGTACAAGGAGAAAAAACTAACTTATATATGGTCAGTGTTGTGAAAGGCGCTCGCCATAGCGCCTTTGGCGAATGGCGAGGCGAGGCGAGGCTGTGTTGCCATTATCCACTGAGGCGAGGCGACCTCAAATAGGCGACCCGAGGCGACGTAAATGGCGTCGCCATTTTGATTTATTTTTTTTAAAAAAGTTTTAACTTCATAATATTGGTTTTTTTTTCTATTTTCAAACTTTCATCAGACTTTCGTGTATTCCTCTTCTTCTCTTCCTCGAGTCGCTGCTGCTTCTTCTCTTCCTCAGTCGCTTCTCTCTTCTTCTCTTTCTCAGTCGCTGCTCTCTTCTTCGTCTCTTTCCCTCGAGTTGTTGCTCCATTTTTCTCTTTCTCTTTCACTCTTCATTGCTCCCTGCCTTCACTACTCTTTTTTCCCCTCTGTTTTCTTTACTCTCTGTTTTGTCCCGGATTACTGTAAAATGTTTTCTGCTTTCACTGTGTTGTGACCGTTGTCCATTATTTTTTTGAAAAAACATTAATTCTTCTATAGTAATTATTATAGTATTTGTAATATATGTAATTGCTATTGAAATTTTGAATATTATATGTGCAATTAAATGTTTTAAATTTTTGGTATTAATTGGCGCCTCGATTCAAAAAGGCGAGCGTGGCGAGGCAGACCCTTGTCGCCTCTCGCGGTCCAAAACACTGTATATGGTGTTCATCATAGAAAAGACATAAGATAGAATTATGAGGGAGGTTTCATAAAGATGCTTGAATTTTAGAATTATAACTACACCACATATGATTAAGGACATGTACAACATAATCAAGATTGTCGAGGATAGTGAGAAAAGACTAAGAACACTTTTCGGTCAAGATGGGTCTGCACTAATGGTCAACTCAGCCTTTTTTTCATTGTCTTGGTGATAGATGAACTGACACGACATATTCAAGAGGAAGTACCACGGTGTATGTTATTTGCAAATGACATAGTATTGGTCGACAAGACACACGACAAAATTAACAGTCACTCGAGATTATGGAGACACACCCTAGAGTCTAAAGGCTTCAGATGTGAAGGACTAAAGTAGAGTACATATAGTGTAAGTTCAATGTCATATCACATGAGGCAGATGGGGAAGTGAGTATTGATACACAAGTCATCCCCCAAGAGAGGAGATGGAGATTGACAAGGATGTCATTATATTTGAATGAGATAAAGGAAATGGAGGCTCACATCAGTGTCCAATGTTATAAGACTGCATGACCTGCTGTTTGGGGTGGAGTGTTGGTTAGTCAAGAACTTGCAAGTTGAGAAAACGAATGTAGTAGGAATGAGAATGCTTAGATGGATGTGTGAGCATACTAGAAGAGACAAAATTAGGAAAGAAGATGTACGAGGCAAAGTGGAAACACAAACCACTCTTTGACAGCTATGTGGCCTTGGAAACTAATCTCAAGGTGAAGATACCACAGAAAGTATCATGCTTTGTGTGGTTGGTGATTAGAAGAGCCTGTTTGACCCATGAAGTCTTACAGAGAAGAGGTATATGGATATGCCCAAGGTGTTACATGTGTGGACAAGAGGCTGAGGTAAATGGTCACCTAATTCTGCACTACAAAACAACTACAAATCTGTGGAACATGTTCTTACATATACTTAGGGTGAACTGGATAAGGTGCAGTACCACTTCTGAGGTACTGGTTCATTGGCAAGAAATAGGGAATCAAGGATCAAAGGAAGATTGGTGTAAGGGTATCCCAGCCTGCATCTGGTGGACATTGCGAAAGGAAAGAGATAAGAGATACTATAAAGGGAAAGCTAGCAACATCCAGAAGATCAAGATGAGATGTCTTAGTCCTCTATACTTTTGGTGTAAACAGTATACAGTTGGGAGATAGTTTAGTGGAATTCATAGGCAAATTGTAAAAATTGAAAGTAGATTTTTTTTATGTTACCTCCTGGGTGTTTGTAAATCCTACTTCATCAGTTTCTGATGAGTTTTTTGTGTGAATACAAAAGTTACCTAAAGAACTATATATTGCTATAGTATCAAACCAACCCAGTCGAAGGATCAACACCAGAAGAGAAATAACTTTACTAGCTTAAAGCTCCAAATGGTAAAACGAGAATGTATATCTTATCTCATTTGCCACTTCCAATTCTATGCTTGGGCTTCTATATCAAGTATCAAATCACTCGTGTATAGCATGAGGTGCACAGGAAAAATTTCAAGAACCTAGTTTAACCACCATCTTGTTGCAGAAGCACAAATTATGTTTAAGTAAAAAACAGCACCCCAAAATTTATGTGAACTTGCAAGAATAAACACTTGAAGGCACTCCTTCGAACAACCAAGAGTCCTGGCTTACATCCAATTTGATCAGTTTTAAGAACTAAATAAGACCAAATAATCTTTTGAAAATGAATTTTAAATATCTAAAAAATCATGTATGGAAATCAGTAAATTGCACATATTGACAAAAATGTATTTCTGTTCCAAAAAATATAAGTACTGCCATTGGATATAGTGAAACAACTCTTTCTTGGACTCTGTTTTTTGGTTTTTCCAAGTACTTCGAAATATTATTGTAAAGAAATAGATCTTGGGCTTAGCTCAACCCAAAAATAGCTCATGAGGTGAGGATTGCCCAAAATCATACAAGAAAACCAATTGCCCATCCCATAACCAATGTGAAACTTTTAACCCTCCCTCCTCCCTCCTCGCAGTATAAGACTGAACATCTAGAGCATGGGCTATACAATATGGACAGATCACGGATGCTATTTTGATAGCAAATGAATGTGTGGTACAAGGAAGAAAAGCAGGAGGATATGAATATTATACGAGCTAGACATAGAGGCCTATGACCTCTCAACTTGGAAATTCTATGGAAGACATGGGAGAAAAAGGGCTTTGGCAGCAGATGGATAGCTGGATCAAGTGCCCATTTTAGAAAAGGTTTTCGTAGAAGTGTTCTGCCCATGTTCAAAATTTGCAGTCAGTTATTTAAAAGAGTTTTATGGTGGATAGTTGCCAATCCATTGTGAGCTATGGCAATTGCCTTTGTAATCAATTGATCGCAACCTGCTAAATTTGCTTTGGTGCTTTATTCATCCATGCAGTGGAGCTGGTTTGCATGTTGGACATCCACTGGGATATACTGCGACAGATATCCTTGCTAGATTTAAACGCATGCAAGGTTTCAACGTATTGCATCCAATGGGATGGGATGCATTTGGTTTACCTGCTGAGCAGTACGCTATTGACGTAAGTTTGCATAAGTCACTGCTTTTAATTTAATATTGCAGGTATCTAAGTTTTTACCTTTCCTTTGACAGACAGGCACACATCCAAAAATCACAACTTTGAGGAATATTAGTCGTTTTCGCTCGCAGGTAACTTTCTTTTCTTTTGATGACTATATTCCGTGTTTACATTGAGGCTTTTAATCCTTTCCAAAAATTCTGAATTTTTAGCCATGAAATCAAAACCCTAAGTTTGTTATTTGCATTCCTAGTTCAAGAATCAAGTGTTCATTTAGGTGACAGTAGACTTTGAGCTACTTTTTGTATGTATGTGTGATGTTTCAGTTTAATTGAGACTTGGCAAATCCACAGAATATCTGTTTTTCATTTGGCAGAGCACTGAAGGAGAATTTAGCCTTTTCATGATAGTGTAATTCGTACATGGTTTTTAAGGTCTGAAACAGTAAAAAGTCCTCTATCAAAGTAACTATTCAGGTGAACCATCATTCGTAAATTCAGGTCTTGGTCACTTGGCCCTGTTTTTTTAAAAATGATAGCAACTACATATTTTGCAACTCTCCATCCATGAGCCTGCTGTCTTGCCCACCATCTGTTAGTTCTGTTACTTTTCCTCCAATTCCTTGCTGGTTCAATTTCAGCTGATATTTGTATGTCCATATGCTCTAATACCTGTAAGAAAAGGACGGTTTCCCTGCAAAACTCAGGGCATTTAAATAGTCATTGTTGGAGTTTATGTGCTAATCTATGTAACAAGAATGTTTCATGATTTGATCTTTTGCTATCCTTCATAGTATAGAATGGTGCTTCAAAAATATCACTTTGCTAATATCTATATTGATTTCTAGCTTAAATCATTAGGCTTCTCTTATGATTGGGATCGTGAGATTTCTACGACAGAACCTGATTACTACAAATGGACTCAGTGGATATTTCTTCAACTTCTGAAGAGAGGACTAGCTTATCAGGTTTGAAGTTTTCTGAATTTCATTTTTATTATGGCAATGGTAGGTTGAAGTGACCCTCTTCGACTTATCAATGTTCTTTGAATCCAATATTAGGCTGAAGTGCCTGTCAATTGGTGTCCAGCACTTGG</genome_strand>
        <mrna_strand>CAAACCACTGCAACTTCTTCACTCCCCTTCTCCCCCATAGCAATGCCCATCCAACTCCATACTTCTACGCGCCTTCATCACTTGCCTTCTCATCTCCTTCCTCGTCCTCCTCTCCTCCGCTCTGCGCTTTTACTCCCTGCCTGTCGCCGTCCTTTACTGCGCCGTGAATTTTGTAACCATGAACGCTTCGGAGTCTCCAATTGTACAAAAAGTTCTAGCAAAAATACCGTGACTGTGCTAGTAAATGCAATTGATGGGCAAAAGATAAATGAGAAACACGAGAAGGTCAAAAGGGCTTACCCGTTTCACGAAATTGAACCAAAATGGCAACATTATTGGGAAGAGAATAAGACATTTCGAACCCCTGATGAGATTGATACTTCCAAGCCCAAATTCTATGTTCTTGATATGTTCCCATATCCAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAGCTGGTTTGCATGTTGGACATCCACTGGGATATACTGCGACAGATATCCTTGCTAGATTTAAACGCATGCAAGGTTTCAACGTATTGCATCCAATGGGATGGGATGCATTTGGTTTACCTGCTGAGCAGTACGCTATTGAC.......................................................................ACAGGCACACATCCAAAAATCACAACTTTGAGGAATATTAGTCGTTTTCGCTCGCAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTAAATCATTAGGCTTCTCTTATGATTGGGATCGTGAGATTTCTACGACAGAACCTGATTACTACAAATGGACTCAGTGGATATTTCTTCAACTTCTGAAGAGAGGACTAGCTTATCAG.............................................................................................GCTGAAGTGCCTGTCAATTGGTGTCCAGCACTTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E438713" ref_strand="+" ref_description="SGN-E438713 [cSTA-9-G4]">
      <seq>ctcatactccctgcctatcaccgccctatactccgccgtcaatcttttaaccatgaacgcttcggagtctccaattgtacaaaaagttctagcaaaaataccgtgactttgctagtaaaagcaattgatgctcaaaagacaaatgagcaacatgagaaggtcaaaagggcttatccgtttcacgaaattgaaccaaaatggcaacattattgggaagagaataagacatttcgaacccctgatgagattgatacttccaagcccaaattctatgttcttgatatgttcccatatccaagtggagctggtttgcatgttggacatccgcttggatatactgcgacagatatccttgctagatttaaacgcatgcaaggtttcaacgtattgcatccaatgggatgggatgcatttggtttacctgctgagcaatatgctattgacacaggcacacatccaaaaatcacaactttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="-" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="61935" stop="54871"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="61635" g_stop="61337" g_length="299"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="299" r_length="299" r_score="0.940"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="61336" i_stop="55417" i_length="5920">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="55416" g_stop="55272" g_length="145"/>
          <reference_exon_boundary r_type="cDNA" r_start="300" r_stop="444" r_length="145" r_score="0.972"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="55271" i_stop="55201" i_length="71">
            <donor d_prob="0.998" d_score="0.96"/>
            <acceptor a_prob="0.939" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="55200" g_stop="55171" g_length="30"/>
          <reference_exon_boundary r_type="cDNA" r_start="445" r_stop="474" r_length="30" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="-" ref_id="SGN-E438713" ref_strand="+">
        <total_alignment_score>0.950</total_alignment_score>
        <cumulative_length_of_scored_exons>474</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E438713" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="61635" e_stop="61337"/>
          <exon e_start="55416" e_stop="55272"/>
          <exon e_start="55200" e_stop="55171"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTTACTCCCTGCCTGTCGCCGTCCTTTACTGCGCCGTGAATTTTGTAACCATGAACGCTTCGGAGTCTCCAATTGTACAAAAAGTTCTAGCAAAAATACCGTGACTGTGCTAGTAAATGCAATTGATGGGCAAAAGATAAATGAGAAACACGAGAAGGTCAAAAGGGCTTACCCGTTTCACGAAATTGAACCAAAATGGCAACATTATTGGGAAGAGAATAAGACATTTCGAACCCCTGATGAGATTGATACTTCCAAGCCCAAATTCTATGTTCTTGATATGTTCCCATATCCAAGGTACGGACTTTTTTACTCCCACTCTTTCAACTTTAAATTGCTCTGTGCCAAGGATGGACTATGGAGTATCTTCTTTTAACGAGAAGGAAGCTCTATTGTTTATGGAGTTTTGATGAGAAGAAATCAACCTATTGGTAATGATGTGTTTGCTATACCTTGAAACGGAGAACTGTTAGATACCTACCAAATGAAAAGGTAAGTTCAATATAATATTATATGTAATGTTATATGTGAGTGAATGTTGGACCGTTAAAGTCTACCATATCCACAAGATGTGTTGCATGGATGAAATACTAAGATAAATAGAATGTGCAACTAGCACATATTGAGGATAAAACCAAAGAAGATCACTTGAGATGGTTGTTGCTATCCTATGTCAACCTCTAAAAGTACCGATATGTGGGTGTGAAACTATGGTGTTAAAAGGACTTTCGGACCCTAAATCACATCAAAGTGAGTTGTCTCGAAAGACGGACAATTTCTTGGAATCCATTCAAACCTAACGAAAGACATGACACCATGAAAGAGAAGATCTATATAAGTGATATTAGTTCGCAATATGGTTTAGTTTCAACTTGGTTTTACATCAGTTCAGACTCTTGCCTTGTGTATGTACACCATATTTTTAGGAAGTTCCTTTCTTGAAAATGGTAATGCTCTAAGCTTTACAGGATCATTAGACATAATTTGTATTTCATGTAGCATAAAAGTGGTTTAGTACGTTAGCAAAGACTCAAATTGATTACCTACTCCTTAGGTAGAGTAATAGAGGTTTATGTAAGGATTGTAAGGTTATTTTGAGTGAGAACCTCACATTTAGCATAAACTCTTGCTAATGGATGTGGAGAAGAAAAAGGAAAAAAAAAAGAACTTTGTATGACCAACCAAGGATGAAGTGGGGTAGTGGGGCTTGAGCTTGACTAAGGAAAGAATTAAGGAGTTGGGGGAGAAGTTAATGGTTATGGAGGCCTAGGAGAGTAATCGGATGCAGATAATATGTGGACAAGGAGAACTGATAATATAAGGGAGGCAATTGGAGAGGTGTTAGGAGTCGCGAAGGGTAACTTTAGGGGACCCAAGTGGTCTGATGGTGGGATGGAGAGGTCTAGGGGAAAGTGGAACCCAATAAGGTTGCTTACGTGAAGTTGGTGGAGAGCAAGAATAAAGATGCATAGAGGACTAACAAAGAGAGGTATAAGATTGTGAAAAAGAAAGCGCGGATGACGATTACAACGGTTAAAACAATAACATTAAACACTTGCATGGAGAAAAGAGGACAAAAGTGGTGCATTAAAGACAAGAATGACAATGTACTGGTGGAAGAGGCCCTCATTAAATAAAATGGCAGACGTACTTCAAAAACTCTTAAATGAGTGATTTAGAGAACACCAAAAGTAGTCAAGATTTTGGGTATTGTAAGGTATGTTAAATTTGAGAAGGTTAAAGAGGGAAATTTGTAATATAAGAGGAGGACAATGATTGGGTTAGATGAATTTCTTGCGGCATTATGGAAGAGGGCAAGCAAAGTGGGTTTGGAGTGACTACTTTTGTAGTTTAATGTCATTTGTTGGATGACTAAGATCTCATTTGTTTGTACTTAATGGAGGTCTGTATCTTAATTATTCAGATTCAGCCCATTAAGTGTGTTTGATTTTAAGGTCTGAAACTAAATGATTCAGATTCATCTCATTAAGTCCATTTGTTTCTTTCCTCAAAAGGTCTCTTAATGAACCTCAAAAGGTTTGAATGGACAAATCTGCAGGAGAGTCTTAACATTATTTAGACTTATTTCATTAGTCATAAAATAATAATGTATCGTGTCTCTCGGTCTTTGCGTAACTTTTGCTCTCACAACTACAAACTTTCTTCATTTTTTTCAATCAAACACCAATTTTTTTCTCTTGAATTGGTAAAATAATAATGTTTTTGAGTTATTGATTTTAAAAATAGTGCACCTACATTTAAAAAAATATATGCAAAAATTAGATGGACTTGGATGAGAAGAGTCATTATACAATACATATGTTAATATATTTTGTCAAAGTGTCCACTACAAAAAAACATGAATGACGTTAGATAAGGATTCTTTAGTTTTTCTTATTAGCCAAAATATATGTTAATCGCTGATAATGTGATACCTTATTTATTATTTTGAACTTTTTGATATTATATTGTGCCTATAAAATATTTTTTATTAGTGATTTTTTTATGTTATGCTTGATGATCATGATATTGTTTTAAATAAAAAAGTAATATTTTCATTGAAATGATTTTTTTATAACATTTTATTAACATAATGTTTGATTTCATATGCACATTCAGATATTGAAACAAACTGTAATCATTCTGGGTTCAAATACGGAGACCACATATTAATATTCTGATGTGTATTCATATCTAAACACCTAGCCCTTAATGCAAATCTTAATATTCAGACGTGTATTCAAATTCAGAGGTTTTAATCTCAATGAAAACAGATGAGGCCTAAGATGCCCATAGAATGAAAGTGGAGTGTAGTGATCCCATTGTACATGAACAAAGGTGATACTCAAAACTGCAATAACTATAGAGGTTTCAAATTACTAATCCACACTATGAAAGTTTGGGCGACATTCAAAATTGCTACAATTATAGAGAATCGTACAAGAGCAAGCATGATATTCAAAATTGCAACAATTGTATGAGTATCAAACTACTAAGCTGCACTATGAAACTTTAGGAGGAATGTGTTTTATTATTAGGTTCAATTTGATTCATGTTGAGGTTATACCATCTACTTTTTAAGGAGATTGTTAGAGTAGTACAAGGAGAAAAAACTAACTTATATATGGTCAGTGTTGTGAAAGGCGCTCGCCATAGCGCCTTTGGCGAATGGCGAGGCGAGGCGAGGCTGTGTTGCCATTATCCACTGAGGCGAGGCGACCTCAAATAGGCGACCCGAGGCGACGTAAATGGCGTCGCCATTTTGATTTATTTTTTTTAAAAAAGTTTTAACTTCATAATATTGGTTTTTTTTTCTATTTTCAAACTTTCATCAGACTTTCGTGTATTCCTCTTCTTCTCTTCCTCGAGTCGCTGCTGCTTCTTCTCTTCCTCAGTCGCTTCTCTCTTCTTCTCTTTCTCAGTCGCTGCTCTCTTCTTCGTCTCTTTCCCTCGAGTTGTTGCTCCATTTTTCTCTTTCTCTTTCACTCTTCATTGCTCCCTGCCTTCACTACTCTTTTTTCCCCTCTGTTTTCTTTACTCTCTGTTTTGTCCCGGATTACTGTAAAATGTTTTCTGCTTTCACTGTGTTGTGACCGTTGTCCATTATTTTTTTGAAAAAACATTAATTCTTCTATAGTAATTATTATAGTATTTGTAATATATGTAATTGCTATTGAAATTTTGAATATTATATGTGCAATTAAATGTTTTAAATTTTTGGTATTAATTGGCGCCTCGATTCAAAAAGGCGAGCGTGGCGAGGCAGACCCTTGTCGCCTCTCGCGGTCCAAAACACTGTATATGGTGTTCATCATAGAAAAGACATAAGATAGAATTATGAGGGAGGTTTCATAAAGATGCTTGAATTTTAGAATTATAACTACACCACATATGATTAAGGACATGTACAACATAATCAAGATTGTCGAGGATAGTGAGAAAAGACTAAGAACACTTTTCGGTCAAGATGGGTCTGCACTAATGGTCAACTCAGCCTTTTTTTCATTGTCTTGGTGATAGATGAACTGACACGACATATTCAAGAGGAAGTACCACGGTGTATGTTATTTGCAAATGACATAGTATTGGTCGACAAGACACACGACAAAATTAACAGTCACTCGAGATTATGGAGACACACCCTAGAGTCTAAAGGCTTCAGATGTGAAGGACTAAAGTAGAGTACATATAGTGTAAGTTCAATGTCATATCACATGAGGCAGATGGGGAAGTGAGTATTGATACACAAGTCATCCCCCAAGAGAGGAGATGGAGATTGACAAGGATGTCATTATATTTGAATGAGATAAAGGAAATGGAGGCTCACATCAGTGTCCAATGTTATAAGACTGCATGACCTGCTGTTTGGGGTGGAGTGTTGGTTAGTCAAGAACTTGCAAGTTGAGAAAACGAATGTAGTAGGAATGAGAATGCTTAGATGGATGTGTGAGCATACTAGAAGAGACAAAATTAGGAAAGAAGATGTACGAGGCAAAGTGGAAACACAAACCACTCTTTGACAGCTATGTGGCCTTGGAAACTAATCTCAAGGTGAAGATACCACAGAAAGTATCATGCTTTGTGTGGTTGGTGATTAGAAGAGCCTGTTTGACCCATGAAGTCTTACAGAGAAGAGGTATATGGATATGCCCAAGGTGTTACATGTGTGGACAAGAGGCTGAGGTAAATGGTCACCTAATTCTGCACTACAAAACAACTACAAATCTGTGGAACATGTTCTTACATATACTTAGGGTGAACTGGATAAGGTGCAGTACCACTTCTGAGGTACTGGTTCATTGGCAAGAAATAGGGAATCAAGGATCAAAGGAAGATTGGTGTAAGGGTATCCCAGCCTGCATCTGGTGGACATTGCGAAAGGAAAGAGATAAGAGATACTATAAAGGGAAAGCTAGCAACATCCAGAAGATCAAGATGAGATGTCTTAGTCCTCTATACTTTTGGTGTAAACAGTATACAGTTGGGAGATAGTTTAGTGGAATTCATAGGCAAATTGTAAAAATTGAAAGTAGATTTTTTTTATGTTACCTCCTGGGTGTTTGTAAATCCTACTTCATCAGTTTCTGATGAGTTTTTTGTGTGAATACAAAAGTTACCTAAAGAACTATATATTGCTATAGTATCAAACCAACCCAGTCGAAGGATCAACACCAGAAGAGAAATAACTTTACTAGCTTAAAGCTCCAAATGGTAAAACGAGAATGTATATCTTATCTCATTTGCCACTTCCAATTCTATGCTTGGGCTTCTATATCAAGTATCAAATCACTCGTGTATAGCATGAGGTGCACAGGAAAAATTTCAAGAACCTAGTTTAACCACCATCTTGTTGCAGAAGCACAAATTATGTTTAAGTAAAAAACAGCACCCCAAAATTTATGTGAACTTGCAAGAATAAACACTTGAAGGCACTCCTTCGAACAACCAAGAGTCCTGGCTTACATCCAATTTGATCAGTTTTAAGAACTAAATAAGACCAAATAATCTTTTGAAAATGAATTTTAAATATCTAAAAAATCATGTATGGAAATCAGTAAATTGCACATATTGACAAAAATGTATTTCTGTTCCAAAAAATATAAGTACTGCCATTGGATATAGTGAAACAACTCTTTCTTGGACTCTGTTTTTTGGTTTTTCCAAGTACTTCGAAATATTATTGTAAAGAAATAGATCTTGGGCTTAGCTCAACCCAAAAATAGCTCATGAGGTGAGGATTGCCCAAAATCATACAAGAAAACCAATTGCCCATCCCATAACCAATGTGAAACTTTTAACCCTCCCTCCTCCCTCCTCGCAGTATAAGACTGAACATCTAGAGCATGGGCTATACAATATGGACAGATCACGGATGCTATTTTGATAGCAAATGAATGTGTGGTACAAGGAAGAAAAGCAGGAGGATATGAATATTATACGAGCTAGACATAGAGGCCTATGACCTCTCAACTTGGAAATTCTATGGAAGACATGGGAGAAAAAGGGCTTTGGCAGCAGATGGATAGCTGGATCAAGTGCCCATTTTAGAAAAGGTTTTCGTAGAAGTGTTCTGCCCATGTTCAAAATTTGCAGTCAGTTATTTAAAAGAGTTTTATGGTGGATAGTTGCCAATCCATTGTGAGCTATGGCAATTGCCTTTGTAATCAATTGATCGCAACCTGCTAAATTTGCTTTGGTGCTTTATTCATCCATGCAGTGGAGCTGGTTTGCATGTTGGACATCCACTGGGATATACTGCGACAGATATCCTTGCTAGATTTAAACGCATGCAAGGTTTCAACGTATTGCATCCAATGGGATGGGATGCATTTGGTTTACCTGCTGAGCAGTACGCTATTGACGTAAGTTTGCATAAGTCACTGCTTTTAATTTAATATTGCAGGTATCTAAGTTTTTACCTTTCCTTTGACAGACAGGCACACATCCAAAAATCACAACTTTG</genome_strand>
        <mrna_strand>CTCATACTCCCTGCCTATCACCGCCCTATACTCCGCCGTCAATCTTTTAACCATGAACGCTTCGGAGTCTCCAATTGTACAAAAAGTTCTAGCAAAAATACCGTGACTTTGCTAGTAAAAGCAATTGATGCTCAAAAGACAAATGAGCAACATGAGAAGGTCAAAAGGGCTTATCCGTTTCACGAAATTGAACCAAAATGGCAACATTATTGGGAAGAGAATAAGACATTTCGAACCCCTGATGAGATTGATACTTCCAAGCCCAAATTCTATGTTCTTGATATGTTCCCATATCCAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAGCTGGTTTGCATGTTGGACATCCGCTTGGATATACTGCGACAGATATCCTTGCTAGATTTAAACGCATGCAAGGTTTCAACGTATTGCATCCAATGGGATGGGATGCATTTGGTTTACCTGCTGAGCAATATGCTATTGAC.......................................................................ACAGGCACACATCCAAAAATCACAACTTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E312193" ref_strand="+" ref_description="SGN-E312193 [cTOA-11-N7]">
      <seq>ggaaaagggggtggggggcttagaaggagggttttgaagcaacttttccttatcaaaaaatactcaaagatggatctagaatttgaagttaatttgtaaaattttattagattggtgtggatttttggatggattgggggatttgaatgaagttgagaacaaaaaggatgaaaggatcaaaaaacatgggtatggaagaattggaagggcttattctttcatggcaacaatggtgaagagggcctaagctgcaagaaatatgtatcaaaattgtccttggcctaacacctaaaagaacacacaatgacaatagcaataaccaaatactaactgctactgctgccaaagaaagtactgctatttctctaaactatgtatgtgagctgctccaaatctgtgacaacttggttgattgcatgaaggaccatcttctttatctgttacaccagaggatgaaacaagtcagtaagaaatggaggcttgtcttaacatagtcagattaaaataaagcattttttatatggcacctctagtttgtcttctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="+" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="63088" stop="67842"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="63388" g_stop="63610" g_length="223"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="223" r_length="223" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="63611" i_stop="67221" i_length="3611">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="67222" g_stop="67542" g_length="321"/>
          <reference_exon_boundary r_type="cDNA" r_start="224" r_stop="544" r_length="321" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="+" ref_id="SGN-E312193" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>544</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E312193" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="63388" e_stop="63610"/>
          <exon e_start="67222" e_stop="67542"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAAAAGGGGGTGGGGGGCTTAGAAGGAGGGTTTTGAAGCAACTTTTCCTTATCAAAAAATACTCAAAGATGGATCTAGAATTTGAAGTTAATTTGTAAAATTTTATTAGATTGGTGTGGATTTTTGGATGGATTGGGGGATTTGAATGAAGTTGAGAACAAAAAGGATGAAAGGATCAAAAAACATGGGTATGGAAGAATTGGAAGGGCTTATTCTTTCATGGTAAGTACTTTGTGCAAGTGTATTTTGTTGTTTTCAAATTTGACTAGCTCTTTGCAAGGTTTGCATTGTGTTTTGAAATTGTTTGTTAGTTGGCTATATAGCTTTGATTCCCAAAGACAATTGTGTTATATGAGTCTAGTTCTCGTAGAAGTTGCATCTTTACTAATTTCTTTGTTGTTTGGATTTGGATTAGTAACGTATTTAGATGCCTCCATATTGTTGGGAAGTTGTTCTCATCGCTTTTCAAACTCTAGCTTGGGCGGTCGAGTTATTGGGAGACATTTCACAAATAGGATAGGTGGTTAAATTGATTGACAAAGACTTGTTGTGGGGTGAGTGTTTGACCGAGCAGATTGAATATGAAAATTTTGATCACATATCGAATAAATTACAATCCAAAAAGATTTCAATGGAATGGATATTTAAAGTTCGATTTTGGATTGATTGATTTGGATGTTTTGGATTTGATTTTTGAGCGTTTAAGCCCGTTCATAACAACTAACTATTCCAATTCACCTAATATATTTTGCTTTTTAATTGTGATCACCTTGTTGATCATGTTGTCTAATTAGAGAGCGTGTGAGTCAGGTTTAGGAGTTTGAGGTTCTAAATTTTAAGATAGAAGAAATGAGTTTGGGGAATCTAAATTCTTGGATAGACGAGATGATGCTTCCTTTTTTTAAAAAAAGAGAAACTTTTGTTGATGGTATTGTTAAATCCACAACGTTAGTGTTTCCATGATGCCATCTTTACCACTGAGTTATCAATCAATTTTATTAGGGATTCACAAGTTATTGAATTTGCTTGAATTCATGAACCCCCACTTAGCTTATCACTGTGTCATCAATCAATTTTATTAGAAATTCACAAGTTATATATTATTCTCTAATGCAAATATAGAATCTAGAAAATGTTATTGAATTTGTCTGAACTTACCAACCTTCACTTAGCTTACCACTATGTCATGAATTAATTTTATTAGAAATTCACATGTTATATATAATTTTCTAATGCAAATACAGAGTCTATGAGAAAGTTACTAAATATGTTTGAATCTATGAATCATCACTTAGCTTTGTTTCTGCACGTAATTTCATATTGAACCTAATAATATAATGAGTTGCACATGTACCATTGGTAGGGTTGAATATAGGGTGGATCTAATGATTCAACCTAGTGATCTATTAAGTGGATTGAGAACCACGAGACTTAAAATTTAAGTTCTAGCGGAGAAAAAAATAGTAGGTGATTTCTTCTCATAAGCCTATTTGTGTTTGGTTGATACATATTGTGGAAGTGTTAGCTAGCATAAATGAGGATGTTTAAATAAATATAAGTGCATATTATGAAAGATAGGATTAGAAAAGAAACTATTCAAGAAAAGATAGGAATGATATCTGTAATAGACAAGATGAGTGATGTAACACTAAATGGTTTGGACATGAAGAATTGGCACTTCTTAGTGAACATTGGGATGCTTAAATGAATTTATGCACATATTAGGGGAGATAAGATAAGAAAAGAAACTATTTGGGATAATGTAGAGTGAGTGGCCTTGCAATGGACAAAATGAGTGAGATGACACTAAGATGATTTTGGATATATGAGGAATAAATGCTCCAACAAAAGGTGTGGTAGGCAAAAAAGTCTTGGATTAAGGTTATTAGACATGAATCACATGATTTGACACATATGTGGCTTATCAAATACAAGATTATGGATAGGAAGATATGAAGATTGACGATTAAGATTGATAGATTTTTATGTAGTTGAGGTTTGTTTGGTTCCCGGATAATTATTACTATTGTTATCTTCTCCTGGTTTTATTCTTTGGTTTTTGTGTTACCCATTGTTTATTATTGCTTCTTATTTTTTTCTTAGTTGTTTTCAACACATCTTCGTTATTATATTAGTTTTAATTTTTTATATATATTTTTTTAACTTGAGTCGAGGATCTATTGATTCAACATCAATATCTTCACAAGATGAGGTTAGATGTTTACACATCCTCTTTTCAAAACCTCATTATGGAATAACTAAAGAGGTCATTTGATAGGGTGTATACGAATATTGTTAAATAAAGTTAAATAGAGTGTACTAGTGATGTTTGCATTAGTTATGTTGAGATCATTATTTATGTATTGTTTGTTTTTTGGTGTATTAAAATAACATGGTGAAATTAAATTCTCCGTGAAGATGCAGAGTACCAACGACTAGATGATAAGACCTTGTGGACCTTAATTATAGCTTCGTAGTGACGACCTTAATTGAATATGTAGGATAGGTGGTAAGTGATGACACACAACGACCAATCCTTAAAGACCATTCTTTCTTTTAAGGATGCCTAATTGCCACATCGATCATTTAGGGAGAGGCGGGACACTGCGAGGTGGGTAATTTATTTGAGGTGAATGCTTCTTAAAGAGTGACGGGGGTGTGCGAAGGTAGGCTCAAGCTAAGATTCTGCTCATGAGCTTAATGATATAAGTCTGTAAAATCTGAAATCGACTGGTCGACAGAGATATAAGTCGGTCATAATCGAAGTATATTGTTGTTGTTGACGCGTGTACATCTTAGTTTTAGTGCACTAAATTGATTTGAAAAAATGACCAATTTTAGAGCGATAATTCAATTAATGCTTCAAATTCTATAGGACATGCATGGTTGTTTAGTTTGAAGACATCTTATTTTAAGATTAGATATGTTAGAAATAATTATCTTAGTACTTTAAGTAAATGCTTGGTTTGTTATATTAAAAATGATATGAATTGCGTAATTTCTAAAAATAAATTTGTTTAAGAATGTGTAAAATAATTATAAAGAGGTTTTATTGGGATATTATGTCACTTTAACTATTTTGTCTTAGGATTAGTTATTTCAAGACTCTTATTTCATCTAGAAACAGTAACAACTTATTTGAGTACTGATTATTAATACTATATAATAAGATATCACAAACTTCATAACCAAACAAGAGATCAATGGATACTAAAAATTTACCTCAAAAATTGTCTCATTTTATCTCACCAAACGTCTCCACACTATTTTACGATAAAATAACAATAATTTAGTTTGTGTCAAAACCCTGAATGAATGTGATCTAATAGTTGTCGAATTCACAATGTTGATCTAGAACATGCGCATTTAGTGCTGTTTCATTAATAATGATGATACAGTTACGATTAGTATAATATGTGATTTAAGTGTGTATAAGCAACGGTAATTTGCAGATAAAAATTTACTCATATTCGGTATTGACCCGTAGTTAATCAATCCATACACGTTTGTACTTTAGCTTTTTGCATGATTATAACATACAATTTACCTCGTGAAATCACTTAATTAATACTAAAATACATTTGATTTGGTATAAACTCCCTTTGCATTAGTTTCACATTTTTCTATCTAGAAATCATTTAATACCAATCAAATTCTAAATCCCTGTTAGGCTTAAAGAGTACTATAGAAAGTATTTGCATGAAATTTCACATTGTATTCCATTATGTAATCAAATGCAAAGGTTACGAGTCTCTGTATAGGAGAAGCTGCCTTTATTGCAGGAAAAGTATGATCTAAAAAAGAATGTTCCTTTAACATTTACTTTTCTACAGGCAACAATGGTGAAGAGGGCCTAAGCTGCAAGAAATATGTATCAAAATTGTCCTTGGCCTAACACCTAAAAGAACACACAAGGACAATAGCAATAACCAAATACTAACTGCTACTGCTGCCAAAGAAAGTACTGCTATTTCTCTAAGCTATGTATGTGAGCTGCTCCAAATCTGTGACAACTTGGTTGATTGCATGAAGGACCATCTTCTTTATCTGTTACACCAGAGGATGAAACAAGTCAGTAAGAAATGGAGGCTTGTCTTAACATAGTCAGATTAAAATAAAGCATTTTTTATATGGCACCTCTAGTTTGTCTTCTC</genome_strand>
        <mrna_strand>GGAAAAGGGGGTGGGGGGCTTAGAAGGAGGGTTTTGAAGCAACTTTTCCTTATCAAAAAATACTCAAAGATGGATCTAGAATTTGAAGTTAATTTGTAAAATTTTATTAGATTGGTGTGGATTTTTGGATGGATTGGGGGATTTGAATGAAGTTGAGAACAAAAAGGATGAAAGGATCAAAAAACATGGGTATGGAAGAATTGGAAGGGCTTATTCTTTCATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAATGGTGAAGAGGGCCTAAGCTGCAAGAAATATGTATCAAAATTGTCCTTGGCCTAACACCTAAAAGAACACACAATGACAATAGCAATAACCAAATACTAACTGCTACTGCTGCCAAAGAAAGTACTGCTATTTCTCTAAACTATGTATGTGAGCTGCTCCAAATCTGTGACAACTTGGTTGATTGCATGAAGGACCATCTTCTTTATCTGTTACACCAGAGGATGAAACAAGTCAGTAAGAAATGGAGGCTTGTCTTAACATAGTCAGATTAAAATAAAGCATTTTTTATATGGCACCTCTAGTTTGTCTTCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E340682" ref_strand="+" ref_description="SGN-E340682 [cTOF-1-N21]">
      <seq>gggggcttagaaggagggttttgaagcaacttttccttatcaaaaaatactcaaagatggatctagaatttgaagttaatttgtaaaattttattagattggtgtggatttttggatggattgggggatttgaatgaagttgagaacaaaaaggatgaaaggatcaaaaaacatgggtatggaagaattggaagggcttattctttcatggcaacaatggtgaagagggcctaagctgcaagaaatatgtatcaaaattgtccttggcctaacacctaaaagaacacacaaggacaatagcaataacaaaatactaactgctactgctgccaaagaaagtactgctatttctctaagctatgtatgtgagctgctccaaatctgtgacaacttggttgattgcatgaaggaccatcttctttatctgttacaccagaggatgaaacaagtcagtaagaaatggaggcttgtcttaacatagtcagattaaaataaagcattttttatatggcacctctagtttgtcttctctggccttgtggcctttcggcaatgtcctgaactcagctgtgaggcggaaacattctcgaatgttttcaggagaaacaaaatcagcagcaactttggtacacgactggaaagttgaaaacagatggttggttacttgatgaactttatcatctggattttcatggattatttaagtattgattcttaccttgagattacgcacttggtgagggca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="+" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="63101" stop="68056"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="63401" g_stop="63610" g_length="210"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="210" r_length="210" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="63611" i_stop="67221" i_length="3611">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="67222" g_stop="67756" g_length="535"/>
          <reference_exon_boundary r_type="cDNA" r_start="211" r_stop="745" r_length="535" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="+" ref_id="SGN-E340682" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>745</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E340682" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="63401" e_stop="63610"/>
          <exon e_start="67222" e_stop="67756"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGGGGCTTAGAAGGAGGGTTTTGAAGCAACTTTTCCTTATCAAAAAATACTCAAAGATGGATCTAGAATTTGAAGTTAATTTGTAAAATTTTATTAGATTGGTGTGGATTTTTGGATGGATTGGGGGATTTGAATGAAGTTGAGAACAAAAAGGATGAAAGGATCAAAAAACATGGGTATGGAAGAATTGGAAGGGCTTATTCTTTCATGGTAAGTACTTTGTGCAAGTGTATTTTGTTGTTTTCAAATTTGACTAGCTCTTTGCAAGGTTTGCATTGTGTTTTGAAATTGTTTGTTAGTTGGCTATATAGCTTTGATTCCCAAAGACAATTGTGTTATATGAGTCTAGTTCTCGTAGAAGTTGCATCTTTACTAATTTCTTTGTTGTTTGGATTTGGATTAGTAACGTATTTAGATGCCTCCATATTGTTGGGAAGTTGTTCTCATCGCTTTTCAAACTCTAGCTTGGGCGGTCGAGTTATTGGGAGACATTTCACAAATAGGATAGGTGGTTAAATTGATTGACAAAGACTTGTTGTGGGGTGAGTGTTTGACCGAGCAGATTGAATATGAAAATTTTGATCACATATCGAATAAATTACAATCCAAAAAGATTTCAATGGAATGGATATTTAAAGTTCGATTTTGGATTGATTGATTTGGATGTTTTGGATTTGATTTTTGAGCGTTTAAGCCCGTTCATAACAACTAACTATTCCAATTCACCTAATATATTTTGCTTTTTAATTGTGATCACCTTGTTGATCATGTTGTCTAATTAGAGAGCGTGTGAGTCAGGTTTAGGAGTTTGAGGTTCTAAATTTTAAGATAGAAGAAATGAGTTTGGGGAATCTAAATTCTTGGATAGACGAGATGATGCTTCCTTTTTTTAAAAAAAGAGAAACTTTTGTTGATGGTATTGTTAAATCCACAACGTTAGTGTTTCCATGATGCCATCTTTACCACTGAGTTATCAATCAATTTTATTAGGGATTCACAAGTTATTGAATTTGCTTGAATTCATGAACCCCCACTTAGCTTATCACTGTGTCATCAATCAATTTTATTAGAAATTCACAAGTTATATATTATTCTCTAATGCAAATATAGAATCTAGAAAATGTTATTGAATTTGTCTGAACTTACCAACCTTCACTTAGCTTACCACTATGTCATGAATTAATTTTATTAGAAATTCACATGTTATATATAATTTTCTAATGCAAATACAGAGTCTATGAGAAAGTTACTAAATATGTTTGAATCTATGAATCATCACTTAGCTTTGTTTCTGCACGTAATTTCATATTGAACCTAATAATATAATGAGTTGCACATGTACCATTGGTAGGGTTGAATATAGGGTGGATCTAATGATTCAACCTAGTGATCTATTAAGTGGATTGAGAACCACGAGACTTAAAATTTAAGTTCTAGCGGAGAAAAAAATAGTAGGTGATTTCTTCTCATAAGCCTATTTGTGTTTGGTTGATACATATTGTGGAAGTGTTAGCTAGCATAAATGAGGATGTTTAAATAAATATAAGTGCATATTATGAAAGATAGGATTAGAAAAGAAACTATTCAAGAAAAGATAGGAATGATATCTGTAATAGACAAGATGAGTGATGTAACACTAAATGGTTTGGACATGAAGAATTGGCACTTCTTAGTGAACATTGGGATGCTTAAATGAATTTATGCACATATTAGGGGAGATAAGATAAGAAAAGAAACTATTTGGGATAATGTAGAGTGAGTGGCCTTGCAATGGACAAAATGAGTGAGATGACACTAAGATGATTTTGGATATATGAGGAATAAATGCTCCAACAAAAGGTGTGGTAGGCAAAAAAGTCTTGGATTAAGGTTATTAGACATGAATCACATGATTTGACACATATGTGGCTTATCAAATACAAGATTATGGATAGGAAGATATGAAGATTGACGATTAAGATTGATAGATTTTTATGTAGTTGAGGTTTGTTTGGTTCCCGGATAATTATTACTATTGTTATCTTCTCCTGGTTTTATTCTTTGGTTTTTGTGTTACCCATTGTTTATTATTGCTTCTTATTTTTTTCTTAGTTGTTTTCAACACATCTTCGTTATTATATTAGTTTTAATTTTTTATATATATTTTTTTAACTTGAGTCGAGGATCTATTGATTCAACATCAATATCTTCACAAGATGAGGTTAGATGTTTACACATCCTCTTTTCAAAACCTCATTATGGAATAACTAAAGAGGTCATTTGATAGGGTGTATACGAATATTGTTAAATAAAGTTAAATAGAGTGTACTAGTGATGTTTGCATTAGTTATGTTGAGATCATTATTTATGTATTGTTTGTTTTTTGGTGTATTAAAATAACATGGTGAAATTAAATTCTCCGTGAAGATGCAGAGTACCAACGACTAGATGATAAGACCTTGTGGACCTTAATTATAGCTTCGTAGTGACGACCTTAATTGAATATGTAGGATAGGTGGTAAGTGATGACACACAACGACCAATCCTTAAAGACCATTCTTTCTTTTAAGGATGCCTAATTGCCACATCGATCATTTAGGGAGAGGCGGGACACTGCGAGGTGGGTAATTTATTTGAGGTGAATGCTTCTTAAAGAGTGACGGGGGTGTGCGAAGGTAGGCTCAAGCTAAGATTCTGCTCATGAGCTTAATGATATAAGTCTGTAAAATCTGAAATCGACTGGTCGACAGAGATATAAGTCGGTCATAATCGAAGTATATTGTTGTTGTTGACGCGTGTACATCTTAGTTTTAGTGCACTAAATTGATTTGAAAAAATGACCAATTTTAGAGCGATAATTCAATTAATGCTTCAAATTCTATAGGACATGCATGGTTGTTTAGTTTGAAGACATCTTATTTTAAGATTAGATATGTTAGAAATAATTATCTTAGTACTTTAAGTAAATGCTTGGTTTGTTATATTAAAAATGATATGAATTGCGTAATTTCTAAAAATAAATTTGTTTAAGAATGTGTAAAATAATTATAAAGAGGTTTTATTGGGATATTATGTCACTTTAACTATTTTGTCTTAGGATTAGTTATTTCAAGACTCTTATTTCATCTAGAAACAGTAACAACTTATTTGAGTACTGATTATTAATACTATATAATAAGATATCACAAACTTCATAACCAAACAAGAGATCAATGGATACTAAAAATTTACCTCAAAAATTGTCTCATTTTATCTCACCAAACGTCTCCACACTATTTTACGATAAAATAACAATAATTTAGTTTGTGTCAAAACCCTGAATGAATGTGATCTAATAGTTGTCGAATTCACAATGTTGATCTAGAACATGCGCATTTAGTGCTGTTTCATTAATAATGATGATACAGTTACGATTAGTATAATATGTGATTTAAGTGTGTATAAGCAACGGTAATTTGCAGATAAAAATTTACTCATATTCGGTATTGACCCGTAGTTAATCAATCCATACACGTTTGTACTTTAGCTTTTTGCATGATTATAACATACAATTTACCTCGTGAAATCACTTAATTAATACTAAAATACATTTGATTTGGTATAAACTCCCTTTGCATTAGTTTCACATTTTTCTATCTAGAAATCATTTAATACCAATCAAATTCTAAATCCCTGTTAGGCTTAAAGAGTACTATAGAAAGTATTTGCATGAAATTTCACATTGTATTCCATTATGTAATCAAATGCAAAGGTTACGAGTCTCTGTATAGGAGAAGCTGCCTTTATTGCAGGAAAAGTATGATCTAAAAAAGAATGTTCCTTTAACATTTACTTTTCTACAGGCAACAATGGTGAAGAGGGCCTAAGCTGCAAGAAATATGTATCAAAATTGTCCTTGGCCTAACACCTAAAAGAACACACAAGGACAATAGCAATAACCAAATACTAACTGCTACTGCTGCCAAAGAAAGTACTGCTATTTCTCTAAGCTATGTATGTGAGCTGCTCCAAATCTGTGACAACTTGGTTGATTGCATGAAGGACCATCTTCTTTATCTGTTACACCAGAGGATGAAACAAGTCAGTAAGAAATGGAGGCTTGTCTTAACATAGTCAGATTAAAATAAAGCATTTTTTATATGGCACCTCTAGTTTGTCTTCTCTGGCCTTGTGGCCTTTCGGCAATGTCCTGAACTCAGCTGTGAGGCGGAAACATTCTCGAATGTTTTCAGGAGAAACAAAATCAGCAGCAACTTTGGTACACGACTGGAAAGTTGAAAACAGATGGTTGGTTACTTGATGAACTTTATCATCTGGATTTTCATGGATTATTTAAGTATTGATTCTTACCTTGAGATTACGCACTTGGTGAGGGCA</genome_strand>
        <mrna_strand>GGGGGCTTAGAAGGAGGGTTTTGAAGCAACTTTTCCTTATCAAAAAATACTCAAAGATGGATCTAGAATTTGAAGTTAATTTGTAAAATTTTATTAGATTGGTGTGGATTTTTGGATGGATTGGGGGATTTGAATGAAGTTGAGAACAAAAAGGATGAAAGGATCAAAAAACATGGGTATGGAAGAATTGGAAGGGCTTATTCTTTCATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAATGGTGAAGAGGGCCTAAGCTGCAAGAAATATGTATCAAAATTGTCCTTGGCCTAACACCTAAAAGAACACACAAGGACAATAGCAATAACAAAATACTAACTGCTACTGCTGCCAAAGAAAGTACTGCTATTTCTCTAAGCTATGTATGTGAGCTGCTCCAAATCTGTGACAACTTGGTTGATTGCATGAAGGACCATCTTCTTTATCTGTTACACCAGAGGATGAAACAAGTCAGTAAGAAATGGAGGCTTGTCTTAACATAGTCAGATTAAAATAAAGCATTTTTTATATGGCACCTCTAGTTTGTCTTCTCTGGCCTTGTGGCCTTTCGGCAATGTCCTGAACTCAGCTGTGAGGCGGAAACATTCTCGAATGTTTTCAGGAGAAACAAAATCAGCAGCAACTTTGGTACACGACTGGAAAGTTGAAAACAGATGGTTGGTTACTTGATGAACTTTATCATCTGGATTTTCATGGATTATTTAAGTATTGATTCTTACCTTGAGATTACGCACTTGGTGAGGGCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E425123" ref_strand="-" ref_description="SGN-E425123 [STM-44-H21]">
      <seq>cggttgatcaggtttttcatccaatccatgaccagagcttctacttaactttggagcacaagagaaaactgaaggaagaattcgggattgaaccttggacattcgagcaaagacttggagaggcagttttcattcctgcaggatgccctcaccaagtgcgtaatctcaagtcgtgtaccaaagttgctgctgattttgtttctcctgaaaacattcgagaatgtttccgcctcacagctgagttcaggacattgccgaaaggccacaaggccagagaagacaaactagagataaagaagatggtcattcatgcaatcaaccaagttgtcacagatttggagcagctcacatacatagtttagagaaatagcagtactttctttagcagcagtagcagttagtatttggttgttgctatcgtccttgggtgttcttttaggtgttaggccaaggacaattttgatacatatttcttgcagcttaggccctcttcaccattgttgcctgtagaaaagtaaatgttaaaaggaacattcttttttatttcatacttttcctgcaataaaggcagcttctcctatacaaagactcgtaaccttcgcatttgattacataatgggatgtaagtgaaatttcatccccatattgatgttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="-" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="68290" stop="66771"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="67990" g_stop="67907" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="84" r_length="84" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="67906" i_stop="67816" i_length="91">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.821" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="67815" g_stop="67730" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="85" r_stop="170" r_length="86" r_score="0.977"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="67729" i_stop="67646" i_length="84">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.348" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="67645" g_stop="67526" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="171" r_stop="290" r_length="120" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="67525" i_stop="67436" i_length="90">
            <donor d_prob="0.977" d_score="1.00"/>
            <acceptor a_prob="0.926" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="67435" g_stop="67071" g_length="365"/>
          <reference_exon_boundary r_type="cDNA" r_start="291" r_stop="654" r_length="364" r_score="0.934"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="-" ref_id="SGN-E425123" ref_strand="-">
        <total_alignment_score>0.960</total_alignment_score>
        <cumulative_length_of_scored_exons>655</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E425123" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="67990" e_stop="67907"/>
          <exon e_start="67815" e_stop="67730"/>
          <exon e_start="67645" e_stop="67526"/>
          <exon e_start="67435" e_stop="67071"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGGTTGATCAGGTTTTTCATCCAATCCATGACCAGAGCTTCTACTTAACTTTGGAGCACAAGAGAAAACTGAAGGAAGAATTCGGTTAGTAATTTACCCTGTTCGTTATCTTTCCTCAATAACAAGGATCACATTTTATTTAATAAACTCAAGATGTGCACGCTTACTATTTTAGGGATTGAACCTTGGACATTTGAGCAAAGACTTGGAGAGTCAGTTTTCATTCCTGCAGGATGCCCTCACCAAGTGCGTAATCTCAAGGTAAGAATCAATACTTAAATAATCCATGAAAATCCAGATGATAAAGTTCATCAAGTAACCAACCATCTGTTTTCAACTTTCCAGTCGTGTACCAAAGTTGCTGCTGATTTTGTTTCTCCTGAAAACATTCGAGAATGTTTCCGCCTCACAGCTGAGTTCAGGACATTGCCGAAAGGCCACAAGGCCAGAGAAGACAAACTAGAGGTGCCATATAAAAAATGCTTTATTTTAATCTGACTATGTTAAGACAAGCCTCCATTTCTTACTGACTTGTTTCATCCTCTGGTGTAACAGATAAAGAAGATGGTCCTTCATGCAATCAACCAAGTTGTCACAGATTTGGAGCAGCTCACATACATAGCTTAGAGAAATAGCAGTACTTTCTTTGGCAGCAGTAGCAGTTAGTATTTGGTTATTGCTATTGTCCTTGTGTGTTCTTTTAGGTGTTAGGCCAAGGACAATTTTGATACATATTTCTTGCAGCTTAGGCCCTCTTCACCATTGTTGCCTGTAGAAAAGTAAATGTT-AAAGGAACATTCTTTTTTAGATCATACTTTTCCTGCAATAAAGGCAGCTTCTCCTATACAGAGACTCGTAACCTTTGCATTTGATTACATAATGGAATACAATGTGAAATTTCATGCAAATACTTTCTATAG</genome_strand>
        <mrna_strand>CGGTTGATCAGGTTTTTCATCCAATCCATGACCAGAGCTTCTACTTAACTTTGGAGCACAAGAGAAAACTGAAGGAAGAATTCG...........................................................................................GGATTGAACCTTGGACATTCGAGCAAAGACTTGGAGAGGCAGTTTTCATTCCTGCAGGATGCCCTCACCAAGTGCGTAATCTCAAG....................................................................................TCGTGTACCAAAGTTGCTGCTGATTTTGTTTCTCCTGAAAACATTCGAGAATGTTTCCGCCTCACAGCTGAGTTCAGGACATTGCCGAAAGGCCACAAGGCCAGAGAAGACAAACTAGAG..........................................................................................ATAAAGAAGATGGTCATTCATGCAATCAACCAAGTTGTCACAGATTTGGAGCAGCTCACATACATAGTTTAGAGAAATAGCAGTACTTTCTTTAGCAGCAGTAGCAGTTAGTATTTGGTTGTTGCTATCGTCCTTGGGTGTTCTTTTAGGTGTTAGGCCAAGGACAATTTTGATACATATTTCTTGCAGCTTAGGCCCTCTTCACCATTGTTGCCTGTAGAAAAGTAAATGTTAAAAGGAACATTCTTTTTTATTTCATACTTTTCCTGCAATAAAGGCAGCTTCTCCTATACAAAGACTCGTAACCTTCGCATTTGATTACATAATGGGATGTAA-GTGAAATTTCATCCCCATA-TTGATGTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E321149" ref_strand="+" ref_description="SGN-E321149 [cTOB-13-F13]">
      <seq>ttattctttcatggcaacaatggtgaagagggcctaagctgcaagaaatatgtatcaaaattgtccttggcctaacacctaaaagaacacacaaggacaatagcaataaccaaatactaactgctactgctgccaaagaaagtactgctatttctctaagctatgtatgtgagctgctccaaatctgtgacaacttggttgattgcatgaaggaccatcttctttatctgttacaccagaggatgaaacaagtcagtaagaaatggaggcttgtcttaacatagtcagattaaaataaagcattttttatatggcacctctagtttgtcttctctggccttgtggcctttcggcaatgtcctgaactcagctgtgaggcggaaacattctcgaatgttttcaggagaaacaaaatcagcagcaactttggtacacgactggaaagttgaaaacagatggttggttacttgatgaactttatcatctggattttcatggattattt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="+" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="66912" stop="68013"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="67222" g_stop="67713" g_length="492"/>
          <reference_exon_boundary r_type="cDNA" r_start="14" r_stop="505" r_length="492" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="+" ref_id="SGN-E321149" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>492</cumulative_length_of_scored_exons>
        <coverage percentage="0.974" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E321149" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="67222" e_stop="67713"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAACAATGGTGAAGAGGGCCTAAGCTGCAAGAAATATGTATCAAAATTGTCCTTGGCCTAACACCTAAAAGAACACACAAGGACAATAGCAATAACCAAATACTAACTGCTACTGCTGCCAAAGAAAGTACTGCTATTTCTCTAAGCTATGTATGTGAGCTGCTCCAAATCTGTGACAACTTGGTTGATTGCATGAAGGACCATCTTCTTTATCTGTTACACCAGAGGATGAAACAAGTCAGTAAGAAATGGAGGCTTGTCTTAACATAGTCAGATTAAAATAAAGCATTTTTTATATGGCACCTCTAGTTTGTCTTCTCTGGCCTTGTGGCCTTTCGGCAATGTCCTGAACTCAGCTGTGAGGCGGAAACATTCTCGAATGTTTTCAGGAGAAACAAAATCAGCAGCAACTTTGGTACACGACTGGAAAGTTGAAAACAGATGGTTGGTTACTTGATGAACTTTATCATCTGGATTTTCATGGATTATTT</genome_strand>
        <mrna_strand>GCAACAATGGTGAAGAGGGCCTAAGCTGCAAGAAATATGTATCAAAATTGTCCTTGGCCTAACACCTAAAAGAACACACAAGGACAATAGCAATAACCAAATACTAACTGCTACTGCTGCCAAAGAAAGTACTGCTATTTCTCTAAGCTATGTATGTGAGCTGCTCCAAATCTGTGACAACTTGGTTGATTGCATGAAGGACCATCTTCTTTATCTGTTACACCAGAGGATGAAACAAGTCAGTAAGAAATGGAGGCTTGTCTTAACATAGTCAGATTAAAATAAAGCATTTTTTATATGGCACCTCTAGTTTGTCTTCTCTGGCCTTGTGGCCTTTCGGCAATGTCCTGAACTCAGCTGTGAGGCGGAAACATTCTCGAATGTTTTCAGGAGAAACAAAATCAGCAGCAACTTTGGTACACGACTGGAAAGTTGAAAACAGATGGTTGGTTACTTGATGAACTTTATCATCTGGATTTTCATGGATTATTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E707013" ref_strand="+" ref_description="SGN-E707013 [FA31DC07]">
      <seq>gttaaattaccggctggagtcataaaaccagatttgggtccaaagacatacattgcttatggtctcagcgaggaacttgggagaggggattcagtgacaaagcttcactgtgatatgtcagatgcgataaatattttgacacacacagcagagatggctataactgatgagcagcggtcggcaattgaaatagtgaaacagatgcatagagctcaggatgaaagagagcgcatcgaatgcgaggctgataaatatcctatgaagatgtctagtgacattagcagggaggagaaaacctttgatgattcagagacaactggaggtgcattgtgggacattttcagaagggaagatgtacccaagttgagtgagtatcttttaaagcatgcaaaggaatttaggcacactttctgttgtccggttgatcaggtttttcatccaatccatgaccagagcttctacttaactttggagcacaagagaaaactgaaggaagaattcgggattgaaccttggacatttgagcaaagacttggagagtcagttttcattcctgcaggatgccctcaccaagtgcgtaatctcaagtcgtgtaccaaagttgctgctgattttgtttctcctgaaaacattcgagaatgtttccgcctcacagctgagttcaggacattgccgaaaggccacaaggccagagaagacaaactagagataaagaagatggtccttcatgcaatcaaccaagttgtcacagatttggagcagctcacatacatagcttagagaaatagcagtactttctttggcagcagtagcagttagtatttggttattgctatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="-" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="69190" stop="67007"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="68890" g_stop="68765" g_length="126"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="126" r_length="126" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="68764" i_stop="68283" i_length="482">
            <donor d_prob="0.920" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="68282" g_stop="67907" g_length="376"/>
          <reference_exon_boundary r_type="cDNA" r_start="127" r_stop="502" r_length="376" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="67906" i_stop="67816" i_length="91">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.821" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="67815" g_stop="67730" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="503" r_stop="588" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="67729" i_stop="67646" i_length="84">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.348" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="67645" g_stop="67526" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="589" r_stop="708" r_length="120" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="67525" i_stop="67436" i_length="90">
            <donor d_prob="0.977" d_score="1.00"/>
            <acceptor a_prob="0.926" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="67435" g_stop="67307" g_length="129"/>
          <reference_exon_boundary r_type="cDNA" r_start="709" r_stop="837" r_length="129" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="-" ref_id="SGN-E707013" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>837</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E707013" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="68890" e_stop="68765"/>
          <exon e_start="68282" e_stop="67907"/>
          <exon e_start="67815" e_stop="67730"/>
          <exon e_start="67645" e_stop="67526"/>
          <exon e_start="67435" e_stop="67307"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTAAATTACCGGCTGGAGTCATAAAACCAGATTTGGGTCCAAAGACATACATTGCTTATGGTCTCAGCGAGGAACTTGGGAGAGGGGATTCAGTGACAAAGCTTCACTGTGATATGTCAGATGCGGTATGATTTTGACAGGACTATTGTAGTTCATTCATTTGATTTCACTTTATTCTTATGTCATGTCATTGTGAATAGCCCTGGTTAATACTTGAAATCACAATTTGGAGGATATTACCTTAGCTCACATCCAAAAACTATAACCAAATCGACAAGGACCTTGGCAAGAAGGTATCTCAATTGTAGGAAAATTCCAAAATGAGCAAAAAAAACTAAAATTTTATTTCAAATATATAGAACCACATTCGTCCAATCTCTTCTGCCTTATGGCCAGTCCTATACAATATGTTCGACAATTGTCACATTCCCGGTAAATTAATCCACATACCACAATCTAGTTTAATGTTTATTCTCACCTTGGTAGCAGTTTACTGCTTTTCCCAGTTCTGTATTCTGTCCATGATGAAGCCTGCAAAGACTGCAACCATTACTTTTTCAGGCTTATTTCATGACAAGCTAATATTTTAAAATTTTGAATTGCTCAGATAAATATTTTGACACACACAGCAGAGATGGCTATAACTGATGAGCAGCGGTCGGCAATTGAAATAGTGAAACAGATGCATAGAGCTCAGGATGAAAGAGAGCGCATCGAATGCGAGGCTGATAAATATCCTATGAAGATGTCTAGTGACATTAGCAGGGAGGAGAAAACCTTTGATGATTCAGAGACAACTGGAGGTGCATTGTGGGACATTTTCAGAAGGGAAGATGTACCCAAGTTGAGTGAGTATCTTTTAAAGCATGCAAAGGAATTTAGGCACACTTTCTGTTGTCCGGTTGATCAGGTTTTTCATCCAATCCATGACCAGAGCTTCTACTTAACTTTGGAGCACAAGAGAAAACTGAAGGAAGAATTCGGTTAGTAATTTACCCTGTTCGTTATCTTTCCTCAATAACAAGGATCACATTTTATTTAATAAACTCAAGATGTGCACGCTTACTATTTTAGGGATTGAACCTTGGACATTTGAGCAAAGACTTGGAGAGTCAGTTTTCATTCCTGCAGGATGCCCTCACCAAGTGCGTAATCTCAAGGTAAGAATCAATACTTAAATAATCCATGAAAATCCAGATGATAAAGTTCATCAAGTAACCAACCATCTGTTTTCAACTTTCCAGTCGTGTACCAAAGTTGCTGCTGATTTTGTTTCTCCTGAAAACATTCGAGAATGTTTCCGCCTCACAGCTGAGTTCAGGACATTGCCGAAAGGCCACAAGGCCAGAGAAGACAAACTAGAGGTGCCATATAAAAAATGCTTTATTTTAATCTGACTATGTTAAGACAAGCCTCCATTTCTTACTGACTTGTTTCATCCTCTGGTGTAACAGATAAAGAAGATGGTCCTTCATGCAATCAACCAAGTTGTCACAGATTTGGAGCAGCTCACATACATAGCTTAGAGAAATAGCAGTACTTTCTTTGGCAGCAGTAGCAGTTAGTATTTGGTTATTGCTATT</genome_strand>
        <mrna_strand>GTTAAATTACCGGCTGGAGTCATAAAACCAGATTTGGGTCCAAAGACATACATTGCTTATGGTCTCAGCGAGGAACTTGGGAGAGGGGATTCAGTGACAAAGCTTCACTGTGATATGTCAGATGCG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAAATATTTTGACACACACAGCAGAGATGGCTATAACTGATGAGCAGCGGTCGGCAATTGAAATAGTGAAACAGATGCATAGAGCTCAGGATGAAAGAGAGCGCATCGAATGCGAGGCTGATAAATATCCTATGAAGATGTCTAGTGACATTAGCAGGGAGGAGAAAACCTTTGATGATTCAGAGACAACTGGAGGTGCATTGTGGGACATTTTCAGAAGGGAAGATGTACCCAAGTTGAGTGAGTATCTTTTAAAGCATGCAAAGGAATTTAGGCACACTTTCTGTTGTCCGGTTGATCAGGTTTTTCATCCAATCCATGACCAGAGCTTCTACTTAACTTTGGAGCACAAGAGAAAACTGAAGGAAGAATTCG...........................................................................................GGATTGAACCTTGGACATTTGAGCAAAGACTTGGAGAGTCAGTTTTCATTCCTGCAGGATGCCCTCACCAAGTGCGTAATCTCAAG....................................................................................TCGTGTACCAAAGTTGCTGCTGATTTTGTTTCTCCTGAAAACATTCGAGAATGTTTCCGCCTCACAGCTGAGTTCAGGACATTGCCGAAAGGCCACAAGGCCAGAGAAGACAAACTAGAG..........................................................................................ATAAAGAAGATGGTCCTTCATGCAATCAACCAAGTTGTCACAGATTTGGAGCAGCTCACATACATAGCTTAGAGAAATAGCAGTACTTTCTTTGGCAGCAGTAGCAGTTAGTATTTGGTTATTGCTATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E377500" ref_strand="+" ref_description="SGN-E377500 [TUS-20-L15]">
      <seq>taaaataaagcattttttatatggcacctctagtttgtcttctctggccttgtggcctttcggcaatgtcctgaactcagctgtgaggcggaaacattctcgaatgttttcaggagaaacaaaatcagcagcaactttggtacacgactggaaagttgaaaacagatggttggttacttgatgaactttatcatctggattttcatggattatttaagtattgattcttaccttgagattacgcacttggtgagggcatcctgcaggaatgaaaactgactctccaagtctttgctcaaatgtccaaggttcaatccctaaaatagtaagcgtgcacatcttgagtttattaaataaaatgtgatccttgttattgaggaaagataacgaacagggtaaattactaaccgaattcttccttcagttttctcttgtgctccaaagttaagtagaagctctggtcatggattggatgaaaaacctgatcaaccggacaacagaaagtgtgcctaaattcctttgcatgctttaaaagatactcactcaacttgggtacatcttcccttctgaaaatgtcccacaatgcacctccagttgtctctgaatcatcaaaggttttctcctccctgctaatgtcactagacatcttcataggatatttatcagcctcgcattcgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="+" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="67199" stop="68478"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="67499" g_stop="68178" g_length="680"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="680" r_length="680" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="+" ref_id="SGN-E377500" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>680</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E377500" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="67499" e_stop="68178"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAAATAAAGCATTTTTTATATGGCACCTCTAGTTTGTCTTCTCTGGCCTTGTGGCCTTTCGGCAATGTCCTGAACTCAGCTGTGAGGCGGAAACATTCTCGAATGTTTTCAGGAGAAACAAAATCAGCAGCAACTTTGGTACACGACTGGAAAGTTGAAAACAGATGGTTGGTTACTTGATGAACTTTATCATCTGGATTTTCATGGATTATTTAAGTATTGATTCTTACCTTGAGATTACGCACTTGGTGAGGGCATCCTGCAGGAATGAAAACTGACTCTCCAAGTCTTTGCTCAAATGTCCAAGGTTCAATCCCTAAAATAGTAAGCGTGCACATCTTGAGTTTATTAAATAAAATGTGATCCTTGTTATTGAGGAAAGATAACGAACAGGGTAAATTACTAACCGAATTCTTCCTTCAGTTTTCTCTTGTGCTCCAAAGTTAAGTAGAAGCTCTGGTCATGGATTGGATGAAAAACCTGATCAACCGGACAACAGAAAGTGTGCCTAAATTCCTTTGCATGCTTTAAAAGATACTCACTCAACTTGGGTACATCTTCCCTTCTGAAAATGTCCCACAATGCACCTCCAGTTGTCTCTGAATCATCAAAGGTTTTCTCCTCCCTGCTAATGTCACTAGACATCTTCATAGGATATTTATCAGCCTCGCATTCGATG</genome_strand>
        <mrna_strand>TAAAATAAAGCATTTTTTATATGGCACCTCTAGTTTGTCTTCTCTGGCCTTGTGGCCTTTCGGCAATGTCCTGAACTCAGCTGTGAGGCGGAAACATTCTCGAATGTTTTCAGGAGAAACAAAATCAGCAGCAACTTTGGTACACGACTGGAAAGTTGAAAACAGATGGTTGGTTACTTGATGAACTTTATCATCTGGATTTTCATGGATTATTTAAGTATTGATTCTTACCTTGAGATTACGCACTTGGTGAGGGCATCCTGCAGGAATGAAAACTGACTCTCCAAGTCTTTGCTCAAATGTCCAAGGTTCAATCCCTAAAATAGTAAGCGTGCACATCTTGAGTTTATTAAATAAAATGTGATCCTTGTTATTGAGGAAAGATAACGAACAGGGTAAATTACTAACCGAATTCTTCCTTCAGTTTTCTCTTGTGCTCCAAAGTTAAGTAGAAGCTCTGGTCATGGATTGGATGAAAAACCTGATCAACCGGACAACAGAAAGTGTGCCTAAATTCCTTTGCATGCTTTAAAAGATACTCACTCAACTTGGGTACATCTTCCCTTCTGAAAATGTCCCACAATGCACCTCCAGTTGTCTCTGAATCATCAAAGGTTTTCTCCTCCCTGCTAATGTCACTAGACATCTTCATAGGATATTTATCAGCCTCGCATTCGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E241814" ref_strand="+" ref_description="SGN-E241814 [cLED-27-G7]">
      <seq>taaaataaagcattttttatatggcacctctagtttgtcttctctggccttgtggcctttcggcaatgtcctgaactcagctgtgaggcggaaacattctcgaatgttttcaggagaaacaaaatcagcagcaactttggtacacgactggaaagttgaaaacagatggttggttacttgatgaactttatcatctggattttcatggattatttaagtattgattcttaccttgagattacgcacttggtgagggcatcctgcaggaatgaaaactgactctccaagtctttgctcaaatgtccaaggttcaatccctaaaatagtaagcgtgcacatcttgagtttattaaataaaatgtgatccttgttattgaggaaagataacgaacagggtaaattactaaccgaattcttccttcagttttctcttgtgctccaaagttaagtagaagctctggtcatggattggatgaaaaacctgatcaaccggacaacagaaagtgtgcctaaattcctttgcatgctttaaaagatactcactcaacttgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="+" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="67199" stop="68350"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="67499" g_stop="68050" g_length="552"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="552" r_length="552" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="+" ref_id="SGN-E241814" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>552</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E241814" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="67499" e_stop="68050"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAAATAAAGCATTTTTTATATGGCACCTCTAGTTTGTCTTCTCTGGCCTTGTGGCCTTTCGGCAATGTCCTGAACTCAGCTGTGAGGCGGAAACATTCTCGAATGTTTTCAGGAGAAACAAAATCAGCAGCAACTTTGGTACACGACTGGAAAGTTGAAAACAGATGGTTGGTTACTTGATGAACTTTATCATCTGGATTTTCATGGATTATTTAAGTATTGATTCTTACCTTGAGATTACGCACTTGGTGAGGGCATCCTGCAGGAATGAAAACTGACTCTCCAAGTCTTTGCTCAAATGTCCAAGGTTCAATCCCTAAAATAGTAAGCGTGCACATCTTGAGTTTATTAAATAAAATGTGATCCTTGTTATTGAGGAAAGATAACGAACAGGGTAAATTACTAACCGAATTCTTCCTTCAGTTTTCTCTTGTGCTCCAAAGTTAAGTAGAAGCTCTGGTCATGGATTGGATGAAAAACCTGATCAACCGGACAACAGAAAGTGTGCCTAAATTCCTTTGCATGCTTTAAAAGATACTCACTCAACTTGG</genome_strand>
        <mrna_strand>TAAAATAAAGCATTTTTTATATGGCACCTCTAGTTTGTCTTCTCTGGCCTTGTGGCCTTTCGGCAATGTCCTGAACTCAGCTGTGAGGCGGAAACATTCTCGAATGTTTTCAGGAGAAACAAAATCAGCAGCAACTTTGGTACACGACTGGAAAGTTGAAAACAGATGGTTGGTTACTTGATGAACTTTATCATCTGGATTTTCATGGATTATTTAAGTATTGATTCTTACCTTGAGATTACGCACTTGGTGAGGGCATCCTGCAGGAATGAAAACTGACTCTCCAAGTCTTTGCTCAAATGTCCAAGGTTCAATCCCTAAAATAGTAAGCGTGCACATCTTGAGTTTATTAAATAAAATGTGATCCTTGTTATTGAGGAAAGATAACGAACAGGGTAAATTACTAACCGAATTCTTCCTTCAGTTTTCTCTTGTGCTCCAAAGTTAAGTAGAAGCTCTGGTCATGGATTGGATGAAAAACCTGATCAACCGGACAACAGAAAGTGTGCCTAAATTCCTTTGCATGCTTTAAAAGATACTCACTCAACTTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E231879" ref_strand="+" ref_description="SGN-E231879 [cLED-7-D15]">
      <seq>taaaataaagcattttttatatggcacctctagtttgtcttctctggccttgtggcctttcggcaatgtcctgaactcagctgtgaggcggaaacattctcgaatgttttcaggagaaacaaaatcagcagcaactttggtacacgactggaaagttgaaaacagatggttggttacttgatgaactttatcatctggattttcatggattatttaagtattgattcttaccttgagattactcacttggtgagggcatcctgcaggaatgaaaactgactctccaagtctttgctcaaatgtccaaggttcaatccctaaaatagtaagcgtgcacatcttgagtttattaaataaaatgtgatccttgttattgaggaaagataacgaacagggtaaattactaaccgaattcttccttcagttttctcttgtgctccaaagttaagtagaagctctggtcatggattggatgaaaaacctgatcaaccggacaacagaaagtgtgcctaaattcctttgcatgcttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="+" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="67199" stop="68328"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="67499" g_stop="68028" g_length="530"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="530" r_length="530" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="+" ref_id="SGN-E231879" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>530</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E231879" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="67499" e_stop="68028"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAAATAAAGCATTTTTTATATGGCACCTCTAGTTTGTCTTCTCTGGCCTTGTGGCCTTTCGGCAATGTCCTGAACTCAGCTGTGAGGCGGAAACATTCTCGAATGTTTTCAGGAGAAACAAAATCAGCAGCAACTTTGGTACACGACTGGAAAGTTGAAAACAGATGGTTGGTTACTTGATGAACTTTATCATCTGGATTTTCATGGATTATTTAAGTATTGATTCTTACCTTGAGATTACGCACTTGGTGAGGGCATCCTGCAGGAATGAAAACTGACTCTCCAAGTCTTTGCTCAAATGTCCAAGGTTCAATCCCTAAAATAGTAAGCGTGCACATCTTGAGTTTATTAAATAAAATGTGATCCTTGTTATTGAGGAAAGATAACGAACAGGGTAAATTACTAACCGAATTCTTCCTTCAGTTTTCTCTTGTGCTCCAAAGTTAAGTAGAAGCTCTGGTCATGGATTGGATGAAAAACCTGATCAACCGGACAACAGAAAGTGTGCCTAAATTCCTTTGCATGCTTT</genome_strand>
        <mrna_strand>TAAAATAAAGCATTTTTTATATGGCACCTCTAGTTTGTCTTCTCTGGCCTTGTGGCCTTTCGGCAATGTCCTGAACTCAGCTGTGAGGCGGAAACATTCTCGAATGTTTTCAGGAGAAACAAAATCAGCAGCAACTTTGGTACACGACTGGAAAGTTGAAAACAGATGGTTGGTTACTTGATGAACTTTATCATCTGGATTTTCATGGATTATTTAAGTATTGATTCTTACCTTGAGATTACTCACTTGGTGAGGGCATCCTGCAGGAATGAAAACTGACTCTCCAAGTCTTTGCTCAAATGTCCAAGGTTCAATCCCTAAAATAGTAAGCGTGCACATCTTGAGTTTATTAAATAAAATGTGATCCTTGTTATTGAGGAAAGATAACGAACAGGGTAAATTACTAACCGAATTCTTCCTTCAGTTTTCTCTTGTGCTCCAAAGTTAAGTAGAAGCTCTGGTCATGGATTGGATGAAAAACCTGATCAACCGGACAACAGAAAGTGTGCCTAAATTCCTTTGCATGCTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E239678" ref_strand="+" ref_description="SGN-E239678 [cLED-33-O17]">
      <seq>taaaataaagcattttttatatggcacctctagtttgtcttctctggccttgtggcctttcggcaatgtcctgaactcagctgtgaggcggaaacattctcgaatgttttcaggagaaacaaaatcagcagcaactttggtacacgactggaaagttgaaaacagatggttggttacttgatgaactttatcatctggattttcatggattatttaagtattgattcttaccttgagattacgcacttggtgagggcatcctgcaggaatgaaaactgactctccaagtctttgctcaaatgtccaaggttcaatccctaaaatagtaagcgtgcacatcttgagtttattaaataaaatgtgatccttgctattgaggaaagataacgaacagggtaaattactaaccgaatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="+" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="67199" stop="68212"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="67499" g_stop="67912" g_length="414"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="414" r_length="414" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="+" ref_id="SGN-E239678" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>414</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E239678" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="67499" e_stop="67912"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAAATAAAGCATTTTTTATATGGCACCTCTAGTTTGTCTTCTCTGGCCTTGTGGCCTTTCGGCAATGTCCTGAACTCAGCTGTGAGGCGGAAACATTCTCGAATGTTTTCAGGAGAAACAAAATCAGCAGCAACTTTGGTACACGACTGGAAAGTTGAAAACAGATGGTTGGTTACTTGATGAACTTTATCATCTGGATTTTCATGGATTATTTAAGTATTGATTCTTACCTTGAGATTACGCACTTGGTGAGGGCATCCTGCAGGAATGAAAACTGACTCTCCAAGTCTTTGCTCAAATGTCCAAGGTTCAATCCCTAAAATAGTAAGCGTGCACATCTTGAGTTTATTAAATAAAATGTGATCCTTGTTATTGAGGAAAGATAACGAACAGGGTAAATTACTAACCGAATT</genome_strand>
        <mrna_strand>TAAAATAAAGCATTTTTTATATGGCACCTCTAGTTTGTCTTCTCTGGCCTTGTGGCCTTTCGGCAATGTCCTGAACTCAGCTGTGAGGCGGAAACATTCTCGAATGTTTTCAGGAGAAACAAAATCAGCAGCAACTTTGGTACACGACTGGAAAGTTGAAAACAGATGGTTGGTTACTTGATGAACTTTATCATCTGGATTTTCATGGATTATTTAAGTATTGATTCTTACCTTGAGATTACGCACTTGGTGAGGGCATCCTGCAGGAATGAAAACTGACTCTCCAAGTCTTTGCTCAAATGTCCAAGGTTCAATCCCTAAAATAGTAAGCGTGCACATCTTGAGTTTATTAAATAAAATGTGATCCTTGCTATTGAGGAAAGATAACGAACAGGGTAAATTACTAACCGAATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E233811" ref_strand="+" ref_description="SGN-E233811 [cLED-14-N15]">
      <seq>taaaataaagcattttttatatggcacctctagtttgtcttctctggccttggggcctttcggcaatgtcctgaactcagctgtgaggcggaaacattctcgaatgttttcaggagaaacaaaatcagcagcaactttggtacacgactggaaagttgaaaacagatggttggttacttgatgaactttatcatctggattttcatggattatttaaatattgattcttaccttgagattacgcacttggtgagggcatcctgcaggaatgaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="+" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="67199" stop="68071"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="67499" g_stop="67771" g_length="273"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="273" r_length="273" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="+" ref_id="SGN-E233811" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>273</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E233811" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="67499" e_stop="67771"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAAATAAAGCATTTTTTATATGGCACCTCTAGTTTGTCTTCTCTGGCCTTGTGGCCTTTCGGCAATGTCCTGAACTCAGCTGTGAGGCGGAAACATTCTCGAATGTTTTCAGGAGAAACAAAATCAGCAGCAACTTTGGTACACGACTGGAAAGTTGAAAACAGATGGTTGGTTACTTGATGAACTTTATCATCTGGATTTTCATGGATTATTTAAGTATTGATTCTTACCTTGAGATTACGCACTTGGTGAGGGCATCCTGCAGGAATGAA</genome_strand>
        <mrna_strand>TAAAATAAAGCATTTTTTATATGGCACCTCTAGTTTGTCTTCTCTGGCCTTGGGGCCTTTCGGCAATGTCCTGAACTCAGCTGTGAGGCGGAAACATTCTCGAATGTTTTCAGGAGAAACAAAATCAGCAGCAACTTTGGTACACGACTGGAAAGTTGAAAACAGATGGTTGGTTACTTGATGAACTTTATCATCTGGATTTTCATGGATTATTTAAATATTGATTCTTACCTTGAGATTACGCACTTGGTGAGGGCATCCTGCAGGAATGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E376723" ref_strand="+" ref_description="SGN-E376723 [TUS-19-K16]">
      <seq>cgcacaaggagagggcaaccagcaggaaagaaaacagacactccaagccggagctcaaatgtccaaggttcaatccctaaaatagtaagcgtgcacatcttgagtttattaaataaaatgtgatccttgctattgaggaaagataacgaacagggtaaattactaaccgaattcttccttcagttttctcttgtgctccaaagttaagtagaagctcttggtcatggattggatgaaaaacctgatcaaccggacaacagaaagtgtgcctaaattcctttgcatgctttaaaaaatactcactcaacttgggtacatcttcccttttgaaaatgcccacaatgcacctccaattgtctttgaatcatcaaaggtttactcctccc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="+" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="67492" stop="68425"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="67740" g_stop="68125" g_length="386"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="386" r_length="386" r_score="0.946"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="+" ref_id="SGN-E376723" ref_strand="+">
        <total_alignment_score>0.946</total_alignment_score>
        <cumulative_length_of_scored_exons>386</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E376723" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="67740" e_stop="68125"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGCACTTGGTGAGGGCATCCTGCAGGAATGAAAACTGACTCTCCAAGTCTTTGCTCAAATGTCCAAGGTTCAATCCCTAAAATAGTAAGCGTGCACATCTTGAGTTTATTAAATAAAATGTGATCCTTGTTATTGAGGAAAGATAACGAACAGGGTAAATTACTAACCGAATTCTTCCTTCAGTTTTCTCTTGTGCTCCAAAGTTAAGTAGAAGCTC-TGGTCATGGATTGGATGAAAAACCTGATCAACCGGACAACAGAAAGTGTGCCTAAATTCCTTTGCATGCTTTAAAAGATACTCACTCAACTTGGGTACATCTTCCCTTCTGAAAATGTCCCACAATGCACCTCCAGTTGTCTCTGAATCATCAAAGGTTTTCTCCTCCC</genome_strand>
        <mrna_strand>CGCACAAGGAGAGGGCAACCAGCAGGAAAGAAAACAGACACTCCAAGCCGGAGCTCAAATGTCCAAGGTTCAATCCCTAAAATAGTAAGCGTGCACATCTTGAGTTTATTAAATAAAATGTGATCCTTGCTATTGAGGAAAGATAACGAACAGGGTAAATTACTAACCGAATTCTTCCTTCAGTTTTCTCTTGTGCTCCAAAGTTAAGTAGAAGCTCTTGGTCATGGATTGGATGAAAAACCTGATCAACCGGACAACAGAAAGTGTGCCTAAATTCCTTTGCATGCTTTAAAAAATACTCACTCAACTTGGGTACATCTTCCCTTTTGAAAATG-CCCACAATGCACCTCCAATTGTCTTTGAATCATCAAAGGTTTACTCCTCCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E377499" ref_strand="+" ref_description="SGN-E377499 [TUS-20-L15](-)">
      <seq>cacatcttgagtttattaaataaaatgtgatccttgttattgaggaaagataacgaacagggtaaattactaaccgaattcttccttcagttttctcttgtgctccaaagttaagtagaagctctggtcatggattggatgaaaaacctgatcaaccggacaacagaaagtgtgcctaaattcctttgcatgctttaaaagatactcactcaacttgggtacatcttcccttctgaaaatgtcccacaatgcacctccagttgtctctgaatcatcaaaggttttctcctccctgctaatgtcactagacatcttcataggatatttatcagcctcgcattcgatgcgctctctttcatcctgagctctatgcatctgtttcactatttcaattgccgaccgctgctcatcagttatagccatctttgctgtgtgtgtcaaaatatttatttgagcaattcaaaattttaaaatattagcttgtcatgaaataagcctgaaaaagtaatggttgcagtctttgcaggcttcatcatggacagaatacagaactgggaaaagcagtaaactgctaccaaggtgagaataaacattaaactagattgtggtatgtggattaatttaccgggaatgtgacaattgtcgaacatattgtataggactggccataaggcagaagagattggacgaatgtggttctatatatttgaaataaaattttagttttttttgctcatttggaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="+" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="67533" stop="68876"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="67833" g_stop="68575" g_length="743"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="742" r_length="742" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="+" ref_id="SGN-E377499" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>743</cumulative_length_of_scored_exons>
        <coverage percentage="0.989" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E377499" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="67833" e_stop="68575"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACATCTTGAGTTTATTAAATAAAATGTGATCCTTGTTATTGAGGAAAGATAACGAACAGGGTAAATTACTAACCGAATTCTTCCTTCAGTTTTCTCTTGTGCTCCAAAGTTAAGTAGAAGCTCTGGTCATGGATTGGATGAAAAACCTGATCAACCGGACAACAGAAAGTGTGCCTAAATTCCTTTGCATGCTTTAAAAGATACTCACTCAACTTGGGTACATCTTCCCTTCTGAAAATGTCCCACAATGCACCTCCAGTTGTCTCTGAATCATCAAAGGTTTTCTCCTCCCTGCTAATGTCACTAGACATCTTCATAGGATATTTATCAGCCTCGCATTCGATGCGCTCTCTTTCATCCTGAGCTCTATGCATCTGTTTCACTATTTCAATTGCCGACCGCTGCTCATCAGTTATAGCCATCTCTGCTGTGTGTGTCAAAATATTTATCTGAGCAATTCAAAATTTTAAAATATTAGCTTGTCATGAAATAAGCCTGAAAAAGTAATGGTTGCAGTCTTTGCAGGCTTCATCATGGACAGAATACAGAACTGGGAAAAGCAGTAAACTGCTACCAAGGTGAGAATAAACATTAAACTAGATTGTGGTATGTGGATTAATTTACCGGGAATGTGACAATTGTCGAACATATTGTATAGGACTGGCCATAAGGCAGAAGAGATTGGACGAATGTGGTTCTATATATTTGAAATAAAATTTTAGTTTTTTTTGCTCATTTTGGA</genome_strand>
        <mrna_strand>CACATCTTGAGTTTATTAAATAAAATGTGATCCTTGTTATTGAGGAAAGATAACGAACAGGGTAAATTACTAACCGAATTCTTCCTTCAGTTTTCTCTTGTGCTCCAAAGTTAAGTAGAAGCTCTGGTCATGGATTGGATGAAAAACCTGATCAACCGGACAACAGAAAGTGTGCCTAAATTCCTTTGCATGCTTTAAAAGATACTCACTCAACTTGGGTACATCTTCCCTTCTGAAAATGTCCCACAATGCACCTCCAGTTGTCTCTGAATCATCAAAGGTTTTCTCCTCCCTGCTAATGTCACTAGACATCTTCATAGGATATTTATCAGCCTCGCATTCGATGCGCTCTCTTTCATCCTGAGCTCTATGCATCTGTTTCACTATTTCAATTGCCGACCGCTGCTCATCAGTTATAGCCATCTTTGCTGTGTGTGTCAAAATATTTATTTGAGCAATTCAAAATTTTAAAATATTAGCTTGTCATGAAATAAGCCTGAAAAAGTAATGGTTGCAGTCTTTGCAGGCTTCATCATGGACAGAATACAGAACTGGGAAAAGCAGTAAACTGCTACCAAGGTGAGAATAAACATTAAACTAGATTGTGGTATGTGGATTAATTTACCGGGAATGTGACAATTGTCGAACATATTGTATAGGACTGGCCATAAGGCAGAAGAGATTGGACGAATGTGGTTCTATATATTTGAAATAAAATTTTAGTTTTTTTTGCTCA-TTTGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E453895" ref_strand="+" ref_description="SGN-E453895 [cSTS-21-B21]">
      <seq>catgcacggtggagatgcagagcctgaaagttctgatgatatggaaattccacaggaccagaacaaaccaattacttgggttgctaattatgatggtaatatcatgtgtgctcctgtagcaattggtggatgtggaaattttgtattagagctcaagcatctgctaccgaaaaactggatatcaaccttggaggcaaaagcagaaaggattctgattcagtgcaatttttccgagatgatttcccagccgatttgtagaatggatgaccctgaactgttacacagagcggcttcaagagttggttctgatgataactacttgtatttccctactgcaaaggacgcaatggaggatgatgcacttttacactttcgtaggcactgggccaagggtgaaccagtgattgtacaaaatgttcttgcacatacaagtggtttaagctgggaaccaatggttatgtggcgtgcattatgtgagggcactgattcaaaaatccttacaagtatgtcagaagtgaaagctatcgactgtctggctgattgtcaggttccaatcaatactcgaaagttttttaaaggttatacagaaggcangaggtatgaaaatctttggcctgaaatgctcaaacttaaagattggccaccatctgacaagtttgagaatctcttgcctcggcactgcgatgaattcatcagttcattacca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="-" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="70201" stop="68636"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="69901" g_stop="69355" g_length="547"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="547" r_length="547" r_score="0.951"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="69354" i_stop="69095" i_length="260">
            <donor d_prob="0.833" d_score="0.94"/>
            <acceptor a_prob="0.988" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="69094" g_stop="68936" g_length="159"/>
          <reference_exon_boundary r_type="cDNA" r_start="548" r_stop="706" r_length="159" r_score="0.950"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="-" ref_id="SGN-E453895" ref_strand="+">
        <total_alignment_score>0.950</total_alignment_score>
        <cumulative_length_of_scored_exons>706</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E453895" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="69901" e_stop="69355"/>
          <exon e_start="69094" e_stop="68936"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATGCACGGTGGAGACGCAGAGCCTGAACGTTATGATGATATGGAAATTCCACAGGACCAGAACAAACCAATTACTTGGGTTACTAATTATGATGGTAATATCATGTGTGCTCCTGAAGCAATTGGTGGTTGTGGAAATTTTGTACTAGAGCTCAAGCACCTGCTACCAAAAAACTGGATATCAACCTTGGAAGCAAAAGCAGAAAGGATTCTGATTCAATGCAATTTCTCCGAGATTATTTCCCAGCCGATTTGTAGAACGGATGACCCTGAACAGTTACACAGAGCGGCTTCAAGAGTTGGTTCTGATGACAACTACTTGTATTTCCCTACTGCAAAGGACGCAATAAAGGATGATGCACTTTTACACTTTCGTAGACACTGGGCCAAAGGTGAACCAGTGATTGTGCAAAATGTTCTTGCACATACAAGTGGTTTAAGCTGGGAACCAATGGTTATGTGGCGTGCATTGTGTGAGGGCACTGATTCCAAGATCCTTACAAGTATGTCGGAAGTGAAAGCTATCGACTGTCTGGCCAATTGTCAGGTTTTTCCTCATTCGTCTGCATTTTCTACCTTGTCCACAAGCTTAGTACCTTTCTCATTCCACTTATTCATCATCCCTCTCCCCATTCACTTGGTAGTTACCATGTTTTCTAATGGGTTTGTTTTGCTACTAGTATCCTTTTATTAAAGAAATTTTTTTTCTCGTATTTAAGCATTGCTTCTTGAATAGCTTCATGGTGTTATTAAAATATGATCATCTGCCATTGTGCTAAATCATCAAATAACATAAAACTTTTGCAGGTTCCGATCAATACTCGAAAATTTTTTAAAGGTTATACGGAAGGCAGAAGGTATGAAAATCTTTGGCCTGAAATGCTCAAACTTAAAGATTGGCCACCATCTGACAAGTTTGAGAAAGTCTTGCCTCGGCACTGCGATGAATTCATCAGTGCATTACCA</genome_strand>
        <mrna_strand>CATGCACGGTGGAGATGCAGAGCCTGAAAGTTCTGATGATATGGAAATTCCACAGGACCAGAACAAACCAATTACTTGGGTTGCTAATTATGATGGTAATATCATGTGTGCTCCTGTAGCAATTGGTGGATGTGGAAATTTTGTATTAGAGCTCAAGCATCTGCTACCGAAAAACTGGATATCAACCTTGGAGGCAAAAGCAGAAAGGATTCTGATTCAGTGCAATTTTTCCGAGATGATTTCCCAGCCGATTTGTAGAATGGATGACCCTGAACTGTTACACAGAGCGGCTTCAAGAGTTGGTTCTGATGATAACTACTTGTATTTCCCTACTGCAAAGGACGCAATGGAGGATGATGCACTTTTACACTTTCGTAGGCACTGGGCCAAGGGTGAACCAGTGATTGTACAAAATGTTCTTGCACATACAAGTGGTTTAAGCTGGGAACCAATGGTTATGTGGCGTGCATTATGTGAGGGCACTGATTCAAAAATCCTTACAAGTATGTCAGAAGTGAAAGCTATCGACTGTCTGGCTGATTGTCAG....................................................................................................................................................................................................................................................................GTTCCAATCAATACTCGAAAGTTTTTTAAAGGTTATACAGAAGGCANGAGGTATGAAAATCTTTGGCCTGAAATGCTCAAACTTAAAGATTGGCCACCATCTGACAAGTTTGAGAATCTCTTGCCTCGGCACTGCGATGAATTCATCAGTTCATTACCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E425122" ref_strand="+" ref_description="SGN-E425122 [STM-44-H21]">
      <seq>catgcacggtggagatgcagagcctgaaagttctgatgatatggaaattccacaggaccagaacaaaccaattacttgggttgctaattatgatggtaatatcatgtgtgctcctgtagcaattggtggatgtggaaattttgtattagagctcaagcatctgctaccgaaaaactggatatcaaccttggaggcaaaagcagaaaggattctgattcagtgcaatttttccgagatgatttcccagccgatttgtagaatggatgaccctgaactgttacacagagcggcttcaagagttggttctgatgataactacttgtatttccctactgcaaaggacgcaatggaggatgatgcacttttacactttcgtaggcactgggccaagggtgaaccagtgattgtacaaaatgttcttgcacatacaagtggtttaagctgggaaccaatggttatgtggcgtgcattatgtgagggcactgattcaaaaatccttacaagtatgtcagaagtgaaagctatcgactgtctggctgattgtcaggttccaatcaatactcgaaagttttttnaaggttatacagaaggcangaggtatgaaaatctttggcctgaaatgctcaaacttaaagattggccaccatctgancagtttgagaatctcttgcctcggcactgcgatgaattcatcagttcattac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="-" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="70201" stop="68638"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="69901" g_stop="69355" g_length="547"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="547" r_length="547" r_score="0.951"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="69354" i_stop="69095" i_length="260">
            <donor d_prob="0.833" d_score="0.94"/>
            <acceptor a_prob="0.988" a_score="0.88"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="69094" g_stop="68938" g_length="157"/>
          <reference_exon_boundary r_type="cDNA" r_start="548" r_stop="704" r_length="157" r_score="0.930"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="-" ref_id="SGN-E425122" ref_strand="+">
        <total_alignment_score>0.946</total_alignment_score>
        <cumulative_length_of_scored_exons>704</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E425122" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="69901" e_stop="69355"/>
          <exon e_start="69094" e_stop="68938"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATGCACGGTGGAGACGCAGAGCCTGAACGTTATGATGATATGGAAATTCCACAGGACCAGAACAAACCAATTACTTGGGTTACTAATTATGATGGTAATATCATGTGTGCTCCTGAAGCAATTGGTGGTTGTGGAAATTTTGTACTAGAGCTCAAGCACCTGCTACCAAAAAACTGGATATCAACCTTGGAAGCAAAAGCAGAAAGGATTCTGATTCAATGCAATTTCTCCGAGATTATTTCCCAGCCGATTTGTAGAACGGATGACCCTGAACAGTTACACAGAGCGGCTTCAAGAGTTGGTTCTGATGACAACTACTTGTATTTCCCTACTGCAAAGGACGCAATAAAGGATGATGCACTTTTACACTTTCGTAGACACTGGGCCAAAGGTGAACCAGTGATTGTGCAAAATGTTCTTGCACATACAAGTGGTTTAAGCTGGGAACCAATGGTTATGTGGCGTGCATTGTGTGAGGGCACTGATTCCAAGATCCTTACAAGTATGTCGGAAGTGAAAGCTATCGACTGTCTGGCCAATTGTCAGGTTTTTCCTCATTCGTCTGCATTTTCTACCTTGTCCACAAGCTTAGTACCTTTCTCATTCCACTTATTCATCATCCCTCTCCCCATTCACTTGGTAGTTACCATGTTTTCTAATGGGTTTGTTTTGCTACTAGTATCCTTTTATTAAAGAAATTTTTTTTCTCGTATTTAAGCATTGCTTCTTGAATAGCTTCATGGTGTTATTAAAATATGATCATCTGCCATTGTGCTAAATCATCAAATAACATAAAACTTTTGCAGGTTCCGATCAATACTCGAAAATTTTTTAAAGGTTATACGGAAGGCAGAAGGTATGAAAATCTTTGGCCTGAAATGCTCAAACTTAAAGATTGGCCACCATCTGACAAGTTTGAGAAAGTCTTGCCTCGGCACTGCGATGAATTCATCAGTGCATTAC</genome_strand>
        <mrna_strand>CATGCACGGTGGAGATGCAGAGCCTGAAAGTTCTGATGATATGGAAATTCCACAGGACCAGAACAAACCAATTACTTGGGTTGCTAATTATGATGGTAATATCATGTGTGCTCCTGTAGCAATTGGTGGATGTGGAAATTTTGTATTAGAGCTCAAGCATCTGCTACCGAAAAACTGGATATCAACCTTGGAGGCAAAAGCAGAAAGGATTCTGATTCAGTGCAATTTTTCCGAGATGATTTCCCAGCCGATTTGTAGAATGGATGACCCTGAACTGTTACACAGAGCGGCTTCAAGAGTTGGTTCTGATGATAACTACTTGTATTTCCCTACTGCAAAGGACGCAATGGAGGATGATGCACTTTTACACTTTCGTAGGCACTGGGCCAAGGGTGAACCAGTGATTGTACAAAATGTTCTTGCACATACAAGTGGTTTAAGCTGGGAACCAATGGTTATGTGGCGTGCATTATGTGAGGGCACTGATTCAAAAATCCTTACAAGTATGTCAGAAGTGAAAGCTATCGACTGTCTGGCTGATTGTCAG....................................................................................................................................................................................................................................................................GTTCCAATCAATACTCGAAAGTTTTTTNAAGGTTATACAGAAGGCANGAGGTATGAAAATCTTTGGCCTGAAATGCTCAAACTTAAAGATTGGCCACCATCTGANCAGTTTGAGAATCTCTTGCCTCGGCACTGCGATGAATTCATCAGTTCATTAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E543509" ref_strand="+" ref_description="SGN-E543509 [TUS-65-F20](-)">
      <seq>gcatatgtagtatatcgtcatcagattataaatgtttacactcaggagtacgaaagtgcagcagcattctggccagatgttcatggacgtatatttttcgcactgtgcttttctcagttatctttactaggcttgctaagtacaaaacatgctactcagtcagcacctttcctgattgcccttccagtgctgaccatctcatttcacttgtactgcaaaggtcgttatgagccagctttcaccaaatatccgatacaggaagcaaggatgagagatactctggaacaagcaagggaaccaaatcttaatctgaagggctaccttcaaaatgcttatgtgcatcctgttttcaaagacgacgatgaagatgaggatgaagactttatgatgaaactggagaacgatagcgttcttgtccccacaaaacgccagtcaagaatgaatacaccagttcccagcaaagtcagcgctggctcatctccatcacttcctgatgcagttactcatgaacattaaacagcttagaatgataggttggaatatttcacctcctttgtgcatgagagttagatcgcggagactcaaccttaactaagttgtacagagagcacttcaacacatcatagttgagctggctggaccagtttacattgggacggttggcgttgaaagtacaaaaaattgtaaagagctccggtggtagcattagaagttttgtacacttaaggatgttcatatttttagcatttgctggttgttgacactcaggatataatcttgtacacgagctttctaagggaatgtatttatttttatcgaaaagaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="-" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="83953" stop="81421"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="83653" g_stop="83630" g_length="24"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="24" r_length="24" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="83629" i_stop="82647" i_length="983">
            <donor d_prob="0.998" d_score="0.00"/>
            <acceptor a_prob="0.720" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82646" g_stop="82413" g_length="234"/>
          <reference_exon_boundary r_type="cDNA" r_start="25" r_stop="258" r_length="234" r_score="0.991"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="82412" i_stop="82282" i_length="131">
            <donor d_prob="0.915" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="82281" g_stop="81722" g_length="560"/>
          <reference_exon_boundary r_type="cDNA" r_start="259" r_stop="818" r_length="560" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="-" ref_id="SGN-E543509" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>818</cumulative_length_of_scored_exons>
        <coverage percentage="0.988" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E543509" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="83653" e_stop="83630"/>
          <exon e_start="82646" e_stop="82413"/>
          <exon e_start="82281" e_stop="81722"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCATATGTAGTATATCGTCATCAGGTTCGTCTTCTCTCTTCCTTCTTATGCCTATATTTTCTGCAGAATCCCTAAAACGATTGGTGTCGCAGTTCCTATGAAAGCATCCTTCTTCATAACCTACATAATGTGGGGGGAATTGAATGTGGCAAAATAAGGTCATTGAGAATTTAAATACGGGAAATTCTGATAAAAGATGTATAGAAGATTTACTTAAGCCAAGAAAACAAAATAGATTCTTAATTAGTTACACCATTCGCATGAAAGGATAATAAAACATGATACTTATTGAATAAAATATCTATGTGATAAAATAAGCAAAAATTTGATTACTTCCTATGTGTCAATTTGTTTGTCTTACTTTCTCCTTTTAGTTTCTTTTAAAAAGAAGGTGACTTCTCTAGTTTTGACAACACTTTAATTTTAGTATCCCACATGGCATGTTTAAGATCATAAGATTAGAGGGATGATACACATTTTTATGTTTATGACCACAAGATTCAAAGATCTTATTTACTTTCTTAAACTCCGTGACAAGTCAAAATAAGACAAATAAATTGAAACGGATGACACTTCATTGTACTTGTAACGATTATGGTGTCAGTACAAAGTTGATAGCCTTTGAAGTAGTTATGTAGGCCCTACTTCTACTTAGTTGACATGCTAGGGATAACATCAGCTTTGATATTGGATCAGACATGGAATCCCATTGGTTCAAGTGTATGTTATGTTCATAGGAGTGTCGTTTTAATGTTGTTTCTTAGGCCACATGCAACACTTCATTGACTGGGGTATTTGCTAACTGGTAGTATTAATTCTTTCCACATTTAAAAATTAGACAAAGGGAATATGGAGTACTTGTACTGATGGAGATGCACCTATTAATTCCTAGTAAAATTTGTTGTCACCTATTTGCATATGCTAATTCTACTGATTTGAAATTGTTGATGTAGACATGGTTGCATGTTACAATTAGCGTTTTCTGACGCATTCTTTTCCTGAGACAGATTATAAATGTTTACAATCAGGAGTACGAAAGTGCAGCAGCATTCTGGCCAGATGTTCATGGACGTATAATTTTCGCACTGTGCTTTTCTCAGTTATCTTTACTAGGCTTGCTAAGTACAAAACATGCTACTCAGTCAGCACCTTTCCTGATTGCCCTTCCAGTGCTGACCATCTCATTTCACTTGTACTGCAAAGGTCGTTATGAGCCAGCTTTCACCAAATATCCGATACAGGTGTGTGTGGAAGTACATCTTGCAAATAAAAATTTCCACTGTTACAATAGTTTGAGCTCTCTTTTTTTTTTGTGAGGGTCCATTTTTTTTTTCTTCAAATGTCTACAATGCTATCTTCTTCTCTATTTCAGGAAGCAAGGATGAGAGATACTCTGGAACAAGCAAGGGAACCAAATCTTAATCTGAAGGGCTACCTTCAAAATGCTTATGTGCATCCTGTTTTCAAAGACGACGATGAAGATGAGGATGAAGACTTTATGATGAAACTGGAGAACGATAGCGTTCTTGTCCCCACAAAACGCCAGTCAAGAATGAATACACCAGTTCCCAGCAAAGTCAGCGCTGGCTCATCTCCATCACTTCCTGATGCAGTTACTCATGAACATTAAACAGCTTAGAATGATAGGTTGGAATATTTCACCTCCTTTGTGCATGAGAGTTAGATCGCGGAGACTCAACCTTAACTAAGTTGTACAGAGAGCACTTCAACACATCATAGTTGAGCTGGCTGGACCAGTTTACATTGGGACGGTTGGCGTTGAAAGTACAAAAAATTGTAAAGAGCTCCGGTGGTAGCATTAGAAGTTTTGTACACTTAAGGATGTTCATATTTTTAGCATTTGCTGGTTGTTGACACTCAGGATATAATCTTGTACACGAGCTTTCTAAGGGAATGTATTTATTTTTATCG</genome_strand>
        <mrna_strand>GCATATGTAGTATATCGTCATCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTATAAATGTTTACACTCAGGAGTACGAAAGTGCAGCAGCATTCTGGCCAGATGTTCATGGACGTATATTTTTCGCACTGTGCTTTTCTCAGTTATCTTTACTAGGCTTGCTAAGTACAAAACATGCTACTCAGTCAGCACCTTTCCTGATTGCCCTTCCAGTGCTGACCATCTCATTTCACTTGTACTGCAAAGGTCGTTATGAGCCAGCTTTCACCAAATATCCGATACAG...................................................................................................................................GAAGCAAGGATGAGAGATACTCTGGAACAAGCAAGGGAACCAAATCTTAATCTGAAGGGCTACCTTCAAAATGCTTATGTGCATCCTGTTTTCAAAGACGACGATGAAGATGAGGATGAAGACTTTATGATGAAACTGGAGAACGATAGCGTTCTTGTCCCCACAAAACGCCAGTCAAGAATGAATACACCAGTTCCCAGCAAAGTCAGCGCTGGCTCATCTCCATCACTTCCTGATGCAGTTACTCATGAACATTAAACAGCTTAGAATGATAGGTTGGAATATTTCACCTCCTTTGTGCATGAGAGTTAGATCGCGGAGACTCAACCTTAACTAAGTTGTACAGAGAGCACTTCAACACATCATAGTTGAGCTGGCTGGACCAGTTTACATTGGGACGGTTGGCGTTGAAAGTACAAAAAATTGTAAAGAGCTCCGGTGGTAGCATTAGAAGTTTTGTACACTTAAGGATGTTCATATTTTTAGCATTTGCTGGTTGTTGACACTCAGGATATAATCTTGTACACGAGCTTTCTAAGGGAATGTATTTATTTTTATCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E371141" ref_strand="+" ref_description="SGN-E371141 [TUS-28-J15](-)">
      <seq>tgtactgcaaaggtcgttatgagccagctttccccaaatatccgatacaggaagcaaggatgagagatactctggaacaagcaagggaaccaaatcttaatctgaagggctaccttcaaaatgcttatgtgcatcctgttttcaaagacgacgatgaaaatgaggatgaagactttatgatgaaactggagaacgatagcgtttttgtccccccaaaacgccagtcaagaatgaataccccagttcccagcaaagtcagcgctggctcatttccatcacttcctgatgcagttactcatgaacattaaacagcttagaatgataggttggaatatttcccctcctttgtgcatgagagttagatcgcggagactcacccttaaataagttgtacaaagagcccttcaacacatcatagttgagctggctggaccagtttacattgggacggttggcgttgaaagtacaaaaaattgtaaaaagctccggtggtagcattaaaagttttgtacacttaaggatgttcatatttttagcatttgctggttgttgacactcaggatataattttgtacccgagctttttaagggaatgtatttatttttttcgtttttttaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="-" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="82762" stop="81417"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82462" g_stop="82413" g_length="50"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="50" r_length="50" r_score="0.980"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82412" i_stop="82282" i_length="131">
            <donor d_prob="0.915" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82281" g_stop="81722" g_length="560"/>
          <reference_exon_boundary r_type="cDNA" r_start="51" r_stop="610" r_length="560" r_score="0.971"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="618" polyA_stop="648"/>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="-" ref_id="SGN-E371141" ref_strand="+">
        <total_alignment_score>0.972</total_alignment_score>
        <cumulative_length_of_scored_exons>610</cumulative_length_of_scored_exons>
        <coverage percentage="0.941" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E371141" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82462" e_stop="82413"/>
          <exon e_start="82281" e_stop="81722"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTACTGCAAAGGTCGTTATGAGCCAGCTTTCACCAAATATCCGATACAGGTGTGTGTGGAAGTACATCTTGCAAATAAAAATTTCCACTGTTACAATAGTTTGAGCTCTCTTTTTTTTTTGTGAGGGTCCATTTTTTTTTTCTTCAAATGTCTACAATGCTATCTTCTTCTCTATTTCAGGAAGCAAGGATGAGAGATACTCTGGAACAAGCAAGGGAACCAAATCTTAATCTGAAGGGCTACCTTCAAAATGCTTATGTGCATCCTGTTTTCAAAGACGACGATGAAGATGAGGATGAAGACTTTATGATGAAACTGGAGAACGATAGCGTTCTTGTCCCCACAAAACGCCAGTCAAGAATGAATACACCAGTTCCCAGCAAAGTCAGCGCTGGCTCATCTCCATCACTTCCTGATGCAGTTACTCATGAACATTAAACAGCTTAGAATGATAGGTTGGAATATTTCACCTCCTTTGTGCATGAGAGTTAGATCGCGGAGACTCAACCTTAACTAAGTTGTACAGAGAGCACTTCAACACATCATAGTTGAGCTGGCTGGACCAGTTTACATTGGGACGGTTGGCGTTGAAAGTACAAAAAATTGTAAAGAGCTCCGGTGGTAGCATTAGAAGTTTTGTACACTTAAGGATGTTCATATTTTTAGCATTTGCTGGTTGTTGACACTCAGGATATAATCTTGTACACGAGCTTTCTAAGGGAATGTATTTATTTTTATCG</genome_strand>
        <mrna_strand>TGTACTGCAAAGGTCGTTATGAGCCAGCTTTCCCCAAATATCCGATACAG...................................................................................................................................GAAGCAAGGATGAGAGATACTCTGGAACAAGCAAGGGAACCAAATCTTAATCTGAAGGGCTACCTTCAAAATGCTTATGTGCATCCTGTTTTCAAAGACGACGATGAAAATGAGGATGAAGACTTTATGATGAAACTGGAGAACGATAGCGTTTTTGTCCCCCCAAAACGCCAGTCAAGAATGAATACCCCAGTTCCCAGCAAAGTCAGCGCTGGCTCATTTCCATCACTTCCTGATGCAGTTACTCATGAACATTAAACAGCTTAGAATGATAGGTTGGAATATTTCCCCTCCTTTGTGCATGAGAGTTAGATCGCGGAGACTCACCCTTAAATAAGTTGTACAAAGAGCCCTTCAACACATCATAGTTGAGCTGGCTGGACCAGTTTACATTGGGACGGTTGGCGTTGAAAGTACAAAAAATTGTAAAAAGCTCCGGTGGTAGCATTAAAAGTTTTGTACACTTAAGGATGTTCATATTTTTAGCATTTGCTGGTTGTTGACACTCAGGATATAATTTTGTACCCGAGCTTTTTAAGGGAATGTATTTATTTTTTTCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E227225" ref_strand="+" ref_description="SGN-E227225 [cLEL-30-P24](-)">
      <seq>cgttcttgtccccacaaaacgccagtcaagaatgaatacgccagttcccagcaaagtcagcgctggctcatctccatcacttcctgatgcagttactcatgaacattaatcagcttagaatgataggttggaatatttcacctcctttgtgcatgagagttagatcgcggagactcaaccttaactaagttgtacagagagcacttcaacacatcatagttgagctggctggaccagtttacattgggacggttggcgttgaaagtacaaaaaattgtaaagagctccggtggtagcattagaagttttgtacacttaaggatgttcatatttttagcatttgctggttgttgacactcaggatataatcttgtacacgagctttctaagggaatgtatttatttttatcgaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="-" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="82432" stop="81421"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82132" g_stop="81722" g_length="411"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="411" r_length="411" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="412" polyA_stop="429"/>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="-" ref_id="SGN-E227225" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>411</cumulative_length_of_scored_exons>
        <coverage percentage="0.958" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E227225" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82132" e_stop="81722"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGTTCTTGTCCCCACAAAACGCCAGTCAAGAATGAATACACCAGTTCCCAGCAAAGTCAGCGCTGGCTCATCTCCATCACTTCCTGATGCAGTTACTCATGAACATTAAACAGCTTAGAATGATAGGTTGGAATATTTCACCTCCTTTGTGCATGAGAGTTAGATCGCGGAGACTCAACCTTAACTAAGTTGTACAGAGAGCACTTCAACACATCATAGTTGAGCTGGCTGGACCAGTTTACATTGGGACGGTTGGCGTTGAAAGTACAAAAAATTGTAAAGAGCTCCGGTGGTAGCATTAGAAGTTTTGTACACTTAAGGATGTTCATATTTTTAGCATTTGCTGGTTGTTGACACTCAGGATATAATCTTGTACACGAGCTTTCTAAGGGAATGTATTTATTTTTATCG</genome_strand>
        <mrna_strand>CGTTCTTGTCCCCACAAAACGCCAGTCAAGAATGAATACGCCAGTTCCCAGCAAAGTCAGCGCTGGCTCATCTCCATCACTTCCTGATGCAGTTACTCATGAACATTAATCAGCTTAGAATGATAGGTTGGAATATTTCACCTCCTTTGTGCATGAGAGTTAGATCGCGGAGACTCAACCTTAACTAAGTTGTACAGAGAGCACTTCAACACATCATAGTTGAGCTGGCTGGACCAGTTTACATTGGGACGGTTGGCGTTGAAAGTACAAAAAATTGTAAAGAGCTCCGGTGGTAGCATTAGAAGTTTTGTACACTTAAGGATGTTCATATTTTTAGCATTTGCTGGTTGTTGACACTCAGGATATAATCTTGTACACGAGCTTTCTAAGGGAATGTATTTATTTTTATCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E227428" ref_strand="+" ref_description="SGN-E227428 [cLEL-30-N20](-)">
      <seq>tcatctccatcacttcnttatgcagttactcatgaacattaaacagcttagaatgataggttggaatatttcacctcctttgtgcatgagagttagatcgcggagactcaaccttaactaagttgtacagagagcacttcaacacatcatagttgagctggctggaccagtttacattgggacggttggcgttgaaagtacaaaaaattgtaaagagctccggtggtagcattagaagttttgtacacttaaggatgttcatatttttagcatttgctggttgttgacactcaggatataatcttgtacacgagctttctaagggaatgtatttatttttatcgcaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="-" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="82365" stop="81422"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82065" g_stop="81722" g_length="344"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="344" r_length="344" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="346" polyA_stop="362"/>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="-" ref_id="SGN-E227428" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>344</cumulative_length_of_scored_exons>
        <coverage percentage="0.950" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E227428" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82065" e_stop="81722"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCATCTCCATCACTTCCTGATGCAGTTACTCATGAACATTAAACAGCTTAGAATGATAGGTTGGAATATTTCACCTCCTTTGTGCATGAGAGTTAGATCGCGGAGACTCAACCTTAACTAAGTTGTACAGAGAGCACTTCAACACATCATAGTTGAGCTGGCTGGACCAGTTTACATTGGGACGGTTGGCGTTGAAAGTACAAAAAATTGTAAAGAGCTCCGGTGGTAGCATTAGAAGTTTTGTACACTTAAGGATGTTCATATTTTTAGCATTTGCTGGTTGTTGACACTCAGGATATAATCTTGTACACGAGCTTTCTAAGGGAATGTATTTATTTTTATCG</genome_strand>
        <mrna_strand>TCATCTCCATCACTTCNTTATGCAGTTACTCATGAACATTAAACAGCTTAGAATGATAGGTTGGAATATTTCACCTCCTTTGTGCATGAGAGTTAGATCGCGGAGACTCAACCTTAACTAAGTTGTACAGAGAGCACTTCAACACATCATAGTTGAGCTGGCTGGACCAGTTTACATTGGGACGGTTGGCGTTGAAAGTACAAAAAATTGTAAAGAGCTCCGGTGGTAGCATTAGAAGTTTTGTACACTTAAGGATGTTCATATTTTTAGCATTTGCTGGTTGTTGACACTCAGGATATAATCTTGTACACGAGCTTTCTAAGGGAATGTATTTATTTTTATCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E745647" ref_strand="+" ref_description="SGN-E745647 [GI|47105223]">
      <seq>ggtgacttggtggggttttggtttattaggggttggagtttagttaaagtagaagaaaggggaaaaagtgacaactgttggcttttatggagctttgaagttattgtacttctccgatcggctattgctactctgctgctctgttatactcagcagctctgtaattggaaagagatttataatcacaactcacaatagtactagatggcgacacttggagatataggccttgcagcagcaataaatattatatctgccttgatctttcttgtggcatttgcaattttgcggctccaaccattcaatgacagagtttatttccccaaatggtatcttaaggggctgagacacagtcccacccactctggggcattcgtcgccaaatttgttaatgttgattggagagcatatataaggtttctgaactggataccagatgctctgaaaatgcctgaacctgagcttattgaccatgcagggttggactctgctgtttatttgcgcatatacttgctagggttttggactcatattgttatggcttatgccttctcattctggacctgctatgtcttaaaaactgagtatgcaaaagttgcagccatgaggttgcagtttgtcgcctctgaaaaacgtcgtcccgaccaatatacagtccttgttaggaatgttccgccagatgctgatgaatcagttagtgaatgtgtggagcactttttcctggttaaccatcaagatcattatctcatgcatcagggtgtttataatgccaacaaactggcaaaattggtgaaggagaagaagagtaagcaaaattggctcgactattaccaacttaagtactctagggatcaatcaaaacggcctatgatgaagactggtttccttggatgctttggagcaaaagtcgacgcaattgagcatcagattgctgaaattgaaagattgacaaaagagatagctgaagagaaacaaagggtagaaaaagacccaaagtctaccatgcctgcatcatttgtctccttcaaatcgcggtggggtgctgctgtttgtgcacaaacacagcaatccagaaatccaaccttgtggttgacagaatgggctccagagccacgtgatgtattttgggataacctggcaatcccctatgtttctttgacaattaggaagctcatcattgctgttgccttcttttttctgacattcttcttcatgatcccgattgcatttgtccaaacccttgccagccttgaggggattaggaagaaagcaccatttctgaaagttattattgacgaacctttcatcaaggcgttcatccaaggttttctacctgggattgctttgaagatctttctcatatttctgccaactatattgatgatgatgtccaaattcgagggctggctaagcatatcagctctagagaggaaatctgcgtctaaatactacatcttcactatcgtgaatgtgttcctcgggaacataattgcaggagctgcatttgaacaactaagtacctttctcaatcagtcggcaaaccaaatccctaaaacgattggtgtcgcagttcctatgaaagcatccttcttcataacctacataatggttgacggctgggctggtattgctggagagatcctaaggctgaagccgctaatattttaccacttgaagaactttttcttggttaagacggaaaaagatagagaagaggcaatggatcctggaagcgttggtttcaacacaggagaaccacagatacaattatatttcttattggggcttgtctatgctgtggtcacaccatttctgcttccgttcatattggtcttctttggccttgcatatgtagtatatcgtcatcagattataaatgtttacaatcaggagtacgaaagtgcagcagcattctggccagatgttcatggacgtataattttcgcactgtgcttttctcagttatctttactaggcttgctaagtacaaaacatgctactcagtcagcacctttcctgattgcccttccagtgctgaccatctcatttcacttgtactgcaaaggtcgttatgagccagctttcaccaaatatccgatacaggaagcaaggatgagagatactctggaacaagcaagggaaccaaatcttaatctgaagggctaccttcaaaatgcttatgtgcatcctgttttcaaagacgacgatgaagatgaggatgaagactttatgatgaaactggagaacgatagcgttcttgtccccacaaaacgccagtcaagaatgaatacaccagttcccagcaaagtcagcgctggctcatctccatcacttcctgatgcagttactcatgaacattaaacagcttagaatgataggttggaatatttcacctcctttgtgcatgagagttagatcgcggagactcaaccttaactaagttgtacagagagcacttcaacacatcatagttgagctggctggaccagtttacattgggacggttggcgttgaaagtacaaaaaattgtaaagagctccggtggtagcattagaagttttgtacacttaaggatgttcatatttttagcatttgctggttgttgacactcaggatataatcttgtacacgagctttctaagggaatgtatttattctaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="-" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="93989" stop="81425"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="93690" g_stop="93494" g_length="197"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="197" r_length="197" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="93493" i_stop="92676" i_length="818">
            <donor d_prob="0.919" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="92675" g_stop="92355" g_length="321"/>
          <reference_exon_boundary r_type="cDNA" r_start="198" r_stop="518" r_length="321" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="92354" i_stop="90801" i_length="1554">
            <donor d_prob="0.947" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="90800" g_stop="90665" g_length="136"/>
          <reference_exon_boundary r_type="cDNA" r_start="519" r_stop="654" r_length="136" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="90664" i_stop="89372" i_length="1293">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="89371" g_stop="89270" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="655" r_stop="756" r_length="102" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="89269" i_stop="87752" i_length="1518">
            <donor d_prob="0.953" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="87751" g_stop="87632" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="757" r_stop="876" r_length="120" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="87631" i_stop="87480" i_length="152">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="87479" g_stop="87399" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="877" r_stop="957" r_length="81" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="87398" i_stop="86565" i_length="834">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="86564" g_stop="86224" g_length="341"/>
          <reference_exon_boundary r_type="cDNA" r_start="958" r_stop="1298" r_length="341" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="86223" i_stop="85315" i_length="909">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="85314" g_stop="85069" g_length="246"/>
          <reference_exon_boundary r_type="cDNA" r_start="1299" r_stop="1544" r_length="246" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="85068" i_stop="83955" i_length="1114">
            <donor d_prob="0.916" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="83954" g_stop="83630" g_length="325"/>
          <reference_exon_boundary r_type="cDNA" r_start="1545" r_stop="1869" r_length="325" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="83629" i_stop="82647" i_length="983">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.720" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="82646" g_stop="82413" g_length="234"/>
          <reference_exon_boundary r_type="cDNA" r_start="1870" r_stop="2103" r_length="234" r_score="1.000"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="82412" i_stop="82282" i_length="131">
            <donor d_prob="0.915" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="82281" g_stop="81738" g_length="544"/>
          <reference_exon_boundary r_type="cDNA" r_start="2104" r_stop="2647" r_length="544" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="2659" polyA_stop="2674"/>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="-" ref_id="SGN-E745647" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>2647</cumulative_length_of_scored_exons>
        <coverage percentage="0.990" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E745647" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="93690" e_stop="93494"/>
          <exon e_start="92675" e_stop="92355"/>
          <exon e_start="90800" e_stop="90665"/>
          <exon e_start="89371" e_stop="89270"/>
          <exon e_start="87751" e_stop="87632"/>
          <exon e_start="87479" e_stop="87399"/>
          <exon e_start="86564" e_stop="86224"/>
          <exon e_start="85314" e_stop="85069"/>
          <exon e_start="83954" e_stop="83630"/>
          <exon e_start="82646" e_stop="82413"/>
          <exon e_start="82281" e_stop="81738"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTGACTTGGTGGGGTTTTGGTTTATTAGGGGTTGGAGTTTAGTTAAAGTAGAAGAAAGGGGAAAAAGTGACAACTGTTGGCTTTTATGGAGCTTTGAAGTTATTGTACTTCTCCGATCGGCTATTGCTACTCTGCTGCTCTGTTATACTCAGCAGCTCTGTAATTGGAAAGAGATTTATAATCACAACTCACAATAGTATGATCTTCTTTCTGCAACTGTTTTTTTTTTTAAAAAAAAGTTTTTTTTGTGTTTGAAAAGGGTTTTTGTTGATGAATTGCGGTTTTACTTTTGCTTGATTTCAGTGTCTGAATGTGTGTAAGATTTCATGTGTTTCCTAATCTCTGATTTGATTCTGCTAGTTAAGGACTTTTTTTTTTTGCCGTTTTAGGTTGCTGATTCGATTGATTTTCTACTTTTCTAATTTGTGTATTTCGAATTTCCATTTTCCCCAGATTCTCTGAGTTAAAAGAAATAGAGATGATCAGTTGTATTTTTGCGTATTTGTTTTTATCAATTAGGAGTATATGGTAATTTTGATAAGTCAAAGTAATCCAACTGAAACTTGCTTTAAAACAGTAAGCTGGTAAGAAGCAGCTGAATGTAGAAATATAAGTTCATATTATAACAAAAGTGGAAAGGAAGTATTTATCTTTGTCAATAGATGTTGATACTATAAATTGTGTTTGGCAAGGGTTTATAGAAATAGAAGTTCATATTATAACAAAAGTGGAAAGGAAGTATTTATCTTTGTCCATAGATGTTGATACTATAAATTATGTTTGGCAAAGGTTTATAGAAATAGAAGTTTATATTATAACAAAAGTGGAAAGGAAGCATCAGCGATTGTGTTTCATAGTGTGAGTGTTTCCCCATTTGAGAGGTTAAAACTTGCAGCATCTGTCTCGTGGTTTAATTAACCTTCGGAAGGGAGGAGTTGATGGAAGATCCGGAAGTGTATGTTTTCCTTGTCGTTTACTTGTTATCTAAGCAGGACATTGACCTTGTCTTTACAGGTACTAGATGGCGACACTTGGAGATATAGGCCTTGCAGCAGCAATAAATATTATATCTGCCTTGATCTTTCTTGTGGCATTTGCAATTTTGCGGCTCCAACCATTCAATGACAGAGTTTATTTCCCCAAATGGTATCTTAAGGGGCTGAGACACAGTCCCACCCACTCTGGGGCATTCGTCGCCAAATTTGTTAATGTTGATTGGAGAGCATATATAAGGTTTCTGAACTGGATACCAGATGCTCTGAAAATGCCTGAACCTGAGCTTATTGACCATGCAGGGTTGGACTCTGCTGTTTATTTGCGCATATACTTGCTAGGGTATGCTTTCTAATTATTGATATCACTTTTGGAGTGATAAGGCATATTTCTGCGATTGTTAATTGTAACCATGTTTTTAATACCATACTATTTTTCTTTGGTAAACCATGTTGATTAACATGTCGAAAATATCGTATAATTACCTTTTTTATTTTGCTTTGTCAAGTTAACTGGATTCATTTCGGATAAGAATGATTACACTGTGCATTCAATATGAAAATATCACAATAGACCCTATAAAATGAGCTGATATTTGAAAGATTCCTCATTATTTATCTTTTTATTTTTAAGTGAATGTGACTGTAAACTCAAAAAAAAACAATGAAGGTAACTGACTATATTTCTATTGGGGATCTTTGAGGTCTCATTTGATTGTATCAATAATAGGGGTTGACTTCAAACAGTGACGATAAAATGGAAAACCAAATATCTGCTGTCATAACCAGACCAGGGGACTGCTTTCAGCATGGAGTGTAGAACTTGAAACATCAATACTTTAGCTTGTTGCATCAATCTCTTGATTCACATGAAAATCCGAAAAAACCAAACATACTGGATTATCTTATCTTCTTTGTTGGCTGTTTGCGTATACTGTAAAATCAAGATAAATAGGTGGTCATGTTTTTCAAATAGTTTCTTTTTCGACTTCTTATAAGAATGGATGAGGATGATCCTTATAATAGGGGATTTAGGTGTCTTAACATTCAATTAGTCATCTATCTAATCGAGGTTCAGAAACAGGAAAAAGAATCAGCACGATAGGAATTTCAATGTTGTATACTTTAAAAGCTCCTTTATTCCTACTAAAGCATATTGCCTTCGTTGCGTTCATTCTATTTAGAGAAACTAGGTGGTCTGTGATGATTACTGCTTCTTGATTTCTGCAGGCTAAAAATCTTTGTTCCCATAACGTTGCTTGCATGGGCTATCCTGGTACCTGTAAATTGGACAAATAGCACTCTGACAAAATCCGACTTTACTTATAGTGACATTGATAAGCTTTCCATTTCAAATGTTCCGCTTGGATCTCTCAGGTTTGGAGATTTATCTTTCAAAATTTTGAAGAATTTGATCCAGTAGATTTGCCATTACGAGATTGTTTTTTCAACATTTAAGTCTTCTTTGATGTAGGTCTTACGCCTTGAAAACTTTTGAGGTCTTCCTCTTGTTTACTTGTTTATTAATTGTTTTTAGTTTTATCATGATGCTATTTGTAGCCTGCTTTGCTTTTGCATGATCTTGACTAGATCTCTTCTTGGGCCATGAATGAAAATTCTGCAGCTAATGCTTCAAATTTTTTCAAATTTCTTGGCGAGACCACCTAGTAACTTGCAAACAAGATTTGTCTTGGACATGTTTTGAGGATCAGTCATTGAGTGGATTTGCAGTCCGTATTTAGAGTCCCAGTTCTGAGATATGTTAACCCATTTTAGATTCCAGCTTGAAAGTCCATATTTAGCATTCAAGTGAAGTTATCTACTAGGAAAATGGCAATACCCCTTTGCTTACCTTAAAACTCCATATTGTAATTCGTATTGACCTGGATTTTTGCAGGTTTTGGACTCATATTGTTATGGCTTATGCCTTCTCATTCTGGACCTGCTATGTCTTAAAAACTGAGTATGCAAAAGTTGCAGCCATGAGGTTGCAGTTTGTCGCCTCTGAAAAACGTCGTCCCGACCAATATACAGTACGTATCAACTTACTTTTTGAAATTGAACATCTAAATTCTTCTGTGTTTTAACAAATTTAGTTTCTGGAAAATGTATTTAATCACTGAAGCATTTGTTCTCTGCAAATGCATTATGTTTTTCCAAAGTTGATAGACAGATATTGAAGCTGACAAGGCATATCTCCTTAACTGTTCAAACTTAAGAGAGTAGTAAAGTTCCTAAGTTTCTGCTTTCTTGTTTGTGTTTGAAATTTGCAATCTTAATTTTCTCATGGTTTGCGTGATTTGGTGGCTAATCTATGGATAAATTATCTGATGAATTTCTGGAAGGCAGTGAACAGATGACAACTTCATCTTTTACCTTGTCTTTCCATAGGTGGACTGAAACATTGGTTCCTCTTGAAATCCTTTGCAATAATTCTTTATGCATTTGATTAGTTTGAAGCAATAAATTAGTCTGTAATTTCTCCAATTAAGTGGTCAATATATTTAGAACTACTTTGCCCATTTTTTATTTTTTTTTTGTGCGTGTGAGAGATTGTGATAGCCATAAACAGAATTAGAACTGAAAATTTTAATTTCTTTTTACCTCTTTCTTCCATTTAACATACCCTCAAGCTGCATGTCTGTGTAAACTTCAATTTATCTAATGTGTGGACAGAGCTTCTGAGCTTTTTGAAAGCAGTTTTCAGAAGACAAAACATTACTTTTACCTCCTTGAATTATGAGGTGGAGTTAAACATGTTGGCGCTTTTTTTACAATTTCATTGATAACAATTACTTTTTTATGTATATTAGCCATTTGATTTAACAGTAGGAAGAAAACTTAATAGCAGAGGGTCATAACTTCCATTGCCCACCTTGATGGTGTTAATTATGGCTCTGTGGTGCATTTTTGTTCATATCTTAGTCAATTCCTTATTTTAGAGAGTAGATGACATCAGGGTAATTTGTTAGGAGGGAGTGTAGAGCAAGTGTATTTTAATGGGGTTTTCACTGAGTCTTAGATTGCATATACAAAATATGTATTTACATTGATTTTACTAGTGTAATTTTGTTTTTCTGGAGAGAGCTAATCATAGTAGCATTCTTAGGTTTTGACACATTAATGCTCCTTCTGAGAACTTAATTTGAGGAACAATATTTACAAGTATCTAGATTTTTGTTTTGAATAAACAATAGACTAGTTTACGTAGAATAAATATACCTCATTTCCTATTGCCATCTGGATTTTTTATGCCTACTATCTTGAACAATGTGACTGCAATTTTTATCTACATTTCTTCTTGTGCTAAAATTTGATTATTACAGGTCCTTGTTAGGAATGTTCCGCCAGATGCTGATGAATCAGTTAGTGAATGTGTGGAGCACTTTTTCCTGGTTAACCATCAAGATCATTATCTCATGCATCAGGTTCGAACTTGCTGGAATACAAGTATCTCATGCTGTTTTACTGATAGAAAAGACAAGTATCTCATATTGTTTTGAGGAAGTAGTGATATATTTTTTGTTTCTGAAATTATGCTCCTTGTTGAAGCCCCCCAAACTTTGGGCTAGTGATAACTGATAAGACGCGGTGCGTGATGAATGGGTTAGGCGCATGTCACAGTTCGAATCCATATTGTATTTTGCAACCATCTCATTTAAATTCTTAAGTGGTTAGACGGTGTCACACTTTTATCTAGCTTCTAATACTCCCTACCATGTAGATGGATGGGGGGTGTAGTTTAGGTTGGTATATCTTCTCATGGACAAGTATCATTTCGCCAGAAGCCCTTGGCTGGGAACAGGACTGGCTACTCTTTTGAGACGAGACTATAAACATGTTTGATATGTCAGTTCCATAGATATGGAGTCTTCATTGCTTGTTATGTTTATTTCTTTATGTGTTCTTCATTTTGAGATATAATAAATAAGAAGTAAGCAGTAGTGTTCATCTTGATATGGAGGACACCAATTTGTGCTTCTTTTTTTCCACTTAGAAACTTTCGGTATAGGCTTTCTTGAACAAATCATTTTAGTTCACCATGGGAAGGGGCACTAGTAAAATTCAATATAGAATATTTTTTTTTGTGAACTTTTTATAAGTTAATCCCACCAAATAGTATTTTTAATATATATGGCATCTGGGCACACCTTGACTAATTCTATGTGGTACCTGCTTCCTACCATAGGTATCTGGTAACTCTATCCACCGAGACTGCAGTAGGAATCACCTAATGTGCGCCTAGGATTCTCAACCCGCTTCATTGGCAATTAGGCCATACCCATGGGTGCAATCGACCAATTAGGTCGACTCTCAATGTAGAATTGTCTTACATTGAGCCCACCCAAATGTCAAAATCTTCATTAGTATTGCTTATTTTATTACTGCAGTAGGAGAAATTAAGGACTCGTGGCTTAGCACAAGGAAAACAACTAGTTCTGCCGGCGAAGAGGTTGGCAAAGACATTAGGAACTAAAGTGGAGTATTAGAAGTAAGTTATGATGCGACAACATAACATGAAAGAGGGCAAAAATCTGAATATAACTTAAAGGTAGGGAATAGAAGTATGAATCTTCCAGTATGGATTTTTTTGTGAGAAACCTTCTGAAAGTTTTGTAAGTCATCTTAAAAGCTATTATCTAATTTAGTAATTGAAATTTCAATGTACAATTTTTTCTGCAAGTTTGTTCTTTTATCATCCCTAATGCTTCTTTTCATGGAAGTTATCAGCATTTATTATCCCTTGTAAGATAATTATTCGTCAGTTTGTGCTCTGATAGGATGGTCTTAGATTTTACTATCCTCTGAGAAAAGTTATCTGCATGTTAAATATTTCAGTATGATGGACTAAAATTTCTTATTATATGCAAATTCTTCATATATGCTTTATTTTTTATGTTGATATGCTATTTCATCTTTATTCACTTAGTTGGATTTTACTATAGGGTGTTTATAATGCCAACAAACTGGCAAAATTGGTGAAGGAGAAGAAGAGTAAGCAAAATTGGCTCGACTATTACCAACTTAAGTACTCTAGGGATCAATCAAAACGGCCTATGATGAAGGTATGGATTTGTCCCTGATCCTACAGATTGTTATTTTTAACTTCTAATATCGCAAAGTATGTTCTGAGGCTCAATTAGTACTTCGTTAACTTAGTTTTGTCTACCTCTAAATAGGTAAGTTGTTTCAGTGCATTCTTTTTCAAAATTTGCAGACTGGTTTCCTTGGATGCTTTGGAGCAAAAGTCGACGCAATTGAGCATCAGATTGCTGAAATTGAAAGATTGACAAAAGAGGTAAATACCAAAACTTTAATCTCCCTAAATAAGTTGAAAAATTTCCAATCGACATATCCTTCTTAGATCAGAGGCTTAGAGTGTGTGATGGAGAATACTGAATGACTTGCTTTCAGCACCACTGAACATTGATTAACCATTTATCTGACATTGCCACATTCACAAATGGGTTTATTCTCTTTTTCTTGTCTTTTCCTGTTGTCCCTTTTTTCTGTTTTTGGTTGATGCTGTTGAATAGGAGGGTGTGGAGGTAGAATATTAGAGTAGAAGATTATAGGAGGGCGGGCATATTTCTATTCCATTCTCAAGAGTATTAATATTCTTCTTCTTCTTTTTTTTCTTATCTAGATTTCTATTACTACTTGTGATTCTTTAGCGTCAATATCCTATTTTCTTACTGTTGTTTCTGCTTGTTATTTCTGCTTCTTTTTCATGTCTATCGGAAACACCTGTTTTTTACCTTCTCAAGGTATAGAGGTAAGGTCTGCGTACGCTCTACCCTCTTCAAACCCCAGCAGTGGAATTACATTGAGTTCGTTCTTGTTGGTTAATGCTGTTGTCTTTCTTTGTTTTGGTTGTATTATTTGCTGTCGTTACTGTTCACTTCTCCTTTTGTTTCTATCTTCACTTCTGTATTTTGTTTCGACACTTGATTTTGATATGCTTTACTTGAGACTAAAGTCTATCGGAAACAACCTCTCTACCTATACAAGGTAGGGGTAAGGCTGCATATACACCACCCTCCCCAGACTCCACTTAGCTGGATATGTTGTTGCTGTTATGCTATAAATCAGCTCTAATTCTATTAATGCCTCGGTCTGACTTTACTTGCAGATAGCTGAAGAGAAACAAAGGGTAGAAAAAGACCCAAAGTCTACCATGCCTGCATCATTTGTCTCCTTCAAATCGCGGTGGGGTGCTGCTGTTTGTGCACAAACACAGCAATCCAGAAATCCAACCTTGTGGTTGACAGAATGGGCTCCAGAGCCACGTGATGTATTTTGGGATAACCTGGCAATCCCCTATGTTTCTTTGACAATTAGGAAGCTCATCATTGCTGTTGCCTTCTTTTTTCTGACATTCTTCTTCATGATCCCGATTGCATTTGTCCAAACCCTTGCCAGCCTTGAGGGGATTAGGAAGAAAGCACCATTTCTGAAAGTTATTATTGACGAGTGAGTACCACATTACACCCTTGTTGTGAATTCAGCCTCATCTCTCATTAGTTTTTTGTCATACTCATGATCCTTGATGGTGATATGACACCTTGGTTCATTCATTTCAAGACTCTAGTGACAGTAATTCAAAAAACAAAATGTATTTATGGTTTTTGGTGCCATCAGGTCTTTGTTTTTTTGGTACAATCAGGTCTACTCAGAAGATACTATATCTATCCTAGACACTTTAGGTTTGCTCACTTGTATATATGGTTTCAGTACAACCCATTACTGATTTGTGCTTACTACATACAACCGTTACCTTCTCAAAAAAAAACAAAAAACAGAATCTAGTGGTTTGTGTTTTTACCTTTGTCCATTTATTTTAAGTCTTTTCGTGAGAACAATTTCAAAAACAAAATTTAGTGGTTTGATATTTGTGTGTACTTGCTGGAACTTGTTTGACATTGAAGCTAGGAGAATTGTGTGAATTTTGCATAGTTAGTTTAGCTTTGTATGATTTGTGTCATCTCATTCCTTGAGATACTTTATCGCTTTTACATTATGTCATCACTCACAAAAGAGATGTTTGACAAAAGTATGCAACCTAGAAATGCTATTTTCTATTTTACATAGTGAGATGATCCATGGATTTCTGATTTCTTTGCGATGCTAAATTGACATCACAAGTAATACACAGCAATGAAACACTATCTATATATGCTGAATTTACTCTGCTAGTGGTTCTTCCAAATTCTTTTCTTGCTTTCTCCTCTCTGTTTTGGTCTTTGTGCTGAGGAATGGGCTGTTATATGAGTTGGTATTTTTGCCAATCATGATCATAGCAGTCATGCACCAGCTTATCTCAAATGTAGGTTTTTTTGGTTACTCTTTTATGCCTAATAATTCTACTGATTTATCATGCAGACCTTTCATCAAGGCGTTCATCCAAGGTTTTCTACCTGGGATTGCTTTGAAGATCTTTCTCATATTTCTGCCAACTATATTGATGATGATGTCCAAATTCGAGGGCTGGCTAAGCATATCAGCTCTAGAGAGGAAATCTGCGTCTAAATACTACATCTTCACTATCGTGAATGTGTTCCTCGGGAACATAATTGCAGGAGCTGCATTTGAACAACTAAGTACCTTTCTCAATCAGTCGGCAAACCAGTACGTTTTTAACGAAAATATATTACTACATTCACCTCAGCCTTTCTTTAACTTGTGAATCAATGGGGAAATTTTGGGAATGCAGTTAGAGTGTGTTTCTTTATGTTGACATTGTCCACATAGATGTACTCTTTCAGTTCTGCTCTAATAAATTATTCAGAATTGTAAAACTGCAACGCCTTTGTACACCCGTATGGAGTTAAACATAACATCACTGAGATATCAGTTTCTGCGAAGCTCAGTCCTCTAGGGACTTGGTGAAATGTTTAATTGAGGGACCAGTTTTCTAGTCCTTGTAAAGTTGGGTGTTACAAGAAAACAGTAGATATGAAATTACAATGTATATATAAAGTAATTTTTTTTTTTATTTTTTAGGTATAGCGATAGATTTGTATTATGAACACAAGACAAGAGGTTGGCTTATTGATTTAGGGGTTCAAAATTTCACCTTGAGGTTCCAAGTTCAAGAGGTTGACAACTAGATTTTTGTTTTTTGAACTCCCCAAGTGAAAATCCTATATCCACCATTGGCTAGGAAACAATTCATATAGGCTAGGCTTCCTTGTTACAGATGGCCTCATCCAGTATGTGAAAATGGTCATGTAGACCATGCATGCTAATCATGTATATATGCTCTTTTACTATCCTAAAACCCATGCTGATTAACGAGATCGTTCCTGTTCACAGTTCCATGCCTGTAATAGTGTTTAAATTTCTAGTTCTAGAAGTATGTTACATGGACTTCTGTATGAATGTTGGATACTGGTATTGTGTTTGGCAAGTTTGTTCAGTTTCTAGAAGGTTTTCTTTGCACTTGAGAGGATTGTTAAGCTGTCCTATATTTGAAAAACTTAATTGTAGTATATTTAATGATGTCTTGTCTTCTTGAATAAGAGGAAATACATCTTTAGTCAATATACTAGTCCCTTTTGGTTCCAGCCAATATATGATTGGTTCTTTATGTGCTGATTCTGCTATTATATTTGTATCGCCAGTGTTATCCTATATTCTTATTAGGTGCATTCTAAGTTTTCCATTCTTTGGCAAGTCTTGCTAGTCCATATCCTTTTACTTGAGGCTCATCTTGCTATAAAACTTCCTATATTTTCTGCAGAATCCCTAAAACGATTGGTGTCGCAGTTCCTATGAAAGCATCCTTCTTCATAACCTACATAATGGTTGACGGCTGGGCTGGTATTGCTGGAGAGATCCTAAGGCTGAAGCCGCTAATATTTTACCACTTGAAGAACTTTTTCTTGGTTAAGACGGAAAAAGATAGAGAAGAGGCAATGGATCCTGGAAGCGTTGGTTTCAACACAGGAGAACCACAGATACAATTATATTTCTTATTGGGGCTTGTCTATGCTGTGGTCACACCATTTCTGCTTCCGTTCATATTGGTCTTCTTTGGCCTTGCATATGTAGTATATCGTCATCAGGTTCGTCTTCTCTCTTCCTTCTTATGCCTATATTTTCTGCAGAATCCCTAAAACGATTGGTGTCGCAGTTCCTATGAAAGCATCCTTCTTCATAACCTACATAATGTGGGGGGAATTGAATGTGGCAAAATAAGGTCATTGAGAATTTAAATACGGGAAATTCTGATAAAAGATGTATAGAAGATTTACTTAAGCCAAGAAAACAAAATAGATTCTTAATTAGTTACACCATTCGCATGAAAGGATAATAAAACATGATACTTATTGAATAAAATATCTATGTGATAAAATAAGCAAAAATTTGATTACTTCCTATGTGTCAATTTGTTTGTCTTACTTTCTCCTTTTAGTTTCTTTTAAAAAGAAGGTGACTTCTCTAGTTTTGACAACACTTTAATTTTAGTATCCCACATGGCATGTTTAAGATCATAAGATTAGAGGGATGATACACATTTTTATGTTTATGACCACAAGATTCAAAGATCTTATTTACTTTCTTAAACTCCGTGACAAGTCAAAATAAGACAAATAAATTGAAACGGATGACACTTCATTGTACTTGTAACGATTATGGTGTCAGTACAAAGTTGATAGCCTTTGAAGTAGTTATGTAGGCCCTACTTCTACTTAGTTGACATGCTAGGGATAACATCAGCTTTGATATTGGATCAGACATGGAATCCCATTGGTTCAAGTGTATGTTATGTTCATAGGAGTGTCGTTTTAATGTTGTTTCTTAGGCCACATGCAACACTTCATTGACTGGGGTATTTGCTAACTGGTAGTATTAATTCTTTCCACATTTAAAAATTAGACAAAGGGAATATGGAGTACTTGTACTGATGGAGATGCACCTATTAATTCCTAGTAAAATTTGTTGTCACCTATTTGCATATGCTAATTCTACTGATTTGAAATTGTTGATGTAGACATGGTTGCATGTTACAATTAGCGTTTTCTGACGCATTCTTTTCCTGAGACAGATTATAAATGTTTACAATCAGGAGTACGAAAGTGCAGCAGCATTCTGGCCAGATGTTCATGGACGTATAATTTTCGCACTGTGCTTTTCTCAGTTATCTTTACTAGGCTTGCTAAGTACAAAACATGCTACTCAGTCAGCACCTTTCCTGATTGCCCTTCCAGTGCTGACCATCTCATTTCACTTGTACTGCAAAGGTCGTTATGAGCCAGCTTTCACCAAATATCCGATACAGGTGTGTGTGGAAGTACATCTTGCAAATAAAAATTTCCACTGTTACAATAGTTTGAGCTCTCTTTTTTTTTTGTGAGGGTCCATTTTTTTTTTCTTCAAATGTCTACAATGCTATCTTCTTCTCTATTTCAGGAAGCAAGGATGAGAGATACTCTGGAACAAGCAAGGGAACCAAATCTTAATCTGAAGGGCTACCTTCAAAATGCTTATGTGCATCCTGTTTTCAAAGACGACGATGAAGATGAGGATGAAGACTTTATGATGAAACTGGAGAACGATAGCGTTCTTGTCCCCACAAAACGCCAGTCAAGAATGAATACACCAGTTCCCAGCAAAGTCAGCGCTGGCTCATCTCCATCACTTCCTGATGCAGTTACTCATGAACATTAAACAGCTTAGAATGATAGGTTGGAATATTTCACCTCCTTTGTGCATGAGAGTTAGATCGCGGAGACTCAACCTTAACTAAGTTGTACAGAGAGCACTTCAACACATCATAGTTGAGCTGGCTGGACCAGTTTACATTGGGACGGTTGGCGTTGAAAGTACAAAAAATTGTAAAGAGCTCCGGTGGTAGCATTAGAAGTTTTGTACACTTAAGGATGTTCATATTTTTAGCATTTGCTGGTTGTTGACACTCAGGATATAATCTTGTACACGAGCTTTCTAAGGGAAT</genome_strand>
        <mrna_strand>GGTGACTTGGTGGGGTTTTGGTTTATTAGGGGTTGGAGTTTAGTTAAAGTAGAAGAAAGGGGAAAAAGTGACAACTGTTGGCTTTTATGGAGCTTTGAAGTTATTGTACTTCTCCGATCGGCTATTGCTACTCTGCTGCTCTGTTATACTCAGCAGCTCTGTAATTGGAAAGAGATTTATAATCACAACTCACAATA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACTAGATGGCGACACTTGGAGATATAGGCCTTGCAGCAGCAATAAATATTATATCTGCCTTGATCTTTCTTGTGGCATTTGCAATTTTGCGGCTCCAACCATTCAATGACAGAGTTTATTTCCCCAAATGGTATCTTAAGGGGCTGAGACACAGTCCCACCCACTCTGGGGCATTCGTCGCCAAATTTGTTAATGTTGATTGGAGAGCATATATAAGGTTTCTGAACTGGATACCAGATGCTCTGAAAATGCCTGAACCTGAGCTTATTGACCATGCAGGGTTGGACTCTGCTGTTTATTTGCGCATATACTTGCTAGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTTGGACTCATATTGTTATGGCTTATGCCTTCTCATTCTGGACCTGCTATGTCTTAAAAACTGAGTATGCAAAAGTTGCAGCCATGAGGTTGCAGTTTGTCGCCTCTGAAAAACGTCGTCCCGACCAATATACA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCTTGTTAGGAATGTTCCGCCAGATGCTGATGAATCAGTTAGTGAATGTGTGGAGCACTTTTTCCTGGTTAACCATCAAGATCATTATCTCATGCATCAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGTTTATAATGCCAACAAACTGGCAAAATTGGTGAAGGAGAAGAAGAGTAAGCAAAATTGGCTCGACTATTACCAACTTAAGTACTCTAGGGATCAATCAAAACGGCCTATGATGAAG........................................................................................................................................................ACTGGTTTCCTTGGATGCTTTGGAGCAAAAGTCGACGCAATTGAGCATCAGATTGCTGAAATTGAAAGATTGACAAAAGAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAGCTGAAGAGAAACAAAGGGTAGAAAAAGACCCAAAGTCTACCATGCCTGCATCATTTGTCTCCTTCAAATCGCGGTGGGGTGCTGCTGTTTGTGCACAAACACAGCAATCCAGAAATCCAACCTTGTGGTTGACAGAATGGGCTCCAGAGCCACGTGATGTATTTTGGGATAACCTGGCAATCCCCTATGTTTCTTTGACAATTAGGAAGCTCATCATTGCTGTTGCCTTCTTTTTTCTGACATTCTTCTTCATGATCCCGATTGCATTTGTCCAAACCCTTGCCAGCCTTGAGGGGATTAGGAAGAAAGCACCATTTCTGAAAGTTATTATTGACGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCTTTCATCAAGGCGTTCATCCAAGGTTTTCTACCTGGGATTGCTTTGAAGATCTTTCTCATATTTCTGCCAACTATATTGATGATGATGTCCAAATTCGAGGGCTGGCTAAGCATATCAGCTCTAGAGAGGAAATCTGCGTCTAAATACTACATCTTCACTATCGTGAATGTGTTCCTCGGGAACATAATTGCAGGAGCTGCATTTGAACAACTAAGTACCTTTCTCAATCAGTCGGCAAACCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCCCTAAAACGATTGGTGTCGCAGTTCCTATGAAAGCATCCTTCTTCATAACCTACATAATGGTTGACGGCTGGGCTGGTATTGCTGGAGAGATCCTAAGGCTGAAGCCGCTAATATTTTACCACTTGAAGAACTTTTTCTTGGTTAAGACGGAAAAAGATAGAGAAGAGGCAATGGATCCTGGAAGCGTTGGTTTCAACACAGGAGAACCACAGATACAATTATATTTCTTATTGGGGCTTGTCTATGCTGTGGTCACACCATTTCTGCTTCCGTTCATATTGGTCTTCTTTGGCCTTGCATATGTAGTATATCGTCATCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTATAAATGTTTACAATCAGGAGTACGAAAGTGCAGCAGCATTCTGGCCAGATGTTCATGGACGTATAATTTTCGCACTGTGCTTTTCTCAGTTATCTTTACTAGGCTTGCTAAGTACAAAACATGCTACTCAGTCAGCACCTTTCCTGATTGCCCTTCCAGTGCTGACCATCTCATTTCACTTGTACTGCAAAGGTCGTTATGAGCCAGCTTTCACCAAATATCCGATACAG...................................................................................................................................GAAGCAAGGATGAGAGATACTCTGGAACAAGCAAGGGAACCAAATCTTAATCTGAAGGGCTACCTTCAAAATGCTTATGTGCATCCTGTTTTCAAAGACGACGATGAAGATGAGGATGAAGACTTTATGATGAAACTGGAGAACGATAGCGTTCTTGTCCCCACAAAACGCCAGTCAAGAATGAATACACCAGTTCCCAGCAAAGTCAGCGCTGGCTCATCTCCATCACTTCCTGATGCAGTTACTCATGAACATTAAACAGCTTAGAATGATAGGTTGGAATATTTCACCTCCTTTGTGCATGAGAGTTAGATCGCGGAGACTCAACCTTAACTAAGTTGTACAGAGAGCACTTCAACACATCATAGTTGAGCTGGCTGGACCAGTTTACATTGGGACGGTTGGCGTTGAAAGTACAAAAAATTGTAAAGAGCTCCGGTGGTAGCATTAGAAGTTTTGTACACTTAAGGATGTTCATATTTTTAGCATTTGCTGGTTGTTGACACTCAGGATATAATCTTGTACACGAGCTTTCTAAGGGAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E706435" ref_strand="+" ref_description="SGN-E706435 [FA29DG11]">
      <seq>tttttcttggttaagacggaaaaagatagagaagaggcaatggatcctggaagcgttggtttcaacacaggagaaccacagatacaattatatttcttattggggcttgtctatgctgtggtcacaccatttctgcttccgttcatattggtcttctttggccttgcatatgtagtatatcgtcatcagattataaatgtttacaatcaggagtacgaaagtgcagcagcattctggccagatgttcatggacgtataattttcgcactgtgcttttctcagttatctttactaggcttgctaagtacaaaacatgctactcagtcagcacctttcctgattgcccttccagtgctgaccatctcatttcacttgtactgcaaaggtcgttatgagccagctttcaccaaatatccgatacaggaagcaaggatgagagatactctggaacaagcaagggaaccaaatcttaatctgaagggctaccttcaaaatgcttatgtgcatcctgttttcaaagacgacgatgaagatgaggatgaagactttatgatgaaactggagaacgatagcgttcttgtccccacaaaacgccagtcaagaatgaatacaccagttcccagcanagtcagcgctggctcatctccatcacttcctgatgcagttactcatgaacattaaacagcttagaatgataggttggaatatttcacctcctttgtgcatgagagttagatcgcggagactcaaccttaactaagttgtacagagagcacttcaacacatcatagttgagctggctggac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="-" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="84118" stop="81599"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="83818" g_stop="83630" g_length="189"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="189" r_length="189" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="83629" i_stop="82647" i_length="983">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.720" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82646" g_stop="82413" g_length="234"/>
          <reference_exon_boundary r_type="cDNA" r_start="190" r_stop="423" r_length="234" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="82412" i_stop="82282" i_length="131">
            <donor d_prob="0.915" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="82281" g_stop="81899" g_length="383"/>
          <reference_exon_boundary r_type="cDNA" r_start="424" r_stop="806" r_length="383" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="-" ref_id="SGN-E706435" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>806</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E706435" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="83818" e_stop="83630"/>
          <exon e_start="82646" e_stop="82413"/>
          <exon e_start="82281" e_stop="81899"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTTCTTGGTTAAGACGGAAAAAGATAGAGAAGAGGCAATGGATCCTGGAAGCGTTGGTTTCAACACAGGAGAACCACAGATACAATTATATTTCTTATTGGGGCTTGTCTATGCTGTGGTCACACCATTTCTGCTTCCGTTCATATTGGTCTTCTTTGGCCTTGCATATGTAGTATATCGTCATCAGGTTCGTCTTCTCTCTTCCTTCTTATGCCTATATTTTCTGCAGAATCCCTAAAACGATTGGTGTCGCAGTTCCTATGAAAGCATCCTTCTTCATAACCTACATAATGTGGGGGGAATTGAATGTGGCAAAATAAGGTCATTGAGAATTTAAATACGGGAAATTCTGATAAAAGATGTATAGAAGATTTACTTAAGCCAAGAAAACAAAATAGATTCTTAATTAGTTACACCATTCGCATGAAAGGATAATAAAACATGATACTTATTGAATAAAATATCTATGTGATAAAATAAGCAAAAATTTGATTACTTCCTATGTGTCAATTTGTTTGTCTTACTTTCTCCTTTTAGTTTCTTTTAAAAAGAAGGTGACTTCTCTAGTTTTGACAACACTTTAATTTTAGTATCCCACATGGCATGTTTAAGATCATAAGATTAGAGGGATGATACACATTTTTATGTTTATGACCACAAGATTCAAAGATCTTATTTACTTTCTTAAACTCCGTGACAAGTCAAAATAAGACAAATAAATTGAAACGGATGACACTTCATTGTACTTGTAACGATTATGGTGTCAGTACAAAGTTGATAGCCTTTGAAGTAGTTATGTAGGCCCTACTTCTACTTAGTTGACATGCTAGGGATAACATCAGCTTTGATATTGGATCAGACATGGAATCCCATTGGTTCAAGTGTATGTTATGTTCATAGGAGTGTCGTTTTAATGTTGTTTCTTAGGCCACATGCAACACTTCATTGACTGGGGTATTTGCTAACTGGTAGTATTAATTCTTTCCACATTTAAAAATTAGACAAAGGGAATATGGAGTACTTGTACTGATGGAGATGCACCTATTAATTCCTAGTAAAATTTGTTGTCACCTATTTGCATATGCTAATTCTACTGATTTGAAATTGTTGATGTAGACATGGTTGCATGTTACAATTAGCGTTTTCTGACGCATTCTTTTCCTGAGACAGATTATAAATGTTTACAATCAGGAGTACGAAAGTGCAGCAGCATTCTGGCCAGATGTTCATGGACGTATAATTTTCGCACTGTGCTTTTCTCAGTTATCTTTACTAGGCTTGCTAAGTACAAAACATGCTACTCAGTCAGCACCTTTCCTGATTGCCCTTCCAGTGCTGACCATCTCATTTCACTTGTACTGCAAAGGTCGTTATGAGCCAGCTTTCACCAAATATCCGATACAGGTGTGTGTGGAAGTACATCTTGCAAATAAAAATTTCCACTGTTACAATAGTTTGAGCTCTCTTTTTTTTTTGTGAGGGTCCATTTTTTTTTTCTTCAAATGTCTACAATGCTATCTTCTTCTCTATTTCAGGAAGCAAGGATGAGAGATACTCTGGAACAAGCAAGGGAACCAAATCTTAATCTGAAGGGCTACCTTCAAAATGCTTATGTGCATCCTGTTTTCAAAGACGACGATGAAGATGAGGATGAAGACTTTATGATGAAACTGGAGAACGATAGCGTTCTTGTCCCCACAAAACGCCAGTCAAGAATGAATACACCAGTTCCCAGCAAAGTCAGCGCTGGCTCATCTCCATCACTTCCTGATGCAGTTACTCATGAACATTAAACAGCTTAGAATGATAGGTTGGAATATTTCACCTCCTTTGTGCATGAGAGTTAGATCGCGGAGACTCAACCTTAACTAAGTTGTACAGAGAGCACTTCAACACATCATAGTTGAGCTGGCTGGAC</genome_strand>
        <mrna_strand>TTTTTCTTGGTTAAGACGGAAAAAGATAGAGAAGAGGCAATGGATCCTGGAAGCGTTGGTTTCAACACAGGAGAACCACAGATACAATTATATTTCTTATTGGGGCTTGTCTATGCTGTGGTCACACCATTTCTGCTTCCGTTCATATTGGTCTTCTTTGGCCTTGCATATGTAGTATATCGTCATCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTATAAATGTTTACAATCAGGAGTACGAAAGTGCAGCAGCATTCTGGCCAGATGTTCATGGACGTATAATTTTCGCACTGTGCTTTTCTCAGTTATCTTTACTAGGCTTGCTAAGTACAAAACATGCTACTCAGTCAGCACCTTTCCTGATTGCCCTTCCAGTGCTGACCATCTCATTTCACTTGTACTGCAAAGGTCGTTATGAGCCAGCTTTCACCAAATATCCGATACAG...................................................................................................................................GAAGCAAGGATGAGAGATACTCTGGAACAAGCAAGGGAACCAAATCTTAATCTGAAGGGCTACCTTCAAAATGCTTATGTGCATCCTGTTTTCAAAGACGACGATGAAGATGAGGATGAAGACTTTATGATGAAACTGGAGAACGATAGCGTTCTTGTCCCCACAAAACGCCAGTCAAGAATGAATACACCAGTTCCCAGCANAGTCAGCGCTGGCTCATCTCCATCACTTCCTGATGCAGTTACTCATGAACATTAAACAGCTTAGAATGATAGGTTGGAATATTTCACCTCCTTTGTGCATGAGAGTTAGATCGCGGAGACTCAACCTTAACTAAGTTGTACAGAGAGCACTTCAACACATCATAGTTGAGCTGGCTGGAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E705440" ref_strand="+" ref_description="SGN-E705440 [FA27AF07]">
      <seq>aatggttgacggctgggctggtattgctggagagatcctaaggctgaagccgctaatattttaccacttgaagaactttttcttggttaagacggaaaaagatagagaagaggcaatggatcctggaagcgttggtttcaacacaggagaaccacagatacaattatatttcttattggggcttgtctatgctgtggtcacaccatttctgcttccgttcatattggtcttctttggccttgcatatgtagtatatcgtcatcagattataaatgtttacaatcaggagtacgaaagtgcagcagcattctggccagatgttcatggacgtataattttcgcactgtgcttttctcagttatctttactaggcttgctaagtacaaaacatgctactcagtcagcacctttcctgattgcccttccagtgctgaccatctcatttcacttgtactgcaaaggtcgttatgagccagctttcaccaaatatccgatacaggaagcaaggatgagagatactctggaacaagcaagggaaccaaatcttaatctgaagggctaccttcaaaatgcttatgtgcatcctgttttcaaagacgacgatgaagatgaggatgaagactttatgatgaaactggagaacgatagcgttcttgtccccacaaaacgccagtcaagaatgaatacaccagttcccagcaaagtcagcgctggctcatctccatcacttcctgatgcagttactcatgaacattaaacagcttagaatgataggttggaatatttcacctcctttgtgcatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="-" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="84194" stop="81678"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="83894" g_stop="83630" g_length="265"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="265" r_length="265" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="83629" i_stop="82647" i_length="983">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.720" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82646" g_stop="82413" g_length="234"/>
          <reference_exon_boundary r_type="cDNA" r_start="266" r_stop="499" r_length="234" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="82412" i_stop="82282" i_length="131">
            <donor d_prob="0.915" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="82281" g_stop="81978" g_length="304"/>
          <reference_exon_boundary r_type="cDNA" r_start="500" r_stop="803" r_length="304" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="-" ref_id="SGN-E705440" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>803</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E705440" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="83894" e_stop="83630"/>
          <exon e_start="82646" e_stop="82413"/>
          <exon e_start="82281" e_stop="81978"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATGGTTGACGGCTGGGCTGGTATTGCTGGAGAGATCCTAAGGCTGAAGCCGCTAATATTTTACCACTTGAAGAACTTTTTCTTGGTTAAGACGGAAAAAGATAGAGAAGAGGCAATGGATCCTGGAAGCGTTGGTTTCAACACAGGAGAACCACAGATACAATTATATTTCTTATTGGGGCTTGTCTATGCTGTGGTCACACCATTTCTGCTTCCGTTCATATTGGTCTTCTTTGGCCTTGCATATGTAGTATATCGTCATCAGGTTCGTCTTCTCTCTTCCTTCTTATGCCTATATTTTCTGCAGAATCCCTAAAACGATTGGTGTCGCAGTTCCTATGAAAGCATCCTTCTTCATAACCTACATAATGTGGGGGGAATTGAATGTGGCAAAATAAGGTCATTGAGAATTTAAATACGGGAAATTCTGATAAAAGATGTATAGAAGATTTACTTAAGCCAAGAAAACAAAATAGATTCTTAATTAGTTACACCATTCGCATGAAAGGATAATAAAACATGATACTTATTGAATAAAATATCTATGTGATAAAATAAGCAAAAATTTGATTACTTCCTATGTGTCAATTTGTTTGTCTTACTTTCTCCTTTTAGTTTCTTTTAAAAAGAAGGTGACTTCTCTAGTTTTGACAACACTTTAATTTTAGTATCCCACATGGCATGTTTAAGATCATAAGATTAGAGGGATGATACACATTTTTATGTTTATGACCACAAGATTCAAAGATCTTATTTACTTTCTTAAACTCCGTGACAAGTCAAAATAAGACAAATAAATTGAAACGGATGACACTTCATTGTACTTGTAACGATTATGGTGTCAGTACAAAGTTGATAGCCTTTGAAGTAGTTATGTAGGCCCTACTTCTACTTAGTTGACATGCTAGGGATAACATCAGCTTTGATATTGGATCAGACATGGAATCCCATTGGTTCAAGTGTATGTTATGTTCATAGGAGTGTCGTTTTAATGTTGTTTCTTAGGCCACATGCAACACTTCATTGACTGGGGTATTTGCTAACTGGTAGTATTAATTCTTTCCACATTTAAAAATTAGACAAAGGGAATATGGAGTACTTGTACTGATGGAGATGCACCTATTAATTCCTAGTAAAATTTGTTGTCACCTATTTGCATATGCTAATTCTACTGATTTGAAATTGTTGATGTAGACATGGTTGCATGTTACAATTAGCGTTTTCTGACGCATTCTTTTCCTGAGACAGATTATAAATGTTTACAATCAGGAGTACGAAAGTGCAGCAGCATTCTGGCCAGATGTTCATGGACGTATAATTTTCGCACTGTGCTTTTCTCAGTTATCTTTACTAGGCTTGCTAAGTACAAAACATGCTACTCAGTCAGCACCTTTCCTGATTGCCCTTCCAGTGCTGACCATCTCATTTCACTTGTACTGCAAAGGTCGTTATGAGCCAGCTTTCACCAAATATCCGATACAGGTGTGTGTGGAAGTACATCTTGCAAATAAAAATTTCCACTGTTACAATAGTTTGAGCTCTCTTTTTTTTTTGTGAGGGTCCATTTTTTTTTTCTTCAAATGTCTACAATGCTATCTTCTTCTCTATTTCAGGAAGCAAGGATGAGAGATACTCTGGAACAAGCAAGGGAACCAAATCTTAATCTGAAGGGCTACCTTCAAAATGCTTATGTGCATCCTGTTTTCAAAGACGACGATGAAGATGAGGATGAAGACTTTATGATGAAACTGGAGAACGATAGCGTTCTTGTCCCCACAAAACGCCAGTCAAGAATGAATACACCAGTTCCCAGCAAAGTCAGCGCTGGCTCATCTCCATCACTTCCTGATGCAGTTACTCATGAACATTAAACAGCTTAGAATGATAGGTTGGAATATTTCACCTCCTTTGTGCATG</genome_strand>
        <mrna_strand>AATGGTTGACGGCTGGGCTGGTATTGCTGGAGAGATCCTAAGGCTGAAGCCGCTAATATTTTACCACTTGAAGAACTTTTTCTTGGTTAAGACGGAAAAAGATAGAGAAGAGGCAATGGATCCTGGAAGCGTTGGTTTCAACACAGGAGAACCACAGATACAATTATATTTCTTATTGGGGCTTGTCTATGCTGTGGTCACACCATTTCTGCTTCCGTTCATATTGGTCTTCTTTGGCCTTGCATATGTAGTATATCGTCATCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTATAAATGTTTACAATCAGGAGTACGAAAGTGCAGCAGCATTCTGGCCAGATGTTCATGGACGTATAATTTTCGCACTGTGCTTTTCTCAGTTATCTTTACTAGGCTTGCTAAGTACAAAACATGCTACTCAGTCAGCACCTTTCCTGATTGCCCTTCCAGTGCTGACCATCTCATTTCACTTGTACTGCAAAGGTCGTTATGAGCCAGCTTTCACCAAATATCCGATACAG...................................................................................................................................GAAGCAAGGATGAGAGATACTCTGGAACAAGCAAGGGAACCAAATCTTAATCTGAAGGGCTACCTTCAAAATGCTTATGTGCATCCTGTTTTCAAAGACGACGATGAAGATGAGGATGAAGACTTTATGATGAAACTGGAGAACGATAGCGTTCTTGTCCCCACAAAACGCCAGTCAAGAATGAATACACCAGTTCCCAGCAAAGTCAGCGCTGGCTCATCTCCATCACTTCCTGATGCAGTTACTCATGAACATTAAACAGCTTAGAATGATAGGTTGGAATATTTCACCTCCTTTGTGCATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E283953" ref_strand="+" ref_description="SGN-E283953 [cLER-13-J21]">
      <seq>gaaagtgcagcagcattctggccagatgttcatggacgtataattttcgcactgtgcttttctcagttatctttactaggcttgctaagtacaaaacatgctactcagtcagcacctttcctgattgcccttccagtgctgaccatctcatttcacttgtactgcaaaggtcgttatgagccagctttcaccaaatatccgatacaggaagcaaggatgagagatactctggaacaagcaagggaaccaaatcttaatctgaagggctaccttcaaaatgcttatgtgcatcctgttttcaaagacgacgatgaagatgaggatgaagactttatgatgaaactggagaacgatagcgttcttgtccccacaaaacgccagtcaagaatgaatacaccagttcccagcaaagtcagcgctggctcatctccatcacttcctgatgcagttactcatgaacattaaacagcttagaatgataggttggaatatttcac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="-" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="82919" stop="81692"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82619" g_stop="82413" g_length="207"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="207" r_length="207" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82412" i_stop="82282" i_length="131">
            <donor d_prob="0.915" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82281" g_stop="81992" g_length="290"/>
          <reference_exon_boundary r_type="cDNA" r_start="208" r_stop="497" r_length="290" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="-" ref_id="SGN-E283953" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>497</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E283953" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82619" e_stop="82413"/>
          <exon e_start="82281" e_stop="81992"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAAGTGCAGCAGCATTCTGGCCAGATGTTCATGGACGTATAATTTTCGCACTGTGCTTTTCTCAGTTATCTTTACTAGGCTTGCTAAGTACAAAACATGCTACTCAGTCAGCACCTTTCCTGATTGCCCTTCCAGTGCTGACCATCTCATTTCACTTGTACTGCAAAGGTCGTTATGAGCCAGCTTTCACCAAATATCCGATACAGGTGTGTGTGGAAGTACATCTTGCAAATAAAAATTTCCACTGTTACAATAGTTTGAGCTCTCTTTTTTTTTTGTGAGGGTCCATTTTTTTTTTCTTCAAATGTCTACAATGCTATCTTCTTCTCTATTTCAGGAAGCAAGGATGAGAGATACTCTGGAACAAGCAAGGGAACCAAATCTTAATCTGAAGGGCTACCTTCAAAATGCTTATGTGCATCCTGTTTTCAAAGACGACGATGAAGATGAGGATGAAGACTTTATGATGAAACTGGAGAACGATAGCGTTCTTGTCCCCACAAAACGCCAGTCAAGAATGAATACACCAGTTCCCAGCAAAGTCAGCGCTGGCTCATCTCCATCACTTCCTGATGCAGTTACTCATGAACATTAAACAGCTTAGAATGATAGGTTGGAATATTTCAC</genome_strand>
        <mrna_strand>GAAAGTGCAGCAGCATTCTGGCCAGATGTTCATGGACGTATAATTTTCGCACTGTGCTTTTCTCAGTTATCTTTACTAGGCTTGCTAAGTACAAAACATGCTACTCAGTCAGCACCTTTCCTGATTGCCCTTCCAGTGCTGACCATCTCATTTCACTTGTACTGCAAAGGTCGTTATGAGCCAGCTTTCACCAAATATCCGATACAG...................................................................................................................................GAAGCAAGGATGAGAGATACTCTGGAACAAGCAAGGGAACCAAATCTTAATCTGAAGGGCTACCTTCAAAATGCTTATGTGCATCCTGTTTTCAAAGACGACGATGAAGATGAGGATGAAGACTTTATGATGAAACTGGAGAACGATAGCGTTCTTGTCCCCACAAAACGCCAGTCAAGAATGAATACACCAGTTCCCAGCAAAGTCAGCGCTGGCTCATCTCCATCACTTCCTGATGCAGTTACTCATGAACATTAAACAGCTTAGAATGATAGGTTGGAATATTTCAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E235633" ref_strand="+" ref_description="SGN-E235633 [cLED-15-K21]">
      <seq>ggccttgcatatgtagtatatcgtcatcagattataaatgtttacaatcaggagtacgaaagtgcagcagcattctggccagatgttcatggacgtataattttcgcactgtgcttttctcagttatctttactaggcttgctaagtacaaaacatgctactcagtcagcacctttcctgattgcccttccagtgctgaccatctcatttcacttgtactgcaaaggtcgttatgagccagctttcaccaaatatccgatacaggaagcaaggatgagagatactctggaacaagcaagggaaccaaatcttaatctgaagggctaccttcaaaatgcttatgtgcatcctgttttcaaagacgacgatgaagatgaggatgaagactttatgatgaaactggagaacgatagcgttcttgtccccacaaaacgccagtcaagaatgaatacaccagttcccagcaaagtcagcgctggctcatctccatcacttcctgatgcagttactcatgaacattaaacagcttaaaatga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="-" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="83959" stop="81710"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="83659" g_stop="83630" g_length="30"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="30" r_length="30" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="83629" i_stop="82647" i_length="983">
            <donor d_prob="0.998" d_score="0.00"/>
            <acceptor a_prob="0.720" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82646" g_stop="82413" g_length="234"/>
          <reference_exon_boundary r_type="cDNA" r_start="31" r_stop="264" r_length="234" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="82412" i_stop="82282" i_length="131">
            <donor d_prob="0.915" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="82281" g_stop="82010" g_length="272"/>
          <reference_exon_boundary r_type="cDNA" r_start="265" r_stop="536" r_length="272" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="-" ref_id="SGN-E235633" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>536</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E235633" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="83659" e_stop="83630"/>
          <exon e_start="82646" e_stop="82413"/>
          <exon e_start="82281" e_stop="82010"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGCCTTGCATATGTAGTATATCGTCATCAGGTTCGTCTTCTCTCTTCCTTCTTATGCCTATATTTTCTGCAGAATCCCTAAAACGATTGGTGTCGCAGTTCCTATGAAAGCATCCTTCTTCATAACCTACATAATGTGGGGGGAATTGAATGTGGCAAAATAAGGTCATTGAGAATTTAAATACGGGAAATTCTGATAAAAGATGTATAGAAGATTTACTTAAGCCAAGAAAACAAAATAGATTCTTAATTAGTTACACCATTCGCATGAAAGGATAATAAAACATGATACTTATTGAATAAAATATCTATGTGATAAAATAAGCAAAAATTTGATTACTTCCTATGTGTCAATTTGTTTGTCTTACTTTCTCCTTTTAGTTTCTTTTAAAAAGAAGGTGACTTCTCTAGTTTTGACAACACTTTAATTTTAGTATCCCACATGGCATGTTTAAGATCATAAGATTAGAGGGATGATACACATTTTTATGTTTATGACCACAAGATTCAAAGATCTTATTTACTTTCTTAAACTCCGTGACAAGTCAAAATAAGACAAATAAATTGAAACGGATGACACTTCATTGTACTTGTAACGATTATGGTGTCAGTACAAAGTTGATAGCCTTTGAAGTAGTTATGTAGGCCCTACTTCTACTTAGTTGACATGCTAGGGATAACATCAGCTTTGATATTGGATCAGACATGGAATCCCATTGGTTCAAGTGTATGTTATGTTCATAGGAGTGTCGTTTTAATGTTGTTTCTTAGGCCACATGCAACACTTCATTGACTGGGGTATTTGCTAACTGGTAGTATTAATTCTTTCCACATTTAAAAATTAGACAAAGGGAATATGGAGTACTTGTACTGATGGAGATGCACCTATTAATTCCTAGTAAAATTTGTTGTCACCTATTTGCATATGCTAATTCTACTGATTTGAAATTGTTGATGTAGACATGGTTGCATGTTACAATTAGCGTTTTCTGACGCATTCTTTTCCTGAGACAGATTATAAATGTTTACAATCAGGAGTACGAAAGTGCAGCAGCATTCTGGCCAGATGTTCATGGACGTATAATTTTCGCACTGTGCTTTTCTCAGTTATCTTTACTAGGCTTGCTAAGTACAAAACATGCTACTCAGTCAGCACCTTTCCTGATTGCCCTTCCAGTGCTGACCATCTCATTTCACTTGTACTGCAAAGGTCGTTATGAGCCAGCTTTCACCAAATATCCGATACAGGTGTGTGTGGAAGTACATCTTGCAAATAAAAATTTCCACTGTTACAATAGTTTGAGCTCTCTTTTTTTTTTGTGAGGGTCCATTTTTTTTTTCTTCAAATGTCTACAATGCTATCTTCTTCTCTATTTCAGGAAGCAAGGATGAGAGATACTCTGGAACAAGCAAGGGAACCAAATCTTAATCTGAAGGGCTACCTTCAAAATGCTTATGTGCATCCTGTTTTCAAAGACGACGATGAAGATGAGGATGAAGACTTTATGATGAAACTGGAGAACGATAGCGTTCTTGTCCCCACAAAACGCCAGTCAAGAATGAATACACCAGTTCCCAGCAAAGTCAGCGCTGGCTCATCTCCATCACTTCCTGATGCAGTTACTCATGAACATTAAACAGCTTAGAATGA</genome_strand>
        <mrna_strand>GGCCTTGCATATGTAGTATATCGTCATCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTATAAATGTTTACAATCAGGAGTACGAAAGTGCAGCAGCATTCTGGCCAGATGTTCATGGACGTATAATTTTCGCACTGTGCTTTTCTCAGTTATCTTTACTAGGCTTGCTAAGTACAAAACATGCTACTCAGTCAGCACCTTTCCTGATTGCCCTTCCAGTGCTGACCATCTCATTTCACTTGTACTGCAAAGGTCGTTATGAGCCAGCTTTCACCAAATATCCGATACAG...................................................................................................................................GAAGCAAGGATGAGAGATACTCTGGAACAAGCAAGGGAACCAAATCTTAATCTGAAGGGCTACCTTCAAAATGCTTATGTGCATCCTGTTTTCAAAGACGACGATGAAGATGAGGATGAAGACTTTATGATGAAACTGGAGAACGATAGCGTTCTTGTCCCCACAAAACGCCAGTCAAGAATGAATACACCAGTTCCCAGCAAAGTCAGCGCTGGCTCATCTCCATCACTTCCTGATGCAGTTACTCATGAACATTAAACAGCTTAAAATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E371142" ref_strand="+" ref_description="SGN-E371142 [TUS-28-J15]">
      <seq>aggcaatggatcctggaagcgttggtttcaacacaggagaaccacagatacaattatatttcttattggggcttgtctatgctgtggtcacaccatttctgcttccgttcatattggtcttctttggccttgcatatgtagtatatcgtcatcagattataaatgtttacaatcaggagtacgaaagtgcagcagcattctggccagatgttcatggacgtataattttcgcactgtgcttttctcagttatctttactaggcttgctaagtacaaaacatgctactcagtcagcacctttcctgattgcccttccagtgctgaccatctcatttcacttgtactgcaaaggtcgttatgagccagctttcaccaaatatccgatacaggaagcaaggatgagagatactctggaacaagcaagggaaccaaatcttaatctgaagggctaccttcaaaatgcttatgtgcatcctgttttcaaagacgacgatgaagatgaggatgaagactttatgatgaaactggagaacgatagcgttcttgtccccacaaaacgccagtcaagaatgaatacaccagttcccagcaaagtcagcgctggctcatctccatcactttctgatgcagttactcatgaacattaaacagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="-" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="84084" stop="81719"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="83784" g_stop="83630" g_length="155"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="155" r_length="155" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="83629" i_stop="82647" i_length="983">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.720" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82646" g_stop="82413" g_length="234"/>
          <reference_exon_boundary r_type="cDNA" r_start="156" r_stop="389" r_length="234" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="82412" i_stop="82282" i_length="131">
            <donor d_prob="0.915" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="82281" g_stop="82019" g_length="263"/>
          <reference_exon_boundary r_type="cDNA" r_start="390" r_stop="652" r_length="263" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="-" ref_id="SGN-E371142" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>652</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E371142" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="83784" e_stop="83630"/>
          <exon e_start="82646" e_stop="82413"/>
          <exon e_start="82281" e_stop="82019"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGCAATGGATCCTGGAAGCGTTGGTTTCAACACAGGAGAACCACAGATACAATTATATTTCTTATTGGGGCTTGTCTATGCTGTGGTCACACCATTTCTGCTTCCGTTCATATTGGTCTTCTTTGGCCTTGCATATGTAGTATATCGTCATCAGGTTCGTCTTCTCTCTTCCTTCTTATGCCTATATTTTCTGCAGAATCCCTAAAACGATTGGTGTCGCAGTTCCTATGAAAGCATCCTTCTTCATAACCTACATAATGTGGGGGGAATTGAATGTGGCAAAATAAGGTCATTGAGAATTTAAATACGGGAAATTCTGATAAAAGATGTATAGAAGATTTACTTAAGCCAAGAAAACAAAATAGATTCTTAATTAGTTACACCATTCGCATGAAAGGATAATAAAACATGATACTTATTGAATAAAATATCTATGTGATAAAATAAGCAAAAATTTGATTACTTCCTATGTGTCAATTTGTTTGTCTTACTTTCTCCTTTTAGTTTCTTTTAAAAAGAAGGTGACTTCTCTAGTTTTGACAACACTTTAATTTTAGTATCCCACATGGCATGTTTAAGATCATAAGATTAGAGGGATGATACACATTTTTATGTTTATGACCACAAGATTCAAAGATCTTATTTACTTTCTTAAACTCCGTGACAAGTCAAAATAAGACAAATAAATTGAAACGGATGACACTTCATTGTACTTGTAACGATTATGGTGTCAGTACAAAGTTGATAGCCTTTGAAGTAGTTATGTAGGCCCTACTTCTACTTAGTTGACATGCTAGGGATAACATCAGCTTTGATATTGGATCAGACATGGAATCCCATTGGTTCAAGTGTATGTTATGTTCATAGGAGTGTCGTTTTAATGTTGTTTCTTAGGCCACATGCAACACTTCATTGACTGGGGTATTTGCTAACTGGTAGTATTAATTCTTTCCACATTTAAAAATTAGACAAAGGGAATATGGAGTACTTGTACTGATGGAGATGCACCTATTAATTCCTAGTAAAATTTGTTGTCACCTATTTGCATATGCTAATTCTACTGATTTGAAATTGTTGATGTAGACATGGTTGCATGTTACAATTAGCGTTTTCTGACGCATTCTTTTCCTGAGACAGATTATAAATGTTTACAATCAGGAGTACGAAAGTGCAGCAGCATTCTGGCCAGATGTTCATGGACGTATAATTTTCGCACTGTGCTTTTCTCAGTTATCTTTACTAGGCTTGCTAAGTACAAAACATGCTACTCAGTCAGCACCTTTCCTGATTGCCCTTCCAGTGCTGACCATCTCATTTCACTTGTACTGCAAAGGTCGTTATGAGCCAGCTTTCACCAAATATCCGATACAGGTGTGTGTGGAAGTACATCTTGCAAATAAAAATTTCCACTGTTACAATAGTTTGAGCTCTCTTTTTTTTTTGTGAGGGTCCATTTTTTTTTTCTTCAAATGTCTACAATGCTATCTTCTTCTCTATTTCAGGAAGCAAGGATGAGAGATACTCTGGAACAAGCAAGGGAACCAAATCTTAATCTGAAGGGCTACCTTCAAAATGCTTATGTGCATCCTGTTTTCAAAGACGACGATGAAGATGAGGATGAAGACTTTATGATGAAACTGGAGAACGATAGCGTTCTTGTCCCCACAAAACGCCAGTCAAGAATGAATACACCAGTTCCCAGCAAAGTCAGCGCTGGCTCATCTCCATCACTTCCTGATGCAGTTACTCATGAACATTAAACAGC</genome_strand>
        <mrna_strand>AGGCAATGGATCCTGGAAGCGTTGGTTTCAACACAGGAGAACCACAGATACAATTATATTTCTTATTGGGGCTTGTCTATGCTGTGGTCACACCATTTCTGCTTCCGTTCATATTGGTCTTCTTTGGCCTTGCATATGTAGTATATCGTCATCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTATAAATGTTTACAATCAGGAGTACGAAAGTGCAGCAGCATTCTGGCCAGATGTTCATGGACGTATAATTTTCGCACTGTGCTTTTCTCAGTTATCTTTACTAGGCTTGCTAAGTACAAAACATGCTACTCAGTCAGCACCTTTCCTGATTGCCCTTCCAGTGCTGACCATCTCATTTCACTTGTACTGCAAAGGTCGTTATGAGCCAGCTTTCACCAAATATCCGATACAG...................................................................................................................................GAAGCAAGGATGAGAGATACTCTGGAACAAGCAAGGGAACCAAATCTTAATCTGAAGGGCTACCTTCAAAATGCTTATGTGCATCCTGTTTTCAAAGACGACGATGAAGATGAGGATGAAGACTTTATGATGAAACTGGAGAACGATAGCGTTCTTGTCCCCACAAAACGCCAGTCAAGAATGAATACACCAGTTCCCAGCAAAGTCAGCGCTGGCTCATCTCCATCACTTTCTGATGCAGTTACTCATGAACATTAAACAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E272008" ref_strand="+" ref_description="SGN-E272008 [cLEM-8-B21]">
      <seq>aggcaatggatcctggaagcgttggtttcaacacaggagaaccacagatacaattatatttcttattggggcttgtctatgctgtggtcacaccatttctgcttccgttcatattggtcttctttggccttgcatatgtagtatatcgtcatcagattataaatgtttacaatcaggagtacgaaagtgcagcagcattctggccagatgttcatggacgtataattttcgcactgtgcttttctcagttatctttactaggcttgctaagtacaaaacatgctactcagtcagcacctttcctgattgcccttccagtgctgaccatctcatttcacttgtactgcaaaggtcgttatgagccagctttcaccaaatatccgatacaggaagcaaggatgagagatactctggaacaagcaagggaaccaaatcttaatctgaagggctaccttcaaaatgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="-" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="84084" stop="81907"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="83784" g_stop="83630" g_length="155"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="155" r_length="155" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="83629" i_stop="82647" i_length="983">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.720" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82646" g_stop="82413" g_length="234"/>
          <reference_exon_boundary r_type="cDNA" r_start="156" r_stop="389" r_length="234" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="82412" i_stop="82282" i_length="131">
            <donor d_prob="0.915" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="82281" g_stop="82207" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="390" r_stop="464" r_length="75" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="-" ref_id="SGN-E272008" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>464</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E272008" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="83784" e_stop="83630"/>
          <exon e_start="82646" e_stop="82413"/>
          <exon e_start="82281" e_stop="82207"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGCAATGGATCCTGGAAGCGTTGGTTTCAACACAGGAGAACCACAGATACAATTATATTTCTTATTGGGGCTTGTCTATGCTGTGGTCACACCATTTCTGCTTCCGTTCATATTGGTCTTCTTTGGCCTTGCATATGTAGTATATCGTCATCAGGTTCGTCTTCTCTCTTCCTTCTTATGCCTATATTTTCTGCAGAATCCCTAAAACGATTGGTGTCGCAGTTCCTATGAAAGCATCCTTCTTCATAACCTACATAATGTGGGGGGAATTGAATGTGGCAAAATAAGGTCATTGAGAATTTAAATACGGGAAATTCTGATAAAAGATGTATAGAAGATTTACTTAAGCCAAGAAAACAAAATAGATTCTTAATTAGTTACACCATTCGCATGAAAGGATAATAAAACATGATACTTATTGAATAAAATATCTATGTGATAAAATAAGCAAAAATTTGATTACTTCCTATGTGTCAATTTGTTTGTCTTACTTTCTCCTTTTAGTTTCTTTTAAAAAGAAGGTGACTTCTCTAGTTTTGACAACACTTTAATTTTAGTATCCCACATGGCATGTTTAAGATCATAAGATTAGAGGGATGATACACATTTTTATGTTTATGACCACAAGATTCAAAGATCTTATTTACTTTCTTAAACTCCGTGACAAGTCAAAATAAGACAAATAAATTGAAACGGATGACACTTCATTGTACTTGTAACGATTATGGTGTCAGTACAAAGTTGATAGCCTTTGAAGTAGTTATGTAGGCCCTACTTCTACTTAGTTGACATGCTAGGGATAACATCAGCTTTGATATTGGATCAGACATGGAATCCCATTGGTTCAAGTGTATGTTATGTTCATAGGAGTGTCGTTTTAATGTTGTTTCTTAGGCCACATGCAACACTTCATTGACTGGGGTATTTGCTAACTGGTAGTATTAATTCTTTCCACATTTAAAAATTAGACAAAGGGAATATGGAGTACTTGTACTGATGGAGATGCACCTATTAATTCCTAGTAAAATTTGTTGTCACCTATTTGCATATGCTAATTCTACTGATTTGAAATTGTTGATGTAGACATGGTTGCATGTTACAATTAGCGTTTTCTGACGCATTCTTTTCCTGAGACAGATTATAAATGTTTACAATCAGGAGTACGAAAGTGCAGCAGCATTCTGGCCAGATGTTCATGGACGTATAATTTTCGCACTGTGCTTTTCTCAGTTATCTTTACTAGGCTTGCTAAGTACAAAACATGCTACTCAGTCAGCACCTTTCCTGATTGCCCTTCCAGTGCTGACCATCTCATTTCACTTGTACTGCAAAGGTCGTTATGAGCCAGCTTTCACCAAATATCCGATACAGGTGTGTGTGGAAGTACATCTTGCAAATAAAAATTTCCACTGTTACAATAGTTTGAGCTCTCTTTTTTTTTTGTGAGGGTCCATTTTTTTTTTCTTCAAATGTCTACAATGCTATCTTCTTCTCTATTTCAGGAAGCAAGGATGAGAGATACTCTGGAACAAGCAAGGGAACCAAATCTTAATCTGAAGGGCTACCTTCAAAATGCT</genome_strand>
        <mrna_strand>AGGCAATGGATCCTGGAAGCGTTGGTTTCAACACAGGAGAACCACAGATACAATTATATTTCTTATTGGGGCTTGTCTATGCTGTGGTCACACCATTTCTGCTTCCGTTCATATTGGTCTTCTTTGGCCTTGCATATGTAGTATATCGTCATCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTATAAATGTTTACAATCAGGAGTACGAAAGTGCAGCAGCATTCTGGCCAGATGTTCATGGACGTATAATTTTCGCACTGTGCTTTTCTCAGTTATCTTTACTAGGCTTGCTAAGTACAAAACATGCTACTCAGTCAGCACCTTTCCTGATTGCCCTTCCAGTGCTGACCATCTCATTTCACTTGTACTGCAAAGGTCGTTATGAGCCAGCTTTCACCAAATATCCGATACAG...................................................................................................................................GAAGCAAGGATGAGAGATACTCTGGAACAAGCAAGGGAACCAAATCTTAATCTGAAGGGCTACCTTCAAAATGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E699135" ref_strand="+" ref_description="SGN-E699135 [FA08DB05]">
      <seq>cccctttctcaatcagtcggcaaaccaaatccctaaaacgattggtgtcgcagttcctatgaaagcatccttcttcataacctacataatggttgacggctgggctggtattgctggagagatcctaaggctgaagccgctaatattttaccacttgaagaactttttcttggttaagacggaaaaagatagagaagaggcaatggatcctggaagcgttggtttcaacacaggagaaccacagatacaattatatttcttattggggcttgtctatgctgtggtcacaccatttctgcttccgttcatattggtcttctttggccttgcatatgtagtatatcgtcatcagattataaatgtttacaatcaggagtaccaaagtgcagcagcattctggccagatgttcatggacgtataattttcgcactgtgcttttctcagttatctttactaggcttgctaagtacaaaacatgctactcacccagcacctttcctgattgcccttccagtgctgaccatctcatttcacttgtactgcaaaggtcgttatgagccagcctttcaccaaatatccccatacacgaagcacggatgagacatactctggaacaagcaagggaaccaaatcttaatctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="-" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="85393" stop="81928"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="85095" g_stop="85069" g_length="27"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="27" r_length="27" r_score="0.926"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="85068" i_stop="83955" i_length="1114">
            <donor d_prob="0.916" d_score="0.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="83954" g_stop="83630" g_length="325"/>
          <reference_exon_boundary r_type="cDNA" r_start="28" r_stop="352" r_length="325" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="83629" i_stop="82647" i_length="983">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.720" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="82646" g_stop="82413" g_length="234"/>
          <reference_exon_boundary r_type="cDNA" r_start="353" r_stop="588" r_length="236" r_score="0.962"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="82412" i_stop="82282" i_length="131">
            <donor d_prob="0.915" d_score="0.88"/>
            <acceptor a_prob="0.999" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="82281" g_stop="82228" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="589" r_stop="642" r_length="54" r_score="0.963"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="-" ref_id="SGN-E699135" ref_strand="+">
        <total_alignment_score>0.982</total_alignment_score>
        <cumulative_length_of_scored_exons>640</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E699135" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="85095" e_stop="85069"/>
          <exon e_start="83954" e_stop="83630"/>
          <exon e_start="82646" e_stop="82413"/>
          <exon e_start="82281" e_stop="82228"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TACCTTTCTCAATCAGTCGGCAAACCAGTACGTTTTTAACGAAAATATATTACTACATTCACCTCAGCCTTTCTTTAACTTGTGAATCAATGGGGAAATTTTGGGAATGCAGTTAGAGTGTGTTTCTTTATGTTGACATTGTCCACATAGATGTACTCTTTCAGTTCTGCTCTAATAAATTATTCAGAATTGTAAAACTGCAACGCCTTTGTACACCCGTATGGAGTTAAACATAACATCACTGAGATATCAGTTTCTGCGAAGCTCAGTCCTCTAGGGACTTGGTGAAATGTTTAATTGAGGGACCAGTTTTCTAGTCCTTGTAAAGTTGGGTGTTACAAGAAAACAGTAGATATGAAATTACAATGTATATATAAAGTAATTTTTTTTTTTATTTTTTAGGTATAGCGATAGATTTGTATTATGAACACAAGACAAGAGGTTGGCTTATTGATTTAGGGGTTCAAAATTTCACCTTGAGGTTCCAAGTTCAAGAGGTTGACAACTAGATTTTTGTTTTTTGAACTCCCCAAGTGAAAATCCTATATCCACCATTGGCTAGGAAACAATTCATATAGGCTAGGCTTCCTTGTTACAGATGGCCTCATCCAGTATGTGAAAATGGTCATGTAGACCATGCATGCTAATCATGTATATATGCTCTTTTACTATCCTAAAACCCATGCTGATTAACGAGATCGTTCCTGTTCACAGTTCCATGCCTGTAATAGTGTTTAAATTTCTAGTTCTAGAAGTATGTTACATGGACTTCTGTATGAATGTTGGATACTGGTATTGTGTTTGGCAAGTTTGTTCAGTTTCTAGAAGGTTTTCTTTGCACTTGAGAGGATTGTTAAGCTGTCCTATATTTGAAAAACTTAATTGTAGTATATTTAATGATGTCTTGTCTTCTTGAATAAGAGGAAATACATCTTTAGTCAATATACTAGTCCCTTTTGGTTCCAGCCAATATATGATTGGTTCTTTATGTGCTGATTCTGCTATTATATTTGTATCGCCAGTGTTATCCTATATTCTTATTAGGTGCATTCTAAGTTTTCCATTCTTTGGCAAGTCTTGCTAGTCCATATCCTTTTACTTGAGGCTCATCTTGCTATAAAACTTCCTATATTTTCTGCAGAATCCCTAAAACGATTGGTGTCGCAGTTCCTATGAAAGCATCCTTCTTCATAACCTACATAATGGTTGACGGCTGGGCTGGTATTGCTGGAGAGATCCTAAGGCTGAAGCCGCTAATATTTTACCACTTGAAGAACTTTTTCTTGGTTAAGACGGAAAAAGATAGAGAAGAGGCAATGGATCCTGGAAGCGTTGGTTTCAACACAGGAGAACCACAGATACAATTATATTTCTTATTGGGGCTTGTCTATGCTGTGGTCACACCATTTCTGCTTCCGTTCATATTGGTCTTCTTTGGCCTTGCATATGTAGTATATCGTCATCAGGTTCGTCTTCTCTCTTCCTTCTTATGCCTATATTTTCTGCAGAATCCCTAAAACGATTGGTGTCGCAGTTCCTATGAAAGCATCCTTCTTCATAACCTACATAATGTGGGGGGAATTGAATGTGGCAAAATAAGGTCATTGAGAATTTAAATACGGGAAATTCTGATAAAAGATGTATAGAAGATTTACTTAAGCCAAGAAAACAAAATAGATTCTTAATTAGTTACACCATTCGCATGAAAGGATAATAAAACATGATACTTATTGAATAAAATATCTATGTGATAAAATAAGCAAAAATTTGATTACTTCCTATGTGTCAATTTGTTTGTCTTACTTTCTCCTTTTAGTTTCTTTTAAAAAGAAGGTGACTTCTCTAGTTTTGACAACACTTTAATTTTAGTATCCCACATGGCATGTTTAAGATCATAAGATTAGAGGGATGATACACATTTTTATGTTTATGACCACAAGATTCAAAGATCTTATTTACTTTCTTAAACTCCGTGACAAGTCAAAATAAGACAAATAAATTGAAACGGATGACACTTCATTGTACTTGTAACGATTATGGTGTCAGTACAAAGTTGATAGCCTTTGAAGTAGTTATGTAGGCCCTACTTCTACTTAGTTGACATGCTAGGGATAACATCAGCTTTGATATTGGATCAGACATGGAATCCCATTGGTTCAAGTGTATGTTATGTTCATAGGAGTGTCGTTTTAATGTTGTTTCTTAGGCCACATGCAACACTTCATTGACTGGGGTATTTGCTAACTGGTAGTATTAATTCTTTCCACATTTAAAAATTAGACAAAGGGAATATGGAGTACTTGTACTGATGGAGATGCACCTATTAATTCCTAGTAAAATTTGTTGTCACCTATTTGCATATGCTAATTCTACTGATTTGAAATTGTTGATGTAGACATGGTTGCATGTTACAATTAGCGTTTTCTGACGCATTCTTTTCCTGAGACAGATTATAAATGTTTACAATCAGGAGTACGAAAGTGCAGCAGCATTCTGGCCAGATGTTCATGGACGTATAATTTTCGCACTGTGCTTTTCTCAGTTATCTTTACTAGGCTTGCTAAGTACAAAACATGCTACTCAGTCAGCACCTTTCCTGATTGCCCTTCCAGTGCTGACCATCTCATTTCACTTGTACTGCAAAGGTCGTTATGAGCCAG-CTTTCACCAAATAT-CCGATACAGGTGTGTGTGGAAGTACATCTTGCAAATAAAAATTTCCACTGTTACAATAGTTTGAGCTCTCTTTTTTTTTTGTGAGGGTCCATTTTTTTTTTCTTCAAATGTCTACAATGCTATCTTCTTCTCTATTTCAGGAAGCAAGGATGAGAGATACTCTGGAACAAGCAAGGGAACCAAATCTTAATCTG</genome_strand>
        <mrna_strand>CCCCTTTCTCAATCAGTCGGCAAACCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCCCTAAAACGATTGGTGTCGCAGTTCCTATGAAAGCATCCTTCTTCATAACCTACATAATGGTTGACGGCTGGGCTGGTATTGCTGGAGAGATCCTAAGGCTGAAGCCGCTAATATTTTACCACTTGAAGAACTTTTTCTTGGTTAAGACGGAAAAAGATAGAGAAGAGGCAATGGATCCTGGAAGCGTTGGTTTCAACACAGGAGAACCACAGATACAATTATATTTCTTATTGGGGCTTGTCTATGCTGTGGTCACACCATTTCTGCTTCCGTTCATATTGGTCTTCTTTGGCCTTGCATATGTAGTATATCGTCATCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTATAAATGTTTACAATCAGGAGTACCAAAGTGCAGCAGCATTCTGGCCAGATGTTCATGGACGTATAATTTTCGCACTGTGCTTTTCTCAGTTATCTTTACTAGGCTTGCTAAGTACAAAACATGCTACTCACCCAGCACCTTTCCTGATTGCCCTTCCAGTGCTGACCATCTCATTTCACTTGTACTGCAAAGGTCGTTATGAGCCAGCCTTTCACCAAATATCCCCATACAC...................................................................................................................................GAAGCACGGATGAGACATACTCTGGAACAAGCAAGGGAACCAAATCTTAATCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E737517" ref_strand="+" ref_description="SGN-E737517 [LC10AG02]">
      <seq>ggctgcaggaattcggcacgaggtgctttgaagatctttctcatatttctgccaactatattgatgatgatgtccaaattcgagggctggctaagcatatcagctctagagaggaaatctgcgtctaaatactacatcttcactatcgtgaatgtgttcctcgggaacataattgcaggagctgcatttgaacaactaagtacctttctcaatcagtcggcaaaccaaatccctaaaacgattggtgtcgcagttcctatgaaagcatccttcttcataacctacataatggttgacggctgggctggtattgctggagagatcctaaggctgaagccgctaatattttaccacttgaagaactttttcttggttaagacggaaaaagatagagaagaggcaatggatcctggaagcgttggtttcaacacaggagaaccacagatacaattatatttcttattggggcttgtctatgctgtggtcacaccatttctgcttccgttcatattggtcttctttggccttgcatatgtagtatatcgtcatcagattataaatgtttacaatcaggagtacgaaagtgcagcagcattctggccagatgttcatggacgtataattttcgcactgtgcttttctcagttatctttactaggcttgctaagtacaaaacatgctactcagtcagcacctttcctgattgcccttccagtgctgaccatctcatttcacttgtactgcaaaggtcgttatgagccagctttcaccaaatatccgatacaggaagcaaggatgagagatactctggaacaagca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="-" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="85572" stop="81949"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="85272" g_stop="85069" g_length="204"/>
          <reference_exon_boundary r_type="cDNA" r_start="24" r_stop="227" r_length="204" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="85068" i_stop="83955" i_length="1114">
            <donor d_prob="0.916" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="83954" g_stop="83630" g_length="325"/>
          <reference_exon_boundary r_type="cDNA" r_start="228" r_stop="552" r_length="325" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="83629" i_stop="82647" i_length="983">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.720" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="82646" g_stop="82413" g_length="234"/>
          <reference_exon_boundary r_type="cDNA" r_start="553" r_stop="786" r_length="234" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="82412" i_stop="82282" i_length="131">
            <donor d_prob="0.915" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="82281" g_stop="82249" g_length="33"/>
          <reference_exon_boundary r_type="cDNA" r_start="787" r_stop="819" r_length="33" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="-" ref_id="SGN-E737517" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>796</cumulative_length_of_scored_exons>
        <coverage percentage="0.972" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E737517" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="85272" e_stop="85069"/>
          <exon e_start="83954" e_stop="83630"/>
          <exon e_start="82646" e_stop="82413"/>
          <exon e_start="82281" e_stop="82249"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCTTTGAAGATCTTTCTCATATTTCTGCCAACTATATTGATGATGATGTCCAAATTCGAGGGCTGGCTAAGCATATCAGCTCTAGAGAGGAAATCTGCGTCTAAATACTACATCTTCACTATCGTGAATGTGTTCCTCGGGAACATAATTGCAGGAGCTGCATTTGAACAACTAAGTACCTTTCTCAATCAGTCGGCAAACCAGTACGTTTTTAACGAAAATATATTACTACATTCACCTCAGCCTTTCTTTAACTTGTGAATCAATGGGGAAATTTTGGGAATGCAGTTAGAGTGTGTTTCTTTATGTTGACATTGTCCACATAGATGTACTCTTTCAGTTCTGCTCTAATAAATTATTCAGAATTGTAAAACTGCAACGCCTTTGTACACCCGTATGGAGTTAAACATAACATCACTGAGATATCAGTTTCTGCGAAGCTCAGTCCTCTAGGGACTTGGTGAAATGTTTAATTGAGGGACCAGTTTTCTAGTCCTTGTAAAGTTGGGTGTTACAAGAAAACAGTAGATATGAAATTACAATGTATATATAAAGTAATTTTTTTTTTTATTTTTTAGGTATAGCGATAGATTTGTATTATGAACACAAGACAAGAGGTTGGCTTATTGATTTAGGGGTTCAAAATTTCACCTTGAGGTTCCAAGTTCAAGAGGTTGACAACTAGATTTTTGTTTTTTGAACTCCCCAAGTGAAAATCCTATATCCACCATTGGCTAGGAAACAATTCATATAGGCTAGGCTTCCTTGTTACAGATGGCCTCATCCAGTATGTGAAAATGGTCATGTAGACCATGCATGCTAATCATGTATATATGCTCTTTTACTATCCTAAAACCCATGCTGATTAACGAGATCGTTCCTGTTCACAGTTCCATGCCTGTAATAGTGTTTAAATTTCTAGTTCTAGAAGTATGTTACATGGACTTCTGTATGAATGTTGGATACTGGTATTGTGTTTGGCAAGTTTGTTCAGTTTCTAGAAGGTTTTCTTTGCACTTGAGAGGATTGTTAAGCTGTCCTATATTTGAAAAACTTAATTGTAGTATATTTAATGATGTCTTGTCTTCTTGAATAAGAGGAAATACATCTTTAGTCAATATACTAGTCCCTTTTGGTTCCAGCCAATATATGATTGGTTCTTTATGTGCTGATTCTGCTATTATATTTGTATCGCCAGTGTTATCCTATATTCTTATTAGGTGCATTCTAAGTTTTCCATTCTTTGGCAAGTCTTGCTAGTCCATATCCTTTTACTTGAGGCTCATCTTGCTATAAAACTTCCTATATTTTCTGCAGAATCCCTAAAACGATTGGTGTCGCAGTTCCTATGAAAGCATCCTTCTTCATAACCTACATAATGGTTGACGGCTGGGCTGGTATTGCTGGAGAGATCCTAAGGCTGAAGCCGCTAATATTTTACCACTTGAAGAACTTTTTCTTGGTTAAGACGGAAAAAGATAGAGAAGAGGCAATGGATCCTGGAAGCGTTGGTTTCAACACAGGAGAACCACAGATACAATTATATTTCTTATTGGGGCTTGTCTATGCTGTGGTCACACCATTTCTGCTTCCGTTCATATTGGTCTTCTTTGGCCTTGCATATGTAGTATATCGTCATCAGGTTCGTCTTCTCTCTTCCTTCTTATGCCTATATTTTCTGCAGAATCCCTAAAACGATTGGTGTCGCAGTTCCTATGAAAGCATCCTTCTTCATAACCTACATAATGTGGGGGGAATTGAATGTGGCAAAATAAGGTCATTGAGAATTTAAATACGGGAAATTCTGATAAAAGATGTATAGAAGATTTACTTAAGCCAAGAAAACAAAATAGATTCTTAATTAGTTACACCATTCGCATGAAAGGATAATAAAACATGATACTTATTGAATAAAATATCTATGTGATAAAATAAGCAAAAATTTGATTACTTCCTATGTGTCAATTTGTTTGTCTTACTTTCTCCTTTTAGTTTCTTTTAAAAAGAAGGTGACTTCTCTAGTTTTGACAACACTTTAATTTTAGTATCCCACATGGCATGTTTAAGATCATAAGATTAGAGGGATGATACACATTTTTATGTTTATGACCACAAGATTCAAAGATCTTATTTACTTTCTTAAACTCCGTGACAAGTCAAAATAAGACAAATAAATTGAAACGGATGACACTTCATTGTACTTGTAACGATTATGGTGTCAGTACAAAGTTGATAGCCTTTGAAGTAGTTATGTAGGCCCTACTTCTACTTAGTTGACATGCTAGGGATAACATCAGCTTTGATATTGGATCAGACATGGAATCCCATTGGTTCAAGTGTATGTTATGTTCATAGGAGTGTCGTTTTAATGTTGTTTCTTAGGCCACATGCAACACTTCATTGACTGGGGTATTTGCTAACTGGTAGTATTAATTCTTTCCACATTTAAAAATTAGACAAAGGGAATATGGAGTACTTGTACTGATGGAGATGCACCTATTAATTCCTAGTAAAATTTGTTGTCACCTATTTGCATATGCTAATTCTACTGATTTGAAATTGTTGATGTAGACATGGTTGCATGTTACAATTAGCGTTTTCTGACGCATTCTTTTCCTGAGACAGATTATAAATGTTTACAATCAGGAGTACGAAAGTGCAGCAGCATTCTGGCCAGATGTTCATGGACGTATAATTTTCGCACTGTGCTTTTCTCAGTTATCTTTACTAGGCTTGCTAAGTACAAAACATGCTACTCAGTCAGCACCTTTCCTGATTGCCCTTCCAGTGCTGACCATCTCATTTCACTTGTACTGCAAAGGTCGTTATGAGCCAGCTTTCACCAAATATCCGATACAGGTGTGTGTGGAAGTACATCTTGCAAATAAAAATTTCCACTGTTACAATAGTTTGAGCTCTCTTTTTTTTTTGTGAGGGTCCATTTTTTTTTTCTTCAAATGTCTACAATGCTATCTTCTTCTCTATTTCAGGAAGCAAGGATGAGAGATACTCTGGAACAAGCA</genome_strand>
        <mrna_strand>TGCTTTGAAGATCTTTCTCATATTTCTGCCAACTATATTGATGATGATGTCCAAATTCGAGGGCTGGCTAAGCATATCAGCTCTAGAGAGGAAATCTGCGTCTAAATACTACATCTTCACTATCGTGAATGTGTTCCTCGGGAACATAATTGCAGGAGCTGCATTTGAACAACTAAGTACCTTTCTCAATCAGTCGGCAAACCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCCCTAAAACGATTGGTGTCGCAGTTCCTATGAAAGCATCCTTCTTCATAACCTACATAATGGTTGACGGCTGGGCTGGTATTGCTGGAGAGATCCTAAGGCTGAAGCCGCTAATATTTTACCACTTGAAGAACTTTTTCTTGGTTAAGACGGAAAAAGATAGAGAAGAGGCAATGGATCCTGGAAGCGTTGGTTTCAACACAGGAGAACCACAGATACAATTATATTTCTTATTGGGGCTTGTCTATGCTGTGGTCACACCATTTCTGCTTCCGTTCATATTGGTCTTCTTTGGCCTTGCATATGTAGTATATCGTCATCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTATAAATGTTTACAATCAGGAGTACGAAAGTGCAGCAGCATTCTGGCCAGATGTTCATGGACGTATAATTTTCGCACTGTGCTTTTCTCAGTTATCTTTACTAGGCTTGCTAAGTACAAAACATGCTACTCAGTCAGCACCTTTCCTGATTGCCCTTCCAGTGCTGACCATCTCATTTCACTTGTACTGCAAAGGTCGTTATGAGCCAGCTTTCACCAAATATCCGATACAG...................................................................................................................................GAAGCAAGGATGAGAGATACTCTGGAACAAGCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E598359" ref_strand="+" ref_description="SGN-E598359 [74030]">
      <seq>atgctgtggtcacaccatttctgcttccggttcatattggtcttctttggcctcgcatatgtagtatatcgtcatcagattataaattgtatacaatcaggagtacgaaagtgcagcagcattctggccagatgttcatggacgtataaattttcggcactgtgcttttctccagttatctctactgggcttgctttggtacaaaacatgctactcagtcagcacctttcctgattgcccttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="-" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="84006" stop="82187"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="83706" g_stop="83630" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="78" r_length="78" r_score="0.961"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="83629" i_stop="82647" i_length="983">
            <donor d_prob="0.998" d_score="0.94"/>
            <acceptor a_prob="0.720" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82646" g_stop="82487" g_length="160"/>
          <reference_exon_boundary r_type="cDNA" r_start="79" r_stop="243" r_length="165" r_score="0.906"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="-" ref_id="SGN-E598359" ref_strand="+">
        <total_alignment_score>0.924</total_alignment_score>
        <cumulative_length_of_scored_exons>237</cumulative_length_of_scored_exons>
        <coverage percentage="0.975" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E598359" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="83706" e_stop="83630"/>
          <exon e_start="82646" e_stop="82487"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGCTGTGGTCACACCATTTCTGCTTCC-GTTCATATTGGTCTTCTTTGGCCTTGCATATGTAGTATATCGTCATCAGGTTCGTCTTCTCTCTTCCTTCTTATGCCTATATTTTCTGCAGAATCCCTAAAACGATTGGTGTCGCAGTTCCTATGAAAGCATCCTTCTTCATAACCTACATAATGTGGGGGGAATTGAATGTGGCAAAATAAGGTCATTGAGAATTTAAATACGGGAAATTCTGATAAAAGATGTATAGAAGATTTACTTAAGCCAAGAAAACAAAATAGATTCTTAATTAGTTACACCATTCGCATGAAAGGATAATAAAACATGATACTTATTGAATAAAATATCTATGTGATAAAATAAGCAAAAATTTGATTACTTCCTATGTGTCAATTTGTTTGTCTTACTTTCTCCTTTTAGTTTCTTTTAAAAAGAAGGTGACTTCTCTAGTTTTGACAACACTTTAATTTTAGTATCCCACATGGCATGTTTAAGATCATAAGATTAGAGGGATGATACACATTTTTATGTTTATGACCACAAGATTCAAAGATCTTATTTACTTTCTTAAACTCCGTGACAAGTCAAAATAAGACAAATAAATTGAAACGGATGACACTTCATTGTACTTGTAACGATTATGGTGTCAGTACAAAGTTGATAGCCTTTGAAGTAGTTATGTAGGCCCTACTTCTACTTAGTTGACATGCTAGGGATAACATCAGCTTTGATATTGGATCAGACATGGAATCCCATTGGTTCAAGTGTATGTTATGTTCATAGGAGTGTCGTTTTAATGTTGTTTCTTAGGCCACATGCAACACTTCATTGACTGGGGTATTTGCTAACTGGTAGTATTAATTCTTTCCACATTTAAAAATTAGACAAAGGGAATATGGAGTACTTGTACTGATGGAGATGCACCTATTAATTCCTAGTAAAATTTGTTGTCACCTATTTGCATATGCTAATTCTACTGATTTGAAATTGTTGATGTAGACATGGTTGCATGTTACAATTAGCGTTTTCTGACGCATTCTTTTCCTGAGACAGATTATAAA-TGTTTACAATCAGGAGTACGAAAGTGCAGCAGCATTCTGGCCAGATGTTCATGGACGTAT-AATTTTC-GCACTGTGCTTTTCT-CAGTTATCTTTACTAGGCTTGC-TAAGTACAAAACATGCTACTCAGTCAGCACCTTTCCTGATTGCCCTTC</genome_strand>
        <mrna_strand>ATGCTGTGGTCACACCATTTCTGCTTCCGGTTCATATTGGTCTTCTTTGGCCTCGCATATGTAGTATATCGTCATCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTATAAATTGTATACAATCAGGAGTACGAAAGTGCAGCAGCATTCTGGCCAGATGTTCATGGACGTATAAATTTTCGGCACTGTGCTTTTCTCCAGTTATCTCTACTGGGCTTGCTTTGGTACAAAACATGCTACTCAGTCAGCACCTTTCCTGATTGCCCTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E543510" ref_strand="+" ref_description="SGN-E543510 [TUS-65-F20]">
      <seq>gtacacttaaggatgttcatcattgctgttgccttcttttttctgacattcttcttcatgatcccgattgcatttgtccaaacccttgccagccttgaggggattaggaagaaagcaccatttctgaaagttattattgacgaacctttcatcaaggcgttcatccaaggttttctacctgggattgctttgaagatctttctcatatttctgccaactatattgatgatgatgtccaaattcgagggctggctaagcatatcagctctagagaggaaatctgcgtctaaatactacatcttcactatcgtgaatgtgttcctcgggaacataattgcaggagctgcatttgaacaactaagtacctttctcaatcagtcggcaaaccaaatccctaaaacgattggtgtcgcagttcctatgaaagcatccttcttcataacctacataatggttgacggctgggctggtattgctggagagatcctaaggctgaagccgctaatattttaccacttgaagaactttttcttggttaagacggaaaaagatagagaagaggcaatggatcctggaagcgttggtttcaacacaggagaaccacagatacaattatatttcttattggggcttgtctatgctgtggtcacaccatttctgcttccgttcatattggtcttctttggccttgcatatgtagtatatcgtcatcagattataaatggttacaatcaggagtacgaaagtgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="-" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="86663" stop="82312"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="86365" g_stop="86224" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="143" r_length="143" r_score="0.951"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="86223" i_stop="85315" i_length="909">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="85314" g_stop="85069" g_length="246"/>
          <reference_exon_boundary r_type="cDNA" r_start="144" r_stop="389" r_length="246" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="85068" i_stop="83955" i_length="1114">
            <donor d_prob="0.916" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="83954" g_stop="83630" g_length="325"/>
          <reference_exon_boundary r_type="cDNA" r_start="390" r_stop="714" r_length="325" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="83629" i_stop="82647" i_length="983">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.720" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="82646" g_stop="82612" g_length="35"/>
          <reference_exon_boundary r_type="cDNA" r_start="715" r_stop="749" r_length="35" r_score="0.971"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="-" ref_id="SGN-E543510" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>748</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E543510" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="86365" e_stop="86224"/>
          <exon e_start="85314" e_stop="85069"/>
          <exon e_start="83954" e_stop="83630"/>
          <exon e_start="82646" e_stop="82612"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGACAATTA-GGAAGCTCATCATTGCTGTTGCCTTCTTTTTTCTGACATTCTTCTTCATGATCCCGATTGCATTTGTCCAAACCCTTGCCAGCCTTGAGGGGATTAGGAAGAAAGCACCATTTCTGAAAGTTATTATTGACGAGTGAGTACCACATTACACCCTTGTTGTGAATTCAGCCTCATCTCTCATTAGTTTTTTGTCATACTCATGATCCTTGATGGTGATATGACACCTTGGTTCATTCATTTCAAGACTCTAGTGACAGTAATTCAAAAAACAAAATGTATTTATGGTTTTTGGTGCCATCAGGTCTTTGTTTTTTTGGTACAATCAGGTCTACTCAGAAGATACTATATCTATCCTAGACACTTTAGGTTTGCTCACTTGTATATATGGTTTCAGTACAACCCATTACTGATTTGTGCTTACTACATACAACCGTTACCTTCTCAAAAAAAAACAAAAAACAGAATCTAGTGGTTTGTGTTTTTACCTTTGTCCATTTATTTTAAGTCTTTTCGTGAGAACAATTTCAAAAACAAAATTTAGTGGTTTGATATTTGTGTGTACTTGCTGGAACTTGTTTGACATTGAAGCTAGGAGAATTGTGTGAATTTTGCATAGTTAGTTTAGCTTTGTATGATTTGTGTCATCTCATTCCTTGAGATACTTTATCGCTTTTACATTATGTCATCACTCACAAAAGAGATGTTTGACAAAAGTATGCAACCTAGAAATGCTATTTTCTATTTTACATAGTGAGATGATCCATGGATTTCTGATTTCTTTGCGATGCTAAATTGACATCACAAGTAATACACAGCAATGAAACACTATCTATATATGCTGAATTTACTCTGCTAGTGGTTCTTCCAAATTCTTTTCTTGCTTTCTCCTCTCTGTTTTGGTCTTTGTGCTGAGGAATGGGCTGTTATATGAGTTGGTATTTTTGCCAATCATGATCATAGCAGTCATGCACCAGCTTATCTCAAATGTAGGTTTTTTTGGTTACTCTTTTATGCCTAATAATTCTACTGATTTATCATGCAGACCTTTCATCAAGGCGTTCATCCAAGGTTTTCTACCTGGGATTGCTTTGAAGATCTTTCTCATATTTCTGCCAACTATATTGATGATGATGTCCAAATTCGAGGGCTGGCTAAGCATATCAGCTCTAGAGAGGAAATCTGCGTCTAAATACTACATCTTCACTATCGTGAATGTGTTCCTCGGGAACATAATTGCAGGAGCTGCATTTGAACAACTAAGTACCTTTCTCAATCAGTCGGCAAACCAGTACGTTTTTAACGAAAATATATTACTACATTCACCTCAGCCTTTCTTTAACTTGTGAATCAATGGGGAAATTTTGGGAATGCAGTTAGAGTGTGTTTCTTTATGTTGACATTGTCCACATAGATGTACTCTTTCAGTTCTGCTCTAATAAATTATTCAGAATTGTAAAACTGCAACGCCTTTGTACACCCGTATGGAGTTAAACATAACATCACTGAGATATCAGTTTCTGCGAAGCTCAGTCCTCTAGGGACTTGGTGAAATGTTTAATTGAGGGACCAGTTTTCTAGTCCTTGTAAAGTTGGGTGTTACAAGAAAACAGTAGATATGAAATTACAATGTATATATAAAGTAATTTTTTTTTTTATTTTTTAGGTATAGCGATAGATTTGTATTATGAACACAAGACAAGAGGTTGGCTTATTGATTTAGGGGTTCAAAATTTCACCTTGAGGTTCCAAGTTCAAGAGGTTGACAACTAGATTTTTGTTTTTTGAACTCCCCAAGTGAAAATCCTATATCCACCATTGGCTAGGAAACAATTCATATAGGCTAGGCTTCCTTGTTACAGATGGCCTCATCCAGTATGTGAAAATGGTCATGTAGACCATGCATGCTAATCATGTATATATGCTCTTTTACTATCCTAAAACCCATGCTGATTAACGAGATCGTTCCTGTTCACAGTTCCATGCCTGTAATAGTGTTTAAATTTCTAGTTCTAGAAGTATGTTACATGGACTTCTGTATGAATGTTGGATACTGGTATTGTGTTTGGCAAGTTTGTTCAGTTTCTAGAAGGTTTTCTTTGCACTTGAGAGGATTGTTAAGCTGTCCTATATTTGAAAAACTTAATTGTAGTATATTTAATGATGTCTTGTCTTCTTGAATAAGAGGAAATACATCTTTAGTCAATATACTAGTCCCTTTTGGTTCCAGCCAATATATGATTGGTTCTTTATGTGCTGATTCTGCTATTATATTTGTATCGCCAGTGTTATCCTATATTCTTATTAGGTGCATTCTAAGTTTTCCATTCTTTGGCAAGTCTTGCTAGTCCATATCCTTTTACTTGAGGCTCATCTTGCTATAAAACTTCCTATATTTTCTGCAGAATCCCTAAAACGATTGGTGTCGCAGTTCCTATGAAAGCATCCTTCTTCATAACCTACATAATGGTTGACGGCTGGGCTGGTATTGCTGGAGAGATCCTAAGGCTGAAGCCGCTAATATTTTACCACTTGAAGAACTTTTTCTTGGTTAAGACGGAAAAAGATAGAGAAGAGGCAATGGATCCTGGAAGCGTTGGTTTCAACACAGGAGAACCACAGATACAATTATATTTCTTATTGGGGCTTGTCTATGCTGTGGTCACACCATTTCTGCTTCCGTTCATATTGGTCTTCTTTGGCCTTGCATATGTAGTATATCGTCATCAGGTTCGTCTTCTCTCTTCCTTCTTATGCCTATATTTTCTGCAGAATCCCTAAAACGATTGGTGTCGCAGTTCCTATGAAAGCATCCTTCTTCATAACCTACATAATGTGGGGGGAATTGAATGTGGCAAAATAAGGTCATTGAGAATTTAAATACGGGAAATTCTGATAAAAGATGTATAGAAGATTTACTTAAGCCAAGAAAACAAAATAGATTCTTAATTAGTTACACCATTCGCATGAAAGGATAATAAAACATGATACTTATTGAATAAAATATCTATGTGATAAAATAAGCAAAAATTTGATTACTTCCTATGTGTCAATTTGTTTGTCTTACTTTCTCCTTTTAGTTTCTTTTAAAAAGAAGGTGACTTCTCTAGTTTTGACAACACTTTAATTTTAGTATCCCACATGGCATGTTTAAGATCATAAGATTAGAGGGATGATACACATTTTTATGTTTATGACCACAAGATTCAAAGATCTTATTTACTTTCTTAAACTCCGTGACAAGTCAAAATAAGACAAATAAATTGAAACGGATGACACTTCATTGTACTTGTAACGATTATGGTGTCAGTACAAAGTTGATAGCCTTTGAAGTAGTTATGTAGGCCCTACTTCTACTTAGTTGACATGCTAGGGATAACATCAGCTTTGATATTGGATCAGACATGGAATCCCATTGGTTCAAGTGTATGTTATGTTCATAGGAGTGTCGTTTTAATGTTGTTTCTTAGGCCACATGCAACACTTCATTGACTGGGGTATTTGCTAACTGGTAGTATTAATTCTTTCCACATTTAAAAATTAGACAAAGGGAATATGGAGTACTTGTACTGATGGAGATGCACCTATTAATTCCTAGTAAAATTTGTTGTCACCTATTTGCATATGCTAATTCTACTGATTTGAAATTGTTGATGTAGACATGGTTGCATGTTACAATTAGCGTTTTCTGACGCATTCTTTTCCTGAGACAGATTATAAATGTTTACAATCAGGAGTACGAAAGTGC</genome_strand>
        <mrna_strand>GTACACTTAAGGATGTTCATCATTGCTGTTGCCTTCTTTTTTCTGACATTCTTCTTCATGATCCCGATTGCATTTGTCCAAACCCTTGCCAGCCTTGAGGGGATTAGGAAGAAAGCACCATTTCTGAAAGTTATTATTGACGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCTTTCATCAAGGCGTTCATCCAAGGTTTTCTACCTGGGATTGCTTTGAAGATCTTTCTCATATTTCTGCCAACTATATTGATGATGATGTCCAAATTCGAGGGCTGGCTAAGCATATCAGCTCTAGAGAGGAAATCTGCGTCTAAATACTACATCTTCACTATCGTGAATGTGTTCCTCGGGAACATAATTGCAGGAGCTGCATTTGAACAACTAAGTACCTTTCTCAATCAGTCGGCAAACCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCCCTAAAACGATTGGTGTCGCAGTTCCTATGAAAGCATCCTTCTTCATAACCTACATAATGGTTGACGGCTGGGCTGGTATTGCTGGAGAGATCCTAAGGCTGAAGCCGCTAATATTTTACCACTTGAAGAACTTTTTCTTGGTTAAGACGGAAAAAGATAGAGAAGAGGCAATGGATCCTGGAAGCGTTGGTTTCAACACAGGAGAACCACAGATACAATTATATTTCTTATTGGGGCTTGTCTATGCTGTGGTCACACCATTTCTGCTTCCGTTCATATTGGTCTTCTTTGGCCTTGCATATGTAGTATATCGTCATCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTATAAATGGTTACAATCAGGAGTACGAAAGTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E304812" ref_strand="+" ref_description="SGN-E304812 [cLEX-10-F11]">
      <seq>tacacttaaggatgttcatcattgctgttgccttcttttttctgacattcttcttcatgatcccgattgcatttgtccaaacccttgccagccttgaggggattaggaagaaagcaccatttctgaaagttattattgacgaacctttcatcaaggcgttcatccaaggttttctacctgggattgctttgaagatctttctcatatttctgccaactatattgatgatgatgtccaaattcgagggctggctaagcatatcagctctagagaggaaatctgcgtctaaatactacatcttcactatcgtgaatgtgttcctcgggaacataattgcaggagctgcatttgaacaactaagtacctttctcaatcagtcggcaaaccaaatccctaaaacgattggtgtcgcagttcctatgaaagcatccttcttcataacctacataatggttgacggctgggctggtattgctggagagatcctaaggctgaagccgctaatattttaccacttgaagaacttttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="-" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="86663" stop="83514"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="86364" g_stop="86224" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="142" r_length="142" r_score="0.957"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="86223" i_stop="85315" i_length="909">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="85314" g_stop="85069" g_length="246"/>
          <reference_exon_boundary r_type="cDNA" r_start="143" r_stop="388" r_length="246" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="85068" i_stop="83955" i_length="1114">
            <donor d_prob="0.916" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="83954" g_stop="83814" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="389" r_stop="529" r_length="141" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="-" ref_id="SGN-E304812" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>528</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E304812" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="86364" e_stop="86224"/>
          <exon e_start="85314" e_stop="85069"/>
          <exon e_start="83954" e_stop="83814"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GACAATTA-GGAAGCTCATCATTGCTGTTGCCTTCTTTTTTCTGACATTCTTCTTCATGATCCCGATTGCATTTGTCCAAACCCTTGCCAGCCTTGAGGGGATTAGGAAGAAAGCACCATTTCTGAAAGTTATTATTGACGAGTGAGTACCACATTACACCCTTGTTGTGAATTCAGCCTCATCTCTCATTAGTTTTTTGTCATACTCATGATCCTTGATGGTGATATGACACCTTGGTTCATTCATTTCAAGACTCTAGTGACAGTAATTCAAAAAACAAAATGTATTTATGGTTTTTGGTGCCATCAGGTCTTTGTTTTTTTGGTACAATCAGGTCTACTCAGAAGATACTATATCTATCCTAGACACTTTAGGTTTGCTCACTTGTATATATGGTTTCAGTACAACCCATTACTGATTTGTGCTTACTACATACAACCGTTACCTTCTCAAAAAAAAACAAAAAACAGAATCTAGTGGTTTGTGTTTTTACCTTTGTCCATTTATTTTAAGTCTTTTCGTGAGAACAATTTCAAAAACAAAATTTAGTGGTTTGATATTTGTGTGTACTTGCTGGAACTTGTTTGACATTGAAGCTAGGAGAATTGTGTGAATTTTGCATAGTTAGTTTAGCTTTGTATGATTTGTGTCATCTCATTCCTTGAGATACTTTATCGCTTTTACATTATGTCATCACTCACAAAAGAGATGTTTGACAAAAGTATGCAACCTAGAAATGCTATTTTCTATTTTACATAGTGAGATGATCCATGGATTTCTGATTTCTTTGCGATGCTAAATTGACATCACAAGTAATACACAGCAATGAAACACTATCTATATATGCTGAATTTACTCTGCTAGTGGTTCTTCCAAATTCTTTTCTTGCTTTCTCCTCTCTGTTTTGGTCTTTGTGCTGAGGAATGGGCTGTTATATGAGTTGGTATTTTTGCCAATCATGATCATAGCAGTCATGCACCAGCTTATCTCAAATGTAGGTTTTTTTGGTTACTCTTTTATGCCTAATAATTCTACTGATTTATCATGCAGACCTTTCATCAAGGCGTTCATCCAAGGTTTTCTACCTGGGATTGCTTTGAAGATCTTTCTCATATTTCTGCCAACTATATTGATGATGATGTCCAAATTCGAGGGCTGGCTAAGCATATCAGCTCTAGAGAGGAAATCTGCGTCTAAATACTACATCTTCACTATCGTGAATGTGTTCCTCGGGAACATAATTGCAGGAGCTGCATTTGAACAACTAAGTACCTTTCTCAATCAGTCGGCAAACCAGTACGTTTTTAACGAAAATATATTACTACATTCACCTCAGCCTTTCTTTAACTTGTGAATCAATGGGGAAATTTTGGGAATGCAGTTAGAGTGTGTTTCTTTATGTTGACATTGTCCACATAGATGTACTCTTTCAGTTCTGCTCTAATAAATTATTCAGAATTGTAAAACTGCAACGCCTTTGTACACCCGTATGGAGTTAAACATAACATCACTGAGATATCAGTTTCTGCGAAGCTCAGTCCTCTAGGGACTTGGTGAAATGTTTAATTGAGGGACCAGTTTTCTAGTCCTTGTAAAGTTGGGTGTTACAAGAAAACAGTAGATATGAAATTACAATGTATATATAAAGTAATTTTTTTTTTTATTTTTTAGGTATAGCGATAGATTTGTATTATGAACACAAGACAAGAGGTTGGCTTATTGATTTAGGGGTTCAAAATTTCACCTTGAGGTTCCAAGTTCAAGAGGTTGACAACTAGATTTTTGTTTTTTGAACTCCCCAAGTGAAAATCCTATATCCACCATTGGCTAGGAAACAATTCATATAGGCTAGGCTTCCTTGTTACAGATGGCCTCATCCAGTATGTGAAAATGGTCATGTAGACCATGCATGCTAATCATGTATATATGCTCTTTTACTATCCTAAAACCCATGCTGATTAACGAGATCGTTCCTGTTCACAGTTCCATGCCTGTAATAGTGTTTAAATTTCTAGTTCTAGAAGTATGTTACATGGACTTCTGTATGAATGTTGGATACTGGTATTGTGTTTGGCAAGTTTGTTCAGTTTCTAGAAGGTTTTCTTTGCACTTGAGAGGATTGTTAAGCTGTCCTATATTTGAAAAACTTAATTGTAGTATATTTAATGATGTCTTGTCTTCTTGAATAAGAGGAAATACATCTTTAGTCAATATACTAGTCCCTTTTGGTTCCAGCCAATATATGATTGGTTCTTTATGTGCTGATTCTGCTATTATATTTGTATCGCCAGTGTTATCCTATATTCTTATTAGGTGCATTCTAAGTTTTCCATTCTTTGGCAAGTCTTGCTAGTCCATATCCTTTTACTTGAGGCTCATCTTGCTATAAAACTTCCTATATTTTCTGCAGAATCCCTAAAACGATTGGTGTCGCAGTTCCTATGAAAGCATCCTTCTTCATAACCTACATAATGGTTGACGGCTGGGCTGGTATTGCTGGAGAGATCCTAAGGCTGAAGCCGCTAATATTTTACCACTTGAAGAACTTTTT</genome_strand>
        <mrna_strand>TACACTTAAGGATGTTCATCATTGCTGTTGCCTTCTTTTTTCTGACATTCTTCTTCATGATCCCGATTGCATTTGTCCAAACCCTTGCCAGCCTTGAGGGGATTAGGAAGAAAGCACCATTTCTGAAAGTTATTATTGACGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCTTTCATCAAGGCGTTCATCCAAGGTTTTCTACCTGGGATTGCTTTGAAGATCTTTCTCATATTTCTGCCAACTATATTGATGATGATGTCCAAATTCGAGGGCTGGCTAAGCATATCAGCTCTAGAGAGGAAATCTGCGTCTAAATACTACATCTTCACTATCGTGAATGTGTTCCTCGGGAACATAATTGCAGGAGCTGCATTTGAACAACTAAGTACCTTTCTCAATCAGTCGGCAAACCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCCCTAAAACGATTGGTGTCGCAGTTCCTATGAAAGCATCCTTCTTCATAACCTACATAATGGTTGACGGCTGGGCTGGTATTGCTGGAGAGATCCTAAGGCTGAAGCCGCTAATATTTTACCACTTGAAGAACTTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E365243" ref_strand="+" ref_description="SGN-E365243 [cLPT-16-I19]">
      <seq>atgaatcagttagtgaatgtgtggagcactttttcctggttaaccatcaagatcattatctcatgcatcagggtgtttataatgccaacaaactagcaaaattggtgaaggagaagaagagtaagcaaaattggctcgactattaccaacttaagtactctagggatcaatcaaaacggcctacgatgaagactggtttccttggatgctttggagcaaaagtcgacgcaattgagcatcacattgctgaaattgagagattgacaaaagagatagctgaagagaaacaaagggtagaaaaagacccaaagtctaccatgcctgcatcatttgtctccttcaaatcgcggtggggtgctgctgtttgtgcacaaacacagcaatccagaaatccaaccttgtggttgacagaatgggctccagagccacgtgatgtattttgggacaacctggcaatcccctatgtttctttgacaattaggaagctcatcattgctgttgccttcttttttctgacattcttcttcatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="-" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="89640" stop="86007"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="89340" g_stop="89270" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="71" r_length="71" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="89269" i_stop="87752" i_length="1518">
            <donor d_prob="0.953" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="87751" g_stop="87632" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="72" r_stop="191" r_length="120" r_score="0.983"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="87631" i_stop="87480" i_length="152">
            <donor d_prob="0.995" d_score="0.98"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="87479" g_stop="87399" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="192" r_stop="272" r_length="81" r_score="0.975"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="87398" i_stop="86565" i_length="834">
            <donor d_prob="0.998" d_score="0.96"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="86564" g_stop="86307" g_length="258"/>
          <reference_exon_boundary r_type="cDNA" r_start="273" r_stop="530" r_length="258" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="-" ref_id="SGN-E365243" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>530</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E365243" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="89340" e_stop="89270"/>
          <exon e_start="87751" e_stop="87632"/>
          <exon e_start="87479" e_stop="87399"/>
          <exon e_start="86564" e_stop="86307"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGAATCAGTTAGTGAATGTGTGGAGCACTTTTTCCTGGTTAACCATCAAGATCATTATCTCATGCATCAGGTTCGAACTTGCTGGAATACAAGTATCTCATGCTGTTTTACTGATAGAAAAGACAAGTATCTCATATTGTTTTGAGGAAGTAGTGATATATTTTTTGTTTCTGAAATTATGCTCCTTGTTGAAGCCCCCCAAACTTTGGGCTAGTGATAACTGATAAGACGCGGTGCGTGATGAATGGGTTAGGCGCATGTCACAGTTCGAATCCATATTGTATTTTGCAACCATCTCATTTAAATTCTTAAGTGGTTAGACGGTGTCACACTTTTATCTAGCTTCTAATACTCCCTACCATGTAGATGGATGGGGGGTGTAGTTTAGGTTGGTATATCTTCTCATGGACAAGTATCATTTCGCCAGAAGCCCTTGGCTGGGAACAGGACTGGCTACTCTTTTGAGACGAGACTATAAACATGTTTGATATGTCAGTTCCATAGATATGGAGTCTTCATTGCTTGTTATGTTTATTTCTTTATGTGTTCTTCATTTTGAGATATAATAAATAAGAAGTAAGCAGTAGTGTTCATCTTGATATGGAGGACACCAATTTGTGCTTCTTTTTTTCCACTTAGAAACTTTCGGTATAGGCTTTCTTGAACAAATCATTTTAGTTCACCATGGGAAGGGGCACTAGTAAAATTCAATATAGAATATTTTTTTTTGTGAACTTTTTATAAGTTAATCCCACCAAATAGTATTTTTAATATATATGGCATCTGGGCACACCTTGACTAATTCTATGTGGTACCTGCTTCCTACCATAGGTATCTGGTAACTCTATCCACCGAGACTGCAGTAGGAATCACCTAATGTGCGCCTAGGATTCTCAACCCGCTTCATTGGCAATTAGGCCATACCCATGGGTGCAATCGACCAATTAGGTCGACTCTCAATGTAGAATTGTCTTACATTGAGCCCACCCAAATGTCAAAATCTTCATTAGTATTGCTTATTTTATTACTGCAGTAGGAGAAATTAAGGACTCGTGGCTTAGCACAAGGAAAACAACTAGTTCTGCCGGCGAAGAGGTTGGCAAAGACATTAGGAACTAAAGTGGAGTATTAGAAGTAAGTTATGATGCGACAACATAACATGAAAGAGGGCAAAAATCTGAATATAACTTAAAGGTAGGGAATAGAAGTATGAATCTTCCAGTATGGATTTTTTTGTGAGAAACCTTCTGAAAGTTTTGTAAGTCATCTTAAAAGCTATTATCTAATTTAGTAATTGAAATTTCAATGTACAATTTTTTCTGCAAGTTTGTTCTTTTATCATCCCTAATGCTTCTTTTCATGGAAGTTATCAGCATTTATTATCCCTTGTAAGATAATTATTCGTCAGTTTGTGCTCTGATAGGATGGTCTTAGATTTTACTATCCTCTGAGAAAAGTTATCTGCATGTTAAATATTTCAGTATGATGGACTAAAATTTCTTATTATATGCAAATTCTTCATATATGCTTTATTTTTTATGTTGATATGCTATTTCATCTTTATTCACTTAGTTGGATTTTACTATAGGGTGTTTATAATGCCAACAAACTGGCAAAATTGGTGAAGGAGAAGAAGAGTAAGCAAAATTGGCTCGACTATTACCAACTTAAGTACTCTAGGGATCAATCAAAACGGCCTATGATGAAGGTATGGATTTGTCCCTGATCCTACAGATTGTTATTTTTAACTTCTAATATCGCAAAGTATGTTCTGAGGCTCAATTAGTACTTCGTTAACTTAGTTTTGTCTACCTCTAAATAGGTAAGTTGTTTCAGTGCATTCTTTTTCAAAATTTGCAGACTGGTTTCCTTGGATGCTTTGGAGCAAAAGTCGACGCAATTGAGCATCAGATTGCTGAAATTGAAAGATTGACAAAAGAGGTAAATACCAAAACTTTAATCTCCCTAAATAAGTTGAAAAATTTCCAATCGACATATCCTTCTTAGATCAGAGGCTTAGAGTGTGTGATGGAGAATACTGAATGACTTGCTTTCAGCACCACTGAACATTGATTAACCATTTATCTGACATTGCCACATTCACAAATGGGTTTATTCTCTTTTTCTTGTCTTTTCCTGTTGTCCCTTTTTTCTGTTTTTGGTTGATGCTGTTGAATAGGAGGGTGTGGAGGTAGAATATTAGAGTAGAAGATTATAGGAGGGCGGGCATATTTCTATTCCATTCTCAAGAGTATTAATATTCTTCTTCTTCTTTTTTTTCTTATCTAGATTTCTATTACTACTTGTGATTCTTTAGCGTCAATATCCTATTTTCTTACTGTTGTTTCTGCTTGTTATTTCTGCTTCTTTTTCATGTCTATCGGAAACACCTGTTTTTTACCTTCTCAAGGTATAGAGGTAAGGTCTGCGTACGCTCTACCCTCTTCAAACCCCAGCAGTGGAATTACATTGAGTTCGTTCTTGTTGGTTAATGCTGTTGTCTTTCTTTGTTTTGGTTGTATTATTTGCTGTCGTTACTGTTCACTTCTCCTTTTGTTTCTATCTTCACTTCTGTATTTTGTTTCGACACTTGATTTTGATATGCTTTACTTGAGACTAAAGTCTATCGGAAACAACCTCTCTACCTATACAAGGTAGGGGTAAGGCTGCATATACACCACCCTCCCCAGACTCCACTTAGCTGGATATGTTGTTGCTGTTATGCTATAAATCAGCTCTAATTCTATTAATGCCTCGGTCTGACTTTACTTGCAGATAGCTGAAGAGAAACAAAGGGTAGAAAAAGACCCAAAGTCTACCATGCCTGCATCATTTGTCTCCTTCAAATCGCGGTGGGGTGCTGCTGTTTGTGCACAAACACAGCAATCCAGAAATCCAACCTTGTGGTTGACAGAATGGGCTCCAGAGCCACGTGATGTATTTTGGGATAACCTGGCAATCCCCTATGTTTCTTTGACAATTAGGAAGCTCATCATTGCTGTTGCCTTCTTTTTTCTGACATTCTTCTTCATG</genome_strand>
        <mrna_strand>ATGAATCAGTTAGTGAATGTGTGGAGCACTTTTTCCTGGTTAACCATCAAGATCATTATCTCATGCATCAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGTTTATAATGCCAACAAACTAGCAAAATTGGTGAAGGAGAAGAAGAGTAAGCAAAATTGGCTCGACTATTACCAACTTAAGTACTCTAGGGATCAATCAAAACGGCCTACGATGAAG........................................................................................................................................................ACTGGTTTCCTTGGATGCTTTGGAGCAAAAGTCGACGCAATTGAGCATCACATTGCTGAAATTGAGAGATTGACAAAAGAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAGCTGAAGAGAAACAAAGGGTAGAAAAAGACCCAAAGTCTACCATGCCTGCATCATTTGTCTCCTTCAAATCGCGGTGGGGTGCTGCTGTTTGTGCACAAACACAGCAATCCAGAAATCCAACCTTGTGGTTGACAGAATGGGCTCCAGAGCCACGTGATGTATTTTGGGACAACCTGGCAATCCCCTATGTTTCTTTGACAATTAGGAAGCTCATCATTGCTGTTGCCTTCTTTTTTCTGACATTCTTCTTCATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E453427" ref_strand="+" ref_description="SGN-E453427 [cSTS-19-P10]">
      <seq>ctgccttgatctttcttgtggcatttgcaattttgcggctccaaccattcaatgacagagtttatttccccaaatggtatctcaaggggttgagacacagtcccacccgctctggggcattcgtcgccaaatttgttaatgttgattggagggcatatataaggtttctgaactggataccagatgcactgaaaatgcctgaacctgagcttattgaccatgcagggttggactctgctgtttatttgcgcatatacttgctagggctaaaaatctttgttcctataacgttgcttgcatgggctatcctggtacctgtaaattggacaaatagcactctgacaaaatccgactttacttatagtaacattgataagctttccatttcaaatgttccgcttggatcactcaggttttggactcatattgtaatggcttatgccttctcattctggacctgctatgtcttaaaaactgagtatgcaaaagttgcagccatgaggttgcagtttgtcgcctctgaaaaacgtcgccccgaccaatatacagtccttgttaggaatgttccgcctgatgctgatgaatcagttagtgaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="-" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="92919" stop="89023"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="92619" g_stop="92355" g_length="265"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="265" r_length="265" r_score="0.981"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="92354" i_stop="91468" i_length="887">
            <donor d_prob="0.947" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="91467" g_stop="91321" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="266" r_stop="412" r_length="147" r_score="0.980"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="91320" i_stop="90801" i_length="520">
            <donor d_prob="0.972" d_score="0.96"/>
            <acceptor a_prob="0.987" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="90800" g_stop="90665" g_length="136"/>
          <reference_exon_boundary r_type="cDNA" r_start="413" r_stop="548" r_length="136" r_score="0.985"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="90664" i_stop="89372" i_length="1293">
            <donor d_prob="0.997" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="89371" g_stop="89323" g_length="49"/>
          <reference_exon_boundary r_type="cDNA" r_start="549" r_stop="597" r_length="49" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="-" ref_id="SGN-E453427" ref_strand="+">
        <total_alignment_score>0.982</total_alignment_score>
        <cumulative_length_of_scored_exons>597</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E453427" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="92619" e_stop="92355"/>
          <exon e_start="91467" e_stop="91321"/>
          <exon e_start="90800" e_stop="90665"/>
          <exon e_start="89371" e_stop="89323"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGCCTTGATCTTTCTTGTGGCATTTGCAATTTTGCGGCTCCAACCATTCAATGACAGAGTTTATTTCCCCAAATGGTATCTTAAGGGGCTGAGACACAGTCCCACCCACTCTGGGGCATTCGTCGCCAAATTTGTTAATGTTGATTGGAGAGCATATATAAGGTTTCTGAACTGGATACCAGATGCTCTGAAAATGCCTGAACCTGAGCTTATTGACCATGCAGGGTTGGACTCTGCTGTTTATTTGCGCATATACTTGCTAGGGTATGCTTTCTAATTATTGATATCACTTTTGGAGTGATAAGGCATATTTCTGCGATTGTTAATTGTAACCATGTTTTTAATACCATACTATTTTTCTTTGGTAAACCATGTTGATTAACATGTCGAAAATATCGTATAATTACCTTTTTTATTTTGCTTTGTCAAGTTAACTGGATTCATTTCGGATAAGAATGATTACACTGTGCATTCAATATGAAAATATCACAATAGACCCTATAAAATGAGCTGATATTTGAAAGATTCCTCATTATTTATCTTTTTATTTTTAAGTGAATGTGACTGTAAACTCAAAAAAAAACAATGAAGGTAACTGACTATATTTCTATTGGGGATCTTTGAGGTCTCATTTGATTGTATCAATAATAGGGGTTGACTTCAAACAGTGACGATAAAATGGAAAACCAAATATCTGCTGTCATAACCAGACCAGGGGACTGCTTTCAGCATGGAGTGTAGAACTTGAAACATCAATACTTTAGCTTGTTGCATCAATCTCTTGATTCACATGAAAATCCGAAAAAACCAAACATACTGGATTATCTTATCTTCTTTGTTGGCTGTTTGCGTATACTGTAAAATCAAGATAAATAGGTGGTCATGTTTTTCAAATAGTTTCTTTTTCGACTTCTTATAAGAATGGATGAGGATGATCCTTATAATAGGGGATTTAGGTGTCTTAACATTCAATTAGTCATCTATCTAATCGAGGTTCAGAAACAGGAAAAAGAATCAGCACGATAGGAATTTCAATGTTGTATACTTTAAAAGCTCCTTTATTCCTACTAAAGCATATTGCCTTCGTTGCGTTCATTCTATTTAGAGAAACTAGGTGGTCTGTGATGATTACTGCTTCTTGATTTCTGCAGGCTAAAAATCTTTGTTCCCATAACGTTGCTTGCATGGGCTATCCTGGTACCTGTAAATTGGACAAATAGCACTCTGACAAAATCCGACTTTACTTATAGTGACATTGATAAGCTTTCCATTTCAAATGTTCCGCTTGGATCTCTCAGGTTTGGAGATTTATCTTTCAAAATTTTGAAGAATTTGATCCAGTAGATTTGCCATTACGAGATTGTTTTTTCAACATTTAAGTCTTCTTTGATGTAGGTCTTACGCCTTGAAAACTTTTGAGGTCTTCCTCTTGTTTACTTGTTTATTAATTGTTTTTAGTTTTATCATGATGCTATTTGTAGCCTGCTTTGCTTTTGCATGATCTTGACTAGATCTCTTCTTGGGCCATGAATGAAAATTCTGCAGCTAATGCTTCAAATTTTTTCAAATTTCTTGGCGAGACCACCTAGTAACTTGCAAACAAGATTTGTCTTGGACATGTTTTGAGGATCAGTCATTGAGTGGATTTGCAGTCCGTATTTAGAGTCCCAGTTCTGAGATATGTTAACCCATTTTAGATTCCAGCTTGAAAGTCCATATTTAGCATTCAAGTGAAGTTATCTACTAGGAAAATGGCAATACCCCTTTGCTTACCTTAAAACTCCATATTGTAATTCGTATTGACCTGGATTTTTGCAGGTTTTGGACTCATATTGTTATGGCTTATGCCTTCTCATTCTGGACCTGCTATGTCTTAAAAACTGAGTATGCAAAAGTTGCAGCCATGAGGTTGCAGTTTGTCGCCTCTGAAAAACGTCGTCCCGACCAATATACAGTACGTATCAACTTACTTTTTGAAATTGAACATCTAAATTCTTCTGTGTTTTAACAAATTTAGTTTCTGGAAAATGTATTTAATCACTGAAGCATTTGTTCTCTGCAAATGCATTATGTTTTTCCAAAGTTGATAGACAGATATTGAAGCTGACAAGGCATATCTCCTTAACTGTTCAAACTTAAGAGAGTAGTAAAGTTCCTAAGTTTCTGCTTTCTTGTTTGTGTTTGAAATTTGCAATCTTAATTTTCTCATGGTTTGCGTGATTTGGTGGCTAATCTATGGATAAATTATCTGATGAATTTCTGGAAGGCAGTGAACAGATGACAACTTCATCTTTTACCTTGTCTTTCCATAGGTGGACTGAAACATTGGTTCCTCTTGAAATCCTTTGCAATAATTCTTTATGCATTTGATTAGTTTGAAGCAATAAATTAGTCTGTAATTTCTCCAATTAAGTGGTCAATATATTTAGAACTACTTTGCCCATTTTTTATTTTTTTTTTGTGCGTGTGAGAGATTGTGATAGCCATAAACAGAATTAGAACTGAAAATTTTAATTTCTTTTTACCTCTTTCTTCCATTTAACATACCCTCAAGCTGCATGTCTGTGTAAACTTCAATTTATCTAATGTGTGGACAGAGCTTCTGAGCTTTTTGAAAGCAGTTTTCAGAAGACAAAACATTACTTTTACCTCCTTGAATTATGAGGTGGAGTTAAACATGTTGGCGCTTTTTTTACAATTTCATTGATAACAATTACTTTTTTATGTATATTAGCCATTTGATTTAACAGTAGGAAGAAAACTTAATAGCAGAGGGTCATAACTTCCATTGCCCACCTTGATGGTGTTAATTATGGCTCTGTGGTGCATTTTTGTTCATATCTTAGTCAATTCCTTATTTTAGAGAGTAGATGACATCAGGGTAATTTGTTAGGAGGGAGTGTAGAGCAAGTGTATTTTAATGGGGTTTTCACTGAGTCTTAGATTGCATATACAAAATATGTATTTACATTGATTTTACTAGTGTAATTTTGTTTTTCTGGAGAGAGCTAATCATAGTAGCATTCTTAGGTTTTGACACATTAATGCTCCTTCTGAGAACTTAATTTGAGGAACAATATTTACAAGTATCTAGATTTTTGTTTTGAATAAACAATAGACTAGTTTACGTAGAATAAATATACCTCATTTCCTATTGCCATCTGGATTTTTTATGCCTACTATCTTGAACAATGTGACTGCAATTTTTATCTACATTTCTTCTTGTGCTAAAATTTGATTATTACAGGTCCTTGTTAGGAATGTTCCGCCAGATGCTGATGAATCAGTTAGTGAAT</genome_strand>
        <mrna_strand>CTGCCTTGATCTTTCTTGTGGCATTTGCAATTTTGCGGCTCCAACCATTCAATGACAGAGTTTATTTCCCCAAATGGTATCTCAAGGGGTTGAGACACAGTCCCACCCGCTCTGGGGCATTCGTCGCCAAATTTGTTAATGTTGATTGGAGGGCATATATAAGGTTTCTGAACTGGATACCAGATGCACTGAAAATGCCTGAACCTGAGCTTATTGACCATGCAGGGTTGGACTCTGCTGTTTATTTGCGCATATACTTGCTAGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTAAAAATCTTTGTTCCTATAACGTTGCTTGCATGGGCTATCCTGGTACCTGTAAATTGGACAAATAGCACTCTGACAAAATCCGACTTTACTTATAGTAACATTGATAAGCTTTCCATTTCAAATGTTCCGCTTGGATCACTCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTTGGACTCATATTGTAATGGCTTATGCCTTCTCATTCTGGACCTGCTATGTCTTAAAAACTGAGTATGCAAAAGTTGCAGCCATGAGGTTGCAGTTTGTCGCCTCTGAAAAACGTCGCCCCGACCAATATACA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCTTGTTAGGAATGTTCCGCCTGATGCTGATGAATCAGTTAGTGAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E738108" ref_strand="+" ref_description="SGN-E738108 [LC12BF06]">
      <seq>ctttcttttcttgaattattttcctattatggtgaatacattttcttctcaatattatccaaaataactacattacgttattgtgacttggtggggttttggtttattaggggttggagtttagttaaagtagaagaaaggggaaaaagtgacaactgttggcttttatggagctttgaagttattgtacttctccgatcggctattgctactctgctgctctgttatactcagcagctctgtaattggaaagagatttataatcacaactcacaatagtactagatggcgacacttggagatataggccttgcagcagcaataaatattatatctgccttgatctttcttgtggcatttgcaattttgcggctccaaccattcaatgacagagtttatttccccaaatggtatcttaaggggctgagacacagtcccacccactctggggcattcgtcgccaaatttgttaatgttgattggagagcatatataaggtttctgaactggataccagatgctctgaaaatgcctgaacctgagcttattgaccatgcagggttggactctgctgtttatttgcgcatatacttgctagggctaaaaatctttgttcccataacgttgcttgcatgggctatcctggtacctgtaaattggacaaatagcactctgacaaaatccgactttacttatagtgacattgataagctttccatttcaaatgttccgcttggatctctcaagttttggactcatattgttatggcttatgccttctcattctggacctgctatgtcttaaaaactgagtatgcaaaagttgcagccatgaggttgcagttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="-" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="94071" stop="90401"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="93771" g_stop="93494" g_length="278"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="278" r_length="278" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="93493" i_stop="92676" i_length="818">
            <donor d_prob="0.919" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="92675" g_stop="92355" g_length="321"/>
          <reference_exon_boundary r_type="cDNA" r_start="279" r_stop="599" r_length="321" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="92354" i_stop="91468" i_length="887">
            <donor d_prob="0.947" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="91467" g_stop="91321" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="600" r_stop="746" r_length="147" r_score="0.993"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="91320" i_stop="90801" i_length="520">
            <donor d_prob="0.972" d_score="0.98"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="90800" g_stop="90701" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="747" r_stop="846" r_length="100" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="-" ref_id="SGN-E738108" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>846</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E738108" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="93771" e_stop="93494"/>
          <exon e_start="92675" e_stop="92355"/>
          <exon e_start="91467" e_stop="91321"/>
          <exon e_start="90800" e_stop="90701"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTCTTTTCTTGAATTATTTTCCTATTATGGTGAATACATTTTCTTCTCAATATTATCCAAAATAACTACATTACGTTATTGTGACTTGGTGGGGTTTTGGTTTATTAGGGGTTGGAGTTTAGTTAAAGTAGAAGAAAGGGGAAAAAGTGACAACTGTTGGCTTTTATGGAGCTTTGAAGTTATTGTACTTCTCCGATCGGCTATTGCTACTCTGCTGCTCTGTTATACTCAGCAGCTCTGTAATTGGAAAGAGATTTATAATCACAACTCACAATAGTATGATCTTCTTTCTGCAACTGTTTTTTTTTTTAAAAAAAAGTTTTTTTTGTGTTTGAAAAGGGTTTTTGTTGATGAATTGCGGTTTTACTTTTGCTTGATTTCAGTGTCTGAATGTGTGTAAGATTTCATGTGTTTCCTAATCTCTGATTTGATTCTGCTAGTTAAGGACTTTTTTTTTTTGCCGTTTTAGGTTGCTGATTCGATTGATTTTCTACTTTTCTAATTTGTGTATTTCGAATTTCCATTTTCCCCAGATTCTCTGAGTTAAAAGAAATAGAGATGATCAGTTGTATTTTTGCGTATTTGTTTTTATCAATTAGGAGTATATGGTAATTTTGATAAGTCAAAGTAATCCAACTGAAACTTGCTTTAAAACAGTAAGCTGGTAAGAAGCAGCTGAATGTAGAAATATAAGTTCATATTATAACAAAAGTGGAAAGGAAGTATTTATCTTTGTCAATAGATGTTGATACTATAAATTGTGTTTGGCAAGGGTTTATAGAAATAGAAGTTCATATTATAACAAAAGTGGAAAGGAAGTATTTATCTTTGTCCATAGATGTTGATACTATAAATTATGTTTGGCAAAGGTTTATAGAAATAGAAGTTTATATTATAACAAAAGTGGAAAGGAAGCATCAGCGATTGTGTTTCATAGTGTGAGTGTTTCCCCATTTGAGAGGTTAAAACTTGCAGCATCTGTCTCGTGGTTTAATTAACCTTCGGAAGGGAGGAGTTGATGGAAGATCCGGAAGTGTATGTTTTCCTTGTCGTTTACTTGTTATCTAAGCAGGACATTGACCTTGTCTTTACAGGTACTAGATGGCGACACTTGGAGATATAGGCCTTGCAGCAGCAATAAATATTATATCTGCCTTGATCTTTCTTGTGGCATTTGCAATTTTGCGGCTCCAACCATTCAATGACAGAGTTTATTTCCCCAAATGGTATCTTAAGGGGCTGAGACACAGTCCCACCCACTCTGGGGCATTCGTCGCCAAATTTGTTAATGTTGATTGGAGAGCATATATAAGGTTTCTGAACTGGATACCAGATGCTCTGAAAATGCCTGAACCTGAGCTTATTGACCATGCAGGGTTGGACTCTGCTGTTTATTTGCGCATATACTTGCTAGGGTATGCTTTCTAATTATTGATATCACTTTTGGAGTGATAAGGCATATTTCTGCGATTGTTAATTGTAACCATGTTTTTAATACCATACTATTTTTCTTTGGTAAACCATGTTGATTAACATGTCGAAAATATCGTATAATTACCTTTTTTATTTTGCTTTGTCAAGTTAACTGGATTCATTTCGGATAAGAATGATTACACTGTGCATTCAATATGAAAATATCACAATAGACCCTATAAAATGAGCTGATATTTGAAAGATTCCTCATTATTTATCTTTTTATTTTTAAGTGAATGTGACTGTAAACTCAAAAAAAAACAATGAAGGTAACTGACTATATTTCTATTGGGGATCTTTGAGGTCTCATTTGATTGTATCAATAATAGGGGTTGACTTCAAACAGTGACGATAAAATGGAAAACCAAATATCTGCTGTCATAACCAGACCAGGGGACTGCTTTCAGCATGGAGTGTAGAACTTGAAACATCAATACTTTAGCTTGTTGCATCAATCTCTTGATTCACATGAAAATCCGAAAAAACCAAACATACTGGATTATCTTATCTTCTTTGTTGGCTGTTTGCGTATACTGTAAAATCAAGATAAATAGGTGGTCATGTTTTTCAAATAGTTTCTTTTTCGACTTCTTATAAGAATGGATGAGGATGATCCTTATAATAGGGGATTTAGGTGTCTTAACATTCAATTAGTCATCTATCTAATCGAGGTTCAGAAACAGGAAAAAGAATCAGCACGATAGGAATTTCAATGTTGTATACTTTAAAAGCTCCTTTATTCCTACTAAAGCATATTGCCTTCGTTGCGTTCATTCTATTTAGAGAAACTAGGTGGTCTGTGATGATTACTGCTTCTTGATTTCTGCAGGCTAAAAATCTTTGTTCCCATAACGTTGCTTGCATGGGCTATCCTGGTACCTGTAAATTGGACAAATAGCACTCTGACAAAATCCGACTTTACTTATAGTGACATTGATAAGCTTTCCATTTCAAATGTTCCGCTTGGATCTCTCAGGTTTGGAGATTTATCTTTCAAAATTTTGAAGAATTTGATCCAGTAGATTTGCCATTACGAGATTGTTTTTTCAACATTTAAGTCTTCTTTGATGTAGGTCTTACGCCTTGAAAACTTTTGAGGTCTTCCTCTTGTTTACTTGTTTATTAATTGTTTTTAGTTTTATCATGATGCTATTTGTAGCCTGCTTTGCTTTTGCATGATCTTGACTAGATCTCTTCTTGGGCCATGAATGAAAATTCTGCAGCTAATGCTTCAAATTTTTTCAAATTTCTTGGCGAGACCACCTAGTAACTTGCAAACAAGATTTGTCTTGGACATGTTTTGAGGATCAGTCATTGAGTGGATTTGCAGTCCGTATTTAGAGTCCCAGTTCTGAGATATGTTAACCCATTTTAGATTCCAGCTTGAAAGTCCATATTTAGCATTCAAGTGAAGTTATCTACTAGGAAAATGGCAATACCCCTTTGCTTACCTTAAAACTCCATATTGTAATTCGTATTGACCTGGATTTTTGCAGGTTTTGGACTCATATTGTTATGGCTTATGCCTTCTCATTCTGGACCTGCTATGTCTTAAAAACTGAGTATGCAAAAGTTGCAGCCATGAGGTTGCAGTTT</genome_strand>
        <mrna_strand>CTTTCTTTTCTTGAATTATTTTCCTATTATGGTGAATACATTTTCTTCTCAATATTATCCAAAATAACTACATTACGTTATTGTGACTTGGTGGGGTTTTGGTTTATTAGGGGTTGGAGTTTAGTTAAAGTAGAAGAAAGGGGAAAAAGTGACAACTGTTGGCTTTTATGGAGCTTTGAAGTTATTGTACTTCTCCGATCGGCTATTGCTACTCTGCTGCTCTGTTATACTCAGCAGCTCTGTAATTGGAAAGAGATTTATAATCACAACTCACAATA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACTAGATGGCGACACTTGGAGATATAGGCCTTGCAGCAGCAATAAATATTATATCTGCCTTGATCTTTCTTGTGGCATTTGCAATTTTGCGGCTCCAACCATTCAATGACAGAGTTTATTTCCCCAAATGGTATCTTAAGGGGCTGAGACACAGTCCCACCCACTCTGGGGCATTCGTCGCCAAATTTGTTAATGTTGATTGGAGAGCATATATAAGGTTTCTGAACTGGATACCAGATGCTCTGAAAATGCCTGAACCTGAGCTTATTGACCATGCAGGGTTGGACTCTGCTGTTTATTTGCGCATATACTTGCTAGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTAAAAATCTTTGTTCCCATAACGTTGCTTGCATGGGCTATCCTGGTACCTGTAAATTGGACAAATAGCACTCTGACAAAATCCGACTTTACTTATAGTGACATTGATAAGCTTTCCATTTCAAATGTTCCGCTTGGATCTCTCAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTTGGACTCATATTGTTATGGCTTATGCCTTCTCATTCTGGACCTGCTATGTCTTAAAAACTGAGTATGCAAAAGTTGCAGCCATGAGGTTGCAGTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E299866" ref_strand="+" ref_description="SGN-E299866 [cLEW-1-I24]">
      <seq>tggagctttgaagttattgtacttctccgatcggctattgctactctgctgctctgttatactcagcagctctgtaattggaaagagatttataatcacaactcacaatagtactagatggcgacacttggagatataggccttgcagcagcaataaatattatatctgccttgatctttcttgtggcatttgcaattttgcggctccaaccattcaatgacagagtttatttccccaaatggtatcttaaggggctgagacacagtcccacccactctggggcattcgtcgccaaatttgttaatgttgattggagagcatatataaggtttctgaactggataccagatgctctgaaaatgcctgaacctgagcttattgaccatgcagggttggactctgctgtttatttgcgcatatacttgctagggctaaaaatctttgttcccataacgttgcttgcatgggctatcctggtacctgtaaattggacaaatagcactctgacaaaatccgactttacttatagtgacattgataagctttccatttcaaatgttccgcttggatctctcaggttttggactcatattgttatggcttatgccttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="-" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="93903" stop="90467"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="93603" g_stop="93494" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="110" r_length="110" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="93493" i_stop="92676" i_length="818">
            <donor d_prob="0.919" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="92675" g_stop="92355" g_length="321"/>
          <reference_exon_boundary r_type="cDNA" r_start="111" r_stop="431" r_length="321" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="92354" i_stop="91468" i_length="887">
            <donor d_prob="0.947" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="91467" g_stop="91321" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="432" r_stop="578" r_length="147" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="91320" i_stop="90801" i_length="520">
            <donor d_prob="0.972" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="90800" g_stop="90767" g_length="34"/>
          <reference_exon_boundary r_type="cDNA" r_start="579" r_stop="612" r_length="34" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="-" ref_id="SGN-E299866" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>612</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E299866" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="93603" e_stop="93494"/>
          <exon e_start="92675" e_stop="92355"/>
          <exon e_start="91467" e_stop="91321"/>
          <exon e_start="90800" e_stop="90767"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGAGCTTTGAAGTTATTGTACTTCTCCGATCGGCTATTGCTACTCTGCTGCTCTGTTATACTCAGCAGCTCTGTAATTGGAAAGAGATTTATAATCACAACTCACAATAGTATGATCTTCTTTCTGCAACTGTTTTTTTTTTTAAAAAAAAGTTTTTTTTGTGTTTGAAAAGGGTTTTTGTTGATGAATTGCGGTTTTACTTTTGCTTGATTTCAGTGTCTGAATGTGTGTAAGATTTCATGTGTTTCCTAATCTCTGATTTGATTCTGCTAGTTAAGGACTTTTTTTTTTTGCCGTTTTAGGTTGCTGATTCGATTGATTTTCTACTTTTCTAATTTGTGTATTTCGAATTTCCATTTTCCCCAGATTCTCTGAGTTAAAAGAAATAGAGATGATCAGTTGTATTTTTGCGTATTTGTTTTTATCAATTAGGAGTATATGGTAATTTTGATAAGTCAAAGTAATCCAACTGAAACTTGCTTTAAAACAGTAAGCTGGTAAGAAGCAGCTGAATGTAGAAATATAAGTTCATATTATAACAAAAGTGGAAAGGAAGTATTTATCTTTGTCAATAGATGTTGATACTATAAATTGTGTTTGGCAAGGGTTTATAGAAATAGAAGTTCATATTATAACAAAAGTGGAAAGGAAGTATTTATCTTTGTCCATAGATGTTGATACTATAAATTATGTTTGGCAAAGGTTTATAGAAATAGAAGTTTATATTATAACAAAAGTGGAAAGGAAGCATCAGCGATTGTGTTTCATAGTGTGAGTGTTTCCCCATTTGAGAGGTTAAAACTTGCAGCATCTGTCTCGTGGTTTAATTAACCTTCGGAAGGGAGGAGTTGATGGAAGATCCGGAAGTGTATGTTTTCCTTGTCGTTTACTTGTTATCTAAGCAGGACATTGACCTTGTCTTTACAGGTACTAGATGGCGACACTTGGAGATATAGGCCTTGCAGCAGCAATAAATATTATATCTGCCTTGATCTTTCTTGTGGCATTTGCAATTTTGCGGCTCCAACCATTCAATGACAGAGTTTATTTCCCCAAATGGTATCTTAAGGGGCTGAGACACAGTCCCACCCACTCTGGGGCATTCGTCGCCAAATTTGTTAATGTTGATTGGAGAGCATATATAAGGTTTCTGAACTGGATACCAGATGCTCTGAAAATGCCTGAACCTGAGCTTATTGACCATGCAGGGTTGGACTCTGCTGTTTATTTGCGCATATACTTGCTAGGGTATGCTTTCTAATTATTGATATCACTTTTGGAGTGATAAGGCATATTTCTGCGATTGTTAATTGTAACCATGTTTTTAATACCATACTATTTTTCTTTGGTAAACCATGTTGATTAACATGTCGAAAATATCGTATAATTACCTTTTTTATTTTGCTTTGTCAAGTTAACTGGATTCATTTCGGATAAGAATGATTACACTGTGCATTCAATATGAAAATATCACAATAGACCCTATAAAATGAGCTGATATTTGAAAGATTCCTCATTATTTATCTTTTTATTTTTAAGTGAATGTGACTGTAAACTCAAAAAAAAACAATGAAGGTAACTGACTATATTTCTATTGGGGATCTTTGAGGTCTCATTTGATTGTATCAATAATAGGGGTTGACTTCAAACAGTGACGATAAAATGGAAAACCAAATATCTGCTGTCATAACCAGACCAGGGGACTGCTTTCAGCATGGAGTGTAGAACTTGAAACATCAATACTTTAGCTTGTTGCATCAATCTCTTGATTCACATGAAAATCCGAAAAAACCAAACATACTGGATTATCTTATCTTCTTTGTTGGCTGTTTGCGTATACTGTAAAATCAAGATAAATAGGTGGTCATGTTTTTCAAATAGTTTCTTTTTCGACTTCTTATAAGAATGGATGAGGATGATCCTTATAATAGGGGATTTAGGTGTCTTAACATTCAATTAGTCATCTATCTAATCGAGGTTCAGAAACAGGAAAAAGAATCAGCACGATAGGAATTTCAATGTTGTATACTTTAAAAGCTCCTTTATTCCTACTAAAGCATATTGCCTTCGTTGCGTTCATTCTATTTAGAGAAACTAGGTGGTCTGTGATGATTACTGCTTCTTGATTTCTGCAGGCTAAAAATCTTTGTTCCCATAACGTTGCTTGCATGGGCTATCCTGGTACCTGTAAATTGGACAAATAGCACTCTGACAAAATCCGACTTTACTTATAGTGACATTGATAAGCTTTCCATTTCAAATGTTCCGCTTGGATCTCTCAGGTTTGGAGATTTATCTTTCAAAATTTTGAAGAATTTGATCCAGTAGATTTGCCATTACGAGATTGTTTTTTCAACATTTAAGTCTTCTTTGATGTAGGTCTTACGCCTTGAAAACTTTTGAGGTCTTCCTCTTGTTTACTTGTTTATTAATTGTTTTTAGTTTTATCATGATGCTATTTGTAGCCTGCTTTGCTTTTGCATGATCTTGACTAGATCTCTTCTTGGGCCATGAATGAAAATTCTGCAGCTAATGCTTCAAATTTTTTCAAATTTCTTGGCGAGACCACCTAGTAACTTGCAAACAAGATTTGTCTTGGACATGTTTTGAGGATCAGTCATTGAGTGGATTTGCAGTCCGTATTTAGAGTCCCAGTTCTGAGATATGTTAACCCATTTTAGATTCCAGCTTGAAAGTCCATATTTAGCATTCAAGTGAAGTTATCTACTAGGAAAATGGCAATACCCCTTTGCTTACCTTAAAACTCCATATTGTAATTCGTATTGACCTGGATTTTTGCAGGTTTTGGACTCATATTGTTATGGCTTATGCCTTC</genome_strand>
        <mrna_strand>TGGAGCTTTGAAGTTATTGTACTTCTCCGATCGGCTATTGCTACTCTGCTGCTCTGTTATACTCAGCAGCTCTGTAATTGGAAAGAGATTTATAATCACAACTCACAATA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACTAGATGGCGACACTTGGAGATATAGGCCTTGCAGCAGCAATAAATATTATATCTGCCTTGATCTTTCTTGTGGCATTTGCAATTTTGCGGCTCCAACCATTCAATGACAGAGTTTATTTCCCCAAATGGTATCTTAAGGGGCTGAGACACAGTCCCACCCACTCTGGGGCATTCGTCGCCAAATTTGTTAATGTTGATTGGAGAGCATATATAAGGTTTCTGAACTGGATACCAGATGCTCTGAAAATGCCTGAACCTGAGCTTATTGACCATGCAGGGTTGGACTCTGCTGTTTATTTGCGCATATACTTGCTAGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTAAAAATCTTTGTTCCCATAACGTTGCTTGCATGGGCTATCCTGGTACCTGTAAATTGGACAAATAGCACTCTGACAAAATCCGACTTTACTTATAGTGACATTGATAAGCTTTCCATTTCAAATGTTCCGCTTGGATCTCTCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTTGGACTCATATTGTTATGGCTTATGCCTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E367706" ref_strand="+" ref_description="SGN-E367706 [cLPT-14-C5]">
      <seq>gaaagagatttatagtcacaactcacaatagtactagatggcgacacttggagatataggccttgcagcagcaataaatattatatctgccttgatctttcttgtggcatttgcaattttgcggctccaaccattcaatgacagagtttatttccccaaatggtatcttaaggggctgagacacagtcccacccactctggggcattcgtcaccaaatttgttaatgttgattggagagcatatataaggtttctgaactggataccagatgctctgaaaatgcctgaacctgagcttattgaccatgcagggttggactctgctgtttatttgcgcatatacttgctagggctaaaaatctttgttcccataacgttgcttgcatgggctatcctggtacctgtaaattggacaaatagcactctgacaaaatcagactttacttatagtgacattgataagctttccatttcaaatgttccgcttggatcactcaggttttggactcatattattatggcttatgcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="-" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="93823" stop="90470"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="93523" g_stop="93494" g_length="30"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="30" r_length="30" r_score="0.967"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="93493" i_stop="92676" i_length="818">
            <donor d_prob="0.919" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="92675" g_stop="92355" g_length="321"/>
          <reference_exon_boundary r_type="cDNA" r_start="31" r_stop="351" r_length="321" r_score="0.997"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="92354" i_stop="91468" i_length="887">
            <donor d_prob="0.947" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="91467" g_stop="91321" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="352" r_stop="498" r_length="147" r_score="0.986"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="91320" i_stop="90801" i_length="520">
            <donor d_prob="0.972" d_score="0.98"/>
            <acceptor a_prob="0.987" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="90800" g_stop="90770" g_length="31"/>
          <reference_exon_boundary r_type="cDNA" r_start="499" r_stop="529" r_length="31" r_score="0.968"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="-" ref_id="SGN-E367706" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>529</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E367706" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="93523" e_stop="93494"/>
          <exon e_start="92675" e_stop="92355"/>
          <exon e_start="91467" e_stop="91321"/>
          <exon e_start="90800" e_stop="90770"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAAGAGATTTATAATCACAACTCACAATAGTATGATCTTCTTTCTGCAACTGTTTTTTTTTTTAAAAAAAAGTTTTTTTTGTGTTTGAAAAGGGTTTTTGTTGATGAATTGCGGTTTTACTTTTGCTTGATTTCAGTGTCTGAATGTGTGTAAGATTTCATGTGTTTCCTAATCTCTGATTTGATTCTGCTAGTTAAGGACTTTTTTTTTTTGCCGTTTTAGGTTGCTGATTCGATTGATTTTCTACTTTTCTAATTTGTGTATTTCGAATTTCCATTTTCCCCAGATTCTCTGAGTTAAAAGAAATAGAGATGATCAGTTGTATTTTTGCGTATTTGTTTTTATCAATTAGGAGTATATGGTAATTTTGATAAGTCAAAGTAATCCAACTGAAACTTGCTTTAAAACAGTAAGCTGGTAAGAAGCAGCTGAATGTAGAAATATAAGTTCATATTATAACAAAAGTGGAAAGGAAGTATTTATCTTTGTCAATAGATGTTGATACTATAAATTGTGTTTGGCAAGGGTTTATAGAAATAGAAGTTCATATTATAACAAAAGTGGAAAGGAAGTATTTATCTTTGTCCATAGATGTTGATACTATAAATTATGTTTGGCAAAGGTTTATAGAAATAGAAGTTTATATTATAACAAAAGTGGAAAGGAAGCATCAGCGATTGTGTTTCATAGTGTGAGTGTTTCCCCATTTGAGAGGTTAAAACTTGCAGCATCTGTCTCGTGGTTTAATTAACCTTCGGAAGGGAGGAGTTGATGGAAGATCCGGAAGTGTATGTTTTCCTTGTCGTTTACTTGTTATCTAAGCAGGACATTGACCTTGTCTTTACAGGTACTAGATGGCGACACTTGGAGATATAGGCCTTGCAGCAGCAATAAATATTATATCTGCCTTGATCTTTCTTGTGGCATTTGCAATTTTGCGGCTCCAACCATTCAATGACAGAGTTTATTTCCCCAAATGGTATCTTAAGGGGCTGAGACACAGTCCCACCCACTCTGGGGCATTCGTCGCCAAATTTGTTAATGTTGATTGGAGAGCATATATAAGGTTTCTGAACTGGATACCAGATGCTCTGAAAATGCCTGAACCTGAGCTTATTGACCATGCAGGGTTGGACTCTGCTGTTTATTTGCGCATATACTTGCTAGGGTATGCTTTCTAATTATTGATATCACTTTTGGAGTGATAAGGCATATTTCTGCGATTGTTAATTGTAACCATGTTTTTAATACCATACTATTTTTCTTTGGTAAACCATGTTGATTAACATGTCGAAAATATCGTATAATTACCTTTTTTATTTTGCTTTGTCAAGTTAACTGGATTCATTTCGGATAAGAATGATTACACTGTGCATTCAATATGAAAATATCACAATAGACCCTATAAAATGAGCTGATATTTGAAAGATTCCTCATTATTTATCTTTTTATTTTTAAGTGAATGTGACTGTAAACTCAAAAAAAAACAATGAAGGTAACTGACTATATTTCTATTGGGGATCTTTGAGGTCTCATTTGATTGTATCAATAATAGGGGTTGACTTCAAACAGTGACGATAAAATGGAAAACCAAATATCTGCTGTCATAACCAGACCAGGGGACTGCTTTCAGCATGGAGTGTAGAACTTGAAACATCAATACTTTAGCTTGTTGCATCAATCTCTTGATTCACATGAAAATCCGAAAAAACCAAACATACTGGATTATCTTATCTTCTTTGTTGGCTGTTTGCGTATACTGTAAAATCAAGATAAATAGGTGGTCATGTTTTTCAAATAGTTTCTTTTTCGACTTCTTATAAGAATGGATGAGGATGATCCTTATAATAGGGGATTTAGGTGTCTTAACATTCAATTAGTCATCTATCTAATCGAGGTTCAGAAACAGGAAAAAGAATCAGCACGATAGGAATTTCAATGTTGTATACTTTAAAAGCTCCTTTATTCCTACTAAAGCATATTGCCTTCGTTGCGTTCATTCTATTTAGAGAAACTAGGTGGTCTGTGATGATTACTGCTTCTTGATTTCTGCAGGCTAAAAATCTTTGTTCCCATAACGTTGCTTGCATGGGCTATCCTGGTACCTGTAAATTGGACAAATAGCACTCTGACAAAATCCGACTTTACTTATAGTGACATTGATAAGCTTTCCATTTCAAATGTTCCGCTTGGATCTCTCAGGTTTGGAGATTTATCTTTCAAAATTTTGAAGAATTTGATCCAGTAGATTTGCCATTACGAGATTGTTTTTTCAACATTTAAGTCTTCTTTGATGTAGGTCTTACGCCTTGAAAACTTTTGAGGTCTTCCTCTTGTTTACTTGTTTATTAATTGTTTTTAGTTTTATCATGATGCTATTTGTAGCCTGCTTTGCTTTTGCATGATCTTGACTAGATCTCTTCTTGGGCCATGAATGAAAATTCTGCAGCTAATGCTTCAAATTTTTTCAAATTTCTTGGCGAGACCACCTAGTAACTTGCAAACAAGATTTGTCTTGGACATGTTTTGAGGATCAGTCATTGAGTGGATTTGCAGTCCGTATTTAGAGTCCCAGTTCTGAGATATGTTAACCCATTTTAGATTCCAGCTTGAAAGTCCATATTTAGCATTCAAGTGAAGTTATCTACTAGGAAAATGGCAATACCCCTTTGCTTACCTTAAAACTCCATATTGTAATTCGTATTGACCTGGATTTTTGCAGGTTTTGGACTCATATTGTTATGGCTTATGCC</genome_strand>
        <mrna_strand>GAAAGAGATTTATAGTCACAACTCACAATA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACTAGATGGCGACACTTGGAGATATAGGCCTTGCAGCAGCAATAAATATTATATCTGCCTTGATCTTTCTTGTGGCATTTGCAATTTTGCGGCTCCAACCATTCAATGACAGAGTTTATTTCCCCAAATGGTATCTTAAGGGGCTGAGACACAGTCCCACCCACTCTGGGGCATTCGTCACCAAATTTGTTAATGTTGATTGGAGAGCATATATAAGGTTTCTGAACTGGATACCAGATGCTCTGAAAATGCCTGAACCTGAGCTTATTGACCATGCAGGGTTGGACTCTGCTGTTTATTTGCGCATATACTTGCTAGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTAAAAATCTTTGTTCCCATAACGTTGCTTGCATGGGCTATCCTGGTACCTGTAAATTGGACAAATAGCACTCTGACAAAATCAGACTTTACTTATAGTGACATTGATAAGCTTTCCATTTCAAATGTTCCGCTTGGATCACTCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTTGGACTCATATTATTATGGCTTATGCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E299744" ref_strand="+" ref_description="SGN-E299744 [cLEW-1-H24]">
      <seq>tggagctttgaagttattgtacttctccgatcggctattgctactctgctgctctgttatactcagcagctctgtaattggaaagagatttataatcacaactcacaatagtactagatggcgacacttggagatataggccttgcagcagcaataaatattatatctgccttgatctttcttgtggcatttgcaattttgcggctccaaccattcaatgacagagtttatttccccaaatggtatcttaaggggctgagacacagtcccacccactctggggcattcgtcgccaaatttgttaatgttgattggagagcatatataaggtttctgaactggataccagatgctctgaaaatgcctgaacctgagcttattgaccatgcagggttggactctgctgtttatttgcgcatatacttgctagggctaaaaatctttgttcccataacgttgcttgcatgggctatcctggtacctgtaaattggacaaatagcactctgacaaaatccgactttacttatagtgacattgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="-" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="93903" stop="91059"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="93603" g_stop="93494" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="110" r_length="110" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="93493" i_stop="92676" i_length="818">
            <donor d_prob="0.919" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="92675" g_stop="92355" g_length="321"/>
          <reference_exon_boundary r_type="cDNA" r_start="111" r_stop="431" r_length="321" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="92354" i_stop="91468" i_length="887">
            <donor d_prob="0.947" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="91467" g_stop="91359" g_length="109"/>
          <reference_exon_boundary r_type="cDNA" r_start="432" r_stop="540" r_length="109" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="-" ref_id="SGN-E299744" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>540</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E299744" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="93603" e_stop="93494"/>
          <exon e_start="92675" e_stop="92355"/>
          <exon e_start="91467" e_stop="91359"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGAGCTTTGAAGTTATTGTACTTCTCCGATCGGCTATTGCTACTCTGCTGCTCTGTTATACTCAGCAGCTCTGTAATTGGAAAGAGATTTATAATCACAACTCACAATAGTATGATCTTCTTTCTGCAACTGTTTTTTTTTTTAAAAAAAAGTTTTTTTTGTGTTTGAAAAGGGTTTTTGTTGATGAATTGCGGTTTTACTTTTGCTTGATTTCAGTGTCTGAATGTGTGTAAGATTTCATGTGTTTCCTAATCTCTGATTTGATTCTGCTAGTTAAGGACTTTTTTTTTTTGCCGTTTTAGGTTGCTGATTCGATTGATTTTCTACTTTTCTAATTTGTGTATTTCGAATTTCCATTTTCCCCAGATTCTCTGAGTTAAAAGAAATAGAGATGATCAGTTGTATTTTTGCGTATTTGTTTTTATCAATTAGGAGTATATGGTAATTTTGATAAGTCAAAGTAATCCAACTGAAACTTGCTTTAAAACAGTAAGCTGGTAAGAAGCAGCTGAATGTAGAAATATAAGTTCATATTATAACAAAAGTGGAAAGGAAGTATTTATCTTTGTCAATAGATGTTGATACTATAAATTGTGTTTGGCAAGGGTTTATAGAAATAGAAGTTCATATTATAACAAAAGTGGAAAGGAAGTATTTATCTTTGTCCATAGATGTTGATACTATAAATTATGTTTGGCAAAGGTTTATAGAAATAGAAGTTTATATTATAACAAAAGTGGAAAGGAAGCATCAGCGATTGTGTTTCATAGTGTGAGTGTTTCCCCATTTGAGAGGTTAAAACTTGCAGCATCTGTCTCGTGGTTTAATTAACCTTCGGAAGGGAGGAGTTGATGGAAGATCCGGAAGTGTATGTTTTCCTTGTCGTTTACTTGTTATCTAAGCAGGACATTGACCTTGTCTTTACAGGTACTAGATGGCGACACTTGGAGATATAGGCCTTGCAGCAGCAATAAATATTATATCTGCCTTGATCTTTCTTGTGGCATTTGCAATTTTGCGGCTCCAACCATTCAATGACAGAGTTTATTTCCCCAAATGGTATCTTAAGGGGCTGAGACACAGTCCCACCCACTCTGGGGCATTCGTCGCCAAATTTGTTAATGTTGATTGGAGAGCATATATAAGGTTTCTGAACTGGATACCAGATGCTCTGAAAATGCCTGAACCTGAGCTTATTGACCATGCAGGGTTGGACTCTGCTGTTTATTTGCGCATATACTTGCTAGGGTATGCTTTCTAATTATTGATATCACTTTTGGAGTGATAAGGCATATTTCTGCGATTGTTAATTGTAACCATGTTTTTAATACCATACTATTTTTCTTTGGTAAACCATGTTGATTAACATGTCGAAAATATCGTATAATTACCTTTTTTATTTTGCTTTGTCAAGTTAACTGGATTCATTTCGGATAAGAATGATTACACTGTGCATTCAATATGAAAATATCACAATAGACCCTATAAAATGAGCTGATATTTGAAAGATTCCTCATTATTTATCTTTTTATTTTTAAGTGAATGTGACTGTAAACTCAAAAAAAAACAATGAAGGTAACTGACTATATTTCTATTGGGGATCTTTGAGGTCTCATTTGATTGTATCAATAATAGGGGTTGACTTCAAACAGTGACGATAAAATGGAAAACCAAATATCTGCTGTCATAACCAGACCAGGGGACTGCTTTCAGCATGGAGTGTAGAACTTGAAACATCAATACTTTAGCTTGTTGCATCAATCTCTTGATTCACATGAAAATCCGAAAAAACCAAACATACTGGATTATCTTATCTTCTTTGTTGGCTGTTTGCGTATACTGTAAAATCAAGATAAATAGGTGGTCATGTTTTTCAAATAGTTTCTTTTTCGACTTCTTATAAGAATGGATGAGGATGATCCTTATAATAGGGGATTTAGGTGTCTTAACATTCAATTAGTCATCTATCTAATCGAGGTTCAGAAACAGGAAAAAGAATCAGCACGATAGGAATTTCAATGTTGTATACTTTAAAAGCTCCTTTATTCCTACTAAAGCATATTGCCTTCGTTGCGTTCATTCTATTTAGAGAAACTAGGTGGTCTGTGATGATTACTGCTTCTTGATTTCTGCAGGCTAAAAATCTTTGTTCCCATAACGTTGCTTGCATGGGCTATCCTGGTACCTGTAAATTGGACAAATAGCACTCTGACAAAATCCGACTTTACTTATAGTGACATTGAT</genome_strand>
        <mrna_strand>TGGAGCTTTGAAGTTATTGTACTTCTCCGATCGGCTATTGCTACTCTGCTGCTCTGTTATACTCAGCAGCTCTGTAATTGGAAAGAGATTTATAATCACAACTCACAATA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACTAGATGGCGACACTTGGAGATATAGGCCTTGCAGCAGCAATAAATATTATATCTGCCTTGATCTTTCTTGTGGCATTTGCAATTTTGCGGCTCCAACCATTCAATGACAGAGTTTATTTCCCCAAATGGTATCTTAAGGGGCTGAGACACAGTCCCACCCACTCTGGGGCATTCGTCGCCAAATTTGTTAATGTTGATTGGAGAGCATATATAAGGTTTCTGAACTGGATACCAGATGCTCTGAAAATGCCTGAACCTGAGCTTATTGACCATGCAGGGTTGGACTCTGCTGTTTATTTGCGCATATACTTGCTAGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTAAAAATCTTTGTTCCCATAACGTTGCTTGCATGGGCTATCCTGGTACCTGTAAATTGGACAAATAGCACTCTGACAAAATCCGACTTTACTTATAGTGACATTGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E440242" ref_strand="+" ref_description="SGN-E440242 [cSTA-16-E7]">
      <seq>gttaaagtatgagaaaggggaaaaagtgacaactgttggcttttatggagctttgaagttattgtacttctccgatcggctattgttactctgcttttctgttatactcagcagctctgtaattggaaagtgatatttagtcacaactcacaatagtcctagatggcgacgcttggagatataggccttgcagcagcaataaatattatatctgccttgatctttcttgtggcatttgcaattttgcggctccaaccattcaatgacagagtttatttccccaaatggtatcttaaggggttgagacacagtcccacccgctctggggcattcgtcgccaaatttgttaatgttgattggagggcatatataaagtttctgaactggataccagatgcactgaaaatgcctgaacctgagcttattgaccatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="-" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="93948" stop="92098"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="93648" g_stop="93494" g_length="155"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="155" r_length="155" r_score="0.942"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="93493" i_stop="92676" i_length="818">
            <donor d_prob="0.919" d_score="0.92"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="92675" g_stop="92398" g_length="278"/>
          <reference_exon_boundary r_type="cDNA" r_start="156" r_stop="433" r_length="278" r_score="0.975"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="-" ref_id="SGN-E440242" ref_strand="+">
        <total_alignment_score>0.963</total_alignment_score>
        <cumulative_length_of_scored_exons>433</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E440242" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="93648" e_stop="93494"/>
          <exon e_start="92675" e_stop="92398"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTAAAGTAGAAGAAAGGGGAAAAAGTGACAACTGTTGGCTTTTATGGAGCTTTGAAGTTATTGTACTTCTCCGATCGGCTATTGCTACTCTGCTGCTCTGTTATACTCAGCAGCTCTGTAATTGGAAAGAGATTTATAATCACAACTCACAATAGTATGATCTTCTTTCTGCAACTGTTTTTTTTTTTAAAAAAAAGTTTTTTTTGTGTTTGAAAAGGGTTTTTGTTGATGAATTGCGGTTTTACTTTTGCTTGATTTCAGTGTCTGAATGTGTGTAAGATTTCATGTGTTTCCTAATCTCTGATTTGATTCTGCTAGTTAAGGACTTTTTTTTTTTGCCGTTTTAGGTTGCTGATTCGATTGATTTTCTACTTTTCTAATTTGTGTATTTCGAATTTCCATTTTCCCCAGATTCTCTGAGTTAAAAGAAATAGAGATGATCAGTTGTATTTTTGCGTATTTGTTTTTATCAATTAGGAGTATATGGTAATTTTGATAAGTCAAAGTAATCCAACTGAAACTTGCTTTAAAACAGTAAGCTGGTAAGAAGCAGCTGAATGTAGAAATATAAGTTCATATTATAACAAAAGTGGAAAGGAAGTATTTATCTTTGTCAATAGATGTTGATACTATAAATTGTGTTTGGCAAGGGTTTATAGAAATAGAAGTTCATATTATAACAAAAGTGGAAAGGAAGTATTTATCTTTGTCCATAGATGTTGATACTATAAATTATGTTTGGCAAAGGTTTATAGAAATAGAAGTTTATATTATAACAAAAGTGGAAAGGAAGCATCAGCGATTGTGTTTCATAGTGTGAGTGTTTCCCCATTTGAGAGGTTAAAACTTGCAGCATCTGTCTCGTGGTTTAATTAACCTTCGGAAGGGAGGAGTTGATGGAAGATCCGGAAGTGTATGTTTTCCTTGTCGTTTACTTGTTATCTAAGCAGGACATTGACCTTGTCTTTACAGGTACTAGATGGCGACACTTGGAGATATAGGCCTTGCAGCAGCAATAAATATTATATCTGCCTTGATCTTTCTTGTGGCATTTGCAATTTTGCGGCTCCAACCATTCAATGACAGAGTTTATTTCCCCAAATGGTATCTTAAGGGGCTGAGACACAGTCCCACCCACTCTGGGGCATTCGTCGCCAAATTTGTTAATGTTGATTGGAGAGCATATATAAGGTTTCTGAACTGGATACCAGATGCTCTGAAAATGCCTGAACCTGAGCTTATTGACCATG</genome_strand>
        <mrna_strand>GTTAAAGTATGAGAAAGGGGAAAAAGTGACAACTGTTGGCTTTTATGGAGCTTTGAAGTTATTGTACTTCTCCGATCGGCTATTGTTACTCTGCTTTTCTGTTATACTCAGCAGCTCTGTAATTGGAAAGTGATATTTAGTCACAACTCACAATA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCTAGATGGCGACGCTTGGAGATATAGGCCTTGCAGCAGCAATAAATATTATATCTGCCTTGATCTTTCTTGTGGCATTTGCAATTTTGCGGCTCCAACCATTCAATGACAGAGTTTATTTCCCCAAATGGTATCTTAAGGGGTTGAGACACAGTCCCACCCGCTCTGGGGCATTCGTCGCCAAATTTGTTAATGTTGATTGGAGGGCATATATAAAGTTTCTGAACTGGATACCAGATGCACTGAAAATGCCTGAACCTGAGCTTATTGACCATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E710898" ref_strand="+" ref_description="SGN-E710898 [FA57BB09]">
      <seq>ccctttagttataaaaaaaaaaagaaaaaattaattccattatttaataggagtagggtttattttattttatttattgctctagacaattgaagaagagagatcgattcgtttgtcaaaacaaaacaaaaaaaaaaaacgttaccttcttttcccctaacagtatctgggctgaaaaacccctttgttttcttcttcaatcctatcccaacacagttcagggatttgggggcaaaaaacttcaattttctggcatagttttctttattatccaaaacggggcaaaaaaaatatcttcttgatttgggggggggggttctgtggaaaaaaactaacttgccactttcttttctggaattatttccctattagggggaaaactttttcttcccaatattatccaaaataactactttacgttattgggactggggggggtttgggtttattaggggttggagtttatttaaagtaaaaaaagggggaaaaagggacaactgtgggcttttatggagctttgaagttattgaacttccccgatcggttattgctactcggcggctcggttatactcaccagctctgtatttggaaaaaaatttataatcccacctcccaatagtactaaagggcgacccttggaaatataggccttgcagcagcaataaatattatatcggcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="-" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="94411" stop="92315"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="94113" g_stop="93494" g_length="620"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="620" r_length="620" r_score="0.908"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="93493" i_stop="92676" i_length="818">
            <donor d_prob="0.919" d_score="0.86"/>
            <acceptor a_prob="1.000" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="92675" g_stop="92615" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="621" r_stop="681" r_length="61" r_score="0.918"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="-" ref_id="SGN-E710898" ref_strand="+">
        <total_alignment_score>0.909</total_alignment_score>
        <cumulative_length_of_scored_exons>681</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E710898" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="94113" e_stop="93494"/>
          <exon e_start="92675" e_stop="92615"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACTCTAATTATAAAAAAAAAAAGAAAAAATTAATTCCATTATTTAATAGGAGTAGTGTTTATTTTATTTTATTTATTGCTCTAGACAATTGAAGAAGAGAGATCGATTCGTTTGTCAAAACAAAACAAAAAAAAAAAACGTTACCATCATTTCTCCTAACAGTATCTGTGCTGAAAAACACCTTTGCTTTCATCTTCAATCCTATCCCAACACAGTTCATGGACTTGTGTGCAAAAAACTTCAATTTTCTTGCATAGTTTTCATTATTATCCAAAACAGTGCAAGAAAAATATCTTCTTGATTTGGTGGGTGGTGTTCTGTTGGAAAAAACTAACTTGCCACTTTCTTTTCTTGAATTATTTTCCTATTATGGTGAATACATTTTCTTCTCAATATTATCCAAAATAACTACATTACGTTATTGTGACTTGGTGGGGTTTTGGTTTATTAGGGGTTGGAGTTTAGTTAAAGTAGAAGAAAGGGGAAAAAGTGACAACTGTTGGCTTTTATGGAGCTTTGAAGTTATTGTACTTCTCCGATCGGCTATTGCTACTCTGCTGCTCTGTTATACTCAGCAGCTCTGTAATTGGAAAGAGATTTATAATCACAACTCACAATAGTATGATCTTCTTTCTGCAACTGTTTTTTTTTTTAAAAAAAAGTTTTTTTTGTGTTTGAAAAGGGTTTTTGTTGATGAATTGCGGTTTTACTTTTGCTTGATTTCAGTGTCTGAATGTGTGTAAGATTTCATGTGTTTCCTAATCTCTGATTTGATTCTGCTAGTTAAGGACTTTTTTTTTTTGCCGTTTTAGGTTGCTGATTCGATTGATTTTCTACTTTTCTAATTTGTGTATTTCGAATTTCCATTTTCCCCAGATTCTCTGAGTTAAAAGAAATAGAGATGATCAGTTGTATTTTTGCGTATTTGTTTTTATCAATTAGGAGTATATGGTAATTTTGATAAGTCAAAGTAATCCAACTGAAACTTGCTTTAAAACAGTAAGCTGGTAAGAAGCAGCTGAATGTAGAAATATAAGTTCATATTATAACAAAAGTGGAAAGGAAGTATTTATCTTTGTCAATAGATGTTGATACTATAAATTGTGTTTGGCAAGGGTTTATAGAAATAGAAGTTCATATTATAACAAAAGTGGAAAGGAAGTATTTATCTTTGTCCATAGATGTTGATACTATAAATTATGTTTGGCAAAGGTTTATAGAAATAGAAGTTTATATTATAACAAAAGTGGAAAGGAAGCATCAGCGATTGTGTTTCATAGTGTGAGTGTTTCCCCATTTGAGAGGTTAAAACTTGCAGCATCTGTCTCGTGGTTTAATTAACCTTCGGAAGGGAGGAGTTGATGGAAGATCCGGAAGTGTATGTTTTCCTTGTCGTTTACTTGTTATCTAAGCAGGACATTGACCTTGTCTTTACAGGTACTAGATGGCGACACTTGGAGATATAGGCCTTGCAGCAGCAATAAATATTATATCTGCC</genome_strand>
        <mrna_strand>CCCTTTAGTTATAAAAAAAAAAAGAAAAAATTAATTCCATTATTTAATAGGAGTAGGGTTTATTTTATTTTATTTATTGCTCTAGACAATTGAAGAAGAGAGATCGATTCGTTTGTCAAAACAAAACAAAAAAAAAAAACGTTACCTTCTTTTCCCCTAACAGTATCTGGGCTGAAAAACCCCTTTGTTTTCTTCTTCAATCCTATCCCAACACAGTTCAGGGATTTGGGGGCAAAAAACTTCAATTTTCTGGCATAGTTTTCTTTATTATCCAAAACGGGGCAAAAAAAATATCTTCTTGATTTGGGGGGGGGGGTTCTGTGGAAAAAAACTAACTTGCCACTTTCTTTTCTGGAATTATTTCCCTATTAGGGGGAAAACTTTTTCTTCCCAATATTATCCAAAATAACTACTTTACGTTATTGGGACTGGGGGGGGTTTGGGTTTATTAGGGGTTGGAGTTTATTTAAAGTAAAAAAAGGGGGAAAAAGGGACAACTGTGGGCTTTTATGGAGCTTTGAAGTTATTGAACTTCCCCGATCGGTTATTGCTACTCGGCGGCTCGGTTATACTCACCAGCTCTGTATTTGGAAAAAAATTTATAATCCCACCTCCCAATA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACTAAAGGGCGACCCTTGGAAATATAGGCCTTGCAGCAGCAATAAATATTATATCGGCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E268829" ref_strand="+" ref_description="SGN-E268829 [cLEM-4-D2]">
      <seq>aagagagatcgattcgtttgtcaaaacaaaacaaaaaaaaaaaaacgttaccatcatttctcctaacagtatctgtgctgaaaaacacctttgctttcatcttcaatcctatcccaacacagttcatggacttgtgtgcaaaaaacttcaattttcttgcatagttttcattattatccaaaacagtgcaagaaaaatatcttcttgatttggtgggtggtgttctgttggaaaaaactaacttgccactttcttttcttgaattattttcctattatggtgaatacattttcttctcaatattatccaaaataactacattacgttattgtgacttggtggggttttggtttattaggggttggagtttagttaaagtagaagaaaggggaaaaagtgacaactgttggcttttatggagctttgaagttattgtacttctccgatcggctattgctactctgctgctctgttatactcagcagctctgtaattggaaagagatttataatcacaactcacaatagtatgatcttctttctgcaactgttttttttttaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="-" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="94318" stop="93155"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="94018" g_stop="93456" g_length="563"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="564" r_length="564" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="-" ref_id="SGN-E268829" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>563</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E268829" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="94018" e_stop="93456"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGAGAGATCGATTCGTTTGTCAAAACAAAACAA-AAAAAAAAAACGTTACCATCATTTCTCCTAACAGTATCTGTGCTGAAAAACACCTTTGCTTTCATCTTCAATCCTATCCCAACACAGTTCATGGACTTGTGTGCAAAAAACTTCAATTTTCTTGCATAGTTTTCATTATTATCCAAAACAGTGCAAGAAAAATATCTTCTTGATTTGGTGGGTGGTGTTCTGTTGGAAAAAACTAACTTGCCACTTTCTTTTCTTGAATTATTTTCCTATTATGGTGAATACATTTTCTTCTCAATATTATCCAAAATAACTACATTACGTTATTGTGACTTGGTGGGGTTTTGGTTTATTAGGGGTTGGAGTTTAGTTAAAGTAGAAGAAAGGGGAAAAAGTGACAACTGTTGGCTTTTATGGAGCTTTGAAGTTATTGTACTTCTCCGATCGGCTATTGCTACTCTGCTGCTCTGTTATACTCAGCAGCTCTGTAATTGGAAAGAGATTTATAATCACAACTCACAATAGTATGATCTTCTTTCTGCAACTGTTTTTTTTTTTAAAA</genome_strand>
        <mrna_strand>AAGAGAGATCGATTCGTTTGTCAAAACAAAACAAAAAAAAAAAAACGTTACCATCATTTCTCCTAACAGTATCTGTGCTGAAAAACACCTTTGCTTTCATCTTCAATCCTATCCCAACACAGTTCATGGACTTGTGTGCAAAAAACTTCAATTTTCTTGCATAGTTTTCATTATTATCCAAAACAGTGCAAGAAAAATATCTTCTTGATTTGGTGGGTGGTGTTCTGTTGGAAAAAACTAACTTGCCACTTTCTTTTCTTGAATTATTTTCCTATTATGGTGAATACATTTTCTTCTCAATATTATCCAAAATAACTACATTACGTTATTGTGACTTGGTGGGGTTTTGGTTTATTAGGGGTTGGAGTTTAGTTAAAGTAGAAGAAAGGGGAAAAAGTGACAACTGTTGGCTTTTATGGAGCTTTGAAGTTATTGTACTTCTCCGATCGGCTATTGCTACTCTGCTGCTCTGTTATACTCAGCAGCTCTGTAATTGGAAAGAGATTTATAATCACAACTCACAATAGTATGATCTTCTTTCTGCAACTGTTTTTTTTTTAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E341650" ref_strand="+" ref_description="SGN-E341650 [cTOE-23-N17]">
      <seq>tttctcctaacagtatctgtgctgaaaaacacctttgctttcatcttcaatcctatcccaacacagttcatggacttgtgtgcaaaaaacttcaattttcttgcatagttttcattattatccaaaacagtgcaagaaaaatatcttcttgatttggtgggtggtgttctgttggaaaaaactaacttgccactttcttttcttgaattattttcctattatggtgaatacattttcttctcaatattatccaaaataactacattacgttattgtgacttggtggggttttggtttattaggggttggagtttagttaaagtagaagaaaggggaaaaagtgacaactgttggcttttatggagctttgaagttattgtacttctccgatcggctattgctactctgctgctctgttatactcagcagctctgtaattggaaagagatttataatcacaactcac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="-" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="94263" stop="93198"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="93963" g_stop="93498" g_length="466"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="466" r_length="466" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="-" ref_id="SGN-E341650" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>466</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E341650" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="93963" e_stop="93498"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCTCCTAACAGTATCTGTGCTGAAAAACACCTTTGCTTTCATCTTCAATCCTATCCCAACACAGTTCATGGACTTGTGTGCAAAAAACTTCAATTTTCTTGCATAGTTTTCATTATTATCCAAAACAGTGCAAGAAAAATATCTTCTTGATTTGGTGGGTGGTGTTCTGTTGGAAAAAACTAACTTGCCACTTTCTTTTCTTGAATTATTTTCCTATTATGGTGAATACATTTTCTTCTCAATATTATCCAAAATAACTACATTACGTTATTGTGACTTGGTGGGGTTTTGGTTTATTAGGGGTTGGAGTTTAGTTAAAGTAGAAGAAAGGGGAAAAAGTGACAACTGTTGGCTTTTATGGAGCTTTGAAGTTATTGTACTTCTCCGATCGGCTATTGCTACTCTGCTGCTCTGTTATACTCAGCAGCTCTGTAATTGGAAAGAGATTTATAATCACAACTCAC</genome_strand>
        <mrna_strand>TTTCTCCTAACAGTATCTGTGCTGAAAAACACCTTTGCTTTCATCTTCAATCCTATCCCAACACAGTTCATGGACTTGTGTGCAAAAAACTTCAATTTTCTTGCATAGTTTTCATTATTATCCAAAACAGTGCAAGAAAAATATCTTCTTGATTTGGTGGGTGGTGTTCTGTTGGAAAAAACTAACTTGCCACTTTCTTTTCTTGAATTATTTTCCTATTATGGTGAATACATTTTCTTCTCAATATTATCCAAAATAACTACATTACGTTATTGTGACTTGGTGGGGTTTTGGTTTATTAGGGGTTGGAGTTTAGTTAAAGTAGAAGAAAGGGGAAAAAGTGACAACTGTTGGCTTTTATGGAGCTTTGAAGTTATTGTACTTCTCCGATCGGCTATTGCTACTCTGCTGCTCTGTTATACTCAGCAGCTCTGTAATTGGAAAGAGATTTATAATCACAACTCAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E433609" ref_strand="+" ref_description="SGN-E433609 [STM-58-B12]">
      <seq>taacagaggaaaatcttaacttggaaccttacaaacacagtagtaataagcatgttcctggtcaagcaaattttgagaattcttcagaagggggatctcttaataagggtgcttctccagaggtcccgaggattgctgtggataaatctgtagaattttcctatgatgaacttgctaatgccagtgacaacttcagcacagcctacaagattggccaaggtggttttgcatctgtttactatggagagttaagaggcgagaaagctgctatcaagaagatggatatgcaagcaacaaaagagttccttgctgaattgaaggttttgacacatgttcatcacttgaacttggtacgtttgataggatattgcattgagggatccttgttcttagtatatgaatacattgaaaatgggaacctaagccaacatttgcgcggttttgtcccaggtaaggtaccattgccatggtctaccagggtgaaaattgctctggatgcagctagaggcctagagtacatccacgaacacactgttccggtttacatccatcgcgacattaaaacagccaacattttgatcgacaaaaactttcgtgcaaaggttgctgactttggactcacaaaactgatagaaactgaaggtggttcgatgaacactcgtctcgttggtacttttggttacatggccccagagtatggtcaatttggtgatgtttccccaaaattgatgtatatgcatttgggggtgtgctttatgaattatatctgcta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="-" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="104356" stop="101999"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="104057" g_stop="103998" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="60" r_length="60" r_score="0.950"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="103997" i_stop="103789" i_length="209">
            <donor d_prob="0.830" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="103788" g_stop="103589" g_length="200"/>
          <reference_exon_boundary r_type="cDNA" r_start="61" r_stop="260" r_length="200" r_score="0.945"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="103588" i_stop="103400" i_length="189">
            <donor d_prob="0.889" d_score="0.98"/>
            <acceptor a_prob="0.926" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="103399" g_stop="103310" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="261" r_stop="350" r_length="90" r_score="0.978"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="103309" i_stop="102988" i_length="322">
            <donor d_prob="0.998" d_score="0.96"/>
            <acceptor a_prob="0.997" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="102987" g_stop="102894" g_length="94"/>
          <reference_exon_boundary r_type="cDNA" r_start="351" r_stop="444" r_length="94" r_score="0.947"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="102893" i_stop="102803" i_length="91">
            <donor d_prob="0.892" d_score="0.96"/>
            <acceptor a_prob="0.944" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="102802" g_stop="102645" g_length="158"/>
          <reference_exon_boundary r_type="cDNA" r_start="445" r_stop="602" r_length="158" r_score="0.975"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="102644" i_stop="102562" i_length="83">
            <donor d_prob="0.984" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="102561" g_stop="102470" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="603" r_stop="694" r_length="92" r_score="0.989"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="102469" i_stop="102379" i_length="91">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.988" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="102378" g_stop="102299" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="695" r_stop="772" r_length="78" r_score="0.925"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="-" ref_id="SGN-E433609" ref_strand="+">
        <total_alignment_score>0.959</total_alignment_score>
        <cumulative_length_of_scored_exons>774</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E433609" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="104057" e_stop="103998"/>
          <exon e_start="103788" e_stop="103589"/>
          <exon e_start="103399" e_stop="103310"/>
          <exon e_start="102987" e_stop="102894"/>
          <exon e_start="102802" e_stop="102645"/>
          <exon e_start="102561" e_stop="102470"/>
          <exon e_start="102378" e_stop="102299"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAACGGAGGAAAATCTTAACTTGGAACCTTACAAACACAGTAGTAATAAGCATATTCCTGGTAATTTTATTGTTTTGAATCGACTGATGTATGCTTAATTACCTGTCAAACTCTATGGTGGTAATTCCTGTTTGTTGTTTCTCATTTCTCTAGCCTTAGGCTTCCTGCAATCGGTCCGGGTTAATGATAAAATTATGTCAACTGTTCTGTGGAAGCAATGTTTTGGTTCATCCTTAGAATAAACCTTGTAGTTTCTTTATATGACTCAGGTCATGCAAATTTTGAGAATTCATCAGAAGGGGGATCTCTTAAACAGGGCGCTTCCCCAGAGGTCCCGAGGATTGCTGTGGATAAATCTATAGAATTTTCATATGATGAACTTGCTAAAGCCAGTGACAATTTCAGCACAGCCTACAAGATTGGCCAAGGTGGTTTCGCATCTGTTTACTATGGAGAGTTAAGAGGCGAGGTTCGTCACATTATTCTTGTTAAGATTGAAATGATTAGCAATTATTCGGATACTCAGATTGATCATCGACCTAGTTCTAGCTGTTTTATTATGTCACCATTCACATAATTGTCTTGACTCAGCGTGCATTTCTTTTCTATAGTCAAAATTACTCATGCTGCTAATCTCATTTGTCTCGATAAAATGCAGAAAGCTGCTATCAAGAAGATGGATATGCAAGCAACAAAAGAATTCCTTGCTGAATTGAAGGTTTTGACTCATGTTCATCACTTGAACTTGGTAAGTTCTCATTACTCGTACTGATATACTATCTTTTCTTACTTGAATATAACCTCTCTGGCACCTGCTCTGAGTCTATGGGGGAAAAAATCAACATCATGGAGTCATGATTGGTTGAACTTGCTAACTTTAGCAATCTTTGAACTTATTTGTAATGCAATTCTCAAAAGTGGTCTGAGCCACTTAGCTTGATAATGTGATACTTCTCATAGTGAAAGTAAGGATTGGTGATTTGGTTCTGCCATACTTGAGATTTAGCAGATGATGAATCCATTTACCTCATATGTCATAAAGTATATTTCACGTGTTGAAACCTTTGCAGGTACGTTTGATAGGATACTGCGTTGAAGGATCCTTGTTCTTAGTATACGAATACATTGAAAATGGAAACCTAAGCCAACATTTGCGCGGTTTTGGTTAGTTCAGTTCTACTTATTGCACAAAAACTTCATGTCTAACCAAATTTTTGAATTTCTCACAGTTCCATATCAATTTTGTACTATTCAGTTCCAGGTAAGGTGCCATTGCCATGGTCTACCAGGGTGAAAATTGCTCTGGATGCAGCTAGAGGCCTAGAGTACATCCACGAACACACTGTTCCTGTTTACATCCATCGCGACATTAAAACAGCCAACATTTTGATCGATAAAAACTTTCGTGCAAAGGTATGAGAGTTCCAAAAACCAGAACTATGAAAACAAAAACCATGTGTGCTAATTCATTTGAAGATAATCTTTTTGTCTTGCAGGTTGCTGACTTTGGACTCACAAAACTGATAGAAACTGAAGGTGGTTCGATGAACACTCGTCTTGTTGGTACTTTTGGTTACATGGCCCCAGAGTAAGAATTTATTTCCCTATGGTATTAGTACTTATTCAATATCTCTGAACAAGATCAAATTATCATTTTTCGTACTTGACTTAATGTGCAGGTATGGTCAATTTGGTAATGTTTCACTCAAAATAGATGTATATGCATTTGGGGTTGTGCTTTATGAATTAATATCTGCTA</genome_strand>
        <mrna_strand>TAACAGAGGAAAATCTTAACTTGGAACCTTACAAACACAGTAGTAATAAGCATGTTCCTG.................................................................................................................................................................................................................GTCAAGCAAATTTTGAGAATTCTTCAGAAGGGGGATCTCTTAATAAGGGTGCTTCTCCAGAGGTCCCGAGGATTGCTGTGGATAAATCTGTAGAATTTTCCTATGATGAACTTGCTAATGCCAGTGACAACTTCAGCACAGCCTACAAGATTGGCCAAGGTGGTTTTGCATCTGTTTACTATGGAGAGTTAAGAGGCGAG.............................................................................................................................................................................................AAAGCTGCTATCAAGAAGATGGATATGCAAGCAACAAAAGAGTTCCTTGCTGAATTGAAGGTTTTGACACATGTTCATCACTTGAACTTG..................................................................................................................................................................................................................................................................................................................................GTACGTTTGATAGGATATTGCATTGAGGGATCCTTGTTCTTAGTATATGAATACATTGAAAATGGGAACCTAAGCCAACATTTGCGCGGTTTTG...........................................................................................TCCCAGGTAAGGTACCATTGCCATGGTCTACCAGGGTGAAAATTGCTCTGGATGCAGCTAGAGGCCTAGAGTACATCCACGAACACACTGTTCCGGTTTACATCCATCGCGACATTAAAACAGCCAACATTTTGATCGACAAAAACTTTCGTGCAAAG...................................................................................GTTGCTGACTTTGGACTCACAAAACTGATAGAAACTGAAGGTGGTTCGATGAACACTCGTCTCGTTGGTACTTTTGGTTACATGGCCCCAGA...........................................................................................GTATGGTCAATTTGGTGATGTTTC-CCCAAAATTGATGTATATGCATTTGGGGGTGTGCTTTATGAATT-ATATCTGCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E403764" ref_strand="+" ref_description="SGN-E403764 [PPC-11-L21]">
      <seq>acagaggaaaatcttaacttggaaccttacaaacacagtagtaataagcatgttcctggtcaagcaaattttgagaattcttcagaagggggatctcttaataagggtgcttctccagaggtcccgaggattgctgtggataaatctgtagaattttcctatgatgaacttgctaatgccagtgacaacttcagcacagcctacaagattggccaaggtggttttgcatctgtttactatggagagttaagaggcgagaaagctgctatcaagaagatggatatgcaagcaacaaaagagttccttgctgaattgaaggttttgacacatgttcatcacttgaacttggtacgtttgataggatattgcattgagggatccttgttcttagtatatgaatacattgaaaatgggaacctaagccaacatttgcgcggttttgtcccaggtaaggtaccattgccatggtctaccagggtgaaaattgctctggatgcagctagaggcctagagtacatccacgaacacactgttccggtttacatccatcgcgacattaaaacagccaacattttgatcgacaaaaactttcgtgcaaaggttgctgactttggactcacaaaactgatagaaact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="-" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="104355" stop="102226"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="104055" g_stop="103998" g_length="58"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="58" r_length="58" r_score="0.966"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="103997" i_stop="103789" i_length="209">
            <donor d_prob="0.830" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="103788" g_stop="103589" g_length="200"/>
          <reference_exon_boundary r_type="cDNA" r_start="59" r_stop="258" r_length="200" r_score="0.945"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="103588" i_stop="103400" i_length="189">
            <donor d_prob="0.889" d_score="0.98"/>
            <acceptor a_prob="0.926" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="103399" g_stop="103310" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="259" r_stop="348" r_length="90" r_score="0.978"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="103309" i_stop="102988" i_length="322">
            <donor d_prob="0.998" d_score="0.96"/>
            <acceptor a_prob="0.997" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="102987" g_stop="102894" g_length="94"/>
          <reference_exon_boundary r_type="cDNA" r_start="349" r_stop="442" r_length="94" r_score="0.947"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="102893" i_stop="102803" i_length="91">
            <donor d_prob="0.892" d_score="0.96"/>
            <acceptor a_prob="0.944" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="102802" g_stop="102645" g_length="158"/>
          <reference_exon_boundary r_type="cDNA" r_start="443" r_stop="600" r_length="158" r_score="0.975"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="102644" i_stop="102562" i_length="83">
            <donor d_prob="0.984" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="102561" g_stop="102526" g_length="36"/>
          <reference_exon_boundary r_type="cDNA" r_start="601" r_stop="636" r_length="36" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="-" ref_id="SGN-E403764" ref_strand="+">
        <total_alignment_score>0.960</total_alignment_score>
        <cumulative_length_of_scored_exons>636</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E403764" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="104055" e_stop="103998"/>
          <exon e_start="103788" e_stop="103589"/>
          <exon e_start="103399" e_stop="103310"/>
          <exon e_start="102987" e_stop="102894"/>
          <exon e_start="102802" e_stop="102645"/>
          <exon e_start="102561" e_stop="102526"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACGGAGGAAAATCTTAACTTGGAACCTTACAAACACAGTAGTAATAAGCATATTCCTGGTAATTTTATTGTTTTGAATCGACTGATGTATGCTTAATTACCTGTCAAACTCTATGGTGGTAATTCCTGTTTGTTGTTTCTCATTTCTCTAGCCTTAGGCTTCCTGCAATCGGTCCGGGTTAATGATAAAATTATGTCAACTGTTCTGTGGAAGCAATGTTTTGGTTCATCCTTAGAATAAACCTTGTAGTTTCTTTATATGACTCAGGTCATGCAAATTTTGAGAATTCATCAGAAGGGGGATCTCTTAAACAGGGCGCTTCCCCAGAGGTCCCGAGGATTGCTGTGGATAAATCTATAGAATTTTCATATGATGAACTTGCTAAAGCCAGTGACAATTTCAGCACAGCCTACAAGATTGGCCAAGGTGGTTTCGCATCTGTTTACTATGGAGAGTTAAGAGGCGAGGTTCGTCACATTATTCTTGTTAAGATTGAAATGATTAGCAATTATTCGGATACTCAGATTGATCATCGACCTAGTTCTAGCTGTTTTATTATGTCACCATTCACATAATTGTCTTGACTCAGCGTGCATTTCTTTTCTATAGTCAAAATTACTCATGCTGCTAATCTCATTTGTCTCGATAAAATGCAGAAAGCTGCTATCAAGAAGATGGATATGCAAGCAACAAAAGAATTCCTTGCTGAATTGAAGGTTTTGACTCATGTTCATCACTTGAACTTGGTAAGTTCTCATTACTCGTACTGATATACTATCTTTTCTTACTTGAATATAACCTCTCTGGCACCTGCTCTGAGTCTATGGGGGAAAAAATCAACATCATGGAGTCATGATTGGTTGAACTTGCTAACTTTAGCAATCTTTGAACTTATTTGTAATGCAATTCTCAAAAGTGGTCTGAGCCACTTAGCTTGATAATGTGATACTTCTCATAGTGAAAGTAAGGATTGGTGATTTGGTTCTGCCATACTTGAGATTTAGCAGATGATGAATCCATTTACCTCATATGTCATAAAGTATATTTCACGTGTTGAAACCTTTGCAGGTACGTTTGATAGGATACTGCGTTGAAGGATCCTTGTTCTTAGTATACGAATACATTGAAAATGGAAACCTAAGCCAACATTTGCGCGGTTTTGGTTAGTTCAGTTCTACTTATTGCACAAAAACTTCATGTCTAACCAAATTTTTGAATTTCTCACAGTTCCATATCAATTTTGTACTATTCAGTTCCAGGTAAGGTGCCATTGCCATGGTCTACCAGGGTGAAAATTGCTCTGGATGCAGCTAGAGGCCTAGAGTACATCCACGAACACACTGTTCCTGTTTACATCCATCGCGACATTAAAACAGCCAACATTTTGATCGATAAAAACTTTCGTGCAAAGGTATGAGAGTTCCAAAAACCAGAACTATGAAAACAAAAACCATGTGTGCTAATTCATTTGAAGATAATCTTTTTGTCTTGCAGGTTGCTGACTTTGGACTCACAAAACTGATAGAAACT</genome_strand>
        <mrna_strand>ACAGAGGAAAATCTTAACTTGGAACCTTACAAACACAGTAGTAATAAGCATGTTCCTG.................................................................................................................................................................................................................GTCAAGCAAATTTTGAGAATTCTTCAGAAGGGGGATCTCTTAATAAGGGTGCTTCTCCAGAGGTCCCGAGGATTGCTGTGGATAAATCTGTAGAATTTTCCTATGATGAACTTGCTAATGCCAGTGACAACTTCAGCACAGCCTACAAGATTGGCCAAGGTGGTTTTGCATCTGTTTACTATGGAGAGTTAAGAGGCGAG.............................................................................................................................................................................................AAAGCTGCTATCAAGAAGATGGATATGCAAGCAACAAAAGAGTTCCTTGCTGAATTGAAGGTTTTGACACATGTTCATCACTTGAACTTG..................................................................................................................................................................................................................................................................................................................................GTACGTTTGATAGGATATTGCATTGAGGGATCCTTGTTCTTAGTATATGAATACATTGAAAATGGGAACCTAAGCCAACATTTGCGCGGTTTTG...........................................................................................TCCCAGGTAAGGTACCATTGCCATGGTCTACCAGGGTGAAAATTGCTCTGGATGCAGCTAGAGGCCTAGAGTACATCCACGAACACACTGTTCCGGTTTACATCCATCGCGACATTAAAACAGCCAACATTTTGATCGACAAAAACTTTCGTGCAAAG...................................................................................GTTGCTGACTTTGGACTCACAAAACTGATAGAAACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E337921" ref_strand="+" ref_description="SGN-E337921 [cTOE-14-F18]">
      <seq>ttgtcaagtgtcaactaacacaaccatattttcatccattggcatctttcattcaagattctaaaaagagttcaaaaaatctcaacccatttttcaactagtacatagttgaaaatcagatgattttttttcaagaaaatagaagctttgagttggttttaggccttttagtgttaaacattttgtgggtgggggttaaatcccagtgtagtgatgattgtgatgcattagcttcattttatgtatggaatggtgctaacctcacttttatgtctaatactttttcaacccccatcaagaatatccttagttataatcctcagataaccaatccagatattattcaatcccaaagcagagttaatgttcccttctcatgtagctgtgttgatgggaaattcatgggacatcagtttgatgtgcaggtcaagactaatactacttatccgagaatcactcgtctttattgttcgaaccttacaacagttgaaaagttgcaggagtctaacagttatgatcctaacaatgttcctgtgaattcaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="-" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="105756" stop="104614"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="105456" g_stop="104914" g_length="543"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="543" r_length="543" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="-" ref_id="SGN-E337921" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>543</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E337921" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="105456" e_stop="104914"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGTCAAGTGTCAACTAACACAACCATATTTTCATCCATTGGCATCTTTCATTCAAGATTCTAAAAAGAGTTCAAAAAATCTCAACCCATTTTTCAACTAGTACATAGTTGAAAATCAGATGATTTTTTTTCAAGAAAATAGAAGCTTTGAGTTGGTTTTAGGCCTTTTAGTGTTAAACATTTTGTGGGTGGGGGTTAAATCCCAGTGTAGTGATGATTGTGATGCATTAGCTTCATTTTATGTATGGAATGGTGCTAACCTCACTTTTATGTCTAATACTTTTTCAACCCCCATCAAGAATATCCTTAGTTATAATCCTCAGATAACCAATCCAGATATTATTCAATCCCAAAGCAGAGTTAATGTTCCCTTCTCATGTAGCTGTGTTGATGGGAAATTCATGGGACATCAGTTTGATGTGCAGGTCAAGACTAATACTACTTATCCGAGAATCACTCGTCTTTATTGTTCGAACCTTACAACAGTTGAAAAGTTGCAGGAGTCTAACAGTTATGATCCTAACAATGTTCCTGTGAATTCAA</genome_strand>
        <mrna_strand>TTGTCAAGTGTCAACTAACACAACCATATTTTCATCCATTGGCATCTTTCATTCAAGATTCTAAAAAGAGTTCAAAAAATCTCAACCCATTTTTCAACTAGTACATAGTTGAAAATCAGATGATTTTTTTTCAAGAAAATAGAAGCTTTGAGTTGGTTTTAGGCCTTTTAGTGTTAAACATTTTGTGGGTGGGGGTTAAATCCCAGTGTAGTGATGATTGTGATGCATTAGCTTCATTTTATGTATGGAATGGTGCTAACCTCACTTTTATGTCTAATACTTTTTCAACCCCCATCAAGAATATCCTTAGTTATAATCCTCAGATAACCAATCCAGATATTATTCAATCCCAAAGCAGAGTTAATGTTCCCTTCTCATGTAGCTGTGTTGATGGGAAATTCATGGGACATCAGTTTGATGTGCAGGTCAAGACTAATACTACTTATCCGAGAATCACTCGTCTTTATTGTTCGAACCTTACAACAGTTGAAAAGTTGCAGGAGTCTAACAGTTATGATCCTAACAATGTTCCTGTGAATTCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E380017" ref_strand="+" ref_description="SGN-E380017 [TUS-1-D13](-)">
      <seq>catcaagatttacgtggaaaccccttcgatgtgaagagtaaaaaaccacgggtccaaaagctccactataatcaccaagagttacaatattgttctccaaaattggccacaaaacaaagtgtcaaacaacgagcaacaacaaaataagattgctccaaatctagagaattaaaggagcaaaatcaccaatttcgcagctactgttcacgacagcaaaactgaagctgcagaccaccaaatccaactctgtcagttcctaatcaaagattgagatgaagataatatgctgtccaaaaatcagctcaatcggacaagaaacgaagcgggaatcgcaatttgaagttggttgttatggctggatttttgactgcgaatttctctcttttttctctcttttagctgctgaaaaactctctctgaaaaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="+" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="111142" stop="112162"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="111442" g_stop="111859" g_length="418"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="418" r_length="418" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="+" ref_id="SGN-E380017" ref_strand="+">
        <total_alignment_score>0.981</total_alignment_score>
        <cumulative_length_of_scored_exons>418</cumulative_length_of_scored_exons>
        <coverage percentage="0.984" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E380017" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="111442" e_stop="111859"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACCAAGATTTACGTGGAAAACCCTTCGATGTGAAGAGTAAAAAACCACGGGACCAAAAGCTCCACTATAATCACCAAGAGTTACAATATTGTTCTCCAAAATTGGCCACAAAACAAAGTGCCAAACAACGAGCAACAACAAAATAAGACTGCACCAAATCTAGAGAATTAAAGGAGCAAAATCACCAATTTCGCAGCTACTGTTCACGACAGCAAAACTGAAGTTGCAGACCACCAAATCCAACTCTGTCAGTTCCTAATCAAAGATTGAGATGAAGATAATATGCTGTCCAAAAATCAGCTCAATCGGACAAGAAACGAAGCGGGAATCGCAATTTGAAGTTGGTTGTTATGGCTGGATTTTTGACTGCGAATTTCTCTCTTTTTTCTCTCTTTTGGCTGCTGAAAAACTCTCTCT</genome_strand>
        <mrna_strand>CATCAAGATTTACGTGGAAACCCCTTCGATGTGAAGAGTAAAAAACCACGGGTCCAAAAGCTCCACTATAATCACCAAGAGTTACAATATTGTTCTCCAAAATTGGCCACAAAACAAAGTGTCAAACAACGAGCAACAACAAAATAAGATTGCTCCAAATCTAGAGAATTAAAGGAGCAAAATCACCAATTTCGCAGCTACTGTTCACGACAGCAAAACTGAAGCTGCAGACCACCAAATCCAACTCTGTCAGTTCCTAATCAAAGATTGAGATGAAGATAATATGCTGTCCAAAAATCAGCTCAATCGGACAAGAAACGAAGCGGGAATCGCAATTTGAAGTTGGTTGTTATGGCTGGATTTTTGACTGCGAATTTCTCTCTTTTTTCTCTCTTTTAGCTGCTGAAAAACTCTCTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E540636" ref_strand="+" ref_description="SGN-E540636 [TUS-61-A7](-)">
      <seq>tcgagactagttccttcacagctctccttatccccttcaacacttcaaagagaaaacagaaatcatctattcaagtcatcgaaacagagaacttgtcaatctactcgtttccactgtcacaagatgtatgtccctggatttgggacatcaccagaatccacagcagcccaacacttacaccactttttcaattttattgctgttaaaattgttgctgcacagcttcagagctacaatcctgaagcatacgaggagctgagggagtttctggataagaattcattgagtgatggggataagttctgcgcggatttgatgagggaatccccgagacataaagatctagctatgcgcattttagaggttcgatcagcatactgtaaggacgactttgagtgggataacttgaagcgcctagcatcaaagatggtggatgattctaataaaaagctaatgacggattatatcgtggatactagctgcattgcagatggaaagncagatatgcaactaatcaaactccttaaaattttaatcccactgtgtatttagganaaactacagaaatatacatgttttcancttaattttgataaattctgtatatatgctgttattcccatttagctgcaaaattcagccanaatatgagccaaatattgtgtaatctgaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="+" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="116895" stop="123704"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="117193" g_stop="117328" g_length="136"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="136" r_length="136" r_score="0.934"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="117329" i_stop="117572" i_length="244">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="117573" g_stop="117664" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="137" r_stop="228" r_length="92" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="117665" i_stop="122583" i_length="4919">
            <donor d_prob="0.962" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="122584" g_stop="122701" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="229" r_stop="346" r_length="118" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="122702" i_stop="122858" i_length="157">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.861" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="122859" g_stop="122875" g_length="17"/>
          <reference_exon_boundary r_type="cDNA" r_start="347" r_stop="363" r_length="17" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="122876" i_stop="122953" i_length="78">
            <donor d_prob="0.998" d_score="0.00"/>
            <acceptor a_prob="0.822" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="122954" g_stop="123016" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="364" r_stop="426" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="123017" i_stop="123167" i_length="151">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.980" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="123168" g_stop="123404" g_length="237"/>
          <reference_exon_boundary r_type="cDNA" r_start="427" r_stop="672" r_length="246" r_score="0.924"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="673" polyA_stop="683"/>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="+" ref_id="SGN-E540636" ref_strand="+">
        <total_alignment_score>0.958</total_alignment_score>
        <cumulative_length_of_scored_exons>663</cumulative_length_of_scored_exons>
        <coverage percentage="0.971" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E540636" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="117193" e_stop="117328"/>
          <exon e_start="117573" e_stop="117664"/>
          <exon e_start="122584" e_stop="122701"/>
          <exon e_start="122859" e_stop="122875"/>
          <exon e_start="122954" e_stop="123016"/>
          <exon e_start="123168" e_stop="123404"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAGCAATTGTATCTTCACAGCTCTCCTTATTCCCTTCAACACTTCAAAGAGAAAACAGAAATCATCTATTCAAGTCATCGAAACAGAGAACTTGTCAATCTACTCGTTTCCACTGTCACAAGATGTATGTCCCTGGTGTGTAATCATCATTATTATCTTTTCTTCTCCTACAATTTTCAGATTTCTTTTTTCACAACACTCGTGTTCGGTTTAACTTGTTTACACCATAGGCCAATCCAAAATTTAGACTCTATTTTTTAAATTATGGGTTCATATATACTTTTTATTGTAGTTTTTATGGACTTAAAAGTATTGAATTCAGATGAACTTGATGTTTGCTTTGCTTTGATCTAGATAATAAGATGTTTGACTTATGCAGGATTTGGGACATCACCAGAATCCACAGCAGCCCAACACTTACACCACTTTTTCAATTTTATTGCTGTTAAAATTGTTGCTGCACAGCTTCAGGTTCATTGTCTTCCACTTAATTACTAGCAAATAGTTGCAGAACAGAAGTATCTCATTAACATGTTTCTGTATCCCTAAATATAGATAGAAGTATATACACAGACTTTGATAGCAGAACAATGTAAACATTGAAGTTTTCTTTATCAGATCACCTAAAGGATAACCAGAGATAAGTGTCCATCAAAAGTGAGATTTATAACCTGAAAGATAAGTCAAGTTACATGCTAAAGAGGTTTAAATGCAAGTAATAGTTATACATTATTTACATTGTTCGTAAGTGTTGAATGCCTTGAATTGGGCCCTTAATTTTCTATTGATTCTGTATGTTGGGCCCAAGCCTGTTAGGGCGTAGCTTAGCACTATATATAGACGCTATGGGAAACCCTATTCTGTAATTCTGTTTTTGCCTCTCCATAATAAAACTGCTCCCTCTCTTCCCGTGGACGTAGCCAATTTATTGGTGAACCACGTAAATCTGTTGTCTTGTTTTTCGCGTTTATATTTTCTCGTATTATCTCAAATTCCGCACAACAAATTGGTATCAGAGCCTCTCGGTTAATCGGTGTTCTTGGAGAATTTGAGATGTCTGCTTTGAACGTGAAAATCGACAAATTCACAGGGAGGAACAGTTTCAGTTTATGGCAGATCAAGATGCGGGCCTTGTTGAAACAGCAAGGCTTCTGGGCGCCGTTGTCGAAAGACAAGAACGCCGTCGTTACTCCTGAGATGGCGATTCTGGAGGAAAAGGCGCACTCGACGATCATGCTGTGTCTCGCGGATGACGTCATCACGGAGGTCTCGGATGAAGAGACTGCTGCTGGTCTGTGGTTGAAGCTGGAGAGTTTGTACATGACAAAATCTCTAACCAACAAGCTGCTTCTGAAACAACGTCTATTCGGTTTACGAATGGCTGAAGGTACACAACTCAGGGAACACTTAGAGCAATTGAATACTTTGTTATTAGAATTGGGTAATATCGATGTGAAGATCGAGGATGAAGATGCTGCCCTGATTCTGTTAGTATCTCTCCCAATGTCATTTGAGAATTTTGTTCAATCGTTCATTGTTGGGAAAGATACTGTGTCACTGGAAGAAGTCAGATCAGCCCTTCATAGCAGGGAATTACGGCATAAGGCTAACGGCACAAGTACGGACATACAGCCTTCCGGTCTGTTCACCAGTAGCGGAAAGGGAAGGAAAAACAGCGGAAAGAAAAATAAGCCGATGTCGAAGGGTGCAAAGCCGGATGATGTTTGTAATTACTGCAAGGAGAAGGGACATTGGAAATTTGATTGTCCGAAGAAGAAGAAGCAATCGGAAAAACAATCAGTGTCTGCTGCTGTTGCTGAAGAAGACACCAATTCTGAAGAAGATATTGCCCTAGTTGCGGATGAGCACACTCATCATTCAGATGTGTGGGTTCTTGATTCTAGGGCATCCTATCACATCTGTCCTAGGAGAGAGTGGTTCACGACTTATGAGTAGGTAGACGGAGGCAGCATCTCGATGGCCAACAGTTCTGTCTGCAAGGTGGTTGGGACAGGCTCGATCAAGATAAGGACACATGACGGTAGCTTCTGCACATTGAACGAGGTCAGGCACGTTCCATTGATGACGAAAAATCTGATATCTCTCAGTCTTTTGGACAGCAAGGGATTCAGCTGGTCGGGAAAAGATGGAGTCTTGCGGGTCTGGAAGGGTTCAAATTTGATTCTGAAAGGTGTCATGCGTGGTACTTTGTATTTTCTACAAGGTTCCACGGTTACAGGTTCAGCCCATGTTGCATCGTCAGAATTTCACCAGAAGGATATGACTAAGTTATGGCACATGAGACTTGGTCATATGGGTGAAAGAGGGATGCAAATTCTGTCAAAGGAGGATTTACTTGCTGGTCATAAGGTTAAGAGCCTAGAGTTTTGTGAACATTGTGTTTTTGGAAAACTACATCGCAACAAGTTTCCAAAGGCCATTCATAGAACAAAAGGCACACTTGATTATATCCATTCTGATTGCTGGGGTCCATGCCGTGTTGAGTCTTTGGGAGGCTGCAGATTTTTTGTGTCCATTATTGATGACTACTCAAGGATGACTTGGGTGTACATGATGAAGCATAAAAGTGAAGCCTTCCAGAAGTTCAAGGAGTGGAAAATTTTGATGGAAAATCAAACAGGGAAGAAGATCAAGAGGTTGCGAACTGATAATGGGCTGGAATTCTGTTGGTCTGAATTTGATCAATTCTGTAAAGATGAAGGGATTGCTCGACATCGCACAGTCAGAAATACACCACAGCAGAACGGTGTAGCTGAGCGGATGAATCAAACACTTCTGGAGAGAGCAAGGTGCATGCTCTCTAATGCTGGGCTAAATAGAAGATTCTGGGCAGAAGCGGTTAGTACAGCTTGCTACTTGATTAACCGCGGATCACATACAGGCATACAGTGCAAGACACCTATGGAGATGTGGTCTGGAAAAGCTGCTGATTATTCAAATCTGAAAGCTTTTGGTTGTACAGCTTACTATCACGTCAGTGAAGGTAAGTTAGAACCAAGAGCTAAAAAGGGAGTATTTGTGGGCTACGGAGATGGAGTGAAAGGTTTCAGAATCTGGTCTCCAGCAGAAAAGAGGGTTATTATGAGCAGGAACGTTGTCTTTGATGAAAGTTATCTGCTTAGAATCATTGTGAAGCCTACAACTACGTCAGAAACTGGGAGTCTTGACAAACAGGTGGAGTTTCAAGTCATTCAGAACGAGAGCGATTTAAAGGAACCTGAAGAGGAGGATCAAGAGCCACAGACAGAAACTGATATTCCAGAATCTATGCCATCAGATATCCATCAGAGTATAGCTCAAGATCGGCCAAGGAGGGTTGGAGTTCGGCCACCTACGAGGTATGGTTTTGAGGACATGGTGGGTTATGCACTGCAGGTTGCTGAAGAGGTAGATACATCTGAGCCGTCTACTTACAAAGAAGCCATTTTAAGTTCTTATTCTGAAAAATGGTTTGCCGCTATGGGAGATGAGATGGAGTCCCTACACAAGAATCAGACATGGGATCTGGTCATACAGCCTTCGGGGAGAAAGATTATTACTTGCAAATGGGTTTTCAAGAAGAAGGAAGGGATATCACCAGCAGAAAGAGTCAAGTATAAAGCCAGGGTTGTTGCCAGAGGTTTCAACCAAAGAGAGGGAGTGGACTACAATGAGATCTTCTCACCAGTGGTCAGACATACTTCCATCCGAGTGTTACTAGCGATAGTTGCACATCAGAATCTGGAGCTTGAACAACTTGATGTGAAGACAGCATTTCTACATGGAGAGTTGGAGGAAGAGATATACATGACTCAGCCGGATGGTTTCCAAGTTCCAGGGAAGGAAAATCACGTCTGCAAGTTGAAGAAGTCCTTATATGGACTTAAGCAGTCTCCAAGGCAGTGGTATAAAAGGTTTGACAGCTATATGGTGAAGTTGGGCTATACTCGGAGCTCATATGACTGTTGTGTCTACTACAATAGGCTCAATGATGATTCATTCATCTATCTGGTGCTTTATGTAGATGATATGTTGATAGCTGCAAAGAAGAAGTATGACATTCAGAAGCTGAAGGGTTTACTTAGTGCTGAGTTTGAGATGAAGGATCTGGGAGCCGCTCGGAAGATTTTAGGGATGGAGATCATTAGAGACAGAGAGAGAAGGAAACTTTTCTTGTCACAGAGAAGCTACATTCAGAAGGTCTTAGCGAGGTATGGCATGTCTTCATCTAAGCCCATTGATACCCCCAGTGCTGCCAATATCCATCTCACTGCCATGTTCGCTCCACAGTCAGAAGAAGAGAAGGAGTATATGTCACGAGTCCCTTATGCCAGTGCCGTAGGAAGTTTGATGTATGCTATGGTCTGTACAAGGCCAGATTTAGCACATGCAGTCAGTGTAGTGAGCAGATTCATGGGACAACCAGGGAGAGAACATTGGCAGGCTGTGAAGAGAATTTTCCGGTACCTTAGAGGTACATCTGACGTTGGTCTCATTTATGGAGGTGATACTCAGTGCTTGGTTACTGGCTATTCTGATTCAGACTATGCTGGAGATGTTGACACAAGAAGATCGATGACTGGCTGTGTGTTTACCCTTGGAGGATCTGTCGTCAGTTGGAAGGCAACTTTGCAACCTACAGTGACTTTGTCTACTACGGAAGCGGAGTACATGGCCTTGACAGAGGCTGCAAAAGAAGGGATTTGGTTGAAAGGGCTGGTTAGTGATCTTGGTCTGCATCATTATCAGGCTACGGTGTATTGTGACAGTTTGAGCGCAATTTGTCTAGCCAAGGATCAAGTCCATCATGAGAGAACCAAGCATATTGACGTAAGGTATCATTTTCTGAGAAGTGAGAAGAGAATCAAGGTGAAGAAAGTAGGAACTGCTGATAATCCTGCTGATATGTTTACAAAGTCGGTTCCACAGAGCAAGTTTCAACACTGTTTGGACTTGCTCAACATCAGAAGCTGTTAATTGCCCTGCGGGGCAACTCTGAGGAAGAGGGGGAGGCCTGACACTATCATAGTGCGTCTGAAGAATCTGTTCGGAGAATTCAAGTCAAGGTGGAGATTTGTTGAATGCCTTGAATTGGGCCCTTAATTTTCTATTGATTCTGTATGTTGGGCCCAAGCCTGTTAGGGCGTAGCTTAGCACTATATATAGACGCTATGGGAAACCCTATTCTGTAATTCTGTTTTTGCCTCTCCATAATAAAACTGCTCCCTCTCTTCCCGTGGACGTAGCCAATTTATTGGTGAACCACGTAAATCTGTTGTCTTGTTTTTCGCGTTTATATTTTCTCGTATTATCTCAAATTCCGCACAACAGTAAGTTATATAAAGTGCAGAAAATTCTTAAAATTAGTTAACCATAATTTCACATAACAGAGCTACAATCCTGAAGCATACGAGGAGCTGAGGGAGTTTCTGGATAAGAATTCATTGAGTGATGGGGATAAGTTCTGCGCGGATTTGATGAGGGAATCCCCGAGACATAAAGATCTAGGTACATCAACAATTTTCTAATTTCACTTGCAAGTTTTTAAGAATTTTGGTTCTGCAATTCAAGATTTTACATCTACTTCATCAAACTTTTATATCATGTTAACTTTTCTGATAATGTTTGCTTGAATCTTTGGGAACTTTCATTGGCTTCTTCACAGCTATGCGCATTTTAGAGGTTGGTTTACCCTCCAGCTTATCTTTTTTCCCCCATTATTTATGGTAATCAAACTGAATTAGATATATTTTCATAAAGGTTCGATCAGCATACTGTAAGGACGACTTTGAGTGGGATAACTTGAAGCGCCTAGCATCAAAGGTAAAATTAAAAGATTTACTTATCTTTAAAAAGAAACTTTCGATATAAAGATGTTAAAGATTAAAGCAGAAGAATGCATATAATTTCTCCTCTGTGGCACTTCTTTTTCATTCTTACTTAGCTTGTAGCTACTACCTTGAGATATTTGCAGATGGTGGATGATTCTAATAAAAAGCTAATGACGGATTATATCGTGGATACTAGCTGCATTGCAGATGGAAAG-CAGATATGCAACTAATCAAACTCCTTAAAATTTTAAT-CCACTGTGTATTTAGGA-AAACTACAG-AATATACATGTTTTCA-CTTAATTTTGATAAA-TCTGTATATATGCTGTTATT-CCATTTAGCTGCAAAATTCAGCCA-AATATGAG-CAAATATTGTGTAATCTGA</genome_strand>
        <mrna_strand>TCGAGACTAGTTCCTTCACAGCTCTCCTTATCCCCTTCAACACTTCAAAGAGAAAACAGAAATCATCTATTCAAGTCATCGAAACAGAGAACTTGTCAATCTACTCGTTTCCACTGTCACAAGATGTATGTCCCTG....................................................................................................................................................................................................................................................GATTTGGGACATCACCAGAATCCACAGCAGCCCAACACTTACACCACTTTTTCAATTTTATTGCTGTTAAAATTGTTGCTGCACAGCTTCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTACAATCCTGAAGCATACGAGGAGCTGAGGGAGTTTCTGGATAAGAATTCATTGAGTGATGGGGATAAGTTCTGCGCGGATTTGATGAGGGAATCCCCGAGACATAAAGATCTAG.............................................................................................................................................................CTATGCGCATTTTAGAG..............................................................................GTTCGATCAGCATACTGTAAGGACGACTTTGAGTGGGATAACTTGAAGCGCCTAGCATCAAAG.......................................................................................................................................................ATGGTGGATGATTCTAATAAAAAGCTAATGACGGATTATATCGTGGATACTAGCTGCATTGCAGATGGAAAGNCAGATATGCAACTAATCAAACTCCTTAAAATTTTAATCCCACTGTGTATTTAGGANAAACTACAGAAATATACATGTTTTCANCTTAATTTTGATAAATTCTGTATATATGCTGTTATTCCCATTTAGCTGCAAAATTCAGCCANAATATGAGCCAAATATTGTGTAATCTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E289703" ref_strand="+" ref_description="SGN-E289703 [cLET-4-M9]">
      <seq>cgagactagttccttcacagctctccttattcccttcaacacttcaaagagaaaacagaaatcatctattcaagtcatcgaaacagagaacttgtcaatctactcgtttccactgtcacaagatgtatgtccctggatttgggacatcaccagaatccacagcagcccaacacttacaccactttttcaattttattgctgttaaaattgttgctgcacagcttcagagctacaatcctgaagcatacgaggagctgagggagtttctggataagaattcattgagtgatggggataagttctgcgcggatttgatgaaggaatccccgag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="+" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="116895" stop="122987"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="117194" g_stop="117328" g_length="135"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="135" r_length="135" r_score="0.948"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="117329" i_stop="117572" i_length="244">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="117573" g_stop="117664" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="136" r_stop="227" r_length="92" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="117665" i_stop="122583" i_length="4919">
            <donor d_prob="0.962" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="122584" g_stop="122687" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="228" r_stop="331" r_length="104" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="+" ref_id="SGN-E289703" ref_strand="+">
        <total_alignment_score>0.976</total_alignment_score>
        <cumulative_length_of_scored_exons>331</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E289703" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="117194" e_stop="117328"/>
          <exon e_start="117573" e_stop="117664"/>
          <exon e_start="122584" e_stop="122687"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGCAATTGTATCTTCACAGCTCTCCTTATTCCCTTCAACACTTCAAAGAGAAAACAGAAATCATCTATTCAAGTCATCGAAACAGAGAACTTGTCAATCTACTCGTTTCCACTGTCACAAGATGTATGTCCCTGGTGTGTAATCATCATTATTATCTTTTCTTCTCCTACAATTTTCAGATTTCTTTTTTCACAACACTCGTGTTCGGTTTAACTTGTTTACACCATAGGCCAATCCAAAATTTAGACTCTATTTTTTAAATTATGGGTTCATATATACTTTTTATTGTAGTTTTTATGGACTTAAAAGTATTGAATTCAGATGAACTTGATGTTTGCTTTGCTTTGATCTAGATAATAAGATGTTTGACTTATGCAGGATTTGGGACATCACCAGAATCCACAGCAGCCCAACACTTACACCACTTTTTCAATTTTATTGCTGTTAAAATTGTTGCTGCACAGCTTCAGGTTCATTGTCTTCCACTTAATTACTAGCAAATAGTTGCAGAACAGAAGTATCTCATTAACATGTTTCTGTATCCCTAAATATAGATAGAAGTATATACACAGACTTTGATAGCAGAACAATGTAAACATTGAAGTTTTCTTTATCAGATCACCTAAAGGATAACCAGAGATAAGTGTCCATCAAAAGTGAGATTTATAACCTGAAAGATAAGTCAAGTTACATGCTAAAGAGGTTTAAATGCAAGTAATAGTTATACATTATTTACATTGTTCGTAAGTGTTGAATGCCTTGAATTGGGCCCTTAATTTTCTATTGATTCTGTATGTTGGGCCCAAGCCTGTTAGGGCGTAGCTTAGCACTATATATAGACGCTATGGGAAACCCTATTCTGTAATTCTGTTTTTGCCTCTCCATAATAAAACTGCTCCCTCTCTTCCCGTGGACGTAGCCAATTTATTGGTGAACCACGTAAATCTGTTGTCTTGTTTTTCGCGTTTATATTTTCTCGTATTATCTCAAATTCCGCACAACAAATTGGTATCAGAGCCTCTCGGTTAATCGGTGTTCTTGGAGAATTTGAGATGTCTGCTTTGAACGTGAAAATCGACAAATTCACAGGGAGGAACAGTTTCAGTTTATGGCAGATCAAGATGCGGGCCTTGTTGAAACAGCAAGGCTTCTGGGCGCCGTTGTCGAAAGACAAGAACGCCGTCGTTACTCCTGAGATGGCGATTCTGGAGGAAAAGGCGCACTCGACGATCATGCTGTGTCTCGCGGATGACGTCATCACGGAGGTCTCGGATGAAGAGACTGCTGCTGGTCTGTGGTTGAAGCTGGAGAGTTTGTACATGACAAAATCTCTAACCAACAAGCTGCTTCTGAAACAACGTCTATTCGGTTTACGAATGGCTGAAGGTACACAACTCAGGGAACACTTAGAGCAATTGAATACTTTGTTATTAGAATTGGGTAATATCGATGTGAAGATCGAGGATGAAGATGCTGCCCTGATTCTGTTAGTATCTCTCCCAATGTCATTTGAGAATTTTGTTCAATCGTTCATTGTTGGGAAAGATACTGTGTCACTGGAAGAAGTCAGATCAGCCCTTCATAGCAGGGAATTACGGCATAAGGCTAACGGCACAAGTACGGACATACAGCCTTCCGGTCTGTTCACCAGTAGCGGAAAGGGAAGGAAAAACAGCGGAAAGAAAAATAAGCCGATGTCGAAGGGTGCAAAGCCGGATGATGTTTGTAATTACTGCAAGGAGAAGGGACATTGGAAATTTGATTGTCCGAAGAAGAAGAAGCAATCGGAAAAACAATCAGTGTCTGCTGCTGTTGCTGAAGAAGACACCAATTCTGAAGAAGATATTGCCCTAGTTGCGGATGAGCACACTCATCATTCAGATGTGTGGGTTCTTGATTCTAGGGCATCCTATCACATCTGTCCTAGGAGAGAGTGGTTCACGACTTATGAGTAGGTAGACGGAGGCAGCATCTCGATGGCCAACAGTTCTGTCTGCAAGGTGGTTGGGACAGGCTCGATCAAGATAAGGACACATGACGGTAGCTTCTGCACATTGAACGAGGTCAGGCACGTTCCATTGATGACGAAAAATCTGATATCTCTCAGTCTTTTGGACAGCAAGGGATTCAGCTGGTCGGGAAAAGATGGAGTCTTGCGGGTCTGGAAGGGTTCAAATTTGATTCTGAAAGGTGTCATGCGTGGTACTTTGTATTTTCTACAAGGTTCCACGGTTACAGGTTCAGCCCATGTTGCATCGTCAGAATTTCACCAGAAGGATATGACTAAGTTATGGCACATGAGACTTGGTCATATGGGTGAAAGAGGGATGCAAATTCTGTCAAAGGAGGATTTACTTGCTGGTCATAAGGTTAAGAGCCTAGAGTTTTGTGAACATTGTGTTTTTGGAAAACTACATCGCAACAAGTTTCCAAAGGCCATTCATAGAACAAAAGGCACACTTGATTATATCCATTCTGATTGCTGGGGTCCATGCCGTGTTGAGTCTTTGGGAGGCTGCAGATTTTTTGTGTCCATTATTGATGACTACTCAAGGATGACTTGGGTGTACATGATGAAGCATAAAAGTGAAGCCTTCCAGAAGTTCAAGGAGTGGAAAATTTTGATGGAAAATCAAACAGGGAAGAAGATCAAGAGGTTGCGAACTGATAATGGGCTGGAATTCTGTTGGTCTGAATTTGATCAATTCTGTAAAGATGAAGGGATTGCTCGACATCGCACAGTCAGAAATACACCACAGCAGAACGGTGTAGCTGAGCGGATGAATCAAACACTTCTGGAGAGAGCAAGGTGCATGCTCTCTAATGCTGGGCTAAATAGAAGATTCTGGGCAGAAGCGGTTAGTACAGCTTGCTACTTGATTAACCGCGGATCACATACAGGCATACAGTGCAAGACACCTATGGAGATGTGGTCTGGAAAAGCTGCTGATTATTCAAATCTGAAAGCTTTTGGTTGTACAGCTTACTATCACGTCAGTGAAGGTAAGTTAGAACCAAGAGCTAAAAAGGGAGTATTTGTGGGCTACGGAGATGGAGTGAAAGGTTTCAGAATCTGGTCTCCAGCAGAAAAGAGGGTTATTATGAGCAGGAACGTTGTCTTTGATGAAAGTTATCTGCTTAGAATCATTGTGAAGCCTACAACTACGTCAGAAACTGGGAGTCTTGACAAACAGGTGGAGTTTCAAGTCATTCAGAACGAGAGCGATTTAAAGGAACCTGAAGAGGAGGATCAAGAGCCACAGACAGAAACTGATATTCCAGAATCTATGCCATCAGATATCCATCAGAGTATAGCTCAAGATCGGCCAAGGAGGGTTGGAGTTCGGCCACCTACGAGGTATGGTTTTGAGGACATGGTGGGTTATGCACTGCAGGTTGCTGAAGAGGTAGATACATCTGAGCCGTCTACTTACAAAGAAGCCATTTTAAGTTCTTATTCTGAAAAATGGTTTGCCGCTATGGGAGATGAGATGGAGTCCCTACACAAGAATCAGACATGGGATCTGGTCATACAGCCTTCGGGGAGAAAGATTATTACTTGCAAATGGGTTTTCAAGAAGAAGGAAGGGATATCACCAGCAGAAAGAGTCAAGTATAAAGCCAGGGTTGTTGCCAGAGGTTTCAACCAAAGAGAGGGAGTGGACTACAATGAGATCTTCTCACCAGTGGTCAGACATACTTCCATCCGAGTGTTACTAGCGATAGTTGCACATCAGAATCTGGAGCTTGAACAACTTGATGTGAAGACAGCATTTCTACATGGAGAGTTGGAGGAAGAGATATACATGACTCAGCCGGATGGTTTCCAAGTTCCAGGGAAGGAAAATCACGTCTGCAAGTTGAAGAAGTCCTTATATGGACTTAAGCAGTCTCCAAGGCAGTGGTATAAAAGGTTTGACAGCTATATGGTGAAGTTGGGCTATACTCGGAGCTCATATGACTGTTGTGTCTACTACAATAGGCTCAATGATGATTCATTCATCTATCTGGTGCTTTATGTAGATGATATGTTGATAGCTGCAAAGAAGAAGTATGACATTCAGAAGCTGAAGGGTTTACTTAGTGCTGAGTTTGAGATGAAGGATCTGGGAGCCGCTCGGAAGATTTTAGGGATGGAGATCATTAGAGACAGAGAGAGAAGGAAACTTTTCTTGTCACAGAGAAGCTACATTCAGAAGGTCTTAGCGAGGTATGGCATGTCTTCATCTAAGCCCATTGATACCCCCAGTGCTGCCAATATCCATCTCACTGCCATGTTCGCTCCACAGTCAGAAGAAGAGAAGGAGTATATGTCACGAGTCCCTTATGCCAGTGCCGTAGGAAGTTTGATGTATGCTATGGTCTGTACAAGGCCAGATTTAGCACATGCAGTCAGTGTAGTGAGCAGATTCATGGGACAACCAGGGAGAGAACATTGGCAGGCTGTGAAGAGAATTTTCCGGTACCTTAGAGGTACATCTGACGTTGGTCTCATTTATGGAGGTGATACTCAGTGCTTGGTTACTGGCTATTCTGATTCAGACTATGCTGGAGATGTTGACACAAGAAGATCGATGACTGGCTGTGTGTTTACCCTTGGAGGATCTGTCGTCAGTTGGAAGGCAACTTTGCAACCTACAGTGACTTTGTCTACTACGGAAGCGGAGTACATGGCCTTGACAGAGGCTGCAAAAGAAGGGATTTGGTTGAAAGGGCTGGTTAGTGATCTTGGTCTGCATCATTATCAGGCTACGGTGTATTGTGACAGTTTGAGCGCAATTTGTCTAGCCAAGGATCAAGTCCATCATGAGAGAACCAAGCATATTGACGTAAGGTATCATTTTCTGAGAAGTGAGAAGAGAATCAAGGTGAAGAAAGTAGGAACTGCTGATAATCCTGCTGATATGTTTACAAAGTCGGTTCCACAGAGCAAGTTTCAACACTGTTTGGACTTGCTCAACATCAGAAGCTGTTAATTGCCCTGCGGGGCAACTCTGAGGAAGAGGGGGAGGCCTGACACTATCATAGTGCGTCTGAAGAATCTGTTCGGAGAATTCAAGTCAAGGTGGAGATTTGTTGAATGCCTTGAATTGGGCCCTTAATTTTCTATTGATTCTGTATGTTGGGCCCAAGCCTGTTAGGGCGTAGCTTAGCACTATATATAGACGCTATGGGAAACCCTATTCTGTAATTCTGTTTTTGCCTCTCCATAATAAAACTGCTCCCTCTCTTCCCGTGGACGTAGCCAATTTATTGGTGAACCACGTAAATCTGTTGTCTTGTTTTTCGCGTTTATATTTTCTCGTATTATCTCAAATTCCGCACAACAGTAAGTTATATAAAGTGCAGAAAATTCTTAAAATTAGTTAACCATAATTTCACATAACAGAGCTACAATCCTGAAGCATACGAGGAGCTGAGGGAGTTTCTGGATAAGAATTCATTGAGTGATGGGGATAAGTTCTGCGCGGATTTGATGAGGGAATCCCCGAG</genome_strand>
        <mrna_strand>CGAGACTAGTTCCTTCACAGCTCTCCTTATTCCCTTCAACACTTCAAAGAGAAAACAGAAATCATCTATTCAAGTCATCGAAACAGAGAACTTGTCAATCTACTCGTTTCCACTGTCACAAGATGTATGTCCCTG....................................................................................................................................................................................................................................................GATTTGGGACATCACCAGAATCCACAGCAGCCCAACACTTACACCACTTTTTCAATTTTATTGCTGTTAAAATTGTTGCTGCACAGCTTCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTACAATCCTGAAGCATACGAGGAGCTGAGGGAGTTTCTGGATAAGAATTCATTGAGTGATGGGGATAAGTTCTGCGCGGATTTGATGAAGGAATCCCCGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E539761" ref_strand="+" ref_description="SGN-E539761 [TUS-59-K24]">
      <seq>tacgtcagaaactaggagtcttgacaaacaggtggagtttcaagtcattcagaacgagagcgatttaaaggaacctgaagaggaggatcaagagccacagactgaaactgatattccagaatctatgccatcagatatccatcagagtatagctcaagatcggccaaggagggttggagttcggccacctacgaggtatggttttgaggacatggtgggttatgcactgcaggttgctgaagaggtagatacatctgagccgtctacttacaaagaagccattttaagttctgattctgaaaaatggtttgccgctatgggagatgagatggagtccctacacaagaatcagacatgggatctggtcatacagccttcggggagaaagattattacttgcaaatgggttttcaagaagaaggaagggatatcaccagcagaaggagtcaagtataaagtcagggttgttgctagaggtttcaaccaaagagagggagtggactacaatgagatcttctcaccagtggtcagacatacttccatccgagtgttactagcgatagttgcacatcagaatctggagcttgaaacacttgatgtgaagacagcgtttctacatggagagttggaggaagagatatacatgact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="+" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="120058" stop="121306"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="120358" g_stop="121006" g_length="649"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="649" r_length="649" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="+" ref_id="SGN-E539761" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>649</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E539761" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="120358" e_stop="121006"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TACGTCAGAAACTGGGAGTCTTGACAAACAGGTGGAGTTTCAAGTCATTCAGAACGAGAGCGATTTAAAGGAACCTGAAGAGGAGGATCAAGAGCCACAGACAGAAACTGATATTCCAGAATCTATGCCATCAGATATCCATCAGAGTATAGCTCAAGATCGGCCAAGGAGGGTTGGAGTTCGGCCACCTACGAGGTATGGTTTTGAGGACATGGTGGGTTATGCACTGCAGGTTGCTGAAGAGGTAGATACATCTGAGCCGTCTACTTACAAAGAAGCCATTTTAAGTTCTTATTCTGAAAAATGGTTTGCCGCTATGGGAGATGAGATGGAGTCCCTACACAAGAATCAGACATGGGATCTGGTCATACAGCCTTCGGGGAGAAAGATTATTACTTGCAAATGGGTTTTCAAGAAGAAGGAAGGGATATCACCAGCAGAAAGAGTCAAGTATAAAGCCAGGGTTGTTGCCAGAGGTTTCAACCAAAGAGAGGGAGTGGACTACAATGAGATCTTCTCACCAGTGGTCAGACATACTTCCATCCGAGTGTTACTAGCGATAGTTGCACATCAGAATCTGGAGCTTGAACAACTTGATGTGAAGACAGCATTTCTACATGGAGAGTTGGAGGAAGAGATATACATGACT</genome_strand>
        <mrna_strand>TACGTCAGAAACTAGGAGTCTTGACAAACAGGTGGAGTTTCAAGTCATTCAGAACGAGAGCGATTTAAAGGAACCTGAAGAGGAGGATCAAGAGCCACAGACTGAAACTGATATTCCAGAATCTATGCCATCAGATATCCATCAGAGTATAGCTCAAGATCGGCCAAGGAGGGTTGGAGTTCGGCCACCTACGAGGTATGGTTTTGAGGACATGGTGGGTTATGCACTGCAGGTTGCTGAAGAGGTAGATACATCTGAGCCGTCTACTTACAAAGAAGCCATTTTAAGTTCTGATTCTGAAAAATGGTTTGCCGCTATGGGAGATGAGATGGAGTCCCTACACAAGAATCAGACATGGGATCTGGTCATACAGCCTTCGGGGAGAAAGATTATTACTTGCAAATGGGTTTTCAAGAAGAAGGAAGGGATATCACCAGCAGAAGGAGTCAAGTATAAAGTCAGGGTTGTTGCTAGAGGTTTCAACCAAAGAGAGGGAGTGGACTACAATGAGATCTTCTCACCAGTGGTCAGACATACTTCCATCCGAGTGTTACTAGCGATAGTTGCACATCAGAATCTGGAGCTTGAAACACTTGATGTGAAGACAGCGTTTCTACATGGAGAGTTGGAGGAAGAGATATACATGACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E284788" ref_strand="+" ref_description="SGN-E284788 [cLES-3-F2]">
      <seq>acgttagaaactaggagtcttgacaaacaggtggagtttcaagtcattcagaacgagagcgatttaaaggaacctgaagaggaggatcaagagccacagactgaaactgatattccagaatctatgccatcagatatccatcagagtatagctcaagatcggtcaaggagggttggagttcggccacctacgaggtatggttttgaggacatggtgggttatgcactgcaggctgctgaagaggtagatacatctgagccgtctacttacaaagaagccattttaagttctgattctgaaaaatggtttgccgatatgggagatgagatggagtccctacacaagaatcagacatgggatctggtcatacagtcttcggggagaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="+" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="120059" stop="121043"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="120359" g_stop="120743" g_length="385"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="385" r_length="385" r_score="0.979"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="+" ref_id="SGN-E284788" ref_strand="+">
        <total_alignment_score>0.979</total_alignment_score>
        <cumulative_length_of_scored_exons>385</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E284788" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="120359" e_stop="120743"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACGTCAGAAACTGGGAGTCTTGACAAACAGGTGGAGTTTCAAGTCATTCAGAACGAGAGCGATTTAAAGGAACCTGAAGAGGAGGATCAAGAGCCACAGACAGAAACTGATATTCCAGAATCTATGCCATCAGATATCCATCAGAGTATAGCTCAAGATCGGCCAAGGAGGGTTGGAGTTCGGCCACCTACGAGGTATGGTTTTGAGGACATGGTGGGTTATGCACTGCAGGTTGCTGAAGAGGTAGATACATCTGAGCCGTCTACTTACAAAGAAGCCATTTTAAGTTCTTATTCTGAAAAATGGTTTGCCGCTATGGGAGATGAGATGGAGTCCCTACACAAGAATCAGACATGGGATCTGGTCATACAGCCTTCGGGGAGAA</genome_strand>
        <mrna_strand>ACGTTAGAAACTAGGAGTCTTGACAAACAGGTGGAGTTTCAAGTCATTCAGAACGAGAGCGATTTAAAGGAACCTGAAGAGGAGGATCAAGAGCCACAGACTGAAACTGATATTCCAGAATCTATGCCATCAGATATCCATCAGAGTATAGCTCAAGATCGGTCAAGGAGGGTTGGAGTTCGGCCACCTACGAGGTATGGTTTTGAGGACATGGTGGGTTATGCACTGCAGGCTGCTGAAGAGGTAGATACATCTGAGCCGTCTACTTACAAAGAAGCCATTTTAAGTTCTGATTCTGAAAAATGGTTTGCCGATATGGGAGATGAGATGGAGTCCCTACACAAGAATCAGACATGGGATCTGGTCATACAGTCTTCGGGGAGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E343338" ref_strand="+" ref_description="SGN-E343338 [cTOF-17-N22]">
      <seq>gtttccaagttccagggaaggaaaatcacgtctgcaagttgaagaagtccttatatggacttaagcagtctccaaggcagtggtataaaaggtttgacagctatatggtgaagttgggctatactcggagctcatatgattgttgtgtctactacaataggctcaatgatgattcattcatctatctggtgctttatgtagatgatatgttgatagctgcaaagaagaagtatgacattcagaagctgaagggtttacttagtgctgagtttgagatgaaggatctgggagccgctcggaagattttagggatggagatcattagagacagagagagaaggaaacttttcttgtcacagagaagctacattcagaaggtcttggcgaggtttggcatgtcttcatctaagcccattgatacccccagtgctgccaatatccatctcactgccatgttcgctccacagtcagaagaagagaaggagtatatgtcacgagtcccttatgccagtgccgtaagaagtttgatgtatgctatggtctgtacaaggccagatttagcacatgcagtcagtgtagtgagcagattcatgggacaaccagggagagaacattggcaggctgtgaagagaattttccggtaccttagaggtacatctgacgttggtctcatttatggaggtgatactcagtgcttggttactggctattctgattcagactatgctggagatgttgacacaagaagatcgatgactggctatgtgtttaccctgggaggatctgtcgtcagttggaaggcaacttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="+" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="120717" stop="122124"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="121017" g_stop="121824" g_length="808"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="808" r_length="808" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="+" ref_id="SGN-E343338" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>808</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E343338" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="121017" e_stop="121824"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTCCAAGTTCCAGGGAAGGAAAATCACGTCTGCAAGTTGAAGAAGTCCTTATATGGACTTAAGCAGTCTCCAAGGCAGTGGTATAAAAGGTTTGACAGCTATATGGTGAAGTTGGGCTATACTCGGAGCTCATATGACTGTTGTGTCTACTACAATAGGCTCAATGATGATTCATTCATCTATCTGGTGCTTTATGTAGATGATATGTTGATAGCTGCAAAGAAGAAGTATGACATTCAGAAGCTGAAGGGTTTACTTAGTGCTGAGTTTGAGATGAAGGATCTGGGAGCCGCTCGGAAGATTTTAGGGATGGAGATCATTAGAGACAGAGAGAGAAGGAAACTTTTCTTGTCACAGAGAAGCTACATTCAGAAGGTCTTAGCGAGGTATGGCATGTCTTCATCTAAGCCCATTGATACCCCCAGTGCTGCCAATATCCATCTCACTGCCATGTTCGCTCCACAGTCAGAAGAAGAGAAGGAGTATATGTCACGAGTCCCTTATGCCAGTGCCGTAGGAAGTTTGATGTATGCTATGGTCTGTACAAGGCCAGATTTAGCACATGCAGTCAGTGTAGTGAGCAGATTCATGGGACAACCAGGGAGAGAACATTGGCAGGCTGTGAAGAGAATTTTCCGGTACCTTAGAGGTACATCTGACGTTGGTCTCATTTATGGAGGTGATACTCAGTGCTTGGTTACTGGCTATTCTGATTCAGACTATGCTGGAGATGTTGACACAAGAAGATCGATGACTGGCTGTGTGTTTACCCTTGGAGGATCTGTCGTCAGTTGGAAGGCAACTTT</genome_strand>
        <mrna_strand>GTTTCCAAGTTCCAGGGAAGGAAAATCACGTCTGCAAGTTGAAGAAGTCCTTATATGGACTTAAGCAGTCTCCAAGGCAGTGGTATAAAAGGTTTGACAGCTATATGGTGAAGTTGGGCTATACTCGGAGCTCATATGATTGTTGTGTCTACTACAATAGGCTCAATGATGATTCATTCATCTATCTGGTGCTTTATGTAGATGATATGTTGATAGCTGCAAAGAAGAAGTATGACATTCAGAAGCTGAAGGGTTTACTTAGTGCTGAGTTTGAGATGAAGGATCTGGGAGCCGCTCGGAAGATTTTAGGGATGGAGATCATTAGAGACAGAGAGAGAAGGAAACTTTTCTTGTCACAGAGAAGCTACATTCAGAAGGTCTTGGCGAGGTTTGGCATGTCTTCATCTAAGCCCATTGATACCCCCAGTGCTGCCAATATCCATCTCACTGCCATGTTCGCTCCACAGTCAGAAGAAGAGAAGGAGTATATGTCACGAGTCCCTTATGCCAGTGCCGTAAGAAGTTTGATGTATGCTATGGTCTGTACAAGGCCAGATTTAGCACATGCAGTCAGTGTAGTGAGCAGATTCATGGGACAACCAGGGAGAGAACATTGGCAGGCTGTGAAGAGAATTTTCCGGTACCTTAGAGGTACATCTGACGTTGGTCTCATTTATGGAGGTGATACTCAGTGCTTGGTTACTGGCTATTCTGATTCAGACTATGCTGGAGATGTTGACACAAGAAGATCGATGACTGGCTATGTGTTTACCCTGGGAGGATCTGTCGTCAGTTGGAAGGCAACTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E700569" ref_strand="+" ref_description="SGN-E700569 [FA13CA05]">
      <seq>ccctttaaaatttctctctcttcattaaaacgaaagcttggacccctagagattctaaacgatggtgacacctaccactactgacgatgttaccttcttgtcatttccctgtctttctttcgccatgcttcttcttcttcctcttacctctgtttctgcacaacccctttaattcttgactaacaagaacgaacaaaacagaaaatgaatagaaatagctgtaagcaagacacccttttcccccttttgccactagtggtgattgtggcaacgggtttttactcatcttttgttgccgaacgaaacactgatccgaatgatttgcaagctcttcaggtcttgcatgcttcactgaataatccttcacagctctctaattggaagtcgaatggtggcgatccctgtggtgagtcttgcaaaggaatcacttgtcaggcctcttctgttgtttcaattcaaattcctgatctgggactcaatggaacgctgggatacatgctacatggtcttacctcgttacagaacttggatttgagcggccacaccattcatgattcaattccatatcagctcccacccaatctcacctacctgaatctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="+" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="138798" stop="140594"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="139097" g_stop="139419" g_length="323"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="322" r_length="322" r_score="0.954"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="139420" i_stop="139997" i_length="578">
            <donor d_prob="0.916" d_score="0.96"/>
            <acceptor a_prob="0.912" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="139998" g_stop="140130" g_length="133"/>
          <reference_exon_boundary r_type="cDNA" r_start="323" r_stop="455" r_length="133" r_score="0.985"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="140131" i_stop="140219" i_length="89">
            <donor d_prob="0.943" d_score="0.98"/>
            <acceptor a_prob="0.958" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="140220" g_stop="140291" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="456" r_stop="527" r_length="72" r_score="0.944"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="140292" i_stop="140380" i_length="89">
            <donor d_prob="0.000" d_score="0.94"/>
            <acceptor a_prob="0.991" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="140381" g_stop="140446" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="528" r_stop="593" r_length="66" r_score="0.894"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="140447" i_stop="140537" i_length="91">
            <donor d_prob="0.959" d_score="0.88"/>
            <acceptor a_prob="0.999" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="140538" g_stop="140544" g_length="7"/>
          <reference_exon_boundary r_type="cDNA" r_start="594" r_stop="600" r_length="7" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="+" ref_id="SGN-E700569" ref_strand="+">
        <total_alignment_score>0.953</total_alignment_score>
        <cumulative_length_of_scored_exons>601</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E700569" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="139097" e_stop="139419"/>
          <exon e_start="139998" e_stop="140130"/>
          <exon e_start="140220" e_stop="140291"/>
          <exon e_start="140381" e_stop="140446"/>
          <exon e_start="140538" e_stop="140544"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTTGTATAAATTTCTCTCTCTTCATTAAAACGAAAGCTTGGAATCGGAGAGTTTCTAAACGATGGTGACACCTACCACTACTGACGATGTTACCTTCTTGTCATTTCCCTGTCTTTCTTTCGCCATGCTTCTTCTTCTTCCTCTTACCTGTGTTTCTGGACAACCCCTTTAATTCTTGACTAACAAGAACGAACAAAACAGAAAATGAATAGAAATAGCTGTAAGCAAGACACCCTTTTCCCCCTTTTGCCACTAGTGGTGATTGTGGCAGTGGGTTTTTACTCATCTTTTGTTGCGGAAGGAAACACTGATCCGAATGATTGTGAGTTTCTTCACTAGTTGAAAATCTTGGATCCGTTTTTAGACCTTCATTATCGATTTTGAGCTTAGTGGTTTGGGTGTTTTTCTGTTTTCTTGAATGTGTTGGAGGAAGAGGCTTTTTTTGTTATTTGGTTTTGCCACTCTGTGAATGTTGTGATATAAGAGCACATTTCTTGTGATTGTTTGAATGCCTGATTTGGTAATGTATTTGTTTGCCCTTCTTCTGGGGTTCATTTTATTCCCCTTTTTGTTGGGTTTCCGAGTCAATGCAAGTCAAGATTGATGAGTTGGTACCAAAAAATGGATTCTTGATCTTTGTCCTAAAAATTATATGGCTGGGATTTTTTGTGATTATAATGTGAGAACGCATGCAAATGAATTTAAACTGTTTGATTTGATAAGATAATATGATCTCTTGCCCTTTCTTGGCGTCTTGCTTGTATTTAATTAGTTTCAGAGCCAACACTAGCTTAACATTGAGGCTTTTCTTGTTGAATCTTGATAAGATAAATATTGAATCTTGGTTCTTGTTGGAGAGATGTTCTGGCTTTGTCGTTGCCTGACTCTTGTAATCTGCAGTGCAAGCTCTTCAGGTCTTGTATGCTTCACTGAATAATCCTTCACAGCTCTCTAATTGGAAGTCGAATGGTGGCGATCCCTGTGGTGAGTCTTGGAAAGGAATCACTTGTCAGGCCTCTTCTGTTGTTTCAATGTAAGTTTACATAGCATTAGCTTTGTGGGCGTCATCATACGTTTTAGTTATGATTTGATTGATACAATAGCTGGTTCTTGCTGAAACAGTCAAATTCCTGATTTGGGACTCAATGGAACGTTGGGATACATGCTAAATGGTCTTACCTCGTTAAAGAACTTGTAAGAGCTTGTCCTTTTAGCGGTAAAAGGATAATTTAGAGGACCTATTATCACAATAAAATTGAACTTCTGATATCTGTTGTCTTCAGGGATTTGAGCGGCAACAACATTCATGATTCTATTCCATATCAGCTTCCACCCAATCTCACTAGCCTGTAATGTTGACTCCTTGCTATGTGTTTGGTTTGTTTGAAAACGTCCTGGTTTATGATTGTCCCACTGGAACTATAATCATTGTCAATGCAGGAATCTT</genome_strand>
        <mrna_strand>CCCTTTA-AAATTTCTCTCTCTTCATTAAAACGAAAGCTTGGACCCCTAGAGATTCTAAACGATGGTGACACCTACCACTACTGACGATGTTACCTTCTTGTCATTTCCCTGTCTTTCTTTCGCCATGCTTCTTCTTCTTCCTCTTACCTCTGTTTCTGCACAACCCCTTTAATTCTTGACTAACAAGAACGAACAAAACAGAAAATGAATAGAAATAGCTGTAAGCAAGACACCCTTTTCCCCCTTTTGCCACTAGTGGTGATTGTGGCAACGGGTTTTTACTCATCTTTTGTTGCCGAACGAAACACTGATCCGAATGATT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAAGCTCTTCAGGTCTTGCATGCTTCACTGAATAATCCTTCACAGCTCTCTAATTGGAAGTCGAATGGTGGCGATCCCTGTGGTGAGTCTTGCAAAGGAATCACTTGTCAGGCCTCTTCTGTTGTTTCAAT.........................................................................................TCAAATTCCTGATCTGGGACTCAATGGAACGCTGGGATACATGCTACATGGTCTTACCTCGTTACAGAACTT.........................................................................................GGATTTGAGCGGCCACACCATTCATGATTCAATTCCATATCAGCTCCCACCCAATCTCACCTACCT...........................................................................................GAATCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E335710" ref_strand="+" ref_description="SGN-E335710 [cTOE-8-M24]">
      <seq>tataaatttctctctcttcattaaaacgaaagcttggaatcggagagtttctaaacgatggtgacacctaccactactgacgatgttaccttcttgtcatttccctgtctttctttcgccatgcttcttcttcttcctcttacctctgtttctgcacaacccctttaattcttgactaacaagaacgaacaaaacagaaaatgaatagaaatagctgtaagcaagacacccttttcccccttttgccactagtggtgattgtggcagtgggtttttactcatcttttgttgcggaaggaaacactgatccgaatgatttgcaagctcttcaggtcttgtatgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="+" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="138802" stop="140322"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="139102" g_stop="139419" g_length="318"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="318" r_length="318" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="139420" i_stop="139997" i_length="578">
            <donor d_prob="0.916" d_score="1.00"/>
            <acceptor a_prob="0.912" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="139998" g_stop="140022" g_length="25"/>
          <reference_exon_boundary r_type="cDNA" r_start="319" r_stop="343" r_length="25" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="+" ref_id="SGN-E335710" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>343</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E335710" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="139102" e_stop="139419"/>
          <exon e_start="139998" e_stop="140022"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATAAATTTCTCTCTCTTCATTAAAACGAAAGCTTGGAATCGGAGAGTTTCTAAACGATGGTGACACCTACCACTACTGACGATGTTACCTTCTTGTCATTTCCCTGTCTTTCTTTCGCCATGCTTCTTCTTCTTCCTCTTACCTGTGTTTCTGGACAACCCCTTTAATTCTTGACTAACAAGAACGAACAAAACAGAAAATGAATAGAAATAGCTGTAAGCAAGACACCCTTTTCCCCCTTTTGCCACTAGTGGTGATTGTGGCAGTGGGTTTTTACTCATCTTTTGTTGCGGAAGGAAACACTGATCCGAATGATTGTGAGTTTCTTCACTAGTTGAAAATCTTGGATCCGTTTTTAGACCTTCATTATCGATTTTGAGCTTAGTGGTTTGGGTGTTTTTCTGTTTTCTTGAATGTGTTGGAGGAAGAGGCTTTTTTTGTTATTTGGTTTTGCCACTCTGTGAATGTTGTGATATAAGAGCACATTTCTTGTGATTGTTTGAATGCCTGATTTGGTAATGTATTTGTTTGCCCTTCTTCTGGGGTTCATTTTATTCCCCTTTTTGTTGGGTTTCCGAGTCAATGCAAGTCAAGATTGATGAGTTGGTACCAAAAAATGGATTCTTGATCTTTGTCCTAAAAATTATATGGCTGGGATTTTTTGTGATTATAATGTGAGAACGCATGCAAATGAATTTAAACTGTTTGATTTGATAAGATAATATGATCTCTTGCCCTTTCTTGGCGTCTTGCTTGTATTTAATTAGTTTCAGAGCCAACACTAGCTTAACATTGAGGCTTTTCTTGTTGAATCTTGATAAGATAAATATTGAATCTTGGTTCTTGTTGGAGAGATGTTCTGGCTTTGTCGTTGCCTGACTCTTGTAATCTGCAGTGCAAGCTCTTCAGGTCTTGTATGC</genome_strand>
        <mrna_strand>TATAAATTTCTCTCTCTTCATTAAAACGAAAGCTTGGAATCGGAGAGTTTCTAAACGATGGTGACACCTACCACTACTGACGATGTTACCTTCTTGTCATTTCCCTGTCTTTCTTTCGCCATGCTTCTTCTTCTTCCTCTTACCTCTGTTTCTGCACAACCCCTTTAATTCTTGACTAACAAGAACGAACAAAACAGAAAATGAATAGAAATAGCTGTAAGCAAGACACCCTTTTCCCCCTTTTGCCACTAGTGGTGATTGTGGCAGTGGGTTTTTACTCATCTTTTGTTGCGGAAGGAAACACTGATCCGAATGATT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAAGCTCTTCAGGTCTTGTATGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E269407" ref_strand="+" ref_description="SGN-E269407 [cLEM-2-G1]">
      <seq>taaacgatggtgacacctaccactactgacgatgttaccttcttgtcatttccctgtctttctttcgccatgcttcttcttcttcctcttacctctgtttctgcacaacccctttaattcttgactaacaagaacgaacaaaacagaaaatgaatagaaatagctgtgagcaagacacccttttcccccttttgccactagtggtgattgtggcagtgggtttttactcatcttttgttgcggaaggaaacactgatccgaatgatttgcaagctcttcaggtcttgtatgcttcactgaataatccttcacagctctctaattggaagtcgaatggtggcgatccctgtggtgagtcttggaaaggaatcacttgtcaggcctcttctgttgtttcaattcaaattcctgatttgggactcaatggaacgttgggatacatgctaaatggtcttacctcgttaaagaacttggatttgagcggcaacaacattcatgattctattccatatcagctttcacccaatctcactagcctgaatcttgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="+" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="138853" stop="140755"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="139153" g_stop="139419" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="267" r_length="267" r_score="0.989"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="139420" i_stop="139997" i_length="578">
            <donor d_prob="0.916" d_score="1.00"/>
            <acceptor a_prob="0.912" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="139998" g_stop="140130" g_length="133"/>
          <reference_exon_boundary r_type="cDNA" r_start="268" r_stop="400" r_length="133" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="140131" i_stop="140219" i_length="89">
            <donor d_prob="0.943" d_score="1.00"/>
            <acceptor a_prob="0.958" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="140220" g_stop="140291" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="401" r_stop="472" r_length="72" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="140292" i_stop="140380" i_length="89">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="140381" g_stop="140446" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="473" r_stop="538" r_length="66" r_score="0.985"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="140447" i_stop="140537" i_length="91">
            <donor d_prob="0.959" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="140538" g_stop="140546" g_length="9"/>
          <reference_exon_boundary r_type="cDNA" r_start="539" r_stop="547" r_length="9" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="+" ref_id="SGN-E269407" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>547</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E269407" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="139153" e_stop="139419"/>
          <exon e_start="139998" e_stop="140130"/>
          <exon e_start="140220" e_stop="140291"/>
          <exon e_start="140381" e_stop="140446"/>
          <exon e_start="140538" e_stop="140546"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAACGATGGTGACACCTACCACTACTGACGATGTTACCTTCTTGTCATTTCCCTGTCTTTCTTTCGCCATGCTTCTTCTTCTTCCTCTTACCTGTGTTTCTGGACAACCCCTTTAATTCTTGACTAACAAGAACGAACAAAACAGAAAATGAATAGAAATAGCTGTAAGCAAGACACCCTTTTCCCCCTTTTGCCACTAGTGGTGATTGTGGCAGTGGGTTTTTACTCATCTTTTGTTGCGGAAGGAAACACTGATCCGAATGATTGTGAGTTTCTTCACTAGTTGAAAATCTTGGATCCGTTTTTAGACCTTCATTATCGATTTTGAGCTTAGTGGTTTGGGTGTTTTTCTGTTTTCTTGAATGTGTTGGAGGAAGAGGCTTTTTTTGTTATTTGGTTTTGCCACTCTGTGAATGTTGTGATATAAGAGCACATTTCTTGTGATTGTTTGAATGCCTGATTTGGTAATGTATTTGTTTGCCCTTCTTCTGGGGTTCATTTTATTCCCCTTTTTGTTGGGTTTCCGAGTCAATGCAAGTCAAGATTGATGAGTTGGTACCAAAAAATGGATTCTTGATCTTTGTCCTAAAAATTATATGGCTGGGATTTTTTGTGATTATAATGTGAGAACGCATGCAAATGAATTTAAACTGTTTGATTTGATAAGATAATATGATCTCTTGCCCTTTCTTGGCGTCTTGCTTGTATTTAATTAGTTTCAGAGCCAACACTAGCTTAACATTGAGGCTTTTCTTGTTGAATCTTGATAAGATAAATATTGAATCTTGGTTCTTGTTGGAGAGATGTTCTGGCTTTGTCGTTGCCTGACTCTTGTAATCTGCAGTGCAAGCTCTTCAGGTCTTGTATGCTTCACTGAATAATCCTTCACAGCTCTCTAATTGGAAGTCGAATGGTGGCGATCCCTGTGGTGAGTCTTGGAAAGGAATCACTTGTCAGGCCTCTTCTGTTGTTTCAATGTAAGTTTACATAGCATTAGCTTTGTGGGCGTCATCATACGTTTTAGTTATGATTTGATTGATACAATAGCTGGTTCTTGCTGAAACAGTCAAATTCCTGATTTGGGACTCAATGGAACGTTGGGATACATGCTAAATGGTCTTACCTCGTTAAAGAACTTGTAAGAGCTTGTCCTTTTAGCGGTAAAAGGATAATTTAGAGGACCTATTATCACAATAAAATTGAACTTCTGATATCTGTTGTCTTCAGGGATTTGAGCGGCAACAACATTCATGATTCTATTCCATATCAGCTTCCACCCAATCTCACTAGCCTGTAATGTTGACTCCTTGCTATGTGTTTGGTTTGTTTGAAAACGTCCTGGTTTATGATTGTCCCACTGGAACTATAATCATTGTCAATGCAGGAATCTTGC</genome_strand>
        <mrna_strand>TAAACGATGGTGACACCTACCACTACTGACGATGTTACCTTCTTGTCATTTCCCTGTCTTTCTTTCGCCATGCTTCTTCTTCTTCCTCTTACCTCTGTTTCTGCACAACCCCTTTAATTCTTGACTAACAAGAACGAACAAAACAGAAAATGAATAGAAATAGCTGTGAGCAAGACACCCTTTTCCCCCTTTTGCCACTAGTGGTGATTGTGGCAGTGGGTTTTTACTCATCTTTTGTTGCGGAAGGAAACACTGATCCGAATGATT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAAGCTCTTCAGGTCTTGTATGCTTCACTGAATAATCCTTCACAGCTCTCTAATTGGAAGTCGAATGGTGGCGATCCCTGTGGTGAGTCTTGGAAAGGAATCACTTGTCAGGCCTCTTCTGTTGTTTCAAT.........................................................................................TCAAATTCCTGATTTGGGACTCAATGGAACGTTGGGATACATGCTAAATGGTCTTACCTCGTTAAAGAACTT.........................................................................................GGATTTGAGCGGCAACAACATTCATGATTCTATTCCATATCAGCTTTCACCCAATCTCACTAGCCT...........................................................................................GAATCTTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E327594" ref_strand="+" ref_description="SGN-E327594 [cTOC-20-O16]">
      <seq>tttccctgtctttctttcgccatgcttcttcttcttcctcttacctctgtttctgcacaacccctttaattcttgactaacaagaacgaacaaaacagaaaatgaatagaaatagctgtaagcaagacacccttttcccccttttgccactagtggtgattgtggcagtgggtttttactcatcttttgttgcggaaggaaacactgatccgaatgatttgcaagctcttcaggtcttgtatgcttcactgaataatccttcacagctctctaattggaagtcgaatggtggcgatccctgtggtgagtcttggaaaggaatcacttgtcaggcctcttctgttgtttcaattcaaattcctgatttgggactcaatggaacgttgggatacatgctaaatggtcttacctcgttaaagaacttggatttgagcggcaacaacattcatgattctattccatatcagcttccacccaatctcactagcctgaatcttgcaaacaacaatataagtggcaacattccgtattcctttgctggcatggttacacttagctatctgaatcttagccataactcactctctcaaacaattggagaattgttcagcaaccactctgatctgggaaccttggatctgtcctcaaataatttttctggagatctcccctcttcattcagttcgttgacaaatctttccacacttcatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="+" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="138901" stop="141777"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="139201" g_stop="139419" g_length="219"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="219" r_length="219" r_score="0.991"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="139420" i_stop="139997" i_length="578">
            <donor d_prob="0.916" d_score="1.00"/>
            <acceptor a_prob="0.912" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="139998" g_stop="140130" g_length="133"/>
          <reference_exon_boundary r_type="cDNA" r_start="220" r_stop="352" r_length="133" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="140131" i_stop="140219" i_length="89">
            <donor d_prob="0.943" d_score="1.00"/>
            <acceptor a_prob="0.958" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="140220" g_stop="140291" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="353" r_stop="424" r_length="72" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="140292" i_stop="140380" i_length="89">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="140381" g_stop="140446" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="425" r_stop="490" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="140447" i_stop="140537" i_length="91">
            <donor d_prob="0.959" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="140538" g_stop="140609" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="491" r_stop="562" r_length="72" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="140610" i_stop="140721" i_length="112">
            <donor d_prob="0.879" d_score="1.00"/>
            <acceptor a_prob="0.800" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="140722" g_stop="140793" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="563" r_stop="634" r_length="72" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="140794" i_stop="141399" i_length="606">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="141400" g_stop="141471" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="635" r_stop="706" r_length="72" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="141472" i_stop="141549" i_length="78">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.927" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="141550" g_stop="141554" g_length="5"/>
          <reference_exon_boundary r_type="cDNA" r_start="707" r_stop="711" r_length="5" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="+" ref_id="SGN-E327594" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>711</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E327594" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="139201" e_stop="139419"/>
          <exon e_start="139998" e_stop="140130"/>
          <exon e_start="140220" e_stop="140291"/>
          <exon e_start="140381" e_stop="140446"/>
          <exon e_start="140538" e_stop="140609"/>
          <exon e_start="140722" e_stop="140793"/>
          <exon e_start="141400" e_stop="141471"/>
          <exon e_start="141550" e_stop="141554"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCCCTGTCTTTCTTTCGCCATGCTTCTTCTTCTTCCTCTTACCTGTGTTTCTGGACAACCCCTTTAATTCTTGACTAACAAGAACGAACAAAACAGAAAATGAATAGAAATAGCTGTAAGCAAGACACCCTTTTCCCCCTTTTGCCACTAGTGGTGATTGTGGCAGTGGGTTTTTACTCATCTTTTGTTGCGGAAGGAAACACTGATCCGAATGATTGTGAGTTTCTTCACTAGTTGAAAATCTTGGATCCGTTTTTAGACCTTCATTATCGATTTTGAGCTTAGTGGTTTGGGTGTTTTTCTGTTTTCTTGAATGTGTTGGAGGAAGAGGCTTTTTTTGTTATTTGGTTTTGCCACTCTGTGAATGTTGTGATATAAGAGCACATTTCTTGTGATTGTTTGAATGCCTGATTTGGTAATGTATTTGTTTGCCCTTCTTCTGGGGTTCATTTTATTCCCCTTTTTGTTGGGTTTCCGAGTCAATGCAAGTCAAGATTGATGAGTTGGTACCAAAAAATGGATTCTTGATCTTTGTCCTAAAAATTATATGGCTGGGATTTTTTGTGATTATAATGTGAGAACGCATGCAAATGAATTTAAACTGTTTGATTTGATAAGATAATATGATCTCTTGCCCTTTCTTGGCGTCTTGCTTGTATTTAATTAGTTTCAGAGCCAACACTAGCTTAACATTGAGGCTTTTCTTGTTGAATCTTGATAAGATAAATATTGAATCTTGGTTCTTGTTGGAGAGATGTTCTGGCTTTGTCGTTGCCTGACTCTTGTAATCTGCAGTGCAAGCTCTTCAGGTCTTGTATGCTTCACTGAATAATCCTTCACAGCTCTCTAATTGGAAGTCGAATGGTGGCGATCCCTGTGGTGAGTCTTGGAAAGGAATCACTTGTCAGGCCTCTTCTGTTGTTTCAATGTAAGTTTACATAGCATTAGCTTTGTGGGCGTCATCATACGTTTTAGTTATGATTTGATTGATACAATAGCTGGTTCTTGCTGAAACAGTCAAATTCCTGATTTGGGACTCAATGGAACGTTGGGATACATGCTAAATGGTCTTACCTCGTTAAAGAACTTGTAAGAGCTTGTCCTTTTAGCGGTAAAAGGATAATTTAGAGGACCTATTATCACAATAAAATTGAACTTCTGATATCTGTTGTCTTCAGGGATTTGAGCGGCAACAACATTCATGATTCTATTCCATATCAGCTTCCACCCAATCTCACTAGCCTGTAATGTTGACTCCTTGCTATGTGTTTGGTTTGTTTGAAAACGTCCTGGTTTATGATTGTCCCACTGGAACTATAATCATTGTCAATGCAGGAATCTTGCAAACAACAATATAAGTGGCAACATTCCGTATTCCTTTGCTGGCATGGTTACACTTAGCTATCTGTGAGTGACCAGTCTCACCAGGCACTTTCCAAAACAAAAATAACATTTGCTTGGTTTTCTCTTTATTCTATTGAATCATTTCAGGCAACTATTTAAAATAGCTTTTTTTCAGGAATCTTAGCCATAACTCACTCTCTCAAACAATTGGAGAATTGTTCAGCAACCACTCTGATCTGGGAACCTTGTAAGTGTTCTACTTAATTTTTACTTGATTGATCCTTTCTGGTAATTTTTTTTCCTTTTCTTCTTTTTCTCTAAAAGAGTTCAATACATTGCCACACTTGAAGGACTTCTTTTCTACACCAGTCCAATTCCAGTTACTAGCTTGAATTCTTAGCACCATGGTGTCTCCGACCCACAGTACACGGCCCTTCATTTGTTTTGAAGTGCCTGCAATGTACAGACACGACTGCTTCCAAATATGTTCTCAAAACAAATATAGGATCTAATCATATTCAAATGCCTCTTAGAATCATTATCTGCTTAATTTCAATGAACAATGAAGTCTGGAGGCTTGTAAAGTCCAACATTTTATTTCCCTTCGTAGCCTTTTTATGTGGGAATTCGTTTTGATTGTATTAGGATAGGTGCCCTGCTCCTCTTTGAAGCTTTCAGTTGCCTTTTGTTTTCATTTGTTGGTTCTTTCAGAATCCCATTTAAGTAAACCTACATTAGAGCTCAGTATCCCTGCTACAAAGAGCTTTCTGGCTATATTGATTCCTCATGTCCTTACAACATCTGTTTCACTATCTAATAGTTATAATTTTTCACTGATTTGCTGCTACTGCAGGGATCTGTCCTCAAATAATTTTTCTGGAGATCTCCCCTCTTCATTCAGTTCGTTGACAAATCTTTCCACACTGTAAGCATAATAATTTTCTACTAATAGGATTTGTTATTCCGTTACTTGACTTGCCCATGAAATTGGCATCTCTTGTAGTCATC</genome_strand>
        <mrna_strand>TTTCCCTGTCTTTCTTTCGCCATGCTTCTTCTTCTTCCTCTTACCTCTGTTTCTGCACAACCCCTTTAATTCTTGACTAACAAGAACGAACAAAACAGAAAATGAATAGAAATAGCTGTAAGCAAGACACCCTTTTCCCCCTTTTGCCACTAGTGGTGATTGTGGCAGTGGGTTTTTACTCATCTTTTGTTGCGGAAGGAAACACTGATCCGAATGATT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAAGCTCTTCAGGTCTTGTATGCTTCACTGAATAATCCTTCACAGCTCTCTAATTGGAAGTCGAATGGTGGCGATCCCTGTGGTGAGTCTTGGAAAGGAATCACTTGTCAGGCCTCTTCTGTTGTTTCAAT.........................................................................................TCAAATTCCTGATTTGGGACTCAATGGAACGTTGGGATACATGCTAAATGGTCTTACCTCGTTAAAGAACTT.........................................................................................GGATTTGAGCGGCAACAACATTCATGATTCTATTCCATATCAGCTTCCACCCAATCTCACTAGCCT...........................................................................................GAATCTTGCAAACAACAATATAAGTGGCAACATTCCGTATTCCTTTGCTGGCATGGTTACACTTAGCTATCT................................................................................................................GAATCTTAGCCATAACTCACTCTCTCAAACAATTGGAGAATTGTTCAGCAACCACTCTGATCTGGGAACCTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATCTGTCCTCAAATAATTTTTCTGGAGATCTCCCCTCTTCATTCAGTTCGTTGACAAATCTTTCCACACT..............................................................................TCATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E438689" ref_strand="+" ref_description="SGN-E438689 [cSTA-9-O3]">
      <seq>cgaggagaaaatgaatagaaatagctgtaagcaagacacccttttcccccttttgccagtagtggtgattgtggcagtggggttttactcatcttttgttgtggaaggaaacactgatccgaatgacttgcaagctcttcaggtcttgtatgcttcactgagtagtcctccacagctctctaattggaagtcgaatggtggcgatccctgtggtgagtcttggaaaggaatcacttgtcaggcctcttctgttgtttcaattcaaattcctgatttgggactcaatggaacgttgggatacatgctaaatggtcttacctcgttaaagaacttggatatgagcggcaacaacattcatgattctattccatatcagcttccacccaatctcactagcctgaatcttgcaaacaacaatataagtggcaacattccgtattcctttgctggcatggttacacttagctatctgaatcttagccataactcactctctcaaacaattggagaattgttcaccaaccactccgatctggga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="+" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="138997" stop="141088"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="139292" g_stop="139419" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="128" r_length="128" r_score="0.938"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="139420" i_stop="139997" i_length="578">
            <donor d_prob="0.916" d_score="0.94"/>
            <acceptor a_prob="0.912" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="139998" g_stop="140130" g_length="133"/>
          <reference_exon_boundary r_type="cDNA" r_start="129" r_stop="261" r_length="133" r_score="0.977"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="140131" i_stop="140219" i_length="89">
            <donor d_prob="0.943" d_score="1.00"/>
            <acceptor a_prob="0.958" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="140220" g_stop="140291" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="262" r_stop="333" r_length="72" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="140292" i_stop="140380" i_length="89">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="140381" g_stop="140446" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="334" r_stop="399" r_length="66" r_score="0.985"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="140447" i_stop="140537" i_length="91">
            <donor d_prob="0.959" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="140538" g_stop="140609" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="400" r_stop="471" r_length="72" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="140610" i_stop="140721" i_length="112">
            <donor d_prob="0.879" d_score="1.00"/>
            <acceptor a_prob="0.800" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="140722" g_stop="140788" g_length="67"/>
          <reference_exon_boundary r_type="cDNA" r_start="472" r_stop="538" r_length="67" r_score="0.970"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="+" ref_id="SGN-E438689" ref_strand="+">
        <total_alignment_score>0.974</total_alignment_score>
        <cumulative_length_of_scored_exons>538</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E438689" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="139292" e_stop="139419"/>
          <exon e_start="139998" e_stop="140130"/>
          <exon e_start="140220" e_stop="140291"/>
          <exon e_start="140381" e_stop="140446"/>
          <exon e_start="140538" e_stop="140609"/>
          <exon e_start="140722" e_stop="140788"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAACAGAAAATGAATAGAAATAGCTGTAAGCAAGACACCCTTTTCCCCCTTTTGCCACTAGTGGTGATTGTGGCAGTGGGTTTTTACTCATCTTTTGTTGCGGAAGGAAACACTGATCCGAATGATTGTGAGTTTCTTCACTAGTTGAAAATCTTGGATCCGTTTTTAGACCTTCATTATCGATTTTGAGCTTAGTGGTTTGGGTGTTTTTCTGTTTTCTTGAATGTGTTGGAGGAAGAGGCTTTTTTTGTTATTTGGTTTTGCCACTCTGTGAATGTTGTGATATAAGAGCACATTTCTTGTGATTGTTTGAATGCCTGATTTGGTAATGTATTTGTTTGCCCTTCTTCTGGGGTTCATTTTATTCCCCTTTTTGTTGGGTTTCCGAGTCAATGCAAGTCAAGATTGATGAGTTGGTACCAAAAAATGGATTCTTGATCTTTGTCCTAAAAATTATATGGCTGGGATTTTTTGTGATTATAATGTGAGAACGCATGCAAATGAATTTAAACTGTTTGATTTGATAAGATAATATGATCTCTTGCCCTTTCTTGGCGTCTTGCTTGTATTTAATTAGTTTCAGAGCCAACACTAGCTTAACATTGAGGCTTTTCTTGTTGAATCTTGATAAGATAAATATTGAATCTTGGTTCTTGTTGGAGAGATGTTCTGGCTTTGTCGTTGCCTGACTCTTGTAATCTGCAGTGCAAGCTCTTCAGGTCTTGTATGCTTCACTGAATAATCCTTCACAGCTCTCTAATTGGAAGTCGAATGGTGGCGATCCCTGTGGTGAGTCTTGGAAAGGAATCACTTGTCAGGCCTCTTCTGTTGTTTCAATGTAAGTTTACATAGCATTAGCTTTGTGGGCGTCATCATACGTTTTAGTTATGATTTGATTGATACAATAGCTGGTTCTTGCTGAAACAGTCAAATTCCTGATTTGGGACTCAATGGAACGTTGGGATACATGCTAAATGGTCTTACCTCGTTAAAGAACTTGTAAGAGCTTGTCCTTTTAGCGGTAAAAGGATAATTTAGAGGACCTATTATCACAATAAAATTGAACTTCTGATATCTGTTGTCTTCAGGGATTTGAGCGGCAACAACATTCATGATTCTATTCCATATCAGCTTCCACCCAATCTCACTAGCCTGTAATGTTGACTCCTTGCTATGTGTTTGGTTTGTTTGAAAACGTCCTGGTTTATGATTGTCCCACTGGAACTATAATCATTGTCAATGCAGGAATCTTGCAAACAACAATATAAGTGGCAACATTCCGTATTCCTTTGCTGGCATGGTTACACTTAGCTATCTGTGAGTGACCAGTCTCACCAGGCACTTTCCAAAACAAAAATAACATTTGCTTGGTTTTCTCTTTATTCTATTGAATCATTTCAGGCAACTATTTAAAATAGCTTTTTTTCAGGAATCTTAGCCATAACTCACTCTCTCAAACAATTGGAGAATTGTTCAGCAACCACTCTGATCTGGGA</genome_strand>
        <mrna_strand>CGAGGAGAAAATGAATAGAAATAGCTGTAAGCAAGACACCCTTTTCCCCCTTTTGCCAGTAGTGGTGATTGTGGCAGTGGGGTTTTACTCATCTTTTGTTGTGGAAGGAAACACTGATCCGAATGACT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAAGCTCTTCAGGTCTTGTATGCTTCACTGAGTAGTCCTCCACAGCTCTCTAATTGGAAGTCGAATGGTGGCGATCCCTGTGGTGAGTCTTGGAAAGGAATCACTTGTCAGGCCTCTTCTGTTGTTTCAAT.........................................................................................TCAAATTCCTGATTTGGGACTCAATGGAACGTTGGGATACATGCTAAATGGTCTTACCTCGTTAAAGAACTT.........................................................................................GGATATGAGCGGCAACAACATTCATGATTCTATTCCATATCAGCTTCCACCCAATCTCACTAGCCT...........................................................................................GAATCTTGCAAACAACAATATAAGTGGCAACATTCCGTATTCCTTTGCTGGCATGGTTACACTTAGCTATCT................................................................................................................GAATCTTAGCCATAACTCACTCTCTCAAACAATTGGAGAATTGTTCACCAACCACTCCGATCTGGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E698987" ref_strand="+" ref_description="SGN-E698987 [FA08AH03]">
      <seq>gcaagacacccttttcccccttttgccactagtggtgattgtggcagtgggtttttactcatcttttgttgcggaaggaaacactgatccgaatgatttgcaagctcttcaggtcttgtatgcttcactgaataatccttcacagctctctaattggaagtcgaatggtggcgatccctgtggtgagtcttggaaaggaatcacttgtcaggcctcttctgttgtttcaattcaaattcctgatttgggactcaatggaacgttgggatacatgctaaatggtcttacctcgttaaagaacttggatttgagcggcaacaacattcatgattctattccatatcagcttccacccaatctcactagcctgaatcttgcaaacaacaatataagtggcaacattccgtattcctttgctggcatggttacacttagctatctgaatcttagccataactcactctctcaaacaattggagaattgttcagcaaccactctgatctgggaaccttggatctgtcctcaaataatttttctggagatctcccctcttcattcagttcgttgacaaatctttccacacttcatctggaaaacaatcagctaagtggccctctcaatatcctgattgatctacctttgactaatttaaatgttgcaaagaatcattttaatggatggatcccaaatgagctcctatctatcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="+" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="139022" stop="142066"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="139322" g_stop="139419" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="98" r_length="98" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="139420" i_stop="139997" i_length="578">
            <donor d_prob="0.916" d_score="1.00"/>
            <acceptor a_prob="0.912" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="139998" g_stop="140130" g_length="133"/>
          <reference_exon_boundary r_type="cDNA" r_start="99" r_stop="231" r_length="133" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="140131" i_stop="140219" i_length="89">
            <donor d_prob="0.943" d_score="1.00"/>
            <acceptor a_prob="0.958" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="140220" g_stop="140291" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="232" r_stop="303" r_length="72" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="140292" i_stop="140380" i_length="89">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="140381" g_stop="140446" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="304" r_stop="369" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="140447" i_stop="140537" i_length="91">
            <donor d_prob="0.959" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="140538" g_stop="140609" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="370" r_stop="441" r_length="72" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="140610" i_stop="140721" i_length="112">
            <donor d_prob="0.879" d_score="1.00"/>
            <acceptor a_prob="0.800" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="140722" g_stop="140793" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="442" r_stop="513" r_length="72" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="140794" i_stop="141399" i_length="606">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="141400" g_stop="141471" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="514" r_stop="585" r_length="72" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="141472" i_stop="141549" i_length="78">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.927" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="141550" g_stop="141615" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="586" r_stop="651" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="141616" i_stop="141710" i_length="95">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="141711" g_stop="141766" g_length="56"/>
          <reference_exon_boundary r_type="cDNA" r_start="652" r_stop="707" r_length="56" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="+" ref_id="SGN-E698987" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>707</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E698987" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="139322" e_stop="139419"/>
          <exon e_start="139998" e_stop="140130"/>
          <exon e_start="140220" e_stop="140291"/>
          <exon e_start="140381" e_stop="140446"/>
          <exon e_start="140538" e_stop="140609"/>
          <exon e_start="140722" e_stop="140793"/>
          <exon e_start="141400" e_stop="141471"/>
          <exon e_start="141550" e_stop="141615"/>
          <exon e_start="141711" e_stop="141766"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAAGACACCCTTTTCCCCCTTTTGCCACTAGTGGTGATTGTGGCAGTGGGTTTTTACTCATCTTTTGTTGCGGAAGGAAACACTGATCCGAATGATTGTGAGTTTCTTCACTAGTTGAAAATCTTGGATCCGTTTTTAGACCTTCATTATCGATTTTGAGCTTAGTGGTTTGGGTGTTTTTCTGTTTTCTTGAATGTGTTGGAGGAAGAGGCTTTTTTTGTTATTTGGTTTTGCCACTCTGTGAATGTTGTGATATAAGAGCACATTTCTTGTGATTGTTTGAATGCCTGATTTGGTAATGTATTTGTTTGCCCTTCTTCTGGGGTTCATTTTATTCCCCTTTTTGTTGGGTTTCCGAGTCAATGCAAGTCAAGATTGATGAGTTGGTACCAAAAAATGGATTCTTGATCTTTGTCCTAAAAATTATATGGCTGGGATTTTTTGTGATTATAATGTGAGAACGCATGCAAATGAATTTAAACTGTTTGATTTGATAAGATAATATGATCTCTTGCCCTTTCTTGGCGTCTTGCTTGTATTTAATTAGTTTCAGAGCCAACACTAGCTTAACATTGAGGCTTTTCTTGTTGAATCTTGATAAGATAAATATTGAATCTTGGTTCTTGTTGGAGAGATGTTCTGGCTTTGTCGTTGCCTGACTCTTGTAATCTGCAGTGCAAGCTCTTCAGGTCTTGTATGCTTCACTGAATAATCCTTCACAGCTCTCTAATTGGAAGTCGAATGGTGGCGATCCCTGTGGTGAGTCTTGGAAAGGAATCACTTGTCAGGCCTCTTCTGTTGTTTCAATGTAAGTTTACATAGCATTAGCTTTGTGGGCGTCATCATACGTTTTAGTTATGATTTGATTGATACAATAGCTGGTTCTTGCTGAAACAGTCAAATTCCTGATTTGGGACTCAATGGAACGTTGGGATACATGCTAAATGGTCTTACCTCGTTAAAGAACTTGTAAGAGCTTGTCCTTTTAGCGGTAAAAGGATAATTTAGAGGACCTATTATCACAATAAAATTGAACTTCTGATATCTGTTGTCTTCAGGGATTTGAGCGGCAACAACATTCATGATTCTATTCCATATCAGCTTCCACCCAATCTCACTAGCCTGTAATGTTGACTCCTTGCTATGTGTTTGGTTTGTTTGAAAACGTCCTGGTTTATGATTGTCCCACTGGAACTATAATCATTGTCAATGCAGGAATCTTGCAAACAACAATATAAGTGGCAACATTCCGTATTCCTTTGCTGGCATGGTTACACTTAGCTATCTGTGAGTGACCAGTCTCACCAGGCACTTTCCAAAACAAAAATAACATTTGCTTGGTTTTCTCTTTATTCTATTGAATCATTTCAGGCAACTATTTAAAATAGCTTTTTTTCAGGAATCTTAGCCATAACTCACTCTCTCAAACAATTGGAGAATTGTTCAGCAACCACTCTGATCTGGGAACCTTGTAAGTGTTCTACTTAATTTTTACTTGATTGATCCTTTCTGGTAATTTTTTTTCCTTTTCTTCTTTTTCTCTAAAAGAGTTCAATACATTGCCACACTTGAAGGACTTCTTTTCTACACCAGTCCAATTCCAGTTACTAGCTTGAATTCTTAGCACCATGGTGTCTCCGACCCACAGTACACGGCCCTTCATTTGTTTTGAAGTGCCTGCAATGTACAGACACGACTGCTTCCAAATATGTTCTCAAAACAAATATAGGATCTAATCATATTCAAATGCCTCTTAGAATCATTATCTGCTTAATTTCAATGAACAATGAAGTCTGGAGGCTTGTAAAGTCCAACATTTTATTTCCCTTCGTAGCCTTTTTATGTGGGAATTCGTTTTGATTGTATTAGGATAGGTGCCCTGCTCCTCTTTGAAGCTTTCAGTTGCCTTTTGTTTTCATTTGTTGGTTCTTTCAGAATCCCATTTAAGTAAACCTACATTAGAGCTCAGTATCCCTGCTACAAAGAGCTTTCTGGCTATATTGATTCCTCATGTCCTTACAACATCTGTTTCACTATCTAATAGTTATAATTTTTCACTGATTTGCTGCTACTGCAGGGATCTGTCCTCAAATAATTTTTCTGGAGATCTCCCCTCTTCATTCAGTTCGTTGACAAATCTTTCCACACTGTAAGCATAATAATTTTCTACTAATAGGATTTGTTATTCCGTTACTTGACTTGCCCATGAAATTGGCATCTCTTGTAGTCATCTGGAAAACAATCAGCTAAGTGGCCCTCTCAATATCCTGATTGATCTACCTTTGACTAATTTGTAAGTTTCAATACCTCTTCTTGAATTGATGGGCTTAGCTAGTTTTATTCAATGCCAGTAGAGTGTTTTATGGGCAAAAAAAAACCTTTTTGCAGAAATGTTGCAAAGAATCATTTTAATGGATGGATCCCAAATGAGCTCCTATCTATCC</genome_strand>
        <mrna_strand>GCAAGACACCCTTTTCCCCCTTTTGCCACTAGTGGTGATTGTGGCAGTGGGTTTTTACTCATCTTTTGTTGCGGAAGGAAACACTGATCCGAATGATT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAAGCTCTTCAGGTCTTGTATGCTTCACTGAATAATCCTTCACAGCTCTCTAATTGGAAGTCGAATGGTGGCGATCCCTGTGGTGAGTCTTGGAAAGGAATCACTTGTCAGGCCTCTTCTGTTGTTTCAAT.........................................................................................TCAAATTCCTGATTTGGGACTCAATGGAACGTTGGGATACATGCTAAATGGTCTTACCTCGTTAAAGAACTT.........................................................................................GGATTTGAGCGGCAACAACATTCATGATTCTATTCCATATCAGCTTCCACCCAATCTCACTAGCCT...........................................................................................GAATCTTGCAAACAACAATATAAGTGGCAACATTCCGTATTCCTTTGCTGGCATGGTTACACTTAGCTATCT................................................................................................................GAATCTTAGCCATAACTCACTCTCTCAAACAATTGGAGAATTGTTCAGCAACCACTCTGATCTGGGAACCTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATCTGTCCTCAAATAATTTTTCTGGAGATCTCCCCTCTTCATTCAGTTCGTTGACAAATCTTTCCACACT..............................................................................TCATCTGGAAAACAATCAGCTAAGTGGCCCTCTCAATATCCTGATTGATCTACCTTTGACTAATTT...............................................................................................AAATGTTGCAAAGAATCATTTTAATGGATGGATCCCAAATGAGCTCCTATCTATCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E423266" ref_strand="+" ref_description="SGN-E423266 [STM-41-D12]">
      <seq>aacaacattcatgattctattccatatcagcttccacccaatctcactagcctgaatcttgcaaacaacaatataagtggcaacattccgtattcctttgctggcatggttacacttagctatctgaatcttagccataactcactctctcaaacaattggagaattgttcaccaatcactccgatctgggagctttggatctgtcctcgaataatttttctggagatctcccctcttcattcagttcgttaaaaaaagaagaagcttttttgcatcccaatttgaggtacataattcactgacaatgtcctccagagtatattttcaaaccatcttgggctactggatataatttattgtcaataagaacattgctacacattatcaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="+" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="140094" stop="146615"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="140394" g_stop="140446" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="53" r_length="53" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="140447" i_stop="140537" i_length="91">
            <donor d_prob="0.959" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="140538" g_stop="140609" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="54" r_stop="125" r_length="72" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="140610" i_stop="140721" i_length="112">
            <donor d_prob="0.879" d_score="1.00"/>
            <acceptor a_prob="0.800" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="140722" g_stop="140793" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="126" r_stop="197" r_length="72" r_score="0.931"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="140794" i_stop="141399" i_length="606">
            <donor d_prob="0.998" d_score="0.90"/>
            <acceptor a_prob="0.991" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="141400" g_stop="141453" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="198" r_stop="251" r_length="54" r_score="0.981"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="141454" i_stop="146178" i_length="4725">
            <donor d_prob="0.000" d_score="0.98"/>
            <acceptor a_prob="0.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="146179" g_stop="146311" g_length="133"/>
          <reference_exon_boundary r_type="cDNA" r_start="252" r_stop="384" r_length="133" r_score="0.962"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="388" polyA_stop="397"/>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="+" ref_id="SGN-E423266" ref_strand="+">
        <total_alignment_score>0.971</total_alignment_score>
        <cumulative_length_of_scored_exons>384</cumulative_length_of_scored_exons>
        <coverage percentage="0.967" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E423266" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="140394" e_stop="140446"/>
          <exon e_start="140538" e_stop="140609"/>
          <exon e_start="140722" e_stop="140793"/>
          <exon e_start="141400" e_stop="141453"/>
          <exon e_start="146179" e_stop="146311"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACAACATTCATGATTCTATTCCATATCAGCTTCCACCCAATCTCACTAGCCTGTAATGTTGACTCCTTGCTATGTGTTTGGTTTGTTTGAAAACGTCCTGGTTTATGATTGTCCCACTGGAACTATAATCATTGTCAATGCAGGAATCTTGCAAACAACAATATAAGTGGCAACATTCCGTATTCCTTTGCTGGCATGGTTACACTTAGCTATCTGTGAGTGACCAGTCTCACCAGGCACTTTCCAAAACAAAAATAACATTTGCTTGGTTTTCTCTTTATTCTATTGAATCATTTCAGGCAACTATTTAAAATAGCTTTTTTTCAGGAATCTTAGCCATAACTCACTCTCTCAAACAATTGGAGAATTGTTCAGCAACCACTCTGATCTGGGAACCTTGTAAGTGTTCTACTTAATTTTTACTTGATTGATCCTTTCTGGTAATTTTTTTTCCTTTTCTTCTTTTTCTCTAAAAGAGTTCAATACATTGCCACACTTGAAGGACTTCTTTTCTACACCAGTCCAATTCCAGTTACTAGCTTGAATTCTTAGCACCATGGTGTCTCCGACCCACAGTACACGGCCCTTCATTTGTTTTGAAGTGCCTGCAATGTACAGACACGACTGCTTCCAAATATGTTCTCAAAACAAATATAGGATCTAATCATATTCAAATGCCTCTTAGAATCATTATCTGCTTAATTTCAATGAACAATGAAGTCTGGAGGCTTGTAAAGTCCAACATTTTATTTCCCTTCGTAGCCTTTTTATGTGGGAATTCGTTTTGATTGTATTAGGATAGGTGCCCTGCTCCTCTTTGAAGCTTTCAGTTGCCTTTTGTTTTCATTTGTTGGTTCTTTCAGAATCCCATTTAAGTAAACCTACATTAGAGCTCAGTATCCCTGCTACAAAGAGCTTTCTGGCTATATTGATTCCTCATGTCCTTACAACATCTGTTTCACTATCTAATAGTTATAATTTTTCACTGATTTGCTGCTACTGCAGGGATCTGTCCTCAAATAATTTTTCTGGAGATCTCCCCTCTTCATTCAGTTCGTTGACAAATCTTTCCACACTGTAAGCATAATAATTTTCTACTAATAGGATTTGTTATTCCGTTACTTGACTTGCCCATGAAATTGGCATCTCTTGTAGTCATCTGGAAAACAATCAGCTAAGTGGCCCTCTCAATATCCTGATTGATCTACCTTTGACTAATTTGTAAGTTTCAATACCTCTTCTTGAATTGATGGGCTTAGCTAGTTTTATTCAATGCCAGTAGAGTGTTTTATGGGCAAAAAAAAACCTTTTTGCAGAAATGTTGCAAAGAATCATTTTAATGGATGGATCCCAAATGAGCTCCTATCTATCCCCAACTTCATGTAAGTGATTTCACATCCTATATATTCTTACATGGTTTAGAATGTTACGGTTTCAAAGGGTGTGACATAACATCTAACATGACAGATACGATGGGAATTCCTTTGCAAATGGTCCAGCTCCTCCCCCACCACCATACACTGCACCTCCTCCTGGAAGATCTCGCCACAACCGTAGCCATTCTCCTCCTAGTTCACGTACAAGACCAGGTTCTGATGGCCCCCCATCTCCAGAAAATGGTGATAAAAAGAAGGGATTGACAACTGGAGCTATCGTTGGCATAGCTCTTGGATCTTCTCTTGCAATTCTTTTTGCTCTGGTAGCACTTGTATTTTGCTTCCGGAGGGGCAAGGGCAAGGAAATTGCTACAAGACCCTCTACAGGAAGTCTTCCAGTTGGCACAGATAAAGGTGTGTTCCCTTAACTTGGTCCCTTCCTGACACAATATTGTCATTGGTGCTAATACCCTCAGATGACTAATAGTTGTGTTGTGATGTGCCATCTTAGTTTGGAAATTGGTACGAACTTCGCTGATTTCTCATGTATTTCTGCTTAATCTTAGTGAATATGGAGGTACAAGAGCAAAGGGCGAAGCCTGTGGTTGCTGTTGCTGACTTGAAGCCCCCACCTACCGAAAAGGTGACTGTTGAAATGATACAAGGAAAGAATGGATCTGTCAGGAGAGTGAAGTCTCCAATAACTGCATCTGCTTATACTGTTGCTGCATTGCAAACAGCAACAAACAGCTTCAGTCAAGAAAATCTCATTGGTGAAGGATCTCTTGGGCGTGTTTATAGGGCAGAGTTTCCTAATGGGAAGGTAATTTCAGACGTTTAATGTTGTCACTCTTACGTTTCCTACTCGTGATGTGCATTCAAAACTATTTGAAGCTGAACAATATTGAATAAATTCAATCGGTCTCTCATGGACGTCTTTCATTTTTGATGCTTTGGAGAAACACATACTTGTGAGTTATATAATGTTCATCAGATACATAAGGACATCAAAAGGGATATATAAAGATGTTGGCCACTCCACCTATCACCCTGTTGCTAAGATGCTTTAACATAGAATCAAGCCGTTACACGTGTGGGACAATGTTGCATTACCTAATGTCCAACCTCGGGCAAATGAGGCTGTAATGATATGGTACCCGACCATAACTCAACCCCAAAAGTTAACTCATGAGGGGAGGATTGCTCAAGTCCGTATAAGGAGACCCATCAGCCTATTCCCCAACCAATGTGGGACTTTACCCTCTACCGGGAGCCCAAATGGAGATGTGGTCCAATCAGAGATGGACCTGGCAAAGATATGGCACCAGGGTCTAACTCAATCCCAAAAGCTTAGCTCATGAGGGGATGATTGCCCAAGTCCATATATGGAGACCACTAGTCCATTCCTCAACCAATGTGAGACTTTTACCCACTCTAACAAAGGCATCCAAAGTAGAATATAAGGTTCTTGTCCTACTTTATCCATTGCCTTAACGTTATGGTTGAACCCTTAGATTCTTTCACAATATCTGTCAAACCGGGCAAACACTAAAAGGGTACATACTTGATCTATGTGTTACTAAACCTGAGTAGATGTTAGTAGACTTCTTGATACTCTGTTCGCATGGGAGTTTAAGGATTGGGTCCTCTTGCTAGTACATAATCTGGTTTTGAGGTGATTTTTTTAACTGAGATTAAGTCCTTTATACTCTTTGATTGAACTTGCTCTTTTAGGTCTTTCGCAAAGTTGATTGCCCACAGTAGGACATTCTGATGAACACATGTCAATTGTTCACTCCTCTGGGTGGCCTGGTCACATCTTTGCTTTTATATGGATAGGTGTAATGATATGGTCACTTTGATGGTCATCTCACTTGTCTTCTCAGCCTGATTTAACTATGATACTATAACCTTGTCCTTTGGTTACATCATGCAATCCTAAGCAAAAATATTCTTAGTAGTTTCAAAGTCTGACATTATATATCTTCTACTTTGTGGTTTATTATTGGATGTGCTGCTGGTTATTTCTTTTTGAATGAACCAATTGTGTTGACTGTTTTTCTGCTCCAAACTTGATGCCAACTGTGTCCCAATAAATGATTTAAGAATTTCATATGTCAACAACATTTTTGATGAGGAAACTTTTAGTTTATTATTCATGTAGTTTCTAAGGAAGGTGCCAACTGAAAATCTGAATTGATCTTTTGAACTGTCCTTGCCAGATAATGGTCATAAAAAAGATCGACAGTGCAGCACTGTCGCTGCAGGAGGAAGATAACTTTCTCGAAGCTGTCTCAAATATGTCAAGGCTGAGACACCCAAACATTGTTCAATTGATAGGATATTGTGCTGAGCATGGACAGCGTCTTCTGGTTTATGACCATGTTGCAAATGGTAGCTTGCATGATATGCTGCACTTTGCTGATGAGAGGAGCGAATTGCTTACTTGGAATGCCCGGGTTAGAGTAGCACTTGGCACTGCTCGAGCTTTAGAGTATGTTATAGCTGTATAGTATTTTACTTGTCTTGCCCTTCTCTTGTTGAGTTAGCTTAAAACTTGAATGTCTTCTTTTCAGGTACTTGCATGAAGTCTGTCTACCTTCTGTTGTACATAGAAACTTCAAATCCGCAAATATTTTACTAGATGAAGAGCTCAATCCCCATTTATCAGATTGTGGGTTAGCAGCTTTGACTCCCAACACAGAACGCCAGGTGAGTGAGTAAAGAAGATTTAATCGACGTCGTTGTTTTAACGGAGGGCGTTAATAATTTTGGGTGGTAGTGATGCATATCATGTTTATGAGATGATGTCAATCAACTTACCTAGTACTGTAGTAGGAGCAATATTTATAAGCAACTATTTCTAGGTAGATCTTGACAGACTTAGTCATGAGACTGGCAATTCTGATTGTGGCAGCTTAGCATTGTTTTCTTATTCTTCTGGAGCAATCTTGTTAGGTGCTTAAACACTTGGATTACCACAGTGCACAAACTTTCAGGTGAATTATTTTTGTGAAAAGAGAACCTCCTTGTACAGAAGCTCGGGTGAAGGAAGCTAATGCGGGAAGGCTAATTGATTCTGTTATGGGCATTGCCTAAAATTGTTCTGAATGTTGACAGGTGTCATCTACACAGATGATTGGTTCATTCGGCTATAGCGCTCCTGAATTTGCTTTATCTGGAATATACACTGTAAAAAGTGACGTATATAGTTTTGGTGTGGTAATGTTGGAGTTGTTAACAGGAAGGAAGCCACTTGATAGGTAAACTAGATCTTCAATACATTGCTAGTTAACTTACACTATTGAATTCTTTTAATGACTTGATTCTTGTTAAAAATCATATAGTTCAAGGGTGAGATCAGAGCAGTCCCTTGTGAGATGGGCTACGCCTCAACTCCATGATATAGATGCCTTGTCAAAAATGGTTGATCCTGCACTAAATGGCATGTATCCTGCAAAGTCTTTGTCCCGTTTCGCTGATATTATTGCACTCTGTGTTCAGGTGAGCTTTACTTGCATGTTCTTTCATTTGGAGCGTAACAGTTGTTAACATGTGAAGCTTAAAAGATGAAACCACTTCTAAAATATCTTTGATGGAAGCGAAAGTCGATGATCATAGAAGATTTACACACTAAGGACCAAACTTGATGCTCAAACCCGTCAAATAAATGACACTACCAGTTTTTGCATTCTATATAAGTCCAAATTTAGGGGCATGGATAAATTGGGACTGCCTGCACTCTGAGTTTGCTCATGTCTCAGTGCTGAAGTGAATCAATGCGCTTCAGCAAATAGATGACCTTTCTTACACATGCTCGGTGAGTCTTGGTATGGCGAGAGCACCGATCTTGATTAAGTTAGTTTGGGAACTTCCGGCGCAAGTCCTTGCACACTATGGTCCAGAATGGCTTTGGGTCTTGGTCTTTGAATGAGAGATTCTTAATCAAGCTATTCTTGATCTAAGACCCACGAAGAAAAATCTGATTGACTCAACAAAATTATAATGAATACTTGCTCATTGACGTATCTAAAGTAAATTACTTTACTTGCAATAATTTGAATGCGACTGTTTTCTCCTTGGTAACAACTTTTGACATCTATTTCCTGTACAGCCTGAACCAGAGTTTCGACCCCCAATGTCTGAAGTTGTGCAAGCACTGGTTCGGTTAATGCAAAGAGCAAGTGTGGTCAAAAGGCGATCCAGTGATGAATCAGCTTTCACATACAAGACTCCGGATCATGAGACGGTTGACATGCCATAGATAAAACATACACGACGAAGCAGCCTTTGCAATTTTGTAAGTAACTTCTGTGAAGGTCAAGAGTAACTGTGGCAGATGAAACTGGGAGGTGTCAATACCAGGGACATTAAATATGTAATTATTTTTCACATCTTCGTCGTTTAAAAAAAAAAAAGAAGCTTTTTTGCATCCCAATTTGAGGTACATAATTCACTGACAATGTCCTCCAGAGTATATTTACAAACCATCTTGGGATACTGGATACATTTTATTGTCAATAAGAACATTGCTACACATT</genome_strand>
        <mrna_strand>AACAACATTCATGATTCTATTCCATATCAGCTTCCACCCAATCTCACTAGCCT...........................................................................................GAATCTTGCAAACAACAATATAAGTGGCAACATTCCGTATTCCTTTGCTGGCATGGTTACACTTAGCTATCT................................................................................................................GAATCTTAGCCATAACTCACTCTCTCAAACAATTGGAGAATTGTTCACCAATCACTCCGATCTGGGAGCTTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATCTGTCCTCGAATAATTTTTCTGGAGATCTCCCCTCTTCATTCAGTTCGTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAGAAGAAGCTTTTTTGCATCCCAATTTGAGGTACATAATTCACTGACAATGTCCTCCAGAGTATATTTTCAAACCATCTTGGGCTACTGGATATAATTTATTGTCAATAAGAACATTGCTACACATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E450090" ref_strand="+" ref_description="SGN-E450090 [cSTS-8-I10]">
      <seq>aacaacattcatgattctattccatatcagcttccacccaatctcactagcctgaatcttgcaaacaacaatataagtggcaacattccgtattcctttgctggcatggttacacttagctatctgaatcttagccataactcactctctcaaacaattggagaattgttcaccaatcactccgatctgggagctttggatctgtcctcgaataatttttctggagatctcccctcttcattcagttcgttaaaaaaagaagaagcttttttgcatcccaatttgaggtacataattcactgacaatgtcctccagagtatattttcaaaccatcttgggctactggatataatttattgtcaataagaacattgctacacattatcaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="+" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="140094" stop="146615"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="140394" g_stop="140446" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="53" r_length="53" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="140447" i_stop="140537" i_length="91">
            <donor d_prob="0.959" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="140538" g_stop="140609" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="54" r_stop="125" r_length="72" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="140610" i_stop="140721" i_length="112">
            <donor d_prob="0.879" d_score="1.00"/>
            <acceptor a_prob="0.800" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="140722" g_stop="140793" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="126" r_stop="197" r_length="72" r_score="0.931"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="140794" i_stop="141399" i_length="606">
            <donor d_prob="0.998" d_score="0.90"/>
            <acceptor a_prob="0.991" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="141400" g_stop="141453" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="198" r_stop="251" r_length="54" r_score="0.981"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="141454" i_stop="146178" i_length="4725">
            <donor d_prob="0.000" d_score="0.98"/>
            <acceptor a_prob="0.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="146179" g_stop="146311" g_length="133"/>
          <reference_exon_boundary r_type="cDNA" r_start="252" r_stop="384" r_length="133" r_score="0.962"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="388" polyA_stop="397"/>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="+" ref_id="SGN-E450090" ref_strand="+">
        <total_alignment_score>0.971</total_alignment_score>
        <cumulative_length_of_scored_exons>384</cumulative_length_of_scored_exons>
        <coverage percentage="0.967" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E450090" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="140394" e_stop="140446"/>
          <exon e_start="140538" e_stop="140609"/>
          <exon e_start="140722" e_stop="140793"/>
          <exon e_start="141400" e_stop="141453"/>
          <exon e_start="146179" e_stop="146311"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACAACATTCATGATTCTATTCCATATCAGCTTCCACCCAATCTCACTAGCCTGTAATGTTGACTCCTTGCTATGTGTTTGGTTTGTTTGAAAACGTCCTGGTTTATGATTGTCCCACTGGAACTATAATCATTGTCAATGCAGGAATCTTGCAAACAACAATATAAGTGGCAACATTCCGTATTCCTTTGCTGGCATGGTTACACTTAGCTATCTGTGAGTGACCAGTCTCACCAGGCACTTTCCAAAACAAAAATAACATTTGCTTGGTTTTCTCTTTATTCTATTGAATCATTTCAGGCAACTATTTAAAATAGCTTTTTTTCAGGAATCTTAGCCATAACTCACTCTCTCAAACAATTGGAGAATTGTTCAGCAACCACTCTGATCTGGGAACCTTGTAAGTGTTCTACTTAATTTTTACTTGATTGATCCTTTCTGGTAATTTTTTTTCCTTTTCTTCTTTTTCTCTAAAAGAGTTCAATACATTGCCACACTTGAAGGACTTCTTTTCTACACCAGTCCAATTCCAGTTACTAGCTTGAATTCTTAGCACCATGGTGTCTCCGACCCACAGTACACGGCCCTTCATTTGTTTTGAAGTGCCTGCAATGTACAGACACGACTGCTTCCAAATATGTTCTCAAAACAAATATAGGATCTAATCATATTCAAATGCCTCTTAGAATCATTATCTGCTTAATTTCAATGAACAATGAAGTCTGGAGGCTTGTAAAGTCCAACATTTTATTTCCCTTCGTAGCCTTTTTATGTGGGAATTCGTTTTGATTGTATTAGGATAGGTGCCCTGCTCCTCTTTGAAGCTTTCAGTTGCCTTTTGTTTTCATTTGTTGGTTCTTTCAGAATCCCATTTAAGTAAACCTACATTAGAGCTCAGTATCCCTGCTACAAAGAGCTTTCTGGCTATATTGATTCCTCATGTCCTTACAACATCTGTTTCACTATCTAATAGTTATAATTTTTCACTGATTTGCTGCTACTGCAGGGATCTGTCCTCAAATAATTTTTCTGGAGATCTCCCCTCTTCATTCAGTTCGTTGACAAATCTTTCCACACTGTAAGCATAATAATTTTCTACTAATAGGATTTGTTATTCCGTTACTTGACTTGCCCATGAAATTGGCATCTCTTGTAGTCATCTGGAAAACAATCAGCTAAGTGGCCCTCTCAATATCCTGATTGATCTACCTTTGACTAATTTGTAAGTTTCAATACCTCTTCTTGAATTGATGGGCTTAGCTAGTTTTATTCAATGCCAGTAGAGTGTTTTATGGGCAAAAAAAAACCTTTTTGCAGAAATGTTGCAAAGAATCATTTTAATGGATGGATCCCAAATGAGCTCCTATCTATCCCCAACTTCATGTAAGTGATTTCACATCCTATATATTCTTACATGGTTTAGAATGTTACGGTTTCAAAGGGTGTGACATAACATCTAACATGACAGATACGATGGGAATTCCTTTGCAAATGGTCCAGCTCCTCCCCCACCACCATACACTGCACCTCCTCCTGGAAGATCTCGCCACAACCGTAGCCATTCTCCTCCTAGTTCACGTACAAGACCAGGTTCTGATGGCCCCCCATCTCCAGAAAATGGTGATAAAAAGAAGGGATTGACAACTGGAGCTATCGTTGGCATAGCTCTTGGATCTTCTCTTGCAATTCTTTTTGCTCTGGTAGCACTTGTATTTTGCTTCCGGAGGGGCAAGGGCAAGGAAATTGCTACAAGACCCTCTACAGGAAGTCTTCCAGTTGGCACAGATAAAGGTGTGTTCCCTTAACTTGGTCCCTTCCTGACACAATATTGTCATTGGTGCTAATACCCTCAGATGACTAATAGTTGTGTTGTGATGTGCCATCTTAGTTTGGAAATTGGTACGAACTTCGCTGATTTCTCATGTATTTCTGCTTAATCTTAGTGAATATGGAGGTACAAGAGCAAAGGGCGAAGCCTGTGGTTGCTGTTGCTGACTTGAAGCCCCCACCTACCGAAAAGGTGACTGTTGAAATGATACAAGGAAAGAATGGATCTGTCAGGAGAGTGAAGTCTCCAATAACTGCATCTGCTTATACTGTTGCTGCATTGCAAACAGCAACAAACAGCTTCAGTCAAGAAAATCTCATTGGTGAAGGATCTCTTGGGCGTGTTTATAGGGCAGAGTTTCCTAATGGGAAGGTAATTTCAGACGTTTAATGTTGTCACTCTTACGTTTCCTACTCGTGATGTGCATTCAAAACTATTTGAAGCTGAACAATATTGAATAAATTCAATCGGTCTCTCATGGACGTCTTTCATTTTTGATGCTTTGGAGAAACACATACTTGTGAGTTATATAATGTTCATCAGATACATAAGGACATCAAAAGGGATATATAAAGATGTTGGCCACTCCACCTATCACCCTGTTGCTAAGATGCTTTAACATAGAATCAAGCCGTTACACGTGTGGGACAATGTTGCATTACCTAATGTCCAACCTCGGGCAAATGAGGCTGTAATGATATGGTACCCGACCATAACTCAACCCCAAAAGTTAACTCATGAGGGGAGGATTGCTCAAGTCCGTATAAGGAGACCCATCAGCCTATTCCCCAACCAATGTGGGACTTTACCCTCTACCGGGAGCCCAAATGGAGATGTGGTCCAATCAGAGATGGACCTGGCAAAGATATGGCACCAGGGTCTAACTCAATCCCAAAAGCTTAGCTCATGAGGGGATGATTGCCCAAGTCCATATATGGAGACCACTAGTCCATTCCTCAACCAATGTGAGACTTTTACCCACTCTAACAAAGGCATCCAAAGTAGAATATAAGGTTCTTGTCCTACTTTATCCATTGCCTTAACGTTATGGTTGAACCCTTAGATTCTTTCACAATATCTGTCAAACCGGGCAAACACTAAAAGGGTACATACTTGATCTATGTGTTACTAAACCTGAGTAGATGTTAGTAGACTTCTTGATACTCTGTTCGCATGGGAGTTTAAGGATTGGGTCCTCTTGCTAGTACATAATCTGGTTTTGAGGTGATTTTTTTAACTGAGATTAAGTCCTTTATACTCTTTGATTGAACTTGCTCTTTTAGGTCTTTCGCAAAGTTGATTGCCCACAGTAGGACATTCTGATGAACACATGTCAATTGTTCACTCCTCTGGGTGGCCTGGTCACATCTTTGCTTTTATATGGATAGGTGTAATGATATGGTCACTTTGATGGTCATCTCACTTGTCTTCTCAGCCTGATTTAACTATGATACTATAACCTTGTCCTTTGGTTACATCATGCAATCCTAAGCAAAAATATTCTTAGTAGTTTCAAAGTCTGACATTATATATCTTCTACTTTGTGGTTTATTATTGGATGTGCTGCTGGTTATTTCTTTTTGAATGAACCAATTGTGTTGACTGTTTTTCTGCTCCAAACTTGATGCCAACTGTGTCCCAATAAATGATTTAAGAATTTCATATGTCAACAACATTTTTGATGAGGAAACTTTTAGTTTATTATTCATGTAGTTTCTAAGGAAGGTGCCAACTGAAAATCTGAATTGATCTTTTGAACTGTCCTTGCCAGATAATGGTCATAAAAAAGATCGACAGTGCAGCACTGTCGCTGCAGGAGGAAGATAACTTTCTCGAAGCTGTCTCAAATATGTCAAGGCTGAGACACCCAAACATTGTTCAATTGATAGGATATTGTGCTGAGCATGGACAGCGTCTTCTGGTTTATGACCATGTTGCAAATGGTAGCTTGCATGATATGCTGCACTTTGCTGATGAGAGGAGCGAATTGCTTACTTGGAATGCCCGGGTTAGAGTAGCACTTGGCACTGCTCGAGCTTTAGAGTATGTTATAGCTGTATAGTATTTTACTTGTCTTGCCCTTCTCTTGTTGAGTTAGCTTAAAACTTGAATGTCTTCTTTTCAGGTACTTGCATGAAGTCTGTCTACCTTCTGTTGTACATAGAAACTTCAAATCCGCAAATATTTTACTAGATGAAGAGCTCAATCCCCATTTATCAGATTGTGGGTTAGCAGCTTTGACTCCCAACACAGAACGCCAGGTGAGTGAGTAAAGAAGATTTAATCGACGTCGTTGTTTTAACGGAGGGCGTTAATAATTTTGGGTGGTAGTGATGCATATCATGTTTATGAGATGATGTCAATCAACTTACCTAGTACTGTAGTAGGAGCAATATTTATAAGCAACTATTTCTAGGTAGATCTTGACAGACTTAGTCATGAGACTGGCAATTCTGATTGTGGCAGCTTAGCATTGTTTTCTTATTCTTCTGGAGCAATCTTGTTAGGTGCTTAAACACTTGGATTACCACAGTGCACAAACTTTCAGGTGAATTATTTTTGTGAAAAGAGAACCTCCTTGTACAGAAGCTCGGGTGAAGGAAGCTAATGCGGGAAGGCTAATTGATTCTGTTATGGGCATTGCCTAAAATTGTTCTGAATGTTGACAGGTGTCATCTACACAGATGATTGGTTCATTCGGCTATAGCGCTCCTGAATTTGCTTTATCTGGAATATACACTGTAAAAAGTGACGTATATAGTTTTGGTGTGGTAATGTTGGAGTTGTTAACAGGAAGGAAGCCACTTGATAGGTAAACTAGATCTTCAATACATTGCTAGTTAACTTACACTATTGAATTCTTTTAATGACTTGATTCTTGTTAAAAATCATATAGTTCAAGGGTGAGATCAGAGCAGTCCCTTGTGAGATGGGCTACGCCTCAACTCCATGATATAGATGCCTTGTCAAAAATGGTTGATCCTGCACTAAATGGCATGTATCCTGCAAAGTCTTTGTCCCGTTTCGCTGATATTATTGCACTCTGTGTTCAGGTGAGCTTTACTTGCATGTTCTTTCATTTGGAGCGTAACAGTTGTTAACATGTGAAGCTTAAAAGATGAAACCACTTCTAAAATATCTTTGATGGAAGCGAAAGTCGATGATCATAGAAGATTTACACACTAAGGACCAAACTTGATGCTCAAACCCGTCAAATAAATGACACTACCAGTTTTTGCATTCTATATAAGTCCAAATTTAGGGGCATGGATAAATTGGGACTGCCTGCACTCTGAGTTTGCTCATGTCTCAGTGCTGAAGTGAATCAATGCGCTTCAGCAAATAGATGACCTTTCTTACACATGCTCGGTGAGTCTTGGTATGGCGAGAGCACCGATCTTGATTAAGTTAGTTTGGGAACTTCCGGCGCAAGTCCTTGCACACTATGGTCCAGAATGGCTTTGGGTCTTGGTCTTTGAATGAGAGATTCTTAATCAAGCTATTCTTGATCTAAGACCCACGAAGAAAAATCTGATTGACTCAACAAAATTATAATGAATACTTGCTCATTGACGTATCTAAAGTAAATTACTTTACTTGCAATAATTTGAATGCGACTGTTTTCTCCTTGGTAACAACTTTTGACATCTATTTCCTGTACAGCCTGAACCAGAGTTTCGACCCCCAATGTCTGAAGTTGTGCAAGCACTGGTTCGGTTAATGCAAAGAGCAAGTGTGGTCAAAAGGCGATCCAGTGATGAATCAGCTTTCACATACAAGACTCCGGATCATGAGACGGTTGACATGCCATAGATAAAACATACACGACGAAGCAGCCTTTGCAATTTTGTAAGTAACTTCTGTGAAGGTCAAGAGTAACTGTGGCAGATGAAACTGGGAGGTGTCAATACCAGGGACATTAAATATGTAATTATTTTTCACATCTTCGTCGTTTAAAAAAAAAAAAGAAGCTTTTTTGCATCCCAATTTGAGGTACATAATTCACTGACAATGTCCTCCAGAGTATATTTACAAACCATCTTGGGATACTGGATACATTTTATTGTCAATAAGAACATTGCTACACATT</genome_strand>
        <mrna_strand>AACAACATTCATGATTCTATTCCATATCAGCTTCCACCCAATCTCACTAGCCT...........................................................................................GAATCTTGCAAACAACAATATAAGTGGCAACATTCCGTATTCCTTTGCTGGCATGGTTACACTTAGCTATCT................................................................................................................GAATCTTAGCCATAACTCACTCTCTCAAACAATTGGAGAATTGTTCACCAATCACTCCGATCTGGGAGCTTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATCTGTCCTCGAATAATTTTTCTGGAGATCTCCCCTCTTCATTCAGTTCGTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAGAAGAAGCTTTTTTGCATCCCAATTTGAGGTACATAATTCACTGACAATGTCCTCCAGAGTATATTTTCAAACCATCTTGGGCTACTGGATATAATTTATTGTCAATAAGAACATTGCTACACATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E423267" ref_strand="-" ref_description="SGN-E423267 [STM-41-D12]">
      <seq>aacaacattcatgattctattccatatcagcttccacccaatctcactagcctgaatcttgcaaacaacaatataagtggcaacattccgtattcctttgctggcatggttacacttagctatctgaatcttagccataactcactctctcaaacaattggagaattgttcaccaatcactccgatctgggagctttggatctgtcctcgaataatttttctggagatctcccctcttcattcagttcgttaaaaaaagaagaagcttttttgcatcccaatttgaggtacataattcactgacaatgtactccagagtatatttcaaaccatcttgggctactggatgaaattatgtcaata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="+" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="140094" stop="146585"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="140394" g_stop="140446" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="53" r_length="53" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="140447" i_stop="140537" i_length="91">
            <donor d_prob="0.959" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="140538" g_stop="140609" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="54" r_stop="125" r_length="72" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="140610" i_stop="140721" i_length="112">
            <donor d_prob="0.879" d_score="1.00"/>
            <acceptor a_prob="0.800" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="140722" g_stop="140793" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="126" r_stop="197" r_length="72" r_score="0.931"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="140794" i_stop="141399" i_length="606">
            <donor d_prob="0.998" d_score="0.90"/>
            <acceptor a_prob="0.991" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="141400" g_stop="141453" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="198" r_stop="251" r_length="54" r_score="0.981"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="141454" i_stop="146178" i_length="4725">
            <donor d_prob="0.000" d_score="0.98"/>
            <acceptor a_prob="0.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="146179" g_stop="146293" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="252" r_stop="363" r_length="112" r_score="0.922"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="+" ref_id="SGN-E423267" ref_strand="-">
        <total_alignment_score>0.959</total_alignment_score>
        <cumulative_length_of_scored_exons>366</cumulative_length_of_scored_exons>
        <coverage percentage="1.008" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E423267" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="140394" e_stop="140446"/>
          <exon e_start="140538" e_stop="140609"/>
          <exon e_start="140722" e_stop="140793"/>
          <exon e_start="141400" e_stop="141453"/>
          <exon e_start="146179" e_stop="146293"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACAACATTCATGATTCTATTCCATATCAGCTTCCACCCAATCTCACTAGCCTGTAATGTTGACTCCTTGCTATGTGTTTGGTTTGTTTGAAAACGTCCTGGTTTATGATTGTCCCACTGGAACTATAATCATTGTCAATGCAGGAATCTTGCAAACAACAATATAAGTGGCAACATTCCGTATTCCTTTGCTGGCATGGTTACACTTAGCTATCTGTGAGTGACCAGTCTCACCAGGCACTTTCCAAAACAAAAATAACATTTGCTTGGTTTTCTCTTTATTCTATTGAATCATTTCAGGCAACTATTTAAAATAGCTTTTTTTCAGGAATCTTAGCCATAACTCACTCTCTCAAACAATTGGAGAATTGTTCAGCAACCACTCTGATCTGGGAACCTTGTAAGTGTTCTACTTAATTTTTACTTGATTGATCCTTTCTGGTAATTTTTTTTCCTTTTCTTCTTTTTCTCTAAAAGAGTTCAATACATTGCCACACTTGAAGGACTTCTTTTCTACACCAGTCCAATTCCAGTTACTAGCTTGAATTCTTAGCACCATGGTGTCTCCGACCCACAGTACACGGCCCTTCATTTGTTTTGAAGTGCCTGCAATGTACAGACACGACTGCTTCCAAATATGTTCTCAAAACAAATATAGGATCTAATCATATTCAAATGCCTCTTAGAATCATTATCTGCTTAATTTCAATGAACAATGAAGTCTGGAGGCTTGTAAAGTCCAACATTTTATTTCCCTTCGTAGCCTTTTTATGTGGGAATTCGTTTTGATTGTATTAGGATAGGTGCCCTGCTCCTCTTTGAAGCTTTCAGTTGCCTTTTGTTTTCATTTGTTGGTTCTTTCAGAATCCCATTTAAGTAAACCTACATTAGAGCTCAGTATCCCTGCTACAAAGAGCTTTCTGGCTATATTGATTCCTCATGTCCTTACAACATCTGTTTCACTATCTAATAGTTATAATTTTTCACTGATTTGCTGCTACTGCAGGGATCTGTCCTCAAATAATTTTTCTGGAGATCTCCCCTCTTCATTCAGTTCGTTGACAAATCTTTCCACACTGTAAGCATAATAATTTTCTACTAATAGGATTTGTTATTCCGTTACTTGACTTGCCCATGAAATTGGCATCTCTTGTAGTCATCTGGAAAACAATCAGCTAAGTGGCCCTCTCAATATCCTGATTGATCTACCTTTGACTAATTTGTAAGTTTCAATACCTCTTCTTGAATTGATGGGCTTAGCTAGTTTTATTCAATGCCAGTAGAGTGTTTTATGGGCAAAAAAAAACCTTTTTGCAGAAATGTTGCAAAGAATCATTTTAATGGATGGATCCCAAATGAGCTCCTATCTATCCCCAACTTCATGTAAGTGATTTCACATCCTATATATTCTTACATGGTTTAGAATGTTACGGTTTCAAAGGGTGTGACATAACATCTAACATGACAGATACGATGGGAATTCCTTTGCAAATGGTCCAGCTCCTCCCCCACCACCATACACTGCACCTCCTCCTGGAAGATCTCGCCACAACCGTAGCCATTCTCCTCCTAGTTCACGTACAAGACCAGGTTCTGATGGCCCCCCATCTCCAGAAAATGGTGATAAAAAGAAGGGATTGACAACTGGAGCTATCGTTGGCATAGCTCTTGGATCTTCTCTTGCAATTCTTTTTGCTCTGGTAGCACTTGTATTTTGCTTCCGGAGGGGCAAGGGCAAGGAAATTGCTACAAGACCCTCTACAGGAAGTCTTCCAGTTGGCACAGATAAAGGTGTGTTCCCTTAACTTGGTCCCTTCCTGACACAATATTGTCATTGGTGCTAATACCCTCAGATGACTAATAGTTGTGTTGTGATGTGCCATCTTAGTTTGGAAATTGGTACGAACTTCGCTGATTTCTCATGTATTTCTGCTTAATCTTAGTGAATATGGAGGTACAAGAGCAAAGGGCGAAGCCTGTGGTTGCTGTTGCTGACTTGAAGCCCCCACCTACCGAAAAGGTGACTGTTGAAATGATACAAGGAAAGAATGGATCTGTCAGGAGAGTGAAGTCTCCAATAACTGCATCTGCTTATACTGTTGCTGCATTGCAAACAGCAACAAACAGCTTCAGTCAAGAAAATCTCATTGGTGAAGGATCTCTTGGGCGTGTTTATAGGGCAGAGTTTCCTAATGGGAAGGTAATTTCAGACGTTTAATGTTGTCACTCTTACGTTTCCTACTCGTGATGTGCATTCAAAACTATTTGAAGCTGAACAATATTGAATAAATTCAATCGGTCTCTCATGGACGTCTTTCATTTTTGATGCTTTGGAGAAACACATACTTGTGAGTTATATAATGTTCATCAGATACATAAGGACATCAAAAGGGATATATAAAGATGTTGGCCACTCCACCTATCACCCTGTTGCTAAGATGCTTTAACATAGAATCAAGCCGTTACACGTGTGGGACAATGTTGCATTACCTAATGTCCAACCTCGGGCAAATGAGGCTGTAATGATATGGTACCCGACCATAACTCAACCCCAAAAGTTAACTCATGAGGGGAGGATTGCTCAAGTCCGTATAAGGAGACCCATCAGCCTATTCCCCAACCAATGTGGGACTTTACCCTCTACCGGGAGCCCAAATGGAGATGTGGTCCAATCAGAGATGGACCTGGCAAAGATATGGCACCAGGGTCTAACTCAATCCCAAAAGCTTAGCTCATGAGGGGATGATTGCCCAAGTCCATATATGGAGACCACTAGTCCATTCCTCAACCAATGTGAGACTTTTACCCACTCTAACAAAGGCATCCAAAGTAGAATATAAGGTTCTTGTCCTACTTTATCCATTGCCTTAACGTTATGGTTGAACCCTTAGATTCTTTCACAATATCTGTCAAACCGGGCAAACACTAAAAGGGTACATACTTGATCTATGTGTTACTAAACCTGAGTAGATGTTAGTAGACTTCTTGATACTCTGTTCGCATGGGAGTTTAAGGATTGGGTCCTCTTGCTAGTACATAATCTGGTTTTGAGGTGATTTTTTTAACTGAGATTAAGTCCTTTATACTCTTTGATTGAACTTGCTCTTTTAGGTCTTTCGCAAAGTTGATTGCCCACAGTAGGACATTCTGATGAACACATGTCAATTGTTCACTCCTCTGGGTGGCCTGGTCACATCTTTGCTTTTATATGGATAGGTGTAATGATATGGTCACTTTGATGGTCATCTCACTTGTCTTCTCAGCCTGATTTAACTATGATACTATAACCTTGTCCTTTGGTTACATCATGCAATCCTAAGCAAAAATATTCTTAGTAGTTTCAAAGTCTGACATTATATATCTTCTACTTTGTGGTTTATTATTGGATGTGCTGCTGGTTATTTCTTTTTGAATGAACCAATTGTGTTGACTGTTTTTCTGCTCCAAACTTGATGCCAACTGTGTCCCAATAAATGATTTAAGAATTTCATATGTCAACAACATTTTTGATGAGGAAACTTTTAGTTTATTATTCATGTAGTTTCTAAGGAAGGTGCCAACTGAAAATCTGAATTGATCTTTTGAACTGTCCTTGCCAGATAATGGTCATAAAAAAGATCGACAGTGCAGCACTGTCGCTGCAGGAGGAAGATAACTTTCTCGAAGCTGTCTCAAATATGTCAAGGCTGAGACACCCAAACATTGTTCAATTGATAGGATATTGTGCTGAGCATGGACAGCGTCTTCTGGTTTATGACCATGTTGCAAATGGTAGCTTGCATGATATGCTGCACTTTGCTGATGAGAGGAGCGAATTGCTTACTTGGAATGCCCGGGTTAGAGTAGCACTTGGCACTGCTCGAGCTTTAGAGTATGTTATAGCTGTATAGTATTTTACTTGTCTTGCCCTTCTCTTGTTGAGTTAGCTTAAAACTTGAATGTCTTCTTTTCAGGTACTTGCATGAAGTCTGTCTACCTTCTGTTGTACATAGAAACTTCAAATCCGCAAATATTTTACTAGATGAAGAGCTCAATCCCCATTTATCAGATTGTGGGTTAGCAGCTTTGACTCCCAACACAGAACGCCAGGTGAGTGAGTAAAGAAGATTTAATCGACGTCGTTGTTTTAACGGAGGGCGTTAATAATTTTGGGTGGTAGTGATGCATATCATGTTTATGAGATGATGTCAATCAACTTACCTAGTACTGTAGTAGGAGCAATATTTATAAGCAACTATTTCTAGGTAGATCTTGACAGACTTAGTCATGAGACTGGCAATTCTGATTGTGGCAGCTTAGCATTGTTTTCTTATTCTTCTGGAGCAATCTTGTTAGGTGCTTAAACACTTGGATTACCACAGTGCACAAACTTTCAGGTGAATTATTTTTGTGAAAAGAGAACCTCCTTGTACAGAAGCTCGGGTGAAGGAAGCTAATGCGGGAAGGCTAATTGATTCTGTTATGGGCATTGCCTAAAATTGTTCTGAATGTTGACAGGTGTCATCTACACAGATGATTGGTTCATTCGGCTATAGCGCTCCTGAATTTGCTTTATCTGGAATATACACTGTAAAAAGTGACGTATATAGTTTTGGTGTGGTAATGTTGGAGTTGTTAACAGGAAGGAAGCCACTTGATAGGTAAACTAGATCTTCAATACATTGCTAGTTAACTTACACTATTGAATTCTTTTAATGACTTGATTCTTGTTAAAAATCATATAGTTCAAGGGTGAGATCAGAGCAGTCCCTTGTGAGATGGGCTACGCCTCAACTCCATGATATAGATGCCTTGTCAAAAATGGTTGATCCTGCACTAAATGGCATGTATCCTGCAAAGTCTTTGTCCCGTTTCGCTGATATTATTGCACTCTGTGTTCAGGTGAGCTTTACTTGCATGTTCTTTCATTTGGAGCGTAACAGTTGTTAACATGTGAAGCTTAAAAGATGAAACCACTTCTAAAATATCTTTGATGGAAGCGAAAGTCGATGATCATAGAAGATTTACACACTAAGGACCAAACTTGATGCTCAAACCCGTCAAATAAATGACACTACCAGTTTTTGCATTCTATATAAGTCCAAATTTAGGGGCATGGATAAATTGGGACTGCCTGCACTCTGAGTTTGCTCATGTCTCAGTGCTGAAGTGAATCAATGCGCTTCAGCAAATAGATGACCTTTCTTACACATGCTCGGTGAGTCTTGGTATGGCGAGAGCACCGATCTTGATTAAGTTAGTTTGGGAACTTCCGGCGCAAGTCCTTGCACACTATGGTCCAGAATGGCTTTGGGTCTTGGTCTTTGAATGAGAGATTCTTAATCAAGCTATTCTTGATCTAAGACCCACGAAGAAAAATCTGATTGACTCAACAAAATTATAATGAATACTTGCTCATTGACGTATCTAAAGTAAATTACTTTACTTGCAATAATTTGAATGCGACTGTTTTCTCCTTGGTAACAACTTTTGACATCTATTTCCTGTACAGCCTGAACCAGAGTTTCGACCCCCAATGTCTGAAGTTGTGCAAGCACTGGTTCGGTTAATGCAAAGAGCAAGTGTGGTCAAAAGGCGATCCAGTGATGAATCAGCTTTCACATACAAGACTCCGGATCATGAGACGGTTGACATGCCATAGATAAAACATACACGACGAAGCAGCCTTTGCAATTTTGTAAGTAACTTCTGTGAAGGTCAAGAGTAACTGTGGCAGATGAAACTGGGAGGTGTCAATACCAGGGACATTAAATATGTAATTATTTTTCACATCTTCGTCGTTTAAAAAAAAAAAAGAAGCTTTTTTGCATCCCAATTTGAGGTACATAATTCACTGACAATGTCCTCCAGAGTATATTTACAAACCATCTTGGGATACTGGATACATTTTATTGTCAATA</genome_strand>
        <mrna_strand>AACAACATTCATGATTCTATTCCATATCAGCTTCCACCCAATCTCACTAGCCT...........................................................................................GAATCTTGCAAACAACAATATAAGTGGCAACATTCCGTATTCCTTTGCTGGCATGGTTACACTTAGCTATCT................................................................................................................GAATCTTAGCCATAACTCACTCTCTCAAACAATTGGAGAATTGTTCACCAATCACTCCGATCTGGGAGCTTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATCTGTCCTCGAATAATTTTTCTGGAGATCTCCCCTCTTCATTCAGTTCGTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAGAAGAAGCTTTTTTGCATCCCAATTTGAGGTACATAATTCACTGACAATGTACTCCAGAGTATATTT-CAAACCATCTTGGGCTACTGGAT-GAAATTA-TGTCAATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E448732" ref_strand="+" ref_description="SGN-E448732 [cSTS-4-E18]">
      <seq>cccaatctcactagcctgaatcttgcaaacaacaatataagtggcaacattccgtattcctttgctggcatggttacacttagctatctgaatcttagccataactcactctctcaaacaattggagaattgttcaccaaccactccgatctgggagccttggatctgtcctcgaataatttttctggagatctcccctcttcattcagttcgttgaccaatctttccacacttcatctggaaaacaatcagctaagtggccctctcaatatcctggttggtctacctttgactaatttaaatgttgcaaagaatcatttcaatggatggatcccgaatgagctccgatctatccctaacttcatatacgatgggaattcctttgcaaatggtccagctcctcctccaccaccatacactgcacctcctcctggaagatctcgcaacaatcgtagccattctcctcctagttcacgtgcaagaccaggttctgatggccagccatctccagaaaatggtgataaaaaaaaggggattgacactggagctatcattggcatagctcttggatcttctcttgcaattctttttgctctggtag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="+" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="140224" stop="142397"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="140430" g_stop="140446" g_length="17"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="17" r_length="17" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="140447" i_stop="140537" i_length="91">
            <donor d_prob="0.959" d_score="0.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="140538" g_stop="140609" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="18" r_stop="89" r_length="72" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="140610" i_stop="140721" i_length="112">
            <donor d_prob="0.879" d_score="1.00"/>
            <acceptor a_prob="0.800" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="140722" g_stop="140793" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="90" r_stop="161" r_length="72" r_score="0.958"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="140794" i_stop="141399" i_length="606">
            <donor d_prob="0.998" d_score="0.94"/>
            <acceptor a_prob="0.991" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="141400" g_stop="141471" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="162" r_stop="233" r_length="72" r_score="0.972"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="141472" i_stop="141549" i_length="78">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.927" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="141550" g_stop="141615" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="234" r_stop="299" r_length="66" r_score="0.970"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="141616" i_stop="141710" i_length="95">
            <donor d_prob="0.991" d_score="0.96"/>
            <acceptor a_prob="0.986" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="141711" g_stop="141776" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="300" r_stop="365" r_length="66" r_score="0.939"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="141777" i_stop="141861" i_length="85">
            <donor d_prob="0.998" d_score="0.92"/>
            <acceptor a_prob="0.930" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="141862" g_stop="142097" g_length="236"/>
          <reference_exon_boundary r_type="cDNA" r_start="366" r_stop="601" r_length="236" r_score="0.953"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="+" ref_id="SGN-E448732" ref_strand="+">
        <total_alignment_score>0.962</total_alignment_score>
        <cumulative_length_of_scored_exons>601</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E448732" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="140430" e_stop="140446"/>
          <exon e_start="140538" e_stop="140609"/>
          <exon e_start="140722" e_stop="140793"/>
          <exon e_start="141400" e_stop="141471"/>
          <exon e_start="141550" e_stop="141615"/>
          <exon e_start="141711" e_stop="141776"/>
          <exon e_start="141862" e_stop="142097"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCCAATCTCACTAGCCTGTAATGTTGACTCCTTGCTATGTGTTTGGTTTGTTTGAAAACGTCCTGGTTTATGATTGTCCCACTGGAACTATAATCATTGTCAATGCAGGAATCTTGCAAACAACAATATAAGTGGCAACATTCCGTATTCCTTTGCTGGCATGGTTACACTTAGCTATCTGTGAGTGACCAGTCTCACCAGGCACTTTCCAAAACAAAAATAACATTTGCTTGGTTTTCTCTTTATTCTATTGAATCATTTCAGGCAACTATTTAAAATAGCTTTTTTTCAGGAATCTTAGCCATAACTCACTCTCTCAAACAATTGGAGAATTGTTCAGCAACCACTCTGATCTGGGAACCTTGTAAGTGTTCTACTTAATTTTTACTTGATTGATCCTTTCTGGTAATTTTTTTTCCTTTTCTTCTTTTTCTCTAAAAGAGTTCAATACATTGCCACACTTGAAGGACTTCTTTTCTACACCAGTCCAATTCCAGTTACTAGCTTGAATTCTTAGCACCATGGTGTCTCCGACCCACAGTACACGGCCCTTCATTTGTTTTGAAGTGCCTGCAATGTACAGACACGACTGCTTCCAAATATGTTCTCAAAACAAATATAGGATCTAATCATATTCAAATGCCTCTTAGAATCATTATCTGCTTAATTTCAATGAACAATGAAGTCTGGAGGCTTGTAAAGTCCAACATTTTATTTCCCTTCGTAGCCTTTTTATGTGGGAATTCGTTTTGATTGTATTAGGATAGGTGCCCTGCTCCTCTTTGAAGCTTTCAGTTGCCTTTTGTTTTCATTTGTTGGTTCTTTCAGAATCCCATTTAAGTAAACCTACATTAGAGCTCAGTATCCCTGCTACAAAGAGCTTTCTGGCTATATTGATTCCTCATGTCCTTACAACATCTGTTTCACTATCTAATAGTTATAATTTTTCACTGATTTGCTGCTACTGCAGGGATCTGTCCTCAAATAATTTTTCTGGAGATCTCCCCTCTTCATTCAGTTCGTTGACAAATCTTTCCACACTGTAAGCATAATAATTTTCTACTAATAGGATTTGTTATTCCGTTACTTGACTTGCCCATGAAATTGGCATCTCTTGTAGTCATCTGGAAAACAATCAGCTAAGTGGCCCTCTCAATATCCTGATTGATCTACCTTTGACTAATTTGTAAGTTTCAATACCTCTTCTTGAATTGATGGGCTTAGCTAGTTTTATTCAATGCCAGTAGAGTGTTTTATGGGCAAAAAAAAACCTTTTTGCAGAAATGTTGCAAAGAATCATTTTAATGGATGGATCCCAAATGAGCTCCTATCTATCCCCAACTTCATGTAAGTGATTTCACATCCTATATATTCTTACATGGTTTAGAATGTTACGGTTTCAAAGGGTGTGACATAACATCTAACATGACAGATACGATGGGAATTCCTTTGCAAATGGTCCAGCTCCTCCCCCACCACCATACACTGCACCTCCTCCTGGAAGATCTCGCCACAACCGTAGCCATTCTCCTCCTAGTTCACGTACAAGACCAGGTTCTGATGGCCCCCCATCTCCAGAAAATGGTGATAAAAAGAA-GGGATTGACAACTGGAGCTATCGTTGGCATAGCTCTTGGATCTTCTCTTGCAATTCTTTTTGCTCTGGTAG</genome_strand>
        <mrna_strand>CCCAATCTCACTAGCCT...........................................................................................GAATCTTGCAAACAACAATATAAGTGGCAACATTCCGTATTCCTTTGCTGGCATGGTTACACTTAGCTATCT................................................................................................................GAATCTTAGCCATAACTCACTCTCTCAAACAATTGGAGAATTGTTCACCAACCACTCCGATCTGGGAGCCTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATCTGTCCTCGAATAATTTTTCTGGAGATCTCCCCTCTTCATTCAGTTCGTTGACCAATCTTTCCACACT..............................................................................TCATCTGGAAAACAATCAGCTAAGTGGCCCTCTCAATATCCTGGTTGGTCTACCTTTGACTAATTT...............................................................................................AAATGTTGCAAAGAATCATTTCAATGGATGGATCCCGAATGAGCTCCGATCTATCCCTAACTTCAT.....................................................................................ATACGATGGGAATTCCTTTGCAAATGGTCCAGCTCCTCCTCCACCACCATACACTGCACCTCCTCCTGGAAGATCTCGCAACAATCGTAGCCATTCTCCTCCTAGTTCACGTGCAAGACCAGGTTCTGATGGCCAGCCATCTCCAGAAAATGGTGATAAAAAAAAGGGGATTGAC-ACTGGAGCTATCATTGGCATAGCTCTTGGATCTTCTCTTGCAATTCTTTTTGCTCTGGTAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E709239" ref_strand="+" ref_description="SGN-E709239 [FA51AD11]">
      <seq>aatatcctgattgatctacctttgactaatttaaatgttgcaaagaatcattttaatggatggatcccaaatgagctcctatctatccccaacttcatatacgatgggaattcctttgcaaatggtccagctcctcccccaccaccatacactgcacctcctcctggaagatctcgccacaaccgtagccattctcctcctagttcacgtacaagaccaggttctgatggccccccatctccagaaaatggtgataaaaagaagggattgacaactggagctatcgttggcatagctcttggatcttctcttgcaattctttttgctctggtagcacttgtattttgcttccggaggggcaagggcaaggaaattgctacaagaccctctacaggaagtcttccagttggcacagataaagtgaatatggaggtacaagagcaaagggcgaagcctgtggttgctgttgctgacttgaagcccccacctaccgaaaaggtgactgttgaaatgatacaaggaaagaatggatctgtc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="+" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="141284" stop="142752"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="141584" g_stop="141615" g_length="32"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="32" r_length="32" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="141616" i_stop="141710" i_length="95">
            <donor d_prob="0.991" d_score="0.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="141711" g_stop="141776" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="33" r_stop="98" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="141777" i_stop="141861" i_length="85">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.930" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="141862" g_stop="142184" g_length="323"/>
          <reference_exon_boundary r_type="cDNA" r_start="99" r_stop="421" r_length="323" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="142185" i_stop="142336" i_length="152">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="142337" g_stop="142452" g_length="116"/>
          <reference_exon_boundary r_type="cDNA" r_start="422" r_stop="537" r_length="116" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="+" ref_id="SGN-E709239" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>537</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E709239" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="141584" e_stop="141615"/>
          <exon e_start="141711" e_stop="141776"/>
          <exon e_start="141862" e_stop="142184"/>
          <exon e_start="142337" e_stop="142452"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATATCCTGATTGATCTACCTTTGACTAATTTGTAAGTTTCAATACCTCTTCTTGAATTGATGGGCTTAGCTAGTTTTATTCAATGCCAGTAGAGTGTTTTATGGGCAAAAAAAAACCTTTTTGCAGAAATGTTGCAAAGAATCATTTTAATGGATGGATCCCAAATGAGCTCCTATCTATCCCCAACTTCATGTAAGTGATTTCACATCCTATATATTCTTACATGGTTTAGAATGTTACGGTTTCAAAGGGTGTGACATAACATCTAACATGACAGATACGATGGGAATTCCTTTGCAAATGGTCCAGCTCCTCCCCCACCACCATACACTGCACCTCCTCCTGGAAGATCTCGCCACAACCGTAGCCATTCTCCTCCTAGTTCACGTACAAGACCAGGTTCTGATGGCCCCCCATCTCCAGAAAATGGTGATAAAAAGAAGGGATTGACAACTGGAGCTATCGTTGGCATAGCTCTTGGATCTTCTCTTGCAATTCTTTTTGCTCTGGTAGCACTTGTATTTTGCTTCCGGAGGGGCAAGGGCAAGGAAATTGCTACAAGACCCTCTACAGGAAGTCTTCCAGTTGGCACAGATAAAGGTGTGTTCCCTTAACTTGGTCCCTTCCTGACACAATATTGTCATTGGTGCTAATACCCTCAGATGACTAATAGTTGTGTTGTGATGTGCCATCTTAGTTTGGAAATTGGTACGAACTTCGCTGATTTCTCATGTATTTCTGCTTAATCTTAGTGAATATGGAGGTACAAGAGCAAAGGGCGAAGCCTGTGGTTGCTGTTGCTGACTTGAAGCCCCCACCTACCGAAAAGGTGACTGTTGAAATGATACAAGGAAAGAATGGATCTGTC</genome_strand>
        <mrna_strand>AATATCCTGATTGATCTACCTTTGACTAATTT...............................................................................................AAATGTTGCAAAGAATCATTTTAATGGATGGATCCCAAATGAGCTCCTATCTATCCCCAACTTCAT.....................................................................................ATACGATGGGAATTCCTTTGCAAATGGTCCAGCTCCTCCCCCACCACCATACACTGCACCTCCTCCTGGAAGATCTCGCCACAACCGTAGCCATTCTCCTCCTAGTTCACGTACAAGACCAGGTTCTGATGGCCCCCCATCTCCAGAAAATGGTGATAAAAAGAAGGGATTGACAACTGGAGCTATCGTTGGCATAGCTCTTGGATCTTCTCTTGCAATTCTTTTTGCTCTGGTAGCACTTGTATTTTGCTTCCGGAGGGGCAAGGGCAAGGAAATTGCTACAAGACCCTCTACAGGAAGTCTTCCAGTTGGCACAGATAAAG........................................................................................................................................................TGAATATGGAGGTACAAGAGCAAAGGGCGAAGCCTGTGGTTGCTGTTGCTGACTTGAAGCCCCCACCTACCGAAAAGGTGACTGTTGAAATGATACAAGGAAAGAATGGATCTGTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E701349" ref_strand="+" ref_description="SGN-E701349 [FA15CH06]">
      <seq>tcctgattgatctacctttgactaatttaaatgttgcaaagaatcattttaatggatggatcccaaatgagctcctatctatccccaacttcatatacgatgggaattcctttgcaaatggtccagctcctcccccaccaccatacactgcacctcctcctggaagatctcgccacaaccgtagccattctcctcctagttcacgtacaagaccaggttctgatggccccccatctccagaaaatggtgataaaaagaagggattgacaactggagctatcgttggcatagctcttggatcttctcttgcaattctttttgctctggtagcacttgtattttgcttccggaggggcaagggcaaggaaattgctacaagaccctctacaggaagtcttccagttggcacagataaagtgaatatggaggtacaagagcaaagggcgaagcctgtggttgctgttgctgacttgaagcccccacctaccgaaaaggtgactgttgaaatgatacaaggaaagaatggatctgtcaggagagtgaagtctccaataactgcatctgcttatactgttgctgcattgcaaacagcaacaaacagcttcagtcaagaaaatctcattggtgaaggatctcttgggcgtgtttatagggcagagtttcctaatgggaagataatggtcataaaaaagatcgacagtgcagcactgtcgctgcaggaggaagataactttctcgaagctgtctcaaatatgtcaaggctgagacacccaaacattgtttcattgatangatattgtgctgagcatggacagcgtcttctggtttatgaccatgttgcaaatggtagcttgcatgatatgctgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="+" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="141288" stop="144485"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="141588" g_stop="141615" g_length="28"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="28" r_length="28" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="141616" i_stop="141710" i_length="95">
            <donor d_prob="0.991" d_score="0.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="141711" g_stop="141776" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="29" r_stop="94" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="141777" i_stop="141861" i_length="85">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.930" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="141862" g_stop="142184" g_length="323"/>
          <reference_exon_boundary r_type="cDNA" r_start="95" r_stop="417" r_length="323" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="142185" i_stop="142336" i_length="152">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="142337" g_stop="142593" g_length="257"/>
          <reference_exon_boundary r_type="cDNA" r_start="418" r_stop="674" r_length="257" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="142594" i_stop="143992" i_length="1399">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.809" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="143993" g_stop="144185" g_length="193"/>
          <reference_exon_boundary r_type="cDNA" r_start="675" r_stop="867" r_length="193" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="+" ref_id="SGN-E701349" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>867</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E701349" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="141588" e_stop="141615"/>
          <exon e_start="141711" e_stop="141776"/>
          <exon e_start="141862" e_stop="142184"/>
          <exon e_start="142337" e_stop="142593"/>
          <exon e_start="143993" e_stop="144185"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCTGATTGATCTACCTTTGACTAATTTGTAAGTTTCAATACCTCTTCTTGAATTGATGGGCTTAGCTAGTTTTATTCAATGCCAGTAGAGTGTTTTATGGGCAAAAAAAAACCTTTTTGCAGAAATGTTGCAAAGAATCATTTTAATGGATGGATCCCAAATGAGCTCCTATCTATCCCCAACTTCATGTAAGTGATTTCACATCCTATATATTCTTACATGGTTTAGAATGTTACGGTTTCAAAGGGTGTGACATAACATCTAACATGACAGATACGATGGGAATTCCTTTGCAAATGGTCCAGCTCCTCCCCCACCACCATACACTGCACCTCCTCCTGGAAGATCTCGCCACAACCGTAGCCATTCTCCTCCTAGTTCACGTACAAGACCAGGTTCTGATGGCCCCCCATCTCCAGAAAATGGTGATAAAAAGAAGGGATTGACAACTGGAGCTATCGTTGGCATAGCTCTTGGATCTTCTCTTGCAATTCTTTTTGCTCTGGTAGCACTTGTATTTTGCTTCCGGAGGGGCAAGGGCAAGGAAATTGCTACAAGACCCTCTACAGGAAGTCTTCCAGTTGGCACAGATAAAGGTGTGTTCCCTTAACTTGGTCCCTTCCTGACACAATATTGTCATTGGTGCTAATACCCTCAGATGACTAATAGTTGTGTTGTGATGTGCCATCTTAGTTTGGAAATTGGTACGAACTTCGCTGATTTCTCATGTATTTCTGCTTAATCTTAGTGAATATGGAGGTACAAGAGCAAAGGGCGAAGCCTGTGGTTGCTGTTGCTGACTTGAAGCCCCCACCTACCGAAAAGGTGACTGTTGAAATGATACAAGGAAAGAATGGATCTGTCAGGAGAGTGAAGTCTCCAATAACTGCATCTGCTTATACTGTTGCTGCATTGCAAACAGCAACAAACAGCTTCAGTCAAGAAAATCTCATTGGTGAAGGATCTCTTGGGCGTGTTTATAGGGCAGAGTTTCCTAATGGGAAGGTAATTTCAGACGTTTAATGTTGTCACTCTTACGTTTCCTACTCGTGATGTGCATTCAAAACTATTTGAAGCTGAACAATATTGAATAAATTCAATCGGTCTCTCATGGACGTCTTTCATTTTTGATGCTTTGGAGAAACACATACTTGTGAGTTATATAATGTTCATCAGATACATAAGGACATCAAAAGGGATATATAAAGATGTTGGCCACTCCACCTATCACCCTGTTGCTAAGATGCTTTAACATAGAATCAAGCCGTTACACGTGTGGGACAATGTTGCATTACCTAATGTCCAACCTCGGGCAAATGAGGCTGTAATGATATGGTACCCGACCATAACTCAACCCCAAAAGTTAACTCATGAGGGGAGGATTGCTCAAGTCCGTATAAGGAGACCCATCAGCCTATTCCCCAACCAATGTGGGACTTTACCCTCTACCGGGAGCCCAAATGGAGATGTGGTCCAATCAGAGATGGACCTGGCAAAGATATGGCACCAGGGTCTAACTCAATCCCAAAAGCTTAGCTCATGAGGGGATGATTGCCCAAGTCCATATATGGAGACCACTAGTCCATTCCTCAACCAATGTGAGACTTTTACCCACTCTAACAAAGGCATCCAAAGTAGAATATAAGGTTCTTGTCCTACTTTATCCATTGCCTTAACGTTATGGTTGAACCCTTAGATTCTTTCACAATATCTGTCAAACCGGGCAAACACTAAAAGGGTACATACTTGATCTATGTGTTACTAAACCTGAGTAGATGTTAGTAGACTTCTTGATACTCTGTTCGCATGGGAGTTTAAGGATTGGGTCCTCTTGCTAGTACATAATCTGGTTTTGAGGTGATTTTTTTAACTGAGATTAAGTCCTTTATACTCTTTGATTGAACTTGCTCTTTTAGGTCTTTCGCAAAGTTGATTGCCCACAGTAGGACATTCTGATGAACACATGTCAATTGTTCACTCCTCTGGGTGGCCTGGTCACATCTTTGCTTTTATATGGATAGGTGTAATGATATGGTCACTTTGATGGTCATCTCACTTGTCTTCTCAGCCTGATTTAACTATGATACTATAACCTTGTCCTTTGGTTACATCATGCAATCCTAAGCAAAAATATTCTTAGTAGTTTCAAAGTCTGACATTATATATCTTCTACTTTGTGGTTTATTATTGGATGTGCTGCTGGTTATTTCTTTTTGAATGAACCAATTGTGTTGACTGTTTTTCTGCTCCAAACTTGATGCCAACTGTGTCCCAATAAATGATTTAAGAATTTCATATGTCAACAACATTTTTGATGAGGAAACTTTTAGTTTATTATTCATGTAGTTTCTAAGGAAGGTGCCAACTGAAAATCTGAATTGATCTTTTGAACTGTCCTTGCCAGATAATGGTCATAAAAAAGATCGACAGTGCAGCACTGTCGCTGCAGGAGGAAGATAACTTTCTCGAAGCTGTCTCAAATATGTCAAGGCTGAGACACCCAAACATTGTTCAATTGATAGGATATTGTGCTGAGCATGGACAGCGTCTTCTGGTTTATGACCATGTTGCAAATGGTAGCTTGCATGATATGCTGC</genome_strand>
        <mrna_strand>TCCTGATTGATCTACCTTTGACTAATTT...............................................................................................AAATGTTGCAAAGAATCATTTTAATGGATGGATCCCAAATGAGCTCCTATCTATCCCCAACTTCAT.....................................................................................ATACGATGGGAATTCCTTTGCAAATGGTCCAGCTCCTCCCCCACCACCATACACTGCACCTCCTCCTGGAAGATCTCGCCACAACCGTAGCCATTCTCCTCCTAGTTCACGTACAAGACCAGGTTCTGATGGCCCCCCATCTCCAGAAAATGGTGATAAAAAGAAGGGATTGACAACTGGAGCTATCGTTGGCATAGCTCTTGGATCTTCTCTTGCAATTCTTTTTGCTCTGGTAGCACTTGTATTTTGCTTCCGGAGGGGCAAGGGCAAGGAAATTGCTACAAGACCCTCTACAGGAAGTCTTCCAGTTGGCACAGATAAAG........................................................................................................................................................TGAATATGGAGGTACAAGAGCAAAGGGCGAAGCCTGTGGTTGCTGTTGCTGACTTGAAGCCCCCACCTACCGAAAAGGTGACTGTTGAAATGATACAAGGAAAGAATGGATCTGTCAGGAGAGTGAAGTCTCCAATAACTGCATCTGCTTATACTGTTGCTGCATTGCAAACAGCAACAAACAGCTTCAGTCAAGAAAATCTCATTGGTGAAGGATCTCTTGGGCGTGTTTATAGGGCAGAGTTTCCTAATGGGAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAATGGTCATAAAAAAGATCGACAGTGCAGCACTGTCGCTGCAGGAGGAAGATAACTTTCTCGAAGCTGTCTCAAATATGTCAAGGCTGAGACACCCAAACATTGTTTCATTGATANGATATTGTGCTGAGCATGGACAGCGTCTTCTGGTTTATGACCATGTTGCAAATGGTAGCTTGCATGATATGCTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E207075" ref_strand="+" ref_description="SGN-E207075 [cLEC-30-H3]">
      <seq>caacttcatatacgatgggaattcctttgcaaatggtccagctcctcccccaccaccatacactgcacctcctcctggaagatctcgccacaaccgtagccattctcctcctagttcacgtacaagaccaggttctgatggccccccatctccagaaaatggtgataaaaagaagggattgacaactggagctatcgttggcatagctcttggatcttctcttgcaattctttttgctctggtagcacttgtattttgcttccggaggggcaagggcaaggaaattgctacaagaccctctacaggaagtcttccagttggcacagataaagtgaatatggaggtacaagagcaaagggcgaagcctgtggttgctgttgctgacttgaagcccccacctaccgaaaaggtgactgttgaaatgatacaaggaaagaatggatctgtcaggagagtgaagtctccaataactgcatctgcttatactggtgctgcattgcaaacagcaacaaacagcttcagtc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="+" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="141559" stop="142828"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="141768" g_stop="141776" g_length="9"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="9" r_length="9" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="141777" i_stop="141861" i_length="85">
            <donor d_prob="0.998" d_score="0.00"/>
            <acceptor a_prob="0.930" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="141862" g_stop="142184" g_length="323"/>
          <reference_exon_boundary r_type="cDNA" r_start="10" r_stop="332" r_length="323" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="142185" i_stop="142336" i_length="152">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="142337" g_stop="142528" g_length="192"/>
          <reference_exon_boundary r_type="cDNA" r_start="333" r_stop="524" r_length="192" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="+" ref_id="SGN-E207075" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>524</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E207075" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="141768" e_stop="141776"/>
          <exon e_start="141862" e_stop="142184"/>
          <exon e_start="142337" e_stop="142528"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAACTTCATGTAAGTGATTTCACATCCTATATATTCTTACATGGTTTAGAATGTTACGGTTTCAAAGGGTGTGACATAACATCTAACATGACAGATACGATGGGAATTCCTTTGCAAATGGTCCAGCTCCTCCCCCACCACCATACACTGCACCTCCTCCTGGAAGATCTCGCCACAACCGTAGCCATTCTCCTCCTAGTTCACGTACAAGACCAGGTTCTGATGGCCCCCCATCTCCAGAAAATGGTGATAAAAAGAAGGGATTGACAACTGGAGCTATCGTTGGCATAGCTCTTGGATCTTCTCTTGCAATTCTTTTTGCTCTGGTAGCACTTGTATTTTGCTTCCGGAGGGGCAAGGGCAAGGAAATTGCTACAAGACCCTCTACAGGAAGTCTTCCAGTTGGCACAGATAAAGGTGTGTTCCCTTAACTTGGTCCCTTCCTGACACAATATTGTCATTGGTGCTAATACCCTCAGATGACTAATAGTTGTGTTGTGATGTGCCATCTTAGTTTGGAAATTGGTACGAACTTCGCTGATTTCTCATGTATTTCTGCTTAATCTTAGTGAATATGGAGGTACAAGAGCAAAGGGCGAAGCCTGTGGTTGCTGTTGCTGACTTGAAGCCCCCACCTACCGAAAAGGTGACTGTTGAAATGATACAAGGAAAGAATGGATCTGTCAGGAGAGTGAAGTCTCCAATAACTGCATCTGCTTATACTGTTGCTGCATTGCAAACAGCAACAAACAGCTTCAGTC</genome_strand>
        <mrna_strand>CAACTTCAT.....................................................................................ATACGATGGGAATTCCTTTGCAAATGGTCCAGCTCCTCCCCCACCACCATACACTGCACCTCCTCCTGGAAGATCTCGCCACAACCGTAGCCATTCTCCTCCTAGTTCACGTACAAGACCAGGTTCTGATGGCCCCCCATCTCCAGAAAATGGTGATAAAAAGAAGGGATTGACAACTGGAGCTATCGTTGGCATAGCTCTTGGATCTTCTCTTGCAATTCTTTTTGCTCTGGTAGCACTTGTATTTTGCTTCCGGAGGGGCAAGGGCAAGGAAATTGCTACAAGACCCTCTACAGGAAGTCTTCCAGTTGGCACAGATAAAG........................................................................................................................................................TGAATATGGAGGTACAAGAGCAAAGGGCGAAGCCTGTGGTTGCTGTTGCTGACTTGAAGCCCCCACCTACCGAAAAGGTGACTGTTGAAATGATACAAGGAAAGAATGGATCTGTCAGGAGAGTGAAGTCTCCAATAACTGCATCTGCTTATACTGGTGCTGCATTGCAAACAGCAACAAACAGCTTCAGTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E574850" ref_strand="+" ref_description="SGN-E574850 [34382]">
      <seq>cccaccaccatacactgcacctcctcctggaacgatctcgtcaacaatcgtagccattctcctcctagttcacgtacaagaccaggttctgatggccagccatctccagaaaatggtgataaaaaaaagggattgacaactggagctatcattggcatagctcttggatcttctcttgcaattctttttgctctggtagcacttgtattttgcttccggaggggcaagggcacaggaaattgctacaagaccctctacaggaagtcttccagttggcacagataaagtgaatatggaggtacaagagcaaagggcgaatcctgtggctgctgttgctgactttgaagccccc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="+" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="141601" stop="142700"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="141901" g_stop="142184" g_length="284"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="287" r_length="287" r_score="0.958"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="142185" i_stop="142336" i_length="152">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="142337" g_stop="142400" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="288" r_stop="352" r_length="65" r_score="0.938"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="+" ref_id="SGN-E574850" ref_strand="+">
        <total_alignment_score>0.954</total_alignment_score>
        <cumulative_length_of_scored_exons>348</cumulative_length_of_scored_exons>
        <coverage percentage="0.989" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E574850" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="141901" e_stop="142184"/>
          <exon e_start="142337" e_stop="142400"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCCACCACCATACACTGCACCTCCTCCTGGAA-GATCTCG-CCACAACCGTAGCCATTCTCCTCCTAGTTCACGTACAAGACCAGGTTCTGATGGCCCCCCATCTCCAGAAAATGGTGATAAAAAGAAGGGATTGACAACTGGAGCTATCGTTGGCATAGCTCTTGGATCTTCTCTTGCAATTCTTTTTGCTCTGGTAGCACTTGTATTTTGCTTCCGGAGGGGCAAGGGCA-AGGAAATTGCTACAAGACCCTCTACAGGAAGTCTTCCAGTTGGCACAGATAAAGGTGTGTTCCCTTAACTTGGTCCCTTCCTGACACAATATTGTCATTGGTGCTAATACCCTCAGATGACTAATAGTTGTGTTGTGATGTGCCATCTTAGTTTGGAAATTGGTACGAACTTCGCTGATTTCTCATGTATTTCTGCTTAATCTTAGTGAATATGGAGGTACAAGAGCAAAGGGCGAAGCCTGTGGTTGCTGTTGCTGAC-TTGAAGCCCCC</genome_strand>
        <mrna_strand>CCCACCACCATACACTGCACCTCCTCCTGGAACGATCTCGTCAACAATCGTAGCCATTCTCCTCCTAGTTCACGTACAAGACCAGGTTCTGATGGCCAGCCATCTCCAGAAAATGGTGATAAAAAAAAGGGATTGACAACTGGAGCTATCATTGGCATAGCTCTTGGATCTTCTCTTGCAATTCTTTTTGCTCTGGTAGCACTTGTATTTTGCTTCCGGAGGGGCAAGGGCACAGGAAATTGCTACAAGACCCTCTACAGGAAGTCTTCCAGTTGGCACAGATAAAG........................................................................................................................................................TGAATATGGAGGTACAAGAGCAAAGGGCGAATCCTGTGGCTGCTGTTGCTGACTTTGAAGCCCCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E365487" ref_strand="+" ref_description="SGN-E365487 [cLPT-2-P5]">
      <seq>tctcctcctagttcacgtacaagaccaggttctgatggccccccatctgcagaaaatggtgataaaaagaagggattgacaactggagctatcgttggcatagctcttggatcttctcttgcaattctttttgctctggtagcacttgtattttgcttccggaggggcaagggcaaggaaattgctacaagaccctctacaggaagtcttccagttggcacagataaagtgaatatggaggtacaagagcaaagggcgaagcctgtggttgctgttgctgacttgaagcccccacctaccgaaaaggtgactgttgaaatgatacaaggaaagaatggatctgtcaggagagtgaagtctgcaataactgcatctgcttatactgttgctgcattgcaaacagcaacaaacagcttcagtcaagaaaatctcattggtgaaggatctcttgggcgtgtttatagggcagagtttcctaatgggaagataatggtcataaaaaagatcgacagtgcagcactgtcgctgcaggaggaagataactttctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="+" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="141656" stop="144354"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="141956" g_stop="142184" g_length="229"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="229" r_length="229" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="142185" i_stop="142336" i_length="152">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="142337" g_stop="142593" g_length="257"/>
          <reference_exon_boundary r_type="cDNA" r_start="230" r_stop="486" r_length="257" r_score="0.996"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="142594" i_stop="143992" i_length="1399">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.809" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="143993" g_stop="144055" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="487" r_stop="549" r_length="63" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="+" ref_id="SGN-E365487" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>549</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E365487" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="141956" e_stop="142184"/>
          <exon e_start="142337" e_stop="142593"/>
          <exon e_start="143993" e_stop="144055"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTCCTCCTAGTTCACGTACAAGACCAGGTTCTGATGGCCCCCCATCTCCAGAAAATGGTGATAAAAAGAAGGGATTGACAACTGGAGCTATCGTTGGCATAGCTCTTGGATCTTCTCTTGCAATTCTTTTTGCTCTGGTAGCACTTGTATTTTGCTTCCGGAGGGGCAAGGGCAAGGAAATTGCTACAAGACCCTCTACAGGAAGTCTTCCAGTTGGCACAGATAAAGGTGTGTTCCCTTAACTTGGTCCCTTCCTGACACAATATTGTCATTGGTGCTAATACCCTCAGATGACTAATAGTTGTGTTGTGATGTGCCATCTTAGTTTGGAAATTGGTACGAACTTCGCTGATTTCTCATGTATTTCTGCTTAATCTTAGTGAATATGGAGGTACAAGAGCAAAGGGCGAAGCCTGTGGTTGCTGTTGCTGACTTGAAGCCCCCACCTACCGAAAAGGTGACTGTTGAAATGATACAAGGAAAGAATGGATCTGTCAGGAGAGTGAAGTCTCCAATAACTGCATCTGCTTATACTGTTGCTGCATTGCAAACAGCAACAAACAGCTTCAGTCAAGAAAATCTCATTGGTGAAGGATCTCTTGGGCGTGTTTATAGGGCAGAGTTTCCTAATGGGAAGGTAATTTCAGACGTTTAATGTTGTCACTCTTACGTTTCCTACTCGTGATGTGCATTCAAAACTATTTGAAGCTGAACAATATTGAATAAATTCAATCGGTCTCTCATGGACGTCTTTCATTTTTGATGCTTTGGAGAAACACATACTTGTGAGTTATATAATGTTCATCAGATACATAAGGACATCAAAAGGGATATATAAAGATGTTGGCCACTCCACCTATCACCCTGTTGCTAAGATGCTTTAACATAGAATCAAGCCGTTACACGTGTGGGACAATGTTGCATTACCTAATGTCCAACCTCGGGCAAATGAGGCTGTAATGATATGGTACCCGACCATAACTCAACCCCAAAAGTTAACTCATGAGGGGAGGATTGCTCAAGTCCGTATAAGGAGACCCATCAGCCTATTCCCCAACCAATGTGGGACTTTACCCTCTACCGGGAGCCCAAATGGAGATGTGGTCCAATCAGAGATGGACCTGGCAAAGATATGGCACCAGGGTCTAACTCAATCCCAAAAGCTTAGCTCATGAGGGGATGATTGCCCAAGTCCATATATGGAGACCACTAGTCCATTCCTCAACCAATGTGAGACTTTTACCCACTCTAACAAAGGCATCCAAAGTAGAATATAAGGTTCTTGTCCTACTTTATCCATTGCCTTAACGTTATGGTTGAACCCTTAGATTCTTTCACAATATCTGTCAAACCGGGCAAACACTAAAAGGGTACATACTTGATCTATGTGTTACTAAACCTGAGTAGATGTTAGTAGACTTCTTGATACTCTGTTCGCATGGGAGTTTAAGGATTGGGTCCTCTTGCTAGTACATAATCTGGTTTTGAGGTGATTTTTTTAACTGAGATTAAGTCCTTTATACTCTTTGATTGAACTTGCTCTTTTAGGTCTTTCGCAAAGTTGATTGCCCACAGTAGGACATTCTGATGAACACATGTCAATTGTTCACTCCTCTGGGTGGCCTGGTCACATCTTTGCTTTTATATGGATAGGTGTAATGATATGGTCACTTTGATGGTCATCTCACTTGTCTTCTCAGCCTGATTTAACTATGATACTATAACCTTGTCCTTTGGTTACATCATGCAATCCTAAGCAAAAATATTCTTAGTAGTTTCAAAGTCTGACATTATATATCTTCTACTTTGTGGTTTATTATTGGATGTGCTGCTGGTTATTTCTTTTTGAATGAACCAATTGTGTTGACTGTTTTTCTGCTCCAAACTTGATGCCAACTGTGTCCCAATAAATGATTTAAGAATTTCATATGTCAACAACATTTTTGATGAGGAAACTTTTAGTTTATTATTCATGTAGTTTCTAAGGAAGGTGCCAACTGAAAATCTGAATTGATCTTTTGAACTGTCCTTGCCAGATAATGGTCATAAAAAAGATCGACAGTGCAGCACTGTCGCTGCAGGAGGAAGATAACTTTCTC</genome_strand>
        <mrna_strand>TCTCCTCCTAGTTCACGTACAAGACCAGGTTCTGATGGCCCCCCATCTGCAGAAAATGGTGATAAAAAGAAGGGATTGACAACTGGAGCTATCGTTGGCATAGCTCTTGGATCTTCTCTTGCAATTCTTTTTGCTCTGGTAGCACTTGTATTTTGCTTCCGGAGGGGCAAGGGCAAGGAAATTGCTACAAGACCCTCTACAGGAAGTCTTCCAGTTGGCACAGATAAAG........................................................................................................................................................TGAATATGGAGGTACAAGAGCAAAGGGCGAAGCCTGTGGTTGCTGTTGCTGACTTGAAGCCCCCACCTACCGAAAAGGTGACTGTTGAAATGATACAAGGAAAGAATGGATCTGTCAGGAGAGTGAAGTCTGCAATAACTGCATCTGCTTATACTGTTGCTGCATTGCAAACAGCAACAAACAGCTTCAGTCAAGAAAATCTCATTGGTGAAGGATCTCTTGGGCGTGTTTATAGGGCAGAGTTTCCTAATGGGAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAATGGTCATAAAAAAGATCGACAGTGCAGCACTGTCGCTGCAGGAGGAAGATAACTTTCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E259985" ref_strand="+" ref_description="SGN-E259985 [cLEG-51-B10]">
      <seq>acaactggagctatcgttggcatagctcttggatcttctcttgcaattctttttgctctggtagcacttgtattttgcttccggaggggcaagggcaaggaaattgctacaagaccctctacaggaagtcttccagttggcacagataaagtgaatatggaggtacaagagcaaagggcgaagcctgtggttgctgttgctgacttgaagcccccacctaccgaaaaggtgactgttgaaatgatacaaggaaagaatggatctgtcaggagagtgaagtctccaataactgcatctgcttatactgttgctgcattgcaaacagcaacaaacagcttcagtcaagaaaatctcattggtgaaggatctcttgggcgtgtttatagggcagagtttcctaatgggaagataatggtcataaaaaagatcgacagtgcagcactgtcgctgcaggaggaagataactttctcgaagctgtctcaaatatgtcaaggctgagacacccaaacattgttcaattgataggatattgtgctgagcatggacagcgtcttctggtttatgaccatgttgcaaatggtagcttgcatgatatgctgcactttgctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="+" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="141734" stop="144494"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="142034" g_stop="142184" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="151" r_length="151" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="142185" i_stop="142336" i_length="152">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="142337" g_stop="142593" g_length="257"/>
          <reference_exon_boundary r_type="cDNA" r_start="152" r_stop="408" r_length="257" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="142594" i_stop="143992" i_length="1399">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.809" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="143993" g_stop="144194" g_length="202"/>
          <reference_exon_boundary r_type="cDNA" r_start="409" r_stop="610" r_length="202" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="+" ref_id="SGN-E259985" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>610</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E259985" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="142034" e_stop="142184"/>
          <exon e_start="142337" e_stop="142593"/>
          <exon e_start="143993" e_stop="144194"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAACTGGAGCTATCGTTGGCATAGCTCTTGGATCTTCTCTTGCAATTCTTTTTGCTCTGGTAGCACTTGTATTTTGCTTCCGGAGGGGCAAGGGCAAGGAAATTGCTACAAGACCCTCTACAGGAAGTCTTCCAGTTGGCACAGATAAAGGTGTGTTCCCTTAACTTGGTCCCTTCCTGACACAATATTGTCATTGGTGCTAATACCCTCAGATGACTAATAGTTGTGTTGTGATGTGCCATCTTAGTTTGGAAATTGGTACGAACTTCGCTGATTTCTCATGTATTTCTGCTTAATCTTAGTGAATATGGAGGTACAAGAGCAAAGGGCGAAGCCTGTGGTTGCTGTTGCTGACTTGAAGCCCCCACCTACCGAAAAGGTGACTGTTGAAATGATACAAGGAAAGAATGGATCTGTCAGGAGAGTGAAGTCTCCAATAACTGCATCTGCTTATACTGTTGCTGCATTGCAAACAGCAACAAACAGCTTCAGTCAAGAAAATCTCATTGGTGAAGGATCTCTTGGGCGTGTTTATAGGGCAGAGTTTCCTAATGGGAAGGTAATTTCAGACGTTTAATGTTGTCACTCTTACGTTTCCTACTCGTGATGTGCATTCAAAACTATTTGAAGCTGAACAATATTGAATAAATTCAATCGGTCTCTCATGGACGTCTTTCATTTTTGATGCTTTGGAGAAACACATACTTGTGAGTTATATAATGTTCATCAGATACATAAGGACATCAAAAGGGATATATAAAGATGTTGGCCACTCCACCTATCACCCTGTTGCTAAGATGCTTTAACATAGAATCAAGCCGTTACACGTGTGGGACAATGTTGCATTACCTAATGTCCAACCTCGGGCAAATGAGGCTGTAATGATATGGTACCCGACCATAACTCAACCCCAAAAGTTAACTCATGAGGGGAGGATTGCTCAAGTCCGTATAAGGAGACCCATCAGCCTATTCCCCAACCAATGTGGGACTTTACCCTCTACCGGGAGCCCAAATGGAGATGTGGTCCAATCAGAGATGGACCTGGCAAAGATATGGCACCAGGGTCTAACTCAATCCCAAAAGCTTAGCTCATGAGGGGATGATTGCCCAAGTCCATATATGGAGACCACTAGTCCATTCCTCAACCAATGTGAGACTTTTACCCACTCTAACAAAGGCATCCAAAGTAGAATATAAGGTTCTTGTCCTACTTTATCCATTGCCTTAACGTTATGGTTGAACCCTTAGATTCTTTCACAATATCTGTCAAACCGGGCAAACACTAAAAGGGTACATACTTGATCTATGTGTTACTAAACCTGAGTAGATGTTAGTAGACTTCTTGATACTCTGTTCGCATGGGAGTTTAAGGATTGGGTCCTCTTGCTAGTACATAATCTGGTTTTGAGGTGATTTTTTTAACTGAGATTAAGTCCTTTATACTCTTTGATTGAACTTGCTCTTTTAGGTCTTTCGCAAAGTTGATTGCCCACAGTAGGACATTCTGATGAACACATGTCAATTGTTCACTCCTCTGGGTGGCCTGGTCACATCTTTGCTTTTATATGGATAGGTGTAATGATATGGTCACTTTGATGGTCATCTCACTTGTCTTCTCAGCCTGATTTAACTATGATACTATAACCTTGTCCTTTGGTTACATCATGCAATCCTAAGCAAAAATATTCTTAGTAGTTTCAAAGTCTGACATTATATATCTTCTACTTTGTGGTTTATTATTGGATGTGCTGCTGGTTATTTCTTTTTGAATGAACCAATTGTGTTGACTGTTTTTCTGCTCCAAACTTGATGCCAACTGTGTCCCAATAAATGATTTAAGAATTTCATATGTCAACAACATTTTTGATGAGGAAACTTTTAGTTTATTATTCATGTAGTTTCTAAGGAAGGTGCCAACTGAAAATCTGAATTGATCTTTTGAACTGTCCTTGCCAGATAATGGTCATAAAAAAGATCGACAGTGCAGCACTGTCGCTGCAGGAGGAAGATAACTTTCTCGAAGCTGTCTCAAATATGTCAAGGCTGAGACACCCAAACATTGTTCAATTGATAGGATATTGTGCTGAGCATGGACAGCGTCTTCTGGTTTATGACCATGTTGCAAATGGTAGCTTGCATGATATGCTGCACTTTGCTG</genome_strand>
        <mrna_strand>ACAACTGGAGCTATCGTTGGCATAGCTCTTGGATCTTCTCTTGCAATTCTTTTTGCTCTGGTAGCACTTGTATTTTGCTTCCGGAGGGGCAAGGGCAAGGAAATTGCTACAAGACCCTCTACAGGAAGTCTTCCAGTTGGCACAGATAAAG........................................................................................................................................................TGAATATGGAGGTACAAGAGCAAAGGGCGAAGCCTGTGGTTGCTGTTGCTGACTTGAAGCCCCCACCTACCGAAAAGGTGACTGTTGAAATGATACAAGGAAAGAATGGATCTGTCAGGAGAGTGAAGTCTCCAATAACTGCATCTGCTTATACTGTTGCTGCATTGCAAACAGCAACAAACAGCTTCAGTCAAGAAAATCTCATTGGTGAAGGATCTCTTGGGCGTGTTTATAGGGCAGAGTTTCCTAATGGGAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAATGGTCATAAAAAAGATCGACAGTGCAGCACTGTCGCTGCAGGAGGAAGATAACTTTCTCGAAGCTGTCTCAAATATGTCAAGGCTGAGACACCCAAACATTGTTCAATTGATAGGATATTGTGCTGAGCATGGACAGCGTCTTCTGGTTTATGACCATGTTGCAAATGGTAGCTTGCATGATATGCTGCACTTTGCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E260106" ref_strand="+" ref_description="SGN-E260106 [cLEG-52-A9]">
      <seq>aactggagctatcgttggcatagctcttggatcttctcttgcaattctttttgctctggtagcacttgtattttgcttccggaggggcaagggcaaggaaattgctacaagaccctctacaggaagtcttccagttggcacagataaagtgaatatggaggtacaagagcaaagggcgaagcctgtggttgctgttgctgacttgaagcccccacctaccgaaaaggtgactgttgaaatgatacaaggaaagaatggatctgtcaggagagtgaagtctccaataactgcatctgcttatactgttgctgcattgcaaacagcaacaaacagcttcagtcaagaaaatctcattggtgaaggatctcttgggcgtgtttataaggcagagtttcctaatgggaagataatggtcataaaaaagatcgacagtgcagcactgtccctgcaagaagaaaataactttct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="+" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="141736" stop="144354"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="142036" g_stop="142184" g_length="149"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="149" r_length="149" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="142185" i_stop="142336" i_length="152">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="142337" g_stop="142593" g_length="257"/>
          <reference_exon_boundary r_type="cDNA" r_start="150" r_stop="406" r_length="257" r_score="0.996"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="142594" i_stop="143992" i_length="1399">
            <donor d_prob="0.996" d_score="0.98"/>
            <acceptor a_prob="0.809" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="143993" g_stop="144054" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="407" r_stop="468" r_length="62" r_score="0.935"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="+" ref_id="SGN-E260106" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>468</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E260106" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="142036" e_stop="142184"/>
          <exon e_start="142337" e_stop="142593"/>
          <exon e_start="143993" e_stop="144054"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACTGGAGCTATCGTTGGCATAGCTCTTGGATCTTCTCTTGCAATTCTTTTTGCTCTGGTAGCACTTGTATTTTGCTTCCGGAGGGGCAAGGGCAAGGAAATTGCTACAAGACCCTCTACAGGAAGTCTTCCAGTTGGCACAGATAAAGGTGTGTTCCCTTAACTTGGTCCCTTCCTGACACAATATTGTCATTGGTGCTAATACCCTCAGATGACTAATAGTTGTGTTGTGATGTGCCATCTTAGTTTGGAAATTGGTACGAACTTCGCTGATTTCTCATGTATTTCTGCTTAATCTTAGTGAATATGGAGGTACAAGAGCAAAGGGCGAAGCCTGTGGTTGCTGTTGCTGACTTGAAGCCCCCACCTACCGAAAAGGTGACTGTTGAAATGATACAAGGAAAGAATGGATCTGTCAGGAGAGTGAAGTCTCCAATAACTGCATCTGCTTATACTGTTGCTGCATTGCAAACAGCAACAAACAGCTTCAGTCAAGAAAATCTCATTGGTGAAGGATCTCTTGGGCGTGTTTATAGGGCAGAGTTTCCTAATGGGAAGGTAATTTCAGACGTTTAATGTTGTCACTCTTACGTTTCCTACTCGTGATGTGCATTCAAAACTATTTGAAGCTGAACAATATTGAATAAATTCAATCGGTCTCTCATGGACGTCTTTCATTTTTGATGCTTTGGAGAAACACATACTTGTGAGTTATATAATGTTCATCAGATACATAAGGACATCAAAAGGGATATATAAAGATGTTGGCCACTCCACCTATCACCCTGTTGCTAAGATGCTTTAACATAGAATCAAGCCGTTACACGTGTGGGACAATGTTGCATTACCTAATGTCCAACCTCGGGCAAATGAGGCTGTAATGATATGGTACCCGACCATAACTCAACCCCAAAAGTTAACTCATGAGGGGAGGATTGCTCAAGTCCGTATAAGGAGACCCATCAGCCTATTCCCCAACCAATGTGGGACTTTACCCTCTACCGGGAGCCCAAATGGAGATGTGGTCCAATCAGAGATGGACCTGGCAAAGATATGGCACCAGGGTCTAACTCAATCCCAAAAGCTTAGCTCATGAGGGGATGATTGCCCAAGTCCATATATGGAGACCACTAGTCCATTCCTCAACCAATGTGAGACTTTTACCCACTCTAACAAAGGCATCCAAAGTAGAATATAAGGTTCTTGTCCTACTTTATCCATTGCCTTAACGTTATGGTTGAACCCTTAGATTCTTTCACAATATCTGTCAAACCGGGCAAACACTAAAAGGGTACATACTTGATCTATGTGTTACTAAACCTGAGTAGATGTTAGTAGACTTCTTGATACTCTGTTCGCATGGGAGTTTAAGGATTGGGTCCTCTTGCTAGTACATAATCTGGTTTTGAGGTGATTTTTTTAACTGAGATTAAGTCCTTTATACTCTTTGATTGAACTTGCTCTTTTAGGTCTTTCGCAAAGTTGATTGCCCACAGTAGGACATTCTGATGAACACATGTCAATTGTTCACTCCTCTGGGTGGCCTGGTCACATCTTTGCTTTTATATGGATAGGTGTAATGATATGGTCACTTTGATGGTCATCTCACTTGTCTTCTCAGCCTGATTTAACTATGATACTATAACCTTGTCCTTTGGTTACATCATGCAATCCTAAGCAAAAATATTCTTAGTAGTTTCAAAGTCTGACATTATATATCTTCTACTTTGTGGTTTATTATTGGATGTGCTGCTGGTTATTTCTTTTTGAATGAACCAATTGTGTTGACTGTTTTTCTGCTCCAAACTTGATGCCAACTGTGTCCCAATAAATGATTTAAGAATTTCATATGTCAACAACATTTTTGATGAGGAAACTTTTAGTTTATTATTCATGTAGTTTCTAAGGAAGGTGCCAACTGAAAATCTGAATTGATCTTTTGAACTGTCCTTGCCAGATAATGGTCATAAAAAAGATCGACAGTGCAGCACTGTCGCTGCAGGAGGAAGATAACTTTCT</genome_strand>
        <mrna_strand>AACTGGAGCTATCGTTGGCATAGCTCTTGGATCTTCTCTTGCAATTCTTTTTGCTCTGGTAGCACTTGTATTTTGCTTCCGGAGGGGCAAGGGCAAGGAAATTGCTACAAGACCCTCTACAGGAAGTCTTCCAGTTGGCACAGATAAAG........................................................................................................................................................TGAATATGGAGGTACAAGAGCAAAGGGCGAAGCCTGTGGTTGCTGTTGCTGACTTGAAGCCCCCACCTACCGAAAAGGTGACTGTTGAAATGATACAAGGAAAGAATGGATCTGTCAGGAGAGTGAAGTCTCCAATAACTGCATCTGCTTATACTGTTGCTGCATTGCAAACAGCAACAAACAGCTTCAGTCAAGAAAATCTCATTGGTGAAGGATCTCTTGGGCGTGTTTATAAGGCAGAGTTTCCTAATGGGAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAATGGTCATAAAAAAGATCGACAGTGCAGCACTGTCCCTGCAAGAAGAAAATAACTTTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E317418" ref_strand="+" ref_description="SGN-E317418 [cTOA-28-F21]">
      <seq>ttttgcttccggaggggcaagggcaaggaaattgctacaagaccctctacaggaagtcttccagttggcacagataaagtgaatatggaggtacaagagcaaagggcgaagcctgtggttgctgttgctgacttgaagcccccacctaccgaaaaggtgactgttgaaatgatacaaggaaagaatggatctgtcaggagagtgaagtctccaataactgcatctgcttatactgttgctgcattgcaaacagcaacaaacagcttcagtcaagaaaatctcattggtgaaggatctcttgggcgtgtttatagggcagagtttcctaatgggaagataatggtcataaaaaagatcgacagtgcagcactgtcgctgcaggaggaagataactttctcgaagctgtctcaaatatgtcaaggctgagacacccaaacattgttcaattgataggatattgtgctgagcatggacagcgtcttctggtttatgaccatgttgcaaatggtagcttgcatgatatgctgcactttgctgatgagaggagcgaattgcttacttggaatgcccgggttagagtagcacttggcactgctcgagctttagagtacttgcatgaagtctgtctaccttctgttgtacatagaaacttcaaatccgcaaatattttactagatgaagagctcagtccccatttatcagattgtgggttagcagctttgactcccacacagaacgccaggtgtcatctacacagatgattgggtcattcggctatagcgctcctgaatttgctttatctgga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="+" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="141806" stop="145253"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="142106" g_stop="142184" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="79" r_length="79" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="142185" i_stop="142336" i_length="152">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="142337" g_stop="142593" g_length="257"/>
          <reference_exon_boundary r_type="cDNA" r_start="80" r_stop="336" r_length="257" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="142594" i_stop="143992" i_length="1399">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.809" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="143993" g_stop="144264" g_length="272"/>
          <reference_exon_boundary r_type="cDNA" r_start="337" r_stop="608" r_length="272" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="144265" i_stop="144346" i_length="82">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="144347" g_stop="144482" g_length="136"/>
          <reference_exon_boundary r_type="cDNA" r_start="609" r_stop="743" r_length="135" r_score="0.985"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="144483" i_stop="144890" i_length="408">
            <donor d_prob="0.559" d_score="0.98"/>
            <acceptor a_prob="0.986" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="144891" g_stop="144953" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="744" r_stop="806" r_length="63" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="+" ref_id="SGN-E317418" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>807</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E317418" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="142106" e_stop="142184"/>
          <exon e_start="142337" e_stop="142593"/>
          <exon e_start="143993" e_stop="144264"/>
          <exon e_start="144347" e_stop="144482"/>
          <exon e_start="144891" e_stop="144953"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTGCTTCCGGAGGGGCAAGGGCAAGGAAATTGCTACAAGACCCTCTACAGGAAGTCTTCCAGTTGGCACAGATAAAGGTGTGTTCCCTTAACTTGGTCCCTTCCTGACACAATATTGTCATTGGTGCTAATACCCTCAGATGACTAATAGTTGTGTTGTGATGTGCCATCTTAGTTTGGAAATTGGTACGAACTTCGCTGATTTCTCATGTATTTCTGCTTAATCTTAGTGAATATGGAGGTACAAGAGCAAAGGGCGAAGCCTGTGGTTGCTGTTGCTGACTTGAAGCCCCCACCTACCGAAAAGGTGACTGTTGAAATGATACAAGGAAAGAATGGATCTGTCAGGAGAGTGAAGTCTCCAATAACTGCATCTGCTTATACTGTTGCTGCATTGCAAACAGCAACAAACAGCTTCAGTCAAGAAAATCTCATTGGTGAAGGATCTCTTGGGCGTGTTTATAGGGCAGAGTTTCCTAATGGGAAGGTAATTTCAGACGTTTAATGTTGTCACTCTTACGTTTCCTACTCGTGATGTGCATTCAAAACTATTTGAAGCTGAACAATATTGAATAAATTCAATCGGTCTCTCATGGACGTCTTTCATTTTTGATGCTTTGGAGAAACACATACTTGTGAGTTATATAATGTTCATCAGATACATAAGGACATCAAAAGGGATATATAAAGATGTTGGCCACTCCACCTATCACCCTGTTGCTAAGATGCTTTAACATAGAATCAAGCCGTTACACGTGTGGGACAATGTTGCATTACCTAATGTCCAACCTCGGGCAAATGAGGCTGTAATGATATGGTACCCGACCATAACTCAACCCCAAAAGTTAACTCATGAGGGGAGGATTGCTCAAGTCCGTATAAGGAGACCCATCAGCCTATTCCCCAACCAATGTGGGACTTTACCCTCTACCGGGAGCCCAAATGGAGATGTGGTCCAATCAGAGATGGACCTGGCAAAGATATGGCACCAGGGTCTAACTCAATCCCAAAAGCTTAGCTCATGAGGGGATGATTGCCCAAGTCCATATATGGAGACCACTAGTCCATTCCTCAACCAATGTGAGACTTTTACCCACTCTAACAAAGGCATCCAAAGTAGAATATAAGGTTCTTGTCCTACTTTATCCATTGCCTTAACGTTATGGTTGAACCCTTAGATTCTTTCACAATATCTGTCAAACCGGGCAAACACTAAAAGGGTACATACTTGATCTATGTGTTACTAAACCTGAGTAGATGTTAGTAGACTTCTTGATACTCTGTTCGCATGGGAGTTTAAGGATTGGGTCCTCTTGCTAGTACATAATCTGGTTTTGAGGTGATTTTTTTAACTGAGATTAAGTCCTTTATACTCTTTGATTGAACTTGCTCTTTTAGGTCTTTCGCAAAGTTGATTGCCCACAGTAGGACATTCTGATGAACACATGTCAATTGTTCACTCCTCTGGGTGGCCTGGTCACATCTTTGCTTTTATATGGATAGGTGTAATGATATGGTCACTTTGATGGTCATCTCACTTGTCTTCTCAGCCTGATTTAACTATGATACTATAACCTTGTCCTTTGGTTACATCATGCAATCCTAAGCAAAAATATTCTTAGTAGTTTCAAAGTCTGACATTATATATCTTCTACTTTGTGGTTTATTATTGGATGTGCTGCTGGTTATTTCTTTTTGAATGAACCAATTGTGTTGACTGTTTTTCTGCTCCAAACTTGATGCCAACTGTGTCCCAATAAATGATTTAAGAATTTCATATGTCAACAACATTTTTGATGAGGAAACTTTTAGTTTATTATTCATGTAGTTTCTAAGGAAGGTGCCAACTGAAAATCTGAATTGATCTTTTGAACTGTCCTTGCCAGATAATGGTCATAAAAAAGATCGACAGTGCAGCACTGTCGCTGCAGGAGGAAGATAACTTTCTCGAAGCTGTCTCAAATATGTCAAGGCTGAGACACCCAAACATTGTTCAATTGATAGGATATTGTGCTGAGCATGGACAGCGTCTTCTGGTTTATGACCATGTTGCAAATGGTAGCTTGCATGATATGCTGCACTTTGCTGATGAGAGGAGCGAATTGCTTACTTGGAATGCCCGGGTTAGAGTAGCACTTGGCACTGCTCGAGCTTTAGAGTATGTTATAGCTGTATAGTATTTTACTTGTCTTGCCCTTCTCTTGTTGAGTTAGCTTAAAACTTGAATGTCTTCTTTTCAGGTACTTGCATGAAGTCTGTCTACCTTCTGTTGTACATAGAAACTTCAAATCCGCAAATATTTTACTAGATGAAGAGCTCAATCCCCATTTATCAGATTGTGGGTTAGCAGCTTTGACTCCCAACACAGAACGCCAGGTGAGTGAGTAAAGAAGATTTAATCGACGTCGTTGTTTTAACGGAGGGCGTTAATAATTTTGGGTGGTAGTGATGCATATCATGTTTATGAGATGATGTCAATCAACTTACCTAGTACTGTAGTAGGAGCAATATTTATAAGCAACTATTTCTAGGTAGATCTTGACAGACTTAGTCATGAGACTGGCAATTCTGATTGTGGCAGCTTAGCATTGTTTTCTTATTCTTCTGGAGCAATCTTGTTAGGTGCTTAAACACTTGGATTACCACAGTGCACAAACTTTCAGGTGAATTATTTTTGTGAAAAGAGAACCTCCTTGTACAGAAGCTCGGGTGAAGGAAGCTAATGCGGGAAGGCTAATTGATTCTGTTATGGGCATTGCCTAAAATTGTTCTGAATGTTGACAGGTGTCATCTACACAGATGATTGGTTCATTCGGCTATAGCGCTCCTGAATTTGCTTTATCTGGA</genome_strand>
        <mrna_strand>TTTTGCTTCCGGAGGGGCAAGGGCAAGGAAATTGCTACAAGACCCTCTACAGGAAGTCTTCCAGTTGGCACAGATAAAG........................................................................................................................................................TGAATATGGAGGTACAAGAGCAAAGGGCGAAGCCTGTGGTTGCTGTTGCTGACTTGAAGCCCCCACCTACCGAAAAGGTGACTGTTGAAATGATACAAGGAAAGAATGGATCTGTCAGGAGAGTGAAGTCTCCAATAACTGCATCTGCTTATACTGTTGCTGCATTGCAAACAGCAACAAACAGCTTCAGTCAAGAAAATCTCATTGGTGAAGGATCTCTTGGGCGTGTTTATAGGGCAGAGTTTCCTAATGGGAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAATGGTCATAAAAAAGATCGACAGTGCAGCACTGTCGCTGCAGGAGGAAGATAACTTTCTCGAAGCTGTCTCAAATATGTCAAGGCTGAGACACCCAAACATTGTTCAATTGATAGGATATTGTGCTGAGCATGGACAGCGTCTTCTGGTTTATGACCATGTTGCAAATGGTAGCTTGCATGATATGCTGCACTTTGCTGATGAGAGGAGCGAATTGCTTACTTGGAATGCCCGGGTTAGAGTAGCACTTGGCACTGCTCGAGCTTTAGA..................................................................................GTACTTGCATGAAGTCTGTCTACCTTCTGTTGTACATAGAAACTTCAAATCCGCAAATATTTTACTAGATGAAGAGCTCAGTCCCCATTTATCAGATTGTGGGTTAGCAGCTTTGACTCCC-ACACAGAACGCCAG........................................................................................................................................................................................................................................................................................................................................................................................................................GTGTCATCTACACAGATGATTGGGTCATTCGGCTATAGCGCTCCTGAATTTGCTTTATCTGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E315998" ref_strand="+" ref_description="SGN-E315998 [cTOA-23-K13]">
      <seq>aagagcaaagggcgaagcctgtggttgctgttgctgacttgaagcccccacctaccgaaaaggtgactgttgaaatgatacaaggaaagaatggatctgtcaggagagtgaagtctccaataactgcatctgcttatactgttgctgcattgcaaacagcaacaaacagcttcagtcaagaaaatctcattggtgaaggatctcttgggcgtgtttatagggcagagtttcctaatgggaagataatggtcataaaaaagatcgacagtgcagcactgtcgctgcaggaggaagataactttctcgaagctgtctcaaatatgtcaaggctgagacacccaaacattgttcaattgataggatattgtgctgagcatggacagcgtcttctggtttatgaccatgttgcaaatggtagcttgcatgatatgctgcactttgctgatgagaggagcgaattgcttacttggaatgcccgggttagagtagcacttggcactgctcgagctttagagtacttgcatgaagtctgtctaccttctgttgtacatagaaacttcaaatccgcaaatattttactagatgaagagctcaatccc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="+" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="142052" stop="144731"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="142352" g_stop="142593" g_length="242"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="242" r_length="242" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="142594" i_stop="143992" i_length="1399">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.809" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="143993" g_stop="144264" g_length="272"/>
          <reference_exon_boundary r_type="cDNA" r_start="243" r_stop="514" r_length="272" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="144265" i_stop="144346" i_length="82">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="144347" g_stop="144431" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="515" r_stop="599" r_length="85" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="+" ref_id="SGN-E315998" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>599</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E315998" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="142352" e_stop="142593"/>
          <exon e_start="143993" e_stop="144264"/>
          <exon e_start="144347" e_stop="144431"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGAGCAAAGGGCGAAGCCTGTGGTTGCTGTTGCTGACTTGAAGCCCCCACCTACCGAAAAGGTGACTGTTGAAATGATACAAGGAAAGAATGGATCTGTCAGGAGAGTGAAGTCTCCAATAACTGCATCTGCTTATACTGTTGCTGCATTGCAAACAGCAACAAACAGCTTCAGTCAAGAAAATCTCATTGGTGAAGGATCTCTTGGGCGTGTTTATAGGGCAGAGTTTCCTAATGGGAAGGTAATTTCAGACGTTTAATGTTGTCACTCTTACGTTTCCTACTCGTGATGTGCATTCAAAACTATTTGAAGCTGAACAATATTGAATAAATTCAATCGGTCTCTCATGGACGTCTTTCATTTTTGATGCTTTGGAGAAACACATACTTGTGAGTTATATAATGTTCATCAGATACATAAGGACATCAAAAGGGATATATAAAGATGTTGGCCACTCCACCTATCACCCTGTTGCTAAGATGCTTTAACATAGAATCAAGCCGTTACACGTGTGGGACAATGTTGCATTACCTAATGTCCAACCTCGGGCAAATGAGGCTGTAATGATATGGTACCCGACCATAACTCAACCCCAAAAGTTAACTCATGAGGGGAGGATTGCTCAAGTCCGTATAAGGAGACCCATCAGCCTATTCCCCAACCAATGTGGGACTTTACCCTCTACCGGGAGCCCAAATGGAGATGTGGTCCAATCAGAGATGGACCTGGCAAAGATATGGCACCAGGGTCTAACTCAATCCCAAAAGCTTAGCTCATGAGGGGATGATTGCCCAAGTCCATATATGGAGACCACTAGTCCATTCCTCAACCAATGTGAGACTTTTACCCACTCTAACAAAGGCATCCAAAGTAGAATATAAGGTTCTTGTCCTACTTTATCCATTGCCTTAACGTTATGGTTGAACCCTTAGATTCTTTCACAATATCTGTCAAACCGGGCAAACACTAAAAGGGTACATACTTGATCTATGTGTTACTAAACCTGAGTAGATGTTAGTAGACTTCTTGATACTCTGTTCGCATGGGAGTTTAAGGATTGGGTCCTCTTGCTAGTACATAATCTGGTTTTGAGGTGATTTTTTTAACTGAGATTAAGTCCTTTATACTCTTTGATTGAACTTGCTCTTTTAGGTCTTTCGCAAAGTTGATTGCCCACAGTAGGACATTCTGATGAACACATGTCAATTGTTCACTCCTCTGGGTGGCCTGGTCACATCTTTGCTTTTATATGGATAGGTGTAATGATATGGTCACTTTGATGGTCATCTCACTTGTCTTCTCAGCCTGATTTAACTATGATACTATAACCTTGTCCTTTGGTTACATCATGCAATCCTAAGCAAAAATATTCTTAGTAGTTTCAAAGTCTGACATTATATATCTTCTACTTTGTGGTTTATTATTGGATGTGCTGCTGGTTATTTCTTTTTGAATGAACCAATTGTGTTGACTGTTTTTCTGCTCCAAACTTGATGCCAACTGTGTCCCAATAAATGATTTAAGAATTTCATATGTCAACAACATTTTTGATGAGGAAACTTTTAGTTTATTATTCATGTAGTTTCTAAGGAAGGTGCCAACTGAAAATCTGAATTGATCTTTTGAACTGTCCTTGCCAGATAATGGTCATAAAAAAGATCGACAGTGCAGCACTGTCGCTGCAGGAGGAAGATAACTTTCTCGAAGCTGTCTCAAATATGTCAAGGCTGAGACACCCAAACATTGTTCAATTGATAGGATATTGTGCTGAGCATGGACAGCGTCTTCTGGTTTATGACCATGTTGCAAATGGTAGCTTGCATGATATGCTGCACTTTGCTGATGAGAGGAGCGAATTGCTTACTTGGAATGCCCGGGTTAGAGTAGCACTTGGCACTGCTCGAGCTTTAGAGTATGTTATAGCTGTATAGTATTTTACTTGTCTTGCCCTTCTCTTGTTGAGTTAGCTTAAAACTTGAATGTCTTCTTTTCAGGTACTTGCATGAAGTCTGTCTACCTTCTGTTGTACATAGAAACTTCAAATCCGCAAATATTTTACTAGATGAAGAGCTCAATCCC</genome_strand>
        <mrna_strand>AAGAGCAAAGGGCGAAGCCTGTGGTTGCTGTTGCTGACTTGAAGCCCCCACCTACCGAAAAGGTGACTGTTGAAATGATACAAGGAAAGAATGGATCTGTCAGGAGAGTGAAGTCTCCAATAACTGCATCTGCTTATACTGTTGCTGCATTGCAAACAGCAACAAACAGCTTCAGTCAAGAAAATCTCATTGGTGAAGGATCTCTTGGGCGTGTTTATAGGGCAGAGTTTCCTAATGGGAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAATGGTCATAAAAAAGATCGACAGTGCAGCACTGTCGCTGCAGGAGGAAGATAACTTTCTCGAAGCTGTCTCAAATATGTCAAGGCTGAGACACCCAAACATTGTTCAATTGATAGGATATTGTGCTGAGCATGGACAGCGTCTTCTGGTTTATGACCATGTTGCAAATGGTAGCTTGCATGATATGCTGCACTTTGCTGATGAGAGGAGCGAATTGCTTACTTGGAATGCCCGGGTTAGAGTAGCACTTGGCACTGCTCGAGCTTTAGA..................................................................................GTACTTGCATGAAGTCTGTCTACCTTCTGTTGTACATAGAAACTTCAAATCCGCAAATATTTTACTAGATGAAGAGCTCAATCCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E559549" ref_strand="+" ref_description="SGN-E559549 [19064]">
      <seq>ctatgggaagataatggtcatcaaaaagatcgacagtgctgcactgtcgctgcaggaggaagataactttcttggaagctgtctcaaatatgtcaaggctgagacacccaaacattgttcaattgataggatattgtgctgagcatggacagcgtcttctgggtttatgaccatgttgcaaatggtagcttgcatgatatgctgcactttgctgatgagaggagcgaattgcttacttggaacgcccgggttagagtagcacttggcactgctcgagctttagagtacttgcatgaagtctgtctaccttctgttgtacatagaaacttcaaatccgcaaatattttactagatgaagagctcaatccccatttatcagattgtgggttagcagctttgactccaaacacagaacgccaggtgtcatccacacaaatgattggttcattcggttatagcgctcctgaatttgctttatctggaatatacacggtaaaaagtgatgtatatagttttggtgtggtgatgttggaattgttgacaggaaggaagccacttgatagttcaagggtgagatcggaacagtcccttgtgagatgggctacgcctcaactccatgatatagatgccttgtcaaaaatggttgatcctgcactaaatggcatgtatcctgcaaagtctttgtcccgttttcgctgatattattgcactc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="+" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="143685" stop="145565"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="143993" g_stop="144264" g_length="272"/>
          <reference_exon_boundary r_type="cDNA" r_start="11" r_stop="284" r_length="274" r_score="0.971"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="144265" i_stop="144346" i_length="82">
            <donor d_prob="0.990" d_score="0.98"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="144347" g_stop="144482" g_length="136"/>
          <reference_exon_boundary r_type="cDNA" r_start="285" r_stop="420" r_length="136" r_score="0.993"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="144483" i_stop="144890" i_length="408">
            <donor d_prob="0.559" d_score="0.98"/>
            <acceptor a_prob="0.986" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="144891" g_stop="145033" g_length="143"/>
          <reference_exon_boundary r_type="cDNA" r_start="421" r_stop="563" r_length="143" r_score="0.944"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="145034" i_stop="145117" i_length="84">
            <donor d_prob="0.985" d_score="0.94"/>
            <acceptor a_prob="0.992" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="145118" g_stop="145265" g_length="148"/>
          <reference_exon_boundary r_type="cDNA" r_start="564" r_stop="712" r_length="149" r_score="0.973"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="+" ref_id="SGN-E559549" ref_strand="+">
        <total_alignment_score>0.970</total_alignment_score>
        <cumulative_length_of_scored_exons>699</cumulative_length_of_scored_exons>
        <coverage percentage="0.982" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E559549" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="143993" e_stop="144264"/>
          <exon e_start="144347" e_stop="144482"/>
          <exon e_start="144891" e_stop="145033"/>
          <exon e_start="145118" e_stop="145265"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATAATGGTCATAAAAAAGATCGACAGTGCAGCACTGTCGCTGCAGGAGGAAGATAACTTTC-TCGAAGCTGTCTCAAATATGTCAAGGCTGAGACACCCAAACATTGTTCAATTGATAGGATATTGTGCTGAGCATGGACAGCGTCTTCT-GGTTTATGACCATGTTGCAAATGGTAGCTTGCATGATATGCTGCACTTTGCTGATGAGAGGAGCGAATTGCTTACTTGGAATGCCCGGGTTAGAGTAGCACTTGGCACTGCTCGAGCTTTAGAGTATGTTATAGCTGTATAGTATTTTACTTGTCTTGCCCTTCTCTTGTTGAGTTAGCTTAAAACTTGAATGTCTTCTTTTCAGGTACTTGCATGAAGTCTGTCTACCTTCTGTTGTACATAGAAACTTCAAATCCGCAAATATTTTACTAGATGAAGAGCTCAATCCCCATTTATCAGATTGTGGGTTAGCAGCTTTGACTCCCAACACAGAACGCCAGGTGAGTGAGTAAAGAAGATTTAATCGACGTCGTTGTTTTAACGGAGGGCGTTAATAATTTTGGGTGGTAGTGATGCATATCATGTTTATGAGATGATGTCAATCAACTTACCTAGTACTGTAGTAGGAGCAATATTTATAAGCAACTATTTCTAGGTAGATCTTGACAGACTTAGTCATGAGACTGGCAATTCTGATTGTGGCAGCTTAGCATTGTTTTCTTATTCTTCTGGAGCAATCTTGTTAGGTGCTTAAACACTTGGATTACCACAGTGCACAAACTTTCAGGTGAATTATTTTTGTGAAAAGAGAACCTCCTTGTACAGAAGCTCGGGTGAAGGAAGCTAATGCGGGAAGGCTAATTGATTCTGTTATGGGCATTGCCTAAAATTGTTCTGAATGTTGACAGGTGTCATCTACACAGATGATTGGTTCATTCGGCTATAGCGCTCCTGAATTTGCTTTATCTGGAATATACACTGTAAAAAGTGACGTATATAGTTTTGGTGTGGTAATGTTGGAGTTGTTAACAGGAAGGAAGCCACTTGATAGGTAAACTAGATCTTCAATACATTGCTAGTTAACTTACACTATTGAATTCTTTTAATGACTTGATTCTTGTTAAAAATCATATAGTTCAAGGGTGAGATCAGAGCAGTCCCTTGTGAGATGGGCTACGCCTCAACTCCATGATATAGATGCCTTGTCAAAAATGGTTGATCCTGCACTAAATGGCATGTATCCTGCAAAGTCTTTGTCCCG-TTTCGCTGATATTATTGCACTC</genome_strand>
        <mrna_strand>ATAATGGTCATCAAAAAGATCGACAGTGCTGCACTGTCGCTGCAGGAGGAAGATAACTTTCTTGGAAGCTGTCTCAAATATGTCAAGGCTGAGACACCCAAACATTGTTCAATTGATAGGATATTGTGCTGAGCATGGACAGCGTCTTCTGGGTTTATGACCATGTTGCAAATGGTAGCTTGCATGATATGCTGCACTTTGCTGATGAGAGGAGCGAATTGCTTACTTGGAACGCCCGGGTTAGAGTAGCACTTGGCACTGCTCGAGCTTTAGA..................................................................................GTACTTGCATGAAGTCTGTCTACCTTCTGTTGTACATAGAAACTTCAAATCCGCAAATATTTTACTAGATGAAGAGCTCAATCCCCATTTATCAGATTGTGGGTTAGCAGCTTTGACTCCAAACACAGAACGCCAG........................................................................................................................................................................................................................................................................................................................................................................................................................GTGTCATCCACACAAATGATTGGTTCATTCGGTTATAGCGCTCCTGAATTTGCTTTATCTGGAATATACACGGTAAAAAGTGATGTATATAGTTTTGGTGTGGTGATGTTGGAATTGTTGACAGGAAGGAAGCCACTTGATAG....................................................................................TTCAAGGGTGAGATCGGAACAGTCCCTTGTGAGATGGGCTACGCCTCAACTCCATGATATAGATGCCTTGTCAAAAATGGTTGATCCTGCACTAAATGGCATGTATCCTGCAAAGTCTTTGTCCCGTTTTCGCTGATATTATTGCACTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E551255" ref_strand="+" ref_description="SGN-E551255 [TUS-11-B4]">
      <seq>aatatgtcaaggctgagacacccaaacattgttcaattgataggatattgtgctgagcatggacagcgtcttctggtttatgaccatgttgcaaatggtagcttgcatgatatgctgcactttgctgatgagaggagcgaattgcttacttggaatgcccgggttagagtagcacttggcactgctcgagctttagagtacttgcatgaagtctgtctaccttctgttgtacatagaaacttcaaatccgcaaatattttactagatgaagagctcaatccccatttatcagattgtgggttagcagctttgactcccaacacagaacgccaggtgtcatctacacagatgattggttcattcggctatagcgctcctgaatttgctttatctggaatatacactgtaaaaagtgacgtatatagttttggtgtggtaatgttggagttgttaacaggaaggaagccacttgatagttcaagggtgagatcagagcagtcccttgtgagatgggctacgcctcaactccatgatatagatgccttgtcaaaaatggttgatcctgcactaaatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="+" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="143768" stop="145515"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="144068" g_stop="144264" g_length="197"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="197" r_length="197" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="144265" i_stop="144346" i_length="82">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="144347" g_stop="144482" g_length="136"/>
          <reference_exon_boundary r_type="cDNA" r_start="198" r_stop="333" r_length="136" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="144483" i_stop="144890" i_length="408">
            <donor d_prob="0.559" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="144891" g_stop="145033" g_length="143"/>
          <reference_exon_boundary r_type="cDNA" r_start="334" r_stop="476" r_length="143" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="145034" i_stop="145117" i_length="84">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="145118" g_stop="145215" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="477" r_stop="574" r_length="98" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="+" ref_id="SGN-E551255" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>574</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E551255" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="144068" e_stop="144264"/>
          <exon e_start="144347" e_stop="144482"/>
          <exon e_start="144891" e_stop="145033"/>
          <exon e_start="145118" e_stop="145215"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATATGTCAAGGCTGAGACACCCAAACATTGTTCAATTGATAGGATATTGTGCTGAGCATGGACAGCGTCTTCTGGTTTATGACCATGTTGCAAATGGTAGCTTGCATGATATGCTGCACTTTGCTGATGAGAGGAGCGAATTGCTTACTTGGAATGCCCGGGTTAGAGTAGCACTTGGCACTGCTCGAGCTTTAGAGTATGTTATAGCTGTATAGTATTTTACTTGTCTTGCCCTTCTCTTGTTGAGTTAGCTTAAAACTTGAATGTCTTCTTTTCAGGTACTTGCATGAAGTCTGTCTACCTTCTGTTGTACATAGAAACTTCAAATCCGCAAATATTTTACTAGATGAAGAGCTCAATCCCCATTTATCAGATTGTGGGTTAGCAGCTTTGACTCCCAACACAGAACGCCAGGTGAGTGAGTAAAGAAGATTTAATCGACGTCGTTGTTTTAACGGAGGGCGTTAATAATTTTGGGTGGTAGTGATGCATATCATGTTTATGAGATGATGTCAATCAACTTACCTAGTACTGTAGTAGGAGCAATATTTATAAGCAACTATTTCTAGGTAGATCTTGACAGACTTAGTCATGAGACTGGCAATTCTGATTGTGGCAGCTTAGCATTGTTTTCTTATTCTTCTGGAGCAATCTTGTTAGGTGCTTAAACACTTGGATTACCACAGTGCACAAACTTTCAGGTGAATTATTTTTGTGAAAAGAGAACCTCCTTGTACAGAAGCTCGGGTGAAGGAAGCTAATGCGGGAAGGCTAATTGATTCTGTTATGGGCATTGCCTAAAATTGTTCTGAATGTTGACAGGTGTCATCTACACAGATGATTGGTTCATTCGGCTATAGCGCTCCTGAATTTGCTTTATCTGGAATATACACTGTAAAAAGTGACGTATATAGTTTTGGTGTGGTAATGTTGGAGTTGTTAACAGGAAGGAAGCCACTTGATAGGTAAACTAGATCTTCAATACATTGCTAGTTAACTTACACTATTGAATTCTTTTAATGACTTGATTCTTGTTAAAAATCATATAGTTCAAGGGTGAGATCAGAGCAGTCCCTTGTGAGATGGGCTACGCCTCAACTCCATGATATAGATGCCTTGTCAAAAATGGTTGATCCTGCACTAAATG</genome_strand>
        <mrna_strand>AATATGTCAAGGCTGAGACACCCAAACATTGTTCAATTGATAGGATATTGTGCTGAGCATGGACAGCGTCTTCTGGTTTATGACCATGTTGCAAATGGTAGCTTGCATGATATGCTGCACTTTGCTGATGAGAGGAGCGAATTGCTTACTTGGAATGCCCGGGTTAGAGTAGCACTTGGCACTGCTCGAGCTTTAGA..................................................................................GTACTTGCATGAAGTCTGTCTACCTTCTGTTGTACATAGAAACTTCAAATCCGCAAATATTTTACTAGATGAAGAGCTCAATCCCCATTTATCAGATTGTGGGTTAGCAGCTTTGACTCCCAACACAGAACGCCAG........................................................................................................................................................................................................................................................................................................................................................................................................................GTGTCATCTACACAGATGATTGGTTCATTCGGCTATAGCGCTCCTGAATTTGCTTTATCTGGAATATACACTGTAAAAAGTGACGTATATAGTTTTGGTGTGGTAATGTTGGAGTTGTTAACAGGAAGGAAGCCACTTGATAG....................................................................................TTCAAGGGTGAGATCAGAGCAGTCCCTTGTGAGATGGGCTACGCCTCAACTCCATGATATAGATGCCTTGTCAAAAATGGTTGATCCTGCACTAAATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E688185" ref_strand="+" ref_description="SGN-E688185 [t3_tus_11_b04]">
      <seq>aatatgtcaaggctgagacacccaaacattgttcaattgataggatattgtgctgagcatggacagcgtcttctggtttatgaccatgttgcaaatggtagcttgcatgatatgctgcactttgctgatgagaggagcgaattgcttacttggaatgcccgggttagagtagcacttggcactgctcgagctttagagtacttgcatgaagtctgtctaccttctgttgtacatagaaacttcaaatccgcaaatattttactagatgaagagctcaatccccatttatcagattgtgggttagcagctttgactcccaacacagaacgccaggtgtcatctacacagatgattggttcattcggctatagcgctcctgaatttgctttatctggaatatacactgtaaaaagtgacgtatatagttttggtgtggtaatgttggagttgttaacaggaaggaagccacttgatagttcaagggtgagatcagagcagtcccttgtgagatgggctacgcctcaactccatgatatagatgccttgtcaaaaatggttgatcctgcactaaatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="+" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="143768" stop="145515"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="144068" g_stop="144264" g_length="197"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="197" r_length="197" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="144265" i_stop="144346" i_length="82">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="144347" g_stop="144482" g_length="136"/>
          <reference_exon_boundary r_type="cDNA" r_start="198" r_stop="333" r_length="136" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="144483" i_stop="144890" i_length="408">
            <donor d_prob="0.559" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="144891" g_stop="145033" g_length="143"/>
          <reference_exon_boundary r_type="cDNA" r_start="334" r_stop="476" r_length="143" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="145034" i_stop="145117" i_length="84">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="145118" g_stop="145215" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="477" r_stop="574" r_length="98" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="+" ref_id="SGN-E688185" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>574</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E688185" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="144068" e_stop="144264"/>
          <exon e_start="144347" e_stop="144482"/>
          <exon e_start="144891" e_stop="145033"/>
          <exon e_start="145118" e_stop="145215"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATATGTCAAGGCTGAGACACCCAAACATTGTTCAATTGATAGGATATTGTGCTGAGCATGGACAGCGTCTTCTGGTTTATGACCATGTTGCAAATGGTAGCTTGCATGATATGCTGCACTTTGCTGATGAGAGGAGCGAATTGCTTACTTGGAATGCCCGGGTTAGAGTAGCACTTGGCACTGCTCGAGCTTTAGAGTATGTTATAGCTGTATAGTATTTTACTTGTCTTGCCCTTCTCTTGTTGAGTTAGCTTAAAACTTGAATGTCTTCTTTTCAGGTACTTGCATGAAGTCTGTCTACCTTCTGTTGTACATAGAAACTTCAAATCCGCAAATATTTTACTAGATGAAGAGCTCAATCCCCATTTATCAGATTGTGGGTTAGCAGCTTTGACTCCCAACACAGAACGCCAGGTGAGTGAGTAAAGAAGATTTAATCGACGTCGTTGTTTTAACGGAGGGCGTTAATAATTTTGGGTGGTAGTGATGCATATCATGTTTATGAGATGATGTCAATCAACTTACCTAGTACTGTAGTAGGAGCAATATTTATAAGCAACTATTTCTAGGTAGATCTTGACAGACTTAGTCATGAGACTGGCAATTCTGATTGTGGCAGCTTAGCATTGTTTTCTTATTCTTCTGGAGCAATCTTGTTAGGTGCTTAAACACTTGGATTACCACAGTGCACAAACTTTCAGGTGAATTATTTTTGTGAAAAGAGAACCTCCTTGTACAGAAGCTCGGGTGAAGGAAGCTAATGCGGGAAGGCTAATTGATTCTGTTATGGGCATTGCCTAAAATTGTTCTGAATGTTGACAGGTGTCATCTACACAGATGATTGGTTCATTCGGCTATAGCGCTCCTGAATTTGCTTTATCTGGAATATACACTGTAAAAAGTGACGTATATAGTTTTGGTGTGGTAATGTTGGAGTTGTTAACAGGAAGGAAGCCACTTGATAGGTAAACTAGATCTTCAATACATTGCTAGTTAACTTACACTATTGAATTCTTTTAATGACTTGATTCTTGTTAAAAATCATATAGTTCAAGGGTGAGATCAGAGCAGTCCCTTGTGAGATGGGCTACGCCTCAACTCCATGATATAGATGCCTTGTCAAAAATGGTTGATCCTGCACTAAATG</genome_strand>
        <mrna_strand>AATATGTCAAGGCTGAGACACCCAAACATTGTTCAATTGATAGGATATTGTGCTGAGCATGGACAGCGTCTTCTGGTTTATGACCATGTTGCAAATGGTAGCTTGCATGATATGCTGCACTTTGCTGATGAGAGGAGCGAATTGCTTACTTGGAATGCCCGGGTTAGAGTAGCACTTGGCACTGCTCGAGCTTTAGA..................................................................................GTACTTGCATGAAGTCTGTCTACCTTCTGTTGTACATAGAAACTTCAAATCCGCAAATATTTTACTAGATGAAGAGCTCAATCCCCATTTATCAGATTGTGGGTTAGCAGCTTTGACTCCCAACACAGAACGCCAG........................................................................................................................................................................................................................................................................................................................................................................................................................GTGTCATCTACACAGATGATTGGTTCATTCGGCTATAGCGCTCCTGAATTTGCTTTATCTGGAATATACACTGTAAAAAGTGACGTATATAGTTTTGGTGTGGTAATGTTGGAGTTGTTAACAGGAAGGAAGCCACTTGATAG....................................................................................TTCAAGGGTGAGATCAGAGCAGTCCCTTGTGAGATGGGCTACGCCTCAACTCCATGATATAGATGCCTTGTCAAAAATGGTTGATCCTGCACTAAATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E272836" ref_strand="+" ref_description="SGN-E272836 [cLEM-25-A22]">
      <seq>atatgtcaaggctgagacacccaaacattgttcaattgataggatattgtgctgagcatggacagcgtcttctggtttatgaccatgttgcaaatggtagcttgcatgatatgctgcactttgctgatgagaggagcgaattgcttacttggaatgcccgggttagagtagcacttggcactgctcgagctttagagtacttgcatgaagtctgtctaccttctgttgtacatagaaacttcaaatccgcaaatattttactagatgaagagctcaatccccatttatcagattgtgggttagcagctttgactcccaacacagaacgccaggtgtcatctacacagatgattggttcattcggctatagcgctcctgaatttgctttatctggaatatacactgtaaaaagtgacgtata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="+" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="143769" stop="145279"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="144069" g_stop="144264" g_length="196"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="196" r_length="196" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="144265" i_stop="144346" i_length="82">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="144347" g_stop="144482" g_length="136"/>
          <reference_exon_boundary r_type="cDNA" r_start="197" r_stop="332" r_length="136" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="144483" i_stop="144890" i_length="408">
            <donor d_prob="0.559" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="144891" g_stop="144979" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="333" r_stop="421" r_length="89" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="+" ref_id="SGN-E272836" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>421</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E272836" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="144069" e_stop="144264"/>
          <exon e_start="144347" e_stop="144482"/>
          <exon e_start="144891" e_stop="144979"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATATGTCAAGGCTGAGACACCCAAACATTGTTCAATTGATAGGATATTGTGCTGAGCATGGACAGCGTCTTCTGGTTTATGACCATGTTGCAAATGGTAGCTTGCATGATATGCTGCACTTTGCTGATGAGAGGAGCGAATTGCTTACTTGGAATGCCCGGGTTAGAGTAGCACTTGGCACTGCTCGAGCTTTAGAGTATGTTATAGCTGTATAGTATTTTACTTGTCTTGCCCTTCTCTTGTTGAGTTAGCTTAAAACTTGAATGTCTTCTTTTCAGGTACTTGCATGAAGTCTGTCTACCTTCTGTTGTACATAGAAACTTCAAATCCGCAAATATTTTACTAGATGAAGAGCTCAATCCCCATTTATCAGATTGTGGGTTAGCAGCTTTGACTCCCAACACAGAACGCCAGGTGAGTGAGTAAAGAAGATTTAATCGACGTCGTTGTTTTAACGGAGGGCGTTAATAATTTTGGGTGGTAGTGATGCATATCATGTTTATGAGATGATGTCAATCAACTTACCTAGTACTGTAGTAGGAGCAATATTTATAAGCAACTATTTCTAGGTAGATCTTGACAGACTTAGTCATGAGACTGGCAATTCTGATTGTGGCAGCTTAGCATTGTTTTCTTATTCTTCTGGAGCAATCTTGTTAGGTGCTTAAACACTTGGATTACCACAGTGCACAAACTTTCAGGTGAATTATTTTTGTGAAAAGAGAACCTCCTTGTACAGAAGCTCGGGTGAAGGAAGCTAATGCGGGAAGGCTAATTGATTCTGTTATGGGCATTGCCTAAAATTGTTCTGAATGTTGACAGGTGTCATCTACACAGATGATTGGTTCATTCGGCTATAGCGCTCCTGAATTTGCTTTATCTGGAATATACACTGTAAAAAGTGACGTATA</genome_strand>
        <mrna_strand>ATATGTCAAGGCTGAGACACCCAAACATTGTTCAATTGATAGGATATTGTGCTGAGCATGGACAGCGTCTTCTGGTTTATGACCATGTTGCAAATGGTAGCTTGCATGATATGCTGCACTTTGCTGATGAGAGGAGCGAATTGCTTACTTGGAATGCCCGGGTTAGAGTAGCACTTGGCACTGCTCGAGCTTTAGA..................................................................................GTACTTGCATGAAGTCTGTCTACCTTCTGTTGTACATAGAAACTTCAAATCCGCAAATATTTTACTAGATGAAGAGCTCAATCCCCATTTATCAGATTGTGGGTTAGCAGCTTTGACTCCCAACACAGAACGCCAG........................................................................................................................................................................................................................................................................................................................................................................................................................GTGTCATCTACACAGATGATTGGTTCATTCGGCTATAGCGCTCCTGAATTTGCTTTATCTGGAATATACACTGTAAAAAGTGACGTATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E473836" ref_strand="+" ref_description="SGN-E473836 [cSTB-33-N10]">
      <seq>tgagcatggacagcgtcttctggtttatgaccatgttgcaaatggtagcttgcatgatatgctgcactttgctgatgagaggagcgaattgcttacttggaacgcccgggttagagtagcacttggcactgctcgagctttagagtacttgcatgaagtctgtctaccttctgttgtacatagaaacttcaaatccgcaaatattttactagatgaagagctcaatccccatttatcagattgtgggttagcagctttgactccaaacacagaacgccaggtgtcatccacacaaatgattggttcattcggttatagcgctcctgaatttgctttatctggaatatacacggtaaaaagtgatgtatatagttttggtgtggtgatgttggaattgttgacaggaaggaagccacttgatagttcaagggtgagatcggaacagtcccttgtgagatgggctacgcctcaactccatgatatagatgccttgtcaaaaatggttgatcctgcactaaatggcatgtatcctgca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="+" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="143821" stop="145529"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="144121" g_stop="144264" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="144" r_length="144" r_score="0.993"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="144265" i_stop="144346" i_length="82">
            <donor d_prob="0.990" d_score="0.98"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="144347" g_stop="144482" g_length="136"/>
          <reference_exon_boundary r_type="cDNA" r_start="145" r_stop="280" r_length="136" r_score="0.993"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="144483" i_stop="144890" i_length="408">
            <donor d_prob="0.559" d_score="0.98"/>
            <acceptor a_prob="0.986" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="144891" g_stop="145033" g_length="143"/>
          <reference_exon_boundary r_type="cDNA" r_start="281" r_stop="423" r_length="143" r_score="0.944"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="145034" i_stop="145117" i_length="84">
            <donor d_prob="0.985" d_score="0.94"/>
            <acceptor a_prob="0.992" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="145118" g_stop="145229" g_length="112"/>
          <reference_exon_boundary r_type="cDNA" r_start="424" r_stop="535" r_length="112" r_score="0.982"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="+" ref_id="SGN-E473836" ref_strand="+">
        <total_alignment_score>0.978</total_alignment_score>
        <cumulative_length_of_scored_exons>535</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E473836" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="144121" e_stop="144264"/>
          <exon e_start="144347" e_stop="144482"/>
          <exon e_start="144891" e_stop="145033"/>
          <exon e_start="145118" e_stop="145229"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAGCATGGACAGCGTCTTCTGGTTTATGACCATGTTGCAAATGGTAGCTTGCATGATATGCTGCACTTTGCTGATGAGAGGAGCGAATTGCTTACTTGGAATGCCCGGGTTAGAGTAGCACTTGGCACTGCTCGAGCTTTAGAGTATGTTATAGCTGTATAGTATTTTACTTGTCTTGCCCTTCTCTTGTTGAGTTAGCTTAAAACTTGAATGTCTTCTTTTCAGGTACTTGCATGAAGTCTGTCTACCTTCTGTTGTACATAGAAACTTCAAATCCGCAAATATTTTACTAGATGAAGAGCTCAATCCCCATTTATCAGATTGTGGGTTAGCAGCTTTGACTCCCAACACAGAACGCCAGGTGAGTGAGTAAAGAAGATTTAATCGACGTCGTTGTTTTAACGGAGGGCGTTAATAATTTTGGGTGGTAGTGATGCATATCATGTTTATGAGATGATGTCAATCAACTTACCTAGTACTGTAGTAGGAGCAATATTTATAAGCAACTATTTCTAGGTAGATCTTGACAGACTTAGTCATGAGACTGGCAATTCTGATTGTGGCAGCTTAGCATTGTTTTCTTATTCTTCTGGAGCAATCTTGTTAGGTGCTTAAACACTTGGATTACCACAGTGCACAAACTTTCAGGTGAATTATTTTTGTGAAAAGAGAACCTCCTTGTACAGAAGCTCGGGTGAAGGAAGCTAATGCGGGAAGGCTAATTGATTCTGTTATGGGCATTGCCTAAAATTGTTCTGAATGTTGACAGGTGTCATCTACACAGATGATTGGTTCATTCGGCTATAGCGCTCCTGAATTTGCTTTATCTGGAATATACACTGTAAAAAGTGACGTATATAGTTTTGGTGTGGTAATGTTGGAGTTGTTAACAGGAAGGAAGCCACTTGATAGGTAAACTAGATCTTCAATACATTGCTAGTTAACTTACACTATTGAATTCTTTTAATGACTTGATTCTTGTTAAAAATCATATAGTTCAAGGGTGAGATCAGAGCAGTCCCTTGTGAGATGGGCTACGCCTCAACTCCATGATATAGATGCCTTGTCAAAAATGGTTGATCCTGCACTAAATGGCATGTATCCTGCA</genome_strand>
        <mrna_strand>TGAGCATGGACAGCGTCTTCTGGTTTATGACCATGTTGCAAATGGTAGCTTGCATGATATGCTGCACTTTGCTGATGAGAGGAGCGAATTGCTTACTTGGAACGCCCGGGTTAGAGTAGCACTTGGCACTGCTCGAGCTTTAGA..................................................................................GTACTTGCATGAAGTCTGTCTACCTTCTGTTGTACATAGAAACTTCAAATCCGCAAATATTTTACTAGATGAAGAGCTCAATCCCCATTTATCAGATTGTGGGTTAGCAGCTTTGACTCCAAACACAGAACGCCAG........................................................................................................................................................................................................................................................................................................................................................................................................................GTGTCATCCACACAAATGATTGGTTCATTCGGTTATAGCGCTCCTGAATTTGCTTTATCTGGAATATACACGGTAAAAAGTGATGTATATAGTTTTGGTGTGGTGATGTTGGAATTGTTGACAGGAAGGAAGCCACTTGATAG....................................................................................TTCAAGGGTGAGATCGGAACAGTCCCTTGTGAGATGGGCTACGCCTCAACTCCATGATATAGATGCCTTGTCAAAAATGGTTGATCCTGCACTAAATGGCATGTATCCTGCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E555262" ref_strand="+" ref_description="SGN-E555262 [cTSC-6-O5]">
      <seq>ccccaatgtctgaagttgtgcaagcactggttcggttaatgcaaagagcaagtgtggtcaaaaggcgatccagtgatgaatcagctttcacatacaagactccggatcatgagacggttgacatgccatagataaaacatacacgacgaagcagcctttgcaattttgtaagtaacttctgtgaaggtcaagagtaactgtggcagatgaaactgggaggtgtcaataccagggacattaaatatgtaattatttttcacatcttcgtcgtttaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="+" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="145604" stop="146486"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="145904" g_stop="146186" g_length="283"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="283" r_length="283" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="+" ref_id="SGN-E555262" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>283</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E555262" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="145904" e_stop="146186"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCCCAATGTCTGAAGTTGTGCAAGCACTGGTTCGGTTAATGCAAAGAGCAAGTGTGGTCAAAAGGCGATCCAGTGATGAATCAGCTTTCACATACAAGACTCCGGATCATGAGACGGTTGACATGCCATAGATAAAACATACACGACGAAGCAGCCTTTGCAATTTTGTAAGTAACTTCTGTGAAGGTCAAGAGTAACTGTGGCAGATGAAACTGGGAGGTGTCAATACCAGGGACATTAAATATGTAATTATTTTTCACATCTTCGTCGTTTAAAAAAAAAA</genome_strand>
        <mrna_strand>CCCCAATGTCTGAAGTTGTGCAAGCACTGGTTCGGTTAATGCAAAGAGCAAGTGTGGTCAAAAGGCGATCCAGTGATGAATCAGCTTTCACATACAAGACTCCGGATCATGAGACGGTTGACATGCCATAGATAAAACATACACGACGAAGCAGCCTTTGCAATTTTGTAAGTAACTTCTGTGAAGGTCAAGAGTAACTGTGGCAGATGAAACTGGGAGGTGTCAATACCAGGGACATTAAATATGTAATTATTTTTCACATCTTCGTCGTTTAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E200845" ref_strand="+" ref_description="SGN-E200845 [cLEC-5-G3]">
      <seq>aaaatgtatgtatattgcataattataagtgtatggcaagaatatatatgtttttgtctcgctttatacaaaaacaaaaacacaatatatacacttctgttgtataaagttagagaaaattgtatttcactgcaattatataattcacaattgtataattcgttggcctttttctctgcaatatttgaagtaaaatgtttgtaatttgtataattaagtgtataacacgaagatatatatttttacatgtgtatatacaattttctctcgctttatacaaaatagaaacagaatttatacacttctgtgtatatagcgagataggcgagcgagaatggagagtggcgagcgagatttttgggagggagacgcctgacaaactttagctaacgtttgctatggagcacaattaaatcaaactctagctactccatttagttagattactag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="-" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="147238" stop="146193"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="146938" g_stop="146493" g_length="446"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="450" r_length="450" r_score="0.901"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="-" ref_id="SGN-E200845" ref_strand="+">
        <total_alignment_score>0.901</total_alignment_score>
        <cumulative_length_of_scored_exons>446</cumulative_length_of_scored_exons>
        <coverage percentage="0.991" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E200845" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="146938" e_stop="146493"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAATGTATGTATATTGCATAATTATAAGTGTATAGCAAGAAAATATATGTTTTT-TCTCGCTTTATACAAAAACAGAAACACAATATATACACTTCTGTTGTATAAAGCTAGA-AAAATTGTATTTCACTGCAATTGTATAATTCACAATTGTATAATTCTTTAGCCTTTTTCTCTGCAATATTTGAAGTAAAATGTTTGTAAATTATATAATTAAGTGTATAACACGAAGATATACATTTTTGCATGTGTATATACAATTTTCTCTCGCTTTATACAAAACAGAAACAGAAATTATACACTTCTGTGTATAAAGCGAGAGAGACGA--GA-ATGGGAGAGTGGCGAGCGAGACTTCTGGGAGAGAGACGCCTGGCAAATTTTTGTCAATGTTTGCTATGGAGCACAATTAAATCAAACCCTAGCTATTCAATTTAATTTAGGTTATTAG</genome_strand>
        <mrna_strand>AAAATGTATGTATATTGCATAATTATAAGTGTATGGCAAGAATATATATGTTTTTGTCTCGCTTTATACAAAAACAAAAACACAATATATACACTTCTGTTGTATAAAGTTAGAGAAAATTGTATTTCACTGCAATTATATAATTCACAATTGTATAATTCGTTGGCCTTTTTCTCTGCAATATTTGAAGTAAAATGTTTGTAATTTGTATAATTAAGTGTATAACACGAAGATATATATTTTTACATGTGTATATACAATTTTCTCTCGCTTTATACAAAATAGAAACAGAATTTATACACTTCTGTGTATATAGCGAGATAGGCGAGCGAGAATGGAGAGTGGCGAGCGAGATTTTTGGGAGGGAGACGCCTGACAAACTTTAGCTAACGTTTGCTATGGAGCACAATTAAATCAAACTCTAGCTACTCCATTT-AGTTAGATTACTAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E393076" ref_strand="+" ref_description="SGN-E393076 [TUS-37-J4]">
      <seq>taaaatgtatgtatattgcataattataagtgtatggcaagaatatatatgtttttgtctcgctttatacaaaaacaaaaacacaatatatacacttctgttgtataaagttagagaaaattgtatttcactgcaattatataattcacaattgtataattcgttggcctttttctctgcaatatttgaagtaaaatgtttgtaatttgtataattaagtgtataacacgaagatatatatttttacatgtgtatatacaattttctctcgctttatacaaaataaaaacagaatttatttttttttgtgtatatagcgagatag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="-" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="147239" stop="146343"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="146939" g_stop="146617" g_length="323"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="325" r_length="325" r_score="0.923"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="-" ref_id="SGN-E393076" ref_strand="+">
        <total_alignment_score>0.923</total_alignment_score>
        <cumulative_length_of_scored_exons>323</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E393076" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="146939" e_stop="146617"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAAATGTATGTATATTGCATAATTATAAGTGTATAGCAAGAAAATATATGTTTTT-TCTCGCTTTATACAAAAACAGAAACACAATATATACACTTCTGTTGTATAAAGCTAGA-AAAATTGTATTTCACTGCAATTGTATAATTCACAATTGTATAATTCTTTAGCCTTTTTCTCTGCAATATTTGAAGTAAAATGTTTGTAAATTATATAATTAAGTGTATAACACGAAGATATACATTTTTGCATGTGTATATACAATTTTCTCTCGCTTTATACAAAACAGAAACAGAAATTATACACTTCTGTGTATAAAGCGAGAGAG</genome_strand>
        <mrna_strand>TAAAATGTATGTATATTGCATAATTATAAGTGTATGGCAAGAATATATATGTTTTTGTCTCGCTTTATACAAAAACAAAAACACAATATATACACTTCTGTTGTATAAAGTTAGAGAAAATTGTATTTCACTGCAATTATATAATTCACAATTGTATAATTCGTTGGCCTTTTTCTCTGCAATATTTGAAGTAAAATGTTTGTAATTTGTATAATTAAGTGTATAACACGAAGATATATATTTTTACATGTGTATATACAATTTTCTCTCGCTTTATACAAAATAAAAACAGAATTTATTTTTTTTTGTGTATATAGCGAGATAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E393075" ref_strand="+" ref_description="SGN-E393075 [TUS-37-J2]">
      <seq>taaaatgtatgtatattgcataattataagtgtatggcaagaatatatatgtttttgtctcgctttatacaaaaacaaaaacacaatatatacacttctgttgtataaagttagagaaaattgtatttcactgcaattatataattcacaattgtataattcgttggcctttttctctgcaatatttgaagtaaaatgtttgtaatttgtataattaagtgtataacacgaagatatatatttttacatgtgtatatacaattttctctcgctttatacaaaatagaaacagaggttttttttttttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="-" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="147239" stop="146343"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="146939" g_stop="146634" g_length="306"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="308" r_length="308" r_score="0.918"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="-" ref_id="SGN-E393075" ref_strand="+">
        <total_alignment_score>0.918</total_alignment_score>
        <cumulative_length_of_scored_exons>306</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E393075" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="146939" e_stop="146634"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAAATGTATGTATATTGCATAATTATAAGTGTATAGCAAGAAAATATATGTTTTT-TCTCGCTTTATACAAAAACAGAAACACAATATATACACTTCTGTTGTATAAAGCTAGA-AAAATTGTATTTCACTGCAATTGTATAATTCACAATTGTATAATTCTTTAGCCTTTTTCTCTGCAATATTTGAAGTAAAATGTTTGTAAATTATATAATTAAGTGTATAACACGAAGATATACATTTTTGCATGTGTATATACAATTTTCTCTCGCTTTATACAAAACAGAAACAGAAATTATACACTTCTG</genome_strand>
        <mrna_strand>TAAAATGTATGTATATTGCATAATTATAAGTGTATGGCAAGAATATATATGTTTTTGTCTCGCTTTATACAAAAACAAAAACACAATATATACACTTCTGTTGTATAAAGTTAGAGAAAATTGTATTTCACTGCAATTATATAATTCACAATTGTATAATTCGTTGGCCTTTTTCTCTGCAATATTTGAAGTAAAATGTTTGTAATTTGTATAATTAAGTGTATAACACGAAGATATATATTTTTACATGTGTATATACAATTTTCTCTCGCTTTATACAAAATAGAAACAGAGGTTTTTTTTTTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E392727" ref_strand="+" ref_description="SGN-E392727 [TUS-37-J5]">
      <seq>taatatgtatgtatattgcataattataagtgtatggcaagaatatatatgtttttgtcacgctttatacaaaatttaaaacacaatatatacacttctgttgtataaagttagagaaaattgtatttcactgcaattatataattcacaatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="-" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="147239" stop="146489"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="146939" g_stop="146789" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="153" r_length="153" r_score="0.907"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="-" ref_id="SGN-E392727" ref_strand="+">
        <total_alignment_score>0.907</total_alignment_score>
        <cumulative_length_of_scored_exons>151</cumulative_length_of_scored_exons>
        <coverage percentage="0.987" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E392727" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="146939" e_stop="146789"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAAATGTATGTATATTGCATAATTATAAGTGTATAGCAAGAAAATATATGTTTTT-TCTCGCTTTATACAAAAACAGAAACACAATATATACACTTCTGTTGTATAAAGCTAGA-AAAATTGTATTTCACTGCAATTGTATAATTCACAATT</genome_strand>
        <mrna_strand>TAATATGTATGTATATTGCATAATTATAAGTGTATGGCAAGAATATATATGTTTTTGTCACGCTTTATACAAAATTTAAAACACAATATATACACTTCTGTTGTATAAAGTTAGAGAAAATTGTATTTCACTGCAATTATATAATTCACAATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E272898" ref_strand="+" ref_description="SGN-E272898 [cLEM-25-L1]">
      <seq>caaacctttaaaagaaaaaaaaattctatgacttctcggagcaattctttttctaatttctcagaatcatcgtaccgaataccgatgataaggattgttccaccgtcacgacttcggatcgggatgagcccctgaatccgggtcataggaacaactcgtttaacgggttattgggtttcacgttcgggtccaagaagatgaggaagaagaaacccttttgtcaggaaaaagcaattgtcgggttggctctattggtgatcggttttgtcgggatgaattggtggatgcctttcccggatccagaactcgggtcgggccttctcaggttgagttcaggttcttggaagaaaattcctccactctatcaattcgggaagaactgctaaaggcttgggccttggcgaagagagaaagcctcagaaaacaatctaccccacaatgctggctaaagctgctcattccttagctgagggacagaaaaaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="+" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="151704" stop="153183"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="152004" g_stop="152372" g_length="369"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="373" r_length="373" r_score="0.973"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="152373" i_stop="152783" i_length="411">
            <donor d_prob="0.997" d_score="0.98"/>
            <acceptor a_prob="0.998" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="152784" g_stop="152879" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="374" r_stop="471" r_length="98" r_score="0.906"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="152880" i_stop="152959" i_length="80">
            <donor d_prob="0.994" d_score="0.90"/>
            <acceptor a_prob="0.976" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="152960" g_stop="152972" g_length="13"/>
          <reference_exon_boundary r_type="cDNA" r_start="472" r_stop="484" r_length="13" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="+" ref_id="SGN-E272898" ref_strand="+">
        <total_alignment_score>0.959</total_alignment_score>
        <cumulative_length_of_scored_exons>478</cumulative_length_of_scored_exons>
        <coverage percentage="0.988" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E272898" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="152004" e_stop="152372"/>
          <exon e_start="152784" e_stop="152879"/>
          <exon e_start="152960" e_stop="152972"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAACCTTTAAAAGATAAAAAAATTCTATGACTTCTCGGAGCAATTCTTTTTCTAATTTCTCAGAATCATCGTAC-GAATAC-GATGATAAGGATTGTTCCACCGTCACGACTTCGGATCGGGATGAGCCCCTGAATCCGGGTCATAGGAACAACTCGTTTAACGGGTTATTGGGTTTCACGTTCGGGTCCAAGAAGATGAGGAAGAAGAAACCCTTTTGTCAGGAAAAAGCAATTGTCGGGTTGGCTCTATTGGTGATCGGTTTTGTCGGGATGAATTGGTGGATG-CTTTCCCGGATCCAGAACTCGGGTCGGG-CTTCTCAGGTTGAGTTCAGGTTCTTGGAAGATAATTCCTCCACTCTATCAATTCGGGTATGTTTGAATCACTCTTTTATGTTAATTCTTGAATACTTCCGCAAAAAAGTACAACTAATGTTGAAACTTAGTCGAAAGCTGGGTTATGGATATGAATTTTGTTAAAGATGGTACTTCAGATATTGTCAATCATCTCAATATTTAGCTGTGAAGTTGAAAAAATGAATCTTGAATGTTAAGCAACTAGATATATGTTACTTATTCGACAAACTGTAAACTTAACTTCTCTTTCTCTAAATTGTTTAGTATTGGAGTGAAATAGGGGCAACTATATGGATATAGAGGATTCATATGGCTGACCCGACTAATTTAGGAATGAGGCTTAGTTGATAGTTGAAGTATGAATTGATTCACTGAGTTGGAGGTCTTTTGATACATATGGAGTAAATGTTATTTTTGATATGGTAGGAAGAACTGCT-AAGGCTTGGG-CTTGGCGAAGAGAGAAAGCCTCAGAAAACAATCTACGCACGATTGCTGGCTAAAGCTGCTCATTCCTTAGCTGAGGTACTTTTTGTTTCTACAAGGAAGTGAGTAGATCTATTTAGTTGGTTTTACTTTGATAATGTGAGGTCGACACATTGCAGGGACAGAAAAAAT</genome_strand>
        <mrna_strand>CAAACCTTTAAAAGAAAAAAAAATTCTATGACTTCTCGGAGCAATTCTTTTTCTAATTTCTCAGAATCATCGTACCGAATACCGATGATAAGGATTGTTCCACCGTCACGACTTCGGATCGGGATGAGCCCCTGAATCCGGGTCATAGGAACAACTCGTTTAACGGGTTATTGGGTTTCACGTTCGGGTCCAAGAAGATGAGGAAGAAGAAACCCTTTTGTCAGGAAAAAGCAATTGTCGGGTTGGCTCTATTGGTGATCGGTTTTGTCGGGATGAATTGGTGGATGCCTTTCCCGGATCCAGAACTCGGGTCGGGCCTTCTCAGGTTGAGTTCAGGTTCTTGGAAGAAAATTCCTCCACTCTATCAATTCGG...........................................................................................................................................................................................................................................................................................................................................................................................................................GAAGAACTGCTAAAGGCTTGGGCCTTGGCGAAGAGAGAAAGCCTCAGAAAACAATCTACCCCACAATGCTGGCTAAAGCTGCTCATTCCTTAGCTGAG................................................................................GGACAGAAAAAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E364559" ref_strand="+" ref_description="SGN-E364559 [cLPP-18-D10]">
      <seq>taatttctcagaatcatcgtacgaatacgatgatatggattgttccaccatcccgacttcggatcgggatgagcccctgaatccgggtcataggaacaactcgtttaacgggttattgggtttcacgttcgggtccaagaagatgaggaagaagaaacccttttgtcaggaaaaagcaattgtcgggttggctctattggtgatcggttttgtcgggatgaattggtggatgctttcccggatccagaactcgggtcgggtttctcaggttgagttcaggttcttggaagataattcctccactctatcaattcgggaagaactgctaatgcttgtgcttggcgaagggagaaagcctcagaaaacaatctacgcacgattgctggctaaagctgctcattccttagctgagggacagaaaaaatcagagccaaaagatttgtgggctgaaccgtattttgttgcatcctcttggaaaccttgtgctgagcagcgtcaatggctacctagtgagggaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="+" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="151757" stop="153359"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="152057" g_stop="152372" g_length="316"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="316" r_length="316" r_score="0.987"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="152373" i_stop="152783" i_length="411">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="152784" g_stop="152879" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="317" r_stop="412" r_length="96" r_score="0.969"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="152880" i_stop="152959" i_length="80">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="152960" g_stop="153059" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="413" r_stop="512" r_length="100" r_score="0.980"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="153060" i_stop="153144" i_length="85">
            <donor d_prob="0.463" d_score="0.98"/>
            <acceptor a_prob="0.972" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="153145" g_stop="153152" g_length="8"/>
          <reference_exon_boundary r_type="cDNA" r_start="513" r_stop="520" r_length="8" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="+" ref_id="SGN-E364559" ref_strand="+">
        <total_alignment_score>0.982</total_alignment_score>
        <cumulative_length_of_scored_exons>520</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E364559" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="152057" e_stop="152372"/>
          <exon e_start="152784" e_stop="152879"/>
          <exon e_start="152960" e_stop="153059"/>
          <exon e_start="153145" e_stop="153152"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAATTTCTCAGAATCATCGTACGAATACGATGATAAGGATTGTTCCACCGTCACGACTTCGGATCGGGATGAGCCCCTGAATCCGGGTCATAGGAACAACTCGTTTAACGGGTTATTGGGTTTCACGTTCGGGTCCAAGAAGATGAGGAAGAAGAAACCCTTTTGTCAGGAAAAAGCAATTGTCGGGTTGGCTCTATTGGTGATCGGTTTTGTCGGGATGAATTGGTGGATGCTTTCCCGGATCCAGAACTCGGGTCGGGCTTCTCAGGTTGAGTTCAGGTTCTTGGAAGATAATTCCTCCACTCTATCAATTCGGGTATGTTTGAATCACTCTTTTATGTTAATTCTTGAATACTTCCGCAAAAAAGTACAACTAATGTTGAAACTTAGTCGAAAGCTGGGTTATGGATATGAATTTTGTTAAAGATGGTACTTCAGATATTGTCAATCATCTCAATATTTAGCTGTGAAGTTGAAAAAATGAATCTTGAATGTTAAGCAACTAGATATATGTTACTTATTCGACAAACTGTAAACTTAACTTCTCTTTCTCTAAATTGTTTAGTATTGGAGTGAAATAGGGGCAACTATATGGATATAGAGGATTCATATGGCTGACCCGACTAATTTAGGAATGAGGCTTAGTTGATAGTTGAAGTATGAATTGATTCACTGAGTTGGAGGTCTTTTGATACATATGGAGTAAATGTTATTTTTGATATGGTAGGAAGAACTGCTAAGGCTTGGGCTTGGCGAAGAGAGAAAGCCTCAGAAAACAATCTACGCACGATTGCTGGCTAAAGCTGCTCATTCCTTAGCTGAGGTACTTTTTGTTTCTACAAGGAAGTGAGTAGATCTATTTAGTTGGTTTTACTTTGATAATGTGAGGTCGACACATTGCAGGGACAGAAAAAATCCGAGCCAAAAGATTTGTGGGCTGAACCGTATTTTGTTGCTTCCTCTTGGAAACCTTGTGCTGAGCAGCGTCAATGGCTACCTAGTGGTCTCTCTCTCTCTCCCTCTTCCTCTCTTCATGCATGTTACGTTTCAGGTAGTTAACCTGCTTCTTATGTGGCTAAAATTTTCAGAGGGAAAA</genome_strand>
        <mrna_strand>TAATTTCTCAGAATCATCGTACGAATACGATGATATGGATTGTTCCACCATCCCGACTTCGGATCGGGATGAGCCCCTGAATCCGGGTCATAGGAACAACTCGTTTAACGGGTTATTGGGTTTCACGTTCGGGTCCAAGAAGATGAGGAAGAAGAAACCCTTTTGTCAGGAAAAAGCAATTGTCGGGTTGGCTCTATTGGTGATCGGTTTTGTCGGGATGAATTGGTGGATGCTTTCCCGGATCCAGAACTCGGGTCGGGTTTCTCAGGTTGAGTTCAGGTTCTTGGAAGATAATTCCTCCACTCTATCAATTCGG...........................................................................................................................................................................................................................................................................................................................................................................................................................GAAGAACTGCTAATGCTTGTGCTTGGCGAAGGGAGAAAGCCTCAGAAAACAATCTACGCACGATTGCTGGCTAAAGCTGCTCATTCCTTAGCTGAG................................................................................GGACAGAAAAAATCAGAGCCAAAAGATTTGTGGGCTGAACCGTATTTTGTTGCATCCTCTTGGAAACCTTGTGCTGAGCAGCGTCAATGGCTACCTAGTG.....................................................................................AGGGAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E325276" ref_strand="+" ref_description="SGN-E325276 [cTOC-1-B5]">
      <seq>gctaaagctgctcattccttagctgagggacagaaaaaatccgagccaaaagatttgtgggctgaaccgtattttgttgcttcctcttggaaaccttgtgctgagcagcgtcaatggctacctagtgagggaaaaaatggttacattattgtcactgcaaatggtgggataaatcagcagcgagtagctgtctgcaatattgttgctattgcaagattactcgatgcaaccttggttcttccgaaatttctgtacagtagtgtttggaaagatgtgagccagtttggcgagatctaccaggaggagcatttcattgactacctgaaacctgatattcgtatagttagagaacttcctcaggagttgcagtcattagatctagaggccattggcagtttggtgacagatgcagatgttgtaaaagaagcaaagccaggtttctacaagaaatatattcttcctattttacataaaaacggagttgttcattttcttggatttgggaatcgattggcatctgacccgttaccacctcaggtgcagagacttcgatgcagatgtaattttcatgctctgaaatttgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="+" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="152553" stop="155000"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="152853" g_stop="152879" g_length="27"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="27" r_length="27" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="152880" i_stop="152959" i_length="80">
            <donor d_prob="0.994" d_score="0.00"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="152960" g_stop="153059" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="28" r_stop="127" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="153060" i_stop="153144" i_length="85">
            <donor d_prob="0.463" d_score="1.00"/>
            <acceptor a_prob="0.972" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="153145" g_stop="153206" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="128" r_stop="189" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="153207" i_stop="153351" i_length="145">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="153352" g_stop="153440" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="190" r_stop="278" r_length="89" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="153441" i_stop="154192" i_length="752">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.978" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="154193" g_stop="154313" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="279" r_stop="399" r_length="121" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="154314" i_stop="154394" i_length="81">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="154395" g_stop="154538" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="400" r_stop="543" r_length="144" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="154539" i_stop="154659" i_length="121">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="154660" g_stop="154700" g_length="41"/>
          <reference_exon_boundary r_type="cDNA" r_start="544" r_stop="584" r_length="41" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="+" ref_id="SGN-E325276" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>584</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E325276" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="152853" e_stop="152879"/>
          <exon e_start="152960" e_stop="153059"/>
          <exon e_start="153145" e_stop="153206"/>
          <exon e_start="153352" e_stop="153440"/>
          <exon e_start="154193" e_stop="154313"/>
          <exon e_start="154395" e_stop="154538"/>
          <exon e_start="154660" e_stop="154700"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTAAAGCTGCTCATTCCTTAGCTGAGGTACTTTTTGTTTCTACAAGGAAGTGAGTAGATCTATTTAGTTGGTTTTACTTTGATAATGTGAGGTCGACACATTGCAGGGACAGAAAAAATCCGAGCCAAAAGATTTGTGGGCTGAACCGTATTTTGTTGCTTCCTCTTGGAAACCTTGTGCTGAGCAGCGTCAATGGCTACCTAGTGGTCTCTCTCTCTCTCCCTCTTCCTCTCTTCATGCATGTTACGTTTCAGGTAGTTAACCTGCTTCTTATGTGGCTAAAATTTTCAGAGGGAAAAAATGGTTACATTATTGTCACTGCAAATGGTGGGATAAATCAGCAGCGAGTAGCTGTAAGTTATGTCTTCTGCTGTGACATTATTTGTTCCATATTTCTTTAGTTTAGCTTGCCAAGCTAAGGACAAAGGTTCCGTGCTACTATTATATGAAAGCTATGGTCTTTTTTCTTAACTAACACATTTTTTCCTTGCACAACAGGTCTGCAATATTGTTGCTATTGCAAGATTACTCGATGCAACCTTGGTTCTTCCGAAATTTCTGTACAGTAGTGTTTGGAAAGATGTGAGGTAAAAACTTACTACTTACTGTCAATTTCACTTCTTTCTTTCCTTTTTCCTGTTGTACAATAGGGATTGCAAAATAATATAGCAAAACTGTCATAATAGTGGGATCTTTGATTACAGATTCACAACATCTTTGATATACTATTTTGTAACTTCACTTGCGAATTCTTGTTGTTGACTGGAAACACGTACTAGTTGAATAGTATTTCATTTAATTCTTTTCCATGTTCTTTCCATAACTAATTAAACAACTAAACTGTCTTAGTCTTGAAATTCTTTAACTCAATAATTGGGAATTTGTGATGTAACACTGATTTCTCTTTGGTCGCTTGTCTACACAACATTAGCTCTCCAATACTTTGTGATTAAACCAAAGGTTCGCCTGGCTTTTCTTTGTTGAATCTACTTTAGAGATGCAAGTATGTGATAGTTCTTTTCCTGAACTCTTCCCCAATGTGCTTTGAGCTATATAAGTATCTCCATATGCGTTTTTAACTGCTGTTGAACCTCCCTTGCATTTGCAACTAGCTATGCCCCGTCCAAAAAAAATTATATGTTATCTTGGAAGTGTTTGCATCAGTAACTTTTAGTATGATCTTCATCAAATAGAAATTAGAACTTTAAATAAGATATTTATGTGCCTTCCCGATTTTGCTTCCTTCGAACTTGTTTCCTTTTCTTGCTAATCTAAAACATTTGATACCTTATGAGTTCCTTATATTGAAGATTGATAGATGTAACTTATAATTTCTTAGCCAGTTTGGCGAGATCTACCAGGAGGAGCATTTCATTGACTACCTGAAACCTGATATTCGTATAGTTAGAGAACTTCCTCAGGAGTTGCAGTCATTAGATCTAGAGGCCATTGGCAGTTTGGTAAGACTCTCATCTAGATAAATCATTTTGAATATGATCATGTGAAGAAACTAGTTTCTGACAATCTTGAAATAAATCCAGGTGACAGATGCAGATGTTGTAAAAGAAGCAAAGCCAGGTTTCTACAAGAAATATATTCTTCCTATTTTACATAAAAACGGAGTTGTTCATTTTCTTGGATTTGGGAATCGATTGGCATCTGACCCGTTACCACCTCAGGTGCAGGTAAACCCATCGAACTTGATATTAGGCTTCCTTGTTGATTTCTCAATTTTTCATATTATCTTCTCATTTAGTCTGATTCCATAATTTCTACCTTGGTTCCTGATTTGGGGACTTCATCTAGAGACTTCGATGCAGATGTAATTTTCATGCTCTGAAATTTGT</genome_strand>
        <mrna_strand>GCTAAAGCTGCTCATTCCTTAGCTGAG................................................................................GGACAGAAAAAATCCGAGCCAAAAGATTTGTGGGCTGAACCGTATTTTGTTGCTTCCTCTTGGAAACCTTGTGCTGAGCAGCGTCAATGGCTACCTAGTG.....................................................................................AGGGAAAAAATGGTTACATTATTGTCACTGCAAATGGTGGGATAAATCAGCAGCGAGTAGCT.................................................................................................................................................GTCTGCAATATTGTTGCTATTGCAAGATTACTCGATGCAACCTTGGTTCTTCCGAAATTTCTGTACAGTAGTGTTTGGAAAGATGTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAGTTTGGCGAGATCTACCAGGAGGAGCATTTCATTGACTACCTGAAACCTGATATTCGTATAGTTAGAGAACTTCCTCAGGAGTTGCAGTCATTAGATCTAGAGGCCATTGGCAGTTTG.................................................................................GTGACAGATGCAGATGTTGTAAAAGAAGCAAAGCCAGGTTTCTACAAGAAATATATTCTTCCTATTTTACATAAAAACGGAGTTGTTCATTTTCTTGGATTTGGGAATCGATTGGCATCTGACCCGTTACCACCTCAGGTGCAG.........................................................................................................................AGACTTCGATGCAGATGTAATTTTCATGCTCTGAAATTTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E434041" ref_strand="+" ref_description="SGN-E434041 [STM-59-I16]">
      <seq>gtacaatagggattgcaaaatattatgcaaaaccgtctaaatagtggaatcttcgattacagattcacaacatcttcgatataccattttgtaccttcacttgcgaattcttgttgttgacttgaaacacgtactagttgaattgtatttcatttaattcttttccattttcttttcataactaattaaacatgtgaactgtcttcatcttgaaattcttttaactcaataattggaaatttgtgatgtaacactgatttctttttgatcgcttgtctacaaaacatgagctctccaatactttgtgattgtcccaaaggttcgcctggcttttctttgttgtatctactttagagatgcaagtatgctagagttcttttcctaaactgttccccaatgtgctttgagctatataagtatctccatatgcgtttttaactgctgtttaaccaccctttcatttacaactagctatgccctgtccgaaaaaaattatatgaagtgttgcatcagtaacttttagtatgatcttcatcaaatagaaattagaacttttaaataagatatttatgtgcctttcccattttgcttccttcaaacttgtttccttgttaatgtgaaacatttgataccttattagttccttatattgaagattgatagatgtaaactataatttcttagccagtttggcgatatctaccaggaggagcatttcattgactacctgaaacctgatattcgtgtagttagagaacttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="+" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="153195" stop="154569"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="153495" g_stop="154269" g_length="775"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="761" r_length="761" r_score="0.911"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="+" ref_id="SGN-E434041" ref_strand="+">
        <total_alignment_score>0.911</total_alignment_score>
        <cumulative_length_of_scored_exons>775</cumulative_length_of_scored_exons>
        <coverage percentage="1.018" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E434041" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="153495" e_stop="154269"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTACAATAGGGATTGCAAAATAATATAGCAAAACTGTCATAATAGTGGGATCTTTGATTACAGATTCACAACATCTTTGATATACTATTTTGTAACTTCACTTGCGAATTCTTGTTGTTGACTGGAAACACGTACTAGTTGAATAGTATTTCATTTAATTCTTTTCCATGTTCTTTCCATAACTAATTAAACAACTAAACTGTCTTAGTCTTGAAATTC-TTTAACTCAATAATTGGGAATTTGTGATGTAACACTGATTTCTCTTTGGTCGCTTGTCTACACAACATTAGCTCTCCAATACTTTGTGATTAAACCAAAGGTTCGCCTGGCTTTTCTTTGTTGAATCTACTTTAGAGATGCAAGTATGTGATAGTTCTTTTCCTGAACTCTTCCCCAATGTGCTTTGAGCTATATAAGTATCTCCATATGCGTTTTTAACTGCTGTTGAACCTCCCTTGCATTTGCAACTAGCTATGCCCCGTCCAAAAAAAATTATATGTTATCTTGGAAGTGTTTGCATCAGTAACTTTTAGTATGATCTTCATCAAATAGAAATTAGAAC-TTTAAATAAGATATTTATGTGCCTTCCCGATTTTGCTTCCTTCGAACTTGTTTCCTTTTCTTGCTAATCTAAAACATTTGATACCTTATGAGTTCCTTATATTGAAGATTGATAGATGTAACTTATAATTTCTTAGCCAGTTTGGCGAGATCTACCAGGAGGAGCATTTCATTGACTACCTGAAACCTGATATTCGTATAGTTAGAGAACTTC</genome_strand>
        <mrna_strand>GTACAATAGGGATTGCAAAATATTAT-GCAAAACCGTCTAAATAGTGGAATCTTCGATTACAGATTCACAACATCTTCGATATACCATTTTGTACCTTCACTTGCGAATTCTTGTTGTTGACTTGAAACACGTACTAGTTGAATTGTATTTCATTTAATTCTTTTCCATTTTCTTTTCATAACTAATTAAACATGTGAACTGTCTTCATCTTGAAATTCTTTTAACTCAATAATTGGAAATTTGTGATGTAACACTGATTTCTTTTTGATCGCTTGTCTACAAAACATGAGCTCTCCAATACTTTGTGATTGTCCCAAAGGTTCGCCTGGCTTTTCTTTGTTGTATCTACTTTAGAGATGCAAGTATGCTAGAGTTCTTTTCCTAAACTGTTCCCCAATGTGCTTTGAGCTATATAAGTATCTCCATATGCGTTTTTAACTGCTGTTTAACCACCCTTTCATTTACAACTAGCTATGCCCTGTCCGAAAAAAA-T-TA---TA---T-GAAGTG-TTGCATCAGTAACTTTTAGTATGATCTTCATCAAATAGAAATTAGAACTTTTAAATAAGATATTTATGTGCCTTTCCCATTTTGCTTCCTTCAAACTTGTTT-C----CTTGTTAATGTGAAACATTTGATACCTTATTAGTTCCTTATATTGAAGATTGATAGATGTAAACTATAATTTCTTAGCCAGTTTGGCGATATCTACCAGGAGGAGCATTTCATTGACTACCTGAAACCTGATATTCGTGTAGTTAGAGAACTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E404492" ref_strand="+" ref_description="SGN-E404492 [PPC-14-O7]">
      <seq>gtacaatagggattgcaaaatattatgcaaaaccgtctaaatagtggaatcttcgattacagattcacaacatcttcgatataccattttgtaccttcacttgcgaattcttgttgttgacttgaaacacgtactagttgaattgtatttcatttaattcttttccattttcttttcataactaattaaacatgtgaactgtcttcatcttgaaattcttttaactcaataattggaaatttgtgatgtaacactgatttctttttgatcgcttgtctacaaaacatgagctctccaatactttgtgattgtcccaaaggttcgcctggcttttctttgttgtatctactttagagatgcaagtatgctagagttcttttcctaaactgttccccaatgtgctttgagctatataagtatctccatatgcgtttttaactgctgtttaaccaccctttcatttacaactagctatgccct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="+" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="153195" stop="154273"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="153495" g_stop="153974" g_length="480"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="480" r_length="480" r_score="0.917"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="+" ref_id="SGN-E404492" ref_strand="+">
        <total_alignment_score>0.917</total_alignment_score>
        <cumulative_length_of_scored_exons>480</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E404492" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="153495" e_stop="153974"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTACAATAGGGATTGCAAAATAATATAGCAAAACTGTCATAATAGTGGGATCTTTGATTACAGATTCACAACATCTTTGATATACTATTTTGTAACTTCACTTGCGAATTCTTGTTGTTGACTGGAAACACGTACTAGTTGAATAGTATTTCATTTAATTCTTTTCCATGTTCTTTCCATAACTAATTAAACAACTAAACTGTCTTAGTCTTGAAATTC-TTTAACTCAATAATTGGGAATTTGTGATGTAACACTGATTTCTCTTTGGTCGCTTGTCTACACAACATTAGCTCTCCAATACTTTGTGATTAAACCAAAGGTTCGCCTGGCTTTTCTTTGTTGAATCTACTTTAGAGATGCAAGTATGTGATAGTTCTTTTCCTGAACTCTTCCCCAATGTGCTTTGAGCTATATAAGTATCTCCATATGCGTTTTTAACTGCTGTTGAACCTCCCTTGCATTTGCAACTAGCTATGCCCC</genome_strand>
        <mrna_strand>GTACAATAGGGATTGCAAAATATTAT-GCAAAACCGTCTAAATAGTGGAATCTTCGATTACAGATTCACAACATCTTCGATATACCATTTTGTACCTTCACTTGCGAATTCTTGTTGTTGACTTGAAACACGTACTAGTTGAATTGTATTTCATTTAATTCTTTTCCATTTTCTTTTCATAACTAATTAAACATGTGAACTGTCTTCATCTTGAAATTCTTTTAACTCAATAATTGGAAATTTGTGATGTAACACTGATTTCTTTTTGATCGCTTGTCTACAAAACATGAGCTCTCCAATACTTTGTGATTGTCCCAAAGGTTCGCCTGGCTTTTCTTTGTTGTATCTACTTTAGAGATGCAAGTATGCTAGAGTTCTTTTCCTAAACTGTTCCCCAATGTGCTTTGAGCTATATAAGTATCTCCATATGCGTTTTTAACTGCTGTTTAACCACCCTTTCATTTACAACTAGCTATGCCCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E206785" ref_strand="+" ref_description="SGN-E206785 [cLEC-31-J4]">
      <seq>agtcattagatctagaggccattggcagtttggtgacagatgcagatgttgtaaaagaagcaaagccaggtttctacaagaaatatattcttcctattttacataaaaacggagttgttcattttcttggatttgggaatcgattggcatctgacccgttaccacctcaggtgcaggtaaacccatcgaacttgatattaggcttccttgttgatttctcaatttttcatattatcttctcatttagtctgattccataatttctaccttggttcctgatttggggacttcatctagagacttcgatgcagatgtaattttcatgctctgaaatttgttccaaagatagaagaaactggagctttacttatacggagaatgcgtcagaatgttacacgcttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="+" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="153982" stop="155064"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="154282" g_stop="154313" g_length="32"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="32" r_length="32" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="154314" i_stop="154394" i_length="81">
            <donor d_prob="0.985" d_score="0.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="154395" g_stop="154764" g_length="370"/>
          <reference_exon_boundary r_type="cDNA" r_start="33" r_stop="402" r_length="370" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="+" ref_id="SGN-E206785" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>402</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E206785" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="154282" e_stop="154313"/>
          <exon e_start="154395" e_stop="154764"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTCATTAGATCTAGAGGCCATTGGCAGTTTGGTAAGACTCTCATCTAGATAAATCATTTTGAATATGATCATGTGAAGAAACTAGTTTCTGACAATCTTGAAATAAATCCAGGTGACAGATGCAGATGTTGTAAAAGAAGCAAAGCCAGGTTTCTACAAGAAATATATTCTTCCTATTTTACATAAAAACGGAGTTGTTCATTTTCTTGGATTTGGGAATCGATTGGCATCTGACCCGTTACCACCTCAGGTGCAGGTAAACCCATCGAACTTGATATTAGGCTTCCTTGTTGATTTCTCAATTTTTCATATTATCTTCTCATTTAGTCTGATTCCATAATTTCTACCTTGGTTCCTGATTTGGGGACTTCATCTAGAGACTTCGATGCAGATGTAATTTTCATGCTCTGAAATTTGTTCCAAAGATAGAAGAAACTGGAGCTTTACTTATACGGAGAATGCGTCAGAATGTTACACGCTTG</genome_strand>
        <mrna_strand>AGTCATTAGATCTAGAGGCCATTGGCAGTTTG.................................................................................GTGACAGATGCAGATGTTGTAAAAGAAGCAAAGCCAGGTTTCTACAAGAAATATATTCTTCCTATTTTACATAAAAACGGAGTTGTTCATTTTCTTGGATTTGGGAATCGATTGGCATCTGACCCGTTACCACCTCAGGTGCAGGTAAACCCATCGAACTTGATATTAGGCTTCCTTGTTGATTTCTCAATTTTTCATATTATCTTCTCATTTAGTCTGATTCCATAATTTCTACCTTGGTTCCTGATTTGGGGACTTCATCTAGAGACTTCGATGCAGATGTAATTTTCATGCTCTGAAATTTGTTCCAAAGATAGAAGAAACTGGAGCTTTACTTATACGGAGAATGCGTCAGAATGTTACACGCTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E434042" ref_strand="+" ref_description="SGN-E434042 [STM-59-I16]">
      <seq>acatcttattttgataaccgagaaatccgttctcgacccgccctttggaccaatcacagcctgtgttttcctagatatatacaaatgcttttggaacaattttatttgtttacttaccaaacaacagaaaatatgtaaggaaaccacttatttccatgaaaacatttttcttcaaatcaaacagacccttagctcaatatgtttgtgtgtgtgtcaggtgcaatctctggataatcaaagatgcaaacaacagtctaggaaaatcaaacaagttagcctagctttttcttatgagttgtgcaagtaaaggaattgagcaatgattatatataacatacttcgtggtcttcttaagctccactaatgcagggaagtggatttcacgatatgcttccagttcatttctttcttcttcacccccaccgtattcacagagcgaatgagctaccatatcaatttcaaacctcatatgcaaagctaaatatctagcaactttttctccacgatttcgttcacccttcagcatagactttgagaagggacccactaggtgacgatccaagggtcccaaacgtgtaacattctgacgcattctccgtataagtaaagctccagtttcttctatctttggaacaaatttcagagcatgaaaattacatctgcatcgaagtctctagatgaagtccccaaatcanggaccaacgtagaagttatggaatcagactaaatgagaagatgaaatgaaaatttgagaaatcaacaaggaagcctaatatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="-" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="155586" stop="154256"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="155275" g_stop="154556" g_length="720"/>
          <reference_exon_boundary r_type="cDNA" r_start="64" r_stop="777" r_length="714" r_score="0.944"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="-" ref_id="SGN-E434042" ref_strand="+">
        <total_alignment_score>0.944</total_alignment_score>
        <cumulative_length_of_scored_exons>720</cumulative_length_of_scored_exons>
        <coverage percentage="0.927" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E434042" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="155275" e_stop="154556"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTTTTCCTAGATATATACAAATGCTTTTGGAACAATTTTTTTTGTTTACTTATTAAACAGCAGAAAATATGTAAGAAAACCACTTATTTCCATGGAAACATTTTTCTTCAAATCAAACAGGCCCTTAGTTCAATATGTTTGTGTGTGTGTGTCTGGTGCACTCTCTGGATAATCAAAGATGCAAGCACCAGTCTAGGAAAATCAAACAAGTCAGCCTAGCTTTTTCTTATGAGTTGTGCATCAAGTAAAAGGAATTGAGCAATGATTACATATAACATACTTTGTGGTCTTCTTGAGTTCCACTAATGCAGGGAAGTGGATTTCACGATATAATTCCAGTTCATTTCTTTCTTCTTCACCCCCACCATATTCACAGAGGGAATGAGCCACCATATCAATTTCAAACCTCAGATGCAAAGCTAAATATCTAGCTACTTTTTCTCCACGATTATGTTCACCCTTCAGCATAGACTTTGAGAAGGGACCCACTAGGTGACGATCCAAGGGTCCCAAGCGTGTAACATTCTGACGCATTCTCCGTATAAGTAAAGCTCCAGTTTCTTCTATCTTTGGAACAAATTTCAGAGCATGAAAATTACATCTGCATCGAAGTCTCTAGATGAAGTCCCCAAATCAGGAACCAAGGTAGAAATTATGGAATCAGACTAAATGAGAAGATAATATGAAAAATTGAGAAATCAACAAGGAAGCCTAATATC</genome_strand>
        <mrna_strand>TGTTTTCCTAGATATATACAAATGCTTTTGGAACAATTTTATTTGTTTACTTACCAAACAACAGAAAATATGTAAGGAAACCACTTATTTCCATGAAAACATTTTTCTTCAAATCAAACAGACCCTTAGCTCAATATG-TT-TGTGTGTGTGTCAGGTGCAATCTCTGGATAATCAAAGATGCAAACAACAGTCTAGGAAAATCAAACAAGTTAGCCTAGCTTTTTCTTATGAGTTGTG---CAAGT-AAAGGAATTGAGCAATGATTATATATAACATACTTCGTGGTCTTCTTAAGCTCCACTAATGCAGGGAAGTGGATTTCACGATATGCTTCCAGTTCATTTCTTTCTTCTTCACCCCCACCGTATTCACAGAGCGAATGAGCTACCATATCAATTTCAAACCTCATATGCAAAGCTAAATATCTAGCAACTTTTTCTCCACGATTTCGTTCACCCTTCAGCATAGACTTTGAGAAGGGACCCACTAGGTGACGATCCAAGGGTCCCAAACGTGTAACATTCTGACGCATTCTCCGTATAAGTAAAGCTCCAGTTTCTTCTATCTTTGGAACAAATTTCAGAGCATGAAAATTACATCTGCATCGAAGTCTCTAGATGAAGTCCCCAAATCANGGACCAACGTAGAAGTTATGGAATCAGACTAAATGAGAAGATGAAATGAAAATTTGAGAAATCAACAAGGAAGCCTAATATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E468241" ref_strand="+" ref_description="SGN-E468241 [cSTB-3-E3]">
      <seq>gagacttcgatgcagatgtaattttcatgcctctgaaatttgttccaaagatagaagaaactggagctttacttataccggagaatgcgtcagaatgttacacgtttgggacccttggatcgtcacctagtgggtcccttctcaaagtctatgctgaagggtgaacgaaatcgtggagaaaaagttgctagatatttagctttgcatatgaggtttgaaattgatatggtagctcattccctctgtgaatatggtgggggtgaagaagaaagaaatgaactggaagcatatcgtgaaatccacttccctgcattagtggagcttaagaagaccacaaagttgccttccccagcagctctaaaggctgaaggattgtgtcctttaatgcctgaagagacggtgctaatgcttgctgcccttggttttaatcggcagacacgcatatacttggcaggtgcacatatctatggaggcaaatcaagattagcctccttgaccaccttgtatcctaatctggtcacaaaggaaagcttactttcctcttccgagattgaaccattcatgaatttctcatctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="+" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="154359" stop="155890"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="154659" g_stop="154994" g_length="336"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="338" r_length="338" r_score="0.958"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="154995" i_stop="155701" i_length="707">
            <donor d_prob="0.991" d_score="0.96"/>
            <acceptor a_prob="0.929" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="155702" g_stop="155890" g_length="189"/>
          <reference_exon_boundary r_type="cDNA" r_start="339" r_stop="527" r_length="189" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="+" ref_id="SGN-E468241" ref_strand="+">
        <total_alignment_score>0.968</total_alignment_score>
        <cumulative_length_of_scored_exons>525</cumulative_length_of_scored_exons>
        <coverage percentage="0.910" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E468241" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="154659" e_stop="154994"/>
          <exon e_start="155702" e_stop="155890"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGACTTCGATGCAGATGTAATTTTCATG-CTCTGAAATTTGTTCCAAAGATAGAAGAAACTGGAGCTTTACTTATA-CGGAGAATGCGTCAGAATGTTACACGCTTGGGACCCTTGGATCGTCACCTAGTGGGTCCCTTCTCAAAGTCTATGCTGAAGGGTGAACATAATCGTGGAGAAAAAGTAGCTAGATATTTAGCTTTGCATCTGAGGTTTGAAATTGATATGGTGGCTCATTCCCTCTGTGAATATGGTGGGGGTGAAGAAGAAAGAAATGAACTGGAATTATATCGTGAAATCCACTTCCCTGCATTAGTGGAACTCAAGAAGACCACAAAGTATGTTATATGTAATCATTGCTCAATTCCTTTTACTTGATGCACAACTCATAAGAAAAAGCTAGGCTGACTTGTTTGATTTTCCTAGACTGGTGCTTGCATCTTTGATTATCCAGAGAGTGCACCAGACACACACACACAAACATATTGAACTAAGGGCCTGTTTGATTTGAAGAAAAATGTTTCCATGGAAATAAGTGGTTTTCTTACATATTTTCTGCTGTTTAATAAGTAAACAAAAAAAATTGTTCCAAAAGCATTTGTATATATCTAGGAAAACACTATGGAGGTGGGGTGGGTTGTAGGATGGGGAGGAGGAGATGATCATCGGTGAATGTCACTTATGGAGCTTTATTTTGCCTACTTTTACAAGGGAAGCTCTTCATTTTAAAGGAACTTGATTTCCTTGAGATAATGTTTTTCAAAATTTTGTCCAAATATGAGAAAATTGGAAAATAGTAGCTTCTTATCTCTCTAGCATCTGGAGGTGTTCACGTCTTCTTGTTGCGGAAGTGGGTGGGGTCTCTGGATTACCTCTTATCGGACAATTTTAATTAAGCATGTCAAAGTGATGAGTAGTATTTTCTTCATAGATGCCAAATGACCTTAACCTATTTCTAGAGACATGTCATTGAGGTTATAACATTCAAATTTATTTAAAACTAGTCTCAGCTCAATTATTGATTCTGAAAAAAGTGTTTGTTCAGGTTGCCTTCCCCAGCAACTCTAAAGGCTGAAGGATTGTGTCCTTTAATGCCTGAAGAGACAGTGCTAATGCTTGCTGCCCTTGGTTTTAATCGGCAGACACGCATATACTTGGCAGGTGCACATATCTATGGAGGCAAATCAAGATTGGCCTCCTTGACCACCTTGTATCCTAATCTGGTCACAAAGGA</genome_strand>
        <mrna_strand>GAGACTTCGATGCAGATGTAATTTTCATGCCTCTGAAATTTGTTCCAAAGATAGAAGAAACTGGAGCTTTACTTATACCGGAGAATGCGTCAGAATGTTACACGTTTGGGACCCTTGGATCGTCACCTAGTGGGTCCCTTCTCAAAGTCTATGCTGAAGGGTGAACGAAATCGTGGAGAAAAAGTTGCTAGATATTTAGCTTTGCATATGAGGTTTGAAATTGATATGGTAGCTCATTCCCTCTGTGAATATGGTGGGGGTGAAGAAGAAAGAAATGAACTGGAAGCATATCGTGAAATCCACTTCCCTGCATTAGTGGAGCTTAAGAAGACCACAAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCCTTCCCCAGCAGCTCTAAAGGCTGAAGGATTGTGTCCTTTAATGCCTGAAGAGACGGTGCTAATGCTTGCTGCCCTTGGTTTTAATCGGCAGACACGCATATACTTGGCAGGTGCACATATCTATGGAGGCAAATCAAGATTAGCCTCCTTGACCACCTTGTATCCTAATCTGGTCACAAAGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>132</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="+" PGL_start="6054" PGL_stop="6555"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="6054" e_stop="6555"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.968"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.968">
            <gDNA_exon_boundary e_start="6054" e_stop="6555" e_length="502"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="6054" stop="6555"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E367403" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAAAGTGAAAGGTATATAAAGCAAAAACCAACAGCAAAGATTCTCCATAAACACTTTCCCAATGCTACAGTTTTCCTTAACTATACAAAATCTTGGTAGAGAAAATCTTCAAGCAAATCTCACATGGCCATTTCAAATTTGTCCATCTTTATTATTTTCCTTGTACTTCAATTTCTATGCATAACAGAAGCTCAATCAAGCATTTGTAGAAATTCTTGTGGCGATATCCCAATTCAGTATCCTTTTGGCATTGATGATGGCTGTGGAAGTCCATTTTATCGACACATTCTTGTATGCACTGGTGGTCAGCTTCAACTCAGAACCCCTTCTGGTAGATATCCTGTTAGAAATTTGAGTTATATGGATCCACATATTCTTGTGACCGATCCCTTAATGTGGAATTGTCTAGATGGTGACAATTTTCGACCTACCAGGCCGTTTAGCCTAGATACTAGCACACATTTCACTTTGTCCTCTGAAAATGACTACTTGTTCTTTAATT</gDNA_template>
            <first_frame> K  S  E  R  Y  I  K  Q  K  P  T  A  K  I  L  H  K  H  F  P  N  A  T  V  F  L  N  Y  T  K  S  W  *  R  K  S  S  S  K  S  H  M  A  I  S  N  L  S  I  F  I  I  F  L  V  L  Q  F  L  C  I  T  E  A  Q  S  S  I  C  R  N  S  C  G  D  I  P  I  Q  Y  P  F  G  I  D  D  G  C  G  S  P  F  Y  R  H  I  L  V  C  T  G  G  Q  L  Q  L  R  T  P  S  G  R  Y  P  V  R  N  L  S  Y  M  D  P  H  I  L  V  T  D  P  L  M  W  N  C  L  D  G  D  N  F  R  P  T  R  P  F  S  L  D  T  S  T  H  F  T  L  S  S  E  N  D  Y  L  F  F  N  </first_frame>
            <second_frame>  K  V  K  G  I  *  S  K  N  Q  Q  Q  R  F  S  I  N  T  F  P  M  L  Q  F  S  L  T  I  Q  N  L  G  R  E  N  L  Q  A  N  L  T  W  P  F  Q  I  C  P  S  L  L  F  S  L  Y  F  N  F  Y  A  *  Q  K  L  N  Q  A  F  V  E  I  L  V  A  I  S  Q  F  S  I  L  L  A  L  M  M  A  V  E  V  H  F  I  D  T  F  L  Y  A  L  V  V  S  F  N  S  E  P  L  L  V  D  I  L  L  E  I  *  V  I  W  I  H  I  F  L  *  P  I  P  *  C  G  I  V  *  M  V  T  I  F  D  L  P  G  R  L  A  *  I  L  A  H  I  S  L  C  P  L  K  M  T  T  C  S  L  I </second_frame>
            <third_frame>   K  *  K  V  Y  K  A  K  T  N  S  K  D  S  P  *  T  L  S  Q  C  Y  S  F  P  *  L  Y  K  I  L  V  E  K  I  F  K  Q  I  S  H  G  H  F  K  F  V  H  L  Y  Y  F  P  C  T  S  I  S  M  H  N  R  S  S  I  K  H  L  *  K  F  L  W  R  Y  P  N  S  V  S  F  W  H  *  *  W  L  W  K  S  I  L  S  T  H  S  C  M  H  W  W  S  A  S  T  Q  N  P  F  W  *  I  S  C  *  K  F  E  L  Y  G  S  T  Y  S  C  D  R  S  L  N  V  E  L  S  R  W  *  Q  F  S  T  Y  Q  A  V  *  P  R  Y  *  H  T  F  H  F  V  L  *  K  *  L  L  V  L  *   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0320D04.2" strand="+"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="6153" stop="6554"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>402</number_coding_nucleotides>
                  <number_encoded_amino_acids>134</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RKSSSKSHMAISNLSIFIIFLVLQFLCITEAQSSICRNSCGDIPIQYPFGIDDGCGSPFYRHILVCTGGQLQLRTPSGRYPVRNLSYMDPHILVTDPLMWNCLDGDNFRPTRPFSLDTSTHFTLSSENDYLFFN</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="+" PGL_start="7869" PGL_stop="8346"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="7869" e_stop="8346"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="7869" e_stop="8346" e_length="478"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7869" stop="8346"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E239391" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7874" stop="8346"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E238906" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTGAATCTTTCAAGCTAACTATGTATTCGCGAAGTATAAATTAGACATGTCAAGACATTAAAAAATCCTGTCGAAGATAACAGGGCATGCTGATGATAGGAAAAGGAAAGAAGGAAATTTTGTATCAGCATTTAGCAAGGTTCATTGACAACACATTGAAGAGGACCAGCATTGGAAGTTAAAGAGGGAGTAAATGCTCCGTGAGCAACAATGAACGATTGTCCTCTCGTGTATTTTGGAGCAATACTTCCATATCCAGATGGAAGAAAATAAGCTCCATTCATAAACATATCATTGGAGGATCTCCATTTCCAACTCTTCCATCCTTTTTCTTCAGTCTCCCTCTTGGTAACCTGTAACATAACGATGGCGATGACATTAGTATAAGTTGTTTTTTTTTGTGATTTCCAATTTGAGAACAGGTAGTTTGATGTTAGTATACCTCTTTGTTGTAAGCTTTGTCAGGAGCAATGAAATA</gDNA_template>
            <first_frame> L  N  L  S  S  *  L  C  I  R  E  V  *  I  R  H  V  K  T  L  K  N  P  V  E  D  N  R  A  C  *  *  *  E  K  E  R  R  K  F  C  I  S  I  *  Q  G  S  L  T  T  H  *  R  G  P  A  L  E  V  K  E  G  V  N  A  P  *  A  T  M  N  D  C  P  L  V  Y  F  G  A  I  L  P  Y  P  D  G  R  K  *  A  P  F  I  N  I  S  L  E  D  L  H  F  Q  L  F  H  P  F  S  S  V  S  L  L  V  T  C  N  I  T  M  A  M  T  L  V  *  V  V  F  F  C  D  F  Q  F  E  N  R  *  F  D  V  S  I  P  L  C  C  K  L  C  Q  E  Q  *  N  </first_frame>
            <second_frame>  *  I  F  Q  A  N  Y  V  F  A  K  Y  K  L  D  M  S  R  H  *  K  I  L  S  K  I  T  G  H  A  D  D  R  K  R  K  E  G  N  F  V  S  A  F  S  K  V  H  *  Q  H  I  E  E  D  Q  H  W  K  L  K  R  E  *  M  L  R  E  Q  Q  *  T  I  V  L  S  C  I  L  E  Q  Y  F  H  I  Q  M  E  E  N  K  L  H  S  *  T  Y  H  W  R  I  S  I  S  N  S  S  I  L  F  L  Q  S  P  S  W  *  P  V  T  *  R  W  R  *  H  *  Y  K  L  F  F  F  V  I  S  N  L  R  T  G  S  L  M  L  V  Y  L  F  V  V  S  F  V  R  S  N  E  I </second_frame>
            <third_frame>   E  S  F  K  L  T  M  Y  S  R  S  I  N  *  T  C  Q  D  I  K  K  S  C  R  R  *  Q  G  M  L  M  I  G  K  G  K  K  E  I  L  Y  Q  H  L  A  R  F  I  D  N  T  L  K  R  T  S  I  G  S  *  R  G  S  K  C  S  V  S  N  N  E  R  L  S  S  R  V  F  W  S  N  T  S  I  S  R  W  K  K  I  S  S  I  H  K  H  I  I  G  G  S  P  F  P  T  L  P  S  F  F  F  S  L  P  L  G  N  L  *  H  N  D  G  D  D  I  S  I  S  C  F  F  L  *  F  P  I  *  E  Q  V  V  *  C  *  Y  T  S  L  L  *  A  L  S  G  A  M  K   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0320D04.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="-" PGL_start="11957" PGL_stop="11352"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="11957" e_stop="11862"/>
            <exon e_start="11764" e_stop="11352"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.875" acc_prob="0.964" e_score="0.979"/>
          <exon-only e_score="0.944"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.979">
            <gDNA_exon_boundary e_start="11957" e_stop="11862" e_length="96"/>
          </exon>
          <intron i_serial="1" don_prob="0.875" acc_prob="0.964">
            <gDNA_intron_boundary i_start="11861" i_stop="11765" i_length="97"/>
          </intron>
          <exon e_serial="2" e_score="0.944">
            <gDNA_exon_boundary e_start="11764" e_stop="11352" e_length="413"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11957" stop="11862"/>
              <exon start="11764" stop="11352"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E436359" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CGTTACGAAAAATGGTTGATGTATGCTATTGGTGGAAGTGCTAATCCAACCATATTTAGTGAAGGAAATTATTTTTTGGCATCTAAATCCACACAA : GTTACAAAAAGGGAATCTAAGAATGGATGGCAAAATTGGAAGTGGAGGTCTTCAAAGGATAAATTTTTGAATGGAGCCTATTTTATACCATCTGGTTATGGTACTACTAATCCATATTACTCAAAGGCTCAATCATTTCCTGTGGCTGATGGATCTATGGTTCCTTCTTTAACTGCTGATGCTGGACCTTTGCGTTGTACTTCTTACAAATGTTAACCCCCTTCTTTTTTGGGCCTGGAATTATTTTAAGTGCATAATTGTTTGTTTTGTTTATGCACTAATTTTTATTTTATTTACTTCTACCAAATGGGGAGTCTTAAAAAACTAGAATCCCTGAGAATGAGATGACTACTGTATTGAGGATCCATTTTGGATATTGTGTTGTTCATTAAAAGAAAAACTTTCATGTAAAT</gDNA_template>
            <first_frame> R  Y  E  K  W  L  M  Y  A  I  G  G  S  A  N  P  T  I  F  S  E  G  N  Y  F  L  A  S  K  S  T  Q  :  V  T  K  R  E  S  K  N  G  W  Q  N  W  K  W  R  S  S  K  D  K  F  L  N  G  A  Y  F  I  P  S  G  Y  G  T  T  N  P  Y  Y  S  K  A  Q  S  F  P  V  A  D  G  S  M  V  P  S  L  T  A  D  A  G  P  L  R  C  T  S  Y  K  C  *  P  P  S  F  L  G  L  E  L  F  *  V  H  N  C  L  F  C  L  C  T  N  F  Y  F  I  Y  F  Y  Q  M  G  S  L  K  K  L  E  S  L  R  M  R  *  L  L  Y  *  G  S  I  L  D  I  V  L  F  I  K  R  K  T  F  M  *   </first_frame>
            <second_frame>  V  T  K  N  G  *  C  M  L  L  V  E  V  L  I  Q  P  Y  L  V  K  E  I  I  F  W  H  L  N  P  H  K :   L  Q  K  G  N  L  R  M  D  G  K  I  G  S  G  G  L  Q  R  I  N  F  *  M  E  P  I  L  Y  H  L  V  M  V  L  L  I  H  I  T  Q  R  L  N  H  F  L  W  L  M  D  L  W  F  L  L  *  L  L  M  L  D  L  C  V  V  L  L  T  N  V  N  P  L  L  F  W  A  W  N  Y  F  K  C  I  I  V  C  F  V  Y  A  L  I  F  I  L  F  T  S  T  K  W  G  V  L  K  N  *  N  P  *  E  *  D  D  Y  C  I  E  D  P  F  W  I  L  C  C  S  L  K  E  K  L  S  C  K  </second_frame>
            <third_frame>   L  R  K  M  V  D  V  C  Y  W  W  K  C  *  S  N  H  I  *  *  R  K  L  F  F  G  I  *  I  H  T   : S  Y  K  K  G  I  *  E  W  M  A  K  L  E  V  E  V  F  K  G  *  I  F  E  W  S  L  F  Y  T  I  W  L  W  Y  Y  *  S  I  L  L  K  G  S  I  I  S  C  G  *  W  I  Y  G  S  F  F  N  C  *  C  W  T  F  A  L  Y  F  L  Q  M  L  T  P  F  F  F  G  P  G  I  I  L  S  A  *  L  F  V  L  F  M  H  *  F  L  F  Y  L  L  L  P  N  G  E  S  *  K  T  R  I  P  E  N  E  M  T  T  V  L  R  I  H  F  G  Y  C  V  V  H  *  K  K  N  F  H  V  N </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0320D04.2" strand="-"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="11957" stop="11862"/>
                    <exon start="11764" stop="11549"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>309</number_coding_nucleotides>
                  <number_encoded_amino_acids>103</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RYEKWLMYAIGGSANPTIFSEGNYFLASKSTQVTKRESKNGWQNWKWRSSKDKFLNGAYFIPSGYGTTNPYYSKAQSFPVADGSMVPSLTADAGPLRCTSYKC*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="-" PGL_start="13209" PGL_stop="12532"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="13209" e_stop="12532"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.956"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.956">
            <gDNA_exon_boundary e_start="13209" e_stop="12532" e_length="678"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="13209" stop="12532"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E436358" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="13209" stop="12575"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E460729" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CTTGCTCTTCTTTTCTTGTGTATCTCAACGTTACAAGCCGAGTACTATGCACCTAGTAAAAACTATTATGCACCTTCTACTACTAAAAAAACCATGAACGTGATCGATTCATGTTGGCGTGCCAAGTCAAACTGGGCCAAAAATCGCTATGCATTAGCCGATTGTGCTGTCGGCTATGGCAAAGCAGCTATCGGAGGGAAAAACGGTGCGATATACGTCGTTACTAACCCGTCCGATGACCCGGTCAACCCTAAACCGGGTACACTAAGATATGGTGTAATCCAATCTAAACCACTGTGGATTATTTTCAACAAGGATATGGTTATAACGTTAAAGAATGAGCTTATGATCAATAGTTACAAAACTATTGATGGAAGGGGTGCAAAAGTTGAAATTGCATATGGACCTTGTATAACAATTCAACGTGTTAGTCATGTGATTATACATGGGATCAGTATACATGATTGTAAGCCGGGGAAAAGAGGTATAGTCCGGGATAGTCCGGTGCATGCCGGCCATCGTAACGGCGCTGACGGAGACGGCATTGATATATTTCAATCCACTCATGTTTGGATAGACCATTGTTATCTTGCACGTTGTACCGATGGACTTATTGACGTTATTCATGCTTCTACTGGTGTTACCATTTCAAATAACTACTTCACTCAGCATGATAAA</gDNA_template>
            <first_frame> L  A  L  L  F  L  C  I  S  T  L  Q  A  E  Y  Y  A  P  S  K  N  Y  Y  A  P  S  T  T  K  K  T  M  N  V  I  D  S  C  W  R  A  K  S  N  W  A  K  N  R  Y  A  L  A  D  C  A  V  G  Y  G  K  A  A  I  G  G  K  N  G  A  I  Y  V  V  T  N  P  S  D  D  P  V  N  P  K  P  G  T  L  R  Y  G  V  I  Q  S  K  P  L  W  I  I  F  N  K  D  M  V  I  T  L  K  N  E  L  M  I  N  S  Y  K  T  I  D  G  R  G  A  K  V  E  I  A  Y  G  P  C  I  T  I  Q  R  V  S  H  V  I  I  H  G  I  S  I  H  D  C  K  P  G  K  R  G  I  V  R  D  S  P  V  H  A  G  H  R  N  G  A  D  G  D  G  I  D  I  F  Q  S  T  H  V  W  I  D  H  C  Y  L  A  R  C  T  D  G  L  I  D  V  I  H  A  S  T  G  V  T  I  S  N  N  Y  F  T  Q  H  D  K </first_frame>
            <second_frame>  L  L  F  F  S  C  V  S  Q  R  Y  K  P  S  T  M  H  L  V  K  T  I  M  H  L  L  L  L  K  K  P  *  T  *  S  I  H  V  G  V  P  S  Q  T  G  P  K  I  A  M  H  *  P  I  V  L  S  A  M  A  K  Q  L  S  E  G  K  T  V  R  Y  T  S  L  L  T  R  P  M  T  R  S  T  L  N  R  V  H  *  D  M  V  *  S  N  L  N  H  C  G  L  F  S  T  R  I  W  L  *  R  *  R  M  S  L  *  S  I  V  T  K  L  L  M  E  G  V  Q  K  L  K  L  H  M  D  L  V  *  Q  F  N  V  L  V  M  *  L  Y  M  G  S  V  Y  M  I  V  S  R  G  K  E  V  *  S  G  I  V  R  C  M  P  A  I  V  T  A  L  T  E  T  A  L  I  Y  F  N  P  L  M  F  G  *  T  I  V  I  L  H  V  V  P  M  D  L  L  T  L  F  M  L  L  L  V  L  P  F  Q  I  T  T  S  L  S  M  I   </second_frame>
            <third_frame>   C  S  S  F  L  V  Y  L  N  V  T  S  R  V  L  C  T  *  *  K  L  L  C  T  F  Y  Y  *  K  N  H  E  R  D  R  F  M  L  A  C  Q  V  K  L  G  Q  K  S  L  C  I  S  R  L  C  C  R  L  W  Q  S  S  Y  R  R  E  K  R  C  D  I  R  R  Y  *  P  V  R  *  P  G  Q  P  *  T  G  Y  T  K  I  W  C  N  P  I  *  T  T  V  D  Y  F  Q  Q  G  Y  G  Y  N  V  K  E  *  A  Y  D  Q  *  L  Q  N  Y  *  W  K  G  C  K  S  *  N  C  I  W  T  L  Y  N  N  S  T  C  *  S  C  D  Y  T  W  D  Q  Y  T  *  L  *  A  G  E  K  R  Y  S  P  G  *  S  G  A  C  R  P  S  *  R  R  *  R  R  R  H  *  Y  I  S  I  H  S  C  L  D  R  P  L  L  S  C  T  L  Y  R  W  T  Y  *  R  Y  S  C  F  Y  W  C  Y  H  F  K  *  L  L  H  S  A  *  *  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0320D04.2" strand="-"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="13209" stop="12532"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>678</number_coding_nucleotides>
                  <number_encoded_amino_acids>226</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LALLFLCISTLQAEYYAPSKNYYAPSTTKKTMNVIDSCWRAKSNWAKNRYALADCAVGYGKAAIGGKNGAIYVVTNPSDDPVNPKPGTLRYGVIQSKPLWIIFNKDMVITLKNELMINSYKTIDGRGAKVEIAYGPCITIQRVSHVIIHGISIHDCKPGKRGIVRDSPVHAGHRNGADGDGIDIFQSTHVWIDHCYLARCTDGLIDVIHASTGVTISNNYFTQHDK</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="+" PGL_start="25371" PGL_stop="30043"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="25371" e_stop="25671"/>
            <exon e_start="26594" e_stop="26660"/>
            <exon e_start="27138" e_stop="27184"/>
            <exon e_start="27823" e_stop="27910"/>
            <exon e_start="28023" e_stop="28156"/>
            <exon e_start="28251" e_stop="28349"/>
            <exon e_start="29321" e_stop="29796"/>
            <exon e_start="30014" e_stop="30043"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.983" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.984" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.983" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.190" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.716" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.587" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.054" e_score="0.998"/>
          <exon-only e_score="0.400"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="25371" e_stop="25671" e_length="301"/>
          </exon>
          <intron i_serial="1" don_prob="0.983" acc_prob="0.995">
            <gDNA_intron_boundary i_start="25672" i_stop="26593" i_length="922"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="26594" e_stop="26660" e_length="67"/>
          </exon>
          <intron i_serial="2" don_prob="0.984" acc_prob="0.998">
            <gDNA_intron_boundary i_start="26661" i_stop="27137" i_length="477"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="27138" e_stop="27184" e_length="47"/>
          </exon>
          <intron i_serial="3" don_prob="0.983" acc_prob="1.000">
            <gDNA_intron_boundary i_start="27185" i_stop="27822" i_length="638"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="27823" e_stop="27910" e_length="88"/>
          </exon>
          <intron i_serial="4" don_prob="0.190" acc_prob="0.999">
            <gDNA_intron_boundary i_start="27911" i_stop="28022" i_length="112"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="28023" e_stop="28156" e_length="134"/>
          </exon>
          <intron i_serial="5" don_prob="0.716" acc_prob="0.989">
            <gDNA_intron_boundary i_start="28157" i_stop="28250" i_length="94"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="28251" e_stop="28349" e_length="99"/>
          </exon>
          <intron i_serial="6" don_prob="0.587" acc_prob="0.999">
            <gDNA_intron_boundary i_start="28350" i_stop="29320" i_length="971"/>
          </intron>
          <exon e_serial="7" e_score="0.998">
            <gDNA_exon_boundary e_start="29321" e_stop="29796" e_length="476"/>
          </exon>
          <intron i_serial="7" don_prob="0.000" acc_prob="0.054">
            <gDNA_intron_boundary i_start="29797" i_stop="30013" i_length="217"/>
          </intron>
          <exon e_serial="8" e_score="0.400">
            <gDNA_exon_boundary e_start="30014" e_stop="30043" e_length="30"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25371" stop="25671"/>
              <exon start="26594" stop="26660"/>
              <exon start="27138" stop="27184"/>
              <exon start="27823" stop="27910"/>
              <exon start="28023" stop="28156"/>
              <exon start="28251" stop="28349"/>
              <exon start="29321" stop="29366"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E709501" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25379" stop="25671"/>
              <exon start="26594" stop="26660"/>
              <exon start="27138" stop="27184"/>
              <exon start="27823" stop="27910"/>
              <exon start="28023" stop="28156"/>
              <exon start="28251" stop="28349"/>
              <exon start="29321" stop="29465"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E726585" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25379" stop="25671"/>
              <exon start="26594" stop="26660"/>
              <exon start="27138" stop="27184"/>
              <exon start="27823" stop="27910"/>
              <exon start="28023" stop="28156"/>
              <exon start="28251" stop="28349"/>
              <exon start="29321" stop="29358"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E347860" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25380" stop="25671"/>
              <exon start="26594" stop="26660"/>
              <exon start="27138" stop="27184"/>
              <exon start="27823" stop="27910"/>
              <exon start="28023" stop="28123"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E332949" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25383" stop="25671"/>
              <exon start="26594" stop="26660"/>
              <exon start="27138" stop="27184"/>
              <exon start="27823" stop="27910"/>
              <exon start="28023" stop="28156"/>
              <exon start="28251" stop="28328"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E316203" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25407" stop="25671"/>
              <exon start="26594" stop="26660"/>
              <exon start="27138" stop="27184"/>
              <exon start="27823" stop="27910"/>
              <exon start="28023" stop="28156"/>
              <exon start="28251" stop="28332"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E612187" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25422" stop="25671"/>
              <exon start="26594" stop="26660"/>
              <exon start="27138" stop="27184"/>
              <exon start="27823" stop="27910"/>
              <exon start="28023" stop="28156"/>
              <exon start="28251" stop="28349"/>
              <exon start="29321" stop="29517"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E727218" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25425" stop="25671"/>
              <exon start="26594" stop="26660"/>
              <exon start="27138" stop="27184"/>
              <exon start="27823" stop="27910"/>
              <exon start="28023" stop="28156"/>
              <exon start="28251" stop="28349"/>
              <exon start="29321" stop="29472"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E731772" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25426" stop="25671"/>
              <exon start="26594" stop="26660"/>
              <exon start="27138" stop="27184"/>
              <exon start="27823" stop="27910"/>
              <exon start="28023" stop="28115"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E358203" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25438" stop="25671"/>
              <exon start="26594" stop="26660"/>
              <exon start="27138" stop="27184"/>
              <exon start="27823" stop="27910"/>
              <exon start="28023" stop="28156"/>
              <exon start="28251" stop="28349"/>
              <exon start="29321" stop="29466"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E540908" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25439" stop="25671"/>
              <exon start="26594" stop="26660"/>
              <exon start="27138" stop="27184"/>
              <exon start="27823" stop="27909"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E293107" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25442" stop="25671"/>
              <exon start="26594" stop="26660"/>
              <exon start="27138" stop="27184"/>
              <exon start="27823" stop="27910"/>
              <exon start="28023" stop="28156"/>
              <exon start="28251" stop="28349"/>
              <exon start="29321" stop="29381"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E699173" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25454" stop="25671"/>
              <exon start="26594" stop="26660"/>
              <exon start="27138" stop="27184"/>
              <exon start="27823" stop="27910"/>
              <exon start="28023" stop="28156"/>
              <exon start="28251" stop="28318"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E323224" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25454" stop="25671"/>
              <exon start="26594" stop="26660"/>
              <exon start="27138" stop="27184"/>
              <exon start="27823" stop="27910"/>
              <exon start="28023" stop="28156"/>
              <exon start="28251" stop="28263"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E323035" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25645" stop="25671"/>
              <exon start="26594" stop="26660"/>
              <exon start="27138" stop="27184"/>
              <exon start="27823" stop="27910"/>
              <exon start="28023" stop="28037"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E261824" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25650" stop="25671"/>
              <exon start="26594" stop="26660"/>
              <exon start="27138" stop="27184"/>
              <exon start="27823" stop="27910"/>
              <exon start="28023" stop="28156"/>
              <exon start="28251" stop="28293"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E260203" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26594" stop="26660"/>
              <exon start="27138" stop="27184"/>
              <exon start="27823" stop="27910"/>
              <exon start="28023" stop="28156"/>
              <exon start="28251" stop="28349"/>
              <exon start="29321" stop="29366"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E260312" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28093" stop="28156"/>
              <exon start="28251" stop="28349"/>
              <exon start="29321" stop="29796"/>
              <exon start="30014" stop="30043"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E540906" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28253" stop="28349"/>
              <exon start="29321" stop="29687"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E352869" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29335" stop="29674"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E216072" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GGACGAGGAAACAACAAAAGGCGAGAAAAAAGATTCATTAAGTGCAGTGCTGGAGACGGAACCGTCAGATTCAGGAATGGCTGCTGCTTCCGCTACGGATGGTGTCGCTGCGACGGCAGTACGGTCGGTAATTCAGCGGATTGAACACGTGGCTGAACGATGTGGCCGCAGATCGGACCAAGTAAGGCTGGTGGCTGTAAGCAAAACTAAGCCAGTATCTCTCCTCAAACAAGTTTACGACGCCGGTCATCGTTGTTTCGGTGAAAATTACGTCAAAGAGCTCATTGAGAAAGCTCCTCAG : CTTCCAGATGATATAGAGTGGCATTTCATAGGGAATTTGCAGAGCAATAAAGTCAAGCCACTTTTAA : CTGGAGTGCCAAATCTTGCTATGGTGGAGACAGTAGATGATGAAAAG : ATTGCAAATCAGCTTGACCGTGTGGCTGCGAACATTGGAAGAAAGCCATTGAAAGTTTTTATCCAAGTTAATACAAGCGGGGAAGAAA : CTAAATCTGGTGTTGAACCAGATGGGTGTCTGGAACTCGTGAAACATGTTACTTCAAACTGCCCTAATCTTGAATTCTGTGGCTTGATGACTATTGGAATGCCAGATTATACATCGACTCCTGAAAACTTTAAG : ACTTTAGCAAAATGTAGAAGTGAAGTTTGCGAGGCACTTGGAATATCTGAAGATCAATGTGAGCTGTCAATGGGCATGTCAGGCGACTTTGAACTTGCT : GTTGAGATGGGCAGTACAAATGTTCGAGTTGGATCTACTATATTTGGTGCAAGGGAATATCCAACGAAGTAGTCATCGAACTAGGTTGATGAACCCAGTTTAGTGAAGAGAGCTTGAGCCAAACATGTACCTTAAGATTTTGCAGCTTCATGTCGGAATATGAGTGTTTGTACGATGCCACTATGGACCTCATTGGCTATGTGGCTACAATATCCTGTCTGTATTCTATCTATTATTACTGCTGAACATAGTCTTGACTCTTGAGCTGCGATCTCGATGTTCAATAGTATTTTGGGATTTGATAGACTCTCGTCTAGATGTACTAATTGATGATAATCTGTGAGAATACTTTTGGTCCGTGGATCTTCTTTTTTGATAGAACGACTAAACTATGCAGGGCAGCTAACAGTCGTAACTTGTGCAAACATGAGTTATGTATTATTTAAGTCATAAAATTATTATTTTTATCTATTAAG : TGCAGAAAAAACCCGGAATAATGTGACCAT</gDNA_template>
            <first_frame> G  R  G  N  N  K  R  R  E  K  R  F  I  K  C  S  A  G  D  G  T  V  R  F  R  N  G  C  C  F  R  Y  G  W  C  R  C  D  G  S  T  V  G  N  S  A  D  *  T  R  G  *  T  M  W  P  Q  I  G  P  S  K  A  G  G  C  K  Q  N  *  A  S  I  S  P  Q  T  S  L  R  R  R  S  S  L  F  R  *  K  L  R  Q  R  A  H  *  E  S  S  S   : A  S  R  *  Y  R  V  A  F  H  R  E  F  A  E  Q  *  S  Q  A  T  F  N :   W  S  A  K  S  C  Y  G  G  D  S  R  *  *  K   : D  C  K  S  A  *  P  C  G  C  E  H  W  K  K  A  I  E  S  F  Y  P  S  *  Y  K  R  G  R  N :   *  I  W  C  *  T  R  W  V  S  G  T  R  E  T  C  Y  F  K  L  P  *  S  *  I  L  W  L  D  D  Y  W  N  A  R  L  Y  I  D  S  *  K  L  *   : D  F  S  K  M  *  K  *  S  L  R  G  T  W  N  I  *  R  S  M  *  A  V  N  G  H  V  R  R  L  *  T  C   : C  *  D  G  Q  Y  K  C  S  S  W  I  Y  Y  I  W  C  K  G  I  S  N  E  V  V  I  E  L  G  *  *  T  Q  F  S  E  E  S  L  S  Q  T  C  T  L  R  F  C  S  F  M  S  E  Y  E  C  L  Y  D  A  T  M  D  L  I  G  Y  V  A  T  I  S  C  L  Y  S  I  Y  Y  Y  C  *  T  *  S  *  L  L  S  C  D  L  D  V  Q  *  Y  F  G  I  *  *  T  L  V  *  M  Y  *  L  M  I  I  C  E  N  T  F  G  P  W  I  F  F  F  D  R  T  T  K  L  C  R  A  A  N  S  R  N  L  C  K  H  E  L  C  I  I  *  V  I  K  L  L  F  L  S  I  K  :  C  R  K  N  P  E  *  C  D  H </first_frame>
            <second_frame>  D  E  E  T  T  K  G  E  K  K  D  S  L  S  A  V  L  E  T  E  P  S  D  S  G  M  A  A  A  S  A  T  D  G  V  A  A  T  A  V  R  S  V  I  Q  R  I  E  H  V  A  E  R  C  G  R  R  S  D  Q  V  R  L  V  A  V  S  K  T  K  P  V  S  L  L  K  Q  V  Y  D  A  G  H  R  C  F  G  E  N  Y  V  K  E  L  I  E  K  A  P  Q  :  L  P  D  D  I  E  W  H  F  I  G  N  L  Q  S  N  K  V  K  P  L  L   : T  G  V  P  N  L  A  M  V  E  T  V  D  D  E  K  :  I  A  N  Q  L  D  R  V  A  A  N  I  G  R  K  P  L  K  V  F  I  Q  V  N  T  S  G  E  E   : T  K  S  G  V  E  P  D  G  C  L  E  L  V  K  H  V  T  S  N  C  P  N  L  E  F  C  G  L  M  T  I  G  M  P  D  Y  T  S  T  P  E  N  F  K  :  T  L  A  K  C  R  S  E  V  C  E  A  L  G  I  S  E  D  Q  C  E  L  S  M  G  M  S  G  D  F  E  L  A  :  V  E  M  G  S  T  N  V  R  V  G  S  T  I  F  G  A  R  E  Y  P  T  K  *  S  S  N  *  V  D  E  P  S  L  V  K  R  A  *  A  K  H  V  P  *  D  F  A  A  S  C  R  N  M  S  V  C  T  M  P  L  W  T  S  L  A  M  W  L  Q  Y  P  V  C  I  L  S  I  I  T  A  E  H  S  L  D  S  *  A  A  I  S  M  F  N  S  I  L  G  F  D  R  L  S  S  R  C  T  N  *  *  *  S  V  R  I  L  L  V  R  G  S  S  F  L  I  E  R  L  N  Y  A  G  Q  L  T  V  V  T  C  A  N  M  S  Y  V  L  F  K  S  *  N  Y  Y  F  Y  L  L  S :   A  E  K  T  R  N  N  V  T   </second_frame>
            <third_frame>   T  R  K  Q  Q  K  A  R  K  K  I  H  *  V  Q  C  W  R  R  N  R  Q  I  Q  E  W  L  L  L  P  L  R  M  V  S  L  R  R  Q  Y  G  R  *  F  S  G  L  N  T  W  L  N  D  V  A  A  D  R  T  K  *  G  W  W  L  *  A  K  L  S  Q  Y  L  S  S  N  K  F  T  T  P  V  I  V  V  S  V  K  I  T  S  K  S  S  L  R  K  L  L  S :   F  Q  M  I  *  S  G  I  S  *  G  I  C  R  A  I  K  S  S  H  F  *  :  L  E  C  Q  I  L  L  W  W  R  Q  *  M  M  K  R :   L  Q  I  S  L  T  V  W  L  R  T  L  E  E  S  H  *  K  F  L  S  K  L  I  Q  A  G  K  K  :  L  N  L  V  L  N  Q  M  G  V  W  N  S  *  N  M  L  L  Q  T  A  L  I  L  N  S  V  A  *  *  L  L  E  C  Q  I  I  H  R  L  L  K  T  L  R :   L  *  Q  N  V  E  V  K  F  A  R  H  L  E  Y  L  K  I  N  V  S  C  Q  W  A  C  Q  A  T  L  N  L  L :   L  R  W  A  V  Q  M  F  E  L  D  L  L  Y  L  V  Q  G  N  I  Q  R  S  S  H  R  T  R  L  M  N  P  V  *  *  R  E  L  E  P  N  M  Y  L  K  I  L  Q  L  H  V  G  I  *  V  F  V  R  C  H  Y  G  P  H  W  L  C  G  Y  N  I  L  S  V  F  Y  L  L  L  L  L  N  I  V  L  T  L  E  L  R  S  R  C  S  I  V  F  W  D  L  I  D  S  R  L  D  V  L  I  D  D  N  L  *  E  Y  F  W  S  V  D  L  L  F  *  *  N  D  *  T  M  Q  G  S  *  Q  S  *  L  V  Q  T  *  V  M  Y  Y  L  S  H  K  I  I  I  F  I  Y  *   : V  Q  K  K  P  G  I  M  *  P  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0320D04.2" strand="+"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="25372" stop="25671"/>
                    <exon start="26594" stop="26660"/>
                    <exon start="27138" stop="27184"/>
                    <exon start="27823" stop="27910"/>
                    <exon start="28023" stop="28156"/>
                    <exon start="28251" stop="28349"/>
                    <exon start="29321" stop="29392"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>804</number_coding_nucleotides>
                  <number_encoded_amino_acids>268</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DEETTKGEKKDSLSAVLETEPSDSGMAAASATDGVAATAVRSVIQRIEHVAERCGRRSDQVRLVAVSKTKPVSLLKQVYDAGHRCFGENYVKELIEKAPQLPDDIEWHFIGNLQSNKVKPLLTGVPNLAMVETVDDEKIANQLDRVAANIGRKPLKVFIQVNTSGEETKSGVEPDGCLELVKHVTSNCPNLEFCGLMTIGMPDYTSTPENFKTLAKCRSEVCEALGISEDQCELSMGMSGDFELAVEMGSTNVRVGSTIFGAREYPTK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="25405" e_stop="25671"/>
            <exon e_start="26594" e_stop="26660"/>
            <exon e_start="27138" e_stop="27184"/>
            <exon e_start="27823" e_stop="27923"/>
            <exon e_start="28023" e_stop="28156"/>
            <exon e_start="28251" e_stop="28477"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.983" acc_prob="0.995" e_score="0.993"/>
          <exon-intron don_prob="0.984" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.983" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.798" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.716" acc_prob="0.989" e_score="1.000"/>
          <exon-only e_score="0.982"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.993">
            <gDNA_exon_boundary e_start="25405" e_stop="25671" e_length="267"/>
          </exon>
          <intron i_serial="1" don_prob="0.983" acc_prob="0.995">
            <gDNA_intron_boundary i_start="25672" i_stop="26593" i_length="922"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="26594" e_stop="26660" e_length="67"/>
          </exon>
          <intron i_serial="2" don_prob="0.984" acc_prob="0.998">
            <gDNA_intron_boundary i_start="26661" i_stop="27137" i_length="477"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="27138" e_stop="27184" e_length="47"/>
          </exon>
          <intron i_serial="3" don_prob="0.983" acc_prob="1.000">
            <gDNA_intron_boundary i_start="27185" i_stop="27822" i_length="638"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="27823" e_stop="27923" e_length="101"/>
          </exon>
          <intron i_serial="4" don_prob="0.798" acc_prob="0.999">
            <gDNA_intron_boundary i_start="27924" i_stop="28022" i_length="99"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="28023" e_stop="28156" e_length="134"/>
          </exon>
          <intron i_serial="5" don_prob="0.716" acc_prob="0.989">
            <gDNA_intron_boundary i_start="28157" i_stop="28250" i_length="94"/>
          </intron>
          <exon e_serial="6" e_score="0.982">
            <gDNA_exon_boundary e_start="28251" e_stop="28477" e_length="227"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25405" stop="25671"/>
              <exon start="26594" stop="26660"/>
              <exon start="27138" stop="27184"/>
              <exon start="27823" stop="27923"/>
              <exon start="28023" stop="28156"/>
              <exon start="28251" stop="28477"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E735956" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25439" stop="25671"/>
              <exon start="26594" stop="26660"/>
              <exon start="27138" stop="27184"/>
              <exon start="27823" stop="27909"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E293107" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCATTAAGTGCAGTGCTGGAGACGGAACCGTCAGATTCAGGAATGGCTGCTGCTTCCGCTACGGATGGTGTCGCTGCGACGGCAGTACGGTCGGTAATTCAGCGGATTGAACACGTGGCTGAACGATGTGGCCGCAGATCGGACCAAGTAAGGCTGGTGGCTGTAAGCAAAACTAAGCCAGTATCTCTCCTCAAACAAGTTTACGACGCCGGTCATCGTTGTTTCGGTGAAAATTACGTCAAAGAGCTCATTGAGAAAGCTCCTCAG : CTTCCAGATGATATAGAGTGGCATTTCATAGGGAATTTGCAGAGCAATAAAGTCAAGCCACTTTTAA : CTGGAGTGCCAAATCTTGCTATGGTGGAGACAGTAGATGATGAAAAG : ATTGCAAATCAGCTTGACCGTGTGGCTGCGAACATTGGAAGAAAGCCATTGAAAGTTTTTATCCAAGTTAATACAAGCGGGGAAGAAAGTGGGTATCTGGA : CTAAATCTGGTGTTGAACCAGATGGGTGTCTGGAACTCGTGAAACATGTTACTTCAAACTGCCCTAATCTTGAATTCTGTGGCTTGATGACTATTGGAATGCCAGATTATACATCGACTCCTGAAAACTTTAAG : ACTTTAGCAAAATGTAGAAGTGAAGTTTGCGAGGCACTTGGAATATCTGAAGATCAATGTGAGCTGTCAATGGGCATGTCAGGCGACTTTGAACTTGCTGTGAGTGACCTGACTTGTCACTAAGCACATCAAATCATTAGTAAGCTTGGAAGGAACTTGTATAACATGAGTTCTCTGGGGAGCATGTGGTAGTCTGAGTGCACCAATTATACAATCACTCTTTATAA</gDNA_template>
            <first_frame> S  L  S  A  V  L  E  T  E  P  S  D  S  G  M  A  A  A  S  A  T  D  G  V  A  A  T  A  V  R  S  V  I  Q  R  I  E  H  V  A  E  R  C  G  R  R  S  D  Q  V  R  L  V  A  V  S  K  T  K  P  V  S  L  L  K  Q  V  Y  D  A  G  H  R  C  F  G  E  N  Y  V  K  E  L  I  E  K  A  P  Q  :  L  P  D  D  I  E  W  H  F  I  G  N  L  Q  S  N  K  V  K  P  L  L   : T  G  V  P  N  L  A  M  V  E  T  V  D  D  E  K  :  I  A  N  Q  L  D  R  V  A  A  N  I  G  R  K  P  L  K  V  F  I  Q  V  N  T  S  G  E  E  S  G  Y  L  D :   *  I  W  C  *  T  R  W  V  S  G  T  R  E  T  C  Y  F  K  L  P  *  S  *  I  L  W  L  D  D  Y  W  N  A  R  L  Y  I  D  S  *  K  L  *   : D  F  S  K  M  *  K  *  S  L  R  G  T  W  N  I  *  R  S  M  *  A  V  N  G  H  V  R  R  L  *  T  C  C  E  *  P  D  L  S  L  S  T  S  N  H  *  *  A  W  K  E  L  V  *  H  E  F  S  G  E  H  V  V  V  *  V  H  Q  L  Y  N  H  S  L  * </first_frame>
            <second_frame>  H  *  V  Q  C  W  R  R  N  R  Q  I  Q  E  W  L  L  L  P  L  R  M  V  S  L  R  R  Q  Y  G  R  *  F  S  G  L  N  T  W  L  N  D  V  A  A  D  R  T  K  *  G  W  W  L  *  A  K  L  S  Q  Y  L  S  S  N  K  F  T  T  P  V  I  V  V  S  V  K  I  T  S  K  S  S  L  R  K  L  L  S :   F  Q  M  I  *  S  G  I  S  *  G  I  C  R  A  I  K  S  S  H  F  *  :  L  E  C  Q  I  L  L  W  W  R  Q  *  M  M  K  R :   L  Q  I  S  L  T  V  W  L  R  T  L  E  E  S  H  *  K  F  L  S  K  L  I  Q  A  G  K  K  V  G  I  W   : T  K  S  G  V  E  P  D  G  C  L  E  L  V  K  H  V  T  S  N  C  P  N  L  E  F  C  G  L  M  T  I  G  M  P  D  Y  T  S  T  P  E  N  F  K  :  T  L  A  K  C  R  S  E  V  C  E  A  L  G  I  S  E  D  Q  C  E  L  S  M  G  M  S  G  D  F  E  L  A  V  S  D  L  T  C  H  *  A  H  Q  I  I  S  K  L  G  R  N  L  Y  N  M  S  S  L  G  S  M  W  *  S  E  C  T  N  Y  T  I  T  L  Y   </second_frame>
            <third_frame>   I  K  C  S  A  G  D  G  T  V  R  F  R  N  G  C  C  F  R  Y  G  W  C  R  C  D  G  S  T  V  G  N  S  A  D  *  T  R  G  *  T  M  W  P  Q  I  G  P  S  K  A  G  G  C  K  Q  N  *  A  S  I  S  P  Q  T  S  L  R  R  R  S  S  L  F  R  *  K  L  R  Q  R  A  H  *  E  S  S  S   : A  S  R  *  Y  R  V  A  F  H  R  E  F  A  E  Q  *  S  Q  A  T  F  N :   W  S  A  K  S  C  Y  G  G  D  S  R  *  *  K   : D  C  K  S  A  *  P  C  G  C  E  H  W  K  K  A  I  E  S  F  Y  P  S  *  Y  K  R  G  R  K  W  V  S  G  :  L  N  L  V  L  N  Q  M  G  V  W  N  S  *  N  M  L  L  Q  T  A  L  I  L  N  S  V  A  *  *  L  L  E  C  Q  I  I  H  R  L  L  K  T  L  R :   L  *  Q  N  V  E  V  K  F  A  R  H  L  E  Y  L  K  I  N  V  S  C  Q  W  A  C  Q  A  T  L  N  L  L  *  V  T  *  L  V  T  K  H  I  K  S  L  V  S  L  E  G  T  C  I  T  *  V  L  W  G  A  C  G  S  L  S  A  P  I  I  Q  S  L  F  I  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0320D04.2" strand="+"/>
                <serials PGL_serial="5" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="25405" stop="25671"/>
                    <exon start="26594" stop="26660"/>
                    <exon start="27138" stop="27184"/>
                    <exon start="27823" stop="27923"/>
                    <exon start="28023" stop="28026"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>483</number_coding_nucleotides>
                  <number_encoded_amino_acids>161</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SLSAVLETEPSDSGMAAASATDGVAATAVRSVIQRIEHVAERCGRRSDQVRLVAVSKTKPVSLLKQVYDAGHRCFGENYVKELIEKAPQLPDDIEWHFIGNLQSNKVKPLLTGVPNLAMVETVDDEKIANQLDRVAANIGRKPLKVFIQVNTSGEESGYLD*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="-" PGL_start="41624" PGL_stop="35259"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="41624" e_stop="41433"/>
            <exon e_start="41359" e_stop="41039"/>
            <exon e_start="40766" e_stop="40650"/>
            <exon e_start="39947" e_stop="39847"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.956" e_score="0.917"/>
          <exon-intron don_prob="0.981" acc_prob="0.998" e_score="0.977"/>
          <exon-intron don_prob="0.999" acc_prob="0.156" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.917">
            <gDNA_exon_boundary e_start="41624" e_stop="41433" e_length="192"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.956">
            <gDNA_intron_boundary i_start="41432" i_stop="41360" i_length="73"/>
          </intron>
          <exon e_serial="2" e_score="0.977">
            <gDNA_exon_boundary e_start="41359" e_stop="41039" e_length="321"/>
          </exon>
          <intron i_serial="2" don_prob="0.981" acc_prob="0.998">
            <gDNA_intron_boundary i_start="41038" i_stop="40767" i_length="272"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="40766" e_stop="40650" e_length="117"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="0.156">
            <gDNA_intron_boundary i_start="40649" i_stop="39948" i_length="702"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="39947" e_stop="39847" e_length="101"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="41624" stop="41433"/>
              <exon start="41359" stop="41039"/>
              <exon start="40766" stop="40650"/>
              <exon start="39947" stop="39881"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E418512" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="41624" stop="41433"/>
              <exon start="41359" stop="41039"/>
              <exon start="40766" stop="40755"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E442163" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="41541" stop="41433"/>
              <exon start="41359" stop="41061"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E365848" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="41317" stop="41039"/>
              <exon start="40766" stop="40650"/>
              <exon start="39947" stop="39847"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E248377" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GTGAAAACGACGTCGTTAGGTTCTTCCCCTTCCTTGTCTTTGAGACAGTTGTGCACCAAGGAACAGAACAAAAGGCAAAGCACCAGCAAGCAGTGTGAAACCAAAAAAAAAGAGCATTTGGTGTCGTCTCTGAAATGCTTCTCTCTCTCATTCGCTCCCTTCAACCGCCACCTGTTCAATGTAAAGACACAC : GAGAAGGAGCAAAGAGAATTCAAACCTATGAAGAAGAAGTCGGCGGCGGCGATGGCTATGGCGGCGACCGCCGGAATGTCTGTCAGAAACGTGTTGTGGTTGTGGTGGAAGTTGTTGGTTCTGGTTTCTCTTACTATTTGTGTGTTGGCTTTTCTAAAGCTTCAAAACTACTCTCTTTCCGATTCGGAACTTTCCTCTTCTACTTCTTCAATTTCCAGTAGATCTCGAGCTCTTTATTATACTGGCAATCCCAAAGTTGCGTTCCTCTTTCTAGTGCGGAGGAATTTGCCTCTCGATTTCCTTTGGGGAAATTTCTTTGAG : AATGCTGACCCTGGCAATTTTTCCATATATGTACATTCGGAGCCTGGTTTTGTTTTTGATGAGTCTACAACAAGATCAACTTTCTTTTATAATCGCCAATTGACAAATAGCATCAAG : GTAGCTTGGGGAGAATCAAGTATGATCCACGCAGAAAAATTATTACTTGGCGCGGCACTTGATGATCCAGCAAATCAAAGATTTGTTCTCTTGTCGGACAG</gDNA_template>
            <first_frame> V  K  T  T  S  L  G  S  S  P  S  L  S  L  R  Q  L  C  T  K  E  Q  N  K  R  Q  S  T  S  K  Q  C  E  T  K  K  K  E  H  L  V  S  S  L  K  C  F  S  L  S  F  A  P  F  N  R  H  L  F  N  V  K  T  H  :  E  K  E  Q  R  E  F  K  P  M  K  K  K  S  A  A  A  M  A  M  A  A  T  A  G  M  S  V  R  N  V  L  W  L  W  W  K  L  L  V  L  V  S  L  T  I  C  V  L  A  F  L  K  L  Q  N  Y  S  L  S  D  S  E  L  S  S  S  T  S  S  I  S  S  R  S  R  A  L  Y  Y  T  G  N  P  K  V  A  F  L  F  L  V  R  R  N  L  P  L  D  F  L  W  G  N  F  F  E  :  N  A  D  P  G  N  F  S  I  Y  V  H  S  E  P  G  F  V  F  D  E  S  T  T  R  S  T  F  F  Y  N  R  Q  L  T  N  S  I  K  :  V  A  W  G  E  S  S  M  I  H  A  E  K  L  L  L  G  A  A  L  D  D  P  A  N  Q  R  F  V  L  L  S  D   </first_frame>
            <second_frame>  *  K  R  R  R  *  V  L  P  L  P  C  L  *  D  S  C  A  P  R  N  R  T  K  G  K  A  P  A  S  S  V  K  P  K  K  K  S  I  W  C  R  L  *  N  A  S  L  S  H  S  L  P  S  T  A  T  C  S  M  *  R  H  T :   R  R  S  K  E  N  S  N  L  *  R  R  S  R  R  R  R  W  L  W  R  R  P  P  E  C  L  S  E  T  C  C  G  C  G  G  S  C  W  F  W  F  L  L  L  F  V  C  W  L  F  *  S  F  K  T  T  L  F  P  I  R  N  F  P  L  L  L  L  Q  F  P  V  D  L  E  L  F  I  I  L  A  I  P  K  L  R  S  S  F  *  C  G  G  I  C  L  S  I  S  F  G  E  I  S  L  R :   M  L  T  L  A  I  F  P  Y  M  Y  I  R  S  L  V  L  F  L  M  S  L  Q  Q  D  Q  L  S  F  I  I  A  N  *  Q  I  A  S  R :   *  L  G  E  N  Q  V  *  S  T  Q  K  N  Y  Y  L  A  R  H  L  M  I  Q  Q  I  K  D  L  F  S  C  R  T  </second_frame>
            <third_frame>   E  N  D  V  V  R  F  F  P  F  L  V  F  E  T  V  V  H  Q  G  T  E  Q  K  A  K  H  Q  Q  A  V  *  N  Q  K  K  R  A  F  G  V  V  S  E  M  L  L  S  L  I  R  S  L  Q  P  P  P  V  Q  C  K  D  T   : R  E  G  A  K  R  I  Q  T  Y  E  E  E  V  G  G  G  D  G  Y  G  G  D  R  R  N  V  C  Q  K  R  V  V  V  V  V  E  V  V  G  S  G  F  S  Y  Y  L  C  V  G  F  S  K  A  S  K  L  L  S  F  R  F  G  T  F  L  F  Y  F  F  N  F  Q  *  I  S  S  S  L  L  Y  W  Q  S  Q  S  C  V  P  L  S  S  A  E  E  F  A  S  R  F  P  L  G  K  F  L  *   : E  C  *  P  W  Q  F  F  H  I  C  T  F  G  A  W  F  C  F  *  *  V  Y  N  K  I  N  F  L  L  *  S  P  I  D  K  *  H  Q   : G  S  L  G  R  I  K  Y  D  P  R  R  K  I  I  T  W  R  G  T  *  *  S  S  K  S  K  I  C  S  L  V  G  Q </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0320D04.2" strand="-"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="41624" stop="41433"/>
                    <exon start="41359" stop="41039"/>
                    <exon start="40766" stop="40650"/>
                    <exon start="39947" stop="39849"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>729</number_coding_nucleotides>
                  <number_encoded_amino_acids>243</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VKTTSLGSSPSLSLRQLCTKEQNKRQSTSKQCETKKKEHLVSSLKCFSLSFAPFNRHLFNVKTHEKEQREFKPMKKKSAAAMAMAATAGMSVRNVLWLWWKLLVLVSLTICVLAFLKLQNYSLSDSELSSSTSSISSRSRALYYTGNPKVAFLFLVRRNLPLDFLWGNFFENADPGNFSIYVHSEPGFVFDESTTRSTFFYNRQLTNSIKVAWGESSMIHAEKLLLGAALDDPANQRFVLLSD</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="41485" e_stop="41039"/>
            <exon e_start="40766" e_stop="40650"/>
            <exon e_start="39947" e_stop="39847"/>
            <exon e_start="38890" e_stop="38819"/>
            <exon e_start="38610" e_stop="38529"/>
            <exon e_start="37313" e_stop="37233"/>
            <exon e_start="36911" e_stop="36757"/>
            <exon e_start="36628" e_stop="36569"/>
            <exon e_start="36296" e_stop="36150"/>
            <exon e_start="35802" e_stop="35443"/>
            <exon e_start="35273" e_stop="35259"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.981" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.156" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.953" e_score="1.000"/>
          <exon-intron don_prob="0.880" acc_prob="0.920" e_score="1.000"/>
          <exon-intron don_prob="0.986" acc_prob="0.927" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.973" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.986" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.990" e_score="1.000"/>
          <exon-intron don_prob="0.976" acc_prob="0.999" e_score="0.993"/>
          <exon-intron don_prob="0.000" acc_prob="0.607" e_score="0.986"/>
          <exon-only e_score="0.800"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="41485" e_stop="41039" e_length="447"/>
          </exon>
          <intron i_serial="1" don_prob="0.981" acc_prob="0.998">
            <gDNA_intron_boundary i_start="41038" i_stop="40767" i_length="272"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="40766" e_stop="40650" e_length="117"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.156">
            <gDNA_intron_boundary i_start="40649" i_stop="39948" i_length="702"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="39947" e_stop="39847" e_length="101"/>
          </exon>
          <intron i_serial="3" don_prob="0.991" acc_prob="0.953">
            <gDNA_intron_boundary i_start="39846" i_stop="38891" i_length="956"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="38890" e_stop="38819" e_length="72"/>
          </exon>
          <intron i_serial="4" don_prob="0.880" acc_prob="0.920">
            <gDNA_intron_boundary i_start="38818" i_stop="38611" i_length="208"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="38610" e_stop="38529" e_length="82"/>
          </exon>
          <intron i_serial="5" don_prob="0.986" acc_prob="0.927">
            <gDNA_intron_boundary i_start="38528" i_stop="37314" i_length="1215"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="37313" e_stop="37233" e_length="81"/>
          </exon>
          <intron i_serial="6" don_prob="0.999" acc_prob="0.973">
            <gDNA_intron_boundary i_start="37232" i_stop="36912" i_length="321"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="36911" e_stop="36757" e_length="155"/>
          </exon>
          <intron i_serial="7" don_prob="0.000" acc_prob="0.986">
            <gDNA_intron_boundary i_start="36756" i_stop="36629" i_length="128"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="36628" e_stop="36569" e_length="60"/>
          </exon>
          <intron i_serial="8" don_prob="0.991" acc_prob="0.990">
            <gDNA_intron_boundary i_start="36568" i_stop="36297" i_length="272"/>
          </intron>
          <exon e_serial="9" e_score="0.993">
            <gDNA_exon_boundary e_start="36296" e_stop="36150" e_length="147"/>
          </exon>
          <intron i_serial="9" don_prob="0.976" acc_prob="0.999">
            <gDNA_intron_boundary i_start="36149" i_stop="35803" i_length="347"/>
          </intron>
          <exon e_serial="10" e_score="0.986">
            <gDNA_exon_boundary e_start="35802" e_stop="35443" e_length="360"/>
          </exon>
          <intron i_serial="10" don_prob="0.000" acc_prob="0.607">
            <gDNA_intron_boundary i_start="35442" i_stop="35274" i_length="169"/>
          </intron>
          <exon e_serial="11" e_score="0.800">
            <gDNA_exon_boundary e_start="35273" e_stop="35259" e_length="15"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="41485" stop="41039"/>
              <exon start="40766" stop="40650"/>
              <exon start="39947" stop="39847"/>
              <exon start="38890" stop="38819"/>
              <exon start="38610" stop="38529"/>
              <exon start="37313" stop="37236"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E702392" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="41404" stop="41039"/>
              <exon start="40766" stop="40650"/>
              <exon start="39947" stop="39847"/>
              <exon start="38890" stop="38819"/>
              <exon start="38610" stop="38529"/>
              <exon start="37313" stop="37233"/>
              <exon start="36911" stop="36878"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E719553" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="41317" stop="41039"/>
              <exon start="40766" stop="40650"/>
              <exon start="39947" stop="39847"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E248377" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36891" stop="36757"/>
              <exon start="36628" stop="36569"/>
              <exon start="36296" stop="36150"/>
              <exon start="35802" stop="35443"/>
              <exon start="35273" stop="35259"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E539047" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCTCTCTCTCATTCGCTCCCTTCAACCGCCACCTGTTCAATGTAAAGACACACATATATATGTGCATTTATTTATACACAGAGAGAAAGATAGAGTGCAAATCTCTTTTTTCTTTTAAATTTTCAGGAGAAGGAGCAAAGAGAATTCAAACCTATGAAGAAGAAGTCGGCGGCGGCGATGGCTATGGCGGCGACCGCCGGAATGTCTGTCAGAAACGTGTTGTGGTTGTGGTGGAAGTTGTTGGTTCTGGTTTCTCTTACTATTTGTGTGTTGGCTTTTCTAAAGCTTCAAAACTACTCTCTTTCCGATTCGGAACTTTCCTCTTCTACTTCTTCAATTTCCAGTAGATCTCGAGCTCTTTATTATACTGGCAATCCCAAAGTTGCGTTCCTCTTTCTAGTGCGGAGGAATTTGCCTCTCGATTTCCTTTGGGGAAATTTCTTTGAG : AATGCTGACCCTGGCAATTTTTCCATATATGTACATTCGGAGCCTGGTTTTGTTTTTGATGAGTCTACAACAAGATCAACTTTCTTTTATAATCGCCAATTGACAAATAGCATCAAG : GTAGCTTGGGGAGAATCAAGTATGATCCACGCAGAAAAATTATTACTTGGCGCGGCACTTGATGATCCAGCAAATCAAAGATTTGTTCTCTTGTCGGACAG : CTGTGTCCCACTGTACAACTTTAGCTTCATATACAACTACTTGATGGCTTCTCCAAGGAGCTTTGTGGACAG : TTTTCTTGATAAAAAGGATGTCCGCTACAACCCAAGGATGTCACCCTATATACCAATGAGCAAATGGCGAAAAGGGTCACAG : TGGATCACTTTAATCAGGAAGCATGCAGAAGTGGTGGCAGATGATGATGCTGTGTTTCCAGTCTTCAAGATGTTCTGCAAG : AGACGTCCAGCGCTGGAAGCCAGTAAGGGAAAAAAGAATATTGTAAGTCAAGAGTGCCTTCTGCTAAGAAGATGCATTTGAATATTGTGCGTTGGCCGTGATGCTGTGCCGACTTCCTCAGTTGGCTCCTCTCTCTTGGCCCCATCCTTTCTTGC : AAACTTCAGAAGCAGCACAACTGCATTCCAGATGAACACTATGTGCAGACATTGTTGGCG : ATACATGGGCTTGAAGGAGAACTTGAACGTAGAACGATAACCTATACAGAGTGGAATGAATCTGTGACAAATATGGAGAAAAAGGGTTGGCATCCCATAACATTTAGCTATGCAGATGCTGGGCCTGTACAGATCAAGAGAATAAAG : GATATCCGCAATGTTTACTATGAAAGCGAGTACAGGACAGAGTGGTGTCGGAATAATTCTACGCTAGCCCCCTGTTTTCTGATTGCAAGGAAATTCTCAGGAGGGGCTGCAATGCGCCTCTTGAGTGAAGGAATAGTTTCTCCATTCGACGCCTCCTCTATGATGAATTTGACACCATGATATATTAATTAGTCTCTATTTATTAGTTTTTATTTGTCATATACTTTGATGAGAGGATAAGTTGCCAATTATAACTGGAGTGTGTCACAACACCTCTAGCTTACTGATTTAGGAAATATACACAAGGAAGCTGATCTAAGTATGGCTCATGTAAAACAGTACTGTAGATATTTTAAAAGA : ATGCTATAAAAAAAG</gDNA_template>
            <first_frame> S  L  S  H  S  L  P  S  T  A  T  C  S  M  *  R  H  T  Y  I  C  A  F  I  Y  T  Q  R  E  R  *  S  A  N  L  F  F  L  L  N  F  Q  E  K  E  Q  R  E  F  K  P  M  K  K  K  S  A  A  A  M  A  M  A  A  T  A  G  M  S  V  R  N  V  L  W  L  W  W  K  L  L  V  L  V  S  L  T  I  C  V  L  A  F  L  K  L  Q  N  Y  S  L  S  D  S  E  L  S  S  S  T  S  S  I  S  S  R  S  R  A  L  Y  Y  T  G  N  P  K  V  A  F  L  F  L  V  R  R  N  L  P  L  D  F  L  W  G  N  F  F  E  :  N  A  D  P  G  N  F  S  I  Y  V  H  S  E  P  G  F  V  F  D  E  S  T  T  R  S  T  F  F  Y  N  R  Q  L  T  N  S  I  K  :  V  A  W  G  E  S  S  M  I  H  A  E  K  L  L  L  G  A  A  L  D  D  P  A  N  Q  R  F  V  L  L  S  D  S :   C  V  P  L  Y  N  F  S  F  I  Y  N  Y  L  M  A  S  P  R  S  F  V  D  S :   F  L  D  K  K  D  V  R  Y  N  P  R  M  S  P  Y  I  P  M  S  K  W  R  K  G  S  Q  :  W  I  T  L  I  R  K  H  A  E  V  V  A  D  D  D  A  V  F  P  V  F  K  M  F  C  K  :  R  R  P  A  L  E  A  S  K  G  K  K  N  I  V  S  Q  E  C  L  L  L  R  R  C  I  *  I  L  C  V  G  R  D  A  V  P  T  S  S  V  G  S  S  L  L  A  P  S  F  L  A :   N  F  R  S  S  T  T  A  F  Q  M  N  T  M  C  R  H  C  W  R :   Y  M  G  L  K  E  N  L  N  V  E  R  *  P  I  Q  S  G  M  N  L  *  Q  I  W  R  K  R  V  G  I  P  *  H  L  A  M  Q  M  L  G  L  Y  R  S  R  E  *  R :   I  S  A  M  F  T  M  K  A  S  T  G  Q  S  G  V  G  I  I  L  R  *  P  P  V  F  *  L  Q  G  N  S  Q  E  G  L  Q  C  A  S  *  V  K  E  *  F  L  H  S  T  P  P  L  *  *  I  *  H  H  D  I  L  I  S  L  Y  L  L  V  F  I  C  H  I  L  *  *  E  D  K  L  P  I  I  T  G  V  C  H  N  T  S  S  L  L  I  *  E  I  Y  T  R  K  L  I  *  V  W  L  M  *  N  S  T  V  D  I  L  K  E :   C  Y  K  K   </first_frame>
            <second_frame>  L  S  L  I  R  S  L  Q  P  P  P  V  Q  C  K  D  T  H  I  Y  V  H  L  F  I  H  R  E  K  D  R  V  Q  I  S  F  F  F  *  I  F  R  R  R  S  K  E  N  S  N  L  *  R  R  S  R  R  R  R  W  L  W  R  R  P  P  E  C  L  S  E  T  C  C  G  C  G  G  S  C  W  F  W  F  L  L  L  F  V  C  W  L  F  *  S  F  K  T  T  L  F  P  I  R  N  F  P  L  L  L  L  Q  F  P  V  D  L  E  L  F  I  I  L  A  I  P  K  L  R  S  S  F  *  C  G  G  I  C  L  S  I  S  F  G  E  I  S  L  R :   M  L  T  L  A  I  F  P  Y  M  Y  I  R  S  L  V  L  F  L  M  S  L  Q  Q  D  Q  L  S  F  I  I  A  N  *  Q  I  A  S  R :   *  L  G  E  N  Q  V  *  S  T  Q  K  N  Y  Y  L  A  R  H  L  M  I  Q  Q  I  K  D  L  F  S  C  R  T   : A  V  S  H  C  T  T  L  A  S  Y  T  T  T  *  W  L  L  Q  G  A  L  W  T   : V  F  L  I  K  R  M  S  A  T  T  Q  G  C  H  P  I  Y  Q  *  A  N  G  E  K  G  H  S :   G  S  L  *  S  G  S  M  Q  K  W  W  Q  M  M  M  L  C  F  Q  S  S  R  C  S  A  R :   D  V  Q  R  W  K  P  V  R  E  K  R  I  L  *  V  K  S  A  F  C  *  E  D  A  F  E  Y  C  A  L  A  V  M  L  C  R  L  P  Q  L  A  P  L  S  W  P  H  P  F  L   : Q  T  S  E  A  A  Q  L  H  S  R  *  T  L  C  A  D  I  V  G   : D  T  W  A  *  R  R  T  *  T  *  N  D  N  L  Y  R  V  E  *  I  C  D  K  Y  G  E  K  G  L  A  S  H  N  I  *  L  C  R  C  W  A  C  T  D  Q  E  N  K   : G  Y  P  Q  C  L  L  *  K  R  V  Q  D  R  V  V  S  E  *  F  Y  A  S  P  L  F  S  D  C  K  E  I  L  R  R  G  C  N  A  P  L  E  *  R  N  S  F  S  I  R  R  L  L  Y  D  E  F  D  T  M  I  Y  *  L  V  S  I  Y  *  F  L  F  V  I  Y  F  D  E  R  I  S  C  Q  L  *  L  E  C  V  T  T  P  L  A  Y  *  F  R  K  Y  T  Q  G  S  *  S  K  Y  G  S  C  K  T  V  L  *  I  F  *  K   : N  A  I  K  K  </second_frame>
            <third_frame>   S  L  S  F  A  P  F  N  R  H  L  F  N  V  K  T  H  I  Y  M  C  I  Y  L  Y  T  E  R  K  I  E  C  K  S  L  F  S  F  K  F  S  G  E  G  A  K  R  I  Q  T  Y  E  E  E  V  G  G  G  D  G  Y  G  G  D  R  R  N  V  C  Q  K  R  V  V  V  V  V  E  V  V  G  S  G  F  S  Y  Y  L  C  V  G  F  S  K  A  S  K  L  L  S  F  R  F  G  T  F  L  F  Y  F  F  N  F  Q  *  I  S  S  S  L  L  Y  W  Q  S  Q  S  C  V  P  L  S  S  A  E  E  F  A  S  R  F  P  L  G  K  F  L  *   : E  C  *  P  W  Q  F  F  H  I  C  T  F  G  A  W  F  C  F  *  *  V  Y  N  K  I  N  F  L  L  *  S  P  I  D  K  *  H  Q   : G  S  L  G  R  I  K  Y  D  P  R  R  K  I  I  T  W  R  G  T  *  *  S  S  K  S  K  I  C  S  L  V  G  Q  :  L  C  P  T  V  Q  L  *  L  H  I  Q  L  L  D  G  F  S  K  E  L  C  G  Q  :  F  S  *  *  K  G  C  P  L  Q  P  K  D  V  T  L  Y  T  N  E  Q  M  A  K  R  V  T   : V  D  H  F  N  Q  E  A  C  R  S  G  G  R  *  *  C  C  V  S  S  L  Q  D  V  L  Q   : E  T  S  S  A  G  S  Q  *  G  K  K  E  Y  C  K  S  R  V  P  S  A  K  K  M  H  L  N  I  V  R  W  P  *  C  C  A  D  F  L  S  W  L  L  S  L  G  P  I  L  S  C  :  K  L  Q  K  Q  H  N  C  I  P  D  E  H  Y  V  Q  T  L  L  A  :  I  H  G  L  E  G  E  L  E  R  R  T  I  T  Y  T  E  W  N  E  S  V  T  N  M  E  K  K  G  W  H  P  I  T  F  S  Y  A  D  A  G  P  V  Q  I  K  R  I  K  :  D  I  R  N  V  Y  Y  E  S  E  Y  R  T  E  W  C  R  N  N  S  T  L  A  P  C  F  L  I  A  R  K  F  S  G  G  A  A  M  R  L  L  S  E  G  I  V  S  P  F  D  A  S  S  M  M  N  L  T  P  *  Y  I  N  *  S  L  F  I  S  F  Y  L  S  Y  T  L  M  R  G  *  V  A  N  Y  N  W  S  V  S  Q  H  L  *  L  T  D  L  G  N  I  H  K  E  A  D  L  S  M  A  H  V  K  Q  Y  C  R  Y  F  K  R  :  M  L  *  K  K </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0320D04.2" strand="-"/>
                <serials PGL_serial="6" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="41392" stop="41039"/>
                    <exon start="40766" stop="40650"/>
                    <exon start="39947" stop="39847"/>
                    <exon start="38890" stop="38819"/>
                    <exon start="38610" stop="38529"/>
                    <exon start="37313" stop="37233"/>
                    <exon start="36911" stop="36831"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>885</number_coding_nucleotides>
                  <number_encoded_amino_acids>295</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SANLFFLLNFQEKEQREFKPMKKKSAAAMAMAATAGMSVRNVLWLWWKLLVLVSLTICVLAFLKLQNYSLSDSELSSSTSSISSRSRALYYTGNPKVAFLFLVRRNLPLDFLWGNFFENADPGNFSIYVHSEPGFVFDESTTRSTFFYNRQLTNSIKVAWGESSMIHAEKLLLGAALDDPANQRFVLLSDSCVPLYNFSFIYNYLMASPRSFVDSFLDKKDVRYNPRMSPYIPMSKWRKGSQWITLIRKHAEVVADDDAVFPVFKMFCKRRPALEASKGKKNIVSQECLLLRRCI*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0320D04.2" strand="-"/>
                <serials PGL_serial="6" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="36810" stop="36757"/>
                    <exon start="36628" stop="36569"/>
                    <exon start="36296" stop="36150"/>
                    <exon start="35802" stop="35623"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>438</number_coding_nucleotides>
                  <number_encoded_amino_acids>146</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CCADFLSWLLSLGPILSCKLQKQHNCIPDEHYVQTLLAIHGLEGELERRTITYTEWNESVTNMEKKGWHPITFSYADAGPVQIKRIKDIRNVYYESEYRTEWCRNNSTLAPCFLIARKFSGGAAMRLLSEGIVSPFDASSMMNLTP*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="38645" e_stop="38529"/>
            <exon e_start="37313" e_stop="37233"/>
            <exon e_start="36911" e_stop="36757"/>
            <exon e_start="36628" e_stop="36569"/>
            <exon e_start="36296" e_stop="36150"/>
            <exon e_start="35802" e_stop="35443"/>
            <exon e_start="35273" e_stop="35259"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.986" acc_prob="0.927" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.973" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.986" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.990" e_score="1.000"/>
          <exon-intron don_prob="0.976" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.607" e_score="0.986"/>
          <exon-only e_score="0.800"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="38645" e_stop="38529" e_length="117"/>
          </exon>
          <intron i_serial="1" don_prob="0.986" acc_prob="0.927">
            <gDNA_intron_boundary i_start="38528" i_stop="37314" i_length="1215"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="37313" e_stop="37233" e_length="81"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.973">
            <gDNA_intron_boundary i_start="37232" i_stop="36912" i_length="321"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="36911" e_stop="36757" e_length="155"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.986">
            <gDNA_intron_boundary i_start="36756" i_stop="36629" i_length="128"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="36628" e_stop="36569" e_length="60"/>
          </exon>
          <intron i_serial="4" don_prob="0.991" acc_prob="0.990">
            <gDNA_intron_boundary i_start="36568" i_stop="36297" i_length="272"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="36296" e_stop="36150" e_length="147"/>
          </exon>
          <intron i_serial="5" don_prob="0.976" acc_prob="0.999">
            <gDNA_intron_boundary i_start="36149" i_stop="35803" i_length="347"/>
          </intron>
          <exon e_serial="6" e_score="0.986">
            <gDNA_exon_boundary e_start="35802" e_stop="35443" e_length="360"/>
          </exon>
          <intron i_serial="6" don_prob="0.000" acc_prob="0.607">
            <gDNA_intron_boundary i_start="35442" i_stop="35274" i_length="169"/>
          </intron>
          <exon e_serial="7" e_score="0.800">
            <gDNA_exon_boundary e_start="35273" e_stop="35259" e_length="15"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="38645" stop="38529"/>
              <exon start="37313" stop="37233"/>
              <exon start="36911" stop="36757"/>
              <exon start="36628" stop="36569"/>
              <exon start="36296" stop="36150"/>
              <exon start="35802" stop="35544"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E539050" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="38644" stop="38529"/>
              <exon start="37313" stop="37233"/>
              <exon start="36911" stop="36757"/>
              <exon start="36628" stop="36569"/>
              <exon start="36296" stop="36214"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E279639" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36891" stop="36757"/>
              <exon start="36628" stop="36569"/>
              <exon start="36296" stop="36150"/>
              <exon start="35802" stop="35443"/>
              <exon start="35273" stop="35259"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E539047" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CAACATTGGATGAATGAGGTCTGTTTGTCTTCCAGTTTTCTTGATAAAAAGGATGTCCGCTACAACCCAAGGATGTCACCCTATATACCAATGAGCAAATGGCGAAAAGGGTCACAG : TGGATCACTTTAATCAGGAAGCATGCAGAAGTGGTGGCAGATGATGATGCTGTGTTTCCAGTCTTCAAGATGTTCTGCAAG : AGACGTCCAGCGCTGGAAGCCAGTAAGGGAAAAAAGAATATTGTAAGTCAAGAGTGCCTTCTGCTAAGAAGATGCATTTGAATATTGTGCGTTGGCCGTGATGCTGTGCCGACTTCCTCAGTTGGCTCCTCTCTCTTGGCCCCATCCTTTCTTGC : AAACTTCAGAAGCAGCACAACTGCATTCCAGATGAACACTATGTGCAGACATTGTTGGCG : ATACATGGGCTTGAAGGAGAACTTGAACGTAGAACGATAACCTATACAGAGTGGAATGAATCTGTGACAAATATGGAGAAAAAGGGTTGGCATCCCATAACATTTAGCTATGCAGATGCTGGGCCTGTACAGATCAAGAGAATAAAG : GATATCCGCAATGTTTACTATGAAAGCGAGTACAGGACAGAGTGGTGTCGGAATAATTCTACGCTAGCCCCCTGTTTTCTGATTGCAAGGAAATTCTCAGGAGGGGCTGCAATGCGCCTCTTGAGTGAAGGAATAGTTTCTCCATTCGACGCCTCCTCTATGATGAATTTGACACCATGATATATTAATTAGTCTCTATTTATTAGTTTTTATTTGTCATATACTTTGATGAGAGGATAAGTTGCCAATTATAACTGGAGTGTGTCACAACACCTCTAGCTTACTGATTTAGGAAATATACACAAGGAAGCTGATCTAAGTATGGCTCATGTAAAACAGTACTGTAGATATTTTAAAAGA : ATGCTATAAAAAAAG</gDNA_template>
            <first_frame> Q  H  W  M  N  E  V  C  L  S  S  S  F  L  D  K  K  D  V  R  Y  N  P  R  M  S  P  Y  I  P  M  S  K  W  R  K  G  S  Q  :  W  I  T  L  I  R  K  H  A  E  V  V  A  D  D  D  A  V  F  P  V  F  K  M  F  C  K  :  R  R  P  A  L  E  A  S  K  G  K  K  N  I  V  S  Q  E  C  L  L  L  R  R  C  I  *  I  L  C  V  G  R  D  A  V  P  T  S  S  V  G  S  S  L  L  A  P  S  F  L  A :   N  F  R  S  S  T  T  A  F  Q  M  N  T  M  C  R  H  C  W  R :   Y  M  G  L  K  E  N  L  N  V  E  R  *  P  I  Q  S  G  M  N  L  *  Q  I  W  R  K  R  V  G  I  P  *  H  L  A  M  Q  M  L  G  L  Y  R  S  R  E  *  R :   I  S  A  M  F  T  M  K  A  S  T  G  Q  S  G  V  G  I  I  L  R  *  P  P  V  F  *  L  Q  G  N  S  Q  E  G  L  Q  C  A  S  *  V  K  E  *  F  L  H  S  T  P  P  L  *  *  I  *  H  H  D  I  L  I  S  L  Y  L  L  V  F  I  C  H  I  L  *  *  E  D  K  L  P  I  I  T  G  V  C  H  N  T  S  S  L  L  I  *  E  I  Y  T  R  K  L  I  *  V  W  L  M  *  N  S  T  V  D  I  L  K  E :   C  Y  K  K   </first_frame>
            <second_frame>  N  I  G  *  M  R  S  V  C  L  P  V  F  L  I  K  R  M  S  A  T  T  Q  G  C  H  P  I  Y  Q  *  A  N  G  E  K  G  H  S :   G  S  L  *  S  G  S  M  Q  K  W  W  Q  M  M  M  L  C  F  Q  S  S  R  C  S  A  R :   D  V  Q  R  W  K  P  V  R  E  K  R  I  L  *  V  K  S  A  F  C  *  E  D  A  F  E  Y  C  A  L  A  V  M  L  C  R  L  P  Q  L  A  P  L  S  W  P  H  P  F  L   : Q  T  S  E  A  A  Q  L  H  S  R  *  T  L  C  A  D  I  V  G   : D  T  W  A  *  R  R  T  *  T  *  N  D  N  L  Y  R  V  E  *  I  C  D  K  Y  G  E  K  G  L  A  S  H  N  I  *  L  C  R  C  W  A  C  T  D  Q  E  N  K   : G  Y  P  Q  C  L  L  *  K  R  V  Q  D  R  V  V  S  E  *  F  Y  A  S  P  L  F  S  D  C  K  E  I  L  R  R  G  C  N  A  P  L  E  *  R  N  S  F  S  I  R  R  L  L  Y  D  E  F  D  T  M  I  Y  *  L  V  S  I  Y  *  F  L  F  V  I  Y  F  D  E  R  I  S  C  Q  L  *  L  E  C  V  T  T  P  L  A  Y  *  F  R  K  Y  T  Q  G  S  *  S  K  Y  G  S  C  K  T  V  L  *  I  F  *  K   : N  A  I  K  K  </second_frame>
            <third_frame>   T  L  D  E  *  G  L  F  V  F  Q  F  S  *  *  K  G  C  P  L  Q  P  K  D  V  T  L  Y  T  N  E  Q  M  A  K  R  V  T   : V  D  H  F  N  Q  E  A  C  R  S  G  G  R  *  *  C  C  V  S  S  L  Q  D  V  L  Q   : E  T  S  S  A  G  S  Q  *  G  K  K  E  Y  C  K  S  R  V  P  S  A  K  K  M  H  L  N  I  V  R  W  P  *  C  C  A  D  F  L  S  W  L  L  S  L  G  P  I  L  S  C  :  K  L  Q  K  Q  H  N  C  I  P  D  E  H  Y  V  Q  T  L  L  A  :  I  H  G  L  E  G  E  L  E  R  R  T  I  T  Y  T  E  W  N  E  S  V  T  N  M  E  K  K  G  W  H  P  I  T  F  S  Y  A  D  A  G  P  V  Q  I  K  R  I  K  :  D  I  R  N  V  Y  Y  E  S  E  Y  R  T  E  W  C  R  N  N  S  T  L  A  P  C  F  L  I  A  R  K  F  S  G  G  A  A  M  R  L  L  S  E  G  I  V  S  P  F  D  A  S  S  M  M  N  L  T  P  *  Y  I  N  *  S  L  F  I  S  F  Y  L  S  Y  T  L  M  R  G  *  V  A  N  Y  N  W  S  V  S  Q  H  L  *  L  T  D  L  G  N  I  H  K  E  A  D  L  S  M  A  H  V  K  Q  Y  C  R  Y  F  K  R  :  M  L  *  K  K </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0320D04.2" strand="-"/>
                <serials PGL_serial="6" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="36810" stop="36757"/>
                    <exon start="36628" stop="36569"/>
                    <exon start="36296" stop="36150"/>
                    <exon start="35802" stop="35623"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>438</number_coding_nucleotides>
                  <number_encoded_amino_acids>146</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CCADFLSWLLSLGPILSCKLQKQHNCIPDEHYVQTLLAIHGLEGELERRTITYTEWNESVTNMEKKGWHPITFSYADAGPVQIKRIKDIRNVYYESEYRTEWCRNNSTLAPCFLIARKFSGGAAMRLLSEGIVSPFDASSMMNLTP*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0320D04.2" strand="-"/>
                <serials PGL_serial="6" AGS_serial="3" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="38645" stop="38529"/>
                    <exon start="37313" stop="37233"/>
                    <exon start="36911" stop="36831"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>276</number_coding_nucleotides>
                  <number_encoded_amino_acids>92</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QHWMNEVCLSSSFLDKKDVRYNPRMSPYIPMSKWRKGSQWITLIRKHAEVVADDDAVFPVFKMFCKRRPALEASKGKKNIVSQECLLLRRCI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="-" PGL_start="48774" PGL_stop="47538"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="48774" e_stop="47538"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.991"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.991">
            <gDNA_exon_boundary e_start="48774" e_stop="47538" e_length="1237"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="48774" stop="48175"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E395101" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="48774" stop="48233"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E395097" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="48773" stop="48163"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E276594" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="48773" stop="48426"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E275681" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="48278" stop="47538"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E344570" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTTCTTAAAGTGTTTGGTTGTGTCTGTTTTGTTCATGTTCCTCAGGTTAAACATGACAAACTTGACAAGAAAGCAATCATAGGCATCCATGTGGGTTACAGTGAAGTTTCTAAAGCCTACAAGGTTTATCATCCTCAGACAGGAAAGATGACAATTACAAGAGATGTTCATTTTAGTGAGAATGAACAGTGGAACTGGAAGAACTCTCAGAAATCAGGAAGACGCTCTCTAGAAGCAAACATCAGCCCTCCTGAAGAGCAAAAAATAGAACACTGGCAGCAAAAACTAGAAGATGATCATCCAGTCAAGGGGAGAAGATTGTTGTCAGATATCTATCAGAGGTATAATGTCGCCATCTATGAACCTGCTGGTCCAGTAGAAGCTTTGCAAGACCCAAAATGGAAGAAAGCAATGGAGGAGGAAATCTCCATGATTGAGAAAAATAAAACTTGGGTGCTTGTCAACAAACCTGAAGATAGAAAAGTCATTGGTGTGAGATGGTCTTCAGAACAAAGTTAAATGCAGATAGTTCCATCAACAAATACAAGACGAGGCTTGTAGTTAAAGGGTATGCACAAATTTATGGTGTCGATTACTCTGACACCTTTTCTCCTGTTGCAAGATTAGACACAATCAGGTTGCTACCCGCAATAGCAGCACAAATGGATTCTCAGATAGTGATTAGGCCAGATCCGCAGATGATATGAGAAGTACCTCTCGCCATTGTTTCAGCCTAGGTTCAGGAATATTCTCATGGTCATCTAAGAAACAGGAAATTGTTGCACAATCAACAGCAGCAACAGGAGCAGTAAACCAAGTCTTGTGGCTTAGAAAGATCATGTATGATTTACATGTGGAACAGAAGGAAAGTACTAGCATTCTTGTCGACAACCAGGCAGCTATTGCAATCTCAAACAATCCGGTGTTTCACAAGAAGACCAAGCATTTCAACATCAAGTTCTATTTTCTGAGAGAAGTACAGCAAAGGGGAGAAGTAACTCTAGTCTATACTAAGACTTTACCGATCAGCAAATTCGAGCTTCTTAGACAGAAAATTGGAGTTTGCAGTATCCAAAGCAAGGAGGAGTGCAAGGAATCTGTTTTGAACCGCAGTAAATTTAATTTTACTGCCTATGTTTTAAGTTAGACTTAGTCAATTAGTTGTTAGTCATGCTTTCCTATTATTTAGGAGTTGTTTTAGTGACTGCTAGATCATGCATTATTATTAGTGACTGCT</gDNA_template>
            <first_frame> F  L  K  V  F  G  C  V  C  F  V  H  V  P  Q  V  K  H  D  K  L  D  K  K  A  I  I  G  I  H  V  G  Y  S  E  V  S  K  A  Y  K  V  Y  H  P  Q  T  G  K  M  T  I  T  R  D  V  H  F  S  E  N  E  Q  W  N  W  K  N  S  Q  K  S  G  R  R  S  L  E  A  N  I  S  P  P  E  E  Q  K  I  E  H  W  Q  Q  K  L  E  D  D  H  P  V  K  G  R  R  L  L  S  D  I  Y  Q  R  Y  N  V  A  I  Y  E  P  A  G  P  V  E  A  L  Q  D  P  K  W  K  K  A  M  E  E  E  I  S  M  I  E  K  N  K  T  W  V  L  V  N  K  P  E  D  R  K  V  I  G  V  R  W  S  S  E  Q  S  *  M  Q  I  V  P  S  T  N  T  R  R  G  L  *  L  K  G  M  H  K  F  M  V  S  I  T  L  T  P  F  L  L  L  Q  D  *  T  Q  S  G  C  Y  P  Q  *  Q  H  K  W  I  L  R  *  *  L  G  Q  I  R  R  *  Y  E  K  Y  L  S  P  L  F  Q  P  R  F  R  N  I  L  M  V  I  *  E  T  G  N  C  C  T  I  N  S  S  N  R  S  S  K  P  S  L  V  A  *  K  D  H  V  *  F  T  C  G  T  E  G  K  Y  *  H  S  C  R  Q  P  G  S  Y  C  N  L  K  Q  S  G  V  S  Q  E  D  Q  A  F  Q  H  Q  V  L  F  S  E  R  S  T  A  K  G  R  S  N  S  S  L  Y  *  D  F  T  D  Q  Q  I  R  A  S  *  T  E  N  W  S  L  Q  Y  P  K  Q  G  G  V  Q  G  I  C  F  E  P  Q  *  I  *  F  Y  C  L  C  F  K  L  D  L  V  N  *  L  L  V  M  L  S  Y  Y  L  G  V  V  L  V  T  A  R  S  C  I  I  I  S  D  C  </first_frame>
            <second_frame>  F  L  K  C  L  V  V  S  V  L  F  M  F  L  R  L  N  M  T  N  L  T  R  K  Q  S  *  A  S  M  W  V  T  V  K  F  L  K  P  T  R  F  I  I  L  R  Q  E  R  *  Q  L  Q  E  M  F  I  L  V  R  M  N  S  G  T  G  R  T  L  R  N  Q  E  D  A  L  *  K  Q  T  S  A  L  L  K  S  K  K  *  N  T  G  S  K  N  *  K  M  I  I  Q  S  R  G  E  D  C  C  Q  I  S  I  R  G  I  M  S  P  S  M  N  L  L  V  Q  *  K  L  C  K  T  Q  N  G  R  K  Q  W  R  R  K  S  P  *  L  R  K  I  K  L  G  C  L  S  T  N  L  K  I  E  K  S  L  V  *  D  G  L  Q  N  K  V  K  C  R  *  F  H  Q  Q  I  Q  D  E  A  C  S  *  R  V  C  T  N  L  W  C  R  L  L  *  H  L  F  S  C  C  K  I  R  H  N  Q  V  A  T  R  N  S  S  T  N  G  F  S  D  S  D  *  A  R  S  A  D  D  M  R  S  T  S  R  H  C  F  S  L  G  S  G  I  F  S  W  S  S  K  K  Q  E  I  V  A  Q  S  T  A  A  T  G  A  V  N  Q  V  L  W  L  R  K  I  M  Y  D  L  H  V  E  Q  K  E  S  T  S  I  L  V  D  N  Q  A  A  I  A  I  S  N  N  P  V  F  H  K  K  T  K  H  F  N  I  K  F  Y  F  L  R  E  V  Q  Q  R  G  E  V  T  L  V  Y  T  K  T  L  P  I  S  K  F  E  L  L  R  Q  K  I  G  V  C  S  I  Q  S  K  E  E  C  K  E  S  V  L  N  R  S  K  F  N  F  T  A  Y  V  L  S  *  T  *  S  I  S  C  *  S  C  F  P  I  I  *  E  L  F  *  *  L  L  D  H  A  L  L  L  V  T  A </second_frame>
            <third_frame>   S  *  S  V  W  L  C  L  F  C  S  C  S  S  G  *  T  *  Q  T  *  Q  E  S  N  H  R  H  P  C  G  L  Q  *  S  F  *  S  L  Q  G  L  S  S  S  D  R  K  D  D  N  Y  K  R  C  S  F  *  *  E  *  T  V  E  L  E  E  L  S  E  I  R  K  T  L  S  R  S  K  H  Q  P  S  *  R  A  K  N  R  T  L  A  A  K  T  R  R  *  S  S  S  Q  G  E  K  I  V  V  R  Y  L  S  E  V  *  C  R  H  L  *  T  C  W  S  S  R  S  F  A  R  P  K  M  E  E  S  N  G  G  G  N  L  H  D  *  E  K  *  N  L  G  A  C  Q  Q  T  *  R  *  K  S  H  W  C  E  M  V  F  R  T  K  L  N  A  D  S  S  I  N  K  Y  K  T  R  L  V  V  K  G  Y  A  Q  I  Y  G  V  D  Y  S  D  T  F  S  P  V  A  R  L  D  T  I  R  L  L  P  A  I  A  A  Q  M  D  S  Q  I  V  I  R  P  D  P  Q  M  I  *  E  V  P  L  A  I  V  S  A  *  V  Q  E  Y  S  H  G  H  L  R  N  R  K  L  L  H  N  Q  Q  Q  Q  Q  E  Q  *  T  K  S  C  G  L  E  R  S  C  M  I  Y  M  W  N  R  R  K  V  L  A  F  L  S  T  T  R  Q  L  L  Q  S  Q  T  I  R  C  F  T  R  R  P  S  I  S  T  S  S  S  I  F  *  E  K  Y  S  K  G  E  K  *  L  *  S  I  L  R  L  Y  R  S  A  N  S  S  F  L  D  R  K  L  E  F  A  V  S  K  A  R  R  S  A  R  N  L  F  *  T  A  V  N  L  I  L  L  P  M  F  *  V  R  L  S  Q  L  V  V  S  H  A  F  L  L  F  R  S  C  F  S  D  C  *  I  M  H  Y  Y  *  *  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0320D04.2" strand="-"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="48774" stop="48256"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>516</number_coding_nucleotides>
                  <number_encoded_amino_acids>172</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FLKVFGCVCFVHVPQVKHDKLDKKAIIGIHVGYSEVSKAYKVYHPQTGKMTITRDVHFSENEQWNWKNSQKSGRRSLEANISPPEEQKIEHWQQKLEDDHPVKGRRLLSDIYQRYNVAIYEPAGPVEALQDPKWKKAMEEEISMIEKNKTWVLVNKPEDRKVIGVRWSSEQS*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0320D04.2" strand="-"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="48089" stop="47628"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>459</number_coding_nucleotides>
                  <number_encoded_amino_acids>153</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ARSADDMRSTSRHCFSLGSGIFSWSSKKQEIVAQSTAATGAVNQVLWLRKIMYDLHVEQKESTSILVDNQAAIAISNNPVFHKKTKHFNIKFYFLREVQQRGEVTLVYTKTLPISKFELLRQKIGVCSIQSKEECKESVLNRSKFNFTAYVLS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="-" PGL_start="61761" PGL_stop="51333"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="61761" e_stop="61337"/>
            <exon e_start="55416" e_stop="55272"/>
            <exon e_start="55200" e_stop="55144"/>
            <exon e_start="54427" e_stop="54308"/>
            <exon e_start="54214" e_stop="54110"/>
            <exon e_start="53969" e_stop="53746"/>
            <exon e_start="53657" e_stop="53591"/>
            <exon e_start="53505" e_stop="53351"/>
            <exon e_start="53168" e_stop="52904"/>
            <exon e_start="52742" e_stop="52548"/>
            <exon e_start="52398" e_stop="52319"/>
            <exon e_start="51593" e_stop="51531"/>
            <exon e_start="51399" e_stop="51333"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.939" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.120" e_score="1.000"/>
          <exon-intron don_prob="0.969" acc_prob="0.963" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.918" e_score="1.000"/>
          <exon-intron don_prob="0.804" acc_prob="0.994" e_score="0.996"/>
          <exon-intron don_prob="0.997" acc_prob="0.137" e_score="1.000"/>
          <exon-intron don_prob="0.983" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.952" acc_prob="0.974" e_score="0.996"/>
          <exon-intron don_prob="0.999" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.978" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.942" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="0.955"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="61761" e_stop="61337" e_length="425"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.994">
            <gDNA_intron_boundary i_start="61336" i_stop="55417" i_length="5920"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="55416" e_stop="55272" e_length="145"/>
          </exon>
          <intron i_serial="2" don_prob="0.998" acc_prob="0.939">
            <gDNA_intron_boundary i_start="55271" i_stop="55201" i_length="71"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="55200" e_stop="55144" e_length="57"/>
          </exon>
          <intron i_serial="3" don_prob="0.998" acc_prob="0.120">
            <gDNA_intron_boundary i_start="55143" i_stop="54428" i_length="716"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="54427" e_stop="54308" e_length="120"/>
          </exon>
          <intron i_serial="4" don_prob="0.969" acc_prob="0.963">
            <gDNA_intron_boundary i_start="54307" i_stop="54215" i_length="93"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="54214" e_stop="54110" e_length="105"/>
          </exon>
          <intron i_serial="5" don_prob="0.999" acc_prob="0.918">
            <gDNA_intron_boundary i_start="54109" i_stop="53970" i_length="140"/>
          </intron>
          <exon e_serial="6" e_score="0.996">
            <gDNA_exon_boundary e_start="53969" e_stop="53746" e_length="224"/>
          </exon>
          <intron i_serial="6" don_prob="0.804" acc_prob="0.994">
            <gDNA_intron_boundary i_start="53745" i_stop="53658" i_length="88"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="53657" e_stop="53591" e_length="67"/>
          </exon>
          <intron i_serial="7" don_prob="0.997" acc_prob="0.137">
            <gDNA_intron_boundary i_start="53590" i_stop="53506" i_length="85"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="53505" e_stop="53351" e_length="155"/>
          </exon>
          <intron i_serial="8" don_prob="0.983" acc_prob="0.991">
            <gDNA_intron_boundary i_start="53350" i_stop="53169" i_length="182"/>
          </intron>
          <exon e_serial="9" e_score="0.996">
            <gDNA_exon_boundary e_start="53168" e_stop="52904" e_length="265"/>
          </exon>
          <intron i_serial="9" don_prob="0.952" acc_prob="0.974">
            <gDNA_intron_boundary i_start="52903" i_stop="52743" i_length="161"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="52742" e_stop="52548" e_length="195"/>
          </exon>
          <intron i_serial="10" don_prob="0.999" acc_prob="0.996">
            <gDNA_intron_boundary i_start="52547" i_stop="52399" i_length="149"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="52398" e_stop="52319" e_length="80"/>
          </exon>
          <intron i_serial="11" don_prob="0.978" acc_prob="0.997">
            <gDNA_intron_boundary i_start="52318" i_stop="51594" i_length="725"/>
          </intron>
          <exon e_serial="12" e_score="1.000">
            <gDNA_exon_boundary e_start="51593" e_stop="51531" e_length="63"/>
          </exon>
          <intron i_serial="12" don_prob="0.942" acc_prob="0.999">
            <gDNA_intron_boundary i_start="51530" i_stop="51400" i_length="131"/>
          </intron>
          <exon e_serial="13" e_score="0.955">
            <gDNA_exon_boundary e_start="51399" e_stop="51333" e_length="67"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61761" stop="61337"/>
              <exon start="55416" stop="55272"/>
              <exon start="55200" stop="55144"/>
              <exon start="54427" stop="54308"/>
              <exon start="54214" stop="54180"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E737091" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61635" stop="61337"/>
              <exon start="55416" stop="55272"/>
              <exon start="55200" stop="55171"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E438713" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54315" stop="54308"/>
              <exon start="54214" stop="54110"/>
              <exon start="53969" stop="53746"/>
              <exon start="53657" stop="53591"/>
              <exon start="53505" stop="53351"/>
              <exon start="53168" stop="52904"/>
              <exon start="52742" stop="52713"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E736405" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53040" stop="52904"/>
              <exon start="52742" stop="52548"/>
              <exon start="52398" stop="52319"/>
              <exon start="51593" stop="51531"/>
              <exon start="51399" stop="51333"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E340808" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CAAACCACTGCAACTTCTTCACTCCCCTTCTCCCCCATAGCAATGCCCATCCAACTCCATACTTCTACGCGCCTTCATCACTTGCCTTCTCATCTCCTTCCTCGTCCTCCTCTCCTCCGCTCTGCGCTTTTACTCCCTGCCTGTCGCCGTCCTTTACTGCGCCGTGAATTTTGTAACCATGAACGCTTCGGAGTCTCCAATTGTACAAAAAGTTCTAGCAAAAATACCGTGACTGTGCTAGTAAATGCAATTGATGGGCAAAAGATAAATGAGAAACACGAGAAGGTCAAAAGGGCTTACCCGTTTCACGAAATTGAACCAAAATGGCAACATTATTGGGAAGAGAATAAGACATTTCGAACCCCTGATGAGATTGATACTTCCAAGCCCAAATTCTATGTTCTTGATATGTTCCCATATCCAAG : TGGAGCTGGTTTGCATGTTGGACATCCACTGGGATATACTGCGACAGATATCCTTGCTAGATTTAAACGCATGCAAGGTTTCAACGTATTGCATCCAATGGGATGGGATGCATTTGGTTTACCTGCTGAGCAGTACGCTATTGAC : ACAGGCACACATCCAAAAATCACAACTTTGAGGAATATTAGTCGTTTTCGCTCGCAG : CTTAAATCATTAGGCTTCTCTTATGATTGGGATCGTGAGATTTCTACGACAGAACCTGATTACTACAAATGGACTCAGTGGATATTTCTTCAACTTCTGAAGAGAGGACTAGCTTATCAG : GCTGAAGTGCCTGTCAATTGGTGTCCAGCACTTGGTACTGTCTTGGCAAATGAAGAAGTAATTGATGGTGTAAGTGAAAGAGGGGGGCATCCAGTCATCAGAAAG : CCTATGCGGCAGTGGATGTTGAGGATAACTGCTTATGCTGACCGTCTTCTTGAGGATTTAGATGACCTAGACTGGCCTGAAAGTATAAAGGAAATGCAGAGGAATTGGATTGGTAGGTCAGAAGGAGCAGAATTGGATTTTGTTGTCATAAATGGTAACAGTCAGGAAGAAGAGAAAAGAATAACAGTTTATACAACAAGACCAGACACTATTTTTGGTGCAAC : ATACTTAGTCCTTGCACCTGAGCATCCCTTTCTGTCATCACTTGTATCAGAAGCACAAAGTAAACAT : GTAGAGGAGTACAGGGAACATGCTTTTAGAAAGAGTGACCTTGAGAGGACTGAGCTTCAAAAGGAAAAAACAGGCGTCTTTACTGGTTGTTATGCAAAAAATCCAGCCAATGGCCAAGCTGTTCCTATTTGGGTTGCTGATTATGTCTTGGGAAG : CTACGGGACAGGAGCAATAATGGCTGTGCCTGCCCATGACACACGCGACTTTGAATTTGCTATGAAGTACACTATCCCAATTTCTTGGGTTGTAAGACCAGATGATAGCAATTGTGGCAATTTTGAGAAACCATATTCAGGTGAAGGATCAATGATAAATTCATCATATTCAGAGTCAGGGCTTGACATTAATGGTTTGCCTAGCAAAGAAGCTGCTTCAAGAGTCGTCCAATGGCTTGAGAAAAGTGGAAACGGGAAGAAAAAG : GTAAATTACAAGTTAAGGGACTGGCTTTTTGCCCGGCAACGCTATTGGGGGGAGCCTATTCCAGTTATCTTTTTGGATGACACAGGAGAAGGTATTCCAGTTCCAGAAACCGAGCTTCCTCTTACCCTTCCTGAGTTGGATGATTTCACTCCCACTGGGACTGGGGAGCCACCTCTTGCCAAAGCAGATTCTTGG : GTTATAACCAAAGATCCTTTATCTGAAAAACCTGCTAGGCGAGAAACAAACACCATGCCCCAGTGGGCTGGTTCTTGCTG : GTACTATCTAAGATTTATGGACCCAAAAAACTCCAGCGCATTGGTTGACAAGGCACAAGAACA : GTACTGGGGCCCTGTTGACGTGTATGTTGGTGGTGCTGAGCATGCTGTTCTTCATTTACTTTATGCC</gDNA_template>
            <first_frame> Q  T  T  A  T  S  S  L  P  F  S  P  I  A  M  P  I  Q  L  H  T  S  T  R  L  H  H  L  P  S  H  L  L  P  R  P  P  L  L  R  S  A  L  L  L  P  A  C  R  R  P  L  L  R  R  E  F  C  N  H  E  R  F  G  V  S  N  C  T  K  S  S  S  K  N  T  V  T  V  L  V  N  A  I  D  G  Q  K  I  N  E  K  H  E  K  V  K  R  A  Y  P  F  H  E  I  E  P  K  W  Q  H  Y  W  E  E  N  K  T  F  R  T  P  D  E  I  D  T  S  K  P  K  F  Y  V  L  D  M  F  P  Y  P  S :   G  A  G  L  H  V  G  H  P  L  G  Y  T  A  T  D  I  L  A  R  F  K  R  M  Q  G  F  N  V  L  H  P  M  G  W  D  A  F  G  L  P  A  E  Q  Y  A  I  D  :  T  G  T  H  P  K  I  T  T  L  R  N  I  S  R  F  R  S  Q  :  L  K  S  L  G  F  S  Y  D  W  D  R  E  I  S  T  T  E  P  D  Y  Y  K  W  T  Q  W  I  F  L  Q  L  L  K  R  G  L  A  Y  Q  :  A  E  V  P  V  N  W  C  P  A  L  G  T  V  L  A  N  E  E  V  I  D  G  V  S  E  R  G  G  H  P  V  I  R  K  :  P  M  R  Q  W  M  L  R  I  T  A  Y  A  D  R  L  L  E  D  L  D  D  L  D  W  P  E  S  I  K  E  M  Q  R  N  W  I  G  R  S  E  G  A  E  L  D  F  V  V  I  N  G  N  S  Q  E  E  E  K  R  I  T  V  Y  T  T  R  P  D  T  I  F  G  A  T :   Y  L  V  L  A  P  E  H  P  F  L  S  S  L  V  S  E  A  Q  S  K  H  :  V  E  E  Y  R  E  H  A  F  R  K  S  D  L  E  R  T  E  L  Q  K  E  K  T  G  V  F  T  G  C  Y  A  K  N  P  A  N  G  Q  A  V  P  I  W  V  A  D  Y  V  L  G  S :   Y  G  T  G  A  I  M  A  V  P  A  H  D  T  R  D  F  E  F  A  M  K  Y  T  I  P  I  S  W  V  V  R  P  D  D  S  N  C  G  N  F  E  K  P  Y  S  G  E  G  S  M  I  N  S  S  Y  S  E  S  G  L  D  I  N  G  L  P  S  K  E  A  A  S  R  V  V  Q  W  L  E  K  S  G  N  G  K  K  K  :  V  N  Y  K  L  R  D  W  L  F  A  R  Q  R  Y  W  G  E  P  I  P  V  I  F  L  D  D  T  G  E  G  I  P  V  P  E  T  E  L  P  L  T  L  P  E  L  D  D  F  T  P  T  G  T  G  E  P  P  L  A  K  A  D  S  W  :  V  I  T  K  D  P  L  S  E  K  P  A  R  R  E  T  N  T  M  P  Q  W  A  G  S  C  W :   Y  Y  L  R  F  M  D  P  K  N  S  S  A  L  V  D  K  A  Q  E  Q :   Y  W  G  P  V  D  V  Y  V  G  G  A  E  H  A  V  L  H  L  L  Y  A </first_frame>
            <second_frame>  K  P  L  Q  L  L  H  S  P  S  P  P  *  Q  C  P  S  N  S  I  L  L  R  A  F  I  T  C  L  L  I  S  F  L  V  L  L  S  S  A  L  R  F  Y  S  L  P  V  A  V  L  Y  C  A  V  N  F  V  T  M  N  A  S  E  S  P  I  V  Q  K  V  L  A  K  I  P  *  L  C  *  *  M  Q  L  M  G  K  R  *  M  R  N  T  R  R  S  K  G  L  T  R  F  T  K  L  N  Q  N  G  N  I  I  G  K  R  I  R  H  F  E  P  L  M  R  L  I  L  P  S  P  N  S  M  F  L  I  C  S  H  I  Q   : V  E  L  V  C  M  L  D  I  H  W  D  I  L  R  Q  I  S  L  L  D  L  N  A  C  K  V  S  T  Y  C  I  Q  W  D  G  M  H  L  V  Y  L  L  S  S  T  L  L  T :   Q  A  H  I  Q  K  S  Q  L  *  G  I  L  V  V  F  A  R  S :   L  N  H  *  A  S  L  M  I  G  I  V  R  F  L  R  Q  N  L  I  T  T  N  G  L  S  G  Y  F  F  N  F  *  R  E  D  *  L  I  R :   L  K  C  L  S  I  G  V  Q  H  L  V  L  S  W  Q  M  K  K  *  L  M  V  *  V  K  E  G  G  I  Q  S  S  E  S :   L  C  G  S  G  C  *  G  *  L  L  M  L  T  V  F  L  R  I  *  M  T  *  T  G  L  K  V  *  R  K  C  R  G  I  G  L  V  G  Q  K  E  Q  N  W  I  L  L  S  *  M  V  T  V  R  K  K  R  K  E  *  Q  F  I  Q  Q  D  Q  T  L  F  L  V  Q   : H  T  *  S  L  H  L  S  I  P  F  C  H  H  L  Y  Q  K  H  K  V  N  M :   *  R  S  T  G  N  M  L  L  E  R  V  T  L  R  G  L  S  F  K  R  K  K  Q  A  S  L  L  V  V  M  Q  K  I  Q  P  M  A  K  L  F  L  F  G  L  L  I  M  S  W  E   : A  T  G  Q  E  Q  *  W  L  C  L  P  M  T  H  A  T  L  N  L  L  *  S  T  L  S  Q  F  L  G  L  *  D  Q  M  I  A  I  V  A  I  L  R  N  H  I  Q  V  K  D  Q  *  *  I  H  H  I  Q  S  Q  G  L  T  L  M  V  C  L  A  K  K  L  L  Q  E  S  S  N  G  L  R  K  V  E  T  G  R  K  R :   *  I  T  S  *  G  T  G  F  L  P  G  N  A  I  G  G  S  L  F  Q  L  S  F  W  M  T  Q  E  K  V  F  Q  F  Q  K  P  S  F  L  L  P  F  L  S  W  M  I  S  L  P  L  G  L  G  S  H  L  L  P  K  Q  I  L  G :   L  *  P  K  I  L  Y  L  K  N  L  L  G  E  K  Q  T  P  C  P  S  G  L  V  L  A   : G  T  I  *  D  L  W  T  Q  K  T  P  A  H  W  L  T  R  H  K  N   : S  T  G  A  L  L  T  C  M  L  V  V  L  S  M  L  F  F  I  Y  F  M   </second_frame>
            <third_frame>   N  H  C  N  F  F  T  P  L  L  P  H  S  N  A  H  P  T  P  Y  F  Y  A  P  S  S  L  A  F  S  S  P  S  S  S  S  S  P  P  L  C  A  F  T  P  C  L  S  P  S  F  T  A  P  *  I  L  *  P  *  T  L  R  S  L  Q  L  Y  K  K  F  *  Q  K  Y  R  D  C  A  S  K  C  N  *  W  A  K  D  K  *  E  T  R  E  G  Q  K  G  L  P  V  S  R  N  *  T  K  M  A  T  L  L  G  R  E  *  D  I  S  N  P  *  *  D  *  Y  F  Q  A  Q  I  L  C  S  *  Y  V  P  I  S  K  :  W  S  W  F  A  C  W  T  S  T  G  I  Y  C  D  R  Y  P  C  *  I  *  T  H  A  R  F  Q  R  I  A  S  N  G  M  G  C  I  W  F  T  C  *  A  V  R  Y  *   : H  R  H  T  S  K  N  H  N  F  E  E  Y  *  S  F  S  L  A   : A  *  I  I  R  L  L  L  *  L  G  S  *  D  F  Y  D  R  T  *  L  L  Q  M  D  S  V  D  I  S  S  T  S  E  E  R  T  S  L  S   : G  *  S  A  C  Q  L  V  S  S  T  W  Y  C  L  G  K  *  R  S  N  *  W  C  K  *  K  R  G  A  S  S  H  Q  K   : A  Y  A  A  V  D  V  E  D  N  C  L  C  *  P  S  S  *  G  F  R  *  P  R  L  A  *  K  Y  K  G  N  A  E  E  L  D  W  *  V  R  R  S  R  I  G  F  C  C  H  K  W  *  Q  S  G  R  R  E  K  N  N  S  L  Y  N  K  T  R  H  Y  F  W  C  N  :  I  L  S  P  C  T  *  A  S  L  S  V  I  T  C  I  R  S  T  K  *  T   : C  R  G  V  Q  G  T  C  F  *  K  E  *  P  *  E  D  *  A  S  K  G  K  N  R  R  L  Y  W  L  L  C  K  K  S  S  Q  W  P  S  C  S  Y  L  G  C  *  L  C  L  G  K  :  L  R  D  R  S  N  N  G  C  A  C  P  *  H  T  R  L  *  I  C  Y  E  V  H  Y  P  N  F  L  G  C  K  T  R  *  *  Q  L  W  Q  F  *  E  T  I  F  R  *  R  I  N  D  K  F  I  I  F  R  V  R  A  *  H  *  W  F  A  *  Q  R  S  C  F  K  S  R  P  M  A  *  E  K  W  K  R  E  E  K   : G  K  L  Q  V  K  G  L  A  F  C  P  A  T  L  L  G  G  A  Y  S  S  Y  L  F  G  *  H  R  R  R  Y  S  S  S  R  N  R  A  S  S  Y  P  S  *  V  G  *  F  H  S  H  W  D  W  G  A  T  S  C  Q  S  R  F  L   : G  Y  N  Q  R  S  F  I  *  K  T  C  *  A  R  N  K  H  H  A  P  V  G  W  F  L  L  :  V  L  S  K  I  Y  G  P  K  K  L  Q  R  I  G  *  Q  G  T  R  T  :  V  L  G  P  C  *  R  V  C  W  W  C  *  A  C  C  S  S  F  T  L  C  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0320D04.2" strand="-"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="61761" stop="61337"/>
                    <exon start="55416" stop="55272"/>
                    <exon start="55200" stop="55144"/>
                    <exon start="54427" stop="54308"/>
                    <exon start="54214" stop="54110"/>
                    <exon start="53969" stop="53746"/>
                    <exon start="53657" stop="53591"/>
                    <exon start="53505" stop="53351"/>
                    <exon start="53168" stop="52904"/>
                    <exon start="52742" stop="52548"/>
                    <exon start="52398" stop="52319"/>
                    <exon start="51593" stop="51531"/>
                    <exon start="51399" stop="51333"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1968</number_coding_nucleotides>
                  <number_encoded_amino_acids>656</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QTTATSSLPFSPIAMPIQLHTSTRLHHLPSHLLPRPPLLRSALLLPACRRPLLRREFCNHERFGVSNCTKSSSKNTVTVLVNAIDGQKINEKHEKVKRAYPFHEIEPKWQHYWEENKTFRTPDEIDTSKPKFYVLDMFPYPSGAGLHVGHPLGYTATDILARFKRMQGFNVLHPMGWDAFGLPAEQYAIDTGTHPKITTLRNISRFRSQLKSLGFSYDWDREISTTEPDYYKWTQWIFLQLLKRGLAYQAEVPVNWCPALGTVLANEEVIDGVSERGGHPVIRKPMRQWMLRITAYADRLLEDLDDLDWPESIKEMQRNWIGRSEGAELDFVVINGNSQEEEKRITVYTTRPDTIFGATYLVLAPEHPFLSSLVSEAQSKHVEEYREHAFRKSDLERTELQKEKTGVFTGCYAKNPANGQAVPIWVADYVLGSYGTGAIMAVPAHDTRDFEFAMKYTIPISWVVRPDDSNCGNFEKPYSGEGSMINSSYSESGLDINGLPSKEAASRVVQWLEKSGNGKKKVNYKLRDWLFARQRYWGEPIPVIFLDDTGEGIPVPETELPLTLPELDDFTPTGTGEPPLAKADSWVITKDPLSEKPARRETNTMPQWAGSCWYYLRFMDPKNSSALVDKAQEQYWGPVDVYVGGAEHAVLHLLYA</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="61761" e_stop="61337"/>
            <exon e_start="55416" e_stop="55272"/>
            <exon e_start="55200" e_stop="55144"/>
            <exon e_start="54427" e_stop="54308"/>
            <exon e_start="54214" e_stop="54110"/>
            <exon e_start="53969" e_stop="53746"/>
            <exon e_start="53657" e_stop="53591"/>
            <exon e_start="53505" e_stop="53351"/>
            <exon e_start="53168" e_stop="52904"/>
            <exon e_start="52742" e_stop="52488"/>
            <exon e_start="52398" e_stop="52336"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.939" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.120" e_score="1.000"/>
          <exon-intron don_prob="0.969" acc_prob="0.963" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.918" e_score="1.000"/>
          <exon-intron don_prob="0.804" acc_prob="0.994" e_score="0.996"/>
          <exon-intron don_prob="0.997" acc_prob="0.137" e_score="1.000"/>
          <exon-intron don_prob="0.983" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.952" acc_prob="0.974" e_score="0.996"/>
          <exon-intron don_prob="0.830" acc_prob="0.996" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="61761" e_stop="61337" e_length="425"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.994">
            <gDNA_intron_boundary i_start="61336" i_stop="55417" i_length="5920"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="55416" e_stop="55272" e_length="145"/>
          </exon>
          <intron i_serial="2" don_prob="0.998" acc_prob="0.939">
            <gDNA_intron_boundary i_start="55271" i_stop="55201" i_length="71"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="55200" e_stop="55144" e_length="57"/>
          </exon>
          <intron i_serial="3" don_prob="0.998" acc_prob="0.120">
            <gDNA_intron_boundary i_start="55143" i_stop="54428" i_length="716"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="54427" e_stop="54308" e_length="120"/>
          </exon>
          <intron i_serial="4" don_prob="0.969" acc_prob="0.963">
            <gDNA_intron_boundary i_start="54307" i_stop="54215" i_length="93"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="54214" e_stop="54110" e_length="105"/>
          </exon>
          <intron i_serial="5" don_prob="0.999" acc_prob="0.918">
            <gDNA_intron_boundary i_start="54109" i_stop="53970" i_length="140"/>
          </intron>
          <exon e_serial="6" e_score="0.996">
            <gDNA_exon_boundary e_start="53969" e_stop="53746" e_length="224"/>
          </exon>
          <intron i_serial="6" don_prob="0.804" acc_prob="0.994">
            <gDNA_intron_boundary i_start="53745" i_stop="53658" i_length="88"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="53657" e_stop="53591" e_length="67"/>
          </exon>
          <intron i_serial="7" don_prob="0.997" acc_prob="0.137">
            <gDNA_intron_boundary i_start="53590" i_stop="53506" i_length="85"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="53505" e_stop="53351" e_length="155"/>
          </exon>
          <intron i_serial="8" don_prob="0.983" acc_prob="0.991">
            <gDNA_intron_boundary i_start="53350" i_stop="53169" i_length="182"/>
          </intron>
          <exon e_serial="9" e_score="0.996">
            <gDNA_exon_boundary e_start="53168" e_stop="52904" e_length="265"/>
          </exon>
          <intron i_serial="9" don_prob="0.952" acc_prob="0.974">
            <gDNA_intron_boundary i_start="52903" i_stop="52743" i_length="161"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="52742" e_stop="52488" e_length="255"/>
          </exon>
          <intron i_serial="10" don_prob="0.830" acc_prob="0.996">
            <gDNA_intron_boundary i_start="52487" i_stop="52399" i_length="89"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="52398" e_stop="52336" e_length="63"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61761" stop="61337"/>
              <exon start="55416" stop="55272"/>
              <exon start="55200" stop="55144"/>
              <exon start="54427" stop="54308"/>
              <exon start="54214" stop="54180"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E737091" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61635" stop="61337"/>
              <exon start="55416" stop="55272"/>
              <exon start="55200" stop="55171"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E438713" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54315" stop="54308"/>
              <exon start="54214" stop="54110"/>
              <exon start="53969" stop="53746"/>
              <exon start="53657" stop="53591"/>
              <exon start="53505" stop="53351"/>
              <exon start="53168" stop="52904"/>
              <exon start="52742" stop="52713"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E736405" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53032" stop="52904"/>
              <exon start="52742" stop="52488"/>
              <exon start="52398" stop="52336"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E277392" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CAAACCACTGCAACTTCTTCACTCCCCTTCTCCCCCATAGCAATGCCCATCCAACTCCATACTTCTACGCGCCTTCATCACTTGCCTTCTCATCTCCTTCCTCGTCCTCCTCTCCTCCGCTCTGCGCTTTTACTCCCTGCCTGTCGCCGTCCTTTACTGCGCCGTGAATTTTGTAACCATGAACGCTTCGGAGTCTCCAATTGTACAAAAAGTTCTAGCAAAAATACCGTGACTGTGCTAGTAAATGCAATTGATGGGCAAAAGATAAATGAGAAACACGAGAAGGTCAAAAGGGCTTACCCGTTTCACGAAATTGAACCAAAATGGCAACATTATTGGGAAGAGAATAAGACATTTCGAACCCCTGATGAGATTGATACTTCCAAGCCCAAATTCTATGTTCTTGATATGTTCCCATATCCAAG : TGGAGCTGGTTTGCATGTTGGACATCCACTGGGATATACTGCGACAGATATCCTTGCTAGATTTAAACGCATGCAAGGTTTCAACGTATTGCATCCAATGGGATGGGATGCATTTGGTTTACCTGCTGAGCAGTACGCTATTGAC : ACAGGCACACATCCAAAAATCACAACTTTGAGGAATATTAGTCGTTTTCGCTCGCAG : CTTAAATCATTAGGCTTCTCTTATGATTGGGATCGTGAGATTTCTACGACAGAACCTGATTACTACAAATGGACTCAGTGGATATTTCTTCAACTTCTGAAGAGAGGACTAGCTTATCAG : GCTGAAGTGCCTGTCAATTGGTGTCCAGCACTTGGTACTGTCTTGGCAAATGAAGAAGTAATTGATGGTGTAAGTGAAAGAGGGGGGCATCCAGTCATCAGAAAG : CCTATGCGGCAGTGGATGTTGAGGATAACTGCTTATGCTGACCGTCTTCTTGAGGATTTAGATGACCTAGACTGGCCTGAAAGTATAAAGGAAATGCAGAGGAATTGGATTGGTAGGTCAGAAGGAGCAGAATTGGATTTTGTTGTCATAAATGGTAACAGTCAGGAAGAAGAGAAAAGAATAACAGTTTATACAACAAGACCAGACACTATTTTTGGTGCAAC : ATACTTAGTCCTTGCACCTGAGCATCCCTTTCTGTCATCACTTGTATCAGAAGCACAAAGTAAACAT : GTAGAGGAGTACAGGGAACATGCTTTTAGAAAGAGTGACCTTGAGAGGACTGAGCTTCAAAAGGAAAAAACAGGCGTCTTTACTGGTTGTTATGCAAAAAATCCAGCCAATGGCCAAGCTGTTCCTATTTGGGTTGCTGATTATGTCTTGGGAAG : CTACGGGACAGGAGCAATAATGGCTGTGCCTGCCCATGACACACGCGACTTTGAATTTGCTATGAAGTACACTATCCCAATTTCTTGGGTTGTAAGACCAGATGATAGCAATTGTGGCAATTTTGAGAAACCATATTCAGGTGAAGGATCAATGATAAATTCATCATATTCAGAGTCAGGGCTTGACATTAATGGTTTGCCTAGCAAAGAAGCTGCTTCAAGAGTCGTCCAATGGCTTGAGAAAAGTGGAAACGGGAAGAAAAAG : GTAAATTACAAGTTAAGGGACTGGCTTTTTGCCCGGCAACGCTATTGGGGGGAGCCTATTCCAGTTATCTTTTTGGATGACACAGGAGAAGGTATTCCAGTTCCAGAAACCGAGCTTCCTCTTACCCTTCCTGAGTTGGATGATTTCACTCCCACTGGGACTGGGGAGCCACCTCTTGCCAAAGCAGATTCTTGGGTAGGTTTTGCCTAATATGTGATGATTTCAACTTGACAAACATTGGTTCTTTGTCATTTG : GTTATAACCAAAGATCCTTTATCTGAAAAACCTGCTAGGCGAGAAACAAACACCATGCCCCAG</gDNA_template>
            <first_frame> Q  T  T  A  T  S  S  L  P  F  S  P  I  A  M  P  I  Q  L  H  T  S  T  R  L  H  H  L  P  S  H  L  L  P  R  P  P  L  L  R  S  A  L  L  L  P  A  C  R  R  P  L  L  R  R  E  F  C  N  H  E  R  F  G  V  S  N  C  T  K  S  S  S  K  N  T  V  T  V  L  V  N  A  I  D  G  Q  K  I  N  E  K  H  E  K  V  K  R  A  Y  P  F  H  E  I  E  P  K  W  Q  H  Y  W  E  E  N  K  T  F  R  T  P  D  E  I  D  T  S  K  P  K  F  Y  V  L  D  M  F  P  Y  P  S :   G  A  G  L  H  V  G  H  P  L  G  Y  T  A  T  D  I  L  A  R  F  K  R  M  Q  G  F  N  V  L  H  P  M  G  W  D  A  F  G  L  P  A  E  Q  Y  A  I  D  :  T  G  T  H  P  K  I  T  T  L  R  N  I  S  R  F  R  S  Q  :  L  K  S  L  G  F  S  Y  D  W  D  R  E  I  S  T  T  E  P  D  Y  Y  K  W  T  Q  W  I  F  L  Q  L  L  K  R  G  L  A  Y  Q  :  A  E  V  P  V  N  W  C  P  A  L  G  T  V  L  A  N  E  E  V  I  D  G  V  S  E  R  G  G  H  P  V  I  R  K  :  P  M  R  Q  W  M  L  R  I  T  A  Y  A  D  R  L  L  E  D  L  D  D  L  D  W  P  E  S  I  K  E  M  Q  R  N  W  I  G  R  S  E  G  A  E  L  D  F  V  V  I  N  G  N  S  Q  E  E  E  K  R  I  T  V  Y  T  T  R  P  D  T  I  F  G  A  T :   Y  L  V  L  A  P  E  H  P  F  L  S  S  L  V  S  E  A  Q  S  K  H  :  V  E  E  Y  R  E  H  A  F  R  K  S  D  L  E  R  T  E  L  Q  K  E  K  T  G  V  F  T  G  C  Y  A  K  N  P  A  N  G  Q  A  V  P  I  W  V  A  D  Y  V  L  G  S :   Y  G  T  G  A  I  M  A  V  P  A  H  D  T  R  D  F  E  F  A  M  K  Y  T  I  P  I  S  W  V  V  R  P  D  D  S  N  C  G  N  F  E  K  P  Y  S  G  E  G  S  M  I  N  S  S  Y  S  E  S  G  L  D  I  N  G  L  P  S  K  E  A  A  S  R  V  V  Q  W  L  E  K  S  G  N  G  K  K  K  :  V  N  Y  K  L  R  D  W  L  F  A  R  Q  R  Y  W  G  E  P  I  P  V  I  F  L  D  D  T  G  E  G  I  P  V  P  E  T  E  L  P  L  T  L  P  E  L  D  D  F  T  P  T  G  T  G  E  P  P  L  A  K  A  D  S  W  V  G  F  A  *  Y  V  M  I  S  T  *  Q  T  L  V  L  C  H  L  :  V  I  T  K  D  P  L  S  E  K  P  A  R  R  E  T  N  T  M  P  Q </first_frame>
            <second_frame>  K  P  L  Q  L  L  H  S  P  S  P  P  *  Q  C  P  S  N  S  I  L  L  R  A  F  I  T  C  L  L  I  S  F  L  V  L  L  S  S  A  L  R  F  Y  S  L  P  V  A  V  L  Y  C  A  V  N  F  V  T  M  N  A  S  E  S  P  I  V  Q  K  V  L  A  K  I  P  *  L  C  *  *  M  Q  L  M  G  K  R  *  M  R  N  T  R  R  S  K  G  L  T  R  F  T  K  L  N  Q  N  G  N  I  I  G  K  R  I  R  H  F  E  P  L  M  R  L  I  L  P  S  P  N  S  M  F  L  I  C  S  H  I  Q   : V  E  L  V  C  M  L  D  I  H  W  D  I  L  R  Q  I  S  L  L  D  L  N  A  C  K  V  S  T  Y  C  I  Q  W  D  G  M  H  L  V  Y  L  L  S  S  T  L  L  T :   Q  A  H  I  Q  K  S  Q  L  *  G  I  L  V  V  F  A  R  S :   L  N  H  *  A  S  L  M  I  G  I  V  R  F  L  R  Q  N  L  I  T  T  N  G  L  S  G  Y  F  F  N  F  *  R  E  D  *  L  I  R :   L  K  C  L  S  I  G  V  Q  H  L  V  L  S  W  Q  M  K  K  *  L  M  V  *  V  K  E  G  G  I  Q  S  S  E  S :   L  C  G  S  G  C  *  G  *  L  L  M  L  T  V  F  L  R  I  *  M  T  *  T  G  L  K  V  *  R  K  C  R  G  I  G  L  V  G  Q  K  E  Q  N  W  I  L  L  S  *  M  V  T  V  R  K  K  R  K  E  *  Q  F  I  Q  Q  D  Q  T  L  F  L  V  Q   : H  T  *  S  L  H  L  S  I  P  F  C  H  H  L  Y  Q  K  H  K  V  N  M :   *  R  S  T  G  N  M  L  L  E  R  V  T  L  R  G  L  S  F  K  R  K  K  Q  A  S  L  L  V  V  M  Q  K  I  Q  P  M  A  K  L  F  L  F  G  L  L  I  M  S  W  E   : A  T  G  Q  E  Q  *  W  L  C  L  P  M  T  H  A  T  L  N  L  L  *  S  T  L  S  Q  F  L  G  L  *  D  Q  M  I  A  I  V  A  I  L  R  N  H  I  Q  V  K  D  Q  *  *  I  H  H  I  Q  S  Q  G  L  T  L  M  V  C  L  A  K  K  L  L  Q  E  S  S  N  G  L  R  K  V  E  T  G  R  K  R :   *  I  T  S  *  G  T  G  F  L  P  G  N  A  I  G  G  S  L  F  Q  L  S  F  W  M  T  Q  E  K  V  F  Q  F  Q  K  P  S  F  L  L  P  F  L  S  W  M  I  S  L  P  L  G  L  G  S  H  L  L  P  K  Q  I  L  G  *  V  L  P  N  M  *  *  F  Q  L  D  K  H  W  F  F  V  I  W :   L  *  P  K  I  L  Y  L  K  N  L  L  G  E  K  Q  T  P  C  P   </second_frame>
            <third_frame>   N  H  C  N  F  F  T  P  L  L  P  H  S  N  A  H  P  T  P  Y  F  Y  A  P  S  S  L  A  F  S  S  P  S  S  S  S  S  P  P  L  C  A  F  T  P  C  L  S  P  S  F  T  A  P  *  I  L  *  P  *  T  L  R  S  L  Q  L  Y  K  K  F  *  Q  K  Y  R  D  C  A  S  K  C  N  *  W  A  K  D  K  *  E  T  R  E  G  Q  K  G  L  P  V  S  R  N  *  T  K  M  A  T  L  L  G  R  E  *  D  I  S  N  P  *  *  D  *  Y  F  Q  A  Q  I  L  C  S  *  Y  V  P  I  S  K  :  W  S  W  F  A  C  W  T  S  T  G  I  Y  C  D  R  Y  P  C  *  I  *  T  H  A  R  F  Q  R  I  A  S  N  G  M  G  C  I  W  F  T  C  *  A  V  R  Y  *   : H  R  H  T  S  K  N  H  N  F  E  E  Y  *  S  F  S  L  A   : A  *  I  I  R  L  L  L  *  L  G  S  *  D  F  Y  D  R  T  *  L  L  Q  M  D  S  V  D  I  S  S  T  S  E  E  R  T  S  L  S   : G  *  S  A  C  Q  L  V  S  S  T  W  Y  C  L  G  K  *  R  S  N  *  W  C  K  *  K  R  G  A  S  S  H  Q  K   : A  Y  A  A  V  D  V  E  D  N  C  L  C  *  P  S  S  *  G  F  R  *  P  R  L  A  *  K  Y  K  G  N  A  E  E  L  D  W  *  V  R  R  S  R  I  G  F  C  C  H  K  W  *  Q  S  G  R  R  E  K  N  N  S  L  Y  N  K  T  R  H  Y  F  W  C  N  :  I  L  S  P  C  T  *  A  S  L  S  V  I  T  C  I  R  S  T  K  *  T   : C  R  G  V  Q  G  T  C  F  *  K  E  *  P  *  E  D  *  A  S  K  G  K  N  R  R  L  Y  W  L  L  C  K  K  S  S  Q  W  P  S  C  S  Y  L  G  C  *  L  C  L  G  K  :  L  R  D  R  S  N  N  G  C  A  C  P  *  H  T  R  L  *  I  C  Y  E  V  H  Y  P  N  F  L  G  C  K  T  R  *  *  Q  L  W  Q  F  *  E  T  I  F  R  *  R  I  N  D  K  F  I  I  F  R  V  R  A  *  H  *  W  F  A  *  Q  R  S  C  F  K  S  R  P  M  A  *  E  K  W  K  R  E  E  K   : G  K  L  Q  V  K  G  L  A  F  C  P  A  T  L  L  G  G  A  Y  S  S  Y  L  F  G  *  H  R  R  R  Y  S  S  S  R  N  R  A  S  S  Y  P  S  *  V  G  *  F  H  S  H  W  D  W  G  A  T  S  C  Q  S  R  F  L  G  R  F  C  L  I  C  D  D  F  N  L  T  N  I  G  S  L  S  F   : G  Y  N  Q  R  S  F  I  *  K  T  C  *  A  R  N  K  H  H  A  P  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0320D04.2" strand="-"/>
                <serials PGL_serial="8" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="61761" stop="61337"/>
                    <exon start="55416" stop="55272"/>
                    <exon start="55200" stop="55144"/>
                    <exon start="54427" stop="54308"/>
                    <exon start="54214" stop="54110"/>
                    <exon start="53969" stop="53746"/>
                    <exon start="53657" stop="53591"/>
                    <exon start="53505" stop="53351"/>
                    <exon start="53168" stop="52904"/>
                    <exon start="52742" stop="52533"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1770</number_coding_nucleotides>
                  <number_encoded_amino_acids>590</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QTTATSSLPFSPIAMPIQLHTSTRLHHLPSHLLPRPPLLRSALLLPACRRPLLRREFCNHERFGVSNCTKSSSKNTVTVLVNAIDGQKINEKHEKVKRAYPFHEIEPKWQHYWEENKTFRTPDEIDTSKPKFYVLDMFPYPSGAGLHVGHPLGYTATDILARFKRMQGFNVLHPMGWDAFGLPAEQYAIDTGTHPKITTLRNISRFRSQLKSLGFSYDWDREISTTEPDYYKWTQWIFLQLLKRGLAYQAEVPVNWCPALGTVLANEEVIDGVSERGGHPVIRKPMRQWMLRITAYADRLLEDLDDLDWPESIKEMQRNWIGRSEGAELDFVVINGNSQEEEKRITVYTTRPDTIFGATYLVLAPEHPFLSSLVSEAQSKHVEEYREHAFRKSDLERTELQKEKTGVFTGCYAKNPANGQAVPIWVADYVLGSYGTGAIMAVPAHDTRDFEFAMKYTIPISWVVRPDDSNCGNFEKPYSGEGSMINSSYSESGLDINGLPSKEAASRVVQWLEKSGNGKKKVNYKLRDWLFARQRYWGEPIPVIFLDDTGEGIPVPETELPLTLPELDDFTPTGTGEPPLAKADSWVGFA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="+" PGL_start="63388" PGL_stop="68575"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="63388" e_stop="63610"/>
            <exon e_start="67222" e_stop="68575"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.993" acc_prob="0.995" e_score="1.000"/>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="63388" e_stop="63610" e_length="223"/>
          </exon>
          <intron i_serial="1" don_prob="0.993" acc_prob="0.995">
            <gDNA_intron_boundary i_start="63611" i_stop="67221" i_length="3611"/>
          </intron>
          <exon e_serial="2" e_score="0.996">
            <gDNA_exon_boundary e_start="67222" e_stop="68575" e_length="1354"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63388" stop="63610"/>
              <exon start="67222" stop="67542"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E312193" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63401" stop="63610"/>
              <exon start="67222" stop="67756"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E340682" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="67222" stop="67713"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E321149" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="67499" stop="68178"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E377500" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="67499" stop="68050"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E241814" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="67499" stop="68028"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E231879" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="67499" stop="67912"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E239678" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="67499" stop="67771"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E233811" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="67740" stop="68125"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E376723" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="67833" stop="68575"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E377499" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GGAAAAGGGGGTGGGGGGCTTAGAAGGAGGGTTTTGAAGCAACTTTTCCTTATCAAAAAATACTCAAAGATGGATCTAGAATTTGAAGTTAATTTGTAAAATTTTATTAGATTGGTGTGGATTTTTGGATGGATTGGGGGATTTGAATGAAGTTGAGAACAAAAAGGATGAAAGGATCAAAAAACATGGGTATGGAAGAATTGGAAGGGCTTATTCTTTCATG : GCAACAATGGTGAAGAGGGCCTAAGCTGCAAGAAATATGTATCAAAATTGTCCTTGGCCTAACACCTAAAAGAACACACAAGGACAATAGCAATAACCAAATACTAACTGCTACTGCTGCCAAAGAAAGTACTGCTATTTCTCTAAGCTATGTATGTGAGCTGCTCCAAATCTGTGACAACTTGGTTGATTGCATGAAGGACCATCTTCTTTATCTGTTACACCAGAGGATGAAACAAGTCAGTAAGAAATGGAGGCTTGTCTTAACATAGTCAGATTAAAATAAAGCATTTTTTATATGGCACCTCTAGTTTGTCTTCTCTGGCCTTGTGGCCTTTCGGCAATGTCCTGAACTCAGCTGTGAGGCGGAAACATTCTCGAATGTTTTCAGGAGAAACAAAATCAGCAGCAACTTTGGTACACGACTGGAAAGTTGAAAACAGATGGTTGGTTACTTGATGAACTTTATCATCTGGATTTTCATGGATTATTTAAGTATTGATTCTTACCTTGAGATTACGCACTTGGTGAGGGCATCCTGCAGGAATGAAAACTGACTCTCCAAGTCTTTGCTCAAATGTCCAAGGTTCAATCCCTAAAATAGTAAGCGTGCACATCTTGAGTTTATTAAATAAAATGTGATCCTTGTTATTGAGGAAAGATAACGAACAGGGTAAATTACTAACCGAATTCTTCCTTCAGTTTTCTCTTGTGCTCCAAAGTTAAGTAGAAGCTCTGGTCATGGATTGGATGAAAAACCTGATCAACCGGACAACAGAAAGTGTGCCTAAATTCCTTTGCATGCTTTAAAAGATACTCACTCAACTTGGGTACATCTTCCCTTCTGAAAATGTCCCACAATGCACCTCCAGTTGTCTCTGAATCATCAAAGGTTTTCTCCTCCCTGCTAATGTCACTAGACATCTTCATAGGATATTTATCAGCCTCGCATTCGATGCGCTCTCTTTCATCCTGAGCTCTATGCATCTGTTTCACTATTTCAATTGCCGACCGCTGCTCATCAGTTATAGCCATCTCTGCTGTGTGTGTCAAAATATTTATCTGAGCAATTCAAAATTTTAAAATATTAGCTTGTCATGAAATAAGCCTGAAAAAGTAATGGTTGCAGTCTTTGCAGGCTTCATCATGGACAGAATACAGAACTGGGAAAAGCAGTAAACTGCTACCAAGGTGAGAATAAACATTAAACTAGATTGTGGTATGTGGATTAATTTACCGGGAATGTGACAATTGTCGAACATATTGTATAGGACTGGCCATAAGGCAGAAGAGATTGGACGAATGTGGTTCTATATATTTGAAATAAAATTTTAGTTTTTTTTGCTCATTTTGGA</gDNA_template>
            <first_frame> G  K  G  G  G  G  L  R  R  R  V  L  K  Q  L  F  L  I  K  K  Y  S  K  M  D  L  E  F  E  V  N  L  *  N  F  I  R  L  V  W  I  F  G  W  I  G  G  F  E  *  S  *  E  Q  K  G  *  K  D  Q  K  T  W  V  W  K  N  W  K  G  L  F  F  H   : G  N  N  G  E  E  G  L  S  C  K  K  Y  V  S  K  L  S  L  A  *  H  L  K  E  H  T  R  T  I  A  I  T  K  Y  *  L  L  L  L  P  K  K  V  L  L  F  L  *  A  M  Y  V  S  C  S  K  S  V  T  T  W  L  I  A  *  R  T  I  F  F  I  C  Y  T  R  G  *  N  K  S  V  R  N  G  G  L  S  *  H  S  Q  I  K  I  K  H  F  L  Y  G  T  S  S  L  S  S  L  A  L  W  P  F  G  N  V  L  N  S  A  V  R  R  K  H  S  R  M  F  S  G  E  T  K  S  A  A  T  L  V  H  D  W  K  V  E  N  R  W  L  V  T  *  *  T  L  S  S  G  F  S  W  I  I  *  V  L  I  L  T  L  R  L  R  T  W  *  G  H  P  A  G  M  K  T  D  S  P  S  L  C  S  N  V  Q  G  S  I  P  K  I  V  S  V  H  I  L  S  L  L  N  K  M  *  S  L  L  L  R  K  D  N  E  Q  G  K  L  L  T  E  F  F  L  Q  F  S  L  V  L  Q  S  *  V  E  A  L  V  M  D  W  M  K  N  L  I  N  R  T  T  E  S  V  P  K  F  L  C  M  L  *  K  I  L  T  Q  L  G  Y  I  F  P  S  E  N  V  P  Q  C  T  S  S  C  L  *  I  I  K  G  F  L  L  P  A  N  V  T  R  H  L  H  R  I  F  I  S  L  A  F  D  A  L  S  F  I  L  S  S  M  H  L  F  H  Y  F  N  C  R  P  L  L  I  S  Y  S  H  L  C  C  V  C  Q  N  I  Y  L  S  N  S  K  F  *  N  I  S  L  S  *  N  K  P  E  K  V  M  V  A  V  F  A  G  F  I  M  D  R  I  Q  N  W  E  K  Q  *  T  A  T  K  V  R  I  N  I  K  L  D  C  G  M  W  I  N  L  P  G  M  *  Q  L  S  N  I  L  Y  R  T  G  H  K  A  E  E  I  G  R  M  W  F  Y  I  F  E  I  K  F  *  F  F  L  L  I  L   </first_frame>
            <second_frame>  E  K  G  V  G  G  L  E  G  G  F  *  S  N  F  S  L  S  K  N  T  Q  R  W  I  *  N  L  K  L  I  C  K  I  L  L  D  W  C  G  F  L  D  G  L  G  D  L  N  E  V  E  N  K  K  D  E  R  I  K  K  H  G  Y  G  R  I  G  R  A  Y  S  F  M  :  A  T  M  V  K  R  A  *  A  A  R  N  M  Y  Q  N  C  P  W  P  N  T  *  K  N  T  Q  G  Q  *  Q  *  P  N  T  N  C  Y  C  C  Q  R  K  Y  C  Y  F  S  K  L  C  M  *  A  A  P  N  L  *  Q  L  G  *  L  H  E  G  P  S  S  L  S  V  T  P  E  D  E  T  S  Q  *  E  M  E  A  C  L  N  I  V  R  L  K  *  S  I  F  Y  M  A  P  L  V  C  L  L  W  P  C  G  L  S  A  M  S  *  T  Q  L  *  G  G  N  I  L  E  C  F  Q  E  K  Q  N  Q  Q  Q  L  W  Y  T  T  G  K  L  K  T  D  G  W  L  L  D  E  L  Y  H  L  D  F  H  G  L  F  K  Y  *  F  L  P  *  D  Y  A  L  G  E  G  I  L  Q  E  *  K  L  T  L  Q  V  F  A  Q  M  S  K  V  Q  S  L  K  *  *  A  C  T  S  *  V  Y  *  I  K  C  D  P  C  Y  *  G  K  I  T  N  R  V  N  Y  *  P  N  S  S  F  S  F  L  L  C  S  K  V  K  *  K  L  W  S  W  I  G  *  K  T  *  S  T  G  Q  Q  K  V  C  L  N  S  F  A  C  F  K  R  Y  S  L  N  L  G  T  S  S  L  L  K  M  S  H  N  A  P  P  V  V  S  E  S  S  K  V  F  S  S  L  L  M  S  L  D  I  F  I  G  Y  L  S  A  S  H  S  M  R  S  L  S  S  *  A  L  C  I  C  F  T  I  S  I  A  D  R  C  S  S  V  I  A  I  S  A  V  C  V  K  I  F  I  *  A  I  Q  N  F  K  I  L  A  C  H  E  I  S  L  K  K  *  W  L  Q  S  L  Q  A  S  S  W  T  E  Y  R  T  G  K  S  S  K  L  L  P  R  *  E  *  T  L  N  *  I  V  V  C  G  L  I  Y  R  E  C  D  N  C  R  T  Y  C  I  G  L  A  I  R  Q  K  R  L  D  E  C  G  S  I  Y  L  K  *  N  F  S  F  F  C  S  F  W  </second_frame>
            <third_frame>   K  R  G  W  G  A  *  K  E  G  F  E  A  T  F  P  Y  Q  K  I  L  K  D  G  S  R  I  *  S  *  F  V  K  F  Y  *  I  G  V  D  F  W  M  D  W  G  I  *  M  K  L  R  T  K  R  M  K  G  S  K  N  M  G  M  E  E  L  E  G  L  I  L  S  W :   Q  Q  W  *  R  G  P  K  L  Q  E  I  C  I  K  I  V  L  G  L  T  P  K  R  T  H  K  D  N  S  N  N  Q  I  L  T  A  T  A  A  K  E  S  T  A  I  S  L  S  Y  V  C  E  L  L  Q  I  C  D  N  L  V  D  C  M  K  D  H  L  L  Y  L  L  H  Q  R  M  K  Q  V  S  K  K  W  R  L  V  L  T  *  S  D  *  N  K  A  F  F  I  W  H  L  *  F  V  F  S  G  L  V  A  F  R  Q  C  P  E  L  S  C  E  A  E  T  F  S  N  V  F  R  R  N  K  I  S  S  N  F  G  T  R  L  E  S  *  K  Q  M  V  G  Y  L  M  N  F  I  I  W  I  F  M  D  Y  L  S  I  D  S  Y  L  E  I  T  H  L  V  R  A  S  C  R  N  E  N  *  L  S  K  S  L  L  K  C  P  R  F  N  P  *  N  S  K  R  A  H  L  E  F  I  K  *  N  V  I  L  V  I  E  E  R  *  R  T  G  *  I  T  N  R  I  L  P  S  V  F  S  C  A  P  K  L  S  R  S  S  G  H  G  L  D  E  K  P  D  Q  P  D  N  R  K  C  A  *  I  P  L  H  A  L  K  D  T  H  S  T  W  V  H  L  P  F  *  K  C  P  T  M  H  L  Q  L  S  L  N  H  Q  R  F  S  P  P  C  *  C  H  *  T  S  S  *  D  I  Y  Q  P  R  I  R  C  A  L  F  H  P  E  L  Y  A  S  V  S  L  F  Q  L  P  T  A  A  H  Q  L  *  P  S  L  L  C  V  S  K  Y  L  S  E  Q  F  K  I  L  K  Y  *  L  V  M  K  *  A  *  K  S  N  G  C  S  L  C  R  L  H  H  G  Q  N  T  E  L  G  K  A  V  N  C  Y  Q  G  E  N  K  H  *  T  R  L  W  Y  V  D  *  F  T  G  N  V  T  I  V  E  H  I  V  *  D  W  P  *  G  R  R  D  W  T  N  V  V  L  Y  I  *  N  K  I  L  V  F  F  A  H  F  G </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0320D04.2" strand="+"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="67235" stop="67492"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>255</number_coding_nucleotides>
                  <number_encoded_amino_acids>85</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RGPKLQEICIKIVLGLTPKRTHKDNSNNQILTATAAKESTAISLSYVCELLQICDNLVDCMKDHLLYLLHQRMKQVSKKWRLVLT*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0320D04.2" strand="+"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="67984" stop="68196"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>210</number_coding_nucleotides>
                  <number_encoded_amino_acids>70</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>STGQQKVCLNSFACFKRYSLNLGTSSLLKMSHNAPPVVSESSKVFSSLLMSLDIFIGYLSASHSMRSLSS*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0320D04.2" strand="+"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="68103" stop="68303"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>198</number_coding_nucleotides>
                  <number_encoded_amino_acids>66</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IIKGFLLPANVTRHLHRIFISLAFDALSFILSSMHLFHYFNCRPLLISYSHLCCVCQNIYLSNSKF*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="-" PGL_start="68890" PGL_stop="67071"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="68890" e_stop="68765"/>
            <exon e_start="68282" e_stop="67907"/>
            <exon e_start="67815" e_stop="67730"/>
            <exon e_start="67645" e_stop="67526"/>
            <exon e_start="67435" e_stop="67071"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.920" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.986" acc_prob="0.821" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.348" e_score="1.000"/>
          <exon-intron don_prob="0.977" acc_prob="0.926" e_score="1.000"/>
          <exon-only e_score="0.934"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="68890" e_stop="68765" e_length="126"/>
          </exon>
          <intron i_serial="1" don_prob="0.920" acc_prob="0.995">
            <gDNA_intron_boundary i_start="68764" i_stop="68283" i_length="482"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="68282" e_stop="67907" e_length="376"/>
          </exon>
          <intron i_serial="2" don_prob="0.986" acc_prob="0.821">
            <gDNA_intron_boundary i_start="67906" i_stop="67816" i_length="91"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="67815" e_stop="67730" e_length="86"/>
          </exon>
          <intron i_serial="3" don_prob="0.998" acc_prob="0.348">
            <gDNA_intron_boundary i_start="67729" i_stop="67646" i_length="84"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="67645" e_stop="67526" e_length="120"/>
          </exon>
          <intron i_serial="4" don_prob="0.977" acc_prob="0.926">
            <gDNA_intron_boundary i_start="67525" i_stop="67436" i_length="90"/>
          </intron>
          <exon e_serial="5" e_score="0.934">
            <gDNA_exon_boundary e_start="67435" e_stop="67071" e_length="365"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="68890" stop="68765"/>
              <exon start="68282" stop="67907"/>
              <exon start="67815" stop="67730"/>
              <exon start="67645" stop="67526"/>
              <exon start="67435" stop="67307"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E707013" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="67990" stop="67907"/>
              <exon start="67815" stop="67730"/>
              <exon start="67645" stop="67526"/>
              <exon start="67435" stop="67071"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E425123" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GTTAAATTACCGGCTGGAGTCATAAAACCAGATTTGGGTCCAAAGACATACATTGCTTATGGTCTCAGCGAGGAACTTGGGAGAGGGGATTCAGTGACAAAGCTTCACTGTGATATGTCAGATGCG : ATAAATATTTTGACACACACAGCAGAGATGGCTATAACTGATGAGCAGCGGTCGGCAATTGAAATAGTGAAACAGATGCATAGAGCTCAGGATGAAAGAGAGCGCATCGAATGCGAGGCTGATAAATATCCTATGAAGATGTCTAGTGACATTAGCAGGGAGGAGAAAACCTTTGATGATTCAGAGACAACTGGAGGTGCATTGTGGGACATTTTCAGAAGGGAAGATGTACCCAAGTTGAGTGAGTATCTTTTAAAGCATGCAAAGGAATTTAGGCACACTTTCTGTTGTCCGGTTGATCAGGTTTTTCATCCAATCCATGACCAGAGCTTCTACTTAACTTTGGAGCACAAGAGAAAACTGAAGGAAGAATTCG : GGATTGAACCTTGGACATTTGAGCAAAGACTTGGAGAGTCAGTTTTCATTCCTGCAGGATGCCCTCACCAAGTGCGTAATCTCAAG : TCGTGTACCAAAGTTGCTGCTGATTTTGTTTCTCCTGAAAACATTCGAGAATGTTTCCGCCTCACAGCTGAGTTCAGGACATTGCCGAAAGGCCACAAGGCCAGAGAAGACAAACTAGAG : ATAAAGAAGATGGTCCTTCATGCAATCAACCAAGTTGTCACAGATTTGGAGCAGCTCACATACATAGCTTAGAGAAATAGCAGTACTTTCTTTGGCAGCAGTAGCAGTTAGTATTTGGTTATTGCTATTGTCCTTGTGTGTTCTTTTAGGTGTTAGGCCAAGGACAATTTTGATACATATTTCTTGCAGCTTAGGCCCTCTTCACCATTGTTGCCTGTAGAAAAGTAAATGTTAAAGGAACATTCTTTTTTAGATCATACTTTTCCTGCAATAAAGGCAGCTTCTCCTATACAGAGACTCGTAACCTTTGCATTTGATTACATAATGGAATACAATGTGAAATTTCATGCAAATACTTTCTATAG</gDNA_template>
            <first_frame> V  K  L  P  A  G  V  I  K  P  D  L  G  P  K  T  Y  I  A  Y  G  L  S  E  E  L  G  R  G  D  S  V  T  K  L  H  C  D  M  S  D  A  :  I  N  I  L  T  H  T  A  E  M  A  I  T  D  E  Q  R  S  A  I  E  I  V  K  Q  M  H  R  A  Q  D  E  R  E  R  I  E  C  E  A  D  K  Y  P  M  K  M  S  S  D  I  S  R  E  E  K  T  F  D  D  S  E  T  T  G  G  A  L  W  D  I  F  R  R  E  D  V  P  K  L  S  E  Y  L  L  K  H  A  K  E  F  R  H  T  F  C  C  P  V  D  Q  V  F  H  P  I  H  D  Q  S  F  Y  L  T  L  E  H  K  R  K  L  K  E  E  F   : G  I  E  P  W  T  F  E  Q  R  L  G  E  S  V  F  I  P  A  G  C  P  H  Q  V  R  N  L  K  :  S  C  T  K  V  A  A  D  F  V  S  P  E  N  I  R  E  C  F  R  L  T  A  E  F  R  T  L  P  K  G  H  K  A  R  E  D  K  L  E  :  I  K  K  M  V  L  H  A  I  N  Q  V  V  T  D  L  E  Q  L  T  Y  I  A  *  R  N  S  S  T  F  F  G  S  S  S  S  *  Y  L  V  I  A  I  V  L  V  C  S  F  R  C  *  A  K  D  N  F  D  T  Y  F  L  Q  L  R  P  S  S  P  L  L  P  V  E  K  *  M  L  K  E  H  S  F  L  D  H  T  F  P  A  I  K  A  A  S  P  I  Q  R  L  V  T  F  A  F  D  Y  I  M  E  Y  N  V  K  F  H  A  N  T  F  Y   </first_frame>
            <second_frame>  L  N  Y  R  L  E  S  *  N  Q  I  W  V  Q  R  H  T  L  L  M  V  S  A  R  N  L  G  E  G  I  Q  *  Q  S  F  T  V  I  C  Q  M  R :   *  I  F  *  H  T  Q  Q  R  W  L  *  L  M  S  S  G  R  Q  L  K  *  *  N  R  C  I  E  L  R  M  K  E  S  A  S  N  A  R  L  I  N  I  L  *  R  C  L  V  T  L  A  G  R  R  K  P  L  M  I  Q  R  Q  L  E  V  H  C  G  T  F  S  E  G  K  M  Y  P  S  *  V  S  I  F  *  S  M  Q  R  N  L  G  T  L  S  V  V  R  L  I  R  F  F  I  Q  S  M  T  R  A  S  T  *  L  W  S  T  R  E  N  *  R  K  N  S  :  G  L  N  L  G  H  L  S  K  D  L  E  S  Q  F  S  F  L  Q  D  A  L  T  K  C  V  I  S  S :   R  V  P  K  L  L  L  I  L  F  L  L  K  T  F  E  N  V  S  A  S  Q  L  S  S  G  H  C  R  K  A  T  R  P  E  K  T  N  *  R :   *  R  R  W  S  F  M  Q  S  T  K  L  S  Q  I  W  S  S  S  H  T  *  L  R  E  I  A  V  L  S  L  A  A  V  A  V  S  I  W  L  L  L  L  S  L  C  V  L  L  G  V  R  P  R  T  I  L  I  H  I  S  C  S  L  G  P  L  H  H  C  C  L  *  K  S  K  C  *  R  N  I  L  F  *  I  I  L  F  L  Q  *  R  Q  L  L  L  Y  R  D  S  *  P  L  H  L  I  T  *  W  N  T  M  *  N  F  M  Q  I  L  S  I  </second_frame>
            <third_frame>   *  I  T  G  W  S  H  K  T  R  F  G  S  K  D  I  H  C  L  W  S  Q  R  G  T  W  E  R  G  F  S  D  K  A  S  L  *  Y  V  R  C   : D  K  Y  F  D  T  H  S  R  D  G  Y  N  *  *  A  A  V  G  N  *  N  S  E  T  D  A  *  S  S  G  *  K  R  A  H  R  M  R  G  *  *  I  S  Y  E  D  V  *  *  H  *  Q  G  G  E  N  L  *  *  F  R  D  N  W  R  C  I  V  G  H  F  Q  K  G  R  C  T  Q  V  E  *  V  S  F  K  A  C  K  G  I  *  A  H  F  L  L  S  G  *  S  G  F  S  S  N  P  *  P  E  L  L  L  N  F  G  A  Q  E  K  T  E  G  R  I  R :   D  *  T  L  D  I  *  A  K  T  W  R  V  S  F  H  S  C  R  M  P  S  P  S  A  *  S  Q   : V  V  Y  Q  S  C  C  *  F  C  F  S  *  K  H  S  R  M  F  P  P  H  S  *  V  Q  D  I  A  E  R  P  Q  G  Q  R  R  Q  T  R   : D  K  E  D  G  P  S  C  N  Q  P  S  C  H  R  F  G  A  A  H  I  H  S  L  E  K  *  Q  Y  F  L  W  Q  Q  *  Q  L  V  F  G  Y  C  Y  C  P  C  V  F  F  *  V  L  G  Q  G  Q  F  *  Y  I  F  L  A  A  *  A  L  F  T  I  V  A  C  R  K  V  N  V  K  G  T  F  F  F  R  S  Y  F  S  C  N  K  G  S  F  S  Y  T  E  T  R  N  L  C  I  *  L  H  N  G  I  Q  C  E  I  S  C  K  Y  F  L  * </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0320D04.2" strand="-"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="68890" stop="68765"/>
                    <exon start="68282" stop="67907"/>
                    <exon start="67815" stop="67730"/>
                    <exon start="67645" stop="67526"/>
                    <exon start="67435" stop="67364"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>777</number_coding_nucleotides>
                  <number_encoded_amino_acids>259</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VKLPAGVIKPDLGPKTYIAYGLSEELGRGDSVTKLHCDMSDAINILTHTAEMAITDEQRSAIEIVKQMHRAQDERERIECEADKYPMKMSSDISREEKTFDDSETTGGALWDIFRREDVPKLSEYLLKHAKEFRHTFCCPVDQVFHPIHDQSFYLTLEHKRKLKEEFGIEPWTFEQRLGESVFIPAGCPHQVRNLKSCTKVAADFVSPENIRECFRLTAEFRTLPKGHKAREDKLEIKKMVLHAINQVVTDLEQLTYIA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="-" PGL_start="69901" PGL_stop="68936"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="69901" e_stop="69355"/>
            <exon e_start="69094" e_stop="68936"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.833" acc_prob="0.988" e_score="0.951"/>
          <exon-only e_score="0.950"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.951">
            <gDNA_exon_boundary e_start="69901" e_stop="69355" e_length="547"/>
          </exon>
          <intron i_serial="1" don_prob="0.833" acc_prob="0.988">
            <gDNA_intron_boundary i_start="69354" i_stop="69095" i_length="260"/>
          </intron>
          <exon e_serial="2" e_score="0.950">
            <gDNA_exon_boundary e_start="69094" e_stop="68936" e_length="159"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69901" stop="69355"/>
              <exon start="69094" stop="68936"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E453895" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69901" stop="69355"/>
              <exon start="69094" stop="68938"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E425122" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CATGCACGGTGGAGACGCAGAGCCTGAACGTTATGATGATATGGAAATTCCACAGGACCAGAACAAACCAATTACTTGGGTTACTAATTATGATGGTAATATCATGTGTGCTCCTGAAGCAATTGGTGGTTGTGGAAATTTTGTACTAGAGCTCAAGCACCTGCTACCAAAAAACTGGATATCAACCTTGGAAGCAAAAGCAGAAAGGATTCTGATTCAATGCAATTTCTCCGAGATTATTTCCCAGCCGATTTGTAGAACGGATGACCCTGAACAGTTACACAGAGCGGCTTCAAGAGTTGGTTCTGATGACAACTACTTGTATTTCCCTACTGCAAAGGACGCAATAAAGGATGATGCACTTTTACACTTTCGTAGACACTGGGCCAAAGGTGAACCAGTGATTGTGCAAAATGTTCTTGCACATACAAGTGGTTTAAGCTGGGAACCAATGGTTATGTGGCGTGCATTGTGTGAGGGCACTGATTCCAAGATCCTTACAAGTATGTCGGAAGTGAAAGCTATCGACTGTCTGGCCAATTGTCAG : GTTCCGATCAATACTCGAAAATTTTTTAAAGGTTATACGGAAGGCAGAAGGTATGAAAATCTTTGGCCTGAAATGCTCAAACTTAAAGATTGGCCACCATCTGACAAGTTTGAGAAAGTCTTGCCTCGGCACTGCGATGAATTCATCAGTGCATTACCA</gDNA_template>
            <first_frame> H  A  R  W  R  R  R  A  *  T  L  *  *  Y  G  N  S  T  G  P  E  Q  T  N  Y  L  G  Y  *  L  *  W  *  Y  H  V  C  S  *  S  N  W  W  L  W  K  F  C  T  R  A  Q  A  P  A  T  K  K  L  D  I  N  L  G  S  K  S  R  K  D  S  D  S  M  Q  F  L  R  D  Y  F  P  A  D  L  *  N  G  *  P  *  T  V  T  Q  S  G  F  K  S  W  F  *  *  Q  L  L  V  F  P  Y  C  K  G  R  N  K  G  *  C  T  F  T  L  S  *  T  L  G  Q  R  *  T  S  D  C  A  K  C  S  C  T  Y  K  W  F  K  L  G  T  N  G  Y  V  A  C  I  V  *  G  H  *  F  Q  D  P  Y  K  Y  V  G  S  E  S  Y  R  L  S  G  Q  L  S   : G  S  D  Q  Y  S  K  I  F  *  R  L  Y  G  R  Q  K  V  *  K  S  L  A  *  N  A  Q  T  *  R  L  A  T  I  *  Q  V  *  E  S  L  A  S  A  L  R  *  I  H  Q  C  I  T  </first_frame>
            <second_frame>  M  H  G  G  D  A  E  P  E  R  Y  D  D  M  E  I  P  Q  D  Q  N  K  P  I  T  W  V  T  N  Y  D  G  N  I  M  C  A  P  E  A  I  G  G  C  G  N  F  V  L  E  L  K  H  L  L  P  K  N  W  I  S  T  L  E  A  K  A  E  R  I  L  I  Q  C  N  F  S  E  I  I  S  Q  P  I  C  R  T  D  D  P  E  Q  L  H  R  A  A  S  R  V  G  S  D  D  N  Y  L  Y  F  P  T  A  K  D  A  I  K  D  D  A  L  L  H  F  R  R  H  W  A  K  G  E  P  V  I  V  Q  N  V  L  A  H  T  S  G  L  S  W  E  P  M  V  M  W  R  A  L  C  E  G  T  D  S  K  I  L  T  S  M  S  E  V  K  A  I  D  C  L  A  N  C  Q  :  V  P  I  N  T  R  K  F  F  K  G  Y  T  E  G  R  R  Y  E  N  L  W  P  E  M  L  K  L  K  D  W  P  P  S  D  K  F  E  K  V  L  P  R  H  C  D  E  F  I  S  A  L  P </second_frame>
            <third_frame>   C  T  V  E  T  Q  S  L  N  V  M  M  I  W  K  F  H  R  T  R  T  N  Q  L  L  G  L  L  I  M  M  V  I  S  C  V  L  L  K  Q  L  V  V  V  E  I  L  Y  *  S  S  S  T  C  Y  Q  K  T  G  Y  Q  P  W  K  Q  K  Q  K  G  F  *  F  N  A  I  S  P  R  L  F  P  S  R  F  V  E  R  M  T  L  N  S  Y  T  E  R  L  Q  E  L  V  L  M  T  T  T  C  I  S  L  L  Q  R  T  Q  *  R  M  M  H  F  Y  T  F  V  D  T  G  P  K  V  N  Q  *  L  C  K  M  F  L  H  I  Q  V  V  *  A  G  N  Q  W  L  C  G  V  H  C  V  R  A  L  I  P  R  S  L  Q  V  C  R  K  *  K  L  S  T  V  W  P  I  V  R :   F  R  S  I  L  E  N  F  L  K  V  I  R  K  A  E  G  M  K  I  F  G  L  K  C  S  N  L  K  I  G  H  H  L  T  S  L  R  K  S  C  L  G  T  A  M  N  S  S  V  H  Y   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0320D04.2" strand="-"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="69900" stop="69355"/>
                    <exon start="69094" stop="68936"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>705</number_coding_nucleotides>
                  <number_encoded_amino_acids>235</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>MHGGDAEPERYDDMEIPQDQNKPITWVTNYDGNIMCAPEAIGGCGNFVLELKHLLPKNWISTLEAKAERILIQCNFSEIISQPICRTDDPEQLHRAASRVGSDDNYLYFPTAKDAIKDDALLHFRRHWAKGEPVIVQNVLAHTSGLSWEPMVMWRALCEGTDSKILTSMSEVKAIDCLANCQVPINTRKFFKGYTEGRRYENLWPEMLKLKDWPPSDKFEKVLPRHCDEFISALP</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="-" PGL_start="94113" PGL_stop="81722"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="94113" e_stop="93494"/>
            <exon e_start="92675" e_stop="92355"/>
            <exon e_start="91467" e_stop="91321"/>
            <exon e_start="90800" e_stop="90665"/>
            <exon e_start="89371" e_stop="89270"/>
            <exon e_start="87751" e_stop="87632"/>
            <exon e_start="87479" e_stop="87399"/>
            <exon e_start="86564" e_stop="86224"/>
            <exon e_start="85314" e_stop="85069"/>
            <exon e_start="83954" e_stop="83630"/>
            <exon e_start="82646" e_stop="82413"/>
            <exon e_start="82281" e_stop="81722"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.919" acc_prob="1.000" e_score="0.908"/>
          <exon-intron don_prob="0.947" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.972" acc_prob="0.987" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="1.000" e_score="0.985"/>
          <exon-intron don_prob="0.953" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.997" e_score="0.983"/>
          <exon-intron don_prob="0.998" acc_prob="0.995" e_score="0.975"/>
          <exon-intron don_prob="0.987" acc_prob="0.986" e_score="0.996"/>
          <exon-intron don_prob="0.916" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.720" e_score="1.000"/>
          <exon-intron don_prob="0.915" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.908">
            <gDNA_exon_boundary e_start="94113" e_stop="93494" e_length="620"/>
          </exon>
          <intron i_serial="1" don_prob="0.919" acc_prob="1.000">
            <gDNA_intron_boundary i_start="93493" i_stop="92676" i_length="818"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="92675" e_stop="92355" e_length="321"/>
          </exon>
          <intron i_serial="2" don_prob="0.947" acc_prob="0.994">
            <gDNA_intron_boundary i_start="92354" i_stop="91468" i_length="887"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="91467" e_stop="91321" e_length="147"/>
          </exon>
          <intron i_serial="3" don_prob="0.972" acc_prob="0.987">
            <gDNA_intron_boundary i_start="91320" i_stop="90801" i_length="520"/>
          </intron>
          <exon e_serial="4" e_score="0.985">
            <gDNA_exon_boundary e_start="90800" e_stop="90665" e_length="136"/>
          </exon>
          <intron i_serial="4" don_prob="0.997" acc_prob="1.000">
            <gDNA_intron_boundary i_start="90664" i_stop="89372" i_length="1293"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="89371" e_stop="89270" e_length="102"/>
          </exon>
          <intron i_serial="5" don_prob="0.953" acc_prob="0.996">
            <gDNA_intron_boundary i_start="89269" i_stop="87752" i_length="1518"/>
          </intron>
          <exon e_serial="6" e_score="0.983">
            <gDNA_exon_boundary e_start="87751" e_stop="87632" e_length="120"/>
          </exon>
          <intron i_serial="6" don_prob="0.995" acc_prob="0.997">
            <gDNA_intron_boundary i_start="87631" i_stop="87480" i_length="152"/>
          </intron>
          <exon e_serial="7" e_score="0.975">
            <gDNA_exon_boundary e_start="87479" e_stop="87399" e_length="81"/>
          </exon>
          <intron i_serial="7" don_prob="0.998" acc_prob="0.995">
            <gDNA_intron_boundary i_start="87398" i_stop="86565" i_length="834"/>
          </intron>
          <exon e_serial="8" e_score="0.996">
            <gDNA_exon_boundary e_start="86564" e_stop="86224" e_length="341"/>
          </exon>
          <intron i_serial="8" don_prob="0.987" acc_prob="0.986">
            <gDNA_intron_boundary i_start="86223" i_stop="85315" i_length="909"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="85314" e_stop="85069" e_length="246"/>
          </exon>
          <intron i_serial="9" don_prob="0.916" acc_prob="0.996">
            <gDNA_intron_boundary i_start="85068" i_stop="83955" i_length="1114"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="83954" e_stop="83630" e_length="325"/>
          </exon>
          <intron i_serial="10" don_prob="0.998" acc_prob="0.720">
            <gDNA_intron_boundary i_start="83629" i_stop="82647" i_length="983"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="82646" e_stop="82413" e_length="234"/>
          </exon>
          <intron i_serial="11" don_prob="0.915" acc_prob="0.999">
            <gDNA_intron_boundary i_start="82412" i_stop="82282" i_length="131"/>
          </intron>
          <exon e_serial="12" e_score="1.000">
            <gDNA_exon_boundary e_start="82281" e_stop="81722" e_length="560"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94113" stop="93494"/>
              <exon start="92675" stop="92615"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E710898" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="93963" stop="93498"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E341650" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="93771" stop="93494"/>
              <exon start="92675" stop="92355"/>
              <exon start="91467" stop="91321"/>
              <exon start="90800" stop="90701"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E738108" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="93648" stop="93494"/>
              <exon start="92675" stop="92398"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E440242" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="93603" stop="93494"/>
              <exon start="92675" stop="92355"/>
              <exon start="91467" stop="91321"/>
              <exon start="90800" stop="90767"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E299866" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="93603" stop="93494"/>
              <exon start="92675" stop="92355"/>
              <exon start="91467" stop="91359"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E299744" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="93523" stop="93494"/>
              <exon start="92675" stop="92355"/>
              <exon start="91467" stop="91321"/>
              <exon start="90800" stop="90770"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E367706" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92619" stop="92355"/>
              <exon start="91467" stop="91321"/>
              <exon start="90800" stop="90665"/>
              <exon start="89371" stop="89323"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E453427" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="89340" stop="89270"/>
              <exon start="87751" stop="87632"/>
              <exon start="87479" stop="87399"/>
              <exon start="86564" stop="86307"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E365243" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="86365" stop="86224"/>
              <exon start="85314" stop="85069"/>
              <exon start="83954" stop="83630"/>
              <exon start="82646" stop="82612"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E543510" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="86364" stop="86224"/>
              <exon start="85314" stop="85069"/>
              <exon start="83954" stop="83814"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E304812" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="85272" stop="85069"/>
              <exon start="83954" stop="83630"/>
              <exon start="82646" stop="82413"/>
              <exon start="82281" stop="82249"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E737517" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="85095" stop="85069"/>
              <exon start="83954" stop="83630"/>
              <exon start="82646" stop="82413"/>
              <exon start="82281" stop="82228"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E699135" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83894" stop="83630"/>
              <exon start="82646" stop="82413"/>
              <exon start="82281" stop="81978"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E705440" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83818" stop="83630"/>
              <exon start="82646" stop="82413"/>
              <exon start="82281" stop="81899"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E706435" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83784" stop="83630"/>
              <exon start="82646" stop="82413"/>
              <exon start="82281" stop="82019"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E371142" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83784" stop="83630"/>
              <exon start="82646" stop="82413"/>
              <exon start="82281" stop="82207"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E272008" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83706" stop="83630"/>
              <exon start="82646" stop="82487"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E598359" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83659" stop="83630"/>
              <exon start="82646" stop="82413"/>
              <exon start="82281" stop="82010"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E235633" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83653" stop="83630"/>
              <exon start="82646" stop="82413"/>
              <exon start="82281" stop="81722"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E543509" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82619" stop="82413"/>
              <exon start="82281" stop="81992"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E283953" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82462" stop="82413"/>
              <exon start="82281" stop="81722"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E371141" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82132" stop="81722"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E227225" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82065" stop="81722"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E227428" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AACTCTAATTATAAAAAAAAAAAGAAAAAATTAATTCCATTATTTAATAGGAGTAGTGTTTATTTTATTTTATTTATTGCTCTAGACAATTGAAGAAGAGAGATCGATTCGTTTGTCAAAACAAAACAAAAAAAAAAAACGTTACCATCATTTCTCCTAACAGTATCTGTGCTGAAAAACACCTTTGCTTTCATCTTCAATCCTATCCCAACACAGTTCATGGACTTGTGTGCAAAAAACTTCAATTTTCTTGCATAGTTTTCATTATTATCCAAAACAGTGCAAGAAAAATATCTTCTTGATTTGGTGGGTGGTGTTCTGTTGGAAAAAACTAACTTGCCACTTTCTTTTCTTGAATTATTTTCCTATTATGGTGAATACATTTTCTTCTCAATATTATCCAAAATAACTACATTACGTTATTGTGACTTGGTGGGGTTTTGGTTTATTAGGGGTTGGAGTTTAGTTAAAGTAGAAGAAAGGGGAAAAAGTGACAACTGTTGGCTTTTATGGAGCTTTGAAGTTATTGTACTTCTCCGATCGGCTATTGCTACTCTGCTGCTCTGTTATACTCAGCAGCTCTGTAATTGGAAAGAGATTTATAATCACAACTCACAATA : GTACTAGATGGCGACACTTGGAGATATAGGCCTTGCAGCAGCAATAAATATTATATCTGCCTTGATCTTTCTTGTGGCATTTGCAATTTTGCGGCTCCAACCATTCAATGACAGAGTTTATTTCCCCAAATGGTATCTTAAGGGGCTGAGACACAGTCCCACCCACTCTGGGGCATTCGTCGCCAAATTTGTTAATGTTGATTGGAGAGCATATATAAGGTTTCTGAACTGGATACCAGATGCTCTGAAAATGCCTGAACCTGAGCTTATTGACCATGCAGGGTTGGACTCTGCTGTTTATTTGCGCATATACTTGCTAGG : GCTAAAAATCTTTGTTCCCATAACGTTGCTTGCATGGGCTATCCTGGTACCTGTAAATTGGACAAATAGCACTCTGACAAAATCCGACTTTACTTATAGTGACATTGATAAGCTTTCCATTTCAAATGTTCCGCTTGGATCTCTCAG : GTTTTGGACTCATATTGTTATGGCTTATGCCTTCTCATTCTGGACCTGCTATGTCTTAAAAACTGAGTATGCAAAAGTTGCAGCCATGAGGTTGCAGTTTGTCGCCTCTGAAAAACGTCGTCCCGACCAATATACA : GTCCTTGTTAGGAATGTTCCGCCAGATGCTGATGAATCAGTTAGTGAATGTGTGGAGCACTTTTTCCTGGTTAACCATCAAGATCATTATCTCATGCATCAG : GGTGTTTATAATGCCAACAAACTGGCAAAATTGGTGAAGGAGAAGAAGAGTAAGCAAAATTGGCTCGACTATTACCAACTTAAGTACTCTAGGGATCAATCAAAACGGCCTATGATGAAG : ACTGGTTTCCTTGGATGCTTTGGAGCAAAAGTCGACGCAATTGAGCATCAGATTGCTGAAATTGAAAGATTGACAAAAGAG : ATAGCTGAAGAGAAACAAAGGGTAGAAAAAGACCCAAAGTCTACCATGCCTGCATCATTTGTCTCCTTCAAATCGCGGTGGGGTGCTGCTGTTTGTGCACAAACACAGCAATCCAGAAATCCAACCTTGTGGTTGACAGAATGGGCTCCAGAGCCACGTGATGTATTTTGGGATAACCTGGCAATCCCCTATGTTTCTTTGACAATTAGGAAGCTCATCATTGCTGTTGCCTTCTTTTTTCTGACATTCTTCTTCATGATCCCGATTGCATTTGTCCAAACCCTTGCCAGCCTTGAGGGGATTAGGAAGAAAGCACCATTTCTGAAAGTTATTATTGACGA : ACCTTTCATCAAGGCGTTCATCCAAGGTTTTCTACCTGGGATTGCTTTGAAGATCTTTCTCATATTTCTGCCAACTATATTGATGATGATGTCCAAATTCGAGGGCTGGCTAAGCATATCAGCTCTAGAGAGGAAATCTGCGTCTAAATACTACATCTTCACTATCGTGAATGTGTTCCTCGGGAACATAATTGCAGGAGCTGCATTTGAACAACTAAGTACCTTTCTCAATCAGTCGGCAAACCA : AATCCCTAAAACGATTGGTGTCGCAGTTCCTATGAAAGCATCCTTCTTCATAACCTACATAATGGTTGACGGCTGGGCTGGTATTGCTGGAGAGATCCTAAGGCTGAAGCCGCTAATATTTTACCACTTGAAGAACTTTTTCTTGGTTAAGACGGAAAAAGATAGAGAAGAGGCAATGGATCCTGGAAGCGTTGGTTTCAACACAGGAGAACCACAGATACAATTATATTTCTTATTGGGGCTTGTCTATGCTGTGGTCACACCATTTCTGCTTCCGTTCATATTGGTCTTCTTTGGCCTTGCATATGTAGTATATCGTCATCAG : ATTATAAATGTTTACAATCAGGAGTACGAAAGTGCAGCAGCATTCTGGCCAGATGTTCATGGACGTATAATTTTCGCACTGTGCTTTTCTCAGTTATCTTTACTAGGCTTGCTAAGTACAAAACATGCTACTCAGTCAGCACCTTTCCTGATTGCCCTTCCAGTGCTGACCATCTCATTTCACTTGTACTGCAAAGGTCGTTATGAGCCAGCTTTCACCAAATATCCGATACAG : GAAGCAAGGATGAGAGATACTCTGGAACAAGCAAGGGAACCAAATCTTAATCTGAAGGGCTACCTTCAAAATGCTTATGTGCATCCTGTTTTCAAAGACGACGATGAAGATGAGGATGAAGACTTTATGATGAAACTGGAGAACGATAGCGTTCTTGTCCCCACAAAACGCCAGTCAAGAATGAATACACCAGTTCCCAGCAAAGTCAGCGCTGGCTCATCTCCATCACTTCCTGATGCAGTTACTCATGAACATTAAACAGCTTAGAATGATAGGTTGGAATATTTCACCTCCTTTGTGCATGAGAGTTAGATCGCGGAGACTCAACCTTAACTAAGTTGTACAGAGAGCACTTCAACACATCATAGTTGAGCTGGCTGGACCAGTTTACATTGGGACGGTTGGCGTTGAAAGTACAAAAAATTGTAAAGAGCTCCGGTGGTAGCATTAGAAGTTTTGTACACTTAAGGATGTTCATATTTTTAGCATTTGCTGGTTGTTGACACTCAGGATATAATCTTGTACACGAGCTTTCTAAGGGAATGTATTTATTTTTATCG</gDNA_template>
            <first_frame> N  S  N  Y  K  K  K  K  K  K  L  I  P  L  F  N  R  S  S  V  Y  F  I  L  F  I  A  L  D  N  *  R  R  E  I  D  S  F  V  K  T  K  Q  K  K  K  T  L  P  S  F  L  L  T  V  S  V  L  K  N  T  F  A  F  I  F  N  P  I  P  T  Q  F  M  D  L  C  A  K  N  F  N  F  L  A  *  F  S  L  L  S  K  T  V  Q  E  K  Y  L  L  D  L  V  G  G  V  L  L  E  K  T  N  L  P  L  S  F  L  E  L  F  S  Y  Y  G  E  Y  I  F  F  S  I  L  S  K  I  T  T  L  R  Y  C  D  L  V  G  F  W  F  I  R  G  W  S  L  V  K  V  E  E  R  G  K  S  D  N  C  W  L  L  W  S  F  E  V  I  V  L  L  R  S  A  I  A  T  L  L  L  C  Y  T  Q  Q  L  C  N  W  K  E  I  Y  N  H  N  S  Q  * :   Y  *  M  A  T  L  G  D  I  G  L  A  A  A  I  N  I  I  S  A  L  I  F  L  V  A  F  A  I  L  R  L  Q  P  F  N  D  R  V  Y  F  P  K  W  Y  L  K  G  L  R  H  S  P  T  H  S  G  A  F  V  A  K  F  V  N  V  D  W  R  A  Y  I  R  F  L  N  W  I  P  D  A  L  K  M  P  E  P  E  L  I  D  H  A  G  L  D  S  A  V  Y  L  R  I  Y  L  L  G :   L  K  I  F  V  P  I  T  L  L  A  W  A  I  L  V  P  V  N  W  T  N  S  T  L  T  K  S  D  F  T  Y  S  D  I  D  K  L  S  I  S  N  V  P  L  G  S  L  R :   F  W  T  H  I  V  M  A  Y  A  F  S  F  W  T  C  Y  V  L  K  T  E  Y  A  K  V  A  A  M  R  L  Q  F  V  A  S  E  K  R  R  P  D  Q  Y  T  :  V  L  V  R  N  V  P  P  D  A  D  E  S  V  S  E  C  V  E  H  F  F  L  V  N  H  Q  D  H  Y  L  M  H  Q  :  G  V  Y  N  A  N  K  L  A  K  L  V  K  E  K  K  S  K  Q  N  W  L  D  Y  Y  Q  L  K  Y  S  R  D  Q  S  K  R  P  M  M  K  :  T  G  F  L  G  C  F  G  A  K  V  D  A  I  E  H  Q  I  A  E  I  E  R  L  T  K  E  :  I  A  E  E  K  Q  R  V  E  K  D  P  K  S  T  M  P  A  S  F  V  S  F  K  S  R  W  G  A  A  V  C  A  Q  T  Q  Q  S  R  N  P  T  L  W  L  T  E  W  A  P  E  P  R  D  V  F  W  D  N  L  A  I  P  Y  V  S  L  T  I  R  K  L  I  I  A  V  A  F  F  F  L  T  F  F  F  M  I  P  I  A  F  V  Q  T  L  A  S  L  E  G  I  R  K  K  A  P  F  L  K  V  I  I  D  E :   P  F  I  K  A  F  I  Q  G  F  L  P  G  I  A  L  K  I  F  L  I  F  L  P  T  I  L  M  M  M  S  K  F  E  G  W  L  S  I  S  A  L  E  R  K  S  A  S  K  Y  Y  I  F  T  I  V  N  V  F  L  G  N  I  I  A  G  A  A  F  E  Q  L  S  T  F  L  N  Q  S  A  N  Q :   I  P  K  T  I  G  V  A  V  P  M  K  A  S  F  F  I  T  Y  I  M  V  D  G  W  A  G  I  A  G  E  I  L  R  L  K  P  L  I  F  Y  H  L  K  N  F  F  L  V  K  T  E  K  D  R  E  E  A  M  D  P  G  S  V  G  F  N  T  G  E  P  Q  I  Q  L  Y  F  L  L  G  L  V  Y  A  V  V  T  P  F  L  L  P  F  I  L  V  F  F  G  L  A  Y  V  V  Y  R  H  Q  :  I  I  N  V  Y  N  Q  E  Y  E  S  A  A  A  F  W  P  D  V  H  G  R  I  I  F  A  L  C  F  S  Q  L  S  L  L  G  L  L  S  T  K  H  A  T  Q  S  A  P  F  L  I  A  L  P  V  L  T  I  S  F  H  L  Y  C  K  G  R  Y  E  P  A  F  T  K  Y  P  I  Q  :  E  A  R  M  R  D  T  L  E  Q  A  R  E  P  N  L  N  L  K  G  Y  L  Q  N  A  Y  V  H  P  V  F  K  D  D  D  E  D  E  D  E  D  F  M  M  K  L  E  N  D  S  V  L  V  P  T  K  R  Q  S  R  M  N  T  P  V  P  S  K  V  S  A  G  S  S  P  S  L  P  D  A  V  T  H  E  H  *  T  A  *  N  D  R  L  E  Y  F  T  S  F  V  H  E  S  *  I  A  E  T  Q  P  *  L  S  C  T  E  S  T  S  T  H  H  S  *  A  G  W  T  S  L  H  W  D  G  W  R  *  K  Y  K  K  L  *  R  A  P  V  V  A  L  E  V  L  Y  T  *  G  C  S  Y  F  *  H  L  L  V  V  D  T  Q  D  I  I  L  Y  T  S  F  L  R  E  C  I  Y  F  Y   </first_frame>
            <second_frame>  T  L  I  I  K  K  K  R  K  N  *  F  H  Y  L  I  G  V  V  F  I  L  F  Y  L  L  L  *  T  I  E  E  E  R  S  I  R  L  S  K  Q  N  K  K  K  K  R  Y  H  H  F  S  *  Q  Y  L  C  *  K  T  P  L  L  S  S  S  I  L  S  Q  H  S  S  W  T  C  V  Q  K  T  S  I  F  L  H  S  F  H  Y  Y  P  K  Q  C  K  K  N  I  F  L  I  W  W  V  V  F  C  W  K  K  L  T  C  H  F  L  F  L  N  Y  F  P  I  M  V  N  T  F  S  S  Q  Y  Y  P  K  *  L  H  Y  V  I  V  T  W  W  G  F  G  L  L  G  V  G  V  *  L  K  *  K  K  G  E  K  V  T  T  V  G  F  Y  G  A  L  K  L  L  Y  F  S  D  R  L  L  L  L  C  C  S  V  I  L  S  S  S  V  I  G  K  R  F  I  I  T  T  H  N   : S  T  R  W  R  H  L  E  I  *  A  L  Q  Q  Q  *  I  L  Y  L  P  *  S  F  L  W  H  L  Q  F  C  G  S  N  H  S  M  T  E  F  I  S  P  N  G  I  L  R  G  *  D  T  V  P  P  T  L  G  H  S  S  P  N  L  L  M  L  I  G  E  H  I  *  G  F  *  T  G  Y  Q  M  L  *  K  C  L  N  L  S  L  L  T  M  Q  G  W  T  L  L  F  I  C  A  Y  T  C  *   : G  *  K  S  L  F  P  *  R  C  L  H  G  L  S  W  Y  L  *  I  G  Q  I  A  L  *  Q  N  P  T  L  L  I  V  T  L  I  S  F  P  F  Q  M  F  R  L  D  L  S   : G  F  G  L  I  L  L  W  L  M  P  S  H  S  G  P  A  M  S  *  K  L  S  M  Q  K  L  Q  P  *  G  C  S  L  S  P  L  K  N  V  V  P  T  N  I  Q :   S  L  L  G  M  F  R  Q  M  L  M  N  Q  L  V  N  V  W  S  T  F  S  W  L  T  I  K  I  I  I  S  C  I  R :   V  F  I  M  P  T  N  W  Q  N  W  *  R  R  R  R  V  S  K  I  G  S  T  I  T  N  L  S  T  L  G  I  N  Q  N  G  L  *  *  R :   L  V  S  L  D  A  L  E  Q  K  S  T  Q  L  S  I  R  L  L  K  L  K  D  *  Q  K  R :   *  L  K  R  N  K  G  *  K  K  T  Q  S  L  P  C  L  H  H  L  S  P  S  N  R  G  G  V  L  L  F  V  H  K  H  S  N  P  E  I  Q  P  C  G  *  Q  N  G  L  Q  S  H  V  M  Y  F  G  I  T  W  Q  S  P  M  F  L  *  Q  L  G  S  S  S  L  L  L  P  S  F  F  *  H  S  S  S  *  S  R  L  H  L  S  K  P  L  P  A  L  R  G  L  G  R  K  H  H  F  *  K  L  L  L  T   : N  L  S  S  R  R  S  S  K  V  F  Y  L  G  L  L  *  R  S  F  S  Y  F  C  Q  L  Y  *  *  *  C  P  N  S  R  A  G  *  A  Y  Q  L  *  R  G  N  L  R  L  N  T  T  S  S  L  S  *  M  C  S  S  G  T  *  L  Q  E  L  H  L  N  N  *  V  P  F  S  I  S  R  Q  T   : K  S  L  K  R  L  V  S  Q  F  L  *  K  H  P  S  S  *  P  T  *  W  L  T  A  G  L  V  L  L  E  R  S  *  G  *  S  R  *  Y  F  T  T  *  R  T  F  S  W  L  R  R  K  K  I  E  K  R  Q  W  I  L  E  A  L  V  S  T  Q  E  N  H  R  Y  N  Y  I  S  Y  W  G  L  S  M  L  W  S  H  H  F  C  F  R  S  Y  W  S  S  L  A  L  H  M  *  Y  I  V  I  R :   L  *  M  F  T  I  R  S  T  K  V  Q  Q  H  S  G  Q  M  F  M  D  V  *  F  S  H  C  A  F  L  S  Y  L  Y  *  A  C  *  V  Q  N  M  L  L  S  Q  H  L  S  *  L  P  F  Q  C  *  P  S  H  F  T  C  T  A  K  V  V  M  S  Q  L  S  P  N  I  R  Y  R :   K  Q  G  *  E  I  L  W  N  K  Q  G  N  Q  I  L  I  *  R  A  T  F  K  M  L  M  C  I  L  F  S  K  T  T  M  K  M  R  M  K  T  L  *  *  N  W  R  T  I  A  F  L  S  P  Q  N  A  S  Q  E  *  I  H  Q  F  P  A  K  S  A  L  A  H  L  H  H  F  L  M  Q  L  L  M  N  I  K  Q  L  R  M  I  G  W  N  I  S  P  P  L  C  M  R  V  R  S  R  R  L  N  L  N  *  V  V  Q  R  A  L  Q  H  I  I  V  E  L  A  G  P  V  Y  I  G  T  V  G  V  E  S  T  K  N  C  K  E  L  R  W  *  H  *  K  F  C  T  L  K  D  V  H  I  F  S  I  C  W  L  L  T  L  R  I  *  S  C  T  R  A  F  *  G  N  V  F  I  F  I  </second_frame>
            <third_frame>   L  *  L  *  K  K  K  E  K  I  N  S  I  I  *  *  E  *  C  L  F  Y  F  I  Y  C  S  R  Q  L  K  K  R  D  R  F  V  C  Q  N  K  T  K  K  K  N  V  T  I  I  S  P  N  S  I  C  A  E  K  H  L  C  F  H  L  Q  S  Y  P  N  T  V  H  G  L  V  C  K  K  L  Q  F  S  C  I  V  F  I  I  I  Q  N  S  A  R  K  I  S  S  *  F  G  G  W  C  S  V  G  K  N  *  L  A  T  F  F  S  *  I  I  F  L  L  W  *  I  H  F  L  L  N  I  I  Q  N  N  Y  I  T  L  L  *  L  G  G  V  L  V  Y  *  G  L  E  F  S  *  S  R  R  K  G  K  K  *  Q  L  L  A  F  M  E  L  *  S  Y  C  T  S  P  I  G  Y  C  Y  S  A  A  L  L  Y  S  A  A  L  *  L  E  R  D  L  *  S  Q  L  T  I  :  V  L  D  G  D  T  W  R  Y  R  P  C  S  S  N  K  Y  Y  I  C  L  D  L  S  C  G  I  C  N  F  A  A  P  T  I  Q  *  Q  S  L  F  P  Q  M  V  S  *  G  A  E  T  Q  S  H  P  L  W  G  I  R  R  Q  I  C  *  C  *  L  E  S  I  Y  K  V  S  E  L  D  T  R  C  S  E  N  A  *  T  *  A  Y  *  P  C  R  V  G  L  C  C  L  F  A  H  I  L  A  R  :  A  K  N  L  C  S  H  N  V  A  C  M  G  Y  P  G  T  C  K  L  D  K  *  H  S  D  K  I  R  L  Y  L  *  *  H  *  *  A  F  H  F  K  C  S  A  W  I  S  Q  :  V  L  D  S  Y  C  Y  G  L  C  L  L  I  L  D  L  L  C  L  K  N  *  V  C  K  S  C  S  H  E  V  A  V  C  R  L  *  K  T  S  S  R  P  I  Y   : S  P  C  *  E  C  S  A  R  C  *  *  I  S  *  *  M  C  G  A  L  F  P  G  *  P  S  R  S  L  S  H  A  S   : G  C  L  *  C  Q  Q  T  G  K  I  G  E  G  E  E  E  *  A  K  L  A  R  L  L  P  T  *  V  L  *  G  S  I  K  T  A  Y  D  E   : D  W  F  P  W  M  L  W  S  K  S  R  R  N  *  A  S  D  C  *  N  *  K  I  D  K  R   : D  S  *  R  E  T  K  G  R  K  R  P  K  V  Y  H  A  C  I  I  C  L  L  Q  I  A  V  G  C  C  C  L  C  T  N  T  A  I  Q  K  S  N  L  V  V  D  R  M  G  S  R  A  T  *  C  I  L  G  *  P  G  N  P  L  C  F  F  D  N  *  E  A  H  H  C  C  C  L  L  F  S  D  I  L  L  H  D  P  D  C  I  C  P  N  P  C  Q  P  *  G  D  *  E  E  S  T  I  S  E  S  Y  Y  *  R  :  T  F  H  Q  G  V  H  P  R  F  S  T  W  D  C  F  E  D  L  S  H  I  S  A  N  Y  I  D  D  D  V  Q  I  R  G  L  A  K  H  I  S  S  R  E  E  I  C  V  *  I  L  H  L  H  Y  R  E  C  V  P  R  E  H  N  C  R  S  C  I  *  T  T  K  Y  L  S  Q  S  V  G  K  P  :  N  P  *  N  D  W  C  R  S  S  Y  E  S  I  L  L  H  N  L  H  N  G  *  R  L  G  W  Y  C  W  R  D  P  K  A  E  A  A  N  I  L  P  L  E  E  L  F  L  G  *  D  G  K  R  *  R  R  G  N  G  S  W  K  R  W  F  Q  H  R  R  T  T  D  T  I  I  F  L  I  G  A  C  L  C  C  G  H  T  I  S  A  S  V  H  I  G  L  L  W  P  C  I  C  S  I  S  S  S   : D  Y  K  C  L  Q  S  G  V  R  K  C  S  S  I  L  A  R  C  S  W  T  Y  N  F  R  T  V  L  F  S  V  I  F  T  R  L  A  K  Y  K  T  C  Y  S  V  S  T  F  P  D  C  P  S  S  A  D  H  L  I  S  L  V  L  Q  R  S  L  *  A  S  F  H  Q  I  S  D  T   : G  S  K  D  E  R  Y  S  G  T  S  K  G  T  K  S  *  S  E  G  L  P  S  K  C  L  C  A  S  C  F  Q  R  R  R  *  R  *  G  *  R  L  Y  D  E  T  G  E  R  *  R  S  C  P  H  K  T  P  V  K  N  E  Y  T  S  S  Q  Q  S  Q  R  W  L  I  S  I  T  S  *  C  S  Y  S  *  T  L  N  S  L  E  *  *  V  G  I  F  H  L  L  C  A  *  E  L  D  R  G  D  S  T  L  T  K  L  Y  R  E  H  F  N  T  S  *  L  S  W  L  D  Q  F  T  L  G  R  L  A  L  K  V  Q  K  I  V  K  S  S  G  G  S  I  R  S  F  V  H  L  R  M  F  I  F  L  A  F  A  G  C  *  H  S  G  Y  N  L  V  H  E  L  S  K  G  M  Y  L  F  L  S </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0320D04.2" strand="-"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="92668" stop="92355"/>
                    <exon start="91467" stop="91321"/>
                    <exon start="90800" stop="90665"/>
                    <exon start="89371" stop="89270"/>
                    <exon start="87751" stop="87632"/>
                    <exon start="87479" stop="87399"/>
                    <exon start="86564" stop="86224"/>
                    <exon start="85314" stop="85069"/>
                    <exon start="83954" stop="83630"/>
                    <exon start="82646" stop="82413"/>
                    <exon start="82281" stop="82024"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>2301</number_coding_nucleotides>
                  <number_encoded_amino_acids>767</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>MATLGDIGLAAAINIISALIFLVAFAILRLQPFNDRVYFPKWYLKGLRHSPTHSGAFVAKFVNVDWRAYIRFLNWIPDALKMPEPELIDHAGLDSAVYLRIYLLGLKIFVPITLLAWAILVPVNWTNSTLTKSDFTYSDIDKLSISNVPLGSLRFWTHIVMAYAFSFWTCYVLKTEYAKVAAMRLQFVASEKRRPDQYTVLVRNVPPDADESVSECVEHFFLVNHQDHYLMHQGVYNANKLAKLVKEKKSKQNWLDYYQLKYSRDQSKRPMMKTGFLGCFGAKVDAIEHQIAEIERLTKEIAEEKQRVEKDPKSTMPASFVSFKSRWGAAVCAQTQQSRNPTLWLTEWAPEPRDVFWDNLAIPYVSLTIRKLIIAVAFFFLTFFFMIPIAFVQTLASLEGIRKKAPFLKVIIDEPFIKAFIQGFLPGIALKIFLIFLPTILMMMSKFEGWLSISALERKSASKYYIFTIVNVFLGNIIAGAAFEQLSTFLNQSANQIPKTIGVAVPMKASFFITYIMVDGWAGIAGEILRLKPLIFYHLKNFFLVKTEKDREEAMDPGSVGFNTGEPQIQLYFLLGLVYAVVTPFLLPFILVFFGLAYVVYRHQIINVYNQEYESAAAFWPDVHGRIIFALCFSQLSLLGLLSTKHATQSAPFLIALPVLTISFHLYCKGRYEPAFTKYPIQEARMRDTLEQAREPNLNLKGYLQNAYVHPVFKDDDEDEDEDFMMKLENDSVLVPTKRQSRMNTPVPSKVSAGSSPSLPDAVTHEH*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0320D04.2" strand="-"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="93855" stop="92675"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>360</number_coding_nucleotides>
                  <number_encoded_amino_acids>120</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FSLLSKTVQEKYLLDLVGGVLLEKTNLPLSFLELFSYYGEYIFFSILSKITTLRYCDLVGFWFIRGWSLVKVEERGKSDNCWLLWSFEVIVLLRSAIATLLLCYTQQLCNWKEIYNHNSQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="94113" e_stop="93494"/>
            <exon e_start="92675" e_stop="92355"/>
            <exon e_start="90800" e_stop="90665"/>
            <exon e_start="89371" e_stop="89270"/>
            <exon e_start="87751" e_stop="87632"/>
            <exon e_start="87479" e_stop="87399"/>
            <exon e_start="86564" e_stop="86224"/>
            <exon e_start="85314" e_stop="85069"/>
            <exon e_start="83954" e_stop="83630"/>
            <exon e_start="82646" e_stop="82413"/>
            <exon e_start="82281" e_stop="81722"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.919" acc_prob="1.000" e_score="0.908"/>
          <exon-intron don_prob="0.947" acc_prob="0.987" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.953" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.987" acc_prob="0.986" e_score="1.000"/>
          <exon-intron don_prob="0.916" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.720" e_score="1.000"/>
          <exon-intron don_prob="0.915" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.908">
            <gDNA_exon_boundary e_start="94113" e_stop="93494" e_length="620"/>
          </exon>
          <intron i_serial="1" don_prob="0.919" acc_prob="1.000">
            <gDNA_intron_boundary i_start="93493" i_stop="92676" i_length="818"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="92675" e_stop="92355" e_length="321"/>
          </exon>
          <intron i_serial="2" don_prob="0.947" acc_prob="0.987">
            <gDNA_intron_boundary i_start="92354" i_stop="90801" i_length="1554"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="90800" e_stop="90665" e_length="136"/>
          </exon>
          <intron i_serial="3" don_prob="0.997" acc_prob="1.000">
            <gDNA_intron_boundary i_start="90664" i_stop="89372" i_length="1293"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="89371" e_stop="89270" e_length="102"/>
          </exon>
          <intron i_serial="4" don_prob="0.953" acc_prob="0.996">
            <gDNA_intron_boundary i_start="89269" i_stop="87752" i_length="1518"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="87751" e_stop="87632" e_length="120"/>
          </exon>
          <intron i_serial="5" don_prob="0.995" acc_prob="0.997">
            <gDNA_intron_boundary i_start="87631" i_stop="87480" i_length="152"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="87479" e_stop="87399" e_length="81"/>
          </exon>
          <intron i_serial="6" don_prob="0.998" acc_prob="0.995">
            <gDNA_intron_boundary i_start="87398" i_stop="86565" i_length="834"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="86564" e_stop="86224" e_length="341"/>
          </exon>
          <intron i_serial="7" don_prob="0.987" acc_prob="0.986">
            <gDNA_intron_boundary i_start="86223" i_stop="85315" i_length="909"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="85314" e_stop="85069" e_length="246"/>
          </exon>
          <intron i_serial="8" don_prob="0.916" acc_prob="0.996">
            <gDNA_intron_boundary i_start="85068" i_stop="83955" i_length="1114"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="83954" e_stop="83630" e_length="325"/>
          </exon>
          <intron i_serial="9" don_prob="0.998" acc_prob="0.720">
            <gDNA_intron_boundary i_start="83629" i_stop="82647" i_length="983"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="82646" e_stop="82413" e_length="234"/>
          </exon>
          <intron i_serial="10" don_prob="0.915" acc_prob="0.999">
            <gDNA_intron_boundary i_start="82412" i_stop="82282" i_length="131"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="82281" e_stop="81722" e_length="560"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94113" stop="93494"/>
              <exon start="92675" stop="92615"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E710898" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="93963" stop="93498"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E341650" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="93690" stop="93494"/>
              <exon start="92675" stop="92355"/>
              <exon start="90800" stop="90665"/>
              <exon start="89371" stop="89270"/>
              <exon start="87751" stop="87632"/>
              <exon start="87479" stop="87399"/>
              <exon start="86564" stop="86224"/>
              <exon start="85314" stop="85069"/>
              <exon start="83954" stop="83630"/>
              <exon start="82646" stop="82413"/>
              <exon start="82281" stop="81738"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E745647" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="93648" stop="93494"/>
              <exon start="92675" stop="92398"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E440242" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="89340" stop="89270"/>
              <exon start="87751" stop="87632"/>
              <exon start="87479" stop="87399"/>
              <exon start="86564" stop="86307"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E365243" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="86365" stop="86224"/>
              <exon start="85314" stop="85069"/>
              <exon start="83954" stop="83630"/>
              <exon start="82646" stop="82612"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E543510" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="86364" stop="86224"/>
              <exon start="85314" stop="85069"/>
              <exon start="83954" stop="83814"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E304812" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="85272" stop="85069"/>
              <exon start="83954" stop="83630"/>
              <exon start="82646" stop="82413"/>
              <exon start="82281" stop="82249"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E737517" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="85095" stop="85069"/>
              <exon start="83954" stop="83630"/>
              <exon start="82646" stop="82413"/>
              <exon start="82281" stop="82228"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E699135" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83894" stop="83630"/>
              <exon start="82646" stop="82413"/>
              <exon start="82281" stop="81978"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E705440" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83818" stop="83630"/>
              <exon start="82646" stop="82413"/>
              <exon start="82281" stop="81899"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E706435" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83784" stop="83630"/>
              <exon start="82646" stop="82413"/>
              <exon start="82281" stop="82019"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E371142" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83784" stop="83630"/>
              <exon start="82646" stop="82413"/>
              <exon start="82281" stop="82207"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E272008" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83706" stop="83630"/>
              <exon start="82646" stop="82487"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E598359" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83659" stop="83630"/>
              <exon start="82646" stop="82413"/>
              <exon start="82281" stop="82010"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E235633" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83653" stop="83630"/>
              <exon start="82646" stop="82413"/>
              <exon start="82281" stop="81722"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E543509" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82619" stop="82413"/>
              <exon start="82281" stop="81992"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E283953" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82462" stop="82413"/>
              <exon start="82281" stop="81722"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E371141" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82132" stop="81722"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E227225" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82065" stop="81722"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E227428" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AACTCTAATTATAAAAAAAAAAAGAAAAAATTAATTCCATTATTTAATAGGAGTAGTGTTTATTTTATTTTATTTATTGCTCTAGACAATTGAAGAAGAGAGATCGATTCGTTTGTCAAAACAAAACAAAAAAAAAAAACGTTACCATCATTTCTCCTAACAGTATCTGTGCTGAAAAACACCTTTGCTTTCATCTTCAATCCTATCCCAACACAGTTCATGGACTTGTGTGCAAAAAACTTCAATTTTCTTGCATAGTTTTCATTATTATCCAAAACAGTGCAAGAAAAATATCTTCTTGATTTGGTGGGTGGTGTTCTGTTGGAAAAAACTAACTTGCCACTTTCTTTTCTTGAATTATTTTCCTATTATGGTGAATACATTTTCTTCTCAATATTATCCAAAATAACTACATTACGTTATTGTGACTTGGTGGGGTTTTGGTTTATTAGGGGTTGGAGTTTAGTTAAAGTAGAAGAAAGGGGAAAAAGTGACAACTGTTGGCTTTTATGGAGCTTTGAAGTTATTGTACTTCTCCGATCGGCTATTGCTACTCTGCTGCTCTGTTATACTCAGCAGCTCTGTAATTGGAAAGAGATTTATAATCACAACTCACAATA : GTACTAGATGGCGACACTTGGAGATATAGGCCTTGCAGCAGCAATAAATATTATATCTGCCTTGATCTTTCTTGTGGCATTTGCAATTTTGCGGCTCCAACCATTCAATGACAGAGTTTATTTCCCCAAATGGTATCTTAAGGGGCTGAGACACAGTCCCACCCACTCTGGGGCATTCGTCGCCAAATTTGTTAATGTTGATTGGAGAGCATATATAAGGTTTCTGAACTGGATACCAGATGCTCTGAAAATGCCTGAACCTGAGCTTATTGACCATGCAGGGTTGGACTCTGCTGTTTATTTGCGCATATACTTGCTAGG : GTTTTGGACTCATATTGTTATGGCTTATGCCTTCTCATTCTGGACCTGCTATGTCTTAAAAACTGAGTATGCAAAAGTTGCAGCCATGAGGTTGCAGTTTGTCGCCTCTGAAAAACGTCGTCCCGACCAATATACA : GTCCTTGTTAGGAATGTTCCGCCAGATGCTGATGAATCAGTTAGTGAATGTGTGGAGCACTTTTTCCTGGTTAACCATCAAGATCATTATCTCATGCATCAG : GGTGTTTATAATGCCAACAAACTGGCAAAATTGGTGAAGGAGAAGAAGAGTAAGCAAAATTGGCTCGACTATTACCAACTTAAGTACTCTAGGGATCAATCAAAACGGCCTATGATGAAG : ACTGGTTTCCTTGGATGCTTTGGAGCAAAAGTCGACGCAATTGAGCATCAGATTGCTGAAATTGAAAGATTGACAAAAGAG : ATAGCTGAAGAGAAACAAAGGGTAGAAAAAGACCCAAAGTCTACCATGCCTGCATCATTTGTCTCCTTCAAATCGCGGTGGGGTGCTGCTGTTTGTGCACAAACACAGCAATCCAGAAATCCAACCTTGTGGTTGACAGAATGGGCTCCAGAGCCACGTGATGTATTTTGGGATAACCTGGCAATCCCCTATGTTTCTTTGACAATTAGGAAGCTCATCATTGCTGTTGCCTTCTTTTTTCTGACATTCTTCTTCATGATCCCGATTGCATTTGTCCAAACCCTTGCCAGCCTTGAGGGGATTAGGAAGAAAGCACCATTTCTGAAAGTTATTATTGACGA : ACCTTTCATCAAGGCGTTCATCCAAGGTTTTCTACCTGGGATTGCTTTGAAGATCTTTCTCATATTTCTGCCAACTATATTGATGATGATGTCCAAATTCGAGGGCTGGCTAAGCATATCAGCTCTAGAGAGGAAATCTGCGTCTAAATACTACATCTTCACTATCGTGAATGTGTTCCTCGGGAACATAATTGCAGGAGCTGCATTTGAACAACTAAGTACCTTTCTCAATCAGTCGGCAAACCA : AATCCCTAAAACGATTGGTGTCGCAGTTCCTATGAAAGCATCCTTCTTCATAACCTACATAATGGTTGACGGCTGGGCTGGTATTGCTGGAGAGATCCTAAGGCTGAAGCCGCTAATATTTTACCACTTGAAGAACTTTTTCTTGGTTAAGACGGAAAAAGATAGAGAAGAGGCAATGGATCCTGGAAGCGTTGGTTTCAACACAGGAGAACCACAGATACAATTATATTTCTTATTGGGGCTTGTCTATGCTGTGGTCACACCATTTCTGCTTCCGTTCATATTGGTCTTCTTTGGCCTTGCATATGTAGTATATCGTCATCAG : ATTATAAATGTTTACAATCAGGAGTACGAAAGTGCAGCAGCATTCTGGCCAGATGTTCATGGACGTATAATTTTCGCACTGTGCTTTTCTCAGTTATCTTTACTAGGCTTGCTAAGTACAAAACATGCTACTCAGTCAGCACCTTTCCTGATTGCCCTTCCAGTGCTGACCATCTCATTTCACTTGTACTGCAAAGGTCGTTATGAGCCAGCTTTCACCAAATATCCGATACAG : GAAGCAAGGATGAGAGATACTCTGGAACAAGCAAGGGAACCAAATCTTAATCTGAAGGGCTACCTTCAAAATGCTTATGTGCATCCTGTTTTCAAAGACGACGATGAAGATGAGGATGAAGACTTTATGATGAAACTGGAGAACGATAGCGTTCTTGTCCCCACAAAACGCCAGTCAAGAATGAATACACCAGTTCCCAGCAAAGTCAGCGCTGGCTCATCTCCATCACTTCCTGATGCAGTTACTCATGAACATTAAACAGCTTAGAATGATAGGTTGGAATATTTCACCTCCTTTGTGCATGAGAGTTAGATCGCGGAGACTCAACCTTAACTAAGTTGTACAGAGAGCACTTCAACACATCATAGTTGAGCTGGCTGGACCAGTTTACATTGGGACGGTTGGCGTTGAAAGTACAAAAAATTGTAAAGAGCTCCGGTGGTAGCATTAGAAGTTTTGTACACTTAAGGATGTTCATATTTTTAGCATTTGCTGGTTGTTGACACTCAGGATATAATCTTGTACACGAGCTTTCTAAGGGAATGTATTTATTTTTATCG</gDNA_template>
            <first_frame> N  S  N  Y  K  K  K  K  K  K  L  I  P  L  F  N  R  S  S  V  Y  F  I  L  F  I  A  L  D  N  *  R  R  E  I  D  S  F  V  K  T  K  Q  K  K  K  T  L  P  S  F  L  L  T  V  S  V  L  K  N  T  F  A  F  I  F  N  P  I  P  T  Q  F  M  D  L  C  A  K  N  F  N  F  L  A  *  F  S  L  L  S  K  T  V  Q  E  K  Y  L  L  D  L  V  G  G  V  L  L  E  K  T  N  L  P  L  S  F  L  E  L  F  S  Y  Y  G  E  Y  I  F  F  S  I  L  S  K  I  T  T  L  R  Y  C  D  L  V  G  F  W  F  I  R  G  W  S  L  V  K  V  E  E  R  G  K  S  D  N  C  W  L  L  W  S  F  E  V  I  V  L  L  R  S  A  I  A  T  L  L  L  C  Y  T  Q  Q  L  C  N  W  K  E  I  Y  N  H  N  S  Q  * :   Y  *  M  A  T  L  G  D  I  G  L  A  A  A  I  N  I  I  S  A  L  I  F  L  V  A  F  A  I  L  R  L  Q  P  F  N  D  R  V  Y  F  P  K  W  Y  L  K  G  L  R  H  S  P  T  H  S  G  A  F  V  A  K  F  V  N  V  D  W  R  A  Y  I  R  F  L  N  W  I  P  D  A  L  K  M  P  E  P  E  L  I  D  H  A  G  L  D  S  A  V  Y  L  R  I  Y  L  L  G :   F  W  T  H  I  V  M  A  Y  A  F  S  F  W  T  C  Y  V  L  K  T  E  Y  A  K  V  A  A  M  R  L  Q  F  V  A  S  E  K  R  R  P  D  Q  Y  T  :  V  L  V  R  N  V  P  P  D  A  D  E  S  V  S  E  C  V  E  H  F  F  L  V  N  H  Q  D  H  Y  L  M  H  Q  :  G  V  Y  N  A  N  K  L  A  K  L  V  K  E  K  K  S  K  Q  N  W  L  D  Y  Y  Q  L  K  Y  S  R  D  Q  S  K  R  P  M  M  K  :  T  G  F  L  G  C  F  G  A  K  V  D  A  I  E  H  Q  I  A  E  I  E  R  L  T  K  E  :  I  A  E  E  K  Q  R  V  E  K  D  P  K  S  T  M  P  A  S  F  V  S  F  K  S  R  W  G  A  A  V  C  A  Q  T  Q  Q  S  R  N  P  T  L  W  L  T  E  W  A  P  E  P  R  D  V  F  W  D  N  L  A  I  P  Y  V  S  L  T  I  R  K  L  I  I  A  V  A  F  F  F  L  T  F  F  F  M  I  P  I  A  F  V  Q  T  L  A  S  L  E  G  I  R  K  K  A  P  F  L  K  V  I  I  D  E :   P  F  I  K  A  F  I  Q  G  F  L  P  G  I  A  L  K  I  F  L  I  F  L  P  T  I  L  M  M  M  S  K  F  E  G  W  L  S  I  S  A  L  E  R  K  S  A  S  K  Y  Y  I  F  T  I  V  N  V  F  L  G  N  I  I  A  G  A  A  F  E  Q  L  S  T  F  L  N  Q  S  A  N  Q :   I  P  K  T  I  G  V  A  V  P  M  K  A  S  F  F  I  T  Y  I  M  V  D  G  W  A  G  I  A  G  E  I  L  R  L  K  P  L  I  F  Y  H  L  K  N  F  F  L  V  K  T  E  K  D  R  E  E  A  M  D  P  G  S  V  G  F  N  T  G  E  P  Q  I  Q  L  Y  F  L  L  G  L  V  Y  A  V  V  T  P  F  L  L  P  F  I  L  V  F  F  G  L  A  Y  V  V  Y  R  H  Q  :  I  I  N  V  Y  N  Q  E  Y  E  S  A  A  A  F  W  P  D  V  H  G  R  I  I  F  A  L  C  F  S  Q  L  S  L  L  G  L  L  S  T  K  H  A  T  Q  S  A  P  F  L  I  A  L  P  V  L  T  I  S  F  H  L  Y  C  K  G  R  Y  E  P  A  F  T  K  Y  P  I  Q  :  E  A  R  M  R  D  T  L  E  Q  A  R  E  P  N  L  N  L  K  G  Y  L  Q  N  A  Y  V  H  P  V  F  K  D  D  D  E  D  E  D  E  D  F  M  M  K  L  E  N  D  S  V  L  V  P  T  K  R  Q  S  R  M  N  T  P  V  P  S  K  V  S  A  G  S  S  P  S  L  P  D  A  V  T  H  E  H  *  T  A  *  N  D  R  L  E  Y  F  T  S  F  V  H  E  S  *  I  A  E  T  Q  P  *  L  S  C  T  E  S  T  S  T  H  H  S  *  A  G  W  T  S  L  H  W  D  G  W  R  *  K  Y  K  K  L  *  R  A  P  V  V  A  L  E  V  L  Y  T  *  G  C  S  Y  F  *  H  L  L  V  V  D  T  Q  D  I  I  L  Y  T  S  F  L  R  E  C  I  Y  F  Y   </first_frame>
            <second_frame>  T  L  I  I  K  K  K  R  K  N  *  F  H  Y  L  I  G  V  V  F  I  L  F  Y  L  L  L  *  T  I  E  E  E  R  S  I  R  L  S  K  Q  N  K  K  K  K  R  Y  H  H  F  S  *  Q  Y  L  C  *  K  T  P  L  L  S  S  S  I  L  S  Q  H  S  S  W  T  C  V  Q  K  T  S  I  F  L  H  S  F  H  Y  Y  P  K  Q  C  K  K  N  I  F  L  I  W  W  V  V  F  C  W  K  K  L  T  C  H  F  L  F  L  N  Y  F  P  I  M  V  N  T  F  S  S  Q  Y  Y  P  K  *  L  H  Y  V  I  V  T  W  W  G  F  G  L  L  G  V  G  V  *  L  K  *  K  K  G  E  K  V  T  T  V  G  F  Y  G  A  L  K  L  L  Y  F  S  D  R  L  L  L  L  C  C  S  V  I  L  S  S  S  V  I  G  K  R  F  I  I  T  T  H  N   : S  T  R  W  R  H  L  E  I  *  A  L  Q  Q  Q  *  I  L  Y  L  P  *  S  F  L  W  H  L  Q  F  C  G  S  N  H  S  M  T  E  F  I  S  P  N  G  I  L  R  G  *  D  T  V  P  P  T  L  G  H  S  S  P  N  L  L  M  L  I  G  E  H  I  *  G  F  *  T  G  Y  Q  M  L  *  K  C  L  N  L  S  L  L  T  M  Q  G  W  T  L  L  F  I  C  A  Y  T  C  *   : G  F  G  L  I  L  L  W  L  M  P  S  H  S  G  P  A  M  S  *  K  L  S  M  Q  K  L  Q  P  *  G  C  S  L  S  P  L  K  N  V  V  P  T  N  I  Q :   S  L  L  G  M  F  R  Q  M  L  M  N  Q  L  V  N  V  W  S  T  F  S  W  L  T  I  K  I  I  I  S  C  I  R :   V  F  I  M  P  T  N  W  Q  N  W  *  R  R  R  R  V  S  K  I  G  S  T  I  T  N  L  S  T  L  G  I  N  Q  N  G  L  *  *  R :   L  V  S  L  D  A  L  E  Q  K  S  T  Q  L  S  I  R  L  L  K  L  K  D  *  Q  K  R :   *  L  K  R  N  K  G  *  K  K  T  Q  S  L  P  C  L  H  H  L  S  P  S  N  R  G  G  V  L  L  F  V  H  K  H  S  N  P  E  I  Q  P  C  G  *  Q  N  G  L  Q  S  H  V  M  Y  F  G  I  T  W  Q  S  P  M  F  L  *  Q  L  G  S  S  S  L  L  L  P  S  F  F  *  H  S  S  S  *  S  R  L  H  L  S  K  P  L  P  A  L  R  G  L  G  R  K  H  H  F  *  K  L  L  L  T   : N  L  S  S  R  R  S  S  K  V  F  Y  L  G  L  L  *  R  S  F  S  Y  F  C  Q  L  Y  *  *  *  C  P  N  S  R  A  G  *  A  Y  Q  L  *  R  G  N  L  R  L  N  T  T  S  S  L  S  *  M  C  S  S  G  T  *  L  Q  E  L  H  L  N  N  *  V  P  F  S  I  S  R  Q  T   : K  S  L  K  R  L  V  S  Q  F  L  *  K  H  P  S  S  *  P  T  *  W  L  T  A  G  L  V  L  L  E  R  S  *  G  *  S  R  *  Y  F  T  T  *  R  T  F  S  W  L  R  R  K  K  I  E  K  R  Q  W  I  L  E  A  L  V  S  T  Q  E  N  H  R  Y  N  Y  I  S  Y  W  G  L  S  M  L  W  S  H  H  F  C  F  R  S  Y  W  S  S  L  A  L  H  M  *  Y  I  V  I  R :   L  *  M  F  T  I  R  S  T  K  V  Q  Q  H  S  G  Q  M  F  M  D  V  *  F  S  H  C  A  F  L  S  Y  L  Y  *  A  C  *  V  Q  N  M  L  L  S  Q  H  L  S  *  L  P  F  Q  C  *  P  S  H  F  T  C  T  A  K  V  V  M  S  Q  L  S  P  N  I  R  Y  R :   K  Q  G  *  E  I  L  W  N  K  Q  G  N  Q  I  L  I  *  R  A  T  F  K  M  L  M  C  I  L  F  S  K  T  T  M  K  M  R  M  K  T  L  *  *  N  W  R  T  I  A  F  L  S  P  Q  N  A  S  Q  E  *  I  H  Q  F  P  A  K  S  A  L  A  H  L  H  H  F  L  M  Q  L  L  M  N  I  K  Q  L  R  M  I  G  W  N  I  S  P  P  L  C  M  R  V  R  S  R  R  L  N  L  N  *  V  V  Q  R  A  L  Q  H  I  I  V  E  L  A  G  P  V  Y  I  G  T  V  G  V  E  S  T  K  N  C  K  E  L  R  W  *  H  *  K  F  C  T  L  K  D  V  H  I  F  S  I  C  W  L  L  T  L  R  I  *  S  C  T  R  A  F  *  G  N  V  F  I  F  I  </second_frame>
            <third_frame>   L  *  L  *  K  K  K  E  K  I  N  S  I  I  *  *  E  *  C  L  F  Y  F  I  Y  C  S  R  Q  L  K  K  R  D  R  F  V  C  Q  N  K  T  K  K  K  N  V  T  I  I  S  P  N  S  I  C  A  E  K  H  L  C  F  H  L  Q  S  Y  P  N  T  V  H  G  L  V  C  K  K  L  Q  F  S  C  I  V  F  I  I  I  Q  N  S  A  R  K  I  S  S  *  F  G  G  W  C  S  V  G  K  N  *  L  A  T  F  F  S  *  I  I  F  L  L  W  *  I  H  F  L  L  N  I  I  Q  N  N  Y  I  T  L  L  *  L  G  G  V  L  V  Y  *  G  L  E  F  S  *  S  R  R  K  G  K  K  *  Q  L  L  A  F  M  E  L  *  S  Y  C  T  S  P  I  G  Y  C  Y  S  A  A  L  L  Y  S  A  A  L  *  L  E  R  D  L  *  S  Q  L  T  I  :  V  L  D  G  D  T  W  R  Y  R  P  C  S  S  N  K  Y  Y  I  C  L  D  L  S  C  G  I  C  N  F  A  A  P  T  I  Q  *  Q  S  L  F  P  Q  M  V  S  *  G  A  E  T  Q  S  H  P  L  W  G  I  R  R  Q  I  C  *  C  *  L  E  S  I  Y  K  V  S  E  L  D  T  R  C  S  E  N  A  *  T  *  A  Y  *  P  C  R  V  G  L  C  C  L  F  A  H  I  L  A  R  :  V  L  D  S  Y  C  Y  G  L  C  L  L  I  L  D  L  L  C  L  K  N  *  V  C  K  S  C  S  H  E  V  A  V  C  R  L  *  K  T  S  S  R  P  I  Y   : S  P  C  *  E  C  S  A  R  C  *  *  I  S  *  *  M  C  G  A  L  F  P  G  *  P  S  R  S  L  S  H  A  S   : G  C  L  *  C  Q  Q  T  G  K  I  G  E  G  E  E  E  *  A  K  L  A  R  L  L  P  T  *  V  L  *  G  S  I  K  T  A  Y  D  E   : D  W  F  P  W  M  L  W  S  K  S  R  R  N  *  A  S  D  C  *  N  *  K  I  D  K  R   : D  S  *  R  E  T  K  G  R  K  R  P  K  V  Y  H  A  C  I  I  C  L  L  Q  I  A  V  G  C  C  C  L  C  T  N  T  A  I  Q  K  S  N  L  V  V  D  R  M  G  S  R  A  T  *  C  I  L  G  *  P  G  N  P  L  C  F  F  D  N  *  E  A  H  H  C  C  C  L  L  F  S  D  I  L  L  H  D  P  D  C  I  C  P  N  P  C  Q  P  *  G  D  *  E  E  S  T  I  S  E  S  Y  Y  *  R  :  T  F  H  Q  G  V  H  P  R  F  S  T  W  D  C  F  E  D  L  S  H  I  S  A  N  Y  I  D  D  D  V  Q  I  R  G  L  A  K  H  I  S  S  R  E  E  I  C  V  *  I  L  H  L  H  Y  R  E  C  V  P  R  E  H  N  C  R  S  C  I  *  T  T  K  Y  L  S  Q  S  V  G  K  P  :  N  P  *  N  D  W  C  R  S  S  Y  E  S  I  L  L  H  N  L  H  N  G  *  R  L  G  W  Y  C  W  R  D  P  K  A  E  A  A  N  I  L  P  L  E  E  L  F  L  G  *  D  G  K  R  *  R  R  G  N  G  S  W  K  R  W  F  Q  H  R  R  T  T  D  T  I  I  F  L  I  G  A  C  L  C  C  G  H  T  I  S  A  S  V  H  I  G  L  L  W  P  C  I  C  S  I  S  S  S   : D  Y  K  C  L  Q  S  G  V  R  K  C  S  S  I  L  A  R  C  S  W  T  Y  N  F  R  T  V  L  F  S  V  I  F  T  R  L  A  K  Y  K  T  C  Y  S  V  S  T  F  P  D  C  P  S  S  A  D  H  L  I  S  L  V  L  Q  R  S  L  *  A  S  F  H  Q  I  S  D  T   : G  S  K  D  E  R  Y  S  G  T  S  K  G  T  K  S  *  S  E  G  L  P  S  K  C  L  C  A  S  C  F  Q  R  R  R  *  R  *  G  *  R  L  Y  D  E  T  G  E  R  *  R  S  C  P  H  K  T  P  V  K  N  E  Y  T  S  S  Q  Q  S  Q  R  W  L  I  S  I  T  S  *  C  S  Y  S  *  T  L  N  S  L  E  *  *  V  G  I  F  H  L  L  C  A  *  E  L  D  R  G  D  S  T  L  T  K  L  Y  R  E  H  F  N  T  S  *  L  S  W  L  D  Q  F  T  L  G  R  L  A  L  K  V  Q  K  I  V  K  S  S  G  G  S  I  R  S  F  V  H  L  R  M  F  I  F  L  A  F  A  G  C  *  H  S  G  Y  N  L  V  H  E  L  S  K  G  M  Y  L  F  L  S </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0320D04.2" strand="-"/>
                <serials PGL_serial="12" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="92668" stop="92355"/>
                    <exon start="90800" stop="90665"/>
                    <exon start="89371" stop="89270"/>
                    <exon start="87751" stop="87632"/>
                    <exon start="87479" stop="87399"/>
                    <exon start="86564" stop="86224"/>
                    <exon start="85314" stop="85069"/>
                    <exon start="83954" stop="83630"/>
                    <exon start="82646" stop="82413"/>
                    <exon start="82281" stop="82024"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>2154</number_coding_nucleotides>
                  <number_encoded_amino_acids>718</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>MATLGDIGLAAAINIISALIFLVAFAILRLQPFNDRVYFPKWYLKGLRHSPTHSGAFVAKFVNVDWRAYIRFLNWIPDALKMPEPELIDHAGLDSAVYLRIYLLGFWTHIVMAYAFSFWTCYVLKTEYAKVAAMRLQFVASEKRRPDQYTVLVRNVPPDADESVSECVEHFFLVNHQDHYLMHQGVYNANKLAKLVKEKKSKQNWLDYYQLKYSRDQSKRPMMKTGFLGCFGAKVDAIEHQIAEIERLTKEIAEEKQRVEKDPKSTMPASFVSFKSRWGAAVCAQTQQSRNPTLWLTEWAPEPRDVFWDNLAIPYVSLTIRKLIIAVAFFFLTFFFMIPIAFVQTLASLEGIRKKAPFLKVIIDEPFIKAFIQGFLPGIALKIFLIFLPTILMMMSKFEGWLSISALERKSASKYYIFTIVNVFLGNIIAGAAFEQLSTFLNQSANQIPKTIGVAVPMKASFFITYIMVDGWAGIAGEILRLKPLIFYHLKNFFLVKTEKDREEAMDPGSVGFNTGEPQIQLYFLLGLVYAVVTPFLLPFILVFFGLAYVVYRHQIINVYNQEYESAAAFWPDVHGRIIFALCFSQLSLLGLLSTKHATQSAPFLIALPVLTISFHLYCKGRYEPAFTKYPIQEARMRDTLEQAREPNLNLKGYLQNAYVHPVFKDDDEDEDEDFMMKLENDSVLVPTKRQSRMNTPVPSKVSAGSSPSLPDAVTHEH*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0320D04.2" strand="-"/>
                <serials PGL_serial="12" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="93855" stop="92675"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>360</number_coding_nucleotides>
                  <number_encoded_amino_acids>120</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FSLLSKTVQEKYLLDLVGGVLLEKTNLPLSFLELFSYYGEYIFFSILSKITTLRYCDLVGFWFIRGWSLVKVEERGKSDNCWLLWSFEVIVLLRSAIATLLLCYTQQLCNWKEIYNHNSQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="94018" e_stop="93456"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.995"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.995">
            <gDNA_exon_boundary e_start="94018" e_stop="93456" e_length="563"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94018" stop="93456"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E268829" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="93963" stop="93498"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E341650" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAGAGAGATCGATTCGTTTGTCAAAACAAAACAAAAAAAAAAAACGTTACCATCATTTCTCCTAACAGTATCTGTGCTGAAAAACACCTTTGCTTTCATCTTCAATCCTATCCCAACACAGTTCATGGACTTGTGTGCAAAAAACTTCAATTTTCTTGCATAGTTTTCATTATTATCCAAAACAGTGCAAGAAAAATATCTTCTTGATTTGGTGGGTGGTGTTCTGTTGGAAAAAACTAACTTGCCACTTTCTTTTCTTGAATTATTTTCCTATTATGGTGAATACATTTTCTTCTCAATATTATCCAAAATAACTACATTACGTTATTGTGACTTGGTGGGGTTTTGGTTTATTAGGGGTTGGAGTTTAGTTAAAGTAGAAGAAAGGGGAAAAAGTGACAACTGTTGGCTTTTATGGAGCTTTGAAGTTATTGTACTTCTCCGATCGGCTATTGCTACTCTGCTGCTCTGTTATACTCAGCAGCTCTGTAATTGGAAAGAGATTTATAATCACAACTCACAATAGTATGATCTTCTTTCTGCAACTGTTTTTTTTTTTAAAA</gDNA_template>
            <first_frame> K  R  D  R  F  V  C  Q  N  K  T  K  K  K  N  V  T  I  I  S  P  N  S  I  C  A  E  K  H  L  C  F  H  L  Q  S  Y  P  N  T  V  H  G  L  V  C  K  K  L  Q  F  S  C  I  V  F  I  I  I  Q  N  S  A  R  K  I  S  S  *  F  G  G  W  C  S  V  G  K  N  *  L  A  T  F  F  S  *  I  I  F  L  L  W  *  I  H  F  L  L  N  I  I  Q  N  N  Y  I  T  L  L  *  L  G  G  V  L  V  Y  *  G  L  E  F  S  *  S  R  R  K  G  K  K  *  Q  L  L  A  F  M  E  L  *  S  Y  C  T  S  P  I  G  Y  C  Y  S  A  A  L  L  Y  S  A  A  L  *  L  E  R  D  L  *  S  Q  L  T  I  V  *  S  S  F  C  N  C  F  F  F  *   </first_frame>
            <second_frame>  R  E  I  D  S  F  V  K  T  K  Q  K  K  K  T  L  P  S  F  L  L  T  V  S  V  L  K  N  T  F  A  F  I  F  N  P  I  P  T  Q  F  M  D  L  C  A  K  N  F  N  F  L  A  *  F  S  L  L  S  K  T  V  Q  E  K  Y  L  L  D  L  V  G  G  V  L  L  E  K  T  N  L  P  L  S  F  L  E  L  F  S  Y  Y  G  E  Y  I  F  F  S  I  L  S  K  I  T  T  L  R  Y  C  D  L  V  G  F  W  F  I  R  G  W  S  L  V  K  V  E  E  R  G  K  S  D  N  C  W  L  L  W  S  F  E  V  I  V  L  L  R  S  A  I  A  T  L  L  L  C  Y  T  Q  Q  L  C  N  W  K  E  I  Y  N  H  N  S  Q  *  Y  D  L  L  S  A  T  V  F  F  F  K  </second_frame>
            <third_frame>   E  R  S  I  R  L  S  K  Q  N  K  K  K  K  R  Y  H  H  F  S  *  Q  Y  L  C  *  K  T  P  L  L  S  S  S  I  L  S  Q  H  S  S  W  T  C  V  Q  K  T  S  I  F  L  H  S  F  H  Y  Y  P  K  Q  C  K  K  N  I  F  L  I  W  W  V  V  F  C  W  K  K  L  T  C  H  F  L  F  L  N  Y  F  P  I  M  V  N  T  F  S  S  Q  Y  Y  P  K  *  L  H  Y  V  I  V  T  W  W  G  F  G  L  L  G  V  G  V  *  L  K  *  K  K  G  E  K  V  T  T  V  G  F  Y  G  A  L  K  L  L  Y  F  S  D  R  L  L  L  L  C  C  S  V  I  L  S  S  S  V  I  G  K  R  F  I  I  T  T  H  N  S  M  I  F  F  L  Q  L  F  F  F  L  K </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0320D04.2" strand="-"/>
                <serials PGL_serial="12" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="93855" stop="93493"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>360</number_coding_nucleotides>
                  <number_encoded_amino_acids>120</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FSLLSKTVQEKYLLDLVGGVLLEKTNLPLSFLELFSYYGEYIFFSILSKITTLRYCDLVGFWFIRGWSLVKVEERGKSDNCWLLWSFEVIVLLRSAIATLLLCYTQQLCNWKEIYNHNSQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="-" PGL_start="104057" PGL_stop="102299"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="104057" e_stop="103998"/>
            <exon e_start="103788" e_stop="103589"/>
            <exon e_start="103399" e_stop="103310"/>
            <exon e_start="102987" e_stop="102894"/>
            <exon e_start="102802" e_stop="102645"/>
            <exon e_start="102561" e_stop="102470"/>
            <exon e_start="102378" e_stop="102299"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.830" acc_prob="0.999" e_score="0.966"/>
          <exon-intron don_prob="0.889" acc_prob="0.926" e_score="0.945"/>
          <exon-intron don_prob="0.998" acc_prob="0.997" e_score="0.978"/>
          <exon-intron don_prob="0.892" acc_prob="0.944" e_score="0.947"/>
          <exon-intron don_prob="0.984" acc_prob="0.999" e_score="0.975"/>
          <exon-intron don_prob="0.999" acc_prob="0.988" e_score="0.989"/>
          <exon-only e_score="0.925"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.966">
            <gDNA_exon_boundary e_start="104057" e_stop="103998" e_length="60"/>
          </exon>
          <intron i_serial="1" don_prob="0.830" acc_prob="0.999">
            <gDNA_intron_boundary i_start="103997" i_stop="103789" i_length="209"/>
          </intron>
          <exon e_serial="2" e_score="0.945">
            <gDNA_exon_boundary e_start="103788" e_stop="103589" e_length="200"/>
          </exon>
          <intron i_serial="2" don_prob="0.889" acc_prob="0.926">
            <gDNA_intron_boundary i_start="103588" i_stop="103400" i_length="189"/>
          </intron>
          <exon e_serial="3" e_score="0.978">
            <gDNA_exon_boundary e_start="103399" e_stop="103310" e_length="90"/>
          </exon>
          <intron i_serial="3" don_prob="0.998" acc_prob="0.997">
            <gDNA_intron_boundary i_start="103309" i_stop="102988" i_length="322"/>
          </intron>
          <exon e_serial="4" e_score="0.947">
            <gDNA_exon_boundary e_start="102987" e_stop="102894" e_length="94"/>
          </exon>
          <intron i_serial="4" don_prob="0.892" acc_prob="0.944">
            <gDNA_intron_boundary i_start="102893" i_stop="102803" i_length="91"/>
          </intron>
          <exon e_serial="5" e_score="0.975">
            <gDNA_exon_boundary e_start="102802" e_stop="102645" e_length="158"/>
          </exon>
          <intron i_serial="5" don_prob="0.984" acc_prob="0.999">
            <gDNA_intron_boundary i_start="102644" i_stop="102562" i_length="83"/>
          </intron>
          <exon e_serial="6" e_score="0.989">
            <gDNA_exon_boundary e_start="102561" e_stop="102470" e_length="92"/>
          </exon>
          <intron i_serial="6" don_prob="0.999" acc_prob="0.988">
            <gDNA_intron_boundary i_start="102469" i_stop="102379" i_length="91"/>
          </intron>
          <exon e_serial="7" e_score="0.925">
            <gDNA_exon_boundary e_start="102378" e_stop="102299" e_length="80"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104057" stop="103998"/>
              <exon start="103788" stop="103589"/>
              <exon start="103399" stop="103310"/>
              <exon start="102987" stop="102894"/>
              <exon start="102802" stop="102645"/>
              <exon start="102561" stop="102470"/>
              <exon start="102378" stop="102299"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E433609" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104055" stop="103998"/>
              <exon start="103788" stop="103589"/>
              <exon start="103399" stop="103310"/>
              <exon start="102987" stop="102894"/>
              <exon start="102802" stop="102645"/>
              <exon start="102561" stop="102526"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E403764" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAACGGAGGAAAATCTTAACTTGGAACCTTACAAACACAGTAGTAATAAGCATATTCCTG : GTCATGCAAATTTTGAGAATTCATCAGAAGGGGGATCTCTTAAACAGGGCGCTTCCCCAGAGGTCCCGAGGATTGCTGTGGATAAATCTATAGAATTTTCATATGATGAACTTGCTAAAGCCAGTGACAATTTCAGCACAGCCTACAAGATTGGCCAAGGTGGTTTCGCATCTGTTTACTATGGAGAGTTAAGAGGCGAG : AAAGCTGCTATCAAGAAGATGGATATGCAAGCAACAAAAGAATTCCTTGCTGAATTGAAGGTTTTGACTCATGTTCATCACTTGAACTTG : GTACGTTTGATAGGATACTGCGTTGAAGGATCCTTGTTCTTAGTATACGAATACATTGAAAATGGAAACCTAAGCCAACATTTGCGCGGTTTTG : TTCCAGGTAAGGTGCCATTGCCATGGTCTACCAGGGTGAAAATTGCTCTGGATGCAGCTAGAGGCCTAGAGTACATCCACGAACACACTGTTCCTGTTTACATCCATCGCGACATTAAAACAGCCAACATTTTGATCGATAAAAACTTTCGTGCAAAG : GTTGCTGACTTTGGACTCACAAAACTGATAGAAACTGAAGGTGGTTCGATGAACACTCGTCTTGTTGGTACTTTTGGTTACATGGCCCCAGA : GTATGGTCAATTTGGTAATGTTTCACTCAAAATAGATGTATATGCATTTGGGGTTGTGCTTTATGAATTAATATCTGCTA</gDNA_template>
            <first_frame> K  R  R  K  I  L  T  W  N  L  T  N  T  V  V  I  S  I  F  L  :  V  M  Q  I  L  R  I  H  Q  K  G  D  L  L  N  R  A  L  P  Q  R  S  R  G  L  L  W  I  N  L  *  N  F  H  M  M  N  L  L  K  P  V  T  I  S  A  Q  P  T  R  L  A  K  V  V  S  H  L  F  T  M  E  S  *  E  A  R :   K  L  L  S  R  R  W  I  C  K  Q  Q  K  N  S  L  L  N  *  R  F  *  L  M  F  I  T  *  T  W :   Y  V  *  *  D  T  A  L  K  D  P  C  S  *  Y  T  N  T  L  K  M  E  T  *  A  N  I  C  A  V  L  :  F  Q  V  R  C  H  C  H  G  L  P  G  *  K  L  L  W  M  Q  L  E  A  *  S  T  S  T  N  T  L  F  L  F  T  S  I  A  T  L  K  Q  P  T  F  *  S  I  K  T  F  V  Q  R :   L  L  T  L  D  S  Q  N  *  *  K  L  K  V  V  R  *  T  L  V  L  L  V  L  L  V  T  W  P  Q   : S  M  V  N  L  V  M  F  H  S  K  *  M  Y  M  H  L  G  L  C  F  M  N  *  Y  L  L </first_frame>
            <second_frame>  N  G  G  K  S  *  L  G  T  L  Q  T  Q  *  *  *  A  Y  S  W :   S  C  K  F  *  E  F  I  R  R  G  I  S  *  T  G  R  F  P  R  G  P  E  D  C  C  G  *  I  Y  R  I  F  I  *  *  T  C  *  S  Q  *  Q  F  Q  H  S  L  Q  D  W  P  R  W  F  R  I  C  L  L  W  R  V  K  R  R   : E  S  C  Y  Q  E  D  G  Y  A  S  N  K  R  I  P  C  *  I  E  G  F  D  S  C  S  S  L  E  L   : G  T  F  D  R  I  L  R  *  R  I  L  V  L  S  I  R  I  H  *  K  W  K  P  K  P  T  F  A  R  F  C :   S  R  *  G  A  I  A  M  V  Y  Q  G  E  N  C  S  G  C  S  *  R  P  R  V  H  P  R  T  H  C  S  C  L  H  P  S  R  H  *  N  S  Q  H  F  D  R  *  K  L  S  C  K   : G  C  *  L  W  T  H  K  T  D  R  N  *  R  W  F  D  E  H  S  S  C  W  Y  F  W  L  H  G  P  R  :  V  W  S  I  W  *  C  F  T  Q  N  R  C  I  C  I  W  G  C  A  L  *  I  N  I  C   </second_frame>
            <third_frame>   T  E  E  N  L  N  L  E  P  Y  K  H  S  S  N  K  H  I  P   : G  H  A  N  F  E  N  S  S  E  G  G  S  L  K  Q  G  A  S  P  E  V  P  R  I  A  V  D  K  S  I  E  F  S  Y  D  E  L  A  K  A  S  D  N  F  S  T  A  Y  K  I  G  Q  G  G  F  A  S  V  Y  Y  G  E  L  R  G  E  :  K  A  A  I  K  K  M  D  M  Q  A  T  K  E  F  L  A  E  L  K  V  L  T  H  V  H  H  L  N  L  :  V  R  L  I  G  Y  C  V  E  G  S  L  F  L  V  Y  E  Y  I  E  N  G  N  L  S  Q  H  L  R  G  F   : V  P  G  K  V  P  L  P  W  S  T  R  V  K  I  A  L  D  A  A  R  G  L  E  Y  I  H  E  H  T  V  P  V  Y  I  H  R  D  I  K  T  A  N  I  L  I  D  K  N  F  R  A  K  :  V  A  D  F  G  L  T  K  L  I  E  T  E  G  G  S  M  N  T  R  L  V  G  T  F  G  Y  M  A  P  E :   Y  G  Q  F  G  N  V  S  L  K  I  D  V  Y  A  F  G  V  V  L  Y  E  L  I  S  A  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0320D04.2" strand="-"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="104055" stop="103998"/>
                    <exon start="103788" stop="103589"/>
                    <exon start="103399" stop="103310"/>
                    <exon start="102987" stop="102894"/>
                    <exon start="102802" stop="102645"/>
                    <exon start="102561" stop="102470"/>
                    <exon start="102378" stop="102300"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>771</number_coding_nucleotides>
                  <number_encoded_amino_acids>257</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TEENLNLEPYKHSSNKHIPGHANFENSSEGGSLKQGASPEVPRIAVDKSIEFSYDELAKASDNFSTAYKIGQGGFASVYYGELRGEKAAIKKMDMQATKEFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSQHLRGFVPGKVPLPWSTRVKIALDAARGLEYIHEHTVPVYIHRDIKTANILIDKNFRAKVADFGLTKLIETEGGSMNTRLVGTFGYMAPEYGQFGNVSLKIDVYAFGVVLYELISA</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="-" PGL_start="105456" PGL_stop="104914"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="105456" e_stop="104914"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="105456" e_stop="104914" e_length="543"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="105456" stop="104914"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E337921" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTGTCAAGTGTCAACTAACACAACCATATTTTCATCCATTGGCATCTTTCATTCAAGATTCTAAAAAGAGTTCAAAAAATCTCAACCCATTTTTCAACTAGTACATAGTTGAAAATCAGATGATTTTTTTTCAAGAAAATAGAAGCTTTGAGTTGGTTTTAGGCCTTTTAGTGTTAAACATTTTGTGGGTGGGGGTTAAATCCCAGTGTAGTGATGATTGTGATGCATTAGCTTCATTTTATGTATGGAATGGTGCTAACCTCACTTTTATGTCTAATACTTTTTCAACCCCCATCAAGAATATCCTTAGTTATAATCCTCAGATAACCAATCCAGATATTATTCAATCCCAAAGCAGAGTTAATGTTCCCTTCTCATGTAGCTGTGTTGATGGGAAATTCATGGGACATCAGTTTGATGTGCAGGTCAAGACTAATACTACTTATCCGAGAATCACTCGTCTTTATTGTTCGAACCTTACAACAGTTGAAAAGTTGCAGGAGTCTAACAGTTATGATCCTAACAATGTTCCTGTGAATTCAA</gDNA_template>
            <first_frame> L  S  S  V  N  *  H  N  H  I  F  I  H  W  H  L  S  F  K  I  L  K  R  V  Q  K  I  S  T  H  F  S  T  S  T  *  L  K  I  R  *  F  F  F  K  K  I  E  A  L  S  W  F  *  A  F  *  C  *  T  F  C  G  W  G  L  N  P  S  V  V  M  I  V  M  H  *  L  H  F  M  Y  G  M  V  L  T  S  L  L  C  L  I  L  F  Q  P  P  S  R  I  S  L  V  I  I  L  R  *  P  I  Q  I  L  F  N  P  K  A  E  L  M  F  P  S  H  V  A  V  L  M  G  N  S  W  D  I  S  L  M  C  R  S  R  L  I  L  L  I  R  E  S  L  V  F  I  V  R  T  L  Q  Q  L  K  S  C  R  S  L  T  V  M  I  L  T  M  F  L  *  I  Q </first_frame>
            <second_frame>  C  Q  V  S  T  N  T  T  I  F  S  S  I  G  I  F  H  S  R  F  *  K  E  F  K  K  S  Q  P  I  F  Q  L  V  H  S  *  K  S  D  D  F  F  S  R  K  *  K  L  *  V  G  F  R  P  F  S  V  K  H  F  V  G  G  G  *  I  P  V  *  *  *  L  *  C  I  S  F  I  L  C  M  E  W  C  *  P  H  F  Y  V  *  Y  F  F  N  P  H  Q  E  Y  P  *  L  *  S  S  D  N  Q  S  R  Y  Y  S  I  P  K  Q  S  *  C  S  L  L  M  *  L  C  *  W  E  I  H  G  T  S  V  *  C  A  G  Q  D  *  Y  Y  L  S  E  N  H  S  S  L  L  F  E  P  Y  N  S  *  K  V  A  G  V  *  Q  L  *  S  *  Q  C  S  C  E  F   </second_frame>
            <third_frame>   V  K  C  Q  L  T  Q  P  Y  F  H  P  L  A  S  F  I  Q  D  S  K  K  S  S  K  N  L  N  P  F  F  N  *  Y  I  V  E  N  Q  M  I  F  F  Q  E  N  R  S  F  E  L  V  L  G  L  L  V  L  N  I  L  W  V  G  V  K  S  Q  C  S  D  D  C  D  A  L  A  S  F  Y  V  W  N  G  A  N  L  T  F  M  S  N  T  F  S  T  P  I  K  N  I  L  S  Y  N  P  Q  I  T  N  P  D  I  I  Q  S  Q  S  R  V  N  V  P  F  S  C  S  C  V  D  G  K  F  M  G  H  Q  F  D  V  Q  V  K  T  N  T  T  Y  P  R  I  T  R  L  Y  C  S  N  L  T  T  V  E  K  L  Q  E  S  N  S  Y  D  P  N  N  V  P  V  N  S  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0320D04.2" strand="-"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="105355" stop="104915"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>441</number_coding_nucleotides>
                  <number_encoded_amino_acids>147</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>YIVENQMIFFQENRSFELVLGLLVLNILWVGVKSQCSDDCDALASFYVWNGANLTFMSNTFSTPIKNILSYNPQITNPDIIQSQSRVNVPFSCSCVDGKFMGHQFDVQVKTNTTYPRITRLYCSNLTTVEKLQESNSYDPNNVPVNS</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="15" PGL_strand="+" PGL_start="111442" PGL_stop="111859"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="111442" e_stop="111859"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.981"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.981">
            <gDNA_exon_boundary e_start="111442" e_stop="111859" e_length="418"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="111442" stop="111859"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E380017" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CACCAAGATTTACGTGGAAAACCCTTCGATGTGAAGAGTAAAAAACCACGGGACCAAAAGCTCCACTATAATCACCAAGAGTTACAATATTGTTCTCCAAAATTGGCCACAAAACAAAGTGCCAAACAACGAGCAACAACAAAATAAGACTGCACCAAATCTAGAGAATTAAAGGAGCAAAATCACCAATTTCGCAGCTACTGTTCACGACAGCAAAACTGAAGTTGCAGACCACCAAATCCAACTCTGTCAGTTCCTAATCAAAGATTGAGATGAAGATAATATGCTGTCCAAAAATCAGCTCAATCGGACAAGAAACGAAGCGGGAATCGCAATTTGAAGTTGGTTGTTATGGCTGGATTTTTGACTGCGAATTTCTCTCTTTTTTCTCTCTTTTGGCTGCTGAAAAACTCTCTCT</gDNA_template>
            <first_frame> H  Q  D  L  R  G  K  P  F  D  V  K  S  K  K  P  R  D  Q  K  L  H  Y  N  H  Q  E  L  Q  Y  C  S  P  K  L  A  T  K  Q  S  A  K  Q  R  A  T  T  K  *  D  C  T  K  S  R  E  L  K  E  Q  N  H  Q  F  R  S  Y  C  S  R  Q  Q  N  *  S  C  R  P  P  N  P  T  L  S  V  P  N  Q  R  L  R  *  R  *  Y  A  V  Q  K  S  A  Q  S  D  K  K  R  S  G  N  R  N  L  K  L  V  V  M  A  G  F  L  T  A  N  F  S  L  F  S  L  F  W  L  L  K  N  S  L  </first_frame>
            <second_frame>  T  K  I  Y  V  E  N  P  S  M  *  R  V  K  N  H  G  T  K  S  S  T  I  I  T  K  S  Y  N  I  V  L  Q  N  W  P  Q  N  K  V  P  N  N  E  Q  Q  Q  N  K  T  A  P  N  L  E  N  *  R  S  K  I  T  N  F  A  A  T  V  H  D  S  K  T  E  V  A  D  H  Q  I  Q  L  C  Q  F  L  I  K  D  *  D  E  D  N  M  L  S  K  N  Q  L  N  R  T  R  N  E  A  G  I  A  I  *  S  W  L  L  W  L  D  F  *  L  R  I  S  L  F  F  L  S  F  G  C  *  K  T  L  S </second_frame>
            <third_frame>   P  R  F  T  W  K  T  L  R  C  E  E  *  K  T  T  G  P  K  A  P  L  *  S  P  R  V  T  I  L  F  S  K  I  G  H  K  T  K  C  Q  T  T  S  N  N  K  I  R  L  H  Q  I  *  R  I  K  G  A  K  S  P  I  S  Q  L  L  F  T  T  A  K  L  K  L  Q  T  T  K  S  N  S  V  S  S  *  S  K  I  E  M  K  I  I  C  C  P  K  I  S  S  I  G  Q  E  T  K  R  E  S  Q  F  E  V  G  C  Y  G  W  I  F  D  C  E  F  L  S  F  F  S  L  L  A  A  E  K  L  S   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0320D04.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="16" PGL_strand="+" PGL_start="117193" PGL_stop="123404"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="117193" e_stop="117328"/>
            <exon e_start="117573" e_stop="117664"/>
            <exon e_start="122584" e_stop="122701"/>
            <exon e_start="122859" e_stop="122875"/>
            <exon e_start="122954" e_stop="123016"/>
            <exon e_start="123168" e_stop="123404"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.971" acc_prob="1.000" e_score="0.948"/>
          <exon-intron don_prob="0.962" acc_prob="0.990" e_score="1.000"/>
          <exon-intron don_prob="0.993" acc_prob="0.861" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.822" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.980" e_score="1.000"/>
          <exon-only e_score="0.924"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.948">
            <gDNA_exon_boundary e_start="117193" e_stop="117328" e_length="136"/>
          </exon>
          <intron i_serial="1" don_prob="0.971" acc_prob="1.000">
            <gDNA_intron_boundary i_start="117329" i_stop="117572" i_length="244"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="117573" e_stop="117664" e_length="92"/>
          </exon>
          <intron i_serial="2" don_prob="0.962" acc_prob="0.990">
            <gDNA_intron_boundary i_start="117665" i_stop="122583" i_length="4919"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="122584" e_stop="122701" e_length="118"/>
          </exon>
          <intron i_serial="3" don_prob="0.993" acc_prob="0.861">
            <gDNA_intron_boundary i_start="122702" i_stop="122858" i_length="157"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="122859" e_stop="122875" e_length="17"/>
          </exon>
          <intron i_serial="4" don_prob="0.998" acc_prob="0.822">
            <gDNA_intron_boundary i_start="122876" i_stop="122953" i_length="78"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="122954" e_stop="123016" e_length="63"/>
          </exon>
          <intron i_serial="5" don_prob="0.999" acc_prob="0.980">
            <gDNA_intron_boundary i_start="123017" i_stop="123167" i_length="151"/>
          </intron>
          <exon e_serial="6" e_score="0.924">
            <gDNA_exon_boundary e_start="123168" e_stop="123404" e_length="237"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="117193" stop="117328"/>
              <exon start="117573" stop="117664"/>
              <exon start="122584" stop="122701"/>
              <exon start="122859" stop="122875"/>
              <exon start="122954" stop="123016"/>
              <exon start="123168" stop="123404"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E540636" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="117194" stop="117328"/>
              <exon start="117573" stop="117664"/>
              <exon start="122584" stop="122687"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E289703" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="16" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ACAGCAATTGTATCTTCACAGCTCTCCTTATTCCCTTCAACACTTCAAAGAGAAAACAGAAATCATCTATTCAAGTCATCGAAACAGAGAACTTGTCAATCTACTCGTTTCCACTGTCACAAGATGTATGTCCCTG : GATTTGGGACATCACCAGAATCCACAGCAGCCCAACACTTACACCACTTTTTCAATTTTATTGCTGTTAAAATTGTTGCTGCACAGCTTCAG : AGCTACAATCCTGAAGCATACGAGGAGCTGAGGGAGTTTCTGGATAAGAATTCATTGAGTGATGGGGATAAGTTCTGCGCGGATTTGATGAGGGAATCCCCGAGACATAAAGATCTAG : CTATGCGCATTTTAGAG : GTTCGATCAGCATACTGTAAGGACGACTTTGAGTGGGATAACTTGAAGCGCCTAGCATCAAAG : ATGGTGGATGATTCTAATAAAAAGCTAATGACGGATTATATCGTGGATACTAGCTGCATTGCAGATGGAAAGCAGATATGCAACTAATCAAACTCCTTAAAATTTTAATCCACTGTGTATTTAGGAAAACTACAGAATATACATGTTTTCACTTAATTTTGATAAATCTGTATATATGCTGTTATTCCATTTAGCTGCAAAATTCAGCCAAATATGAGCAAATATTGTGTAATCTGA</gDNA_template>
            <first_frame> T  A  I  V  S  S  Q  L  S  L  F  P  S  T  L  Q  R  E  N  R  N  H  L  F  K  S  S  K  Q  R  T  C  Q  S  T  R  F  H  C  H  K  M  Y  V  P   : G  F  G  T  S  P  E  S  T  A  A  Q  H  L  H  H  F  F  N  F  I  A  V  K  I  V  A  A  Q  L  Q  :  S  Y  N  P  E  A  Y  E  E  L  R  E  F  L  D  K  N  S  L  S  D  G  D  K  F  C  A  D  L  M  R  E  S  P  R  H  K  D  L   : A  M  R  I  L  E  :  V  R  S  A  Y  C  K  D  D  F  E  W  D  N  L  K  R  L  A  S  K  :  M  V  D  D  S  N  K  K  L  M  T  D  Y  I  V  D  T  S  C  I  A  D  G  K  Q  I  C  N  *  S  N  S  L  K  F  *  S  T  V  Y  L  G  K  L  Q  N  I  H  V  F  T  *  F  *  *  I  C  I  Y  A  V  I  P  F  S  C  K  I  Q  P  N  M  S  K  Y  C  V  I  * </first_frame>
            <second_frame>  Q  Q  L  Y  L  H  S  S  P  Y  S  L  Q  H  F  K  E  K  T  E  I  I  Y  S  S  H  R  N  R  E  L  V  N  L  L  V  S  T  V  T  R  C  M  S  L  :  D  L  G  H  H  Q  N  P  Q  Q  P  N  T  Y  T  T  F  S  I  L  L  L  L  K  L  L  L  H  S  F  R :   A  T  I  L  K  H  T  R  S  *  G  S  F  W  I  R  I  H  *  V  M  G  I  S  S  A  R  I  *  *  G  N  P  R  D  I  K  I  *  :  L  C  A  F  *  R :   F  D  Q  H  T  V  R  T  T  L  S  G  I  T  *  S  A  *  H  Q  R :   W  W  M  I  L  I  K  S  *  *  R  I  I  S  W  I  L  A  A  L  Q  M  E  S  R  Y  A  T  N  Q  T  P  *  N  F  N  P  L  C  I  *  E  N  Y  R  I  Y  M  F  S  L  N  F  D  K  S  V  Y  M  L  L  F  H  L  A  A  K  F  S  Q  I  *  A  N  I  V  *  S   </second_frame>
            <third_frame>   S  N  C  I  F  T  A  L  L  I  P  F  N  T  S  K  R  K  Q  K  S  S  I  Q  V  I  E  T  E  N  L  S  I  Y  S  F  P  L  S  Q  D  V  C  P  W :   I  W  D  I  T  R  I  H  S  S  P  T  L  T  P  L  F  Q  F  Y  C  C  *  N  C  C  C  T  A  S   : E  L  Q  S  *  S  I  R  G  A  E  G  V  S  G  *  E  F  I  E  *  W  G  *  V  L  R  G  F  D  E  G  I  P  E  T  *  R  S  S :   Y  A  H  F  R   : G  S  I  S  I  L  *  G  R  L  *  V  G  *  L  E  A  P  S  I  K   : D  G  G  *  F  *  *  K  A  N  D  G  L  Y  R  G  Y  *  L  H  C  R  W  K  A  D  M  Q  L  I  K  L  L  K  I  L  I  H  C  V  F  R  K  T  T  E  Y  T  C  F  H  L  I  L  I  N  L  Y  I  C  C  Y  S  I  *  L  Q  N  S  A  K  Y  E  Q  I  L  C  N  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0320D04.2" strand="+"/>
                <serials PGL_serial="16" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="117193" stop="117328"/>
                    <exon start="117573" stop="117664"/>
                    <exon start="122584" stop="122701"/>
                    <exon start="122859" stop="122875"/>
                    <exon start="122954" stop="123016"/>
                    <exon start="123168" stop="123254"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>510</number_coding_nucleotides>
                  <number_encoded_amino_acids>170</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TAIVSSQLSLFPSTLQRENRNHLFKSSKQRTCQSTRFHCHKMYVPGFGTSPESTAAQHLHHFFNFIAVKIVAAQLQSYNPEAYEELREFLDKNSLSDGDKFCADLMRESPRHKDLAMRILEVRSAYCKDDFEWDNLKRLASKMVDDSNKKLMTDYIVDTSCIADGKQICN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="120358" e_stop="121006"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.986"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.986">
            <gDNA_exon_boundary e_start="120358" e_stop="121006" e_length="649"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="120358" stop="121006"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E539761" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="120359" stop="120743"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E284788" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="16" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TACGTCAGAAACTGGGAGTCTTGACAAACAGGTGGAGTTTCAAGTCATTCAGAACGAGAGCGATTTAAAGGAACCTGAAGAGGAGGATCAAGAGCCACAGACAGAAACTGATATTCCAGAATCTATGCCATCAGATATCCATCAGAGTATAGCTCAAGATCGGCCAAGGAGGGTTGGAGTTCGGCCACCTACGAGGTATGGTTTTGAGGACATGGTGGGTTATGCACTGCAGGTTGCTGAAGAGGTAGATACATCTGAGCCGTCTACTTACAAAGAAGCCATTTTAAGTTCTTATTCTGAAAAATGGTTTGCCGCTATGGGAGATGAGATGGAGTCCCTACACAAGAATCAGACATGGGATCTGGTCATACAGCCTTCGGGGAGAAAGATTATTACTTGCAAATGGGTTTTCAAGAAGAAGGAAGGGATATCACCAGCAGAAAGAGTCAAGTATAAAGCCAGGGTTGTTGCCAGAGGTTTCAACCAAAGAGAGGGAGTGGACTACAATGAGATCTTCTCACCAGTGGTCAGACATACTTCCATCCGAGTGTTACTAGCGATAGTTGCACATCAGAATCTGGAGCTTGAACAACTTGATGTGAAGACAGCATTTCTACATGGAGAGTTGGAGGAAGAGATATACATGACT</gDNA_template>
            <first_frame> Y  V  R  N  W  E  S  *  Q  T  G  G  V  S  S  H  S  E  R  E  R  F  K  G  T  *  R  G  G  S  R  A  T  D  R  N  *  Y  S  R  I  Y  A  I  R  Y  P  S  E  Y  S  S  R  S  A  K  E  G  W  S  S  A  T  Y  E  V  W  F  *  G  H  G  G  L  C  T  A  G  C  *  R  G  R  Y  I  *  A  V  Y  L  Q  R  S  H  F  K  F  L  F  *  K  M  V  C  R  Y  G  R  *  D  G  V  P  T  Q  E  S  D  M  G  S  G  H  T  A  F  G  E  K  D  Y  Y  L  Q  M  G  F  Q  E  E  G  R  D  I  T  S  R  K  S  Q  V  *  S  Q  G  C  C  Q  R  F  Q  P  K  R  G  S  G  L  Q  *  D  L  L  T  S  G  Q  T  Y  F  H  P  S  V  T  S  D  S  C  T  S  E  S  G  A  *  T  T  *  C  E  D  S  I  S  T  W  R  V  G  G  R  D  I  H  D  </first_frame>
            <second_frame>  T  S  E  T  G  S  L  D  K  Q  V  E  F  Q  V  I  Q  N  E  S  D  L  K  E  P  E  E  E  D  Q  E  P  Q  T  E  T  D  I  P  E  S  M  P  S  D  I  H  Q  S  I  A  Q  D  R  P  R  R  V  G  V  R  P  P  T  R  Y  G  F  E  D  M  V  G  Y  A  L  Q  V  A  E  E  V  D  T  S  E  P  S  T  Y  K  E  A  I  L  S  S  Y  S  E  K  W  F  A  A  M  G  D  E  M  E  S  L  H  K  N  Q  T  W  D  L  V  I  Q  P  S  G  R  K  I  I  T  C  K  W  V  F  K  K  K  E  G  I  S  P  A  E  R  V  K  Y  K  A  R  V  V  A  R  G  F  N  Q  R  E  G  V  D  Y  N  E  I  F  S  P  V  V  R  H  T  S  I  R  V  L  L  A  I  V  A  H  Q  N  L  E  L  E  Q  L  D  V  K  T  A  F  L  H  G  E  L  E  E  E  I  Y  M  T </second_frame>
            <third_frame>   R  Q  K  L  G  V  L  T  N  R  W  S  F  K  S  F  R  T  R  A  I  *  R  N  L  K  R  R  I  K  S  H  R  Q  K  L  I  F  Q  N  L  C  H  Q  I  S  I  R  V  *  L  K  I  G  Q  G  G  L  E  F  G  H  L  R  G  M  V  L  R  T  W  W  V  M  H  C  R  L  L  K  R  *  I  H  L  S  R  L  L  T  K  K  P  F  *  V  L  I  L  K  N  G  L  P  L  W  E  M  R  W  S  P  Y  T  R  I  R  H  G  I  W  S  Y  S  L  R  G  E  R  L  L  L  A  N  G  F  S  R  R  R  K  G  Y  H  Q  Q  K  E  S  S  I  K  P  G  L  L  P  E  V  S  T  K  E  R  E  W  T  T  M  R  S  S  H  Q  W  S  D  I  L  P  S  E  C  Y  *  R  *  L  H  I  R  I  W  S  L  N  N  L  M  *  R  Q  H  F  Y  M  E  S  W  R  K  R  Y  T  *   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0320D04.2" strand="+"/>
                <serials PGL_serial="16" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="120359" stop="121006"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>648</number_coding_nucleotides>
                  <number_encoded_amino_acids>216</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TSETGSLDKQVEFQVIQNESDLKEPEEEDQEPQTETDIPESMPSDIHQSIAQDRPRRVGVRPPTRYGFEDMVGYALQVAEEVDTSEPSTYKEAILSSYSEKWFAAMGDEMESLHKNQTWDLVIQPSGRKIITCKWVFKKKEGISPAERVKYKARVVARGFNQREGVDYNEIFSPVVRHTSIRVLLAIVAHQNLELEQLDVKTAFLHGELEEEIYMT</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="121017" e_stop="121824"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.993"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.993">
            <gDNA_exon_boundary e_start="121017" e_stop="121824" e_length="808"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="121017" stop="121824"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E343338" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="16" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTTTCCAAGTTCCAGGGAAGGAAAATCACGTCTGCAAGTTGAAGAAGTCCTTATATGGACTTAAGCAGTCTCCAAGGCAGTGGTATAAAAGGTTTGACAGCTATATGGTGAAGTTGGGCTATACTCGGAGCTCATATGACTGTTGTGTCTACTACAATAGGCTCAATGATGATTCATTCATCTATCTGGTGCTTTATGTAGATGATATGTTGATAGCTGCAAAGAAGAAGTATGACATTCAGAAGCTGAAGGGTTTACTTAGTGCTGAGTTTGAGATGAAGGATCTGGGAGCCGCTCGGAAGATTTTAGGGATGGAGATCATTAGAGACAGAGAGAGAAGGAAACTTTTCTTGTCACAGAGAAGCTACATTCAGAAGGTCTTAGCGAGGTATGGCATGTCTTCATCTAAGCCCATTGATACCCCCAGTGCTGCCAATATCCATCTCACTGCCATGTTCGCTCCACAGTCAGAAGAAGAGAAGGAGTATATGTCACGAGTCCCTTATGCCAGTGCCGTAGGAAGTTTGATGTATGCTATGGTCTGTACAAGGCCAGATTTAGCACATGCAGTCAGTGTAGTGAGCAGATTCATGGGACAACCAGGGAGAGAACATTGGCAGGCTGTGAAGAGAATTTTCCGGTACCTTAGAGGTACATCTGACGTTGGTCTCATTTATGGAGGTGATACTCAGTGCTTGGTTACTGGCTATTCTGATTCAGACTATGCTGGAGATGTTGACACAAGAAGATCGATGACTGGCTGTGTGTTTACCCTTGGAGGATCTGTCGTCAGTTGGAAGGCAACTTT</gDNA_template>
            <first_frame> V  S  K  F  Q  G  R  K  I  T  S  A  S  *  R  S  P  Y  M  D  L  S  S  L  Q  G  S  G  I  K  G  L  T  A  I  W  *  S  W  A  I  L  G  A  H  M  T  V  V  S  T  T  I  G  S  M  M  I  H  S  S  I  W  C  F  M  *  M  I  C  *  *  L  Q  R  R  S  M  T  F  R  S  *  R  V  Y  L  V  L  S  L  R  *  R  I  W  E  P  L  G  R  F  *  G  W  R  S  L  E  T  E  R  E  G  N  F  S  C  H  R  E  A  T  F  R  R  S  *  R  G  M  A  C  L  H  L  S  P  L  I  P  P  V  L  P  I  S  I  S  L  P  C  S  L  H  S  Q  K  K  R  R  S  I  C  H  E  S  L  M  P  V  P  *  E  V  *  C  M  L  W  S  V  Q  G  Q  I  *  H  M  Q  S  V  *  *  A  D  S  W  D  N  Q  G  E  N  I  G  R  L  *  R  E  F  S  G  T  L  E  V  H  L  T  L  V  S  F  M  E  V  I  L  S  A  W  L  L  A  I  L  I  Q  T  M  L  E  M  L  T  Q  E  D  R  *  L  A  V  C  L  P  L  E  D  L  S  S  V  G  R  Q  L  </first_frame>
            <second_frame>  F  P  S  S  R  E  G  K  S  R  L  Q  V  E  E  V  L  I  W  T  *  A  V  S  K  A  V  V  *  K  V  *  Q  L  Y  G  E  V  G  L  Y  S  E  L  I  *  L  L  C  L  L  Q  *  A  Q  *  *  F  I  H  L  S  G  A  L  C  R  *  Y  V  D  S  C  K  E  E  V  *  H  S  E  A  E  G  F  T  *  C  *  V  *  D  E  G  S  G  S  R  S  E  D  F  R  D  G  D  H  *  R  Q  R  E  K  E  T  F  L  V  T  E  K  L  H  S  E  G  L  S  E  V  W  H  V  F  I  *  A  H  *  Y  P  Q  C  C  Q  Y  P  S  H  C  H  V  R  S  T  V  R  R  R  E  G  V  Y  V  T  S  P  L  C  Q  C  R  R  K  F  D  V  C  Y  G  L  Y  K  A  R  F  S  T  C  S  Q  C  S  E  Q  I  H  G  T  T  R  E  R  T  L  A  G  C  E  E  N  F  P  V  P  *  R  Y  I  *  R  W  S  H  L  W  R  *  Y  S  V  L  G  Y  W  L  F  *  F  R  L  C  W  R  C  *  H  K  K  I  D  D  W  L  C  V  Y  P  W  R  I  C  R  Q  L  E  G  N  F </second_frame>
            <third_frame>   F  Q  V  P  G  K  E  N  H  V  C  K  L  K  K  S  L  Y  G  L  K  Q  S  P  R  Q  W  Y  K  R  F  D  S  Y  M  V  K  L  G  Y  T  R  S  S  Y  D  C  C  V  Y  Y  N  R  L  N  D  D  S  F  I  Y  L  V  L  Y  V  D  D  M  L  I  A  A  K  K  K  Y  D  I  Q  K  L  K  G  L  L  S  A  E  F  E  M  K  D  L  G  A  A  R  K  I  L  G  M  E  I  I  R  D  R  E  R  R  K  L  F  L  S  Q  R  S  Y  I  Q  K  V  L  A  R  Y  G  M  S  S  S  K  P  I  D  T  P  S  A  A  N  I  H  L  T  A  M  F  A  P  Q  S  E  E  E  K  E  Y  M  S  R  V  P  Y  A  S  A  V  G  S  L  M  Y  A  M  V  C  T  R  P  D  L  A  H  A  V  S  V  V  S  R  F  M  G  Q  P  G  R  E  H  W  Q  A  V  K  R  I  F  R  Y  L  R  G  T  S  D  V  G  L  I  Y  G  G  D  T  Q  C  L  V  T  G  Y  S  D  S  D  Y  A  G  D  V  D  T  R  R  S  M  T  G  C  V  F  T  L  G  G  S  V  V  S  W  K  A  T   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0320D04.2" strand="+"/>
                <serials PGL_serial="16" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="121019" stop="121822"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>804</number_coding_nucleotides>
                  <number_encoded_amino_acids>268</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FQVPGKENHVCKLKKSLYGLKQSPRQWYKRFDSYMVKLGYTRSSYDCCVYYNRLNDDSFIYLVLYVDDMLIAAKKKYDIQKLKGLLSAEFEMKDLGAARKILGMEIIRDRERRKLFLSQRSYIQKVLARYGMSSSKPIDTPSAANIHLTAMFAPQSEEEKEYMSRVPYASAVGSLMYAMVCTRPDLAHAVSVVSRFMGQPGREHWQAVKRIFRYLRGTSDVGLIYGGDTQCLVTGYSDSDYAGDVDTRRSMTGCVFTLGGSVVSWKAT</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="17" PGL_strand="+" PGL_start="139097" PGL_stop="146311"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="139097" e_stop="139419"/>
            <exon e_start="139998" e_stop="140130"/>
            <exon e_start="140220" e_stop="140291"/>
            <exon e_start="140381" e_stop="140446"/>
            <exon e_start="140538" e_stop="140609"/>
            <exon e_start="140722" e_stop="140793"/>
            <exon e_start="141400" e_stop="141471"/>
            <exon e_start="141550" e_stop="141615"/>
            <exon e_start="141711" e_stop="141776"/>
            <exon e_start="141862" e_stop="142184"/>
            <exon e_start="142337" e_stop="142593"/>
            <exon e_start="143993" e_stop="144264"/>
            <exon e_start="144347" e_stop="144482"/>
            <exon e_start="144891" e_stop="145033"/>
            <exon e_start="145118" e_stop="145265"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.916" acc_prob="0.912" e_score="0.994"/>
          <exon-intron don_prob="0.943" acc_prob="0.958" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.959" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.879" acc_prob="0.800" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.927" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.986" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.930" e_score="1.000"/>
          <exon-intron don_prob="0.992" acc_prob="0.985" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.809" e_score="1.000"/>
          <exon-intron don_prob="0.990" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.559" acc_prob="0.986" e_score="1.000"/>
          <exon-intron don_prob="0.985" acc_prob="0.992" e_score="1.000"/>
          <exon-only e_score="0.973"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.994">
            <gDNA_exon_boundary e_start="139097" e_stop="139419" e_length="323"/>
          </exon>
          <intron i_serial="1" don_prob="0.916" acc_prob="0.912">
            <gDNA_intron_boundary i_start="139420" i_stop="139997" i_length="578"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="139998" e_stop="140130" e_length="133"/>
          </exon>
          <intron i_serial="2" don_prob="0.943" acc_prob="0.958">
            <gDNA_intron_boundary i_start="140131" i_stop="140219" i_length="89"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="140220" e_stop="140291" e_length="72"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.991">
            <gDNA_intron_boundary i_start="140292" i_stop="140380" i_length="89"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="140381" e_stop="140446" e_length="66"/>
          </exon>
          <intron i_serial="4" don_prob="0.959" acc_prob="0.999">
            <gDNA_intron_boundary i_start="140447" i_stop="140537" i_length="91"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="140538" e_stop="140609" e_length="72"/>
          </exon>
          <intron i_serial="5" don_prob="0.879" acc_prob="0.800">
            <gDNA_intron_boundary i_start="140610" i_stop="140721" i_length="112"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="140722" e_stop="140793" e_length="72"/>
          </exon>
          <intron i_serial="6" don_prob="0.998" acc_prob="0.991">
            <gDNA_intron_boundary i_start="140794" i_stop="141399" i_length="606"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="141400" e_stop="141471" e_length="72"/>
          </exon>
          <intron i_serial="7" don_prob="0.999" acc_prob="0.927">
            <gDNA_intron_boundary i_start="141472" i_stop="141549" i_length="78"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="141550" e_stop="141615" e_length="66"/>
          </exon>
          <intron i_serial="8" don_prob="0.991" acc_prob="0.986">
            <gDNA_intron_boundary i_start="141616" i_stop="141710" i_length="95"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="141711" e_stop="141776" e_length="66"/>
          </exon>
          <intron i_serial="9" don_prob="0.998" acc_prob="0.930">
            <gDNA_intron_boundary i_start="141777" i_stop="141861" i_length="85"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="141862" e_stop="142184" e_length="323"/>
          </exon>
          <intron i_serial="10" don_prob="0.992" acc_prob="0.985">
            <gDNA_intron_boundary i_start="142185" i_stop="142336" i_length="152"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="142337" e_stop="142593" e_length="257"/>
          </exon>
          <intron i_serial="11" don_prob="0.996" acc_prob="0.809">
            <gDNA_intron_boundary i_start="142594" i_stop="143992" i_length="1399"/>
          </intron>
          <exon e_serial="12" e_score="1.000">
            <gDNA_exon_boundary e_start="143993" e_stop="144264" e_length="272"/>
          </exon>
          <intron i_serial="12" don_prob="0.990" acc_prob="0.991">
            <gDNA_intron_boundary i_start="144265" i_stop="144346" i_length="82"/>
          </intron>
          <exon e_serial="13" e_score="1.000">
            <gDNA_exon_boundary e_start="144347" e_stop="144482" e_length="136"/>
          </exon>
          <intron i_serial="13" don_prob="0.559" acc_prob="0.986">
            <gDNA_intron_boundary i_start="144483" i_stop="144890" i_length="408"/>
          </intron>
          <exon e_serial="14" e_score="1.000">
            <gDNA_exon_boundary e_start="144891" e_stop="145033" e_length="143"/>
          </exon>
          <intron i_serial="14" don_prob="0.985" acc_prob="0.992">
            <gDNA_intron_boundary i_start="145034" i_stop="145117" i_length="84"/>
          </intron>
          <exon e_serial="15" e_score="0.973">
            <gDNA_exon_boundary e_start="145118" e_stop="145265" e_length="148"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="139097" stop="139419"/>
              <exon start="139998" stop="140130"/>
              <exon start="140220" stop="140291"/>
              <exon start="140381" stop="140446"/>
              <exon start="140538" stop="140544"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E700569" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="139102" stop="139419"/>
              <exon start="139998" stop="140022"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E335710" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="139153" stop="139419"/>
              <exon start="139998" stop="140130"/>
              <exon start="140220" stop="140291"/>
              <exon start="140381" stop="140446"/>
              <exon start="140538" stop="140546"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E269407" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="139201" stop="139419"/>
              <exon start="139998" stop="140130"/>
              <exon start="140220" stop="140291"/>
              <exon start="140381" stop="140446"/>
              <exon start="140538" stop="140609"/>
              <exon start="140722" stop="140793"/>
              <exon start="141400" stop="141471"/>
              <exon start="141550" stop="141554"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E327594" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="139292" stop="139419"/>
              <exon start="139998" stop="140130"/>
              <exon start="140220" stop="140291"/>
              <exon start="140381" stop="140446"/>
              <exon start="140538" stop="140609"/>
              <exon start="140722" stop="140788"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E438689" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="139322" stop="139419"/>
              <exon start="139998" stop="140130"/>
              <exon start="140220" stop="140291"/>
              <exon start="140381" stop="140446"/>
              <exon start="140538" stop="140609"/>
              <exon start="140722" stop="140793"/>
              <exon start="141400" stop="141471"/>
              <exon start="141550" stop="141615"/>
              <exon start="141711" stop="141766"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E698987" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="140430" stop="140446"/>
              <exon start="140538" stop="140609"/>
              <exon start="140722" stop="140793"/>
              <exon start="141400" stop="141471"/>
              <exon start="141550" stop="141615"/>
              <exon start="141711" stop="141776"/>
              <exon start="141862" stop="142097"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E448732" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="141584" stop="141615"/>
              <exon start="141711" stop="141776"/>
              <exon start="141862" stop="142184"/>
              <exon start="142337" stop="142452"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E709239" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="141588" stop="141615"/>
              <exon start="141711" stop="141776"/>
              <exon start="141862" stop="142184"/>
              <exon start="142337" stop="142593"/>
              <exon start="143993" stop="144185"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E701349" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="141768" stop="141776"/>
              <exon start="141862" stop="142184"/>
              <exon start="142337" stop="142528"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E207075" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="141901" stop="142184"/>
              <exon start="142337" stop="142400"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E574850" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="141956" stop="142184"/>
              <exon start="142337" stop="142593"/>
              <exon start="143993" stop="144055"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E365487" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="142034" stop="142184"/>
              <exon start="142337" stop="142593"/>
              <exon start="143993" stop="144194"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E259985" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="142036" stop="142184"/>
              <exon start="142337" stop="142593"/>
              <exon start="143993" stop="144054"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E260106" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="142106" stop="142184"/>
              <exon start="142337" stop="142593"/>
              <exon start="143993" stop="144264"/>
              <exon start="144347" stop="144482"/>
              <exon start="144891" stop="144953"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E317418" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="142352" stop="142593"/>
              <exon start="143993" stop="144264"/>
              <exon start="144347" stop="144431"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E315998" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143993" stop="144264"/>
              <exon start="144347" stop="144482"/>
              <exon start="144891" stop="145033"/>
              <exon start="145118" stop="145265"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E559549" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="144068" stop="144264"/>
              <exon start="144347" stop="144482"/>
              <exon start="144891" stop="145033"/>
              <exon start="145118" stop="145215"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E551255" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="144068" stop="144264"/>
              <exon start="144347" stop="144482"/>
              <exon start="144891" stop="145033"/>
              <exon start="145118" stop="145215"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E688185" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="144069" stop="144264"/>
              <exon start="144347" stop="144482"/>
              <exon start="144891" stop="144979"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E272836" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="144121" stop="144264"/>
              <exon start="144347" stop="144482"/>
              <exon start="144891" stop="145033"/>
              <exon start="145118" stop="145229"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E473836" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="17" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCTTGTATAAATTTCTCTCTCTTCATTAAAACGAAAGCTTGGAATCGGAGAGTTTCTAAACGATGGTGACACCTACCACTACTGACGATGTTACCTTCTTGTCATTTCCCTGTCTTTCTTTCGCCATGCTTCTTCTTCTTCCTCTTACCTGTGTTTCTGGACAACCCCTTTAATTCTTGACTAACAAGAACGAACAAAACAGAAAATGAATAGAAATAGCTGTAAGCAAGACACCCTTTTCCCCCTTTTGCCACTAGTGGTGATTGTGGCAGTGGGTTTTTACTCATCTTTTGTTGCGGAAGGAAACACTGATCCGAATGATT : TGCAAGCTCTTCAGGTCTTGTATGCTTCACTGAATAATCCTTCACAGCTCTCTAATTGGAAGTCGAATGGTGGCGATCCCTGTGGTGAGTCTTGGAAAGGAATCACTTGTCAGGCCTCTTCTGTTGTTTCAAT : TCAAATTCCTGATTTGGGACTCAATGGAACGTTGGGATACATGCTAAATGGTCTTACCTCGTTAAAGAACTT : GGATTTGAGCGGCAACAACATTCATGATTCTATTCCATATCAGCTTCCACCCAATCTCACTAGCCT : GAATCTTGCAAACAACAATATAAGTGGCAACATTCCGTATTCCTTTGCTGGCATGGTTACACTTAGCTATCT : GAATCTTAGCCATAACTCACTCTCTCAAACAATTGGAGAATTGTTCAGCAACCACTCTGATCTGGGAACCTT : GGATCTGTCCTCAAATAATTTTTCTGGAGATCTCCCCTCTTCATTCAGTTCGTTGACAAATCTTTCCACACT : TCATCTGGAAAACAATCAGCTAAGTGGCCCTCTCAATATCCTGATTGATCTACCTTTGACTAATTT : AAATGTTGCAAAGAATCATTTTAATGGATGGATCCCAAATGAGCTCCTATCTATCCCCAACTTCAT : ATACGATGGGAATTCCTTTGCAAATGGTCCAGCTCCTCCCCCACCACCATACACTGCACCTCCTCCTGGAAGATCTCGCCACAACCGTAGCCATTCTCCTCCTAGTTCACGTACAAGACCAGGTTCTGATGGCCCCCCATCTCCAGAAAATGGTGATAAAAAGAAGGGATTGACAACTGGAGCTATCGTTGGCATAGCTCTTGGATCTTCTCTTGCAATTCTTTTTGCTCTGGTAGCACTTGTATTTTGCTTCCGGAGGGGCAAGGGCAAGGAAATTGCTACAAGACCCTCTACAGGAAGTCTTCCAGTTGGCACAGATAAAG : TGAATATGGAGGTACAAGAGCAAAGGGCGAAGCCTGTGGTTGCTGTTGCTGACTTGAAGCCCCCACCTACCGAAAAGGTGACTGTTGAAATGATACAAGGAAAGAATGGATCTGTCAGGAGAGTGAAGTCTCCAATAACTGCATCTGCTTATACTGTTGCTGCATTGCAAACAGCAACAAACAGCTTCAGTCAAGAAAATCTCATTGGTGAAGGATCTCTTGGGCGTGTTTATAGGGCAGAGTTTCCTAATGGGAAG : ATAATGGTCATAAAAAAGATCGACAGTGCAGCACTGTCGCTGCAGGAGGAAGATAACTTTCTCGAAGCTGTCTCAAATATGTCAAGGCTGAGACACCCAAACATTGTTCAATTGATAGGATATTGTGCTGAGCATGGACAGCGTCTTCTGGTTTATGACCATGTTGCAAATGGTAGCTTGCATGATATGCTGCACTTTGCTGATGAGAGGAGCGAATTGCTTACTTGGAATGCCCGGGTTAGAGTAGCACTTGGCACTGCTCGAGCTTTAGA : GTACTTGCATGAAGTCTGTCTACCTTCTGTTGTACATAGAAACTTCAAATCCGCAAATATTTTACTAGATGAAGAGCTCAATCCCCATTTATCAGATTGTGGGTTAGCAGCTTTGACTCCCAACACAGAACGCCAG : GTGTCATCTACACAGATGATTGGTTCATTCGGCTATAGCGCTCCTGAATTTGCTTTATCTGGAATATACACTGTAAAAAGTGACGTATATAGTTTTGGTGTGGTAATGTTGGAGTTGTTAACAGGAAGGAAGCCACTTGATAG : TTCAAGGGTGAGATCAGAGCAGTCCCTTGTGAGATGGGCTACGCCTCAACTCCATGATATAGATGCCTTGTCAAAAATGGTTGATCCTGCACTAAATGGCATGTATCCTGCAAAGTCTTTGTCCCGTTTCGCTGATATTATTGCACTC</gDNA_template>
            <first_frame> S  C  I  N  F  S  L  F  I  K  T  K  A  W  N  R  R  V  S  K  R  W  *  H  L  P  L  L  T  M  L  P  S  C  H  F  P  V  F  L  S  P  C  F  F  F  F  L  L  P  V  F  L  D  N  P  F  N  S  *  L  T  R  T  N  K  T  E  N  E  *  K  *  L  *  A  R  H  P  F  P  P  F  A  T  S  G  D  C  G  S  G  F  L  L  I  F  C  C  G  R  K  H  *  S  E  *  F :   A  S  S  S  G  L  V  C  F  T  E  *  S  F  T  A  L  *  L  E  V  E  W  W  R  S  L  W  *  V  L  E  R  N  H  L  S  G  L  F  C  C  F  N  :  S  N  S  *  F  G  T  Q  W  N  V  G  I  H  A  K  W  S  Y  L  V  K  E  L  :  G  F  E  R  Q  Q  H  S  *  F  Y  S  I  S  A  S  T  Q  S  H  *  P  :  E  S  C  K  Q  Q  Y  K  W  Q  H  S  V  F  L  C  W  H  G  Y  T  *  L  S  :  E  S  *  P  *  L  T  L  S  N  N  W  R  I  V  Q  Q  P  L  *  S  G  N  L  :  G  S  V  L  K  *  F  F  W  R  S  P  L  F  I  Q  F  V  D  K  S  F  H  T  :  S  S  G  K  Q  S  A  K  W  P  S  Q  Y  P  D  *  S  T  F  D  *  F  :  K  C  C  K  E  S  F  *  W  M  D  P  K  *  A  P  I  Y  P  Q  L  H  :  I  R  W  E  F  L  C  K  W  S  S  S  S  P  T  T  I  H  C  T  S  S  W  K  I  S  P  Q  P  *  P  F  S  S  *  F  T  Y  K  T  R  F  *  W  P  P  I  S  R  K  W  *  *  K  E  G  I  D  N  W  S  Y  R  W  H  S  S  W  I  F  S  C  N  S  F  C  S  G  S  T  C  I  L  L  P  E  G  Q  G  Q  G  N  C  Y  K  T  L  Y  R  K  S  S  S  W  H  R  *  S :   E  Y  G  G  T  R  A  K  G  E  A  C  G  C  C  C  *  L  E  A  P  T  Y  R  K  G  D  C  *  N  D  T  R  K  E  W  I  C  Q  E  S  E  V  S  N  N  C  I  C  L  Y  C  C  C  I  A  N  S  N  K  Q  L  Q  S  R  K  S  H  W  *  R  I  S  W  A  C  L  *  G  R  V  S  *  W  E   : D  N  G  H  K  K  D  R  Q  C  S  T  V  A  A  G  G  R  *  L  S  R  S  C  L  K  Y  V  K  A  E  T  P  K  H  C  S  I  D  R  I  L  C  *  A  W  T  A  S  S  G  L  *  P  C  C  K  W  *  L  A  *  Y  A  A  L  C  *  *  E  E  R  I  A  Y  L  E  C  P  G  *  S  S  T  W  H  C  S  S  F  R  :  V  L  A  *  S  L  S  T  F  C  C  T  *  K  L  Q  I  R  K  Y  F  T  R  *  R  A  Q  S  P  F  I  R  L  W  V  S  S  F  D  S  Q  H  R  T  P   : G  V  I  Y  T  D  D  W  F  I  R  L  *  R  S  *  I  C  F  I  W  N  I  H  C  K  K  *  R  I  *  F  W  C  G  N  V  G  V  V  N  R  K  E  A  T  *  *  :  F  K  G  E  I  R  A  V  P  C  E  M  G  Y  A  S  T  P  *  Y  R  C  L  V  K  N  G  *  S  C  T  K  W  H  V  S  C  K  V  F  V  P  F  R  *  Y  Y  C  T  </first_frame>
            <second_frame>  L  V  *  I  S  L  S  S  L  K  R  K  L  G  I  G  E  F  L  N  D  G  D  T  Y  H  Y  *  R  C  Y  L  L  V  I  S  L  S  F  F  R  H  A  S  S  S  S  S  Y  L  C  F  W  T  T  P  L  I  L  D  *  Q  E  R  T  K  Q  K  M  N  R  N  S  C  K  Q  D  T  L  F  P  L  L  P  L  V  V  I  V  A  V  G  F  Y  S  S  F  V  A  E  G  N  T  D  P  N  D   : L  Q  A  L  Q  V  L  Y  A  S  L  N  N  P  S  Q  L  S  N  W  K  S  N  G  G  D  P  C  G  E  S  W  K  G  I  T  C  Q  A  S  S  V  V  S  I :   Q  I  P  D  L  G  L  N  G  T  L  G  Y  M  L  N  G  L  T  S  L  K  N  L :   D  L  S  G  N  N  I  H  D  S  I  P  Y  Q  L  P  P  N  L  T  S  L :   N  L  A  N  N  N  I  S  G  N  I  P  Y  S  F  A  G  M  V  T  L  S  Y  L :   N  L  S  H  N  S  L  S  Q  T  I  G  E  L  F  S  N  H  S  D  L  G  T  L :   D  L  S  S  N  N  F  S  G  D  L  P  S  S  F  S  S  L  T  N  L  S  T  L :   H  L  E  N  N  Q  L  S  G  P  L  N  I  L  I  D  L  P  L  T  N  L :   N  V  A  K  N  H  F  N  G  W  I  P  N  E  L  L  S  I  P  N  F  I :   Y  D  G  N  S  F  A  N  G  P  A  P  P  P  P  P  Y  T  A  P  P  P  G  R  S  R  H  N  R  S  H  S  P  P  S  S  R  T  R  P  G  S  D  G  P  P  S  P  E  N  G  D  K  K  K  G  L  T  T  G  A  I  V  G  I  A  L  G  S  S  L  A  I  L  F  A  L  V  A  L  V  F  C  F  R  R  G  K  G  K  E  I  A  T  R  P  S  T  G  S  L  P  V  G  T  D  K   : V  N  M  E  V  Q  E  Q  R  A  K  P  V  V  A  V  A  D  L  K  P  P  P  T  E  K  V  T  V  E  M  I  Q  G  K  N  G  S  V  R  R  V  K  S  P  I  T  A  S  A  Y  T  V  A  A  L  Q  T  A  T  N  S  F  S  Q  E  N  L  I  G  E  G  S  L  G  R  V  Y  R  A  E  F  P  N  G  K  :  I  M  V  I  K  K  I  D  S  A  A  L  S  L  Q  E  E  D  N  F  L  E  A  V  S  N  M  S  R  L  R  H  P  N  I  V  Q  L  I  G  Y  C  A  E  H  G  Q  R  L  L  V  Y  D  H  V  A  N  G  S  L  H  D  M  L  H  F  A  D  E  R  S  E  L  L  T  W  N  A  R  V  R  V  A  L  G  T  A  R  A  L  E :   Y  L  H  E  V  C  L  P  S  V  V  H  R  N  F  K  S  A  N  I  L  L  D  E  E  L  N  P  H  L  S  D  C  G  L  A  A  L  T  P  N  T  E  R  Q  :  V  S  S  T  Q  M  I  G  S  F  G  Y  S  A  P  E  F  A  L  S  G  I  Y  T  V  K  S  D  V  Y  S  F  G  V  V  M  L  E  L  L  T  G  R  K  P  L  D  S :   S  R  V  R  S  E  Q  S  L  V  R  W  A  T  P  Q  L  H  D  I  D  A  L  S  K  M  V  D  P  A  L  N  G  M  Y  P  A  K  S  L  S  R  F  A  D  I  I  A  L </second_frame>
            <third_frame>   L  Y  K  F  L  S  L  H  *  N  E  S  L  E  S  E  S  F  *  T  M  V  T  P  T  T  T  D  D  V  T  F  L  S  F  P  C  L  S  F  A  M  L  L  L  L  P  L  T  C  V  S  G  Q  P  L  *  F  L  T  N  K  N  E  Q  N  R  K  *  I  E  I  A  V  S  K  T  P  F  S  P  F  C  H  *  W  *  L  W  Q  W  V  F  T  H  L  L  L  R  K  E  T  L  I  R  M  I  :  C  K  L  F  R  S  C  M  L  H  *  I  I  L  H  S  S  L  I  G  S  R  M  V  A  I  P  V  V  S  L  G  K  E  S  L  V  R  P  L  L  L  F  Q   : F  K  F  L  I  W  D  S  M  E  R  W  D  T  C  *  M  V  L  P  R  *  R  T   : W  I  *  A  A  T  T  F  M  I  L  F  H  I  S  F  H  P  I  S  L  A   : *  I  L  Q  T  T  I  *  V  A  T  F  R  I  P  L  L  A  W  L  H  L  A  I   : *  I  L  A  I  T  H  S  L  K  Q  L  E  N  C  S  A  T  T  L  I  W  E  P   : W  I  C  P  Q  I  I  F  L  E  I  S  P  L  H  S  V  R  *  Q  I  F  P  H   : F  I  W  K  T  I  S  *  V  A  L  S  I  S  *  L  I  Y  L  *  L  I   : *  M  L  Q  R  I  I  L  M  D  G  S  Q  M  S  S  Y  L  S  P  T  S   : Y  T  M  G  I  P  L  Q  M  V  Q  L  L  P  H  H  H  T  L  H  L  L  L  E  D  L  A  T  T  V  A  I  L  L  L  V  H  V  Q  D  Q  V  L  M  A  P  H  L  Q  K  M  V  I  K  R  R  D  *  Q  L  E  L  S  L  A  *  L  L  D  L  L  L  Q  F  F  L  L  W  *  H  L  Y  F  A  S  G  G  A  R  A  R  K  L  L  Q  D  P  L  Q  E  V  F  Q  L  A  Q  I  K  :  *  I  W  R  Y  K  S  K  G  R  S  L  W  L  L  L  L  T  *  S  P  H  L  P  K  R  *  L  L  K  *  Y  K  E  R  M  D  L  S  G  E  *  S  L  Q  *  L  H  L  L  I  L  L  L  H  C  K  Q  Q  Q  T  A  S  V  K  K  I  S  L  V  K  D  L  L  G  V  F  I  G  Q  S  F  L  M  G  R :   *  W  S  *  K  R  S  T  V  Q  H  C  R  C  R  R  K  I  T  F  S  K  L  S  Q  I  C  Q  G  *  D  T  Q  T  L  F  N  *  *  D  I  V  L  S  M  D  S  V  F  W  F  M  T  M  L  Q  M  V  A  C  M  I  C  C  T  L  L  M  R  G  A  N  C  L  L  G  M  P  G  L  E  *  H  L  A  L  L  E  L  *   : S  T  C  M  K  S  V  Y  L  L  L  Y  I  E  T  S  N  P  Q  I  F  Y  *  M  K  S  S  I  P  I  Y  Q  I  V  G  *  Q  L  *  L  P  T  Q  N  A  R :   C  H  L  H  R  *  L  V  H  S  A  I  A  L  L  N  L  L  Y  L  E  Y  T  L  *  K  V  T  Y  I  V  L  V  W  *  C  W  S  C  *  Q  E  G  S  H  L  I   : V  Q  G  *  D  Q  S  S  P  L  *  D  G  L  R  L  N  S  M  I  *  M  P  C  Q  K  W  L  I  L  H  *  M  A  C  I  L  Q  S  L  C  P  V  S  L  I  L  L  H   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0320D04.2" strand="+"/>
                <serials PGL_serial="17" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="139281" stop="139419"/>
                    <exon start="139998" stop="140130"/>
                    <exon start="140220" stop="140291"/>
                    <exon start="140381" stop="140446"/>
                    <exon start="140538" stop="140609"/>
                    <exon start="140722" stop="140793"/>
                    <exon start="141400" stop="141471"/>
                    <exon start="141550" stop="141615"/>
                    <exon start="141711" stop="141776"/>
                    <exon start="141862" stop="142184"/>
                    <exon start="142337" stop="142593"/>
                    <exon start="143993" stop="144264"/>
                    <exon start="144347" stop="144482"/>
                    <exon start="144891" stop="145033"/>
                    <exon start="145118" stop="145265"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>2037</number_coding_nucleotides>
                  <number_encoded_amino_acids>679</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QERTKQKMNRNSCKQDTLFPLLPLVVIVAVGFYSSFVAEGNTDPNDLQALQVLYASLNNPSQLSNWKSNGGDPCGESWKGITCQASSVVSIQIPDLGLNGTLGYMLNGLTSLKNLDLSGNNIHDSIPYQLPPNLTSLNLANNNISGNIPYSFAGMVTLSYLNLSHNSLSQTIGELFSNHSDLGTLDLSSNNFSGDLPSSFSSLTNLSTLHLENNQLSGPLNILIDLPLTNLNVAKNHFNGWIPNELLSIPNFIYDGNSFANGPAPPPPPYTAPPPGRSRHNRSHSPPSSRTRPGSDGPPSPENGDKKKGLTTGAIVGIALGSSLAILFALVALVFCFRRGKGKEIATRPSTGSLPVGTDKVNMEVQEQRAKPVVAVADLKPPPTEKVTVEMIQGKNGSVRRVKSPITASAYTVAALQTATNSFSQENLIGEGSLGRVYRAEFPNGKIMVIKKIDSAALSLQEEDNFLEAVSNMSRLRHPNIVQLIGYCAEHGQRLLVYDHVANGSLHDMLHFADERSELLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDEELNPHLSDCGLAALTPNTERQVSSTQMIGSFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRVRSEQSLVRWATPQLHDIDALSKMVDPALNGMYPAKSLSRFADIIAL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="139097" e_stop="139419"/>
            <exon e_start="139998" e_stop="140130"/>
            <exon e_start="140220" e_stop="140291"/>
            <exon e_start="140381" e_stop="140446"/>
            <exon e_start="140538" e_stop="140609"/>
            <exon e_start="140722" e_stop="140793"/>
            <exon e_start="141400" e_stop="141453"/>
            <exon e_start="146179" e_stop="146311"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.916" acc_prob="0.912" e_score="0.994"/>
          <exon-intron don_prob="0.943" acc_prob="0.958" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.959" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.879" acc_prob="0.800" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.991" e_score="0.970"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.981"/>
          <exon-only e_score="0.962"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.994">
            <gDNA_exon_boundary e_start="139097" e_stop="139419" e_length="323"/>
          </exon>
          <intron i_serial="1" don_prob="0.916" acc_prob="0.912">
            <gDNA_intron_boundary i_start="139420" i_stop="139997" i_length="578"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="139998" e_stop="140130" e_length="133"/>
          </exon>
          <intron i_serial="2" don_prob="0.943" acc_prob="0.958">
            <gDNA_intron_boundary i_start="140131" i_stop="140219" i_length="89"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="140220" e_stop="140291" e_length="72"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.991">
            <gDNA_intron_boundary i_start="140292" i_stop="140380" i_length="89"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="140381" e_stop="140446" e_length="66"/>
          </exon>
          <intron i_serial="4" don_prob="0.959" acc_prob="0.999">
            <gDNA_intron_boundary i_start="140447" i_stop="140537" i_length="91"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="140538" e_stop="140609" e_length="72"/>
          </exon>
          <intron i_serial="5" don_prob="0.879" acc_prob="0.800">
            <gDNA_intron_boundary i_start="140610" i_stop="140721" i_length="112"/>
          </intron>
          <exon e_serial="6" e_score="0.970">
            <gDNA_exon_boundary e_start="140722" e_stop="140793" e_length="72"/>
          </exon>
          <intron i_serial="6" don_prob="0.998" acc_prob="0.991">
            <gDNA_intron_boundary i_start="140794" i_stop="141399" i_length="606"/>
          </intron>
          <exon e_serial="7" e_score="0.981">
            <gDNA_exon_boundary e_start="141400" e_stop="141453" e_length="54"/>
          </exon>
          <intron i_serial="7" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="141454" i_stop="146178" i_length="4725"/>
          </intron>
          <exon e_serial="8" e_score="0.962">
            <gDNA_exon_boundary e_start="146179" e_stop="146311" e_length="133"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="139097" stop="139419"/>
              <exon start="139998" stop="140130"/>
              <exon start="140220" stop="140291"/>
              <exon start="140381" stop="140446"/>
              <exon start="140538" stop="140544"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E700569" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="139102" stop="139419"/>
              <exon start="139998" stop="140022"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E335710" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="139153" stop="139419"/>
              <exon start="139998" stop="140130"/>
              <exon start="140220" stop="140291"/>
              <exon start="140381" stop="140446"/>
              <exon start="140538" stop="140546"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E269407" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="139292" stop="139419"/>
              <exon start="139998" stop="140130"/>
              <exon start="140220" stop="140291"/>
              <exon start="140381" stop="140446"/>
              <exon start="140538" stop="140609"/>
              <exon start="140722" stop="140788"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E438689" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="140394" stop="140446"/>
              <exon start="140538" stop="140609"/>
              <exon start="140722" stop="140793"/>
              <exon start="141400" stop="141453"/>
              <exon start="146179" stop="146311"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E423266" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="140394" stop="140446"/>
              <exon start="140538" stop="140609"/>
              <exon start="140722" stop="140793"/>
              <exon start="141400" stop="141453"/>
              <exon start="146179" stop="146311"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E450090" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="140394" stop="140446"/>
              <exon start="140538" stop="140609"/>
              <exon start="140722" stop="140793"/>
              <exon start="141400" stop="141453"/>
              <exon start="146179" stop="146293"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E423267" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="17" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCTTGTATAAATTTCTCTCTCTTCATTAAAACGAAAGCTTGGAATCGGAGAGTTTCTAAACGATGGTGACACCTACCACTACTGACGATGTTACCTTCTTGTCATTTCCCTGTCTTTCTTTCGCCATGCTTCTTCTTCTTCCTCTTACCTGTGTTTCTGGACAACCCCTTTAATTCTTGACTAACAAGAACGAACAAAACAGAAAATGAATAGAAATAGCTGTAAGCAAGACACCCTTTTCCCCCTTTTGCCACTAGTGGTGATTGTGGCAGTGGGTTTTTACTCATCTTTTGTTGCGGAAGGAAACACTGATCCGAATGATT : TGCAAGCTCTTCAGGTCTTGTATGCTTCACTGAATAATCCTTCACAGCTCTCTAATTGGAAGTCGAATGGTGGCGATCCCTGTGGTGAGTCTTGGAAAGGAATCACTTGTCAGGCCTCTTCTGTTGTTTCAAT : TCAAATTCCTGATTTGGGACTCAATGGAACGTTGGGATACATGCTAAATGGTCTTACCTCGTTAAAGAACTT : GGATTTGAGCGGCAACAACATTCATGATTCTATTCCATATCAGCTTCCACCCAATCTCACTAGCCT : GAATCTTGCAAACAACAATATAAGTGGCAACATTCCGTATTCCTTTGCTGGCATGGTTACACTTAGCTATCT : GAATCTTAGCCATAACTCACTCTCTCAAACAATTGGAGAATTGTTCAGCAACCACTCTGATCTGGGAACCTT : GGATCTGTCCTCAAATAATTTTTCTGGAGATCTCCCCTCTTCATTCAGTTCGTT : AAAAAAAAAAGAAGCTTTTTTGCATCCCAATTTGAGGTACATAATTCACTGACAATGTCCTCCAGAGTATATTTACAAACCATCTTGGGATACTGGATACATTTTATTGTCAATAAGAACATTGCTACACATT</gDNA_template>
            <first_frame> S  C  I  N  F  S  L  F  I  K  T  K  A  W  N  R  R  V  S  K  R  W  *  H  L  P  L  L  T  M  L  P  S  C  H  F  P  V  F  L  S  P  C  F  F  F  F  L  L  P  V  F  L  D  N  P  F  N  S  *  L  T  R  T  N  K  T  E  N  E  *  K  *  L  *  A  R  H  P  F  P  P  F  A  T  S  G  D  C  G  S  G  F  L  L  I  F  C  C  G  R  K  H  *  S  E  *  F :   A  S  S  S  G  L  V  C  F  T  E  *  S  F  T  A  L  *  L  E  V  E  W  W  R  S  L  W  *  V  L  E  R  N  H  L  S  G  L  F  C  C  F  N  :  S  N  S  *  F  G  T  Q  W  N  V  G  I  H  A  K  W  S  Y  L  V  K  E  L  :  G  F  E  R  Q  Q  H  S  *  F  Y  S  I  S  A  S  T  Q  S  H  *  P  :  E  S  C  K  Q  Q  Y  K  W  Q  H  S  V  F  L  C  W  H  G  Y  T  *  L  S  :  E  S  *  P  *  L  T  L  S  N  N  W  R  I  V  Q  Q  P  L  *  S  G  N  L  :  G  S  V  L  K  *  F  F  W  R  S  P  L  F  I  Q  F  V  :  K  K  K  R  S  F  F  A  S  Q  F  E  V  H  N  S  L  T  M  S  S  R  V  Y  L  Q  T  I  L  G  Y  W  I  H  F  I  V  N  K  N  I  A  T  H  </first_frame>
            <second_frame>  L  V  *  I  S  L  S  S  L  K  R  K  L  G  I  G  E  F  L  N  D  G  D  T  Y  H  Y  *  R  C  Y  L  L  V  I  S  L  S  F  F  R  H  A  S  S  S  S  S  Y  L  C  F  W  T  T  P  L  I  L  D  *  Q  E  R  T  K  Q  K  M  N  R  N  S  C  K  Q  D  T  L  F  P  L  L  P  L  V  V  I  V  A  V  G  F  Y  S  S  F  V  A  E  G  N  T  D  P  N  D   : L  Q  A  L  Q  V  L  Y  A  S  L  N  N  P  S  Q  L  S  N  W  K  S  N  G  G  D  P  C  G  E  S  W  K  G  I  T  C  Q  A  S  S  V  V  S  I :   Q  I  P  D  L  G  L  N  G  T  L  G  Y  M  L  N  G  L  T  S  L  K  N  L :   D  L  S  G  N  N  I  H  D  S  I  P  Y  Q  L  P  P  N  L  T  S  L :   N  L  A  N  N  N  I  S  G  N  I  P  Y  S  F  A  G  M  V  T  L  S  Y  L :   N  L  S  H  N  S  L  S  Q  T  I  G  E  L  F  S  N  H  S  D  L  G  T  L :   D  L  S  S  N  N  F  S  G  D  L  P  S  S  F  S  S  L :   K  K  K  E  A  F  L  H  P  N  L  R  Y  I  I  H  *  Q  C  P  P  E  Y  I  Y  K  P  S  W  D  T  G  Y  I  L  L  S  I  R  T  L  L  H  I </second_frame>
            <third_frame>   L  Y  K  F  L  S  L  H  *  N  E  S  L  E  S  E  S  F  *  T  M  V  T  P  T  T  T  D  D  V  T  F  L  S  F  P  C  L  S  F  A  M  L  L  L  L  P  L  T  C  V  S  G  Q  P  L  *  F  L  T  N  K  N  E  Q  N  R  K  *  I  E  I  A  V  S  K  T  P  F  S  P  F  C  H  *  W  *  L  W  Q  W  V  F  T  H  L  L  L  R  K  E  T  L  I  R  M  I  :  C  K  L  F  R  S  C  M  L  H  *  I  I  L  H  S  S  L  I  G  S  R  M  V  A  I  P  V  V  S  L  G  K  E  S  L  V  R  P  L  L  L  F  Q   : F  K  F  L  I  W  D  S  M  E  R  W  D  T  C  *  M  V  L  P  R  *  R  T   : W  I  *  A  A  T  T  F  M  I  L  F  H  I  S  F  H  P  I  S  L  A   : *  I  L  Q  T  T  I  *  V  A  T  F  R  I  P  L  L  A  W  L  H  L  A  I   : *  I  L  A  I  T  H  S  L  K  Q  L  E  N  C  S  A  T  T  L  I  W  E  P   : W  I  C  P  Q  I  I  F  L  E  I  S  P  L  H  S  V  R   : *  K  K  K  K  L  F  C  I  P  I  *  G  T  *  F  T  D  N  V  L  Q  S  I  F  T  N  H  L  G  I  L  D  T  F  Y  C  Q  *  E  H  C  Y  T   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0320D04.2" strand="+"/>
                <serials PGL_serial="17" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="139281" stop="139419"/>
                    <exon start="139998" stop="140130"/>
                    <exon start="140220" stop="140291"/>
                    <exon start="140381" stop="140446"/>
                    <exon start="140538" stop="140609"/>
                    <exon start="140722" stop="140793"/>
                    <exon start="141400" stop="141453"/>
                    <exon start="146179" stop="146230"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>657</number_coding_nucleotides>
                  <number_encoded_amino_acids>219</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QERTKQKMNRNSCKQDTLFPLLPLVVIVAVGFYSSFVAEGNTDPNDLQALQVLYASLNNPSQLSNWKSNGGDPCGESWKGITCQASSVVSIQIPDLGLNGTLGYMLNGLTSLKNLDLSGNNIHDSIPYQLPPNLTSLNLANNNISGNIPYSFAGMVTLSYLNLSHNSLSQTIGELFSNHSDLGTLDLSSNNFSGDLPSSFSSLKKKEAFLHPNLRYIIH*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="145904" e_stop="146186"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="145904" e_stop="146186" e_length="283"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="145904" stop="146186"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E555262" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="17" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CCCCAATGTCTGAAGTTGTGCAAGCACTGGTTCGGTTAATGCAAAGAGCAAGTGTGGTCAAAAGGCGATCCAGTGATGAATCAGCTTTCACATACAAGACTCCGGATCATGAGACGGTTGACATGCCATAGATAAAACATACACGACGAAGCAGCCTTTGCAATTTTGTAAGTAACTTCTGTGAAGGTCAAGAGTAACTGTGGCAGATGAAACTGGGAGGTGTCAATACCAGGGACATTAAATATGTAATTATTTTTCACATCTTCGTCGTTTAAAAAAAAAA</gDNA_template>
            <first_frame> P  Q  C  L  K  L  C  K  H  W  F  G  *  C  K  E  Q  V  W  S  K  G  D  P  V  M  N  Q  L  S  H  T  R  L  R  I  M  R  R  L  T  C  H  R  *  N  I  H  D  E  A  A  F  A  I  L  *  V  T  S  V  K  V  K  S  N  C  G  R  *  N  W  E  V  S  I  P  G  T  L  N  M  *  L  F  F  T  S  S  S  F  K  K  K  </first_frame>
            <second_frame>  P  N  V  *  S  C  A  S  T  G  S  V  N  A  K  S  K  C  G  Q  K  A  I  Q  *  *  I  S  F  H  I  Q  D  S  G  S  *  D  G  *  H  A  I  D  K  T  Y  T  T  K  Q  P  L  Q  F  C  K  *  L  L  *  R  S  R  V  T  V  A  D  E  T  G  R  C  Q  Y  Q  G  H  *  I  C  N  Y  F  S  H  L  R  R  L  K  K  K </second_frame>
            <third_frame>   P  M  S  E  V  V  Q  A  L  V  R  L  M  Q  R  A  S  V  V  K  R  R  S  S  D  E  S  A  F  T  Y  K  T  P  D  H  E  T  V  D  M  P  *  I  K  H  T  R  R  S  S  L  C  N  F  V  S  N  F  C  E  G  Q  E  *  L  W  Q  M  K  L  G  G  V  N  T  R  D  I  K  Y  V  I  I  F  H  I  F  V  V  *  K  K   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0320D04.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="18" PGL_strand="-" PGL_start="146939" PGL_stop="146493"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="146939" e_stop="146493"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.901"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.901">
            <gDNA_exon_boundary e_start="146939" e_stop="146493" e_length="447"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="146939" stop="146617"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E393076" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="146939" stop="146634"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E393075" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="146939" stop="146789"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E392727" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="146938" stop="146493"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E200845" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="18" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TAAAATGTATGTATATTGCATAATTATAAGTGTATAGCAAGAAAATATATGTTTTTTCTCGCTTTATACAAAAACAGAAACACAATATATACACTTCTGTTGTATAAAGCTAGAAAAATTGTATTTCACTGCAATTGTATAATTCACAATTGTATAATTCTTTAGCCTTTTTCTCTGCAATATTTGAAGTAAAATGTTTGTAAATTATATAATTAAGTGTATAACACGAAGATATACATTTTTGCATGTGTATATACAATTTTCTCTCGCTTTATACAAAACAGAAACAGAAATTATACACTTCTGTGTATAAAGCGAGAGAGACGAGAATGGGAGAGTGGCGAGCGAGACTTCTGGGAGAGAGACGCCTGGCAAATTTTTGTCAATGTTTGCTATGGAGCACAATTAAATCAAACCCTAGCTATTCAATTTAATTTAGGTTATTAG</gDNA_template>
            <first_frame> *  N  V  C  I  L  H  N  Y  K  C  I  A  R  K  Y  M  F  F  L  A  L  Y  K  N  R  N  T  I  Y  T  L  L  L  Y  K  A  R  K  I  V  F  H  C  N  C  I  I  H  N  C  I  I  L  *  P  F  S  L  Q  Y  L  K  *  N  V  C  K  L  Y  N  *  V  Y  N  T  K  I  Y  I  F  A  C  V  Y  T  I  F  S  R  F  I  Q  N  R  N  R  N  Y  T  L  L  C  I  K  R  E  R  R  E  W  E  S  G  E  R  D  F  W  E  R  D  A  W  Q  I  F  V  N  V  C  Y  G  A  Q  L  N  Q  T  L  A  I  Q  F  N  L  G  Y  * </first_frame>
            <second_frame>  K  M  Y  V  Y  C  I  I  I  S  V  *  Q  E  N  I  C  F  F  S  L  Y  T  K  T  E  T  Q  Y  I  H  F  C  C  I  K  L  E  K  L  Y  F  T  A  I  V  *  F  T  I  V  *  F  F  S  L  F  L  C  N  I  *  S  K  M  F  V  N  Y  I  I  K  C  I  T  R  R  Y  T  F  L  H  V  Y  I  Q  F  S  L  A  L  Y  K  T  E  T  E  I  I  H  F  C  V  *  S  E  R  D  E  N  G  R  V  A  S  E  T  S  G  R  E  T  P  G  K  F  L  S  M  F  A  M  E  H  N  *  I  K  P  *  L  F  N  L  I  *  V  I   </second_frame>
            <third_frame>   K  C  M  Y  I  A  *  L  *  V  Y  S  K  K  I  Y  V  F  S  R  F  I  Q  K  Q  K  H  N  I  Y  T  S  V  V  *  S  *  K  N  C  I  S  L  Q  L  Y  N  S  Q  L  Y  N  S  L  A  F  F  S  A  I  F  E  V  K  C  L  *  I  I  *  L  S  V  *  H  E  D  I  H  F  C  M  C  I  Y  N  F  L  S  L  Y  T  K  Q  K  Q  K  L  Y  T  S  V  Y  K  A  R  E  T  R  M  G  E  W  R  A  R  L  L  G  E  R  R  L  A  N  F  C  Q  C  L  L  W  S  T  I  K  S  N  P  S  Y  S  I  *  F  R  L  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0320D04.2" strand="-"/>
                <serials PGL_serial="18" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="146723" stop="146493"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>228</number_coding_nucleotides>
                  <number_encoded_amino_acids>76</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VYNTKIYIFACVYTIFSRFIQNRNRNYTLLCIKRERREWESGERDFWERDAWQIFVNVCYGAQLNQTLAIQFNLGY*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0320D04.2" strand="-"/>
                <serials PGL_serial="18" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="146715" stop="146506"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>207</number_coding_nucleotides>
                  <number_encoded_amino_acids>69</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>HEDIHFCMCIYNFLSLYTKQKQKLYTSVYKARETRMGEWRARLLGERRLANFCQCLLWSTIKSNPSYSI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="19" PGL_strand="+" PGL_start="152004" PGL_stop="155890"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="152004" e_stop="152372"/>
            <exon e_start="152784" e_stop="152879"/>
            <exon e_start="152960" e_stop="153059"/>
            <exon e_start="153145" e_stop="153206"/>
            <exon e_start="153352" e_stop="153440"/>
            <exon e_start="154193" e_stop="154313"/>
            <exon e_start="154395" e_stop="154538"/>
            <exon e_start="154660" e_stop="154700"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.997" acc_prob="0.998" e_score="0.973"/>
          <exon-intron don_prob="0.994" acc_prob="0.976" e_score="0.969"/>
          <exon-intron don_prob="0.463" acc_prob="0.972" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.976" e_score="1.000"/>
          <exon-intron don_prob="0.992" acc_prob="0.978" e_score="1.000"/>
          <exon-intron don_prob="0.985" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.988" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.973">
            <gDNA_exon_boundary e_start="152004" e_stop="152372" e_length="369"/>
          </exon>
          <intron i_serial="1" don_prob="0.997" acc_prob="0.998">
            <gDNA_intron_boundary i_start="152373" i_stop="152783" i_length="411"/>
          </intron>
          <exon e_serial="2" e_score="0.969">
            <gDNA_exon_boundary e_start="152784" e_stop="152879" e_length="96"/>
          </exon>
          <intron i_serial="2" don_prob="0.994" acc_prob="0.976">
            <gDNA_intron_boundary i_start="152880" i_stop="152959" i_length="80"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="152960" e_stop="153059" e_length="100"/>
          </exon>
          <intron i_serial="3" don_prob="0.463" acc_prob="0.972">
            <gDNA_intron_boundary i_start="153060" i_stop="153144" i_length="85"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="153145" e_stop="153206" e_length="62"/>
          </exon>
          <intron i_serial="4" don_prob="0.999" acc_prob="0.976">
            <gDNA_intron_boundary i_start="153207" i_stop="153351" i_length="145"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="153352" e_stop="153440" e_length="89"/>
          </exon>
          <intron i_serial="5" don_prob="0.992" acc_prob="0.978">
            <gDNA_intron_boundary i_start="153441" i_stop="154192" i_length="752"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="154193" e_stop="154313" e_length="121"/>
          </exon>
          <intron i_serial="6" don_prob="0.985" acc_prob="0.991">
            <gDNA_intron_boundary i_start="154314" i_stop="154394" i_length="81"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="154395" e_stop="154538" e_length="144"/>
          </exon>
          <intron i_serial="7" don_prob="0.988" acc_prob="0.000">
            <gDNA_intron_boundary i_start="154539" i_stop="154659" i_length="121"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="154660" e_stop="154700" e_length="41"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="152004" stop="152372"/>
              <exon start="152784" stop="152879"/>
              <exon start="152960" stop="152972"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E272898" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="152057" stop="152372"/>
              <exon start="152784" stop="152879"/>
              <exon start="152960" stop="153059"/>
              <exon start="153145" stop="153152"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E364559" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="152853" stop="152879"/>
              <exon start="152960" stop="153059"/>
              <exon start="153145" stop="153206"/>
              <exon start="153352" stop="153440"/>
              <exon start="154193" stop="154313"/>
              <exon start="154395" stop="154538"/>
              <exon start="154660" stop="154700"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E325276" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="19" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CAAACCTTTAAAAGATAAAAAAATTCTATGACTTCTCGGAGCAATTCTTTTTCTAATTTCTCAGAATCATCGTACGAATACGATGATAAGGATTGTTCCACCGTCACGACTTCGGATCGGGATGAGCCCCTGAATCCGGGTCATAGGAACAACTCGTTTAACGGGTTATTGGGTTTCACGTTCGGGTCCAAGAAGATGAGGAAGAAGAAACCCTTTTGTCAGGAAAAAGCAATTGTCGGGTTGGCTCTATTGGTGATCGGTTTTGTCGGGATGAATTGGTGGATGCTTTCCCGGATCCAGAACTCGGGTCGGGCTTCTCAGGTTGAGTTCAGGTTCTTGGAAGATAATTCCTCCACTCTATCAATTCGG : GAAGAACTGCTAAGGCTTGGGCTTGGCGAAGAGAGAAAGCCTCAGAAAACAATCTACGCACGATTGCTGGCTAAAGCTGCTCATTCCTTAGCTGAG : GGACAGAAAAAATCCGAGCCAAAAGATTTGTGGGCTGAACCGTATTTTGTTGCTTCCTCTTGGAAACCTTGTGCTGAGCAGCGTCAATGGCTACCTAGTG : AGGGAAAAAATGGTTACATTATTGTCACTGCAAATGGTGGGATAAATCAGCAGCGAGTAGCT : GTCTGCAATATTGTTGCTATTGCAAGATTACTCGATGCAACCTTGGTTCTTCCGAAATTTCTGTACAGTAGTGTTTGGAAAGATGTGAG : CCAGTTTGGCGAGATCTACCAGGAGGAGCATTTCATTGACTACCTGAAACCTGATATTCGTATAGTTAGAGAACTTCCTCAGGAGTTGCAGTCATTAGATCTAGAGGCCATTGGCAGTTTG : GTGACAGATGCAGATGTTGTAAAAGAAGCAAAGCCAGGTTTCTACAAGAAATATATTCTTCCTATTTTACATAAAAACGGAGTTGTTCATTTTCTTGGATTTGGGAATCGATTGGCATCTGACCCGTTACCACCTCAGGTGCAG : AGACTTCGATGCAGATGTAATTTTCATGCTCTGAAATTTGT</gDNA_template>
            <first_frame> Q  T  F  K  R  *  K  N  S  M  T  S  R  S  N  S  F  S  N  F  S  E  S  S  Y  E  Y  D  D  K  D  C  S  T  V  T  T  S  D  R  D  E  P  L  N  P  G  H  R  N  N  S  F  N  G  L  L  G  F  T  F  G  S  K  K  M  R  K  K  K  P  F  C  Q  E  K  A  I  V  G  L  A  L  L  V  I  G  F  V  G  M  N  W  W  M  L  S  R  I  Q  N  S  G  R  A  S  Q  V  E  F  R  F  L  E  D  N  S  S  T  L  S  I  R  :  E  E  L  L  R  L  G  L  G  E  E  R  K  P  Q  K  T  I  Y  A  R  L  L  A  K  A  A  H  S  L  A  E  :  G  Q  K  K  S  E  P  K  D  L  W  A  E  P  Y  F  V  A  S  S  W  K  P  C  A  E  Q  R  Q  W  L  P  S   : E  G  K  N  G  Y  I  I  V  T  A  N  G  G  I  N  Q  Q  R  V  A  :  V  C  N  I  V  A  I  A  R  L  L  D  A  T  L  V  L  P  K  F  L  Y  S  S  V  W  K  D  V  S :   Q  F  G  E  I  Y  Q  E  E  H  F  I  D  Y  L  K  P  D  I  R  I  V  R  E  L  P  Q  E  L  Q  S  L  D  L  E  A  I  G  S  L  :  V  T  D  A  D  V  V  K  E  A  K  P  G  F  Y  K  K  Y  I  L  P  I  L  H  K  N  G  V  V  H  F  L  G  F  G  N  R  L  A  S  D  P  L  P  P  Q  V  Q  :  R  L  R  C  R  C  N  F  H  A  L  K  F   </first_frame>
            <second_frame>  K  P  L  K  D  K  K  I  L  *  L  L  G  A  I  L  F  L  I  S  Q  N  H  R  T  N  T  M  I  R  I  V  P  P  S  R  L  R  I  G  M  S  P  *  I  R  V  I  G  T  T  R  L  T  G  Y  W  V  S  R  S  G  P  R  R  *  G  R  R  N  P  F  V  R  K  K  Q  L  S  G  W  L  Y  W  *  S  V  L  S  G  *  I  G  G  C  F  P  G  S  R  T  R  V  G  L  L  R  L  S  S  G  S  W  K  I  I  P  P  L  Y  Q  F  G :   K  N  C  *  G  L  G  L  A  K  R  E  S  L  R  K  Q  S  T  H  D  C  W  L  K  L  L  I  P  *  L  R :   D  R  K  N  P  S  Q  K  I  C  G  L  N  R  I  L  L  L  P  L  G  N  L  V  L  S  S  V  N  G  Y  L  V  :  R  E  K  M  V  T  L  L  S  L  Q  M  V  G  *  I  S  S  E  *  L :   S  A  I  L  L  L  L  Q  D  Y  S  M  Q  P  W  F  F  R  N  F  C  T  V  V  F  G  K  M  *   : A  S  L  A  R  S  T  R  R  S  I  S  L  T  T  *  N  L  I  F  V  *  L  E  N  F  L  R  S  C  S  H  *  I  *  R  P  L  A  V  W :   *  Q  M  Q  M  L  *  K  K  Q  S  Q  V  S  T  R  N  I  F  F  L  F  Y  I  K  T  E  L  F  I  F  L  D  L  G  I  D  W  H  L  T  R  Y  H  L  R  C  R :   D  F  D  A  D  V  I  F  M  L  *  N  L  </second_frame>
            <third_frame>   N  L  *  K  I  K  K  F  Y  D  F  S  E  Q  F  F  F  *  F  L  R  I  I  V  R  I  R  *  *  G  L  F  H  R  H  D  F  G  S  G  *  A  P  E  S  G  S  *  E  Q  L  V  *  R  V  I  G  F  H  V  R  V  Q  E  D  E  E  E  E  T  L  L  S  G  K  S  N  C  R  V  G  S  I  G  D  R  F  C  R  D  E  L  V  D  A  F  P  D  P  E  L  G  S  G  F  S  G  *  V  Q  V  L  G  R  *  F  L  H  S  I  N  S   : G  R  T  A  K  A  W  A  W  R  R  E  K  A  S  E  N  N  L  R  T  I  A  G  *  S  C  S  F  L  S  *   : G  T  E  K  I  R  A  K  R  F  V  G  *  T  V  F  C  C  F  L  L  E  T  L  C  *  A  A  S  M  A  T  *  * :   G  K  K  W  L  H  Y  C  H  C  K  W  W  D  K  S  A  A  S  S   : C  L  Q  Y  C  C  Y  C  K  I  T  R  C  N  L  G  S  S  E  I  S  V  Q  *  C  L  E  R  C  E  :  P  V  W  R  D  L  P  G  G  A  F  H  *  L  P  E  T  *  Y  S  Y  S  *  R  T  S  S  G  V  A  V  I  R  S  R  G  H  W  Q  F   : G  D  R  C  R  C  C  K  R  S  K  A  R  F  L  Q  E  I  Y  S  S  Y  F  T  *  K  R  S  C  S  F  S  W  I  W  E  S  I  G  I  *  P  V  T  T  S  G  A   : E  T  S  M  Q  M  *  F  S  C  S  E  I  C </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0320D04.2" strand="+"/>
                <serials PGL_serial="19" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="152022" stop="152372"/>
                    <exon start="152784" stop="152879"/>
                    <exon start="152960" stop="153059"/>
                    <exon start="153145" stop="153206"/>
                    <exon start="153352" stop="153440"/>
                    <exon start="154193" stop="154313"/>
                    <exon start="154395" stop="154538"/>
                    <exon start="154660" stop="154698"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1002</number_coding_nucleotides>
                  <number_encoded_amino_acids>334</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KNSMTSRSNSFSNFSESSYEYDDKDCSTVTTSDRDEPLNPGHRNNSFNGLLGFTFGSKKMRKKKPFCQEKAIVGLALLVIGFVGMNWWMLSRIQNSGRASQVEFRFLEDNSSTLSIREELLRLGLGEERKPQKTIYARLLAKAAHSLAEGQKKSEPKDLWAEPYFVASSWKPCAEQRQWLPSEGKNGYIIVTANGGINQQRVAVCNIVAIARLLDATLVLPKFLYSSVWKDVSQFGEIYQEEHFIDYLKPDIRIVRELPQELQSLDLEAIGSLVTDADVVKEAKPGFYKKYILPILHKNGVVHFLGFGNRLASDPLPPQVQRLRCRCNFHALKF</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="154282" e_stop="154313"/>
            <exon e_start="154395" e_stop="154994"/>
            <exon e_start="155702" e_stop="155890"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.985" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.929" e_score="1.000"/>
          <exon-only e_score="0.984"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="154282" e_stop="154313" e_length="32"/>
          </exon>
          <intron i_serial="1" don_prob="0.985" acc_prob="0.991">
            <gDNA_intron_boundary i_start="154314" i_stop="154394" i_length="81"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="154395" e_stop="154994" e_length="600"/>
          </exon>
          <intron i_serial="2" don_prob="0.991" acc_prob="0.929">
            <gDNA_intron_boundary i_start="154995" i_stop="155701" i_length="707"/>
          </intron>
          <exon e_serial="3" e_score="0.984">
            <gDNA_exon_boundary e_start="155702" e_stop="155890" e_length="189"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="154282" stop="154313"/>
              <exon start="154395" stop="154764"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E206785" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="154659" stop="154994"/>
              <exon start="155702" stop="155890"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E468241" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="19" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGTCATTAGATCTAGAGGCCATTGGCAGTTTG : GTGACAGATGCAGATGTTGTAAAAGAAGCAAAGCCAGGTTTCTACAAGAAATATATTCTTCCTATTTTACATAAAAACGGAGTTGTTCATTTTCTTGGATTTGGGAATCGATTGGCATCTGACCCGTTACCACCTCAGGTGCAGGTAAACCCATCGAACTTGATATTAGGCTTCCTTGTTGATTTCTCAATTTTTCATATTATCTTCTCATTTAGTCTGATTCCATAATTTCTACCTTGGTTCCTGATTTGGGGACTTCATCTAGAGACTTCGATGCAGATGTAATTTTCATGCTCTGAAATTTGTTCCAAAGATAGAAGAAACTGGAGCTTTACTTATACGGAGAATGCGTCAGAATGTTACACGCTTGGGACCCTTGGATCGTCACCTAGTGGGTCCCTTCTCAAAGTCTATGCTGAAGGGTGAACATAATCGTGGAGAAAAAGTAGCTAGATATTTAGCTTTGCATCTGAGGTTTGAAATTGATATGGTGGCTCATTCCCTCTGTGAATATGGTGGGGGTGAAGAAGAAAGAAATGAACTGGAATTATATCGTGAAATCCACTTCCCTGCATTAGTGGAACTCAAGAAGACCACAAA : GTTGCCTTCCCCAGCAACTCTAAAGGCTGAAGGATTGTGTCCTTTAATGCCTGAAGAGACAGTGCTAATGCTTGCTGCCCTTGGTTTTAATCGGCAGACACGCATATACTTGGCAGGTGCACATATCTATGGAGGCAAATCAAGATTGGCCTCCTTGACCACCTTGTATCCTAATCTGGTCACAAAGGA</gDNA_template>
            <first_frame> S  H  *  I  *  R  P  L  A  V  W :   *  Q  M  Q  M  L  *  K  K  Q  S  Q  V  S  T  R  N  I  F  F  L  F  Y  I  K  T  E  L  F  I  F  L  D  L  G  I  D  W  H  L  T  R  Y  H  L  R  C  R  *  T  H  R  T  *  Y  *  A  S  L  L  I  S  Q  F  F  I  L  S  S  H  L  V  *  F  H  N  F  Y  L  G  S  *  F  G  D  F  I  *  R  L  R  C  R  C  N  F  H  A  L  K  F  V  P  K  I  E  E  T  G  A  L  L  I  R  R  M  R  Q  N  V  T  R  L  G  P  L  D  R  H  L  V  G  P  F  S  K  S  M  L  K  G  E  H  N  R  G  E  K  V  A  R  Y  L  A  L  H  L  R  F  E  I  D  M  V  A  H  S  L  C  E  Y  G  G  G  E  E  E  R  N  E  L  E  L  Y  R  E  I  H  F  P  A  L  V  E  L  K  K  T  T  K :   L  P  S  P  A  T  L  K  A  E  G  L  C  P  L  M  P  E  E  T  V  L  M  L  A  A  L  G  F  N  R  Q  T  R  I  Y  L  A  G  A  H  I  Y  G  G  K  S  R  L  A  S  L  T  T  L  Y  P  N  L  V  T  K   </first_frame>
            <second_frame>  V  I  R  S  R  G  H  W  Q  F   : G  D  R  C  R  C  C  K  R  S  K  A  R  F  L  Q  E  I  Y  S  S  Y  F  T  *  K  R  S  C  S  F  S  W  I  W  E  S  I  G  I  *  P  V  T  T  S  G  A  G  K  P  I  E  L  D  I  R  L  P  C  *  F  L  N  F  S  Y  Y  L  L  I  *  S  D  S  I  I  S  T  L  V  P  D  L  G  T  S  S  R  D  F  D  A  D  V  I  F  M  L  *  N  L  F  Q  R  *  K  K  L  E  L  Y  L  Y  G  E  C  V  R  M  L  H  A  W  D  P  W  I  V  T  *  W  V  P  S  Q  S  L  C  *  R  V  N  I  I  V  E  K  K  *  L  D  I  *  L  C  I  *  G  L  K  L  I  W  W  L  I  P  S  V  N  M  V  G  V  K  K  K  E  M  N  W  N  Y  I  V  K  S  T  S  L  H  *  W  N  S  R  R  P  Q   : S  C  L  P  Q  Q  L  *  R  L  K  D  C  V  L  *  C  L  K  R  Q  C  *  C  L  L  P  L  V  L  I  G  R  H  A  Y  T  W  Q  V  H  I  S  M  E  A  N  Q  D  W  P  P  *  P  P  C  I  L  I  W  S  Q  R  </second_frame>
            <third_frame>   S  L  D  L  E  A  I  G  S  L  :  V  T  D  A  D  V  V  K  E  A  K  P  G  F  Y  K  K  Y  I  L  P  I  L  H  K  N  G  V  V  H  F  L  G  F  G  N  R  L  A  S  D  P  L  P  P  Q  V  Q  V  N  P  S  N  L  I  L  G  F  L  V  D  F  S  I  F  H  I  I  F  S  F  S  L  I  P  *  F  L  P  W  F  L  I  W  G  L  H  L  E  T  S  M  Q  M  *  F  S  C  S  E  I  C  S  K  D  R  R  N  W  S  F  T  Y  T  E  N  A  S  E  C  Y  T  L  G  T  L  G  S  S  P  S  G  S  L  L  K  V  Y  A  E  G  *  T  *  S  W  R  K  S  S  *  I  F  S  F  A  S  E  V  *  N  *  Y  G  G  S  F  P  L  *  I  W  W  G  *  R  R  K  K  *  T  G  I  I  S  *  N  P  L  P  C  I  S  G  T  Q  E  D  H  K  :  V  A  F  P  S  N  S  K  G  *  R  I  V  S  F  N  A  *  R  D  S  A  N  A  C  C  P  W  F  *  S  A  D  T  H  I  L  G  R  C  T  Y  L  W  R  Q  I  K  I  G  L  L  D  H  L  V  S  *  S  G  H  K  G </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0320D04.2" strand="+"/>
                <serials PGL_serial="19" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="154660" stop="154994"/>
                    <exon start="155702" stop="155888"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>522</number_coding_nucleotides>
                  <number_encoded_amino_acids>174</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RLRCRCNFHALKFVPKIEETGALLIRRMRQNVTRLGPLDRHLVGPFSKSMLKGEHNRGEKVARYLALHLRFEIDMVAHSLCEYGGGEEERNELELYREIHFPALVELKKTTKLPSPATLKAEGLCPLMPEETVLMLAALGFNRQTRIYLAGAHIYGGKSRLASLTTLYPNLVTK</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0320D04.2" strand="+"/>
                <serials PGL_serial="19" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="154284" stop="154313"/>
                    <exon start="154395" stop="154622"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>255</number_coding_nucleotides>
                  <number_encoded_amino_acids>85</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SLDLEAIGSLVTDADVVKEAKPGFYKKYILPILHKNGVVHFLGFGNRLASDPLPPQVQVNPSNLILGFLVDFSIFHIIFSFSLIP*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="153495" e_stop="154269"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.911"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.911">
            <gDNA_exon_boundary e_start="153495" e_stop="154269" e_length="775"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="153495" stop="154269"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E434041" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="153495" stop="153974"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E404492" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="19" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTACAATAGGGATTGCAAAATAATATAGCAAAACTGTCATAATAGTGGGATCTTTGATTACAGATTCACAACATCTTTGATATACTATTTTGTAACTTCACTTGCGAATTCTTGTTGTTGACTGGAAACACGTACTAGTTGAATAGTATTTCATTTAATTCTTTTCCATGTTCTTTCCATAACTAATTAAACAACTAAACTGTCTTAGTCTTGAAATTCTTTAACTCAATAATTGGGAATTTGTGATGTAACACTGATTTCTCTTTGGTCGCTTGTCTACACAACATTAGCTCTCCAATACTTTGTGATTAAACCAAAGGTTCGCCTGGCTTTTCTTTGTTGAATCTACTTTAGAGATGCAAGTATGTGATAGTTCTTTTCCTGAACTCTTCCCCAATGTGCTTTGAGCTATATAAGTATCTCCATATGCGTTTTTAACTGCTGTTGAACCTCCCTTGCATTTGCAACTAGCTATGCCCCGTCCAAAAAAAATTATATGTTATCTTGGAAGTGTTTGCATCAGTAACTTTTAGTATGATCTTCATCAAATAGAAATTAGAACTTTAAATAAGATATTTATGTGCCTTCCCGATTTTGCTTCCTTCGAACTTGTTTCCTTTTCTTGCTAATCTAAAACATTTGATACCTTATGAGTTCCTTATATTGAAGATTGATAGATGTAACTTATAATTTCTTAGCCAGTTTGGCGAGATCTACCAGGAGGAGCATTTCATTGACTACCTGAAACCTGATATTCGTATAGTTAGAGAACTTC</gDNA_template>
            <first_frame> V  Q  *  G  L  Q  N  N  I  A  K  L  S  *  *  W  D  L  *  L  Q  I  H  N  I  F  D  I  L  F  C  N  F  T  C  E  F  L  L  L  T  G  N  T  Y  *  L  N  S  I  S  F  N  S  F  P  C  S  F  H  N  *  L  N  N  *  T  V  L  V  L  K  F  F  N  S  I  I  G  N  L  *  C  N  T  D  F  S  L  V  A  C  L  H  N  I  S  S  P  I  L  C  D  *  T  K  G  S  P  G  F  S  L  L  N  L  L  *  R  C  K  Y  V  I  V  L  F  L  N  S  S  P  M  C  F  E  L  Y  K  Y  L  H  M  R  F  *  L  L  L  N  L  P  C  I  C  N  *  L  C  P  V  Q  K  K  L  Y  V  I  L  E  V  F  A  S  V  T  F  S  M  I  F  I  K  *  K  L  E  L  *  I  R  Y  L  C  A  F  P  I  L  L  P  S  N  L  F  P  F  L  A  N  L  K  H  L  I  P  Y  E  F  L  I  L  K  I  D  R  C  N  L  *  F  L  S  Q  F  G  E  I  Y  Q  E  E  H  F  I  D  Y  L  K  P  D  I  R  I  V  R  E  L  </first_frame>
            <second_frame>  Y  N  R  D  C  K  I  I  *  Q  N  C  H  N  S  G  I  F  D  Y  R  F  T  T  S  L  I  Y  Y  F  V  T  S  L  A  N  S  C  C  *  L  E  T  R  T  S  *  I  V  F  H  L  I  L  F  H  V  L  S  I  T  N  *  T  T  K  L  S  *  S  *  N  S  L  T  Q  *  L  G  I  C  D  V  T  L  I  S  L  W  S  L  V  Y  T  T  L  A  L  Q  Y  F  V  I  K  P  K  V  R  L  A  F  L  C  *  I  Y  F  R  D  A  S  M  *  *  F  F  S  *  T  L  P  Q  C  A  L  S  Y  I  S  I  S  I  C  V  F  N  C  C  *  T  S  L  A  F  A  T  S  Y  A  P  S  K  K  N  Y  M  L  S  W  K  C  L  H  Q  *  L  L  V  *  S  S  S  N  R  N  *  N  F  K  *  D  I  Y  V  P  S  R  F  C  F  L  R  T  C  F  L  F  L  L  I  *  N  I  *  Y  L  M  S  S  L  Y  *  R  L  I  D  V  T  Y  N  F  L  A  S  L  A  R  S  T  R  R  S  I  S  L  T  T  *  N  L  I  F  V  *  L  E  N  F </second_frame>
            <third_frame>   T  I  G  I  A  K  *  Y  S  K  T  V  I  I  V  G  S  L  I  T  D  S  Q  H  L  *  Y  T  I  L  *  L  H  L  R  I  L  V  V  D  W  K  H  V  L  V  E  *  Y  F  I  *  F  F  S  M  F  F  P  *  L  I  K  Q  L  N  C  L  S  L  E  I  L  *  L  N  N  W  E  F  V  M  *  H  *  F  L  F  G  R  L  S  T  Q  H  *  L  S  N  T  L  *  L  N  Q  R  F  A  W  L  F  F  V  E  S  T  L  E  M  Q  V  C  D  S  S  F  P  E  L  F  P  N  V  L  *  A  I  *  V  S  P  Y  A  F  L  T  A  V  E  P  P  L  H  L  Q  L  A  M  P  R  P  K  K  I  I  C  Y  L  G  S  V  C  I  S  N  F  *  Y  D  L  H  Q  I  E  I  R  T  L  N  K  I  F  M  C  L  P  D  F  A  S  F  E  L  V  S  F  S  C  *  S  K  T  F  D  T  L  *  V  P  Y  I  E  D  *  *  M  *  L  I  I  S  *  P  V  W  R  D  L  P  G  G  A  F  H  *  L  P  E  T  *  Y  S  Y  S  *  R  T   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0320D04.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="20" PGL_strand="-" PGL_start="155275" PGL_stop="154556"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="155275" e_stop="154556"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.944"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.944">
            <gDNA_exon_boundary e_start="155275" e_stop="154556" e_length="720"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="155275" stop="154556"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E434042" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="20" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TGTTTTCCTAGATATATACAAATGCTTTTGGAACAATTTTTTTTGTTTACTTATTAAACAGCAGAAAATATGTAAGAAAACCACTTATTTCCATGGAAACATTTTTCTTCAAATCAAACAGGCCCTTAGTTCAATATGTTTGTGTGTGTGTGTCTGGTGCACTCTCTGGATAATCAAAGATGCAAGCACCAGTCTAGGAAAATCAAACAAGTCAGCCTAGCTTTTTCTTATGAGTTGTGCATCAAGTAAAAGGAATTGAGCAATGATTACATATAACATACTTTGTGGTCTTCTTGAGTTCCACTAATGCAGGGAAGTGGATTTCACGATATAATTCCAGTTCATTTCTTTCTTCTTCACCCCCACCATATTCACAGAGGGAATGAGCCACCATATCAATTTCAAACCTCAGATGCAAAGCTAAATATCTAGCTACTTTTTCTCCACGATTATGTTCACCCTTCAGCATAGACTTTGAGAAGGGACCCACTAGGTGACGATCCAAGGGTCCCAAGCGTGTAACATTCTGACGCATTCTCCGTATAAGTAAAGCTCCAGTTTCTTCTATCTTTGGAACAAATTTCAGAGCATGAAAATTACATCTGCATCGAAGTCTCTAGATGAAGTCCCCAAATCAGGAACCAAGGTAGAAATTATGGAATCAGACTAAATGAGAAGATAATATGAAAAATTGAGAAATCAACAAGGAAGCCTAATATC</gDNA_template>
            <first_frame> C  F  P  R  Y  I  Q  M  L  L  E  Q  F  F  L  F  T  Y  *  T  A  E  N  M  *  E  N  H  L  F  P  W  K  H  F  S  S  N  Q  T  G  P  *  F  N  M  F  V  C  V  C  L  V  H  S  L  D  N  Q  R  C  K  H  Q  S  R  K  I  K  Q  V  S  L  A  F  S  Y  E  L  C  I  K  *  K  E  L  S  N  D  Y  I  *  H  T  L  W  S  S  *  V  P  L  M  Q  G  S  G  F  H  D  I  I  P  V  H  F  F  L  L  H  P  H  H  I  H  R  G  N  E  P  P  Y  Q  F  Q  T  S  D  A  K  L  N  I  *  L  L  F  L  H  D  Y  V  H  P  S  A  *  T  L  R  R  D  P  L  G  D  D  P  R  V  P  S  V  *  H  S  D  A  F  S  V  *  V  K  L  Q  F  L  L  S  L  E  Q  I  S  E  H  E  N  Y  I  C  I  E  V  S  R  *  S  P  Q  I  R  N  Q  G  R  N  Y  G  I  R  L  N  E  K  I  I  *  K  I  E  K  S  T  R  K  P  N  I </first_frame>
            <second_frame>  V  F  L  D  I  Y  K  C  F  W  N  N  F  F  C  L  L  I  K  Q  Q  K  I  C  K  K  T  T  Y  F  H  G  N  I  F  L  Q  I  K  Q  A  L  S  S  I  C  L  C  V  C  V  W  C  T  L  W  I  I  K  D  A  S  T  S  L  G  K  S  N  K  S  A  *  L  F  L  M  S  C  A  S  S  K  R  N  *  A  M  I  T  Y  N  I  L  C  G  L  L  E  F  H  *  C  R  E  V  D  F  T  I  *  F  Q  F  I  S  F  F  F  T  P  T  I  F  T  E  G  M  S  H  H  I  N  F  K  P  Q  M  Q  S  *  I  S  S  Y  F  F  S  T  I  M  F  T  L  Q  H  R  L  *  E  G  T  H  *  V  T  I  Q  G  S  Q  A  C  N  I  L  T  H  S  P  Y  K  *  S  S  S  F  F  Y  L  W  N  K  F  Q  S  M  K  I  T  S  A  S  K  S  L  D  E  V  P  K  S  G  T  K  V  E  I  M  E  S  D  *  M  R  R  *  Y  E  K  L  R  N  Q  Q  G  S  L  I   </second_frame>
            <third_frame>   F  S  *  I  Y  T  N  A  F  G  T  I  F  F  V  Y  L  L  N  S  R  K  Y  V  R  K  P  L  I  S  M  E  T  F  F  F  K  S  N  R  P  L  V  Q  Y  V  C  V  C  V  S  G  A  L  S  G  *  S  K  M  Q  A  P  V  *  E  N  Q  T  S  Q  P  S  F  F  L  *  V  V  H  Q  V  K  G  I  E  Q  *  L  H  I  T  Y  F  V  V  F  L  S  S  T  N  A  G  K  W  I  S  R  Y  N  S  S  S  F  L  S  S  S  P  P  P  Y  S  Q  R  E  *  A  T  I  S  I  S  N  L  R  C  K  A  K  Y  L  A  T  F  S  P  R  L  C  S  P  F  S  I  D  F  E  K  G  P  T  R  *  R  S  K  G  P  K  R  V  T  F  *  R  I  L  R  I  S  K  A  P  V  S  S  I  F  G  T  N  F  R  A  *  K  L  H  L  H  R  S  L  *  M  K  S  P  N  Q  E  P  R  *  K  L  W  N  Q  T  K  *  E  D  N  M  K  N  *  E  I  N  K  E  A  *  Y  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0320D04.2" strand="-"/>
                <serials PGL_serial="20" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="155274" stop="155056"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>216</number_coding_nucleotides>
                  <number_encoded_amino_acids>72</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VFLDIYKCFWNNFFCLLIKQQKICKKTTYFHGNIFLQIKQALSSICLCVCVWCTLWIIKDASTSLGKSNKSA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 192 chains have been computed
$ 
$ memory statistics:
$ 481648 bytes spliced alignments in total
$ 132 spliced alignments have been stored
$ 3648 bytes was the average size of a spliced alignment
$ 33408 bytes predicted gene locations in total
$ 20 predicted gene locations have been stored
$ 1670 bytes was the average size of a predicted gene location
$ 1 megabytes was the average size of the backtrace matrix
$ 215 backtrace matrices have been allocated
$ 
$ date finished: 2009-12-01 10:30:17
-->
