<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-12-01 10:39:24"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C02SLe0002K14-GUpky/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C02SLe0002K14-GUpky/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0002K14-GUpky/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E318424" ref_strand="+" ref_description="SGN-E318424 [cTOB-10-C14]">
      <seq>agaagccttcactaagccaaaagaaaatggcgggcttctctatgatgctttggcaagacctacaaagctttgattgtttaggtgtgtaaagaagacaacccatttgcccaaaaggagaataaattagcatgtgagctgaagtttctgaagaaaatggcttcgcttgcctttataaccctctttcccattggcaatttcaagatatttactacagntgtcttcttctcttcatttaatgagatatcagtgatgcctcatcagaaccacggacaaaatgggcagcagggtatgtggatgtaccaatgcatccattgtaaaaaaaacttcccttcaagccaggccatagcaggccatacaaagggtcatttcagagatggctgggttaaaggaaccccccagagcaaagtatttgtactattttctgagtatcagcaacagcagggttctatcactgactcttcaattcccgagaaacagattttttctgcagcaacttctgacactgacttagcagatgctcatcaattgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0002K14-GUpky/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0002K14.1" temp_strand="+" temp_description="C02SLe0002K14.1  AC215442.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0002K14 sequenced_by:kribb upload_account_name:korea">
        <position start="8591" stop="17930"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="8891" g_stop="8957" g_length="67"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="67" r_length="67" r_score="0.985"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="8958" i_stop="9066" i_length="109">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="9067" g_stop="9200" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="68" r_stop="201" r_length="134" r_score="0.985"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="9201" i_stop="16620" i_length="7420">
            <donor d_prob="0.965" d_score="0.96"/>
            <acceptor a_prob="0.532" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="16621" g_stop="16686" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="202" r_stop="267" r_length="66" r_score="0.970"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="16687" i_stop="17368" i_length="682">
            <donor d_prob="0.856" d_score="0.98"/>
            <acceptor a_prob="0.936" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="17369" g_stop="17630" g_length="262"/>
          <reference_exon_boundary r_type="cDNA" r_start="268" r_stop="529" r_length="262" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0002K14.1" gen_strand="+" ref_id="SGN-E318424" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>529</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0002K14.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E318424" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="8891" e_stop="8957"/>
          <exon e_start="9067" e_stop="9200"/>
          <exon e_start="16621" e_stop="16686"/>
          <exon e_start="17369" e_stop="17630"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAGCCTTCACTAAGCCAAAAGAAAATGGCGGTCTTCTCTATGATGCTTTGGCAAGACCTACAAAGGTAACGTATCCCTAATAAAACAGCAAAAAAATGCATTTTGTTTCTGTTATGCACAATTTCAGTTCTTAGTTTTCTCACTTCCTTTGTAATTTTTTGGGTATATAAGCAGCTTTGATTGTTTAGGTGTGTAAAGAAGACAACCCATTTGCCCAAAAGGAGAATAAATTAGCATGTGAGCTGAAGTTTCTGAAGAAATTGGCTTCGCTTGCCTTTATAACCCTCTTTCCCATTGTCAATTTCAAGGTAAAAGTACTGATAATTGGACTACTAATCTACATAATTGAAGAAAAAAAGGGGAAAAATGGTTCTTTTTTTTTTTTTTTGATTGCACTGAGATATACTGCTAAATCTTTATGTAATTGAGAATCTAGATTGTTGGGTATATAAGTATTGAATGCTAGCATGAAAATTCATGTTACTGTGATTCATTACTGGGTATCCATTTGGTTTGCTATATGTGGAGATTTTACTCTTCTTTTAGAATTATACATTATTTCAAGGATGTGAGGTTCTTACTTTAATTTTCCTCATGATTTATACCTGTATAAGTTAGAGGGAAGGAACTATGTATTATTTTATACAAGATTTTTTTAGAAAAAGATTTCATTTTTTGGAAAGACAGTGGTTGCAAGCAATCTATTAGGACCTTTGACCCTTTCTGGTAGATGATCAACATTGTGTACACCAGGATGGTCTTCCAAAGAAAAAGCTCACTTTGCTAGATTGTCTACGACCTAATTGGGTTCCTGATATCAATGAGTAAAGTTGCCTTTACGTGATCCACCAGGACAAAGATATCCTTAGTAATTGGATTGAGAGTGAGATTGCTAGTTTTCTTGCTCCTCAACGTATCTACCATAATCATAGAGTCAACATCAATAGTGTCCTGCCTCAAGCCATTGTCTTTCAAATTGCCCGGCATATTTGGCTGCTATGGCTTCGGCCGCATGATGATTGTTGCACTGTATTGGGAATTCCATCTTGCAGTTAGGAAAAGTTTTATCCACTAGATACTTTGAGGTACCACATAATATGCTGCTCCGTTCTCCGTGTAGAATCTGTTCTGGTTGCAGATCTACCAGCACATCTGCTTCTTCAATAGTTGCATTTTGGGCTCCCATATATAAGCTTGAAAATGAACATCTCCAATTTTCTCTCTAGACCATTGAGATAATCTCTGTCCCAGTTCTTTGAGCTTCTGTTGTAATCTCCACGTAGGATTACCCTCAATTTCTTGATCATTCAATACTCACTATCTCTTGGAAATCAGGTTGTGTTATCTAGAAATCCAGGAATTTGAAATACTTCATTCCAGTAGTTTGCTCATTATCACATTTCAGCAGCATGGGCTTATGATCAGAGCCAGCCCTGGGCAAGTGCCTCACAGTCTTGAAGTGGTCATCAGTGTTATTAAAGCAAAAATCACAAAAATCTCAAAGGATGGTGGTGCTTCAAGTGCAAATAAAATATGGACTTAGTGAAAATAGGCGCAAAGGGAGAAAAAGATACAAGTATATCACATATATCTAGTTCAAAACTAACAATTATAAGCATGAATGACAAATATATGAGCAATGAGATTGGAAAAAATTATGATAAAGTGAAATATCAATTGTTTAGTGTCACCTCTGTAGAAGATGTGCATTGAAAAGGGTTTCAGACCAATCAGATCAATTTGAGGGGTGTACATGACCATTTCTAAGCTGATCACTGAAAGATTGAAAATGGTTATAGGGAAGCTGGTTGGGATCAAATGGCATTCTTGAAAGGAAGATGAATCATGAATGCTGCTCTTCTGGCTAATGAAATGGTCGACTCTAGGGTAAAACAGAAGAAACCATGCATCATATACTAGCTAGATATTCAATAGGCTTATGATCATGTTAATTGGAATTTCTTGCTAAAAATTTTGATAGACATGGGCTTTGGAGAGAAATGGAATTGCTGGATACAGTTTTGCATCTCGAATGTAAGGTTCTCACTCATTATAAATGGTAAACCGGTTGGATTTTTTCAATCCCATAGAGGTCTTAGACAAGGAGACCCTATGTCGCCTTTTTTGTTCCTACTTACTATGGAGGGTCTGCACCACATGTTCAAGGTAAATAGTTGGGTAAAAGGATTCAATGCTCATATAGGGAGAGGTGAAGATCTTGAAATCAAACATCTTTTTTATGCAGATGATGCTCGGGTTTTTGTGAAGCAAAAGTGGACCAATTAGACACTTAAGAGCAATCCTTACAATATTTGAGGGCATTTTCAGGACTTTATGTTAACTAGTCGAAAAGTTTTCTCTTCCCAATTTATCAGGTAGACAATTAACAAAGTCTAGCTGAGAATCTGGGATGTCAGATAGCCTCTCGGCTTACAAAGTACCTAGGATTGTCTCTGGGGGGCCATGAACAAGGAGTTGGAGGCATGGAATCGAGGTGATGGAGAGATGTGTGAAAAGGCTATCAAGATGAAATAGTCAATACTTCCACTACGGGGTAGGTTGACTGTCATCAAGTCAGTTTTAGATGGGCAACCTATCTACATAATGAGCCTATTTCCAATACCCAAGAACACTATGAAGAGAATCAACAAAATGAGAAGATCCTTCATTTGGCAAGGAACAAAGAATAGAGAGGCTACAACCTGGTGAAATGGGAGATACTCACTTTGAGCAGAAAACAATGTGGCCTTGGCATGAGAAATCTTTGCATCCAGAATAAATGCTTGCTGTAAAAATGGCTATGGAGATTTTGTACGGGAGATAGAGCCCTATGGAGAAAATTCGCAGCAGAAAAATATGGCTTGTTTAGCAAATGGACTACTGAGAAGGTGAAGGGGTCGTTTCAATGCTGTGGGTGGAAGTCCGTTAAGAAGGCTGTGGCCACAGTTTAATAACAATATCTATACTAATGTGGGAAATGGTCTGAAAACATATTTCTGAAATGAAATCTGGAAAGGGTATGATAGCCCAATGAACTTATTCCCAAACCTCTACACCCTGAGCTTACAAAGATTTGCTACTGTTGCTCAAGTATGGAGCCAACAAGAGTAGAACTTAGTGTTCAGGAGGGCTTCTGAATGGATGGGATGTGGGCGGGCTACTTGAGGTTCTTAACACCCCACCAGCCATGTCTCAAAGAAAGGATAAACGAATTTGGAAGCTACATAACATAGGAATGTCATAGTTAAATCTTGCTAAATCTTGCTACTGGTAATGAATGTTAATCAGTCGATACTAACAAGTGGCCTTGGAAGCTAGTGTGGAAGACGAGAAACCCATTAAAAGTAGCATGTTTTGCGTGGTTGGTCATAAGAAAAGTTTGCCTTACCCATGAGGCATTACAAAAAAGGGGATGCAGTTTTTTTTTTTGAAACTGAAAAGGGGGGGGGGGGATGCAGTTTTGCTCAAGATGCTTATGTGTGAGTAGAAAGCTGAAGTAAATAATCATTTGTTCATTCATGGTATAGCAGCTTCAAAATTGTGGAATATGTGGAGAGAGGTGATTAGGGCAAAATTTGAAATGGAGAAAAGGTGGATGACAAAGATGGTAACTACACCATATGAATATGGTATCTGGAGATCAGTAAGAAATCTTTGGGCTCGTTTCGTTCTAGAATCAGATTCCAGTTGGGTAATGGAATGAAGGTGTCATTTTGGGAGGACAAATGGATAGCCCAAAGAATCCTGAAACTATTATTCCCGGACTTATGTACACTGAGCTTGCAACAAATGCAACTCTGGCTGAAATGTGGACAGGACAGGGGTGGAACTTACATCTTAGGAAGAATTTAAATGATTGGGAGATGGGGAACATTGTGACCTTCCATGATACAATGGCACAATTTAGTACTCTGAGTAGGGAAGAAGACAAGGTTGTGTGGAAATCGACAGCAAAGGGGTCTTCAGTGTCAAGTCAGCTTACAAAGATCTCCATCATTCAAATTCAAATGACAGGATGGAGCTCTGGCCATGGCAGATGATAAAATCCCATACAAGGTAAACTGCTTCACATGGTTACTAGCAAAGGAAGCAGTGCTGTCACAAGAAAATATAAAGAAGAGGAAGTTCCAACTATGTTCAAGATTCTATTGTGTGAGGAACAGGCAGAGATAGTTGACCATCTCTTTCTGCATTGCAAATGGACAAATCAATTATGGAGAATATTCAGCAGCCTTAGGAAGATCACTTGGGTGAAACCAAGAAAAATAGCACAACTCCTAAATTGTTGGATCAATATAGGCAACACTACAATTAAGGAGGAGAGATGGAGGATTGTCCCAGCTTGTATATGGTGGACAGTGTGGAAAGAAAGGAATCAAAGAAGTTTTGAGGGCAAGAAGAACAATTTGCAGAATTTTAAGATGAATTGTATAGCTCTTTATTGTTTTTGGTGTAAACAGAAAGTTTTAGTACAGTCAGAAGAACTTTTTGATGTTATAGATTATTTGTGACAAAAAGAACAGATGGAGTCAGTCTAGTTTGTAATACTTTTGGAGGGGGGCTACTTTGATGTAGTATACCTGTGGATAAATAGGAAAAAAAGGTTATCATTCTCAAAAAAAAGTATACTAGGGGTTAGCTGGGTGATGCCAAGGACAACCATTGAGCTCTTTAATAGCCGGACAAGAATTGGCAGCAGAGGGAAAAGTGAAGACTGGTGGACGACTATCCCCCTGAATATTGGGGACCCTATGGTAAAAGAAAGGAATGCTAGGTGTTTTAAAGGACAAAATGATAGTTTTGATTTCTCTGAATATATGGACTCTTGTGGCGTGGTTGATATTGGGTAAACAGGTCCTAAATACAGAAGGTGCAACAACTGGACATCTAGCAAAAGGATATGGAAAAGGCTGAACAGAGTATTCATTAATAGCTTATGGGCTCAGAATTCAATCAGCGTCATCGAAGGTGCGCTAAGCACGCTTAGGCCCTGAAGCCGTCTTTGTTGGAACCATCCGTCCGTAGCTGATCATTTTTATCCGCACATTTGTTGTCATCAGCCATCCTTTTTTCCTTAGTACAATTTATCTAAGCTTGATCAGCAACTATAGCATTCTTTCCAGTAGGAACCCTCTTCTCTGCCCTCTTCTGTTCTAATTCTCTACGTTGAGTTATTGAGTGCCCCAAGATTTTGCAATTTCTACAAAATTTAGTTACTATAGGAGAGTCCTCATTGGTACTGCAATTTATTTTACGCAATTCCATCCGTGACAGTGGAATGGAGTTCCAGCAAAAGCACCCAGATAGGGACTACAGGAGATTCCTCATCTGATCTGAATGGTGGAGTGCATTTCTCTAGCCACATCACTTGACCGTCTATTTGAATAGATCGGTTATACCAAACATTTTTTAAATCTTCCTCATTGGAAAAATCTATAAACATAACGCAAAAATCGTAAACTCAAATCTTAACTTCACCTCTGATAAATTTGTGGCCTAGTCATGAATTTACCCACCAGAGTTAGTTTCACTCTTCAGCAGTAATTCCATAGTAATCGCTTGATTTGAAAATGATTGTCGGCATGCAATTGTTAGTATCATAACCAGCTTTCACTTGTGGATTCCCAAGTCGCTGGTTTCTAGGCTTGGGATAGCACTTAACGGTCGATTGAATTGCTTCAGAATGTTAGATTTCTGTGGAATTTCCTCCACAGCTAAGGTCACCATAGTAGTATCAATGTTTTTATCTACCAGTGGCGCCGTGCCAGGTCTACTGGTGTCCCATTGGACGGAGTGTGAGGCTCAATCACGAGAGAAAACAACCGTTGAGAAATAATACTCATGTATTGTATGGAAAACTTTTTCTGTTTACTTATTTTTATACGGCATAGAATGTGAAATAAGAACAAGGGTAAGTCATACATGGATAAATAAACTAAAGGTGAAGTGACCCTTATGATAGTAAAGAAACTTTTATTTTGGTTAACAAGTAACATATATTTCTCTCTCTGTCGAATACTCAGTTGACTCATACTAGTCTCATACAATAATGTTAAGTAAAGTGTTTTTTATTGATACTTCTTCAGAGCAAAAAGAAAGTTGTCTCTGTCATGAGCAGATATGGGTAAATTCATGTGGAAACAAGTTTTCATCTGTCTGGCTTGGAAAATGATAAACATTTCAGGATCTCATCTTTTCCACGATCTTGGCCAGAGGACTTGGAATTAAATTATTCTGAAGAAGCCACATAAATGATACAATTGAACCTACTTTGTCTACTTCATGATTAGACACTATCTGAACTTTTTGTGCTACAACTAGAAGAGCTAATGGAGATTCTACATAGAAACTCAGTAAAAAACAAATTTTTGGCTGAGTTGTACATTTTACAAGGCATTAGTCTTTTTTTTCTAAAAAAGTTGTTATTTTCAGTTCTCCTGAAAAATATTTTCAATCAAACACCACTAGAAAGGAGTGTTTCACTTTACTCCTCTCTAATTGTGTATGGCTCGGGTTTTTGACAAGTAATGTTGAATTTAATAATGGATTCTAACAAGGAATCAACATCATTTACATAGGGGCCAAGTGGCATCAATTAGCTAACAGAAAATACATCTAAGTTTGAGGCTATGTATATTTCTCCTTTTGCCAAACTTTTGTTCGAGTTTTTAGAAATACAAAATAAGGAAGTTCATGATTTTTTTAGCTGTTTCCAATCTGTTGATCTCAGTTTTATTTACGGAATTGGATTACCTTTCCTTCTTTGCAAAATTCACTTGTTGGATCAAAGAGAGGAAATGATCATTTAAATTTCTGTTACCGTTTACTTCTCATTGCCTTAAAAGGGAATCTGTTCTCTAATTGCCATGAGTTATACTGCTAAATCTTCTGAAAATAGAATCTACATTATTGGAAAGAAATATTAAACGCTGGCATGAAAGCTCATCTTAGTGTAATTAATCACTTGATATTATAAGTGATTAAGGATTTATGCTTAGCTTTCATCCTGGATCGACAGCTAGTATTTTATAGTTGTGCATTGTTTCACTTCTCCTTCTGTAGGATACTCAGTTGGCTCATACTTCTCATAAAATAGTGTTCAGAAGATTATTTTCAGTTGATACTTGTCTCTTCGTGACAAAAAGTATGTCACCTTTGTCATGAGTATCATGGACTCTTGTTTAAACAAGTATTTATTTGTCTGCCTTGAGAACCTAGTTCTGTCATTATTTTCCTATCCATCTTGGATGTTATTAATAATTTGAGACAATTAGTGATATAGCTGGAATATTTCTTGTAACTGTCTTATCATTTTACTAGCCATTCTTGAAGTAGGTTACCATTGGGGACCAAAGGCAACACATGTACGTGGAATATCATTTACTTCAAGGGATAATACCAAAATAAAGGAAAATAAATGGAACCTACAAAGTTTCTATTTGACTCAACCATGATTTAATACATTTTCTCCTCTTTCATGCATAATTCTGGAAGTAATCTTTGAACGTTGTCTCTTTAACTAGCAGAGTAGTTTCACCACAGTTCTTTTCCTCTCTTTTTGTTATTTTGGTCCTTCTGTTTTGTCCTCATCATTTATGTTTGATGATTCTGTTAACTGAAGCCATGTAGTATTTGATCTAAATAGATTGAAATAATTCTACCATTGCTTTAAAAATTGCAAATAAACATTTCTCTTATCCTTCACTAACCCTTGTCTGTAATCTGCAGATATTTACTACAGTTGTCTTCTTCTCTTCATTTAATGAGATATCAGTGATGCCTCATCAGAACCAGGTATGATTGTCATCAGGGAATAGAGTGAATTGTGAAACAAATAGGAAATAATGCAATACTTGGGTAGAGTTTCAGTGAATATAATATCCCTTCTCTTATAAGGTAATTAGGGAATGAAAATCCTACATATGACAAGTAAGAAGAATCATTGGAAGGAATGAACAATATATGTCACATCCTAATTCTATTCTGTGATAAGGTTCCCTGGTTCATAAACTCTAAGCTGACTGGTCATATCTCTCTACCAAGAGAAAATAGGGAAAATACCATACTCTTAAGATTCTATAAACCCTTGATTGGTACATATACTTTTTAAGTTTGTAACTCTACCTGCTTTCTTAACCTAGTGATGGAGTTACCTAATGTGTTGAACCCCTGAAGGATCAAGGACCATAAATAGTTGGAACAAGTCATCATTGCCTTTTAAAAGCAAATATTTCAACTATTTATTTATTAGGACAAAATCAATTGAAAAAAAGAAACTTAAGAGTTCCATTATTTATGGTCAAATAGAAAAAGATAAAACCAAAATAACGGAGTTGCAATTGTGTACTCCTTGTTGTTATATCTTTAAGATGCAATGACTTTTTTTATGCCAACTCTGTTTTTAAAAATTACTTGGTTAGAGCTCCTTTATATGTATTCCTCTTCTTCGATTAACATGGAAGTAACAACAATACAGGGACAAAATGGGCAGCAGGGTATGTGGATGTACCAATGCATCCATTGTAAAAAAAACTTCCCTTCAAGCCAGGCCATAGCAGGCCATACAAAGGGTCATTTCAGAGATGGCTGGGTTAAAGGAACCCCCCAGAGCAAAGTATTTGTACTATTTTCTGAGTATCAGCAACAGCAGGGTTCTATCACTGACTCTTCAATTCCCGAGAAACAGATTTTTTCTGCAGCAACTTCTGACACTGACTTAGCAGATGCTCATCAATTGC</genome_strand>
        <mrna_strand>AGAAGCCTTCACTAAGCCAAAAGAAAATGGCGGGCTTCTCTATGATGCTTTGGCAAGACCTACAAAG.............................................................................................................CTTTGATTGTTTAGGTGTGTAAAGAAGACAACCCATTTGCCCAAAAGGAGAATAAATTAGCATGTGAGCTGAAGTTTCTGAAGAAAATGGCTTCGCTTGCCTTTATAACCCTCTTTCCCATTGGCAATTTCAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................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      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0002K14-GUpky/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E342979" ref_strand="+" ref_description="SGN-E342979 [cTOF-11-L14]">
      <seq>gaagccttcactaagccaaaagaaaatggcggtcttctctatgatgctttggcaagacctacaaagctttgattgtttaggtgtgtaaagaagacaacccatttgcccaaaaggagaataaattagcatgtgagctgaagtttctgaagaaattggcttcgcttgcctttataaccctctttcccattgtcaatttcaagatatttactacagttgtcttcttctcttcatttaatgagatatcagtgatgcctcatcagaaccagggacaaaatgggcagcagggtatgtggatgtaccaatgcatccattgtaaaaaaaacttcccttcaagccaggccatagcaggccatacaaagggtcatttcagagatggctgggttaaaggaaccccccagagcaaagtatttgtactattttctgagtatcagcaacagcagggttctatcactgactcttcaattcccgagaaacagattttttctgcagcaacttctgacactgacttagcagatgctcatcaattgcaaataggtgatgtgcagaattccagaagccntggtcgtgcggcctccatctccagcttcgtctagcagaagaccacgaatccctaggcatcatttgaggcttcgtgatctgaagatactagctaggctaagggctcgtcttacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0002K14-GUpky/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0002K14.1" temp_strand="+" temp_description="C02SLe0002K14.1  AC215442.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0002K14 sequenced_by:kribb upload_account_name:korea">
        <position start="8592" stop="18073"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="8892" g_stop="8957" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="66" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="8958" i_stop="9066" i_length="109">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="9067" g_stop="9200" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="67" r_stop="200" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="9201" i_stop="16620" i_length="7420">
            <donor d_prob="0.965" d_score="1.00"/>
            <acceptor a_prob="0.532" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="16621" g_stop="16686" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="201" r_stop="266" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="16687" i_stop="17368" i_length="682">
            <donor d_prob="0.856" d_score="1.00"/>
            <acceptor a_prob="0.936" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="17369" g_stop="17773" g_length="405"/>
          <reference_exon_boundary r_type="cDNA" r_start="267" r_stop="672" r_length="406" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0002K14.1" gen_strand="+" ref_id="SGN-E342979" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>671</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0002K14.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E342979" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="8892" e_stop="8957"/>
          <exon e_start="9067" e_stop="9200"/>
          <exon e_start="16621" e_stop="16686"/>
          <exon e_start="17369" e_stop="17773"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGCCTTCACTAAGCCAAAAGAAAATGGCGGTCTTCTCTATGATGCTTTGGCAAGACCTACAAAGGTAACGTATCCCTAATAAAACAGCAAAAAAATGCATTTTGTTTCTGTTATGCACAATTTCAGTTCTTAGTTTTCTCACTTCCTTTGTAATTTTTTGGGTATATAAGCAGCTTTGATTGTTTAGGTGTGTAAAGAAGACAACCCATTTGCCCAAAAGGAGAATAAATTAGCATGTGAGCTGAAGTTTCTGAAGAAATTGGCTTCGCTTGCCTTTATAACCCTCTTTCCCATTGTCAATTTCAAGGTAAAAGTACTGATAATTGGACTACTAATCTACATAATTGAAGAAAAAAAGGGGAAAAATGGTTCTTTTTTTTTTTTTTTGATTGCACTGAGATATACTGCTAAATCTTTATGTAATTGAGAATCTAGATTGTTGGGTATATAAGTATTGAATGCTAGCATGAAAATTCATGTTACTGTGATTCATTACTGGGTATCCATTTGGTTTGCTATATGTGGAGATTTTACTCTTCTTTTAGAATTATACATTATTTCAAGGATGTGAGGTTCTTACTTTAATTTTCCTCATGATTTATACCTGTATAAGTTAGAGGGAAGGAACTATGTATTATTTTATACAAGATTTTTTTAGAAAAAGATTTCATTTTTTGGAAAGACAGTGGTTGCAAGCAATCTATTAGGACCTTTGACCCTTTCTGGTAGATGATCAACATTGTGTACACCAGGATGGTCTTCCAAAGAAAAAGCTCACTTTGCTAGATTGTCTACGACCTAATTGGGTTCCTGATATCAATGAGTAAAGTTGCCTTTACGTGATCCACCAGGACAAAGATATCCTTAGTAATTGGATTGAGAGTGAGATTGCTAGTTTTCTTGCTCCTCAACGTATCTACCATAATCATAGAGTCAACATCAATAGTGTCCTGCCTCAAGCCATTGTCTTTCAAATTGCCCGGCATATTTGGCTGCTATGGCTTCGGCCGCATGATGATTGTTGCACTGTATTGGGAATTCCATCTTGCAGTTAGGAAAAGTTTTATCCACTAGATACTTTGAGGTACCACATAATATGCTGCTCCGTTCTCCGTGTAGAATCTGTTCTGGTTGCAGATCTACCAGCACATCTGCTTCTTCAATAGTTGCATTTTGGGCTCCCATATATAAGCTTGAAAATGAACATCTCCAATTTTCTCTCTAGACCATTGAGATAATCTCTGTCCCAGTTCTTTGAGCTTCTGTTGTAATCTCCACGTAGGATTACCCTCAATTTCTTGATCATTCAATACTCACTATCTCTTGGAAATCAGGTTGTGTTATCTAGAAATCCAGGAATTTGAAATACTTCATTCCAGTAGTTTGCTCATTATCACATTTCAGCAGCATGGGCTTATGATCAGAGCCAGCCCTGGGCAAGTGCCTCACAGTCTTGAAGTGGTCATCAGTGTTATTAAAGCAAAAATCACAAAAATCTCAAAGGATGGTGGTGCTTCAAGTGCAAATAAAATATGGACTTAGTGAAAATAGGCGCAAAGGGAGAAAAAGATACAAGTATATCACATATATCTAGTTCAAAACTAACAATTATAAGCATGAATGACAAATATATGAGCAATGAGATTGGAAAAAATTATGATAAAGTGAAATATCAATTGTTTAGTGTCACCTCTGTAGAAGATGTGCATTGAAAAGGGTTTCAGACCAATCAGATCAATTTGAGGGGTGTACATGACCATTTCTAAGCTGATCACTGAAAGATTGAAAATGGTTATAGGGAAGCTGGTTGGGATCAAATGGCATTCTTGAAAGGAAGATGAATCATGAATGCTGCTCTTCTGGCTAATGAAATGGTCGACTCTAGGGTAAAACAGAAGAAACCATGCATCATATACTAGCTAGATATTCAATAGGCTTATGATCATGTTAATTGGAATTTCTTGCTAAAAATTTTGATAGACATGGGCTTTGGAGAGAAATGGAATTGCTGGATACAGTTTTGCATCTCGAATGTAAGGTTCTCACTCATTATAAATGGTAAACCGGTTGGATTTTTTCAATCCCATAGAGGTCTTAGACAAGGAGACCCTATGTCGCCTTTTTTGTTCCTACTTACTATGGAGGGTCTGCACCACATGTTCAAGGTAAATAGTTGGGTAAAAGGATTCAATGCTCATATAGGGAGAGGTGAAGATCTTGAAATCAAACATCTTTTTTATGCAGATGATGCTCGGGTTTTTGTGAAGCAAAAGTGGACCAATTAGACACTTAAGAGCAATCCTTACAATATTTGAGGGCATTTTCAGGACTTTATGTTAACTAGTCGAAAAGTTTTCTCTTCCCAATTTATCAGGTAGACAATTAACAAAGTCTAGCTGAGAATCTGGGATGTCAGATAGCCTCTCGGCTTACAAAGTACCTAGGATTGTCTCTGGGGGGCCATGAACAAGGAGTTGGAGGCATGGAATCGAGGTGATGGAGAGATGTGTGAAAAGGCTATCAAGATGAAATAGTCAATACTTCCACTACGGGGTAGGTTGACTGTCATCAAGTCAGTTTTAGATGGGCAACCTATCTACATAATGAGCCTATTTCCAATACCCAAGAACACTATGAAGAGAATCAACAAAATGAGAAGATCCTTCATTTGGCAAGGAACAAAGAATAGAGAGGCTACAACCTGGTGAAATGGGAGATACTCACTTTGAGCAGAAAACAATGTGGCCTTGGCATGAGAAATCTTTGCATCCAGAATAAATGCTTGCTGTAAAAATGGCTATGGAGATTTTGTACGGGAGATAGAGCCCTATGGAGAAAATTCGCAGCAGAAAAATATGGCTTGTTTAGCAAATGGACTACTGAGAAGGTGAAGGGGTCGTTTCAATGCTGTGGGTGGAAGTCCGTTAAGAAGGCTGTGGCCACAGTTTAATAACAATATCTATACTAATGTGGGAAATGGTCTGAAAACATATTTCTGAAATGAAATCTGGAAAGGGTATGATAGCCCAATGAACTTATTCCCAAACCTCTACACCCTGAGCTTACAAAGATTTGCTACTGTTGCTCAAGTATGGAGCCAACAAGAGTAGAACTTAGTGTTCAGGAGGGCTTCTGAATGGATGGGATGTGGGCGGGCTACTTGAGGTTCTTAACACCCCACCAGCCATGTCTCAAAGAAAGGATAAACGAATTTGGAAGCTACATAACATAGGAATGTCATAGTTAAATCTTGCTAAATCTTGCTACTGGTAATGAATGTTAATCAGTCGATACTAACAAGTGGCCTTGGAAGCTAGTGTGGAAGACGAGAAACCCATTAAAAGTAGCATGTTTTGCGTGGTTGGTCATAAGAAAAGTTTGCCTTACCCATGAGGCATTACAAAAAAGGGGATGCAGTTTTTTTTTTTGAAACTGAAAAGGGGGGGGGGGGATGCAGTTTTGCTCAAGATGCTTATGTGTGAGTAGAAAGCTGAAGTAAATAATCATTTGTTCATTCATGGTATAGCAGCTTCAAAATTGTGGAATATGTGGAGAGAGGTGATTAGGGCAAAATTTGAAATGGAGAAAAGGTGGATGACAAAGATGGTAACTACACCATATGAATATGGTATCTGGAGATCAGTAAGAAATCTTTGGGCTCGTTTCGTTCTAGAATCAGATTCCAGTTGGGTAATGGAATGAAGGTGTCATTTTGGGAGGACAAATGGATAGCCCAAAGAATCCTGAAACTATTATTCCCGGACTTATGTACACTGAGCTTGCAACAAATGCAACTCTGGCTGAAATGTGGACAGGACAGGGGTGGAACTTACATCTTAGGAAGAATTTAAATGATTGGGAGATGGGGAACATTGTGACCTTCCATGATACAATGGCACAATTTAGTACTCTGAGTAGGGAAGAAGACAAGGTTGTGTGGAAATCGACAGCAAAGGGGTCTTCAGTGTCAAGTCAGCTTACAAAGATCTCCATCATTCAAATTCAAATGACAGGATGGAGCTCTGGCCATGGCAGATGATAAAATCCCATACAAGGTAAACTGCTTCACATGGTTACTAGCAAAGGAAGCAGTGCTGTCACAAGAAAATATAAAGAAGAGGAAGTTCCAACTATGTTCAAGATTCTATTGTGTGAGGAACAGGCAGAGATAGTTGACCATCTCTTTCTGCATTGCAAATGGACAAATCAATTATGGAGAATATTCAGCAGCCTTAGGAAGATCACTTGGGTGAAACCAAGAAAAATAGCACAACTCCTAAATTGTTGGATCAATATAGGCAACACTACAATTAAGGAGGAGAGATGGAGGATTGTCCCAGCTTGTATATGGTGGACAGTGTGGAAAGAAAGGAATCAAAGAAGTTTTGAGGGCAAGAAGAACAATTTGCAGAATTTTAAGATGAATTGTATAGCTCTTTATTGTTTTTGGTGTAAACAGAAAGTTTTAGTACAGTCAGAAGAACTTTTTGATGTTATAGATTATTTGTGACAAAAAGAACAGATGGAGTCAGTCTAGTTTGTAATACTTTTGGAGGGGGGCTACTTTGATGTAGTATACCTGTGGATAAATAGGAAAAAAAGGTTATCATTCTCAAAAAAAAGTATACTAGGGGTTAGCTGGGTGATGCCAAGGACAACCATTGAGCTCTTTAATAGCCGGACAAGAATTGGCAGCAGAGGGAAAAGTGAAGACTGGTGGACGACTATCCCCCTGAATATTGGGGACCCTATGGTAAAAGAAAGGAATGCTAGGTGTTTTAAAGGACAAAATGATAGTTTTGATTTCTCTGAATATATGGACTCTTGTGGCGTGGTTGATATTGGGTAAACAGGTCCTAAATACAGAAGGTGCAACAACTGGACATCTAGCAAAAGGATATGGAAAAGGCTGAACAGAGTATTCATTAATAGCTTATGGGCTCAGAATTCAATCAGCGTCATCGAAGGTGCGCTAAGCACGCTTAGGCCCTGAAGCCGTCTTTGTTGGAACCATCCGTCCGTAGCTGATCATTTTTATCCGCACATTTGTTGTCATCAGCCATCCTTTTTTCCTTAGTACAATTTATCTAAGCTTGATCAGCAACTATAGCATTCTTTCCAGTAGGAACCCTCTTCTCTGCCCTCTTCTGTTCTAATTCTCTACGTTGAGTTATTGAGTGCCCCAAGATTTTGCAATTTCTACAAAATTTAGTTACTATAGGAGAGTCCTCATTGGTACTGCAATTTATTTTACGCAATTCCATCCGTGACAGTGGAATGGAGTTCCAGCAAAAGCACCCAGATAGGGACTACAGGAGATTCCTCATCTGATCTGAATGGTGGAGTGCATTTCTCTAGCCACATCACTTGACCGTCTATTTGAATAGATCGGTTATACCAAACATTTTTTAAATCTTCCTCATTGGAAAAATCTATAAACATAACGCAAAAATCGTAAACTCAAATCTTAACTTCACCTCTGATAAATTTGTGGCCTAGTCATGAATTTACCCACCAGAGTTAGTTTCACTCTTCAGCAGTAATTCCATAGTAATCGCTTGATTTGAAAATGATTGTCGGCATGCAATTGTTAGTATCATAACCAGCTTTCACTTGTGGATTCCCAAGTCGCTGGTTTCTAGGCTTGGGATAGCACTTAACGGTCGATTGAATTGCTTCAGAATGTTAGATTTCTGTGGAATTTCCTCCACAGCTAAGGTCACCATAGTAGTATCAATGTTTTTATCTACCAGTGGCGCCGTGCCAGGTCTACTGGTGTCCCATTGGACGGAGTGTGAGGCTCAATCACGAGAGAAAACAACCGTTGAGAAATAATACTCATGTATTGTATGGAAAACTTTTTCTGTTTACTTATTTTTATACGGCATAGAATGTGAAATAAGAACAAGGGTAAGTCATACATGGATAAATAAACTAAAGGTGAAGTGACCCTTATGATAGTAAAGAAACTTTTATTTTGGTTAACAAGTAACATATATTTCTCTCTCTGTCGAATACTCAGTTGACTCATACTAGTCTCATACAATAATGTTAAGTAAAGTGTTTTTTATTGATACTTCTTCAGAGCAAAAAGAAAGTTGTCTCTGTCATGAGCAGATATGGGTAAATTCATGTGGAAACAAGTTTTCATCTGTCTGGCTTGGAAAATGATAAACATTTCAGGATCTCATCTTTTCCACGATCTTGGCCAGAGGACTTGGAATTAAATTATTCTGAAGAAGCCACATAAATGATACAATTGAACCTACTTTGTCTACTTCATGATTAGACACTATCTGAACTTTTTGTGCTACAACTAGAAGAGCTAATGGAGATTCTACATAGAAACTCAGTAAAAAACAAATTTTTGGCTGAGTTGTACATTTTACAAGGCATTAGTCTTTTTTTTCTAAAAAAGTTGTTATTTTCAGTTCTCCTGAAAAATATTTTCAATCAAACACCACTAGAAAGGAGTGTTTCACTTTACTCCTCTCTAATTGTGTATGGCTCGGGTTTTTGACAAGTAATGTTGAATTTAATAATGGATTCTAACAAGGAATCAACATCATTTACATAGGGGCCAAGTGGCATCAATTAGCTAACAGAAAATACATCTAAGTTTGAGGCTATGTATATTTCTCCTTTTGCCAAACTTTTGTTCGAGTTTTTAGAAATACAAAATAAGGAAGTTCATGATTTTTTTAGCTGTTTCCAATCTGTTGATCTCAGTTTTATTTACGGAATTGGATTACCTTTCCTTCTTTGCAAAATTCACTTGTTGGATCAAAGAGAGGAAATGATCATTTAAATTTCTGTTACCGTTTACTTCTCATTGCCTTAAAAGGGAATCTGTTCTCTAATTGCCATGAGTTATACTGCTAAATCTTCTGAAAATAGAATCTACATTATTGGAAAGAAATATTAAACGCTGGCATGAAAGCTCATCTTAGTGTAATTAATCACTTGATATTATAAGTGATTAAGGATTTATGCTTAGCTTTCATCCTGGATCGACAGCTAGTATTTTATAGTTGTGCATTGTTTCACTTCTCCTTCTGTAGGATACTCAGTTGGCTCATACTTCTCATAAAATAGTGTTCAGAAGATTATTTTCAGTTGATACTTGTCTCTTCGTGACAAAAAGTATGTCACCTTTGTCATGAGTATCATGGACTCTTGTTTAAACAAGTATTTATTTGTCTGCCTTGAGAACCTAGTTCTGTCATTATTTTCCTATCCATCTTGGATGTTATTAATAATTTGAGACAATTAGTGATATAGCTGGAATATTTCTTGTAACTGTCTTATCATTTTACTAGCCATTCTTGAAGTAGGTTACCATTGGGGACCAAAGGCAACACATGTACGTGGAATATCATTTACTTCAAGGGATAATACCAAAATAAAGGAAAATAAATGGAACCTACAAAGTTTCTATTTGACTCAACCATGATTTAATACATTTTCTCCTCTTTCATGCATAATTCTGGAAGTAATCTTTGAACGTTGTCTCTTTAACTAGCAGAGTAGTTTCACCACAGTTCTTTTCCTCTCTTTTTGTTATTTTGGTCCTTCTGTTTTGTCCTCATCATTTATGTTTGATGATTCTGTTAACTGAAGCCATGTAGTATTTGATCTAAATAGATTGAAATAATTCTACCATTGCTTTAAAAATTGCAAATAAACATTTCTCTTATCCTTCACTAACCCTTGTCTGTAATCTGCAGATATTTACTACAGTTGTCTTCTTCTCTTCATTTAATGAGATATCAGTGATGCCTCATCAGAACCAGGTATGATTGTCATCAGGGAATAGAGTGAATTGTGAAACAAATAGGAAATAATGCAATACTTGGGTAGAGTTTCAGTGAATATAATATCCCTTCTCTTATAAGGTAATTAGGGAATGAAAATCCTACATATGACAAGTAAGAAGAATCATTGGAAGGAATGAACAATATATGTCACATCCTAATTCTATTCTGTGATAAGGTTCCCTGGTTCATAAACTCTAAGCTGACTGGTCATATCTCTCTACCAAGAGAAAATAGGGAAAATACCATACTCTTAAGATTCTATAAACCCTTGATTGGTACATATACTTTTTAAGTTTGTAACTCTACCTGCTTTCTTAACCTAGTGATGGAGTTACCTAATGTGTTGAACCCCTGAAGGATCAAGGACCATAAATAGTTGGAACAAGTCATCATTGCCTTTTAAAAGCAAATATTTCAACTATTTATTTATTAGGACAAAATCAATTGAAAAAAAGAAACTTAAGAGTTCCATTATTTATGGTCAAATAGAAAAAGATAAAACCAAAATAACGGAGTTGCAATTGTGTACTCCTTGTTGTTATATCTTTAAGATGCAATGACTTTTTTTATGCCAACTCTGTTTTTAAAAATTACTTGGTTAGAGCTCCTTTATATGTATTCCTCTTCTTCGATTAACATGGAAGTAACAACAATACAGGGACAAAATGGGCAGCAGGGTATGTGGATGTACCAATGCATCCATTGTAAAAAAAACTTCCCTTCAAGCCAGGCCATAGCAGGCCATACAAAGGGTCATTTCAGAGATGGCTGGGTTAAAGGAACCCCCCAGAGCAAAGTATTTGTACTATTTTCTGAGTATCAGCAACAGCAGGGTTCTATCACTGACTCTTCAATTCCCGAGAAACAGATTTTTTCTGCAGCAACTTCTGACACTGACTTAGCAGATGCTCATCAATTGCAAATAGGTGATGTGCAGAATTCCAGAAGCC-TGGTCGTGCGGCCTCCATCTCCAGCTTCGTCTAGCAGAGAACCACGAATCCCTAGGCATCATTTGAGGCTTCGTGATCTGAAGATACTAGCTAGGCTAAGGGCTCGTCTTACC</genome_strand>
        <mrna_strand>GAAGCCTTCACTAAGCCAAAAGAAAATGGCGGTCTTCTCTATGATGCTTTGGCAAGACCTACAAAG.............................................................................................................CTTTGATTGTTTAGGTGTGTAAAGAAGACAACCCATTTGCCCAAAAGGAGAATAAATTAGCATGTGAGCTGAAGTTTCTGAAGAAATTGGCTTCGCTTGCCTTTATAACCCTCTTTCCCATTGTCAATTTCAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................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      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0002K14-GUpky/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E298086" ref_strand="+" ref_description="SGN-E298086 [cLEW-12-K7]">
      <seq>taagccaaaagaaaatggcggtcttctctatgatgctttggcaagacctacaaaggtgtgtaaagaagacaacccatttgcccaaaaggagaataaattagcatgtgagctgaagtttctgaagaaattggcttcgcttgcctttataaccctctttcccattgtcaatttcaagatatttactacagttgtcttcttctcttcatttaatgagatatcagtgatgcctcatcagaaccagggacaaaatgggcagcagggtatgtggatgtaccaatgcatccattgtaaaaaaaacttcccttcaagccaggccatagcaggccatacaaagggtcatttcagagatggctgggttaaaggaaccccccagagcaaagtatttgtactattttctgagtatcagcaacagcagggttctatcactgactcttcaattcccgagaaacagattttttctgcagcaacttctgacactgacttagcagatgctcatcaattgcaaataggtgatgtgcagaattccagaagcctggtcgtgcggcctccatctccagcttcgtctagcagagaaccacgaatccctaggcatcatttgaggcttcgtgatctgaagatacta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0002K14-GUpky/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0002K14.1" temp_strand="+" temp_description="C02SLe0002K14.1  AC215442.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0002K14 sequenced_by:kribb upload_account_name:korea">
        <position start="8603" stop="18049"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="8903" g_stop="8957" g_length="55"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="55" r_length="55" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="8958" i_stop="9080" i_length="123">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.951" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="9081" g_stop="9200" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="56" r_stop="175" r_length="120" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="9201" i_stop="16620" i_length="7420">
            <donor d_prob="0.965" d_score="1.00"/>
            <acceptor a_prob="0.532" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="16621" g_stop="16686" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="176" r_stop="241" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="16687" i_stop="17368" i_length="682">
            <donor d_prob="0.856" d_score="1.00"/>
            <acceptor a_prob="0.936" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="17369" g_stop="17749" g_length="381"/>
          <reference_exon_boundary r_type="cDNA" r_start="242" r_stop="622" r_length="381" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0002K14.1" gen_strand="+" ref_id="SGN-E298086" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>622</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0002K14.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E298086" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="8903" e_stop="8957"/>
          <exon e_start="9081" e_stop="9200"/>
          <exon e_start="16621" e_stop="16686"/>
          <exon e_start="17369" e_stop="17749"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAGCCAAAAGAAAATGGCGGTCTTCTCTATGATGCTTTGGCAAGACCTACAAAGGTAACGTATCCCTAATAAAACAGCAAAAAAATGCATTTTGTTTCTGTTATGCACAATTTCAGTTCTTAGTTTTCTCACTTCCTTTGTAATTTTTTGGGTATATAAGCAGCTTTGATTGTTTAGGTGTGTAAAGAAGACAACCCATTTGCCCAAAAGGAGAATAAATTAGCATGTGAGCTGAAGTTTCTGAAGAAATTGGCTTCGCTTGCCTTTATAACCCTCTTTCCCATTGTCAATTTCAAGGTAAAAGTACTGATAATTGGACTACTAATCTACATAATTGAAGAAAAAAAGGGGAAAAATGGTTCTTTTTTTTTTTTTTTGATTGCACTGAGATATACTGCTAAATCTTTATGTAATTGAGAATCTAGATTGTTGGGTATATAAGTATTGAATGCTAGCATGAAAATTCATGTTACTGTGATTCATTACTGGGTATCCATTTGGTTTGCTATATGTGGAGATTTTACTCTTCTTTTAGAATTATACATTATTTCAAGGATGTGAGGTTCTTACTTTAATTTTCCTCATGATTTATACCTGTATAAGTTAGAGGGAAGGAACTATGTATTATTTTATACAAGATTTTTTTAGAAAAAGATTTCATTTTTTGGAAAGACAGTGGTTGCAAGCAATCTATTAGGACCTTTGACCCTTTCTGGTAGATGATCAACATTGTGTACACCAGGATGGTCTTCCAAAGAAAAAGCTCACTTTGCTAGATTGTCTACGACCTAATTGGGTTCCTGATATCAATGAGTAAAGTTGCCTTTACGTGATCCACCAGGACAAAGATATCCTTAGTAATTGGATTGAGAGTGAGATTGCTAGTTTTCTTGCTCCTCAACGTATCTACCATAATCATAGAGTCAACATCAATAGTGTCCTGCCTCAAGCCATTGTCTTTCAAATTGCCCGGCATATTTGGCTGCTATGGCTTCGGCCGCATGATGATTGTTGCACTGTATTGGGAATTCCATCTTGCAGTTAGGAAAAGTTTTATCCACTAGATACTTTGAGGTACCACATAATATGCTGCTCCGTTCTCCGTGTAGAATCTGTTCTGGTTGCAGATCTACCAGCACATCTGCTTCTTCAATAGTTGCATTTTGGGCTCCCATATATAAGCTTGAAAATGAACATCTCCAATTTTCTCTCTAGACCATTGAGATAATCTCTGTCCCAGTTCTTTGAGCTTCTGTTGTAATCTCCACGTAGGATTACCCTCAATTTCTTGATCATTCAATACTCACTATCTCTTGGAAATCAGGTTGTGTTATCTAGAAATCCAGGAATTTGAAATACTTCATTCCAGTAGTTTGCTCATTATCACATTTCAGCAGCATGGGCTTATGATCAGAGCCAGCCCTGGGCAAGTGCCTCACAGTCTTGAAGTGGTCATCAGTGTTATTAAAGCAAAAATCACAAAAATCTCAAAGGATGGTGGTGCTTCAAGTGCAAATAAAATATGGACTTAGTGAAAATAGGCGCAAAGGGAGAAAAAGATACAAGTATATCACATATATCTAGTTCAAAACTAACAATTATAAGCATGAATGACAAATATATGAGCAATGAGATTGGAAAAAATTATGATAAAGTGAAATATCAATTGTTTAGTGTCACCTCTGTAGAAGATGTGCATTGAAAAGGGTTTCAGACCAATCAGATCAATTTGAGGGGTGTACATGACCATTTCTAAGCTGATCACTGAAAGATTGAAAATGGTTATAGGGAAGCTGGTTGGGATCAAATGGCATTCTTGAAAGGAAGATGAATCATGAATGCTGCTCTTCTGGCTAATGAAATGGTCGACTCTAGGGTAAAACAGAAGAAACCATGCATCATATACTAGCTAGATATTCAATAGGCTTATGATCATGTTAATTGGAATTTCTTGCTAAAAATTTTGATAGACATGGGCTTTGGAGAGAAATGGAATTGCTGGATACAGTTTTGCATCTCGAATGTAAGGTTCTCACTCATTATAAATGGTAAACCGGTTGGATTTTTTCAATCCCATAGAGGTCTTAGACAAGGAGACCCTATGTCGCCTTTTTTGTTCCTACTTACTATGGAGGGTCTGCACCACATGTTCAAGGTAAATAGTTGGGTAAAAGGATTCAATGCTCATATAGGGAGAGGTGAAGATCTTGAAATCAAACATCTTTTTTATGCAGATGATGCTCGGGTTTTTGTGAAGCAAAAGTGGACCAATTAGACACTTAAGAGCAATCCTTACAATATTTGAGGGCATTTTCAGGACTTTATGTTAACTAGTCGAAAAGTTTTCTCTTCCCAATTTATCAGGTAGACAATTAACAAAGTCTAGCTGAGAATCTGGGATGTCAGATAGCCTCTCGGCTTACAAAGTACCTAGGATTGTCTCTGGGGGGCCATGAACAAGGAGTTGGAGGCATGGAATCGAGGTGATGGAGAGATGTGTGAAAAGGCTATCAAGATGAAATAGTCAATACTTCCACTACGGGGTAGGTTGACTGTCATCAAGTCAGTTTTAGATGGGCAACCTATCTACATAATGAGCCTATTTCCAATACCCAAGAACACTATGAAGAGAATCAACAAAATGAGAAGATCCTTCATTTGGCAAGGAACAAAGAATAGAGAGGCTACAACCTGGTGAAATGGGAGATACTCACTTTGAGCAGAAAACAATGTGGCCTTGGCATGAGAAATCTTTGCATCCAGAATAAATGCTTGCTGTAAAAATGGCTATGGAGATTTTGTACGGGAGATAGAGCCCTATGGAGAAAATTCGCAGCAGAAAAATATGGCTTGTTTAGCAAATGGACTACTGAGAAGGTGAAGGGGTCGTTTCAATGCTGTGGGTGGAAGTCCGTTAAGAAGGCTGTGGCCACAGTTTAATAACAATATCTATACTAATGTGGGAAATGGTCTGAAAACATATTTCTGAAATGAAATCTGGAAAGGGTATGATAGCCCAATGAACTTATTCCCAAACCTCTACACCCTGAGCTTACAAAGATTTGCTACTGTTGCTCAAGTATGGAGCCAACAAGAGTAGAACTTAGTGTTCAGGAGGGCTTCTGAATGGATGGGATGTGGGCGGGCTACTTGAGGTTCTTAACACCCCACCAGCCATGTCTCAAAGAAAGGATAAACGAATTTGGAAGCTACATAACATAGGAATGTCATAGTTAAATCTTGCTAAATCTTGCTACTGGTAATGAATGTTAATCAGTCGATACTAACAAGTGGCCTTGGAAGCTAGTGTGGAAGACGAGAAACCCATTAAAAGTAGCATGTTTTGCGTGGTTGGTCATAAGAAAAGTTTGCCTTACCCATGAGGCATTACAAAAAAGGGGATGCAGTTTTTTTTTTTGAAACTGAAAAGGGGGGGGGGGGATGCAGTTTTGCTCAAGATGCTTATGTGTGAGTAGAAAGCTGAAGTAAATAATCATTTGTTCATTCATGGTATAGCAGCTTCAAAATTGTGGAATATGTGGAGAGAGGTGATTAGGGCAAAATTTGAAATGGAGAAAAGGTGGATGACAAAGATGGTAACTACACCATATGAATATGGTATCTGGAGATCAGTAAGAAATCTTTGGGCTCGTTTCGTTCTAGAATCAGATTCCAGTTGGGTAATGGAATGAAGGTGTCATTTTGGGAGGACAAATGGATAGCCCAAAGAATCCTGAAACTATTATTCCCGGACTTATGTACACTGAGCTTGCAACAAATGCAACTCTGGCTGAAATGTGGACAGGACAGGGGTGGAACTTACATCTTAGGAAGAATTTAAATGATTGGGAGATGGGGAACATTGTGACCTTCCATGATACAATGGCACAATTTAGTACTCTGAGTAGGGAAGAAGACAAGGTTGTGTGGAAATCGACAGCAAAGGGGTCTTCAGTGTCAAGTCAGCTTACAAAGATCTCCATCATTCAAATTCAAATGACAGGATGGAGCTCTGGCCATGGCAGATGATAAAATCCCATACAAGGTAAACTGCTTCACATGGTTACTAGCAAAGGAAGCAGTGCTGTCACAAGAAAATATAAAGAAGAGGAAGTTCCAACTATGTTCAAGATTCTATTGTGTGAGGAACAGGCAGAGATAGTTGACCATCTCTTTCTGCATTGCAAATGGACAAATCAATTATGGAGAATATTCAGCAGCCTTAGGAAGATCACTTGGGTGAAACCAAGAAAAATAGCACAACTCCTAAATTGTTGGATCAATATAGGCAACACTACAATTAAGGAGGAGAGATGGAGGATTGTCCCAGCTTGTATATGGTGGACAGTGTGGAAAGAAAGGAATCAAAGAAGTTTTGAGGGCAAGAAGAACAATTTGCAGAATTTTAAGATGAATTGTATAGCTCTTTATTGTTTTTGGTGTAAACAGAAAGTTTTAGTACAGTCAGAAGAACTTTTTGATGTTATAGATTATTTGTGACAAAAAGAACAGATGGAGTCAGTCTAGTTTGTAATACTTTTGGAGGGGGGCTACTTTGATGTAGTATACCTGTGGATAAATAGGAAAAAAAGGTTATCATTCTCAAAAAAAAGTATACTAGGGGTTAGCTGGGTGATGCCAAGGACAACCATTGAGCTCTTTAATAGCCGGACAAGAATTGGCAGCAGAGGGAAAAGTGAAGACTGGTGGACGACTATCCCCCTGAATATTGGGGACCCTATGGTAAAAGAAAGGAATGCTAGGTGTTTTAAAGGACAAAATGATAGTTTTGATTTCTCTGAATATATGGACTCTTGTGGCGTGGTTGATATTGGGTAAACAGGTCCTAAATACAGAAGGTGCAACAACTGGACATCTAGCAAAAGGATATGGAAAAGGCTGAACAGAGTATTCATTAATAGCTTATGGGCTCAGAATTCAATCAGCGTCATCGAAGGTGCGCTAAGCACGCTTAGGCCCTGAAGCCGTCTTTGTTGGAACCATCCGTCCGTAGCTGATCATTTTTATCCGCACATTTGTTGTCATCAGCCATCCTTTTTTCCTTAGTACAATTTATCTAAGCTTGATCAGCAACTATAGCATTCTTTCCAGTAGGAACCCTCTTCTCTGCCCTCTTCTGTTCTAATTCTCTACGTTGAGTTATTGAGTGCCCCAAGATTTTGCAATTTCTACAAAATTTAGTTACTATAGGAGAGTCCTCATTGGTACTGCAATTTATTTTACGCAATTCCATCCGTGACAGTGGAATGGAGTTCCAGCAAAAGCACCCAGATAGGGACTACAGGAGATTCCTCATCTGATCTGAATGGTGGAGTGCATTTCTCTAGCCACATCACTTGACCGTCTATTTGAATAGATCGGTTATACCAAACATTTTTTAAATCTTCCTCATTGGAAAAATCTATAAACATAACGCAAAAATCGTAAACTCAAATCTTAACTTCACCTCTGATAAATTTGTGGCCTAGTCATGAATTTACCCACCAGAGTTAGTTTCACTCTTCAGCAGTAATTCCATAGTAATCGCTTGATTTGAAAATGATTGTCGGCATGCAATTGTTAGTATCATAACCAGCTTTCACTTGTGGATTCCCAAGTCGCTGGTTTCTAGGCTTGGGATAGCACTTAACGGTCGATTGAATTGCTTCAGAATGTTAGATTTCTGTGGAATTTCCTCCACAGCTAAGGTCACCATAGTAGTATCAATGTTTTTATCTACCAGTGGCGCCGTGCCAGGTCTACTGGTGTCCCATTGGACGGAGTGTGAGGCTCAATCACGAGAGAAAACAACCGTTGAGAAATAATACTCATGTATTGTATGGAAAACTTTTTCTGTTTACTTATTTTTATACGGCATAGAATGTGAAATAAGAACAAGGGTAAGTCATACATGGATAAATAAACTAAAGGTGAAGTGACCCTTATGATAGTAAAGAAACTTTTATTTTGGTTAACAAGTAACATATATTTCTCTCTCTGTCGAATACTCAGTTGACTCATACTAGTCTCATACAATAATGTTAAGTAAAGTGTTTTTTATTGATACTTCTTCAGAGCAAAAAGAAAGTTGTCTCTGTCATGAGCAGATATGGGTAAATTCATGTGGAAACAAGTTTTCATCTGTCTGGCTTGGAAAATGATAAACATTTCAGGATCTCATCTTTTCCACGATCTTGGCCAGAGGACTTGGAATTAAATTATTCTGAAGAAGCCACATAAATGATACAATTGAACCTACTTTGTCTACTTCATGATTAGACACTATCTGAACTTTTTGTGCTACAACTAGAAGAGCTAATGGAGATTCTACATAGAAACTCAGTAAAAAACAAATTTTTGGCTGAGTTGTACATTTTACAAGGCATTAGTCTTTTTTTTCTAAAAAAGTTGTTATTTTCAGTTCTCCTGAAAAATATTTTCAATCAAACACCACTAGAAAGGAGTGTTTCACTTTACTCCTCTCTAATTGTGTATGGCTCGGGTTTTTGACAAGTAATGTTGAATTTAATAATGGATTCTAACAAGGAATCAACATCATTTACATAGGGGCCAAGTGGCATCAATTAGCTAACAGAAAATACATCTAAGTTTGAGGCTATGTATATTTCTCCTTTTGCCAAACTTTTGTTCGAGTTTTTAGAAATACAAAATAAGGAAGTTCATGATTTTTTTAGCTGTTTCCAATCTGTTGATCTCAGTTTTATTTACGGAATTGGATTACCTTTCCTTCTTTGCAAAATTCACTTGTTGGATCAAAGAGAGGAAATGATCATTTAAATTTCTGTTACCGTTTACTTCTCATTGCCTTAAAAGGGAATCTGTTCTCTAATTGCCATGAGTTATACTGCTAAATCTTCTGAAAATAGAATCTACATTATTGGAAAGAAATATTAAACGCTGGCATGAAAGCTCATCTTAGTGTAATTAATCACTTGATATTATAAGTGATTAAGGATTTATGCTTAGCTTTCATCCTGGATCGACAGCTAGTATTTTATAGTTGTGCATTGTTTCACTTCTCCTTCTGTAGGATACTCAGTTGGCTCATACTTCTCATAAAATAGTGTTCAGAAGATTATTTTCAGTTGATACTTGTCTCTTCGTGACAAAAAGTATGTCACCTTTGTCATGAGTATCATGGACTCTTGTTTAAACAAGTATTTATTTGTCTGCCTTGAGAACCTAGTTCTGTCATTATTTTCCTATCCATCTTGGATGTTATTAATAATTTGAGACAATTAGTGATATAGCTGGAATATTTCTTGTAACTGTCTTATCATTTTACTAGCCATTCTTGAAGTAGGTTACCATTGGGGACCAAAGGCAACACATGTACGTGGAATATCATTTACTTCAAGGGATAATACCAAAATAAAGGAAAATAAATGGAACCTACAAAGTTTCTATTTGACTCAACCATGATTTAATACATTTTCTCCTCTTTCATGCATAATTCTGGAAGTAATCTTTGAACGTTGTCTCTTTAACTAGCAGAGTAGTTTCACCACAGTTCTTTTCCTCTCTTTTTGTTATTTTGGTCCTTCTGTTTTGTCCTCATCATTTATGTTTGATGATTCTGTTAACTGAAGCCATGTAGTATTTGATCTAAATAGATTGAAATAATTCTACCATTGCTTTAAAAATTGCAAATAAACATTTCTCTTATCCTTCACTAACCCTTGTCTGTAATCTGCAGATATTTACTACAGTTGTCTTCTTCTCTTCATTTAATGAGATATCAGTGATGCCTCATCAGAACCAGGTATGATTGTCATCAGGGAATAGAGTGAATTGTGAAACAAATAGGAAATAATGCAATACTTGGGTAGAGTTTCAGTGAATATAATATCCCTTCTCTTATAAGGTAATTAGGGAATGAAAATCCTACATATGACAAGTAAGAAGAATCATTGGAAGGAATGAACAATATATGTCACATCCTAATTCTATTCTGTGATAAGGTTCCCTGGTTCATAAACTCTAAGCTGACTGGTCATATCTCTCTACCAAGAGAAAATAGGGAAAATACCATACTCTTAAGATTCTATAAACCCTTGATTGGTACATATACTTTTTAAGTTTGTAACTCTACCTGCTTTCTTAACCTAGTGATGGAGTTACCTAATGTGTTGAACCCCTGAAGGATCAAGGACCATAAATAGTTGGAACAAGTCATCATTGCCTTTTAAAAGCAAATATTTCAACTATTTATTTATTAGGACAAAATCAATTGAAAAAAAGAAACTTAAGAGTTCCATTATTTATGGTCAAATAGAAAAAGATAAAACCAAAATAACGGAGTTGCAATTGTGTACTCCTTGTTGTTATATCTTTAAGATGCAATGACTTTTTTTATGCCAACTCTGTTTTTAAAAATTACTTGGTTAGAGCTCCTTTATATGTATTCCTCTTCTTCGATTAACATGGAAGTAACAACAATACAGGGACAAAATGGGCAGCAGGGTATGTGGATGTACCAATGCATCCATTGTAAAAAAAACTTCCCTTCAAGCCAGGCCATAGCAGGCCATACAAAGGGTCATTTCAGAGATGGCTGGGTTAAAGGAACCCCCCAGAGCAAAGTATTTGTACTATTTTCTGAGTATCAGCAACAGCAGGGTTCTATCACTGACTCTTCAATTCCCGAGAAACAGATTTTTTCTGCAGCAACTTCTGACACTGACTTAGCAGATGCTCATCAATTGCAAATAGGTGATGTGCAGAATTCCAGAAGCCTGGTCGTGCGGCCTCCATCTCCAGCTTCGTCTAGCAGAGAACCACGAATCCCTAGGCATCATTTGAGGCTTCGTGATCTGAAGATACTA</genome_strand>
        <mrna_strand>TAAGCCAAAAGAAAATGGCGGTCTTCTCTATGATGCTTTGGCAAGACCTACAAAG...........................................................................................................................GTGTGTAAAGAAGACAACCCATTTGCCCAAAAGGAGAATAAATTAGCATGTGAGCTGAAGTTTCTGAAGAAATTGGCTTCGCTTGCCTTTATAACCCTCTTTCCCATTGTCAATTTCAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................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      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0002K14-GUpky/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E298030" ref_strand="+" ref_description="SGN-E298030 [cLEW-12-K19]">
      <seq>ccaaaataaaatggcggtcttctctatgatgctttggcaggacctacaaaggtgtgtaaagaagacaacccatttgcccaaaaggagaataaattagcatgtgagctgaagtttctgaagaaattggcttcgcttgcctttataaccctctttcccattgtcaatttcaagatatttactacagttgtcttcttctcttcatttaatgagatatcagtgatgcctcatcagaaccagggacaaaatgggcagcagggtatgtggatgtaccaatgcatccattgtaaaaaaaacttcccttcaagccaggccatagcaggccatacaaagggtcatttcagagatggctgggttaaaggaaccccccagagcaaagtatttgtactattttctgagtatcagcaacagcagggttctatcactgactcttcaattcccgagaaacagattttttctgcagcaacttctgacactgacttagcagatgctcatcaattgcaaataggtgatgtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0002K14-GUpky/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0002K14.1" temp_strand="+" temp_description="C02SLe0002K14.1  AC215442.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0002K14 sequenced_by:kribb upload_account_name:korea">
        <position start="8607" stop="17944"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="8907" g_stop="8957" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="51" r_length="51" r_score="0.961"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="8958" i_stop="9080" i_length="123">
            <donor d_prob="0.999" d_score="0.96"/>
            <acceptor a_prob="0.951" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="9081" g_stop="9200" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="52" r_stop="171" r_length="120" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="9201" i_stop="16620" i_length="7420">
            <donor d_prob="0.965" d_score="1.00"/>
            <acceptor a_prob="0.532" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="16621" g_stop="16686" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="172" r_stop="237" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="16687" i_stop="17368" i_length="682">
            <donor d_prob="0.856" d_score="1.00"/>
            <acceptor a_prob="0.936" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="17369" g_stop="17644" g_length="276"/>
          <reference_exon_boundary r_type="cDNA" r_start="238" r_stop="513" r_length="276" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0002K14.1" gen_strand="+" ref_id="SGN-E298030" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>513</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0002K14.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E298030" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="8907" e_stop="8957"/>
          <exon e_start="9081" e_stop="9200"/>
          <exon e_start="16621" e_stop="16686"/>
          <exon e_start="17369" e_stop="17644"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCAAAAGAAAATGGCGGTCTTCTCTATGATGCTTTGGCAAGACCTACAAAGGTAACGTATCCCTAATAAAACAGCAAAAAAATGCATTTTGTTTCTGTTATGCACAATTTCAGTTCTTAGTTTTCTCACTTCCTTTGTAATTTTTTGGGTATATAAGCAGCTTTGATTGTTTAGGTGTGTAAAGAAGACAACCCATTTGCCCAAAAGGAGAATAAATTAGCATGTGAGCTGAAGTTTCTGAAGAAATTGGCTTCGCTTGCCTTTATAACCCTCTTTCCCATTGTCAATTTCAAGGTAAAAGTACTGATAATTGGACTACTAATCTACATAATTGAAGAAAAAAAGGGGAAAAATGGTTCTTTTTTTTTTTTTTTGATTGCACTGAGATATACTGCTAAATCTTTATGTAATTGAGAATCTAGATTGTTGGGTATATAAGTATTGAATGCTAGCATGAAAATTCATGTTACTGTGATTCATTACTGGGTATCCATTTGGTTTGCTATATGTGGAGATTTTACTCTTCTTTTAGAATTATACATTATTTCAAGGATGTGAGGTTCTTACTTTAATTTTCCTCATGATTTATACCTGTATAAGTTAGAGGGAAGGAACTATGTATTATTTTATACAAGATTTTTTTAGAAAAAGATTTCATTTTTTGGAAAGACAGTGGTTGCAAGCAATCTATTAGGACCTTTGACCCTTTCTGGTAGATGATCAACATTGTGTACACCAGGATGGTCTTCCAAAGAAAAAGCTCACTTTGCTAGATTGTCTACGACCTAATTGGGTTCCTGATATCAATGAGTAAAGTTGCCTTTACGTGATCCACCAGGACAAAGATATCCTTAGTAATTGGATTGAGAGTGAGATTGCTAGTTTTCTTGCTCCTCAACGTATCTACCATAATCATAGAGTCAACATCAATAGTGTCCTGCCTCAAGCCATTGTCTTTCAAATTGCCCGGCATATTTGGCTGCTATGGCTTCGGCCGCATGATGATTGTTGCACTGTATTGGGAATTCCATCTTGCAGTTAGGAAAAGTTTTATCCACTAGATACTTTGAGGTACCACATAATATGCTGCTCCGTTCTCCGTGTAGAATCTGTTCTGGTTGCAGATCTACCAGCACATCTGCTTCTTCAATAGTTGCATTTTGGGCTCCCATATATAAGCTTGAAAATGAACATCTCCAATTTTCTCTCTAGACCATTGAGATAATCTCTGTCCCAGTTCTTTGAGCTTCTGTTGTAATCTCCACGTAGGATTACCCTCAATTTCTTGATCATTCAATACTCACTATCTCTTGGAAATCAGGTTGTGTTATCTAGAAATCCAGGAATTTGAAATACTTCATTCCAGTAGTTTGCTCATTATCACATTTCAGCAGCATGGGCTTATGATCAGAGCCAGCCCTGGGCAAGTGCCTCACAGTCTTGAAGTGGTCATCAGTGTTATTAAAGCAAAAATCACAAAAATCTCAAAGGATGGTGGTGCTTCAAGTGCAAATAAAATATGGACTTAGTGAAAATAGGCGCAAAGGGAGAAAAAGATACAAGTATATCACATATATCTAGTTCAAAACTAACAATTATAAGCATGAATGACAAATATATGAGCAATGAGATTGGAAAAAATTATGATAAAGTGAAATATCAATTGTTTAGTGTCACCTCTGTAGAAGATGTGCATTGAAAAGGGTTTCAGACCAATCAGATCAATTTGAGGGGTGTACATGACCATTTCTAAGCTGATCACTGAAAGATTGAAAATGGTTATAGGGAAGCTGGTTGGGATCAAATGGCATTCTTGAAAGGAAGATGAATCATGAATGCTGCTCTTCTGGCTAATGAAATGGTCGACTCTAGGGTAAAACAGAAGAAACCATGCATCATATACTAGCTAGATATTCAATAGGCTTATGATCATGTTAATTGGAATTTCTTGCTAAAAATTTTGATAGACATGGGCTTTGGAGAGAAATGGAATTGCTGGATACAGTTTTGCATCTCGAATGTAAGGTTCTCACTCATTATAAATGGTAAACCGGTTGGATTTTTTCAATCCCATAGAGGTCTTAGACAAGGAGACCCTATGTCGCCTTTTTTGTTCCTACTTACTATGGAGGGTCTGCACCACATGTTCAAGGTAAATAGTTGGGTAAAAGGATTCAATGCTCATATAGGGAGAGGTGAAGATCTTGAAATCAAACATCTTTTTTATGCAGATGATGCTCGGGTTTTTGTGAAGCAAAAGTGGACCAATTAGACACTTAAGAGCAATCCTTACAATATTTGAGGGCATTTTCAGGACTTTATGTTAACTAGTCGAAAAGTTTTCTCTTCCCAATTTATCAGGTAGACAATTAACAAAGTCTAGCTGAGAATCTGGGATGTCAGATAGCCTCTCGGCTTACAAAGTACCTAGGATTGTCTCTGGGGGGCCATGAACAAGGAGTTGGAGGCATGGAATCGAGGTGATGGAGAGATGTGTGAAAAGGCTATCAAGATGAAATAGTCAATACTTCCACTACGGGGTAGGTTGACTGTCATCAAGTCAGTTTTAGATGGGCAACCTATCTACATAATGAGCCTATTTCCAATACCCAAGAACACTATGAAGAGAATCAACAAAATGAGAAGATCCTTCATTTGGCAAGGAACAAAGAATAGAGAGGCTACAACCTGGTGAAATGGGAGATACTCACTTTGAGCAGAAAACAATGTGGCCTTGGCATGAGAAATCTTTGCATCCAGAATAAATGCTTGCTGTAAAAATGGCTATGGAGATTTTGTACGGGAGATAGAGCCCTATGGAGAAAATTCGCAGCAGAAAAATATGGCTTGTTTAGCAAATGGACTACTGAGAAGGTGAAGGGGTCGTTTCAATGCTGTGGGTGGAAGTCCGTTAAGAAGGCTGTGGCCACAGTTTAATAACAATATCTATACTAATGTGGGAAATGGTCTGAAAACATATTTCTGAAATGAAATCTGGAAAGGGTATGATAGCCCAATGAACTTATTCCCAAACCTCTACACCCTGAGCTTACAAAGATTTGCTACTGTTGCTCAAGTATGGAGCCAACAAGAGTAGAACTTAGTGTTCAGGAGGGCTTCTGAATGGATGGGATGTGGGCGGGCTACTTGAGGTTCTTAACACCCCACCAGCCATGTCTCAAAGAAAGGATAAACGAATTTGGAAGCTACATAACATAGGAATGTCATAGTTAAATCTTGCTAAATCTTGCTACTGGTAATGAATGTTAATCAGTCGATACTAACAAGTGGCCTTGGAAGCTAGTGTGGAAGACGAGAAACCCATTAAAAGTAGCATGTTTTGCGTGGTTGGTCATAAGAAAAGTTTGCCTTACCCATGAGGCATTACAAAAAAGGGGATGCAGTTTTTTTTTTTGAAACTGAAAAGGGGGGGGGGGGATGCAGTTTTGCTCAAGATGCTTATGTGTGAGTAGAAAGCTGAAGTAAATAATCATTTGTTCATTCATGGTATAGCAGCTTCAAAATTGTGGAATATGTGGAGAGAGGTGATTAGGGCAAAATTTGAAATGGAGAAAAGGTGGATGACAAAGATGGTAACTACACCATATGAATATGGTATCTGGAGATCAGTAAGAAATCTTTGGGCTCGTTTCGTTCTAGAATCAGATTCCAGTTGGGTAATGGAATGAAGGTGTCATTTTGGGAGGACAAATGGATAGCCCAAAGAATCCTGAAACTATTATTCCCGGACTTATGTACACTGAGCTTGCAACAAATGCAACTCTGGCTGAAATGTGGACAGGACAGGGGTGGAACTTACATCTTAGGAAGAATTTAAATGATTGGGAGATGGGGAACATTGTGACCTTCCATGATACAATGGCACAATTTAGTACTCTGAGTAGGGAAGAAGACAAGGTTGTGTGGAAATCGACAGCAAAGGGGTCTTCAGTGTCAAGTCAGCTTACAAAGATCTCCATCATTCAAATTCAAATGACAGGATGGAGCTCTGGCCATGGCAGATGATAAAATCCCATACAAGGTAAACTGCTTCACATGGTTACTAGCAAAGGAAGCAGTGCTGTCACAAGAAAATATAAAGAAGAGGAAGTTCCAACTATGTTCAAGATTCTATTGTGTGAGGAACAGGCAGAGATAGTTGACCATCTCTTTCTGCATTGCAAATGGACAAATCAATTATGGAGAATATTCAGCAGCCTTAGGAAGATCACTTGGGTGAAACCAAGAAAAATAGCACAACTCCTAAATTGTTGGATCAATATAGGCAACACTACAATTAAGGAGGAGAGATGGAGGATTGTCCCAGCTTGTATATGGTGGACAGTGTGGAAAGAAAGGAATCAAAGAAGTTTTGAGGGCAAGAAGAACAATTTGCAGAATTTTAAGATGAATTGTATAGCTCTTTATTGTTTTTGGTGTAAACAGAAAGTTTTAGTACAGTCAGAAGAACTTTTTGATGTTATAGATTATTTGTGACAAAAAGAACAGATGGAGTCAGTCTAGTTTGTAATACTTTTGGAGGGGGGCTACTTTGATGTAGTATACCTGTGGATAAATAGGAAAAAAAGGTTATCATTCTCAAAAAAAAGTATACTAGGGGTTAGCTGGGTGATGCCAAGGACAACCATTGAGCTCTTTAATAGCCGGACAAGAATTGGCAGCAGAGGGAAAAGTGAAGACTGGTGGACGACTATCCCCCTGAATATTGGGGACCCTATGGTAAAAGAAAGGAATGCTAGGTGTTTTAAAGGACAAAATGATAGTTTTGATTTCTCTGAATATATGGACTCTTGTGGCGTGGTTGATATTGGGTAAACAGGTCCTAAATACAGAAGGTGCAACAACTGGACATCTAGCAAAAGGATATGGAAAAGGCTGAACAGAGTATTCATTAATAGCTTATGGGCTCAGAATTCAATCAGCGTCATCGAAGGTGCGCTAAGCACGCTTAGGCCCTGAAGCCGTCTTTGTTGGAACCATCCGTCCGTAGCTGATCATTTTTATCCGCACATTTGTTGTCATCAGCCATCCTTTTTTCCTTAGTACAATTTATCTAAGCTTGATCAGCAACTATAGCATTCTTTCCAGTAGGAACCCTCTTCTCTGCCCTCTTCTGTTCTAATTCTCTACGTTGAGTTATTGAGTGCCCCAAGATTTTGCAATTTCTACAAAATTTAGTTACTATAGGAGAGTCCTCATTGGTACTGCAATTTATTTTACGCAATTCCATCCGTGACAGTGGAATGGAGTTCCAGCAAAAGCACCCAGATAGGGACTACAGGAGATTCCTCATCTGATCTGAATGGTGGAGTGCATTTCTCTAGCCACATCACTTGACCGTCTATTTGAATAGATCGGTTATACCAAACATTTTTTAAATCTTCCTCATTGGAAAAATCTATAAACATAACGCAAAAATCGTAAACTCAAATCTTAACTTCACCTCTGATAAATTTGTGGCCTAGTCATGAATTTACCCACCAGAGTTAGTTTCACTCTTCAGCAGTAATTCCATAGTAATCGCTTGATTTGAAAATGATTGTCGGCATGCAATTGTTAGTATCATAACCAGCTTTCACTTGTGGATTCCCAAGTCGCTGGTTTCTAGGCTTGGGATAGCACTTAACGGTCGATTGAATTGCTTCAGAATGTTAGATTTCTGTGGAATTTCCTCCACAGCTAAGGTCACCATAGTAGTATCAATGTTTTTATCTACCAGTGGCGCCGTGCCAGGTCTACTGGTGTCCCATTGGACGGAGTGTGAGGCTCAATCACGAGAGAAAACAACCGTTGAGAAATAATACTCATGTATTGTATGGAAAACTTTTTCTGTTTACTTATTTTTATACGGCATAGAATGTGAAATAAGAACAAGGGTAAGTCATACATGGATAAATAAACTAAAGGTGAAGTGACCCTTATGATAGTAAAGAAACTTTTATTTTGGTTAACAAGTAACATATATTTCTCTCTCTGTCGAATACTCAGTTGACTCATACTAGTCTCATACAATAATGTTAAGTAAAGTGTTTTTTATTGATACTTCTTCAGAGCAAAAAGAAAGTTGTCTCTGTCATGAGCAGATATGGGTAAATTCATGTGGAAACAAGTTTTCATCTGTCTGGCTTGGAAAATGATAAACATTTCAGGATCTCATCTTTTCCACGATCTTGGCCAGAGGACTTGGAATTAAATTATTCTGAAGAAGCCACATAAATGATACAATTGAACCTACTTTGTCTACTTCATGATTAGACACTATCTGAACTTTTTGTGCTACAACTAGAAGAGCTAATGGAGATTCTACATAGAAACTCAGTAAAAAACAAATTTTTGGCTGAGTTGTACATTTTACAAGGCATTAGTCTTTTTTTTCTAAAAAAGTTGTTATTTTCAGTTCTCCTGAAAAATATTTTCAATCAAACACCACTAGAAAGGAGTGTTTCACTTTACTCCTCTCTAATTGTGTATGGCTCGGGTTTTTGACAAGTAATGTTGAATTTAATAATGGATTCTAACAAGGAATCAACATCATTTACATAGGGGCCAAGTGGCATCAATTAGCTAACAGAAAATACATCTAAGTTTGAGGCTATGTATATTTCTCCTTTTGCCAAACTTTTGTTCGAGTTTTTAGAAATACAAAATAAGGAAGTTCATGATTTTTTTAGCTGTTTCCAATCTGTTGATCTCAGTTTTATTTACGGAATTGGATTACCTTTCCTTCTTTGCAAAATTCACTTGTTGGATCAAAGAGAGGAAATGATCATTTAAATTTCTGTTACCGTTTACTTCTCATTGCCTTAAAAGGGAATCTGTTCTCTAATTGCCATGAGTTATACTGCTAAATCTTCTGAAAATAGAATCTACATTATTGGAAAGAAATATTAAACGCTGGCATGAAAGCTCATCTTAGTGTAATTAATCACTTGATATTATAAGTGATTAAGGATTTATGCTTAGCTTTCATCCTGGATCGACAGCTAGTATTTTATAGTTGTGCATTGTTTCACTTCTCCTTCTGTAGGATACTCAGTTGGCTCATACTTCTCATAAAATAGTGTTCAGAAGATTATTTTCAGTTGATACTTGTCTCTTCGTGACAAAAAGTATGTCACCTTTGTCATGAGTATCATGGACTCTTGTTTAAACAAGTATTTATTTGTCTGCCTTGAGAACCTAGTTCTGTCATTATTTTCCTATCCATCTTGGATGTTATTAATAATTTGAGACAATTAGTGATATAGCTGGAATATTTCTTGTAACTGTCTTATCATTTTACTAGCCATTCTTGAAGTAGGTTACCATTGGGGACCAAAGGCAACACATGTACGTGGAATATCATTTACTTCAAGGGATAATACCAAAATAAAGGAAAATAAATGGAACCTACAAAGTTTCTATTTGACTCAACCATGATTTAATACATTTTCTCCTCTTTCATGCATAATTCTGGAAGTAATCTTTGAACGTTGTCTCTTTAACTAGCAGAGTAGTTTCACCACAGTTCTTTTCCTCTCTTTTTGTTATTTTGGTCCTTCTGTTTTGTCCTCATCATTTATGTTTGATGATTCTGTTAACTGAAGCCATGTAGTATTTGATCTAAATAGATTGAAATAATTCTACCATTGCTTTAAAAATTGCAAATAAACATTTCTCTTATCCTTCACTAACCCTTGTCTGTAATCTGCAGATATTTACTACAGTTGTCTTCTTCTCTTCATTTAATGAGATATCAGTGATGCCTCATCAGAACCAGGTATGATTGTCATCAGGGAATAGAGTGAATTGTGAAACAAATAGGAAATAATGCAATACTTGGGTAGAGTTTCAGTGAATATAATATCCCTTCTCTTATAAGGTAATTAGGGAATGAAAATCCTACATATGACAAGTAAGAAGAATCATTGGAAGGAATGAACAATATATGTCACATCCTAATTCTATTCTGTGATAAGGTTCCCTGGTTCATAAACTCTAAGCTGACTGGTCATATCTCTCTACCAAGAGAAAATAGGGAAAATACCATACTCTTAAGATTCTATAAACCCTTGATTGGTACATATACTTTTTAAGTTTGTAACTCTACCTGCTTTCTTAACCTAGTGATGGAGTTACCTAATGTGTTGAACCCCTGAAGGATCAAGGACCATAAATAGTTGGAACAAGTCATCATTGCCTTTTAAAAGCAAATATTTCAACTATTTATTTATTAGGACAAAATCAATTGAAAAAAAGAAACTTAAGAGTTCCATTATTTATGGTCAAATAGAAAAAGATAAAACCAAAATAACGGAGTTGCAATTGTGTACTCCTTGTTGTTATATCTTTAAGATGCAATGACTTTTTTTATGCCAACTCTGTTTTTAAAAATTACTTGGTTAGAGCTCCTTTATATGTATTCCTCTTCTTCGATTAACATGGAAGTAACAACAATACAGGGACAAAATGGGCAGCAGGGTATGTGGATGTACCAATGCATCCATTGTAAAAAAAACTTCCCTTCAAGCCAGGCCATAGCAGGCCATACAAAGGGTCATTTCAGAGATGGCTGGGTTAAAGGAACCCCCCAGAGCAAAGTATTTGTACTATTTTCTGAGTATCAGCAACAGCAGGGTTCTATCACTGACTCTTCAATTCCCGAGAAACAGATTTTTTCTGCAGCAACTTCTGACACTGACTTAGCAGATGCTCATCAATTGCAAATAGGTGATGTG</genome_strand>
        <mrna_strand>CCAAAATAAAATGGCGGTCTTCTCTATGATGCTTTGGCAGGACCTACAAAG...........................................................................................................................GTGTGTAAAGAAGACAACCCATTTGCCCAAAAGGAGAATAAATTAGCATGTGAGCTGAAGTTTCTGAAGAAATTGGCTTCGCTTGCCTTTATAACCCTCTTTCCCATTGTCAATTTCAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTTACTACAGTTGTCTTCTTCTCTTCATTTAATGAGATATCAGTGATGCCTCATCAGAACCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGACAAAATGGGCAGCAGGGTATGTGGATGTACCAATGCATCCATTGTAAAAAAAACTTCCCTTCAAGCCAGGCCATAGCAGGCCATACAAAGGGTCATTTCAGAGATGGCTGGGTTAAAGGAACCCCCCAGAGCAAAGTATTTGTACTATTTTCTGAGTATCAGCAACAGCAGGGTTCTATCACTGACTCTTCAATTCCCGAGAAACAGATTTTTTCTGCAGCAACTTCTGACACTGACTTAGCAGATGCTCATCAATTGCAAATAGGTGATGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0002K14-GUpky/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E322633" ref_strand="+" ref_description="SGN-E322633 [cTOB-26-O3]">
      <seq>tgatgctttggcaagacctacaaagctttgattgtttaggtgtgtaaagaagacaacccatttgcccaaaaggagaataaattagcatgtgagctgaagtttctgaagaaattggcttcgcttgcctttataaccctctttcccattgtcaatttcaagatatttactacagttgtcttcttctcttcatttaatgagatatcagtgatgcctcatcagaaccagggacaaaatgggcagcagggtatgtggatgtaccaatgcatccattgtaaaaaaaacttcccttcaagccaggccatagcaggccatacaaagggtcatttcagagatggctgggttaaaggaaccccccagagcaaagtatttgtactattttctgagtatcagcaacagcagggttctatcactgactcttcaattcccgagaaacagattttttctgcagcaacttctgacactgacttagcagatgctcatcaattgcaaataggtgatgtgcagaattccagaagcctggtcgtgcggcctccatctccagcttcgtctagcagagaaccacgaatccctaggcatcatttgaggcttcgtgatctgaagatactagctaggctaagggctcgtcttacagagaggagcaagaagtcattttgcgtcttcttgatagtgctat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0002K14-GUpky/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0002K14.1" temp_strand="+" temp_description="C02SLe0002K14.1  AC215442.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0002K14 sequenced_by:kribb upload_account_name:korea">
        <position start="8633" stop="18117"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="8933" g_stop="8957" g_length="25"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="25" r_length="25" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="8958" i_stop="9066" i_length="109">
            <donor d_prob="0.999" d_score="0.00"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="9067" g_stop="9200" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="26" r_stop="159" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="9201" i_stop="16620" i_length="7420">
            <donor d_prob="0.965" d_score="1.00"/>
            <acceptor a_prob="0.532" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="16621" g_stop="16686" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="160" r_stop="225" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="16687" i_stop="17368" i_length="682">
            <donor d_prob="0.856" d_score="1.00"/>
            <acceptor a_prob="0.936" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="17369" g_stop="17817" g_length="449"/>
          <reference_exon_boundary r_type="cDNA" r_start="226" r_stop="673" r_length="448" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0002K14.1" gen_strand="+" ref_id="SGN-E322633" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>674</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0002K14.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E322633" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="8933" e_stop="8957"/>
          <exon e_start="9067" e_stop="9200"/>
          <exon e_start="16621" e_stop="16686"/>
          <exon e_start="17369" e_stop="17817"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGATGCTTTGGCAAGACCTACAAAGGTAACGTATCCCTAATAAAACAGCAAAAAAATGCATTTTGTTTCTGTTATGCACAATTTCAGTTCTTAGTTTTCTCACTTCCTTTGTAATTTTTTGGGTATATAAGCAGCTTTGATTGTTTAGGTGTGTAAAGAAGACAACCCATTTGCCCAAAAGGAGAATAAATTAGCATGTGAGCTGAAGTTTCTGAAGAAATTGGCTTCGCTTGCCTTTATAACCCTCTTTCCCATTGTCAATTTCAAGGTAAAAGTACTGATAATTGGACTACTAATCTACATAATTGAAGAAAAAAAGGGGAAAAATGGTTCTTTTTTTTTTTTTTTGATTGCACTGAGATATACTGCTAAATCTTTATGTAATTGAGAATCTAGATTGTTGGGTATATAAGTATTGAATGCTAGCATGAAAATTCATGTTACTGTGATTCATTACTGGGTATCCATTTGGTTTGCTATATGTGGAGATTTTACTCTTCTTTTAGAATTATACATTATTTCAAGGATGTGAGGTTCTTACTTTAATTTTCCTCATGATTTATACCTGTATAAGTTAGAGGGAAGGAACTATGTATTATTTTATACAAGATTTTTTTAGAAAAAGATTTCATTTTTTGGAAAGACAGTGGTTGCAAGCAATCTATTAGGACCTTTGACCCTTTCTGGTAGATGATCAACATTGTGTACACCAGGATGGTCTTCCAAAGAAAAAGCTCACTTTGCTAGATTGTCTACGACCTAATTGGGTTCCTGATATCAATGAGTAAAGTTGCCTTTACGTGATCCACCAGGACAAAGATATCCTTAGTAATTGGATTGAGAGTGAGATTGCTAGTTTTCTTGCTCCTCAACGTATCTACCATAATCATAGAGTCAACATCAATAGTGTCCTGCCTCAAGCCATTGTCTTTCAAATTGCCCGGCATATTTGGCTGCTATGGCTTCGGCCGCATGATGATTGTTGCACTGTATTGGGAATTCCATCTTGCAGTTAGGAAAAGTTTTATCCACTAGATACTTTGAGGTACCACATAATATGCTGCTCCGTTCTCCGTGTAGAATCTGTTCTGGTTGCAGATCTACCAGCACATCTGCTTCTTCAATAGTTGCATTTTGGGCTCCCATATATAAGCTTGAAAATGAACATCTCCAATTTTCTCTCTAGACCATTGAGATAATCTCTGTCCCAGTTCTTTGAGCTTCTGTTGTAATCTCCACGTAGGATTACCCTCAATTTCTTGATCATTCAATACTCACTATCTCTTGGAAATCAGGTTGTGTTATCTAGAAATCCAGGAATTTGAAATACTTCATTCCAGTAGTTTGCTCATTATCACATTTCAGCAGCATGGGCTTATGATCAGAGCCAGCCCTGGGCAAGTGCCTCACAGTCTTGAAGTGGTCATCAGTGTTATTAAAGCAAAAATCACAAAAATCTCAAAGGATGGTGGTGCTTCAAGTGCAAATAAAATATGGACTTAGTGAAAATAGGCGCAAAGGGAGAAAAAGATACAAGTATATCACATATATCTAGTTCAAAACTAACAATTATAAGCATGAATGACAAATATATGAGCAATGAGATTGGAAAAAATTATGATAAAGTGAAATATCAATTGTTTAGTGTCACCTCTGTAGAAGATGTGCATTGAAAAGGGTTTCAGACCAATCAGATCAATTTGAGGGGTGTACATGACCATTTCTAAGCTGATCACTGAAAGATTGAAAATGGTTATAGGGAAGCTGGTTGGGATCAAATGGCATTCTTGAAAGGAAGATGAATCATGAATGCTGCTCTTCTGGCTAATGAAATGGTCGACTCTAGGGTAAAACAGAAGAAACCATGCATCATATACTAGCTAGATATTCAATAGGCTTATGATCATGTTAATTGGAATTTCTTGCTAAAAATTTTGATAGACATGGGCTTTGGAGAGAAATGGAATTGCTGGATACAGTTTTGCATCTCGAATGTAAGGTTCTCACTCATTATAAATGGTAAACCGGTTGGATTTTTTCAATCCCATAGAGGTCTTAGACAAGGAGACCCTATGTCGCCTTTTTTGTTCCTACTTACTATGGAGGGTCTGCACCACATGTTCAAGGTAAATAGTTGGGTAAAAGGATTCAATGCTCATATAGGGAGAGGTGAAGATCTTGAAATCAAACATCTTTTTTATGCAGATGATGCTCGGGTTTTTGTGAAGCAAAAGTGGACCAATTAGACACTTAAGAGCAATCCTTACAATATTTGAGGGCATTTTCAGGACTTTATGTTAACTAGTCGAAAAGTTTTCTCTTCCCAATTTATCAGGTAGACAATTAACAAAGTCTAGCTGAGAATCTGGGATGTCAGATAGCCTCTCGGCTTACAAAGTACCTAGGATTGTCTCTGGGGGGCCATGAACAAGGAGTTGGAGGCATGGAATCGAGGTGATGGAGAGATGTGTGAAAAGGCTATCAAGATGAAATAGTCAATACTTCCACTACGGGGTAGGTTGACTGTCATCAAGTCAGTTTTAGATGGGCAACCTATCTACATAATGAGCCTATTTCCAATACCCAAGAACACTATGAAGAGAATCAACAAAATGAGAAGATCCTTCATTTGGCAAGGAACAAAGAATAGAGAGGCTACAACCTGGTGAAATGGGAGATACTCACTTTGAGCAGAAAACAATGTGGCCTTGGCATGAGAAATCTTTGCATCCAGAATAAATGCTTGCTGTAAAAATGGCTATGGAGATTTTGTACGGGAGATAGAGCCCTATGGAGAAAATTCGCAGCAGAAAAATATGGCTTGTTTAGCAAATGGACTACTGAGAAGGTGAAGGGGTCGTTTCAATGCTGTGGGTGGAAGTCCGTTAAGAAGGCTGTGGCCACAGTTTAATAACAATATCTATACTAATGTGGGAAATGGTCTGAAAACATATTTCTGAAATGAAATCTGGAAAGGGTATGATAGCCCAATGAACTTATTCCCAAACCTCTACACCCTGAGCTTACAAAGATTTGCTACTGTTGCTCAAGTATGGAGCCAACAAGAGTAGAACTTAGTGTTCAGGAGGGCTTCTGAATGGATGGGATGTGGGCGGGCTACTTGAGGTTCTTAACACCCCACCAGCCATGTCTCAAAGAAAGGATAAACGAATTTGGAAGCTACATAACATAGGAATGTCATAGTTAAATCTTGCTAAATCTTGCTACTGGTAATGAATGTTAATCAGTCGATACTAACAAGTGGCCTTGGAAGCTAGTGTGGAAGACGAGAAACCCATTAAAAGTAGCATGTTTTGCGTGGTTGGTCATAAGAAAAGTTTGCCTTACCCATGAGGCATTACAAAAAAGGGGATGCAGTTTTTTTTTTTGAAACTGAAAAGGGGGGGGGGGGATGCAGTTTTGCTCAAGATGCTTATGTGTGAGTAGAAAGCTGAAGTAAATAATCATTTGTTCATTCATGGTATAGCAGCTTCAAAATTGTGGAATATGTGGAGAGAGGTGATTAGGGCAAAATTTGAAATGGAGAAAAGGTGGATGACAAAGATGGTAACTACACCATATGAATATGGTATCTGGAGATCAGTAAGAAATCTTTGGGCTCGTTTCGTTCTAGAATCAGATTCCAGTTGGGTAATGGAATGAAGGTGTCATTTTGGGAGGACAAATGGATAGCCCAAAGAATCCTGAAACTATTATTCCCGGACTTATGTACACTGAGCTTGCAACAAATGCAACTCTGGCTGAAATGTGGACAGGACAGGGGTGGAACTTACATCTTAGGAAGAATTTAAATGATTGGGAGATGGGGAACATTGTGACCTTCCATGATACAATGGCACAATTTAGTACTCTGAGTAGGGAAGAAGACAAGGTTGTGTGGAAATCGACAGCAAAGGGGTCTTCAGTGTCAAGTCAGCTTACAAAGATCTCCATCATTCAAATTCAAATGACAGGATGGAGCTCTGGCCATGGCAGATGATAAAATCCCATACAAGGTAAACTGCTTCACATGGTTACTAGCAAAGGAAGCAGTGCTGTCACAAGAAAATATAAAGAAGAGGAAGTTCCAACTATGTTCAAGATTCTATTGTGTGAGGAACAGGCAGAGATAGTTGACCATCTCTTTCTGCATTGCAAATGGACAAATCAATTATGGAGAATATTCAGCAGCCTTAGGAAGATCACTTGGGTGAAACCAAGAAAAATAGCACAACTCCTAAATTGTTGGATCAATATAGGCAACACTACAATTAAGGAGGAGAGATGGAGGATTGTCCCAGCTTGTATATGGTGGACAGTGTGGAAAGAAAGGAATCAAAGAAGTTTTGAGGGCAAGAAGAACAATTTGCAGAATTTTAAGATGAATTGTATAGCTCTTTATTGTTTTTGGTGTAAACAGAAAGTTTTAGTACAGTCAGAAGAACTTTTTGATGTTATAGATTATTTGTGACAAAAAGAACAGATGGAGTCAGTCTAGTTTGTAATACTTTTGGAGGGGGGCTACTTTGATGTAGTATACCTGTGGATAAATAGGAAAAAAAGGTTATCATTCTCAAAAAAAAGTATACTAGGGGTTAGCTGGGTGATGCCAAGGACAACCATTGAGCTCTTTAATAGCCGGACAAGAATTGGCAGCAGAGGGAAAAGTGAAGACTGGTGGACGACTATCCCCCTGAATATTGGGGACCCTATGGTAAAAGAAAGGAATGCTAGGTGTTTTAAAGGACAAAATGATAGTTTTGATTTCTCTGAATATATGGACTCTTGTGGCGTGGTTGATATTGGGTAAACAGGTCCTAAATACAGAAGGTGCAACAACTGGACATCTAGCAAAAGGATATGGAAAAGGCTGAACAGAGTATTCATTAATAGCTTATGGGCTCAGAATTCAATCAGCGTCATCGAAGGTGCGCTAAGCACGCTTAGGCCCTGAAGCCGTCTTTGTTGGAACCATCCGTCCGTAGCTGATCATTTTTATCCGCACATTTGTTGTCATCAGCCATCCTTTTTTCCTTAGTACAATTTATCTAAGCTTGATCAGCAACTATAGCATTCTTTCCAGTAGGAACCCTCTTCTCTGCCCTCTTCTGTTCTAATTCTCTACGTTGAGTTATTGAGTGCCCCAAGATTTTGCAATTTCTACAAAATTTAGTTACTATAGGAGAGTCCTCATTGGTACTGCAATTTATTTTACGCAATTCCATCCGTGACAGTGGAATGGAGTTCCAGCAAAAGCACCCAGATAGGGACTACAGGAGATTCCTCATCTGATCTGAATGGTGGAGTGCATTTCTCTAGCCACATCACTTGACCGTCTATTTGAATAGATCGGTTATACCAAACATTTTTTAAATCTTCCTCATTGGAAAAATCTATAAACATAACGCAAAAATCGTAAACTCAAATCTTAACTTCACCTCTGATAAATTTGTGGCCTAGTCATGAATTTACCCACCAGAGTTAGTTTCACTCTTCAGCAGTAATTCCATAGTAATCGCTTGATTTGAAAATGATTGTCGGCATGCAATTGTTAGTATCATAACCAGCTTTCACTTGTGGATTCCCAAGTCGCTGGTTTCTAGGCTTGGGATAGCACTTAACGGTCGATTGAATTGCTTCAGAATGTTAGATTTCTGTGGAATTTCCTCCACAGCTAAGGTCACCATAGTAGTATCAATGTTTTTATCTACCAGTGGCGCCGTGCCAGGTCTACTGGTGTCCCATTGGACGGAGTGTGAGGCTCAATCACGAGAGAAAACAACCGTTGAGAAATAATACTCATGTATTGTATGGAAAACTTTTTCTGTTTACTTATTTTTATACGGCATAGAATGTGAAATAAGAACAAGGGTAAGTCATACATGGATAAATAAACTAAAGGTGAAGTGACCCTTATGATAGTAAAGAAACTTTTATTTTGGTTAACAAGTAACATATATTTCTCTCTCTGTCGAATACTCAGTTGACTCATACTAGTCTCATACAATAATGTTAAGTAAAGTGTTTTTTATTGATACTTCTTCAGAGCAAAAAGAAAGTTGTCTCTGTCATGAGCAGATATGGGTAAATTCATGTGGAAACAAGTTTTCATCTGTCTGGCTTGGAAAATGATAAACATTTCAGGATCTCATCTTTTCCACGATCTTGGCCAGAGGACTTGGAATTAAATTATTCTGAAGAAGCCACATAAATGATACAATTGAACCTACTTTGTCTACTTCATGATTAGACACTATCTGAACTTTTTGTGCTACAACTAGAAGAGCTAATGGAGATTCTACATAGAAACTCAGTAAAAAACAAATTTTTGGCTGAGTTGTACATTTTACAAGGCATTAGTCTTTTTTTTCTAAAAAAGTTGTTATTTTCAGTTCTCCTGAAAAATATTTTCAATCAAACACCACTAGAAAGGAGTGTTTCACTTTACTCCTCTCTAATTGTGTATGGCTCGGGTTTTTGACAAGTAATGTTGAATTTAATAATGGATTCTAACAAGGAATCAACATCATTTACATAGGGGCCAAGTGGCATCAATTAGCTAACAGAAAATACATCTAAGTTTGAGGCTATGTATATTTCTCCTTTTGCCAAACTTTTGTTCGAGTTTTTAGAAATACAAAATAAGGAAGTTCATGATTTTTTTAGCTGTTTCCAATCTGTTGATCTCAGTTTTATTTACGGAATTGGATTACCTTTCCTTCTTTGCAAAATTCACTTGTTGGATCAAAGAGAGGAAATGATCATTTAAATTTCTGTTACCGTTTACTTCTCATTGCCTTAAAAGGGAATCTGTTCTCTAATTGCCATGAGTTATACTGCTAAATCTTCTGAAAATAGAATCTACATTATTGGAAAGAAATATTAAACGCTGGCATGAAAGCTCATCTTAGTGTAATTAATCACTTGATATTATAAGTGATTAAGGATTTATGCTTAGCTTTCATCCTGGATCGACAGCTAGTATTTTATAGTTGTGCATTGTTTCACTTCTCCTTCTGTAGGATACTCAGTTGGCTCATACTTCTCATAAAATAGTGTTCAGAAGATTATTTTCAGTTGATACTTGTCTCTTCGTGACAAAAAGTATGTCACCTTTGTCATGAGTATCATGGACTCTTGTTTAAACAAGTATTTATTTGTCTGCCTTGAGAACCTAGTTCTGTCATTATTTTCCTATCCATCTTGGATGTTATTAATAATTTGAGACAATTAGTGATATAGCTGGAATATTTCTTGTAACTGTCTTATCATTTTACTAGCCATTCTTGAAGTAGGTTACCATTGGGGACCAAAGGCAACACATGTACGTGGAATATCATTTACTTCAAGGGATAATACCAAAATAAAGGAAAATAAATGGAACCTACAAAGTTTCTATTTGACTCAACCATGATTTAATACATTTTCTCCTCTTTCATGCATAATTCTGGAAGTAATCTTTGAACGTTGTCTCTTTAACTAGCAGAGTAGTTTCACCACAGTTCTTTTCCTCTCTTTTTGTTATTTTGGTCCTTCTGTTTTGTCCTCATCATTTATGTTTGATGATTCTGTTAACTGAAGCCATGTAGTATTTGATCTAAATAGATTGAAATAATTCTACCATTGCTTTAAAAATTGCAAATAAACATTTCTCTTATCCTTCACTAACCCTTGTCTGTAATCTGCAGATATTTACTACAGTTGTCTTCTTCTCTTCATTTAATGAGATATCAGTGATGCCTCATCAGAACCAGGTATGATTGTCATCAGGGAATAGAGTGAATTGTGAAACAAATAGGAAATAATGCAATACTTGGGTAGAGTTTCAGTGAATATAATATCCCTTCTCTTATAAGGTAATTAGGGAATGAAAATCCTACATATGACAAGTAAGAAGAATCATTGGAAGGAATGAACAATATATGTCACATCCTAATTCTATTCTGTGATAAGGTTCCCTGGTTCATAAACTCTAAGCTGACTGGTCATATCTCTCTACCAAGAGAAAATAGGGAAAATACCATACTCTTAAGATTCTATAAACCCTTGATTGGTACATATACTTTTTAAGTTTGTAACTCTACCTGCTTTCTTAACCTAGTGATGGAGTTACCTAATGTGTTGAACCCCTGAAGGATCAAGGACCATAAATAGTTGGAACAAGTCATCATTGCCTTTTAAAAGCAAATATTTCAACTATTTATTTATTAGGACAAAATCAATTGAAAAAAAGAAACTTAAGAGTTCCATTATTTATGGTCAAATAGAAAAAGATAAAACCAAAATAACGGAGTTGCAATTGTGTACTCCTTGTTGTTATATCTTTAAGATGCAATGACTTTTTTTATGCCAACTCTGTTTTTAAAAATTACTTGGTTAGAGCTCCTTTATATGTATTCCTCTTCTTCGATTAACATGGAAGTAACAACAATACAGGGACAAAATGGGCAGCAGGGTATGTGGATGTACCAATGCATCCATTGTAAAAAAAACTTCCCTTCAAGCCAGGCCATAGCAGGCCATACAAAGGGTCATTTCAGAGATGGCTGGGTTAAAGGAACCCCCCAGAGCAAAGTATTTGTACTATTTTCTGAGTATCAGCAACAGCAGGGTTCTATCACTGACTCTTCAATTCCCGAGAAACAGATTTTTTCTGCAGCAACTTCTGACACTGACTTAGCAGATGCTCATCAATTGCAAATAGGTGATGTGCAGAATTCCAGAAGCCTGGTCGTGCGGCCTCCATCTCCAGCTTCGTCTAGCAGAGAACCACGAATCCCTAGGCATCATTTGAGGCTTCGTGATCTGAAGATACTAGCTAGGCTAAGGGCTCGTCTTACCAGAGAGGAGCAAGAAGTCATTTTGCGTCTTCTTGATAGTGCTAT</genome_strand>
        <mrna_strand>TGATGCTTTGGCAAGACCTACAAAG.............................................................................................................CTTTGATTGTTTAGGTGTGTAAAGAAGACAACCCATTTGCCCAAAAGGAGAATAAATTAGCATGTGAGCTGAAGTTTCTGAAGAAATTGGCTTCGCTTGCCTTTATAACCCTCTTTCCCATTGTCAATTTCAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTTACTACAGTTGTCTTCTTCTCTTCATTTAATGAGATATCAGTGATGCCTCATCAGAACCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGACAAAATGGGCAGCAGGGTATGTGGATGTACCAATGCATCCATTGTAAAAAAAACTTCCCTTCAAGCCAGGCCATAGCAGGCCATACAAAGGGTCATTTCAGAGATGGCTGGGTTAAAGGAACCCCCCAGAGCAAAGTATTTGTACTATTTTCTGAGTATCAGCAACAGCAGGGTTCTATCACTGACTCTTCAATTCCCGAGAAACAGATTTTTTCTGCAGCAACTTCTGACACTGACTTAGCAGATGCTCATCAATTGCAAATAGGTGATGTGCAGAATTCCAGAAGCCTGGTCGTGCGGCCTCCATCTCCAGCTTCGTCTAGCAGAGAACCACGAATCCCTAGGCATCATTTGAGGCTTCGTGATCTGAAGATACTAGCTAGGCTAAGGGCTCGTCTTA-CAGAGAGGAGCAAGAAGTCATTTTGCGTCTTCTTGATAGTGCTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0002K14-GUpky/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E560550" ref_strand="+" ref_description="SGN-E560550 [20221]">
      <seq>tgctttggcaagactacaaaggtgtataaagaagacaacccatttgcccaaaaggaaaacaaattagcatgtgagctgaagtttctgaagaaattggcttcgcttgcctttatagccctctttcccattgtcaatttccagatatttactacagttgtcttcttctcttcatttaatgagatatcagtgatgcctcatcagaatcagggacaaaatgggcagcagggtgtgtggatgtaccaatgcatccattgtaaaaaaaacttcccttcaagccaggccatagcaggccatacaaagggtcatttcagagatggctgggttaaaggaaccccccagagcaaagtatttgtactattttctgagtatcagcagcagcagggttctattactgactcttcaattcccgagaaacatgttttttctgcagcaacatctgacactgacttaacagatgctcatcgattgccaataggtgatgtgcagaattccagaagcctggtcgtacggcctccatctccagcttcgtctagcagacaaccacgaatccctaggcatcatttgaggcttcgtgatctgaagatactagctaggctaagggctcgtcttaccagagaggagcaagaagtcattttgcgtcttcttgatagtgctatggaacaggcaaaacaatcaagcaagaagagcactgaggcgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0002K14-GUpky/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0002K14.1" temp_strand="+" temp_description="C02SLe0002K14.1  AC215442.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0002K14 sequenced_by:kribb upload_account_name:korea">
        <position start="8779" stop="18788"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="8936" g_stop="8957" g_length="22"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="21" r_length="21" r_score="0.955"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="8958" i_stop="9080" i_length="123">
            <donor d_prob="0.999" d_score="0.00"/>
            <acceptor a_prob="0.951" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="9081" g_stop="9200" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="22" r_stop="141" r_length="120" r_score="0.958"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="9201" i_stop="16620" i_length="7420">
            <donor d_prob="0.965" d_score="0.96"/>
            <acceptor a_prob="0.532" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="16621" g_stop="16686" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="142" r_stop="207" r_length="66" r_score="0.985"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="16687" i_stop="17368" i_length="682">
            <donor d_prob="0.856" d_score="0.98"/>
            <acceptor a_prob="0.936" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="17369" g_stop="17824" g_length="456"/>
          <reference_exon_boundary r_type="cDNA" r_start="208" r_stop="663" r_length="456" r_score="0.976"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="17825" i_stop="18454" i_length="630">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.988" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="18455" g_stop="18488" g_length="34"/>
          <reference_exon_boundary r_type="cDNA" r_start="664" r_stop="697" r_length="34" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0002K14.1" gen_strand="+" ref_id="SGN-E560550" ref_strand="+">
        <total_alignment_score>0.974</total_alignment_score>
        <cumulative_length_of_scored_exons>698</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0002K14.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E560550" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="8936" e_stop="8957"/>
          <exon e_start="9081" e_stop="9200"/>
          <exon e_start="16621" e_stop="16686"/>
          <exon e_start="17369" e_stop="17824"/>
          <exon e_start="18455" e_stop="18488"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCTTTGGCAAGACCTACAAAGGTAACGTATCCCTAATAAAACAGCAAAAAAATGCATTTTGTTTCTGTTATGCACAATTTCAGTTCTTAGTTTTCTCACTTCCTTTGTAATTTTTTGGGTATATAAGCAGCTTTGATTGTTTAGGTGTGTAAAGAAGACAACCCATTTGCCCAAAAGGAGAATAAATTAGCATGTGAGCTGAAGTTTCTGAAGAAATTGGCTTCGCTTGCCTTTATAACCCTCTTTCCCATTGTCAATTTCAAGGTAAAAGTACTGATAATTGGACTACTAATCTACATAATTGAAGAAAAAAAGGGGAAAAATGGTTCTTTTTTTTTTTTTTTGATTGCACTGAGATATACTGCTAAATCTTTATGTAATTGAGAATCTAGATTGTTGGGTATATAAGTATTGAATGCTAGCATGAAAATTCATGTTACTGTGATTCATTACTGGGTATCCATTTGGTTTGCTATATGTGGAGATTTTACTCTTCTTTTAGAATTATACATTATTTCAAGGATGTGAGGTTCTTACTTTAATTTTCCTCATGATTTATACCTGTATAAGTTAGAGGGAAGGAACTATGTATTATTTTATACAAGATTTTTTTAGAAAAAGATTTCATTTTTTGGAAAGACAGTGGTTGCAAGCAATCTATTAGGACCTTTGACCCTTTCTGGTAGATGATCAACATTGTGTACACCAGGATGGTCTTCCAAAGAAAAAGCTCACTTTGCTAGATTGTCTACGACCTAATTGGGTTCCTGATATCAATGAGTAAAGTTGCCTTTACGTGATCCACCAGGACAAAGATATCCTTAGTAATTGGATTGAGAGTGAGATTGCTAGTTTTCTTGCTCCTCAACGTATCTACCATAATCATAGAGTCAACATCAATAGTGTCCTGCCTCAAGCCATTGTCTTTCAAATTGCCCGGCATATTTGGCTGCTATGGCTTCGGCCGCATGATGATTGTTGCACTGTATTGGGAATTCCATCTTGCAGTTAGGAAAAGTTTTATCCACTAGATACTTTGAGGTACCACATAATATGCTGCTCCGTTCTCCGTGTAGAATCTGTTCTGGTTGCAGATCTACCAGCACATCTGCTTCTTCAATAGTTGCATTTTGGGCTCCCATATATAAGCTTGAAAATGAACATCTCCAATTTTCTCTCTAGACCATTGAGATAATCTCTGTCCCAGTTCTTTGAGCTTCTGTTGTAATCTCCACGTAGGATTACCCTCAATTTCTTGATCATTCAATACTCACTATCTCTTGGAAATCAGGTTGTGTTATCTAGAAATCCAGGAATTTGAAATACTTCATTCCAGTAGTTTGCTCATTATCACATTTCAGCAGCATGGGCTTATGATCAGAGCCAGCCCTGGGCAAGTGCCTCACAGTCTTGAAGTGGTCATCAGTGTTATTAAAGCAAAAATCACAAAAATCTCAAAGGATGGTGGTGCTTCAAGTGCAAATAAAATATGGACTTAGTGAAAATAGGCGCAAAGGGAGAAAAAGATACAAGTATATCACATATATCTAGTTCAAAACTAACAATTATAAGCATGAATGACAAATATATGAGCAATGAGATTGGAAAAAATTATGATAAAGTGAAATATCAATTGTTTAGTGTCACCTCTGTAGAAGATGTGCATTGAAAAGGGTTTCAGACCAATCAGATCAATTTGAGGGGTGTACATGACCATTTCTAAGCTGATCACTGAAAGATTGAAAATGGTTATAGGGAAGCTGGTTGGGATCAAATGGCATTCTTGAAAGGAAGATGAATCATGAATGCTGCTCTTCTGGCTAATGAAATGGTCGACTCTAGGGTAAAACAGAAGAAACCATGCATCATATACTAGCTAGATATTCAATAGGCTTATGATCATGTTAATTGGAATTTCTTGCTAAAAATTTTGATAGACATGGGCTTTGGAGAGAAATGGAATTGCTGGATACAGTTTTGCATCTCGAATGTAAGGTTCTCACTCATTATAAATGGTAAACCGGTTGGATTTTTTCAATCCCATAGAGGTCTTAGACAAGGAGACCCTATGTCGCCTTTTTTGTTCCTACTTACTATGGAGGGTCTGCACCACATGTTCAAGGTAAATAGTTGGGTAAAAGGATTCAATGCTCATATAGGGAGAGGTGAAGATCTTGAAATCAAACATCTTTTTTATGCAGATGATGCTCGGGTTTTTGTGAAGCAAAAGTGGACCAATTAGACACTTAAGAGCAATCCTTACAATATTTGAGGGCATTTTCAGGACTTTATGTTAACTAGTCGAAAAGTTTTCTCTTCCCAATTTATCAGGTAGACAATTAACAAAGTCTAGCTGAGAATCTGGGATGTCAGATAGCCTCTCGGCTTACAAAGTACCTAGGATTGTCTCTGGGGGGCCATGAACAAGGAGTTGGAGGCATGGAATCGAGGTGATGGAGAGATGTGTGAAAAGGCTATCAAGATGAAATAGTCAATACTTCCACTACGGGGTAGGTTGACTGTCATCAAGTCAGTTTTAGATGGGCAACCTATCTACATAATGAGCCTATTTCCAATACCCAAGAACACTATGAAGAGAATCAACAAAATGAGAAGATCCTTCATTTGGCAAGGAACAAAGAATAGAGAGGCTACAACCTGGTGAAATGGGAGATACTCACTTTGAGCAGAAAACAATGTGGCCTTGGCATGAGAAATCTTTGCATCCAGAATAAATGCTTGCTGTAAAAATGGCTATGGAGATTTTGTACGGGAGATAGAGCCCTATGGAGAAAATTCGCAGCAGAAAAATATGGCTTGTTTAGCAAATGGACTACTGAGAAGGTGAAGGGGTCGTTTCAATGCTGTGGGTGGAAGTCCGTTAAGAAGGCTGTGGCCACAGTTTAATAACAATATCTATACTAATGTGGGAAATGGTCTGAAAACATATTTCTGAAATGAAATCTGGAAAGGGTATGATAGCCCAATGAACTTATTCCCAAACCTCTACACCCTGAGCTTACAAAGATTTGCTACTGTTGCTCAAGTATGGAGCCAACAAGAGTAGAACTTAGTGTTCAGGAGGGCTTCTGAATGGATGGGATGTGGGCGGGCTACTTGAGGTTCTTAACACCCCACCAGCCATGTCTCAAAGAAAGGATAAACGAATTTGGAAGCTACATAACATAGGAATGTCATAGTTAAATCTTGCTAAATCTTGCTACTGGTAATGAATGTTAATCAGTCGATACTAACAAGTGGCCTTGGAAGCTAGTGTGGAAGACGAGAAACCCATTAAAAGTAGCATGTTTTGCGTGGTTGGTCATAAGAAAAGTTTGCCTTACCCATGAGGCATTACAAAAAAGGGGATGCAGTTTTTTTTTTTGAAACTGAAAAGGGGGGGGGGGGATGCAGTTTTGCTCAAGATGCTTATGTGTGAGTAGAAAGCTGAAGTAAATAATCATTTGTTCATTCATGGTATAGCAGCTTCAAAATTGTGGAATATGTGGAGAGAGGTGATTAGGGCAAAATTTGAAATGGAGAAAAGGTGGATGACAAAGATGGTAACTACACCATATGAATATGGTATCTGGAGATCAGTAAGAAATCTTTGGGCTCGTTTCGTTCTAGAATCAGATTCCAGTTGGGTAATGGAATGAAGGTGTCATTTTGGGAGGACAAATGGATAGCCCAAAGAATCCTGAAACTATTATTCCCGGACTTATGTACACTGAGCTTGCAACAAATGCAACTCTGGCTGAAATGTGGACAGGACAGGGGTGGAACTTACATCTTAGGAAGAATTTAAATGATTGGGAGATGGGGAACATTGTGACCTTCCATGATACAATGGCACAATTTAGTACTCTGAGTAGGGAAGAAGACAAGGTTGTGTGGAAATCGACAGCAAAGGGGTCTTCAGTGTCAAGTCAGCTTACAAAGATCTCCATCATTCAAATTCAAATGACAGGATGGAGCTCTGGCCATGGCAGATGATAAAATCCCATACAAGGTAAACTGCTTCACATGGTTACTAGCAAAGGAAGCAGTGCTGTCACAAGAAAATATAAAGAAGAGGAAGTTCCAACTATGTTCAAGATTCTATTGTGTGAGGAACAGGCAGAGATAGTTGACCATCTCTTTCTGCATTGCAAATGGACAAATCAATTATGGAGAATATTCAGCAGCCTTAGGAAGATCACTTGGGTGAAACCAAGAAAAATAGCACAACTCCTAAATTGTTGGATCAATATAGGCAACACTACAATTAAGGAGGAGAGATGGAGGATTGTCCCAGCTTGTATATGGTGGACAGTGTGGAAAGAAAGGAATCAAAGAAGTTTTGAGGGCAAGAAGAACAATTTGCAGAATTTTAAGATGAATTGTATAGCTCTTTATTGTTTTTGGTGTAAACAGAAAGTTTTAGTACAGTCAGAAGAACTTTTTGATGTTATAGATTATTTGTGACAAAAAGAACAGATGGAGTCAGTCTAGTTTGTAATACTTTTGGAGGGGGGCTACTTTGATGTAGTATACCTGTGGATAAATAGGAAAAAAAGGTTATCATTCTCAAAAAAAAGTATACTAGGGGTTAGCTGGGTGATGCCAAGGACAACCATTGAGCTCTTTAATAGCCGGACAAGAATTGGCAGCAGAGGGAAAAGTGAAGACTGGTGGACGACTATCCCCCTGAATATTGGGGACCCTATGGTAAAAGAAAGGAATGCTAGGTGTTTTAAAGGACAAAATGATAGTTTTGATTTCTCTGAATATATGGACTCTTGTGGCGTGGTTGATATTGGGTAAACAGGTCCTAAATACAGAAGGTGCAACAACTGGACATCTAGCAAAAGGATATGGAAAAGGCTGAACAGAGTATTCATTAATAGCTTATGGGCTCAGAATTCAATCAGCGTCATCGAAGGTGCGCTAAGCACGCTTAGGCCCTGAAGCCGTCTTTGTTGGAACCATCCGTCCGTAGCTGATCATTTTTATCCGCACATTTGTTGTCATCAGCCATCCTTTTTTCCTTAGTACAATTTATCTAAGCTTGATCAGCAACTATAGCATTCTTTCCAGTAGGAACCCTCTTCTCTGCCCTCTTCTGTTCTAATTCTCTACGTTGAGTTATTGAGTGCCCCAAGATTTTGCAATTTCTACAAAATTTAGTTACTATAGGAGAGTCCTCATTGGTACTGCAATTTATTTTACGCAATTCCATCCGTGACAGTGGAATGGAGTTCCAGCAAAAGCACCCAGATAGGGACTACAGGAGATTCCTCATCTGATCTGAATGGTGGAGTGCATTTCTCTAGCCACATCACTTGACCGTCTATTTGAATAGATCGGTTATACCAAACATTTTTTAAATCTTCCTCATTGGAAAAATCTATAAACATAACGCAAAAATCGTAAACTCAAATCTTAACTTCACCTCTGATAAATTTGTGGCCTAGTCATGAATTTACCCACCAGAGTTAGTTTCACTCTTCAGCAGTAATTCCATAGTAATCGCTTGATTTGAAAATGATTGTCGGCATGCAATTGTTAGTATCATAACCAGCTTTCACTTGTGGATTCCCAAGTCGCTGGTTTCTAGGCTTGGGATAGCACTTAACGGTCGATTGAATTGCTTCAGAATGTTAGATTTCTGTGGAATTTCCTCCACAGCTAAGGTCACCATAGTAGTATCAATGTTTTTATCTACCAGTGGCGCCGTGCCAGGTCTACTGGTGTCCCATTGGACGGAGTGTGAGGCTCAATCACGAGAGAAAACAACCGTTGAGAAATAATACTCATGTATTGTATGGAAAACTTTTTCTGTTTACTTATTTTTATACGGCATAGAATGTGAAATAAGAACAAGGGTAAGTCATACATGGATAAATAAACTAAAGGTGAAGTGACCCTTATGATAGTAAAGAAACTTTTATTTTGGTTAACAAGTAACATATATTTCTCTCTCTGTCGAATACTCAGTTGACTCATACTAGTCTCATACAATAATGTTAAGTAAAGTGTTTTTTATTGATACTTCTTCAGAGCAAAAAGAAAGTTGTCTCTGTCATGAGCAGATATGGGTAAATTCATGTGGAAACAAGTTTTCATCTGTCTGGCTTGGAAAATGATAAACATTTCAGGATCTCATCTTTTCCACGATCTTGGCCAGAGGACTTGGAATTAAATTATTCTGAAGAAGCCACATAAATGATACAATTGAACCTACTTTGTCTACTTCATGATTAGACACTATCTGAACTTTTTGTGCTACAACTAGAAGAGCTAATGGAGATTCTACATAGAAACTCAGTAAAAAACAAATTTTTGGCTGAGTTGTACATTTTACAAGGCATTAGTCTTTTTTTTCTAAAAAAGTTGTTATTTTCAGTTCTCCTGAAAAATATTTTCAATCAAACACCACTAGAAAGGAGTGTTTCACTTTACTCCTCTCTAATTGTGTATGGCTCGGGTTTTTGACAAGTAATGTTGAATTTAATAATGGATTCTAACAAGGAATCAACATCATTTACATAGGGGCCAAGTGGCATCAATTAGCTAACAGAAAATACATCTAAGTTTGAGGCTATGTATATTTCTCCTTTTGCCAAACTTTTGTTCGAGTTTTTAGAAATACAAAATAAGGAAGTTCATGATTTTTTTAGCTGTTTCCAATCTGTTGATCTCAGTTTTATTTACGGAATTGGATTACCTTTCCTTCTTTGCAAAATTCACTTGTTGGATCAAAGAGAGGAAATGATCATTTAAATTTCTGTTACCGTTTACTTCTCATTGCCTTAAAAGGGAATCTGTTCTCTAATTGCCATGAGTTATACTGCTAAATCTTCTGAAAATAGAATCTACATTATTGGAAAGAAATATTAAACGCTGGCATGAAAGCTCATCTTAGTGTAATTAATCACTTGATATTATAAGTGATTAAGGATTTATGCTTAGCTTTCATCCTGGATCGACAGCTAGTATTTTATAGTTGTGCATTGTTTCACTTCTCCTTCTGTAGGATACTCAGTTGGCTCATACTTCTCATAAAATAGTGTTCAGAAGATTATTTTCAGTTGATACTTGTCTCTTCGTGACAAAAAGTATGTCACCTTTGTCATGAGTATCATGGACTCTTGTTTAAACAAGTATTTATTTGTCTGCCTTGAGAACCTAGTTCTGTCATTATTTTCCTATCCATCTTGGATGTTATTAATAATTTGAGACAATTAGTGATATAGCTGGAATATTTCTTGTAACTGTCTTATCATTTTACTAGCCATTCTTGAAGTAGGTTACCATTGGGGACCAAAGGCAACACATGTACGTGGAATATCATTTACTTCAAGGGATAATACCAAAATAAAGGAAAATAAATGGAACCTACAAAGTTTCTATTTGACTCAACCATGATTTAATACATTTTCTCCTCTTTCATGCATAATTCTGGAAGTAATCTTTGAACGTTGTCTCTTTAACTAGCAGAGTAGTTTCACCACAGTTCTTTTCCTCTCTTTTTGTTATTTTGGTCCTTCTGTTTTGTCCTCATCATTTATGTTTGATGATTCTGTTAACTGAAGCCATGTAGTATTTGATCTAAATAGATTGAAATAATTCTACCATTGCTTTAAAAATTGCAAATAAACATTTCTCTTATCCTTCACTAACCCTTGTCTGTAATCTGCAGATATTTACTACAGTTGTCTTCTTCTCTTCATTTAATGAGATATCAGTGATGCCTCATCAGAACCAGGTATGATTGTCATCAGGGAATAGAGTGAATTGTGAAACAAATAGGAAATAATGCAATACTTGGGTAGAGTTTCAGTGAATATAATATCCCTTCTCTTATAAGGTAATTAGGGAATGAAAATCCTACATATGACAAGTAAGAAGAATCATTGGAAGGAATGAACAATATATGTCACATCCTAATTCTATTCTGTGATAAGGTTCCCTGGTTCATAAACTCTAAGCTGACTGGTCATATCTCTCTACCAAGAGAAAATAGGGAAAATACCATACTCTTAAGATTCTATAAACCCTTGATTGGTACATATACTTTTTAAGTTTGTAACTCTACCTGCTTTCTTAACCTAGTGATGGAGTTACCTAATGTGTTGAACCCCTGAAGGATCAAGGACCATAAATAGTTGGAACAAGTCATCATTGCCTTTTAAAAGCAAATATTTCAACTATTTATTTATTAGGACAAAATCAATTGAAAAAAAGAAACTTAAGAGTTCCATTATTTATGGTCAAATAGAAAAAGATAAAACCAAAATAACGGAGTTGCAATTGTGTACTCCTTGTTGTTATATCTTTAAGATGCAATGACTTTTTTTATGCCAACTCTGTTTTTAAAAATTACTTGGTTAGAGCTCCTTTATATGTATTCCTCTTCTTCGATTAACATGGAAGTAACAACAATACAGGGACAAAATGGGCAGCAGGGTATGTGGATGTACCAATGCATCCATTGTAAAAAAAACTTCCCTTCAAGCCAGGCCATAGCAGGCCATACAAAGGGTCATTTCAGAGATGGCTGGGTTAAAGGAACCCCCCAGAGCAAAGTATTTGTACTATTTTCTGAGTATCAGCAACAGCAGGGTTCTATCACTGACTCTTCAATTCCCGAGAAACAGATTTTTTCTGCAGCAACTTCTGACACTGACTTAGCAGATGCTCATCAATTGCAAATAGGTGATGTGCAGAATTCCAGAAGCCTGGTCGTGCGGCCTCCATCTCCAGCTTCGTCTAGCAGAGAACCACGAATCCCTAGGCATCATTTGAGGCTTCGTGATCTGAAGATACTAGCTAGGCTAAGGGCTCGTCTTACCAGAGAGGAGCAAGAAGTCATTTTGCGTCTTCTTGATAGTGCTATGGAACAGGTTCATTCATTAATTTAAATATGCACCTGCTCGATCTTTTTCCTTCCTTCATCACTCCTATAATTTTCTTAGGTGTCATTTGGTTCAAAACTAGGGATTATATCAATCCCACTTTTTTAGGAGACGAGTGATTCCAGGATTTTGGTATAGAAATAACAGTGATCTTAGGTAATACTTCCGGTCAAATACGAGATAAGTTTAACCTCAAAATTTATAATGGAAGAACCCAGTTAATCCCTTGAACCAAACAATCCCTTAACAAATTTCTTATTATATCTTACTCTAATGAATTGCCACCATCTTTATGAATTTTGGTTAATCCACCATATATTATATTTCAATAGCAGTGTTCAAGTAATTAATGTGTGGTTGGCTTTTTCACCTCCTGTACCACCAGCATGCTTGGTCCCGTTAGAAAGATTGGAATATCAATCTCATGTAGATAAACTACAAAAAACTCATGCTACAGGAGCAAAATCTTTCTCAAATTCTAGTGTTTCCACGACAACTAATCAATTTTGTTCTACCTAATTCCTCTTTCATGACTACGTATTTTTCCAGCTTAGGATGTCGGTAATCTTGTTGAATGCAAATAATTTGGTGATTGATAGGAGTATTATTTTGTTACAGGCAAAACAATCAAGCAAGAAGAGCACTGAGGCGG</genome_strand>
        <mrna_strand>TGCTTTGGCAAGA-CTACAAAG...........................................................................................................................GTGTATAAAGAAGACAACCCATTTGCCCAAAAGGAAAACAAATTAGCATGTGAGCTGAAGTTTCTGAAGAAATTGGCTTCGCTTGCCTTTATAGCCCTCTTTCCCATTGTCAATTTCCAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTTACTACAGTTGTCTTCTTCTCTTCATTTAATGAGATATCAGTGATGCCTCATCAGAATCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGACAAAATGGGCAGCAGGGTGTGTGGATGTACCAATGCATCCATTGTAAAAAAAACTTCCCTTCAAGCCAGGCCATAGCAGGCCATACAAAGGGTCATTTCAGAGATGGCTGGGTTAAAGGAACCCCCCAGAGCAAAGTATTTGTACTATTTTCTGAGTATCAGCAGCAGCAGGGTTCTATTACTGACTCTTCAATTCCCGAGAAACATGTTTTTTCTGCAGCAACATCTGACACTGACTTAACAGATGCTCATCGATTGCCAATAGGTGATGTGCAGAATTCCAGAAGCCTGGTCGTACGGCCTCCATCTCCAGCTTCGTCTAGCAGACAACCACGAATCCCTAGGCATCATTTGAGGCTTCGTGATCTGAAGATACTAGCTAGGCTAAGGGCTCGTCTTACCAGAGAGGAGCAAGAAGTCATTTTGCGTCTTCTTGATAGTGCTATGGAACAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAAACAATCAAGCAAGAAGAGCACTGAGGCGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0002K14-GUpky/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E554775" ref_strand="+" ref_description="SGN-E554775 [cTSC-5-G11]">
      <seq>ctttgattgtttaggtgtgtaaagaagacaacccatttgcccaaaaggagaataaattagcatgtgagctgaagtttctgaagaaattggcttcgcttgcctttataaccctctttcccattgtcaatttcaagatatttactacagttgtcttcttctcttcatttaatgagatatcagtgatgcctcatcagaaccagggacaaaatgggcagcagggtatgtggatgtaccaatgcatccattgtaaaaaaaacttcccttcaagccaggccatagcaggccatacaaagggtcatttcagagatggctgggttaaaggaaccccccagagcaaagtatttgtactattttctgagtatcagcaacagcagggttctatcactgactcttcaattcccgagaaacagattttttctgcagcaacttctgacactgacttagcagatgctcatcaattgcaaataggtgatgtgcagaattccagaagcctggtcgtgcggcctccatctccagcttcgtctagcagagaaccacgaatccctaggcatcatttgaggcttcgagatctgaagatactagctaggctaagggctcgtcttaccagagaggagcaagaagtcattttgcggcttcttgatagtgctatggaacaggcaaaacaatcaagcaagaagagcactgaggcggaggtgatccctaatagaaactcggaagcagcagccgtgattggaacta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0002K14-GUpky/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0002K14.1" temp_strand="+" temp_description="C02SLe0002K14.1  AC215442.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0002K14 sequenced_by:kribb upload_account_name:korea">
        <position start="8767" stop="18836"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="9067" g_stop="9200" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="134" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="9201" i_stop="16620" i_length="7420">
            <donor d_prob="0.965" d_score="1.00"/>
            <acceptor a_prob="0.532" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16621" g_stop="16686" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="135" r_stop="200" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="16687" i_stop="17368" i_length="682">
            <donor d_prob="0.856" d_score="1.00"/>
            <acceptor a_prob="0.936" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="17369" g_stop="17824" g_length="456"/>
          <reference_exon_boundary r_type="cDNA" r_start="201" r_stop="656" r_length="456" r_score="0.996"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="17825" i_stop="18454" i_length="630">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="18455" g_stop="18536" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="657" r_stop="738" r_length="82" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0002K14.1" gen_strand="+" ref_id="SGN-E554775" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>738</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0002K14.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E554775" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="9067" e_stop="9200"/>
          <exon e_start="16621" e_stop="16686"/>
          <exon e_start="17369" e_stop="17824"/>
          <exon e_start="18455" e_stop="18536"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTGATTGTTTAGGTGTGTAAAGAAGACAACCCATTTGCCCAAAAGGAGAATAAATTAGCATGTGAGCTGAAGTTTCTGAAGAAATTGGCTTCGCTTGCCTTTATAACCCTCTTTCCCATTGTCAATTTCAAGGTAAAAGTACTGATAATTGGACTACTAATCTACATAATTGAAGAAAAAAAGGGGAAAAATGGTTCTTTTTTTTTTTTTTTGATTGCACTGAGATATACTGCTAAATCTTTATGTAATTGAGAATCTAGATTGTTGGGTATATAAGTATTGAATGCTAGCATGAAAATTCATGTTACTGTGATTCATTACTGGGTATCCATTTGGTTTGCTATATGTGGAGATTTTACTCTTCTTTTAGAATTATACATTATTTCAAGGATGTGAGGTTCTTACTTTAATTTTCCTCATGATTTATACCTGTATAAGTTAGAGGGAAGGAACTATGTATTATTTTATACAAGATTTTTTTAGAAAAAGATTTCATTTTTTGGAAAGACAGTGGTTGCAAGCAATCTATTAGGACCTTTGACCCTTTCTGGTAGATGATCAACATTGTGTACACCAGGATGGTCTTCCAAAGAAAAAGCTCACTTTGCTAGATTGTCTACGACCTAATTGGGTTCCTGATATCAATGAGTAAAGTTGCCTTTACGTGATCCACCAGGACAAAGATATCCTTAGTAATTGGATTGAGAGTGAGATTGCTAGTTTTCTTGCTCCTCAACGTATCTACCATAATCATAGAGTCAACATCAATAGTGTCCTGCCTCAAGCCATTGTCTTTCAAATTGCCCGGCATATTTGGCTGCTATGGCTTCGGCCGCATGATGATTGTTGCACTGTATTGGGAATTCCATCTTGCAGTTAGGAAAAGTTTTATCCACTAGATACTTTGAGGTACCACATAATATGCTGCTCCGTTCTCCGTGTAGAATCTGTTCTGGTTGCAGATCTACCAGCACATCTGCTTCTTCAATAGTTGCATTTTGGGCTCCCATATATAAGCTTGAAAATGAACATCTCCAATTTTCTCTCTAGACCATTGAGATAATCTCTGTCCCAGTTCTTTGAGCTTCTGTTGTAATCTCCACGTAGGATTACCCTCAATTTCTTGATCATTCAATACTCACTATCTCTTGGAAATCAGGTTGTGTTATCTAGAAATCCAGGAATTTGAAATACTTCATTCCAGTAGTTTGCTCATTATCACATTTCAGCAGCATGGGCTTATGATCAGAGCCAGCCCTGGGCAAGTGCCTCACAGTCTTGAAGTGGTCATCAGTGTTATTAAAGCAAAAATCACAAAAATCTCAAAGGATGGTGGTGCTTCAAGTGCAAATAAAATATGGACTTAGTGAAAATAGGCGCAAAGGGAGAAAAAGATACAAGTATATCACATATATCTAGTTCAAAACTAACAATTATAAGCATGAATGACAAATATATGAGCAATGAGATTGGAAAAAATTATGATAAAGTGAAATATCAATTGTTTAGTGTCACCTCTGTAGAAGATGTGCATTGAAAAGGGTTTCAGACCAATCAGATCAATTTGAGGGGTGTACATGACCATTTCTAAGCTGATCACTGAAAGATTGAAAATGGTTATAGGGAAGCTGGTTGGGATCAAATGGCATTCTTGAAAGGAAGATGAATCATGAATGCTGCTCTTCTGGCTAATGAAATGGTCGACTCTAGGGTAAAACAGAAGAAACCATGCATCATATACTAGCTAGATATTCAATAGGCTTATGATCATGTTAATTGGAATTTCTTGCTAAAAATTTTGATAGACATGGGCTTTGGAGAGAAATGGAATTGCTGGATACAGTTTTGCATCTCGAATGTAAGGTTCTCACTCATTATAAATGGTAAACCGGTTGGATTTTTTCAATCCCATAGAGGTCTTAGACAAGGAGACCCTATGTCGCCTTTTTTGTTCCTACTTACTATGGAGGGTCTGCACCACATGTTCAAGGTAAATAGTTGGGTAAAAGGATTCAATGCTCATATAGGGAGAGGTGAAGATCTTGAAATCAAACATCTTTTTTATGCAGATGATGCTCGGGTTTTTGTGAAGCAAAAGTGGACCAATTAGACACTTAAGAGCAATCCTTACAATATTTGAGGGCATTTTCAGGACTTTATGTTAACTAGTCGAAAAGTTTTCTCTTCCCAATTTATCAGGTAGACAATTAACAAAGTCTAGCTGAGAATCTGGGATGTCAGATAGCCTCTCGGCTTACAAAGTACCTAGGATTGTCTCTGGGGGGCCATGAACAAGGAGTTGGAGGCATGGAATCGAGGTGATGGAGAGATGTGTGAAAAGGCTATCAAGATGAAATAGTCAATACTTCCACTACGGGGTAGGTTGACTGTCATCAAGTCAGTTTTAGATGGGCAACCTATCTACATAATGAGCCTATTTCCAATACCCAAGAACACTATGAAGAGAATCAACAAAATGAGAAGATCCTTCATTTGGCAAGGAACAAAGAATAGAGAGGCTACAACCTGGTGAAATGGGAGATACTCACTTTGAGCAGAAAACAATGTGGCCTTGGCATGAGAAATCTTTGCATCCAGAATAAATGCTTGCTGTAAAAATGGCTATGGAGATTTTGTACGGGAGATAGAGCCCTATGGAGAAAATTCGCAGCAGAAAAATATGGCTTGTTTAGCAAATGGACTACTGAGAAGGTGAAGGGGTCGTTTCAATGCTGTGGGTGGAAGTCCGTTAAGAAGGCTGTGGCCACAGTTTAATAACAATATCTATACTAATGTGGGAAATGGTCTGAAAACATATTTCTGAAATGAAATCTGGAAAGGGTATGATAGCCCAATGAACTTATTCCCAAACCTCTACACCCTGAGCTTACAAAGATTTGCTACTGTTGCTCAAGTATGGAGCCAACAAGAGTAGAACTTAGTGTTCAGGAGGGCTTCTGAATGGATGGGATGTGGGCGGGCTACTTGAGGTTCTTAACACCCCACCAGCCATGTCTCAAAGAAAGGATAAACGAATTTGGAAGCTACATAACATAGGAATGTCATAGTTAAATCTTGCTAAATCTTGCTACTGGTAATGAATGTTAATCAGTCGATACTAACAAGTGGCCTTGGAAGCTAGTGTGGAAGACGAGAAACCCATTAAAAGTAGCATGTTTTGCGTGGTTGGTCATAAGAAAAGTTTGCCTTACCCATGAGGCATTACAAAAAAGGGGATGCAGTTTTTTTTTTTGAAACTGAAAAGGGGGGGGGGGGATGCAGTTTTGCTCAAGATGCTTATGTGTGAGTAGAAAGCTGAAGTAAATAATCATTTGTTCATTCATGGTATAGCAGCTTCAAAATTGTGGAATATGTGGAGAGAGGTGATTAGGGCAAAATTTGAAATGGAGAAAAGGTGGATGACAAAGATGGTAACTACACCATATGAATATGGTATCTGGAGATCAGTAAGAAATCTTTGGGCTCGTTTCGTTCTAGAATCAGATTCCAGTTGGGTAATGGAATGAAGGTGTCATTTTGGGAGGACAAATGGATAGCCCAAAGAATCCTGAAACTATTATTCCCGGACTTATGTACACTGAGCTTGCAACAAATGCAACTCTGGCTGAAATGTGGACAGGACAGGGGTGGAACTTACATCTTAGGAAGAATTTAAATGATTGGGAGATGGGGAACATTGTGACCTTCCATGATACAATGGCACAATTTAGTACTCTGAGTAGGGAAGAAGACAAGGTTGTGTGGAAATCGACAGCAAAGGGGTCTTCAGTGTCAAGTCAGCTTACAAAGATCTCCATCATTCAAATTCAAATGACAGGATGGAGCTCTGGCCATGGCAGATGATAAAATCCCATACAAGGTAAACTGCTTCACATGGTTACTAGCAAAGGAAGCAGTGCTGTCACAAGAAAATATAAAGAAGAGGAAGTTCCAACTATGTTCAAGATTCTATTGTGTGAGGAACAGGCAGAGATAGTTGACCATCTCTTTCTGCATTGCAAATGGACAAATCAATTATGGAGAATATTCAGCAGCCTTAGGAAGATCACTTGGGTGAAACCAAGAAAAATAGCACAACTCCTAAATTGTTGGATCAATATAGGCAACACTACAATTAAGGAGGAGAGATGGAGGATTGTCCCAGCTTGTATATGGTGGACAGTGTGGAAAGAAAGGAATCAAAGAAGTTTTGAGGGCAAGAAGAACAATTTGCAGAATTTTAAGATGAATTGTATAGCTCTTTATTGTTTTTGGTGTAAACAGAAAGTTTTAGTACAGTCAGAAGAACTTTTTGATGTTATAGATTATTTGTGACAAAAAGAACAGATGGAGTCAGTCTAGTTTGTAATACTTTTGGAGGGGGGCTACTTTGATGTAGTATACCTGTGGATAAATAGGAAAAAAAGGTTATCATTCTCAAAAAAAAGTATACTAGGGGTTAGCTGGGTGATGCCAAGGACAACCATTGAGCTCTTTAATAGCCGGACAAGAATTGGCAGCAGAGGGAAAAGTGAAGACTGGTGGACGACTATCCCCCTGAATATTGGGGACCCTATGGTAAAAGAAAGGAATGCTAGGTGTTTTAAAGGACAAAATGATAGTTTTGATTTCTCTGAATATATGGACTCTTGTGGCGTGGTTGATATTGGGTAAACAGGTCCTAAATACAGAAGGTGCAACAACTGGACATCTAGCAAAAGGATATGGAAAAGGCTGAACAGAGTATTCATTAATAGCTTATGGGCTCAGAATTCAATCAGCGTCATCGAAGGTGCGCTAAGCACGCTTAGGCCCTGAAGCCGTCTTTGTTGGAACCATCCGTCCGTAGCTGATCATTTTTATCCGCACATTTGTTGTCATCAGCCATCCTTTTTTCCTTAGTACAATTTATCTAAGCTTGATCAGCAACTATAGCATTCTTTCCAGTAGGAACCCTCTTCTCTGCCCTCTTCTGTTCTAATTCTCTACGTTGAGTTATTGAGTGCCCCAAGATTTTGCAATTTCTACAAAATTTAGTTACTATAGGAGAGTCCTCATTGGTACTGCAATTTATTTTACGCAATTCCATCCGTGACAGTGGAATGGAGTTCCAGCAAAAGCACCCAGATAGGGACTACAGGAGATTCCTCATCTGATCTGAATGGTGGAGTGCATTTCTCTAGCCACATCACTTGACCGTCTATTTGAATAGATCGGTTATACCAAACATTTTTTAAATCTTCCTCATTGGAAAAATCTATAAACATAACGCAAAAATCGTAAACTCAAATCTTAACTTCACCTCTGATAAATTTGTGGCCTAGTCATGAATTTACCCACCAGAGTTAGTTTCACTCTTCAGCAGTAATTCCATAGTAATCGCTTGATTTGAAAATGATTGTCGGCATGCAATTGTTAGTATCATAACCAGCTTTCACTTGTGGATTCCCAAGTCGCTGGTTTCTAGGCTTGGGATAGCACTTAACGGTCGATTGAATTGCTTCAGAATGTTAGATTTCTGTGGAATTTCCTCCACAGCTAAGGTCACCATAGTAGTATCAATGTTTTTATCTACCAGTGGCGCCGTGCCAGGTCTACTGGTGTCCCATTGGACGGAGTGTGAGGCTCAATCACGAGAGAAAACAACCGTTGAGAAATAATACTCATGTATTGTATGGAAAACTTTTTCTGTTTACTTATTTTTATACGGCATAGAATGTGAAATAAGAACAAGGGTAAGTCATACATGGATAAATAAACTAAAGGTGAAGTGACCCTTATGATAGTAAAGAAACTTTTATTTTGGTTAACAAGTAACATATATTTCTCTCTCTGTCGAATACTCAGTTGACTCATACTAGTCTCATACAATAATGTTAAGTAAAGTGTTTTTTATTGATACTTCTTCAGAGCAAAAAGAAAGTTGTCTCTGTCATGAGCAGATATGGGTAAATTCATGTGGAAACAAGTTTTCATCTGTCTGGCTTGGAAAATGATAAACATTTCAGGATCTCATCTTTTCCACGATCTTGGCCAGAGGACTTGGAATTAAATTATTCTGAAGAAGCCACATAAATGATACAATTGAACCTACTTTGTCTACTTCATGATTAGACACTATCTGAACTTTTTGTGCTACAACTAGAAGAGCTAATGGAGATTCTACATAGAAACTCAGTAAAAAACAAATTTTTGGCTGAGTTGTACATTTTACAAGGCATTAGTCTTTTTTTTCTAAAAAAGTTGTTATTTTCAGTTCTCCTGAAAAATATTTTCAATCAAACACCACTAGAAAGGAGTGTTTCACTTTACTCCTCTCTAATTGTGTATGGCTCGGGTTTTTGACAAGTAATGTTGAATTTAATAATGGATTCTAACAAGGAATCAACATCATTTACATAGGGGCCAAGTGGCATCAATTAGCTAACAGAAAATACATCTAAGTTTGAGGCTATGTATATTTCTCCTTTTGCCAAACTTTTGTTCGAGTTTTTAGAAATACAAAATAAGGAAGTTCATGATTTTTTTAGCTGTTTCCAATCTGTTGATCTCAGTTTTATTTACGGAATTGGATTACCTTTCCTTCTTTGCAAAATTCACTTGTTGGATCAAAGAGAGGAAATGATCATTTAAATTTCTGTTACCGTTTACTTCTCATTGCCTTAAAAGGGAATCTGTTCTCTAATTGCCATGAGTTATACTGCTAAATCTTCTGAAAATAGAATCTACATTATTGGAAAGAAATATTAAACGCTGGCATGAAAGCTCATCTTAGTGTAATTAATCACTTGATATTATAAGTGATTAAGGATTTATGCTTAGCTTTCATCCTGGATCGACAGCTAGTATTTTATAGTTGTGCATTGTTTCACTTCTCCTTCTGTAGGATACTCAGTTGGCTCATACTTCTCATAAAATAGTGTTCAGAAGATTATTTTCAGTTGATACTTGTCTCTTCGTGACAAAAAGTATGTCACCTTTGTCATGAGTATCATGGACTCTTGTTTAAACAAGTATTTATTTGTCTGCCTTGAGAACCTAGTTCTGTCATTATTTTCCTATCCATCTTGGATGTTATTAATAATTTGAGACAATTAGTGATATAGCTGGAATATTTCTTGTAACTGTCTTATCATTTTACTAGCCATTCTTGAAGTAGGTTACCATTGGGGACCAAAGGCAACACATGTACGTGGAATATCATTTACTTCAAGGGATAATACCAAAATAAAGGAAAATAAATGGAACCTACAAAGTTTCTATTTGACTCAACCATGATTTAATACATTTTCTCCTCTTTCATGCATAATTCTGGAAGTAATCTTTGAACGTTGTCTCTTTAACTAGCAGAGTAGTTTCACCACAGTTCTTTTCCTCTCTTTTTGTTATTTTGGTCCTTCTGTTTTGTCCTCATCATTTATGTTTGATGATTCTGTTAACTGAAGCCATGTAGTATTTGATCTAAATAGATTGAAATAATTCTACCATTGCTTTAAAAATTGCAAATAAACATTTCTCTTATCCTTCACTAACCCTTGTCTGTAATCTGCAGATATTTACTACAGTTGTCTTCTTCTCTTCATTTAATGAGATATCAGTGATGCCTCATCAGAACCAGGTATGATTGTCATCAGGGAATAGAGTGAATTGTGAAACAAATAGGAAATAATGCAATACTTGGGTAGAGTTTCAGTGAATATAATATCCCTTCTCTTATAAGGTAATTAGGGAATGAAAATCCTACATATGACAAGTAAGAAGAATCATTGGAAGGAATGAACAATATATGTCACATCCTAATTCTATTCTGTGATAAGGTTCCCTGGTTCATAAACTCTAAGCTGACTGGTCATATCTCTCTACCAAGAGAAAATAGGGAAAATACCATACTCTTAAGATTCTATAAACCCTTGATTGGTACATATACTTTTTAAGTTTGTAACTCTACCTGCTTTCTTAACCTAGTGATGGAGTTACCTAATGTGTTGAACCCCTGAAGGATCAAGGACCATAAATAGTTGGAACAAGTCATCATTGCCTTTTAAAAGCAAATATTTCAACTATTTATTTATTAGGACAAAATCAATTGAAAAAAAGAAACTTAAGAGTTCCATTATTTATGGTCAAATAGAAAAAGATAAAACCAAAATAACGGAGTTGCAATTGTGTACTCCTTGTTGTTATATCTTTAAGATGCAATGACTTTTTTTATGCCAACTCTGTTTTTAAAAATTACTTGGTTAGAGCTCCTTTATATGTATTCCTCTTCTTCGATTAACATGGAAGTAACAACAATACAGGGACAAAATGGGCAGCAGGGTATGTGGATGTACCAATGCATCCATTGTAAAAAAAACTTCCCTTCAAGCCAGGCCATAGCAGGCCATACAAAGGGTCATTTCAGAGATGGCTGGGTTAAAGGAACCCCCCAGAGCAAAGTATTTGTACTATTTTCTGAGTATCAGCAACAGCAGGGTTCTATCACTGACTCTTCAATTCCCGAGAAACAGATTTTTTCTGCAGCAACTTCTGACACTGACTTAGCAGATGCTCATCAATTGCAAATAGGTGATGTGCAGAATTCCAGAAGCCTGGTCGTGCGGCCTCCATCTCCAGCTTCGTCTAGCAGAGAACCACGAATCCCTAGGCATCATTTGAGGCTTCGTGATCTGAAGATACTAGCTAGGCTAAGGGCTCGTCTTACCAGAGAGGAGCAAGAAGTCATTTTGCGTCTTCTTGATAGTGCTATGGAACAGGTTCATTCATTAATTTAAATATGCACCTGCTCGATCTTTTTCCTTCCTTCATCACTCCTATAATTTTCTTAGGTGTCATTTGGTTCAAAACTAGGGATTATATCAATCCCACTTTTTTAGGAGACGAGTGATTCCAGGATTTTGGTATAGAAATAACAGTGATCTTAGGTAATACTTCCGGTCAAATACGAGATAAGTTTAACCTCAAAATTTATAATGGAAGAACCCAGTTAATCCCTTGAACCAAACAATCCCTTAACAAATTTCTTATTATATCTTACTCTAATGAATTGCCACCATCTTTATGAATTTTGGTTAATCCACCATATATTATATTTCAATAGCAGTGTTCAAGTAATTAATGTGTGGTTGGCTTTTTCACCTCCTGTACCACCAGCATGCTTGGTCCCGTTAGAAAGATTGGAATATCAATCTCATGTAGATAAACTACAAAAAACTCATGCTACAGGAGCAAAATCTTTCTCAAATTCTAGTGTTTCCACGACAACTAATCAATTTTGTTCTACCTAATTCCTCTTTCATGACTACGTATTTTTCCAGCTTAGGATGTCGGTAATCTTGTTGAATGCAAATAATTTGGTGATTGATAGGAGTATTATTTTGTTACAGGCAAAACAATCAAGCAAGAAGAGCACTGAGGCGGAGGTGATCCCTAATAGAAACTCAGAAGCAGCAGCCGTGATTGGAACTA</genome_strand>
        <mrna_strand>CTTTGATTGTTTAGGTGTGTAAAGAAGACAACCCATTTGCCCAAAAGGAGAATAAATTAGCATGTGAGCTGAAGTTTCTGAAGAAATTGGCTTCGCTTGCCTTTATAACCCTCTTTCCCATTGTCAATTTCAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTTACTACAGTTGTCTTCTTCTCTTCATTTAATGAGATATCAGTGATGCCTCATCAGAACCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGACAAAATGGGCAGCAGGGTATGTGGATGTACCAATGCATCCATTGTAAAAAAAACTTCCCTTCAAGCCAGGCCATAGCAGGCCATACAAAGGGTCATTTCAGAGATGGCTGGGTTAAAGGAACCCCCCAGAGCAAAGTATTTGTACTATTTTCTGAGTATCAGCAACAGCAGGGTTCTATCACTGACTCTTCAATTCCCGAGAAACAGATTTTTTCTGCAGCAACTTCTGACACTGACTTAGCAGATGCTCATCAATTGCAAATAGGTGATGTGCAGAATTCCAGAAGCCTGGTCGTGCGGCCTCCATCTCCAGCTTCGTCTAGCAGAGAACCACGAATCCCTAGGCATCATTTGAGGCTTCGAGATCTGAAGATACTAGCTAGGCTAAGGGCTCGTCTTACCAGAGAGGAGCAAGAAGTCATTTTGCGGCTTCTTGATAGTGCTATGGAACAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAAACAATCAAGCAAGAAGAGCACTGAGGCGGAGGTGATCCCTAATAGAAACTCGGAAGCAGCAGCCGTGATTGGAACTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0002K14-GUpky/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E412861" ref_strand="+" ref_description="SGN-E412861 [STM-16-N20]">
      <seq>caaaactttttaatgatatattttttttttattatggtaactttttcttctatttatccacaggtatactacatcaaagtagcccctcttccaaaagtattacaaactagaccgactccatctgtgctttttgtcacaaatagtctaaaacatcaaaaagttcttctgcctgtactaagactttctgtttacaccaaaaataataaagagctatacaattcatcttgaaattctgcacattgttcttcttgccctcaaaacatctttgattcctttctttcacactgtccaccatatacaagctggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0002K14-GUpky/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0002K14.1" temp_strand="-" temp_description="C02SLe0002K14.1  AC215442.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0002K14 sequenced_by:kribb upload_account_name:korea">
        <position start="13820" stop="12929"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="13520" g_stop="13229" g_length="292"/>
          <reference_exon_boundary r_type="cDNA" r_start="17" r_stop="307" r_length="291" r_score="0.925"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0002K14.1" gen_strand="-" ref_id="SGN-E412861" ref_strand="+">
        <total_alignment_score>0.925</total_alignment_score>
        <cumulative_length_of_scored_exons>292</cumulative_length_of_scored_exons>
        <coverage percentage="0.951" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0002K14.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E412861" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="13520" e_stop="13229"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATACTTTTTTTTGAGAATGATAACCTTTTTTTCCTATTTATCCACAGGTATACTACATCAAAGTAGCCCC-CCTCCAAAAGTATTACAAACTAGACTGACTCCATCTGTTCTTTTTGTCACAAATAATCTATAACATCAAAAAGTTCTTCTGACTGTACTAAAACTTTCTGTTTACACCAAAAACAATAAAGAGCTATACAATTCATCTTAAAATTCTGCAAATTGTTCTTCTTGCCCTCAAAACTTCTTTGATTCCTTTCTTTCCACACTGTCCACCATATACAAGCTGGG</genome_strand>
        <mrna_strand>TATATTTTTTTTTTATTATGGTAACTTTTTCTTC-TATTTATCCACAGGTATACTACATCAAAGTAGCCCCTCTTCCAAAAGTATTACAAACTAGACCGACTCCATCTGTGCTTTTTGTCACAAATAGTCTAAAACATCAAAAAGTTCTTCTGCCTGTACTAAGACTTTCTGTTTACACCAAAAATAATAAAGAGCTATACAATTCATCTTGAAATTCTGCACATTGTTCTTCTTGCCCTCAAAACATCTTTGATTCCTTTCTTT-CACACTGTCCACCATATACAAGCTGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0002K14-GUpky/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E394326" ref_strand="+" ref_description="SGN-E394326 [TUS-14-C4]">
      <seq>gtaattagggaatgaaaatcctacatatgacaagtaagaagaatcattggaaggaatgaacaatatatgtcacatcctaattctattctgtgataaggttccctggttcataaactctaagctgactggtcatatctctctaccaagagaaaatagggaaaataccatactcttaagattctataaacccttgattggtacatatactttttaagtttgtaactctacctgctttcttaacctagtgatggagttacctaatgtgttgaacccctgaaggatcaaggaccataaatagttggaacaagtcatcattgccttttaaaagcaaatatttcaactatttatttattaggacaaaatcaattgaaaaaaagaaacttaagagttccattatttatggtcaaatagaaaaagataaaaccaaaataacggagttgcaattgtgtactccttgttgttatatctttaagatgcaatgactttttttatgccaactctgtttttaaaaattacttggttagagctcctttatatgtattcctcttcttcgattaacatggaagtaacaacaatacagggacaaaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0002K14-GUpky/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0002K14.1" temp_strand="+" temp_description="C02SLe0002K14.1  AC215442.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0002K14 sequenced_by:kribb upload_account_name:korea">
        <position start="16489" stop="17677"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16789" g_stop="17377" g_length="589"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="589" r_length="589" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0002K14.1" gen_strand="+" ref_id="SGN-E394326" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>589</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0002K14.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E394326" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16789" e_stop="17377"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTAATTAGGGAATGAAAATCCTACATATGACAAGTAAGAAGAATCATTGGAAGGAATGAACAATATATGTCACATCCTAATTCTATTCTGTGATAAGGTTCCCTGGTTCATAAACTCTAAGCTGACTGGTCATATCTCTCTACCAAGAGAAAATAGGGAAAATACCATACTCTTAAGATTCTATAAACCCTTGATTGGTACATATACTTTTTAAGTTTGTAACTCTACCTGCTTTCTTAACCTAGTGATGGAGTTACCTAATGTGTTGAACCCCTGAAGGATCAAGGACCATAAATAGTTGGAACAAGTCATCATTGCCTTTTAAAAGCAAATATTTCAACTATTTATTTATTAGGACAAAATCAATTGAAAAAAAGAAACTTAAGAGTTCCATTATTTATGGTCAAATAGAAAAAGATAAAACCAAAATAACGGAGTTGCAATTGTGTACTCCTTGTTGTTATATCTTTAAGATGCAATGACTTTTTTTATGCCAACTCTGTTTTTAAAAATTACTTGGTTAGAGCTCCTTTATATGTATTCCTCTTCTTCGATTAACATGGAAGTAACAACAATACAGGGACAAAAT</genome_strand>
        <mrna_strand>GTAATTAGGGAATGAAAATCCTACATATGACAAGTAAGAAGAATCATTGGAAGGAATGAACAATATATGTCACATCCTAATTCTATTCTGTGATAAGGTTCCCTGGTTCATAAACTCTAAGCTGACTGGTCATATCTCTCTACCAAGAGAAAATAGGGAAAATACCATACTCTTAAGATTCTATAAACCCTTGATTGGTACATATACTTTTTAAGTTTGTAACTCTACCTGCTTTCTTAACCTAGTGATGGAGTTACCTAATGTGTTGAACCCCTGAAGGATCAAGGACCATAAATAGTTGGAACAAGTCATCATTGCCTTTTAAAAGCAAATATTTCAACTATTTATTTATTAGGACAAAATCAATTGAAAAAAAGAAACTTAAGAGTTCCATTATTTATGGTCAAATAGAAAAAGATAAAACCAAAATAACGGAGTTGCAATTGTGTACTCCTTGTTGTTATATCTTTAAGATGCAATGACTTTTTTTATGCCAACTCTGTTTTTAAAAATTACTTGGTTAGAGCTCCTTTATATGTATTCCTCTTCTTCGATTAACATGGAAGTAACAACAATACAGGGACAAAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0002K14-GUpky/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E202415" ref_strand="+" ref_description="SGN-E202415 [cLEC-6-E11]">
      <seq>taattagggaatgaaaatcctacatatgacaagtaagaagaatcattggaaggaatgaacaatatatgtcacatcctaattctattctgtgataaggttccctggttcataaactctaagctgactggtcatatctctctaccaagagaaaatagggaaaataccatactcttaagattctataaacccttgattggtacatatactttttaagtttgtaactctacctgctttcttaacctagtgatggagttacctaatgtgttgaacccctgaaggatcaaggaccataaatagttggaacaagtcatcattgccttttaaaagcaaatatttcaactatttatttattaggacaaaatcaattgaaaaaaagaaacttaagagttccattatttatggtcaaatagaaaaagataaaaccaaaataacggagttgcaattgtgtactccttgttgttatatctttaagatgcaatgactttttttatgccaactctgtttttaaaaattacttggttagagctcctttatatgtattcctcttcttcgattaacatggaagtaacaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0002K14-GUpky/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0002K14.1" temp_strand="+" temp_description="C02SLe0002K14.1  AC215442.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0002K14 sequenced_by:kribb upload_account_name:korea">
        <position start="16490" stop="17660"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16790" g_stop="17360" g_length="571"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="571" r_length="571" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0002K14.1" gen_strand="+" ref_id="SGN-E202415" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>571</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0002K14.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E202415" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16790" e_stop="17360"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAATTAGGGAATGAAAATCCTACATATGACAAGTAAGAAGAATCATTGGAAGGAATGAACAATATATGTCACATCCTAATTCTATTCTGTGATAAGGTTCCCTGGTTCATAAACTCTAAGCTGACTGGTCATATCTCTCTACCAAGAGAAAATAGGGAAAATACCATACTCTTAAGATTCTATAAACCCTTGATTGGTACATATACTTTTTAAGTTTGTAACTCTACCTGCTTTCTTAACCTAGTGATGGAGTTACCTAATGTGTTGAACCCCTGAAGGATCAAGGACCATAAATAGTTGGAACAAGTCATCATTGCCTTTTAAAAGCAAATATTTCAACTATTTATTTATTAGGACAAAATCAATTGAAAAAAAGAAACTTAAGAGTTCCATTATTTATGGTCAAATAGAAAAAGATAAAACCAAAATAACGGAGTTGCAATTGTGTACTCCTTGTTGTTATATCTTTAAGATGCAATGACTTTTTTTATGCCAACTCTGTTTTTAAAAATTACTTGGTTAGAGCTCCTTTATATGTATTCCTCTTCTTCGATTAACATGGAAGTAACAA</genome_strand>
        <mrna_strand>TAATTAGGGAATGAAAATCCTACATATGACAAGTAAGAAGAATCATTGGAAGGAATGAACAATATATGTCACATCCTAATTCTATTCTGTGATAAGGTTCCCTGGTTCATAAACTCTAAGCTGACTGGTCATATCTCTCTACCAAGAGAAAATAGGGAAAATACCATACTCTTAAGATTCTATAAACCCTTGATTGGTACATATACTTTTTAAGTTTGTAACTCTACCTGCTTTCTTAACCTAGTGATGGAGTTACCTAATGTGTTGAACCCCTGAAGGATCAAGGACCATAAATAGTTGGAACAAGTCATCATTGCCTTTTAAAAGCAAATATTTCAACTATTTATTTATTAGGACAAAATCAATTGAAAAAAAGAAACTTAAGAGTTCCATTATTTATGGTCAAATAGAAAAAGATAAAACCAAAATAACGGAGTTGCAATTGTGTACTCCTTGTTGTTATATCTTTAAGATGCAATGACTTTTTTTATGCCAACTCTGTTTTTAAAAATTACTTGGTTAGAGCTCCTTTATATGTATTCCTCTTCTTCGATTAACATGGAAGTAACAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0002K14-GUpky/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E207100" ref_strand="+" ref_description="SGN-E207100 [cLEC-30-L18]">
      <seq>taattagggaatgaaaatcctacatatgacaagtaagaagaatcattggaaggaatgaacaatatatgtcacatcctaattctattctgtgataaggttccctggttcataaactctaagctgactggtcatatctctctaccaagagaaaatagggaaaataccatactcttaagattctataaacccttgattggtacatatactttttaagtttgtaactctacctgctttcttaacctagtgatggagttacctaatgtgttgaacccctgaaggatcaaggaccataaatagttggaacaagtcatcattgccttttaaaagcaaatatttcaactatttatttattaagacaaaatcaattgaaaaaaagaaacttaagagttccattatttatggtcaaatagaaaaaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0002K14-GUpky/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0002K14.1" temp_strand="+" temp_description="C02SLe0002K14.1  AC215442.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0002K14 sequenced_by:kribb upload_account_name:korea">
        <position start="16490" stop="17506"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16790" g_stop="17206" g_length="417"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="417" r_length="417" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0002K14.1" gen_strand="+" ref_id="SGN-E207100" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>417</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0002K14.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E207100" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16790" e_stop="17206"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAATTAGGGAATGAAAATCCTACATATGACAAGTAAGAAGAATCATTGGAAGGAATGAACAATATATGTCACATCCTAATTCTATTCTGTGATAAGGTTCCCTGGTTCATAAACTCTAAGCTGACTGGTCATATCTCTCTACCAAGAGAAAATAGGGAAAATACCATACTCTTAAGATTCTATAAACCCTTGATTGGTACATATACTTTTTAAGTTTGTAACTCTACCTGCTTTCTTAACCTAGTGATGGAGTTACCTAATGTGTTGAACCCCTGAAGGATCAAGGACCATAAATAGTTGGAACAAGTCATCATTGCCTTTTAAAAGCAAATATTTCAACTATTTATTTATTAGGACAAAATCAATTGAAAAAAAGAAACTTAAGAGTTCCATTATTTATGGTCAAATAGAAAAAGA</genome_strand>
        <mrna_strand>TAATTAGGGAATGAAAATCCTACATATGACAAGTAAGAAGAATCATTGGAAGGAATGAACAATATATGTCACATCCTAATTCTATTCTGTGATAAGGTTCCCTGGTTCATAAACTCTAAGCTGACTGGTCATATCTCTCTACCAAGAGAAAATAGGGAAAATACCATACTCTTAAGATTCTATAAACCCTTGATTGGTACATATACTTTTTAAGTTTGTAACTCTACCTGCTTTCTTAACCTAGTGATGGAGTTACCTAATGTGTTGAACCCCTGAAGGATCAAGGACCATAAATAGTTGGAACAAGTCATCATTGCCTTTTAAAAGCAAATATTTCAACTATTTATTTATTAAGACAAAATCAATTGAAAAAAAGAAACTTAAGAGTTCCATTATTTATGGTCAAATAGAAAAAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0002K14-GUpky/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E393883" ref_strand="+" ref_description="SGN-E393883 [TUS-14-C4](-)">
      <seq>ccagaggtggagcaagaactcaccccccccccctcccgatagtgctatggaacaggcaaaacaatcaagcaagaagagcactgaggcggaggtgatccctaatagaaactcagaagcagcagccgtgattggaactactgacacagataccgatgtgtcctctgaggaatcagatgatgagtccaaaaatatgtgatcctatggttgaagcatatatgcaatagtttctgggctatttcttattagttatggttccgaagattgttcaaattattagtgaagtgttttattagatatatgaacagtataatgttgttgcttttttagatcatctaagagtagtgttgaacaaggttcttccctttatcccctctgttgaatttatgtatatgtgactgttactgaggctttgtctgtgaggccttggttgctttattaattgaagatattatgtatgttttgctattatgaaggaagccaactgttacacttaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0002K14-GUpky/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0002K14.1" temp_strand="+" temp_description="C02SLe0002K14.1  AC215442.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0002K14 sequenced_by:kribb upload_account_name:korea">
        <position start="17501" stop="19199"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17807" g_stop="17824" g_length="18"/>
          <reference_exon_boundary r_type="cDNA" r_start="38" r_stop="55" r_length="18" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="17825" i_stop="18454" i_length="630">
            <donor d_prob="0.998" d_score="0.00"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18455" g_stop="18901" g_length="447"/>
          <reference_exon_boundary r_type="cDNA" r_start="56" r_stop="502" r_length="447" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0002K14.1" gen_strand="+" ref_id="SGN-E393883" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>465</cumulative_length_of_scored_exons>
        <coverage percentage="0.926" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0002K14.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E393883" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17807" e_stop="17824"/>
          <exon e_start="18455" e_stop="18901"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATAGTGCTATGGAACAGGTTCATTCATTAATTTAAATATGCACCTGCTCGATCTTTTTCCTTCCTTCATCACTCCTATAATTTTCTTAGGTGTCATTTGGTTCAAAACTAGGGATTATATCAATCCCACTTTTTTAGGAGACGAGTGATTCCAGGATTTTGGTATAGAAATAACAGTGATCTTAGGTAATACTTCCGGTCAAATACGAGATAAGTTTAACCTCAAAATTTATAATGGAAGAACCCAGTTAATCCCTTGAACCAAACAATCCCTTAACAAATTTCTTATTATATCTTACTCTAATGAATTGCCACCATCTTTATGAATTTTGGTTAATCCACCATATATTATATTTCAATAGCAGTGTTCAAGTAATTAATGTGTGGTTGGCTTTTTCACCTCCTGTACCACCAGCATGCTTGGTCCCGTTAGAAAGATTGGAATATCAATCTCATGTAGATAAACTACAAAAAACTCATGCTACAGGAGCAAAATCTTTCTCAAATTCTAGTGTTTCCACGACAACTAATCAATTTTGTTCTACCTAATTCCTCTTTCATGACTACGTATTTTTCCAGCTTAGGATGTCGGTAATCTTGTTGAATGCAAATAATTTGGTGATTGATAGGAGTATTATTTTGTTACAGGCAAAACAATCAAGCAAGAAGAGCACTGAGGCGGAGGTGATCCCTAATAGAAACTCAGAAGCAGCAGCCGTGATTGGAACTACTGACACAGATACCGATGTGTCCTCTGAGGAATCAGATGATGAGTCCAAAAATATGTGATCCTATGGTTGAAGCATATATGCAATAGTTTCTGGGCTATTTCTTATTAGTTATGGTTCCGAAGATTGTTCAAATTATTAGTGAAGTGTTTTATTAGATATATGAACAGTATAATGTTGTTGCTTTTTTAGATCATCTAAGAGTAGTGTTGAACAAGGTTCTTCCCTTTATCCCCTCTGTTGAATTTATGTATATGTGACTGTTACTGAGGCTTTGTCTGTGAGGCCTTGGTTGCTTTATTAATTGAAGATATTATGTATGTTTTGCTATTATGAAGGAAGCCAACTGTTACACTTATAGCATAGG</genome_strand>
        <mrna_strand>GATAGTGCTATGGAACAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAAACAATCAAGCAAGAAGAGCACTGAGGCGGAGGTGATCCCTAATAGAAACTCAGAAGCAGCAGCCGTGATTGGAACTACTGACACAGATACCGATGTGTCCTCTGAGGAATCAGATGATGAGTCCAAAAATATGTGATCCTATGGTTGAAGCATATATGCAATAGTTTCTGGGCTATTTCTTATTAGTTATGGTTCCGAAGATTGTTCAAATTATTAGTGAAGTGTTTTATTAGATATATGAACAGTATAATGTTGTTGCTTTTTTAGATCATCTAAGAGTAGTGTTGAACAAGGTTCTTCCCTTTATCCCCTCTGTTGAATTTATGTATATGTGACTGTTACTGAGGCTTTGTCTGTGAGGCCTTGGTTGCTTTATTAATTGAAGATATTATGTATGTTTTGCTATTATGAAGGAAGCCAACTGTTACACTTAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0002K14-GUpky/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E246710" ref_strand="+" ref_description="SGN-E246710 [cLEF-45-O22]">
      <seq>cacaaaccgacatatagatttaggggatcggagtgtcacgtaccgacacaagaggattaatgaatattgagggagcggagtgtcacgtaccgacacaagagaaataaagataatgaatcttgaaagatgttaatatactcaatctaatgaacatgattcccaaatgagtatggtattgaggcttgagtcctcatgtgtgaacttgacggtaattgttaatgatatagtatttgttgttgctacatgttgagtatcatagttgattttatgatattacttggtatatatattgatttctattttgagttggccgatgatatctactcagtacccgtgttttgtactgacccctacttttatgttctcttcttgtttatttgtggagtgcagcaaacgtgccatcgtgttcaactcaacagtaattcaagccagtcttactacatcggaaattcagggtgagctaatgcttctagcttggact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0002K14-GUpky/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0002K14.1" temp_strand="-" temp_description="C02SLe0002K14.1  AC215442.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0002K14 sequenced_by:kribb upload_account_name:korea">
        <position start="56438" stop="55361"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="56138" g_stop="55661" g_length="478"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="481" r_length="481" r_score="0.937"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0002K14.1" gen_strand="-" ref_id="SGN-E246710" ref_strand="+">
        <total_alignment_score>0.937</total_alignment_score>
        <cumulative_length_of_scored_exons>478</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0002K14.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E246710" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="56138" e_stop="55661"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACGAACCGACACGTAGATTTAGGGGAGCGGAGTGTCACGTACCGACACAAGAGAATTAATGAATA-TGAGGGAGCGGAGTGTCACGTACCGACACAAGAGAAATAAAGATAATGAATCTTGAAAGATGGTAATATACTCAATCTAATTAACATAATTCCCAAATGAGTATGGTATTGAGGCTTGAGTCCTCATGTGTGAACTTGACGGTAATTGTTAATGATATAGTACTTGTTGTTGCTACATGTTGAGTATCATAGTTGATTTTATGAAATTACTTGG--TATATATTGATTTCTATTTTGAGTTGGCCGATGATATCTACTCAGTACCCGTGTTTTGTACTGACCCCTACTTTTATGTTTTCTTCTTGTTTATTTGTGGAGTGCAGCAAACGTGCCGTCATCTTCGACTCAACAGTAACTCTAGCCAGTCTTCATTACTCCGGATA-TCAGGGTGAGCTAATGCTTCTAGCTTGGACT</genome_strand>
        <mrna_strand>CACAAACCGACATATAGATTTAGGGGATCGGAGTGTCACGTACCGACACAAGAGGATTAATGAATATTGAGGGAGCGGAGTGTCACGTACCGACACAAGAGAAATAAAGATAATGAATCTTGAAAGATGTTAATATACTCAATCTAATGAACATGATTCCCAAATGAGTATGGTATTGAGGCTTGAGTCCTCATGTGTGAACTTGACGGTAATTGTTAATGATATAGTATTTGTTGTTGCTACATGTTGAGTATCATAGTTGATTTTATGATATTACTTGGTATATATATTGATTTCTATTTTGAGTTGGCCGATGATATCTACTCAGTACCCGTGTTTTGTACTGACCCCTACTTTTATGTTCTCTTCTTGTTTATTTGTGGAGTGCAGCAAACGTGCCATCGTGTTCAACTCAACAGTAATTCAAGCCAGTCTT-ACTACATCGGAAATTCAGGGTGAGCTAATGCTTCTAGCTTGGACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0002K14-GUpky/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E357033" ref_strand="+" ref_description="SGN-E357033 [cTOS-22-C24]">
      <seq>actgaatagatatcatcgcccaactcaaaatagaaatcaatatatatcaagnattatcataaaatcaactatgatactcaacatgtagcaacaacaagcactatatcattaacaattaccgtcacgttcacacatgaggactcaagcctcaataccatactcatttgggaatcatgttcattagatttagtatattaacatctttcaagattcattatctttatttctcttgtgacggaacatgacattccgctccctcatattcattaatcctcttgtgtgaacacatgacactccgatcccctaaatctacatgacagtttcatgaacgctatcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0002K14-GUpky/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0002K14.1" temp_strand="+" temp_description="C02SLe0002K14.1  AC215442.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0002K14 sequenced_by:kribb upload_account_name:korea">
        <position start="55513" stop="56589"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="55813" g_stop="56149" g_length="337"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="337" r_length="337" r_score="0.905"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0002K14.1" gen_strand="+" ref_id="SGN-E357033" ref_strand="+">
        <total_alignment_score>0.905</total_alignment_score>
        <cumulative_length_of_scored_exons>337</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0002K14.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E357033" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="55813" e_stop="56149"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACTGAGTAGATATCATCGGCCAACTCAAAATAGAAATCAATATATACCAAGTAATTTCATAAAATCAACTATGATACTCAACATGTAGCAACAACAAGTACTATATCATTAACAATTACCGTCAAGTTCACACATGAGGACTCAAGCCTCAATACCATACTCATTTGGGAATTATGTTAATTAGATTGAGTATATTACCATCTTTCAAGATTCATTATCTTTATTTCTCTTGTGTCGGTACGTGACACTCCGCTCCCTCATATTCATTAATTCTCTTGTGTCGGTACGTGACACTCCGCTCCCCTAAATCTACGTGTC-GGTTCGTGACACCCGATCC</genome_strand>
        <mrna_strand>ACTGAATAGATATCATCGCCCAACTCAAAATAGAAATCAATATATATCAAGNATTATCATAAAATCAACTATGATACTCAACATGTAGCAACAACAAGCACTATATCATTAACAATTACCGTCACGTTCACACATGAGGACTCAAGCCTCAATACCATACTCATTTGGGAATCATGTTCATTAGATTTAGTATATTAACATCTTTCAAGATTCATTATCTTTATTTCTCTTGTGACGGAACATGACATTCCGCTCCCTCATATTCATTAATCCTCTTGTGTGAACACATGACACTCCGATCCCCTAAATCTACATGACAGTTTCATGA-ACGCTATCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0002K14-GUpky/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E391780" ref_strand="+" ref_description="SGN-E391780 [TUS-24-O2]">
      <seq>tcacaaaccgacatatagatttaggggatcggagtgtcacgtaccgacacaagaggattaatgaatattgagggagcggagtgtcacgtaccgacacaagagaaataaagataatgaatcttgaaagatgttaatatactcaatctaatgaacatgattcccaaatgagtatggtattgaggcttgagtcctcatgtgtgaacttgacggtaattgttaatgatatagtatttgttgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0002K14-GUpky/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0002K14.1" temp_strand="-" temp_description="C02SLe0002K14.1  AC215442.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0002K14 sequenced_by:kribb upload_account_name:korea">
        <position start="56439" stop="55604"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="56139" g_stop="55902" g_length="238"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="239" r_length="239" r_score="0.950"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0002K14.1" gen_strand="-" ref_id="SGN-E391780" ref_strand="+">
        <total_alignment_score>0.950</total_alignment_score>
        <cumulative_length_of_scored_exons>238</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0002K14.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E391780" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="56139" e_stop="55902"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCACGAACCGACACGTAGATTTAGGGGAGCGGAGTGTCACGTACCGACACAAGAGAATTAATGAATA-TGAGGGAGCGGAGTGTCACGTACCGACACAAGAGAAATAAAGATAATGAATCTTGAAAGATGGTAATATACTCAATCTAATTAACATAATTCCCAAATGAGTATGGTATTGAGGCTTGAGTCCTCATGTGTGAACTTGACGGTAATTGTTAATGATATAGTACTTGTTGTT</genome_strand>
        <mrna_strand>TCACAAACCGACATATAGATTTAGGGGATCGGAGTGTCACGTACCGACACAAGAGGATTAATGAATATTGAGGGAGCGGAGTGTCACGTACCGACACAAGAGAAATAAAGATAATGAATCTTGAAAGATGTTAATATACTCAATCTAATGAACATGATTCCCAAATGAGTATGGTATTGAGGCTTGAGTCCTCATGTGTGAACTTGACGGTAATTGTTAATGATATAGTATTTGTTGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0002K14-GUpky/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E349726" ref_strand="-" ref_description="SGN-E349726 [cTOS-3-C5]">
      <seq>ttatgttcattagattgagtatataacatctttcaagattcattgtctttatttctcttgtgtcggtacgtgacattccgctccntcatattcattaatcttcttgtgtcggtacgtgatactctgatcccctaaatctacgtgtcggaacgtgacactccgatcccctaaatctacgtgtcggttcgtgacacctgatcccctaaatctacgtgtcggttcgtgacacccgatcccctaaatctacgtgtcggttcgtgacacccgatcccctaaatctacgtgtcggttcgtgacacccgatcccctaatctatgtgttggttcgtgacacctgatcccttaatctacgtgtcggtttgtgacacccgatcccctaattctacgtgtcagttcgtgacacccgatcccctaatctcattctatcaattcatcaagccttctcccttaccaaggcatcatcaatctcattactttagttcatcaagccttctcccttaccaaggcatcatcattaaaaagagattaggtttttacaagatttgggattcaataacttcatcatgcttatataataacaattatatagttacattcatgcaagcatacaattaagcacatagcagggtttacaatattatcaatacatatcattctctattaagagtttactacgaatatcgtaagagaaacaataacctacctccaccgaagacta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0002K14-GUpky/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0002K14.1" temp_strand="+" temp_description="C02SLe0002K14.1  AC215442.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0002K14 sequenced_by:kribb upload_account_name:korea">
        <position start="55684" stop="63821"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="55984" g_stop="56328" g_length="345"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="344" r_length="344" r_score="0.925"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="56329" i_stop="63147" i_length="6819">
            <donor d_prob="0.900" d_score="0.86"/>
            <acceptor a_prob="0.000" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63148" g_stop="63521" g_length="374"/>
          <reference_exon_boundary r_type="cDNA" r_start="345" r_stop="717" r_length="373" r_score="0.930"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0002K14.1" gen_strand="+" ref_id="SGN-E349726" ref_strand="-">
        <total_alignment_score>0.928</total_alignment_score>
        <cumulative_length_of_scored_exons>719</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0002K14.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E349726" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="55984" e_stop="56328"/>
          <exon e_start="63148" e_stop="63521"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTATGTTAATTAGATTGAGTATATTACCATCTTTCAAGATTCATTATCTTTATTTCTCTTGTGTCGGTACGTGACACTCCGCTCCCTCATATTCATTAATTCTCTTGTGTCGGTACGTGACACTCCGCTCCCCTAAATCTACGTGTCGGTTCGTGACAC-CCGATCCCCTAAATCTACGTGTTGGTTCGTGACACCCGATCCCCTAAATCTACGTGTCGGTTTGTGACACCCGATCCCCTAAATCTACGTGTCGGTTTGTGACACCCGATCCCCTAAATCTACGTGTCGGTTCGTGACACCCGATCCTCTAAATCTACGTGTCGGTTCGGGACACCCGATCCCCTAATCTCCTTCTATCAATTCATCAAGCCTTCTTTCTTACCAAGGCATCATCAATCTCATTATTTTAGTTCATCACGACTTCTTTTATACCAAGGCCTCATTATTAACAAAGAGATTAGGGTTTTGCAAGATTTGGGATTCAATAACTTCATCATGCTTATATAATTACAATTATATAATTACATTCATGCAAGCATACAATTAAGAACATAGCAGGGTTTACAATATTATCAATACATATCATTCGCTATTAAGAGTTTACTACGAATATCGTAAGAGAAACCATAACCTACCTCCACCGAAGATTAGTGATCAAGCAAGCAATTTCCCAAGCTTTGTTTCTCTTCGTTTCTCGTTCGACTCTCTCTCTCTTTCTCTTGTTCTTTCTATTTTCTTTATTCAAAATCCTCTTTATTTTACCCTAATTAGCATATAATTAAGTATAAACGATGGCAATAATAACCCACTAATTAACTTAAGGTTACCTCTTTTAACCCCAAGTAATTAGACTTATTAACATTAACCCACTAACTATATAATTAAAGCAGGAATAGTCAAAAACGTCTCTTAAAACAATTAAGGAAATCCGACTCAGACTGGGATTACGCAACCTGCGACGGCCCGTCGTGCCTGCGACGGTCCGTCCTGCAGGCCGTCGCAAGATTCAGAGACTCAATTTCCACCAAAAAGTCTGTGACGGTCCGTCACACATATGACGGTCCGTCCTGCCATTTCGTTACGAAGTTCAGAGAGTCGATTTTCAGTATCCAATTTCAGATTTTCTAAGTGTTTTGTAACGAGACCCTGCGACGATCCGTCGTGCCTATGACGGTCCATCGTGGGGTCCGTTGCCTCAGCCTGTTTTTACAGAAATAAAATCTGCTGTTCAAAATGACTAAACAGGTTGTTACAATAGATACCAATTTACCCATCGTTCGTCCCCGAACGATCTCAAGAAGGAAAACAAGGGCGAAAAAGAGTACCTGAATCTGTAAACAGATGTGGGTATCTTTCTCGCATATCTGCCTCCTTCTCCCAAGTGGCTTCTTCAACGGGTCGATTCTTCCATTGAACTTTGATGGATGCAATCTCCCTTGATCTCAACTTGCGAATTTCTCTATCTAGAATGGCAACAGGTTCCTATTCATAAGACAAGTTCTCATCAAGCAAAACTGAATCCCAATGGATAATGTAGTTTCCATCCCCATGGTATCTTTTCAACATCGACACATGGAATACCGGATGCACTCCGGACAGCTCTGGAGGCAAGGCTAACTCATAAGCCACCTCCCCTACTCGCTTAAGTACTTCAAATGGACCAATATACCTTGAGCTAAGTTTACCTCGCTTACCAAACCGCATCACCCCTTTCATTGGCGAAACCTTCAATAAGACTTGTTCACCCTCCATAAACTCCAAGTCTCTAACCTTCTGATCTGCATACTCCTTTTGTCTACTTTGCGCCGCTAGAAGCTTTTCTTGAATAGATTTCACTTTATCTAACGATTCCCTCAGAAGGTCAGTACCCCAAGGTCTAACTTCAAATGCATCAAACCACCCAATGGGAGACCTACATTTTCTCCCATATAGTGCCTCAAATGGGGCCATATCAATGCTTGAGTGATAGCTATTGTTGTAGGAGAACTCTGCTAAGGGTAAGAAGCTATCCCACTGACCGCCAAATTCTATCACACATGCACGAAGCATATCCTCCAACACTTGAATCGTTCGCTCAGACTGACCATCGGTCTGAGGATGGAACGCAGTACTAAGGTCCAACCTAGTACCCAATTCCGCATGCAATGTTTTCCAAATCTTAGAAGTAAACTGCGTACCTCTATCTGATATAATGGAGAGTGGAACCCCATACAATCGCACCACTTCCGAGATGTAAAGTTTGGCTAACTTTTCTACATTGTAAGTCACCTTGACCGGAATGAAGTGAGCAGACTTAGTTAACCTATCAACAATTACCCAAATAGAATCAAACTTTCCCAATGTCTTTGGAAGACCAACCACGAAATCCATTGCAATCCTTTCCCACTTCCATTCAGGAATGGGCATTCTCTGAAGTGTTCCTCCGTGCCTTTGGTGTTCATACTTTACCAGTTGACAGTTTGGACATTTGGCAATAAAATCCACAATATTATGCTTCATTCTACTCCACCAAAAGTGTTGCTTTAGGTCATGGTACATCTTGGTTGCACCCGGATGTATCGAATACCTTGAACTATGAGCCTCTGTCAGAATAGTGTTGATTAAATCATCGACGCGGGGTACACATACCCTTCCCTTAATCCTCAAAACACCTTTCTCATCGATTGTCGCTTCTTTAGCCTCTCCTTGCAACAATTTATCTCGGATACTGATCAATTTTTCATCATTAAACTGCTTTCCCTTAATCTTGTCAAGGAATGAAGATCTTGCCTCCACACAAGCTAAAAATCCTCCCTTCTCATTTACTTCTAATCTCATAAGGTCGTTAGCCAGAATCTGAACTTCTCTAGCCAATGGGCGTCTAGAAGCTTGCAAGTGAGCTAGACTTCCCATGCTTCCCGCCTTTCTACTTAAAGCATCCGCTACAACATTCGCCTTCCCCAGATGATACAAAATAGTGATGTCGTAGTCCTTCAGTAGTTCCATCCATCTCCTCTGTCTCAAGTTCAAATCTTTCTGAGTAAAGACATACTGTAGGCTATCATGATCCGTATAGACCTCACACTTAACCCCATATAAATAGTGTCTCCATTGCTTTAATGCAAACACTACCGCGGCCAATTCCAAATCATGAGTTGGATAGTTACGTTCATGCACTTTTAATTGTCTTGAAACATAAGCAATCACATTCTTCTCTTGCATTAGTACTGCACCCAAACCTAAATAGGATGCATCACAATAGACAATGAAATTCTTACCTTCCACTGGCAAGGTGAGAGTTGGTGCAGTAGTCAACAAAGTCTTGAGCTTCTGAAAGCTTTCCTCACACTCATCCGACCATACAAATGGAACATTTTGCTTAGTCAAGTTCGTCAGTTGGGAGGCAATAGAAGAGAATCCCTTGACAAATCGGCGGTAGTAGCTAGCTAACCCAACAAAGCTCCTTATTTCTGACACATTAGTAGGTCTTACCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCACGTGCCCCAAGAAGGACACTGCATCTAGCAAAAACTCACACTTAGAGAACTTGGTATAAAGCTTTTTCTCCCTCAACATTTCCAATACCATTCTCAAATGCTCCTTATGTTCCTCCTTACTTTTAGAGTATATCAGTATGTCATCAATAAATACGATCACAAAGAGATCCAAATATGGCTTAAAAATCCCGTTCATCAAACTCATGAACGCAGCAGGGGCATTCGTAAGACCAAAAGACATCACTACAAATTCGTAATGCCCATACCTAGTTCTAAAAGCGGTCTTTGGCACATCCGTTGCCCGTATTTTCAATTGATGATAGCCGGATCTCAAGTCAATCTTAGAGAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATCAATGCAAGGAAGAGGATACTTGTTCTTTATGGTTACCTTGTTCAACTGCCGGTAGTCTATGCACATCCGAAAACTCCCATCCTTCTTCTTTACAAACAAAACCGGAGCACCCAAGGAGATGCACTTGGTCTAATGAAGCCTTTGCTCAACAACTCTTGAAGTTGTGCTTTTAACTCTCTTAACTCCGCGGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGAGTACCGGGTTCAAGATCAATATAGAAGTCAATATCCCTATCTGGTGGCATACCAGGAAGATCTGCAGGGAACACATCCAGAAACTCACGGACCACCGAAACCGACTCAATCGAAGGTACTTGGGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTAAACACCCTTTACTAACCATTTTCTTAGCACGAAGAAAGGAGATGATACACACCGGATTGGAAGTGTAGTCACCTTCCCACACTAACGGATCTGTCCCAGGCTTGGCTAACGTCACCGTTTTAGCATTACAATCCAAGATCGCAAATTGCGGAGAAAGCCAAGTCATACCCAGAATTACATCAAAATCATCCATTTCTAAGATAACCAAATCTACATAAGTGTTGCTCCCCACGAAGTTCACCAAACAAGACCTATATACCTTTTCAACTACCACAGACTCACCCACCGGTGTAGAAACACGAATAGGCATATCAAGTAATTCACAATGTAAATTTAGACCATTAGCAAATGAGGAAGATACATAAGAAAATGTGGATCCAGGATCAAACAATACATAAGCCATGCAATCACAAACCAGAAGATTACCTGTGATGACAGCATCAGATGCCTCCGCTTCAGACCGCCCAGGGAAAGCGTAACAATGGGCCCTATCGTTTGTCTGTCCATTGCCCCTACCATGTTGTGATGTAGTGGCTCTAGTTTGCCCACCACCTCGGCCATTTTGGTGACCACCATTACCTCGACCACCACGTCCTCCAGAATAACGGCCTCTACCATGACCACCTCTACCTCTAGCCATTGGGGATCTATAACTCTGTTTTGGACAATTCCTCCTAATATGTCCAGTCTCCCCACATCCATAACACTCTCTGGAGTCAAGCATAGGTCTCTCAGAGAAGTGTTGACCGGTCTGAGGTGGACCCCCAACTACAGTCTGTAGTGAAGATTGAATGGGTCGAACTGAGTAACCTCCGGAACCCTGTCCTCTAGAGTAAGAACCATTAAACTCACCTCCCTTTCGAAACCTCTTTGATGTCGATGCCATGGTGAATTCATCTGGCTTCACTCCTTCCACCTCTACCACGAAATCTACCACTTCTTGGAAGGATTTTGCCATAGCCGCTACCTGTAAGGCTGAAATCCACAACTCTGACCTCAACCCCTTCACAGAATGACGAATCCGCTCTTGTGGACTGAAACAAAGTTGAGTGGCATATCTGGATAGTGCACGAAACTTAGCCTCATATGCATTGACCGACATCCTACCTTCTCTAGGCTCAAGAACTCATCCCTTTTCCTATCCCTCAAAGTCCGGGGGATATACTTCTCCATAAACAAGCTAGAGAATGAGGCCCAAGTCATAGGTGGTGCCTTTGTTGGTTGACACTCAACATGTGAATGCCACCACATTTTGGCGTTCCCTTGAAACTGGTAAGTCACAAACTCAACACCAAACCGTTCTACTATACCCATCTTGTGTAATAGCTCATGACAGCCAACCAGAAGATCGTAGGCATCCTCAGATTTAGCACCCTTGAAGACCGGAGGTTTCAATTTCAAGAACTTACTAAAAATTTCATGCTGATCATTTATCATTATAGGCCCTGTAGTCAGACGAGGAAATGTGCCTATTTCCAGTGAGGCATCCATGCGGGGAGCCACAGTAGCCGCATATTGTACCTCCGGAACCTGAGGTGCTGGTGCAGAAAACACTGGAGGTGTCTGGCCTTGATCAGATAACCCGCTAAGATAAGCAAGAACCTGATTGATCATCTCTGGGGTAGGTTGGGGTGGCAATTCCTCATTCTGCACTTGTTCATTCTCCTTATCCTCCCCTTCTCTTACTACTTCCTCAGTCGGTGGAGGAGTCACCGCCCTAGTACCAGATGGGCTAGGTGCTTGTCCTCTTCCTCTAGAGGATGTCCTCCCACAACCTCTTCCACGGCCTCTTGCCGCTACTCTTCCTCTAGCTACAGTCCCACTGGCTGGTTCAGACGCACCCTATCCCGCCGGTGCTGGTGTTGGCGCGGTTGTTTCTCTAGTTCTAACCATCTACGAAATAGAGTGAAGATGGTCAGATACCAATTTGTATCACCTAGATACCAATTGGATCCAAGTAATAGCACGAAAGAAAGAAAGAAAGAATGGAATTTTCCTAAAGTCTTATAACCTCTCAAAGAAAAGTAAAGGCGTCCCCCTACCATCCCTTAAGACTCTAATAGACTCGTTCTTGTGTGATGAGACCAACGAACCTAATGCTCTGATACCAAGTTTGTCACGACCCAAAACCGAGCCGCGACTGGCACCCACACTTACCTTCCTATGTGAGAACCAACCAATCTAAACCTTAACATTTCAATGTAATATCATCATAAAATAATGCGAAAGACTTAAACTCATTAATAAAAACCAATTCAATAACTATTATTTCCCAAAATCTGGAAGTCATCATCACAAGAACATCTATGATCAAATTACTAAATCTAAGATTTTCTAAGAAGCTAAAAAATACATAAAAGCTAGTCCATGCCGGAACTTCAAGCATCAAGACATGAATAGGAAGATCCAGTCCAAGCTAGAAGCATTAGCTCACCCTGATATCCGAAGTAATGAAGACTGGCTAGAGTTACTGTTGAGTCGAAGATGACGGCACGTTTGCTGCGCTCCACAAATAAACAAGAAGAAAACATAAAAGTAGGGGTCAGTACAAAACACGGGTACTGAGTAGATATCATCGGCCAACTCAAAATAGAAATCAATATATACCAAGTAATATCATAAAATCAACTATGATACTCAACATGTAGCAACAGCAAGTACTATATCATTAACAATTATCGTCAAGTTCACACATGAGGACTCAAGCCTCAATACCATACTCATTTGGGAATTATGTTAATTAGATTGAGTATATTACCATCTTTCAAGATTCATTATCTTTATTTCTCTTGTGTCGGTACGTGACACTCCGCTCCCTCATATTCATTAATCCTCTTGTGTCGGTACGTGACACTCCGCTCCCCTAAATCTACGTGTCGGTTCGTGACACCCGATCCCCTAAATCTACGTGTCGGTTCGTGACACCCGATCCCCTAATCTCCTTCTATAAATTCATCAAGCCTTCTTTCTTACCAAGGCATCATCAATCTCATTATTTTAGTTCATCACGCCTTCTTTTATACCAAGGCCTCATTTTTAACAGAGAGATTAGGGTTTTGCAAGATTTGGGATTCAATAACTTCATCATGCTTATATAATCACAATTATATAATTACATTCATGCAAGCATACAATTAAGCACATAGCAGGGTTTACAATATTATCAATACATATCATTCGCTATTAAGAGTTTACTACGAATATTGTAAGAGAAACCATAACCTACCTCCACCGAAGATTA</genome_strand>
        <mrna_strand>TTATGTTCATTAGATTGAGTATA-TAACATCTTTCAAGATTCATTGTCTTTATTTCTCTTGTGTCGGTACGTGACATTCCGCTCCNTCATATTCATTAATCTTCTTGTGTCGGTACGTGATACTCTGATCCCCTAAATCTACGTGTCGGAACGTGACACTCCGATCCCCTAAATCTACGTGTCGGTTCGTGACACCTGATCCCCTAAATCTACGTGTCGGTTCGTGACACCCGATCCCCTAAATCTACGTGTCGGTTCGTGACACCCGATCCCCTAAATCTACGTGTCGGTTCGTGACACCCGATCCCCT-AATCTATGTGTTGGTTCGTGACACCTGATCCCTTA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTACGTGTCGGTTTGTGACACCCGATCCCCTAATTCTACGTGTCAGTTCGTGACACCCGATCCCCTAATCTCATTCTATCAATTCATCAAGCCTTCTCCCTTACCAAGGCATCATCAATCTCATTACTTTAGTTCATCAAGCCTTCTCCCTTACCAAGGCATCATCATTAA-AAAGAGATTAGGTTTTTACAAGATTTGGGATTCAATAACTTCATCATGCTTATATAATAACAATTATATAGTTACATTCATGCAAGCATACAATTAAGCACATAGCAGGGTTTACAATATTATCAATACATATCATTCTCTATTAAGAGTTTACTACGAATATCGTAAGAGAAACAATAACCTACCTCCACCGAAGACTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0002K14-GUpky/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E357559" ref_strand="+" ref_description="SGN-E357559 [cTOS-23-F2]">
      <seq>tagtcttcggtggaggtaggttattgtttctcttacgatattcgtagtaaactcttaatagagaatgatatgtattgataatattgtaaaccctgctatgtgcttaattgtatgcttgcatgaatgtaactatataattgttattatataagcatgatgaagttattgaatcccaaatcttgtaaaaacctaatctctttttaatgatgatgccttggtaagggagaaggcttgatgaactaaagtaatgagattgatgatgccttggtaagggagaaggcttgatgaattgatagaatgagattaggggatcgggtgtcacgaactgacacgtagaattaggggatcgggtgtcacaaaccgacacgtagattaagggatcaggtgtcacgaaccaacaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0002K14-GUpky/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0002K14.1" temp_strand="-" temp_description="C02SLe0002K14.1  AC215442.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0002K14 sequenced_by:kribb upload_account_name:korea">
        <position start="56933" stop="55931"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="56633" g_stop="56230" g_length="404"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="402" r_length="402" r_score="0.921"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0002K14.1" gen_strand="-" ref_id="SGN-E357559" ref_strand="+">
        <total_alignment_score>0.921</total_alignment_score>
        <cumulative_length_of_scored_exons>404</cumulative_length_of_scored_exons>
        <coverage percentage="1.005" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0002K14.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E357559" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="56633" e_stop="56230"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAATCTTCGGTGGAGGTAGGTTATGGTTTCTCTTACGATATTCGTAGTAAACTCTTAATAGCGAATGATATGTATTGATAATATTGTAAACCCTGCTATGTTCTTAATTGTATGCTTGCATGAATGTAATTATATAATTGTAATTATATAAGCATGATGAAGTTATTGAATCCCAAATCTTGCAAAACCCTAATCTCTTTGTTAATAATGAGGCCTTGGTATAAAAGAAGTCGTGATGAACTAAAATAATGAGATTGATGATGCCTTGGTAAGAAAGAAGGCTTGATGAATTGATAGAAGGAGATTAGGGGATCGGGTGTCCCGAACCGACACGTAGATTTAGAGGATCGGGTGTCACGAACCGACACGTAGATTTAGGGGATCGGGTGTCACAAACCGACACG</genome_strand>
        <mrna_strand>TAGTCTTCGGTGGAGGTAGGTTATTGTTTCTCTTACGATATTCGTAGTAAACTCTTAATAGAGAATGATATGTATTGATAATATTGTAAACCCTGCTATGTGCTTAATTGTATGCTTGCATGAATGTAACTATATAATTGTTATTATATAAGCATGATGAAGTTATTGAATCCCAAATCTTGTAAAAACCTAATCTCTTT-TTAATGATGATGCCTTGGTAAGGGAGAAGGCTTGATGAACTAAAGTAATGAGATTGATGATGCCTTGGTAAGGGAGAAGGCTTGATGAATTGATAGAATGAGATTAGGGGATCGGGTGTCACGAACTGACACGTAGAATTAGGGGATCGGGTGTCACAAACCGACACGTAGA-TTAAGGGATCAGGTGTCACGAACCAACACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0002K14-GUpky/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E379315" ref_strand="+" ref_description="SGN-E379315 [TUS-1-J2]">
      <seq>gaatcccttgacaaatcggcggtagtagctagctaacccaacaaagctccttatttctgacacattagtaggtcttacccaattcttcactgtctcaatcttagaaggatccaccatcactccatccttagaaaccacgttccccaagaaggacactacatctagccaaaactcacacttagagaacttggcataaaactttttctccctcaacatttccaataccattctcaaatgctcttcatgttcctccttacttttagagtatatcagtatatcatcaataaatacgatcacaaagagatccaaatatggcttaaaaatcccttttattaaactcataaacgcagcaggggcattcataagaccaaaagacatcactacaaatttgtaatgcccatacctggttctaaaagcagtctttggcacatccgttgcccgtattttcaattgatgataaccggatctcaagtcaatcttagaaaagacacaagcaccttgtaactgatcgaacaagtcattaatgcgaggaagaggatacttgttctttatggttaccttgttncactgccggtagcctatgcacatccgaaaactccaatccttcttctttacaaacaaaaccggagcaccccaaggagatgcagttggtctaatgaagcctttgctcacaactctttgaagtggtcttttaactctcttaactctgcgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0002K14-GUpky/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0002K14.1" temp_strand="+" temp_description="C02SLe0002K14.1  AC215442.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0002K14 sequenced_by:kribb upload_account_name:korea">
        <position start="59077" stop="60388"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59377" g_stop="60088" g_length="712"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="712" r_length="712" r_score="0.954"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0002K14.1" gen_strand="+" ref_id="SGN-E379315" ref_strand="+">
        <total_alignment_score>0.954</total_alignment_score>
        <cumulative_length_of_scored_exons>712</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0002K14.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E379315" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59377" e_stop="60088"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAATCCCTTGACAAATCGGCGGTAGTAGCTAGCTAACCCAACAAAGCTCCTTATTTCTGACACATTAGTAGGTCTTACCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCACGTGCCCCAAGAAGGACACTGCATCTAGCAAAAACTCACACTTAGAGAACTTGGTATAAAGCTTTTTCTCCCTCAACATTTCCAATACCATTCTCAAATGCTCCTTATGTTCCTCCTTACTTTTAGAGTATATCAGTATGTCATCAATAAATACGATCACAAAGAGATCCAAATATGGCTTAAAAATCCCGTTCATCAAACTCATGAACGCAGCAGGGGCATTCGTAAGACCAAAAGACATCACTACAAATTCGTAATGCCCATACCTAGTTCTAAAAGCGGTCTTTGGCACATCCGTTGCCCGTATTTTCAATTGATGATAGCCGGATCTCAAGTCAATCTTAGAGAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATCAATGCAAGGAAGAGGATACTTGTTCTTTATGGTTACCTTGTTCAACTGCCGGTAGTCTATGCACATCCGAAAACTCCCATCCTTCTTCTTTACAAACAAAACCGGAGCAC-CCAAGGAGATGCACTTGGTCTAATGAAGCCTTTGCTCAACAACTC-TTGAAGTTGTGCTTTTAACTCTCTTAACTCCGCGG</genome_strand>
        <mrna_strand>GAATCCCTTGACAAATCGGCGGTAGTAGCTAGCTAACCCAACAAAGCTCCTTATTTCTGACACATTAGTAGGTCTTACCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCACGTTCCCCAAGAAGGACACTACATCTAGCCAAAACTCACACTTAGAGAACTTGGCATAAAACTTTTTCTCCCTCAACATTTCCAATACCATTCTCAAATGCTCTTCATGTTCCTCCTTACTTTTAGAGTATATCAGTATATCATCAATAAATACGATCACAAAGAGATCCAAATATGGCTTAAAAATCCCTTTTATTAAACTCATAAACGCAGCAGGGGCATTCATAAGACCAAAAGACATCACTACAAATTTGTAATGCCCATACCTGGTTCTAAAAGCAGTCTTTGGCACATCCGTTGCCCGTATTTTCAATTGATGATAACCGGATCTCAAGTCAATCTTAGAAAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATTAATGCGAGGAAGAGGATACTTGTTCTTTATGGTTACCTTGTTNCACTGCCGGTAGCCTATGCACATCCGAAAACTCCAATCCTTCTTCTTTACAAACAAAACCGGAGCACCCCAAGGAGATGCAGTTGGTCTAATGAAGCCTTTGCTC-ACAACTCTTTGAAGTGGT-CTTTTAACTCTCTTAACTCTGCGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0002K14-GUpky/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E375319" ref_strand="+" ref_description="SGN-E375319 [TUS-15-F18]">
      <seq>gaatcccttgacaaatcggcggtagtagctagctaacccaacaaagctccttatttctgacacattagtaggtcttacccaattcttcactgtctcaatcttagaaggatccaccatcactccatccttagaaaccacgttccccaagaaggacactacatctagccaaaactcacacttagagaacttggcataaaactttttctccctcaacatttccaataccattctcaaatgctcttcatgttcctccttacttttagagtatatcagtatatcatcaataaatacgatcacaaagagatccaaatatggcttaaaaatcccttttattaaactcataaacgcagcaggggcattcataagaccaaaagacatcactacaaatttgtaatgcccatacctggttctaaaagcagtctttggcacatccgttgcccgtattttcaattgatgataaccggatctcaagtcaatcttagaaaagacacaagcaccttgtaactgatcgaacaagtcattaatgcgaggaagaggatacttgttctttatggttaccttgttcaactgccggtagcctatgcacatccgaaaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0002K14-GUpky/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0002K14.1" temp_strand="+" temp_description="C02SLe0002K14.1  AC215442.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0002K14 sequenced_by:kribb upload_account_name:korea">
        <position start="59077" stop="60272"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59377" g_stop="59972" g_length="596"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="596" r_length="596" r_score="0.965"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0002K14.1" gen_strand="+" ref_id="SGN-E375319" ref_strand="+">
        <total_alignment_score>0.965</total_alignment_score>
        <cumulative_length_of_scored_exons>596</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0002K14.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E375319" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59377" e_stop="59972"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAATCCCTTGACAAATCGGCGGTAGTAGCTAGCTAACCCAACAAAGCTCCTTATTTCTGACACATTAGTAGGTCTTACCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCACGTGCCCCAAGAAGGACACTGCATCTAGCAAAAACTCACACTTAGAGAACTTGGTATAAAGCTTTTTCTCCCTCAACATTTCCAATACCATTCTCAAATGCTCCTTATGTTCCTCCTTACTTTTAGAGTATATCAGTATGTCATCAATAAATACGATCACAAAGAGATCCAAATATGGCTTAAAAATCCCGTTCATCAAACTCATGAACGCAGCAGGGGCATTCGTAAGACCAAAAGACATCACTACAAATTCGTAATGCCCATACCTAGTTCTAAAAGCGGTCTTTGGCACATCCGTTGCCCGTATTTTCAATTGATGATAGCCGGATCTCAAGTCAATCTTAGAGAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATCAATGCAAGGAAGAGGATACTTGTTCTTTATGGTTACCTTGTTCAACTGCCGGTAGTCTATGCACATCCGAAAAC</genome_strand>
        <mrna_strand>GAATCCCTTGACAAATCGGCGGTAGTAGCTAGCTAACCCAACAAAGCTCCTTATTTCTGACACATTAGTAGGTCTTACCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCACGTTCCCCAAGAAGGACACTACATCTAGCCAAAACTCACACTTAGAGAACTTGGCATAAAACTTTTTCTCCCTCAACATTTCCAATACCATTCTCAAATGCTCTTCATGTTCCTCCTTACTTTTAGAGTATATCAGTATATCATCAATAAATACGATCACAAAGAGATCCAAATATGGCTTAAAAATCCCTTTTATTAAACTCATAAACGCAGCAGGGGCATTCATAAGACCAAAAGACATCACTACAAATTTGTAATGCCCATACCTGGTTCTAAAAGCAGTCTTTGGCACATCCGTTGCCCGTATTTTCAATTGATGATAACCGGATCTCAAGTCAATCTTAGAAAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATTAATGCGAGGAAGAGGATACTTGTTCTTTATGGTTACCTTGTTCAACTGCCGGTAGCCTATGCACATCCGAAAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0002K14-GUpky/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E204434" ref_strand="+" ref_description="SGN-E204434 [cLEC-13-J16]">
      <seq>gaatcccttgacaaatcggcggtagtagctagctaacccaacaaagctccttatttctgacacattagtaggtcttacccaattcttcactgtctcaatcttagaaggatccaccatcactccatccttagaaaccacgttccccaagaaggacactacatctagccaaaactcacacttagagaacttggcataaaactttttctccctcaacatttccaataccattctcaaatgctcttcatgttcctccttacttttagagtatatcagtatatcatcaataaatacgatcacaaagagatccaaatatggcttaaaaatcccttttattaaactcataaacgcagcaggggcattcataagaccaaaagacatcactacaaatttgtaatgcccatacctggttctaaaagcagtctttggcacatccgttgcccgtattttcaattgatgataaccggatctcaagtcaatcttagaaaagacacaagcaccttgtaactgatcgaacaagtcattaatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0002K14-GUpky/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0002K14.1" temp_strand="+" temp_description="C02SLe0002K14.1  AC215442.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0002K14 sequenced_by:kribb upload_account_name:korea">
        <position start="59077" stop="60202"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59377" g_stop="59902" g_length="526"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="526" r_length="526" r_score="0.964"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0002K14.1" gen_strand="+" ref_id="SGN-E204434" ref_strand="+">
        <total_alignment_score>0.964</total_alignment_score>
        <cumulative_length_of_scored_exons>526</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0002K14.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E204434" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59377" e_stop="59902"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAATCCCTTGACAAATCGGCGGTAGTAGCTAGCTAACCCAACAAAGCTCCTTATTTCTGACACATTAGTAGGTCTTACCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCACGTGCCCCAAGAAGGACACTGCATCTAGCAAAAACTCACACTTAGAGAACTTGGTATAAAGCTTTTTCTCCCTCAACATTTCCAATACCATTCTCAAATGCTCCTTATGTTCCTCCTTACTTTTAGAGTATATCAGTATGTCATCAATAAATACGATCACAAAGAGATCCAAATATGGCTTAAAAATCCCGTTCATCAAACTCATGAACGCAGCAGGGGCATTCGTAAGACCAAAAGACATCACTACAAATTCGTAATGCCCATACCTAGTTCTAAAAGCGGTCTTTGGCACATCCGTTGCCCGTATTTTCAATTGATGATAGCCGGATCTCAAGTCAATCTTAGAGAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATCAATG</genome_strand>
        <mrna_strand>GAATCCCTTGACAAATCGGCGGTAGTAGCTAGCTAACCCAACAAAGCTCCTTATTTCTGACACATTAGTAGGTCTTACCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCACGTTCCCCAAGAAGGACACTACATCTAGCCAAAACTCACACTTAGAGAACTTGGCATAAAACTTTTTCTCCCTCAACATTTCCAATACCATTCTCAAATGCTCTTCATGTTCCTCCTTACTTTTAGAGTATATCAGTATATCATCAATAAATACGATCACAAAGAGATCCAAATATGGCTTAAAAATCCCTTTTATTAAACTCATAAACGCAGCAGGGGCATTCATAAGACCAAAAGACATCACTACAAATTTGTAATGCCCATACCTGGTTCTAAAAGCAGTCTTTGGCACATCCGTTGCCCGTATTTTCAATTGATGATAACCGGATCTCAAGTCAATCTTAGAAAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATTAATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0002K14-GUpky/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E368762" ref_strand="+" ref_description="SGN-E368762 [TUS-22-P2]">
      <seq>gtctcacccaattcttcactgtctcaatcttacaaggatccaccatcactccatccttagaaaccacgtgccccaagaaggacactgcatctatccaaaactcacacttagagaacttggcataaagctttttctccctcaacatttctaatacaattctcaaatgctcctcatgttccttcttactattagagtatatcagtatatcatcaataaacatgatgacaaagagatccaaatatggcttaaaatcccgttcatcaagctcatgaacgcagcaggggcattcgtaagaccaaaagacatcactacaaattcgtaatgcccatacctggttctaaaagcagtctttggcacatccgttgcccgtattttcaattgatgataaccggatctcaagtcaatcttagagaagacacaagcaccttgtaactgatcgaacaagtcatcaatgcgaggaagtggatacttgttcttaatagttaccttgttcaactgccggtagtctatgcacatccgaaaactcccatccttcttcttcacaaaccaaaccggagcaccccaaggagatgcacttggtctaatgaagactttgctcaaaaactcttgaagttgggcctttaactctcttaactccgcgggagccattctataagggggtatagaaatggggcgagtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0002K14-GUpky/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0002K14.1" temp_strand="+" temp_description="C02SLe0002K14.1  AC215442.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0002K14 sequenced_by:kribb upload_account_name:korea">
        <position start="59148" stop="60425"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59448" g_stop="60126" g_length="679"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="679" r_length="679" r_score="0.953"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0002K14.1" gen_strand="+" ref_id="SGN-E368762" ref_strand="+">
        <total_alignment_score>0.953</total_alignment_score>
        <cumulative_length_of_scored_exons>679</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0002K14.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E368762" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59448" e_stop="60126"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCTTACCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCACGTGCCCCAAGAAGGACACTGCATCTAGCAAAAACTCACACTTAGAGAACTTGGTATAAAGCTTTTTCTCCCTCAACATTTCCAATACCATTCTCAAATGCTCCTTATGTTCCTCCTTACTTTTAGAGTATATCAGTATGTCATCAATAAATACGATCACAAAGAGATCCAAATATGGCTTAAAAATCCCGTTCATCAAACTCATGAACGCAGCAGGGGCATTCGTAAGACCAAAAGACATCACTACAAATTCGTAATGCCCATACCTAGTTCTAAAAGCGGTCTTTGGCACATCCGTTGCCCGTATTTTCAATTGATGATAGCCGGATCTCAAGTCAATCTTAGAGAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATCAATGCAAGGAAGAGGATACTTGTTCTTTATGGTTACCTTGTTCAACTGCCGGTAGTCTATGCACATCCGAAAACTCCCATCCTTCTTCTTTACAAACAAAACCGGAGCA-CCCAAGGAGATGCACTTGGTCTAATGAAGCCTTTGCTCAACAACTCTTGAAGTTGTGCTTTTAACTCTCTTAACTCCGCGGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGAGTA</genome_strand>
        <mrna_strand>GTCTCACCCAATTCTTCACTGTCTCAATCTTACAAGGATCCACCATCACTCCATCCTTAGAAACCACGTGCCCCAAGAAGGACACTGCATCTATCCAAAACTCACACTTAGAGAACTTGGCATAAAGCTTTTTCTCCCTCAACATTTCTAATACAATTCTCAAATGCTCCTCATGTTCCTTCTTACTATTAGAGTATATCAGTATATCATCAATAAACATGATGACAAAGAGATCCAAATATGGCTT-AAAATCCCGTTCATCAAGCTCATGAACGCAGCAGGGGCATTCGTAAGACCAAAAGACATCACTACAAATTCGTAATGCCCATACCTGGTTCTAAAAGCAGTCTTTGGCACATCCGTTGCCCGTATTTTCAATTGATGATAACCGGATCTCAAGTCAATCTTAGAGAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATCAATGCGAGGAAGTGGATACTTGTTCTTAATAGTTACCTTGTTCAACTGCCGGTAGTCTATGCACATCCGAAAACTCCCATCCTTCTTCTTCACAAACCAAACCGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAGACTTTGCTCAAAAACTCTTGAAGTTGGGCCTTTAACTCTCTTAACTCCGCGGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGAGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0002K14-GUpky/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E240817" ref_strand="+" ref_description="SGN-E240817 [cLED-24-J5]">
      <seq>gtctcacccatttcttcactgtctcaatcttaccaggatccaccatcactccatccttagaaaccacgtgccccaagaaggacactgcatctatccaaaactcacacttagagaacttggcataaagctttttctccctcaacatttctaatacaattctcaaatgctcctcatgttccttcttactattagaggatatcagtatatcatcaatgaacatgatgacgcagagatccaaatatggcttaaaatcccgttcatcaagctcatgaacgcagcaggggcattcgtaagaccaaaagacatcactacaaattcgtaatgcccatacctggttctaaaagcagtctttggcaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0002K14-GUpky/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0002K14.1" temp_strand="+" temp_description="C02SLe0002K14.1  AC215442.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0002K14 sequenced_by:kribb upload_account_name:korea">
        <position start="59148" stop="60106"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59448" g_stop="59806" g_length="359"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="358" r_length="358" r_score="0.933"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0002K14.1" gen_strand="+" ref_id="SGN-E240817" ref_strand="+">
        <total_alignment_score>0.933</total_alignment_score>
        <cumulative_length_of_scored_exons>359</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0002K14.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E240817" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59448" e_stop="59806"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCTTACCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCACGTGCCCCAAGAAGGACACTGCATCTAGCAAAAACTCACACTTAGAGAACTTGGTATAAAGCTTTTTCTCCCTCAACATTTCCAATACCATTCTCAAATGCTCCTTATGTTCCTCCTTACTTTTAGAGTATATCAGTATGTCATCAATAAATACGATCACAAAGAGATCCAAATATGGCTTAAAAATCCCGTTCATCAAACTCATGAACGCAGCAGGGGCATTCGTAAGACCAAAAGACATCACTACAAATTCGTAATGCCCATACCTAGTTCTAAAAGCGGTCTTTGGCACA</genome_strand>
        <mrna_strand>GTCTCACCCATTTCTTCACTGTCTCAATCTTACCAGGATCCACCATCACTCCATCCTTAGAAACCACGTGCCCCAAGAAGGACACTGCATCTATCCAAAACTCACACTTAGAGAACTTGGCATAAAGCTTTTTCTCCCTCAACATTTCTAATACAATTCTCAAATGCTCCTCATGTTCCTTCTTACTATTAGAGGATATCAGTATATCATCAATGAACATGATGACGCAGAGATCCAAATATGGCTT-AAAATCCCGTTCATCAAGCTCATGAACGCAGCAGGGGCATTCGTAAGACCAAAAGACATCACTACAAATTCGTAATGCCCATACCTGGTTCTAAAAGCAGTCTTTGGCACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0002K14-GUpky/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E355232" ref_strand="+" ref_description="SGN-E355232 [cTOS-18-A6]">
      <seq>tcaatgcgaggaagaggatacttgttcttaatagttaccttgttcagttgtctgtagtctatgcacattctaaaacttccatccttcttcttcacaaataaaactggagcaccccaaggagatgcacttggtctaatgaagaccttgctcaacaactcttgaagttgagcctttaactctcttaattcggcgggagccattctataagggggtatagaaatggggcgtgtgcctggttcaagatcgatacagaagtcaatatccctatctggtggcataccaggaagatctgcaggaaacacgtccaaaaactcgcggactaccgaaaccgactcaattgagggtacttgagtagtgtcatccttgagatgtgccaagaaagctgaacaccctttactaaccattttcttagcacgaagaaaggatatgatacgcaccagattggaagtgtagtcaccctcccacactaacggatctgtcccaggcttggctaacgtcaccgttttagcattacaatccaagatcgcaaaatttggagaaagccaagtcatacccagaattacatcaatgtcacccatttctaaaaaaccaaatctacataagtgttgctccccacgaaattcnacaaaacagaactatgtaccttttcaactaccac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0002K14-GUpky/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0002K14.1" temp_strand="+" temp_description="C02SLe0002K14.1  AC215442.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0002K14 sequenced_by:kribb upload_account_name:korea">
        <position start="59597" stop="60854"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59897" g_stop="60554" g_length="658"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="658" r_length="658" r_score="0.918"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0002K14.1" gen_strand="+" ref_id="SGN-E355232" ref_strand="+">
        <total_alignment_score>0.918</total_alignment_score>
        <cumulative_length_of_scored_exons>658</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0002K14.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E355232" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59897" e_stop="60554"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAATGCAAGGAAGAGGATACTTGTTCTTTATGGTTACCTTGTTCAACTGCCGGTAGTCTATGCACATCCGAAAACTCCCATCCTTCTTCTTTACAAACAAAACCGGAGCA-CCCAAGGAGATGCACTTGGTCTAATGAAGCCTTTGCTCAACAACTCTTGAAGTTGTGCTTTTAACTCTCTTAACTCCGCGGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGAGTACCGGGTTCAAGATCAATATAGAAGTCAATATCCCTATCTGGTGGCATACCAGGAAGATCTGCAGGGAACACATCCAGAAACTCACGGACCACCGAAACCGACTCAATCGAAGGTACTTGGGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTAAACACCCTTTACTAACCATTTTCTTAGCACGAAGAAAGGAGATGATACACACCGGATTGGAAGTGTAGTCACCTTCCCACACTAACGGATCTGTCCCAGGCTTGGCTAACGTCACCGTTTTAGCATTACAATCCAAGATCGCAAATTGCGGAGAAAGCCAAGTCATACCCAGAATTACATCAAAATCATCCATTTCTAAGATAACCAAATCTACATAAGTGTTGCTCCCCACGAAGTTCACCAAACAAGACCTATATACCTTTTCAACTACCAC</genome_strand>
        <mrna_strand>TCAATGCGAGGAAGAGGATACTTGTTCTTAATAGTTACCTTGTTCAGTTGTCTGTAGTCTATGCACATTCTAAAACTTCCATCCTTCTTCTTCACAAATAAAACTGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAGACCTTGCTCAACAACTCTTGAAGTTGAGCCTTTAACTCTCTTAATTCGGCGGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGTGTGCCTGGTTCAAGATCGATACAGAAGTCAATATCCCTATCTGGTGGCATACCAGGAAGATCTGCAGGAAACACGTCCAAAAACTCGCGGACTACCGAAACCGACTCAATTGAGGGTACTTGAGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTGAACACCCTTTACTAACCATTTTCTTAGCACGAAGAAAGGATATGATACGCACCAGATTGGAAGTGTAGTCACCCTCCCACACTAACGGATCTGTCCCAGGCTTGGCTAACGTCACCGTTTTAGCATTACAATCCAAGATCGCAAAATTTGGAGAAAGCCAAGTCATACCCAGAATTACATCAATGTCACCCATTTCTAA-AAAACCAAATCTACATAAGTGTTGCTCCCCACGAAATTCNACAAAACAGAACTATGTACCTTTTCAACTACCAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0002K14-GUpky/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E353359" ref_strand="-" ref_description="SGN-E353359 [cTOS-15-G18]">
      <seq>gcaaggtaggatgtaggtcaatgcatatgaggctaagtttcgtgcactatccagatatgccactcaactttgtttcagtccacaagagaggattcgtcgttttgtgaaagggttgaggtcagagttgcggatttcagcgttacaggtagcggctacggcaaaatccttgcaagaaatggttgacttcgatgtaattctgggtatgacttggctttctccaaattttgcaatcttggattgtaatgctaaaaccgtgacgttagccaagcctgggacagatctgttagtgtaggagggtgactacacttccaatccggtgcgtatcatctcctttcttcgtgctaagaaaatggttagtaaagggtgtttagctttcttggcacatctcaaggataacactacccaagtaccttcgattgactcagtttcagtagttcgtgagtttatggatgtgttccctgcagatcatcctggtatgccaccggatagggatattgacttctgtattgatctcgaaccgggcacacgccccatttttatacccccttatagaatggctcccgcagagttaagagagttaaaggcacaacttcaagagttattgaacaaaggcttcattagaccaagtgcatctccttggggtgctccggttttgttgtaaagatcggcagtttttgaatgtgcatagactaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0002K14-GUpky/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0002K14.1" temp_strand="-" temp_description="C02SLe0002K14.1  AC215442.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0002K14 sequenced_by:kribb upload_account_name:korea">
        <position start="61690" stop="59685"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="61392" g_stop="61220" g_length="173"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="173" r_length="173" r_score="0.936"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="61219" i_stop="60476" i_length="744">
            <donor d_prob="0.000" d_score="0.92"/>
            <acceptor a_prob="0.000" a_score="0.88"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="60475" g_stop="59949" g_length="527"/>
          <reference_exon_boundary r_type="cDNA" r_start="174" r_stop="694" r_length="521" r_score="0.913"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0002K14.1" gen_strand="-" ref_id="SGN-E353359" ref_strand="-">
        <total_alignment_score>0.919</total_alignment_score>
        <cumulative_length_of_scored_exons>700</cumulative_length_of_scored_exons>
        <coverage percentage="1.009" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0002K14.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E353359" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="61392" e_stop="61220"/>
          <exon e_start="60475" e_stop="59949"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAGGTAGGATGTCGGTCAATGCATATGAGGCTAAGTTTCGTGCACTATCCAGATATGCCACTCAACTTTGTTTCAGTCCACAAGAGCGGATTCGTCATTCTGTGAAGGGGTTGAGGTCAGAGTTGTGGATTTCAGCCTTACAGGTAGCGGCTATGGCAAAATCCTTCCAAGAAGTGGTAGATTTCGTGGTAGAGGTGGAAGGAGTGAAGCCAGATGAATTCACCATGGCATCGACATCAAAGAGGTTTCGAAAGGGAGGTGAGTTTAATGGTTCTTACTCTAGAGGACAGGGTTCCGGAGGTTACTCAGTTCGACCCATTCAATCTTCACTACAGACTGTAGTTGGGGGTCCACCTCAGACCGGTCAACACTTCTCTGAGAGACCTATGCTTGACTCCAGAGAGTGTTATGGATGTGGGGAGACTGGACATATTAGGAGGAATTGTCCAAAACAGAGTTATAGATCCCCAATGGCTAGAGGTAGAGGTGGTCATGGTAGAGGCCGTTATTCTGGAGGACGTGGTGGTCGAGGTAATGGTGGTCACCAAAATGGCCGAGGTGGTGGGCAAACTAGAGCCACTACATCACAACATGGTAGGGGCAATGGACAGACAAACGATAGGGCCCATTGTTACGCTTTCCCTGGGCGGTCTGAAGCGGAGGCATCTGATGCTGTCATCACAGGTAATCTTCTGGTTTGTGATTGCATGGCTTATGTATTGTTTGATCCTGGATCCACATTTTCTTATGTATCTTCCTCATTTGCTAATGGTCTAAATTTACATTGTGAATTACTTGATATGCCTATTCGTGTTTCTACACCGGTGGGTGAGTCTGTGGTAGTTGAAAAGGTATATAGGTCTTGTTTGGTGAACTTCGTGGGGAGCAACACTTATGTAGATTTGGTTATCTTAGAAATGGATGATTTTGATGTAATTCTGGGTATGACTTGGCTTTCTCCGCAATTTGCGATCTTGGATTGTAATGCTAAAACGGTGACGTTAGCCAAGCCTGGGACAGATCCGTTAGTGTGGGAAGGTGACTACACTTCCAATCCGGTGTGTATCATCTCCTTTCTTCGTGCTAAGAAAATGGTTAGTAAAGGGTGTTTAGCTTTCTTGGCACATCTCAAGGATGACACTACCCAAGTACCTTCGATTGAGTCGGTTTCGGTGGTCCGTGAGTTTCTGGATGTGTTCCCTGCAGATCTTCCTGGTATGCCACCAGATAGGGATATTGACTTCTATATTGATCTTGAACCCGGTACTCGCCCCATTTCTATACCCCCTTATAGAATGGCTCCCGCGGAGTTAAGAGAGTTAAAAGCACAACTTCAAGAGTTGTTGAGCAAAGGCTTCATTAGACCAAGTGCATCTCCTT-GGGTGCTCCGGTTTTGTTTGTAAAGAAGAAGGATGGGAGTTTTCGGATGTGCATAGACTACC</genome_strand>
        <mrna_strand>GCAAGGTAGGATGTAGGTCAATGCATATGAGGCTAAGTTTCGTGCACTATCCAGATATGCCACTCAACTTTGTTTCAGTCCACAAGAGAGGATTCGTCGTTTTGTGAAAGGGTTGAGGTCAGAGTTGCGGATTTCAGCGTTACAGGTAGCGGCTACGGCAAAATCCTTGCAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATGGTTGACTTCGATGTAATTCTGGGTATGACTTGGCTTTCTCCAAATTTTGCAATCTTGGATTGTAATGCTAAAACCGTGACGTTAGCCAAGCCTGGGACAGATCTGTTAGTGTAGGAGGGTGACTACACTTCCAATCCGGTGCGTATCATCTCCTTTCTTCGTGCTAAGAAAATGGTTAGTAAAGGGTGTTTAGCTTTCTTGGCACATCTCAAGGATAACACTACCCAAGTACCTTCGATTGACTCAGTTTCAGTAGTTCGTGAGTTTATGGATGTGTTCCCTGCAGATCATCCTGGTATGCCACCGGATAGGGATATTGACTTCTGTATTGATCTCGAACCGGGCACACGCCCCATTTTTATACCCCCTTATAGAATGGCTCCCGCAGAGTTAAGAGAGTTAAAGGCACAACTTCAAGAGTTATTGAACAAAGGCTTCATTAGACCAAGTGCATCTCCTTGGGGTGCTCCGGTTTTG-TTGT--A-AAG-A--TCGGCAGTTTTTGAATGTGCATAGACTACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0002K14-GUpky/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E355244" ref_strand="+" ref_description="SGN-E355244 [cTOS-18-K20]">
      <seq>cggaaactcccatccttcttcttcacaaacaaaatcggagcaccccaaggagatgcacttggtctaatgaaacctttgctcaacaactcttgaagttgggcctttaactctcttaactctacgggagccattctataagggggtatagaaatggggcgtgtgcccggttcaagatcgatacagaagtcaatatccctatctggtggcataccaggaagatctgcagggaacacatccaaaaactcacagactataaaaaccgactcaatcgaaggtacttgggtagtgtcatccttgagatgtgccaagaaagctaaacaccctttactaaccattttcttagcacgaagaaaggagatgatgcacaccggattggaagtgtagtcaccctcccacactaacggatctgtcccaggcttggctaatgtcaccgttttagcattacaatccaagatcgcaaattgcggagaaagccaagtcatacccagaattacatcaaaatcaaccatttctaagataaccaaatctacataagtgttgctccccacaaagttcaccaaacaagacctatataccttttcaactaccacagactcacccaccggagtagaaacacgaataggcatatcaagtaattcacaatgtaaatttagaccgttagcaaatgaggaagatacantagaaaacgtggatcccaggatcaacaatacagaagccatgcaatcacaatcgaaagattacctgtgatgacagcatctaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0002K14-GUpky/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0002K14.1" temp_strand="+" temp_description="C02SLe0002K14.1  AC215442.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0002K14 sequenced_by:kribb upload_account_name:korea">
        <position start="59666" stop="61026"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59966" g_stop="60726" g_length="761"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="761" r_length="761" r_score="0.947"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0002K14.1" gen_strand="+" ref_id="SGN-E355244" ref_strand="+">
        <total_alignment_score>0.947</total_alignment_score>
        <cumulative_length_of_scored_exons>761</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0002K14.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E355244" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59966" e_stop="60726"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGAAAACTCCCATCCTTCTTCTTTACAAACAAAACCGGAGCAC-CCAAGGAGATGCACTTGGTCTAATGAAGCCTTTGCTCAACAACTCTTGAAGTTGTGCTTTTAACTCTCTTAACTCCGCGGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGAGTACCGGGTTCAAGATCAATATAGAAGTCAATATCCCTATCTGGTGGCATACCAGGAAGATCTGCAGGGAACACATCCAGAAACTCACGGACCACCGAAACCGACTCAATCGAAGGTACTTGGGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTAAACACCCTTTACTAACCATTTTCTTAGCACGAAGAAAGGAGATGATACACACCGGATTGGAAGTGTAGTCACCTTCCCACACTAACGGATCTGTCCCAGGCTTGGCTAACGTCACCGTTTTAGCATTACAATCCAAGATCGCAAATTGCGGAGAAAGCCAAGTCATACCCAGAATTACATCAAAATCATCCATTTCTAAGATAACCAAATCTACATAAGTGTTGCTCCCCACGAAGTTCACCAAACAAGACCTATATACCTTTTCAACTACCACAGACTCACCCACCGGTGTAGAAACACGAATAGGCATATCAAGTAATTCACAATGTAAATTTAGACCATTAGCAAATGAGGAAGATACATAAGAAAATGTGGAT-CCAGGATCAAACAATACATAAGCCATGCAATCACAAACCAGAAGATTACCTGTGATGACAGCATCAGAT</genome_strand>
        <mrna_strand>CGGAAACTCCCATCCTTCTTCTTCACAAACAAAATCGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAACCTTTGCTCAACAACTCTTGAAGTTGGGCCTTTAACTCTCTTAACTCTACGGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGTGTGCCCGGTTCAAGATCGATACAGAAGTCAATATCCCTATCTGGTGGCATACCAGGAAGATCTGCAGGGAACACATCCAAAAACTCACAGACTATAAAAACCGACTCAATCGAAGGTACTTGGGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTAAACACCCTTTACTAACCATTTTCTTAGCACGAAGAAAGGAGATGATGCACACCGGATTGGAAGTGTAGTCACCCTCCCACACTAACGGATCTGTCCCAGGCTTGGCTAATGTCACCGTTTTAGCATTACAATCCAAGATCGCAAATTGCGGAGAAAGCCAAGTCATACCCAGAATTACATCAAAATCAACCATTTCTAAGATAACCAAATCTACATAAGTGTTGCTCCCCACAAAGTTCACCAAACAAGACCTATATACCTTTTCAACTACCACAGACTCACCCACCGGAGTAGAAACACGAATAGGCATATCAAGTAATTCACAATGTAAATTTAGACCGTTAGCAAATGAGGAAGATACANTAGAAAACGTGGATCCCAGGATC-AACAATACAGAAGCCATGCAATCACAATCGA-AAGATTACCTGTGATGACAGCATCTAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0002K14-GUpky/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E351414" ref_strand="+" ref_description="SGN-E351414 [cTOS-12-D7]">
      <seq>cggaaactcccatccttcttcttcacaaacaaaatcggagcaccccaaggagatgcacttggtctaatgaaacctttgctcaacaactcttgaagttgggcctttaactctcttaactctacgggagccattctataagggggtatagaaatggggcgtgtgcccggttcaagatcgatacagaagtcaatatccctatctggtggcataccaggaagatctgcagggaacacatccaaaaactcacagactataaaaaccgactcaatcgaaggtacttgggtagtgtcatccttgagatgtgccaagaaagctaaacaccctttactaaccattttcttagcacgaagaaaggagatgatgcacaccggattggaagtgtagtcaccctcccacactaacggatctgtcccaggcttggctaatgtcaccgttttagcattacaatccaagatcgcaaattgcggagaaagccaagtcatacccagaattacatcaaaatcaaccatttctaagataaccaaatctacataagtgttgctccccacaaagttcaccaaacaagacctatataccttttcaactaccacagactcacccaccggagtagaaacacgaataggcatatcaagtaattcacaatgtaaatttagaccgttag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0002K14-GUpky/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0002K14.1" temp_strand="+" temp_description="C02SLe0002K14.1  AC215442.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0002K14 sequenced_by:kribb upload_account_name:korea">
        <position start="59666" stop="60925"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59966" g_stop="60625" g_length="660"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="661" r_length="661" r_score="0.958"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0002K14.1" gen_strand="+" ref_id="SGN-E351414" ref_strand="+">
        <total_alignment_score>0.958</total_alignment_score>
        <cumulative_length_of_scored_exons>660</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0002K14.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E351414" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59966" e_stop="60625"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGAAAACTCCCATCCTTCTTCTTTACAAACAAAACCGGAGCAC-CCAAGGAGATGCACTTGGTCTAATGAAGCCTTTGCTCAACAACTCTTGAAGTTGTGCTTTTAACTCTCTTAACTCCGCGGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGAGTACCGGGTTCAAGATCAATATAGAAGTCAATATCCCTATCTGGTGGCATACCAGGAAGATCTGCAGGGAACACATCCAGAAACTCACGGACCACCGAAACCGACTCAATCGAAGGTACTTGGGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTAAACACCCTTTACTAACCATTTTCTTAGCACGAAGAAAGGAGATGATACACACCGGATTGGAAGTGTAGTCACCTTCCCACACTAACGGATCTGTCCCAGGCTTGGCTAACGTCACCGTTTTAGCATTACAATCCAAGATCGCAAATTGCGGAGAAAGCCAAGTCATACCCAGAATTACATCAAAATCATCCATTTCTAAGATAACCAAATCTACATAAGTGTTGCTCCCCACGAAGTTCACCAAACAAGACCTATATACCTTTTCAACTACCACAGACTCACCCACCGGTGTAGAAACACGAATAGGCATATCAAGTAATTCACAATGTAAATTTAGACCATTAG</genome_strand>
        <mrna_strand>CGGAAACTCCCATCCTTCTTCTTCACAAACAAAATCGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAACCTTTGCTCAACAACTCTTGAAGTTGGGCCTTTAACTCTCTTAACTCTACGGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGTGTGCCCGGTTCAAGATCGATACAGAAGTCAATATCCCTATCTGGTGGCATACCAGGAAGATCTGCAGGGAACACATCCAAAAACTCACAGACTATAAAAACCGACTCAATCGAAGGTACTTGGGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTAAACACCCTTTACTAACCATTTTCTTAGCACGAAGAAAGGAGATGATGCACACCGGATTGGAAGTGTAGTCACCCTCCCACACTAACGGATCTGTCCCAGGCTTGGCTAATGTCACCGTTTTAGCATTACAATCCAAGATCGCAAATTGCGGAGAAAGCCAAGTCATACCCAGAATTACATCAAAATCAACCATTTCTAAGATAACCAAATCTACATAAGTGTTGCTCCCCACAAAGTTCACCAAACAAGACCTATATACCTTTTCAACTACCACAGACTCACCCACCGGAGTAGAAACACGAATAGGCATATCAAGTAATTCACAATGTAAATTTAGACCGTTAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0002K14-GUpky/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E355026" ref_strand="+" ref_description="SGN-E355026 [cTOS-19-F16]">
      <seq>gaacacatccaaaaattctcaaactaccaaaactaattcaattgagggtacttggatagtgtcatccttgagatgtgccaagaaggatagacaacccttactaaccatcttctgagcacaaagaaaggagataatacgcaccggattggaagtgtagtcaccctcccacactaacggatctgtcccaggcttggctaacgtcaccgttttagcattacaatccaagatcgcaaaattgggagaaagccaagtcatacccagaattacatcaaagtcacccatttctaaagtaaccaaatctagataagtgttgctccccacgaaattcaccaaacaagacctatgtaccttttcaactatcacagactcacccaccggagtagaaacacgaataggcatgtcaagtaattcacaatgcaattttagaccattagcaaatgatgaagatacatatgaaaacgtggagccagggtcaaataatacagatgccatgcaatcacaaaccaagagattacctgtgataacagcatcagacgcctctgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0002K14-GUpky/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0002K14.1" temp_strand="+" temp_description="C02SLe0002K14.1  AC215442.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0002K14 sequenced_by:kribb upload_account_name:korea">
        <position start="59892" stop="61034"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="60192" g_stop="60734" g_length="543"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="543" r_length="543" r_score="0.904"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0002K14.1" gen_strand="+" ref_id="SGN-E355026" ref_strand="+">
        <total_alignment_score>0.904</total_alignment_score>
        <cumulative_length_of_scored_exons>543</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0002K14.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E355026" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="60192" e_stop="60734"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAACACATCCAGAAACTCACGGACCACCGAAACCGACTCAATCGAAGGTACTTGGGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTAAACACCCTTTACTAACCATTTTCTTAGCACGAAGAAAGGAGATGATACACACCGGATTGGAAGTGTAGTCACCTTCCCACACTAACGGATCTGTCCCAGGCTTGGCTAACGTCACCGTTTTAGCATTACAATCCAAGATCGCAAATTGCGGAGAAAGCCAAGTCATACCCAGAATTACATCAAAATCATCCATTTCTAAGATAACCAAATCTACATAAGTGTTGCTCCCCACGAAGTTCACCAAACAAGACCTATATACCTTTTCAACTACCACAGACTCACCCACCGGTGTAGAAACACGAATAGGCATATCAAGTAATTCACAATGTAAATTTAGACCATTAGCAAATGAGGAAGATACATAAGAAAATGTGGATCCAGGATCAAACAATACATAAGCCATGCAATCACAAACCAGAAGATTACCTGTGATGACAGCATCAGATGCCTCCGC</genome_strand>
        <mrna_strand>GAACACATCCAAAAATTCTCAAACTACCAAAACTAATTCAATTGAGGGTACTTGGATAGTGTCATCCTTGAGATGTGCCAAGAAGGATAGACAACCCTTACTAACCATCTTCTGAGCACAAAGAAAGGAGATAATACGCACCGGATTGGAAGTGTAGTCACCCTCCCACACTAACGGATCTGTCCCAGGCTTGGCTAACGTCACCGTTTTAGCATTACAATCCAAGATCGCAAAATTGGGAGAAAGCCAAGTCATACCCAGAATTACATCAAAGTCACCCATTTCTAAAGTAACCAAATCTAGATAAGTGTTGCTCCCCACGAAATTCACCAAACAAGACCTATGTACCTTTTCAACTATCACAGACTCACCCACCGGAGTAGAAACACGAATAGGCATGTCAAGTAATTCACAATGCAATTTTAGACCATTAGCAAATGATGAAGATACATATGAAAACGTGGAGCCAGGGTCAAATAATACAGATGCCATGCAATCACAAACCAAGAGATTACCTGTGATAACAGCATCAGACGCCTCTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0002K14-GUpky/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E352716" ref_strand="+" ref_description="SGN-E352716 [cTOS-11-H19]">
      <seq>gatctgtcccaggcttggctaacgtcacagttttagcattacaatccaagattgcaaaatttggagaaagccaagtcatacccagaattacatcaaaatcaaccatttctaagataaccaagtctacataagtattgctccccacaaaagtcaccagaccagacctatatactttttcaactatcacagactcacccaccggagtagaaacacgaataggcatgtcaagcaattcataatttaatttaagaccagtagcaaatgaggaagatacatatgaaaatgtggatccagggtcaaataatacaaaagccatgcaatcacaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0002K14-GUpky/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0002K14.1" temp_strand="+" temp_description="C02SLe0002K14.1  AC215442.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0002K14 sequenced_by:kribb upload_account_name:korea">
        <position start="60068" stop="60994"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="60368" g_stop="60698" g_length="331"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="331" r_length="331" r_score="0.909"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0002K14.1" gen_strand="+" ref_id="SGN-E352716" ref_strand="+">
        <total_alignment_score>0.909</total_alignment_score>
        <cumulative_length_of_scored_exons>331</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0002K14.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E352716" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="60368" e_stop="60698"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATCTGTCCCAGGCTTGGCTAACGTCACCGTTTTAGCATTACAATCCAAGATCGCAAATTGCGGAGAAAGCCAAGTCATACCCAGAATTACATCAAAATCATCCATTTCTAAGATAACCAAATCTACATAAGTGTTGCTCCCCACGAAGTTCACCAAACAAGACCTATATACCTTTTCAACTACCACAGACTCACCCACCGGTGTAGAAACACGAATAGGCATATCAAGTAATTCACAATGTAAATTTAGACCATTAGCAAATGAGGAAGATACATAAGAAAATGTGGATCCAGGATCAAACAATACATAAGCCATGCAATCACAAACCAG</genome_strand>
        <mrna_strand>GATCTGTCCCAGGCTTGGCTAACGTCACAGTTTTAGCATTACAATCCAAGATTGCAAAATTTGGAGAAAGCCAAGTCATACCCAGAATTACATCAAAATCAACCATTTCTAAGATAACCAAGTCTACATAAGTATTGCTCCCCACAAAAGTCACCAGACCAGACCTATATACTTTTTCAACTATCACAGACTCACCCACCGGAGTAGAAACACGAATAGGCATGTCAAGCAATTCATAATTTAATTTAAGACCAGTAGCAAATGAGGAAGATACATATGAAAATGTGGATCCAGGGTCAAATAATACAAAAGCCATGCAATCACAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0002K14-GUpky/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E244046" ref_strand="+" ref_description="SGN-E244046 [cLEE-1-H7]">
      <seq>aaacacgaataggcatatcaagtaattcacaatgtaaagttagaccattagcaaatgaggaagatacataagaaaatgtggatccaggatcaaacaatacagaagccatgcaatcacaaaccaaaagattacctgtgatgacaacatcagattcctccgcttcagaccgcccagggaaagcgtaacaatgggccctatcattcttatgtctgttgcccctaccatgttgtgatgtagtggctccagtttgcccatcacctcggccgttttggtgaccaccatttcctcgaccgccacgtcctccagaataacggactctgccatgaccacctctacctctaacctttggaggtctgtaactctgttttggacaatatctcttaatatgtccaatctccccacacccatagcactctctgggttcatgcataagtctctcagagaagtgttgaccggtcgaaggtggacccccaactacagtctgtagtgaagactgaattggtcggactgagtaacttcccgaaccctgtcctctagtgtaagcaccattaaactcacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0002K14-GUpky/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0002K14.1" temp_strand="+" temp_description="C02SLe0002K14.1  AC215442.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0002K14 sequenced_by:kribb upload_account_name:korea">
        <position start="60275" stop="61433"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="60575" g_stop="61133" g_length="559"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="559" r_length="559" r_score="0.925"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0002K14.1" gen_strand="+" ref_id="SGN-E244046" ref_strand="+">
        <total_alignment_score>0.925</total_alignment_score>
        <cumulative_length_of_scored_exons>559</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0002K14.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E244046" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="60575" e_stop="61133"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAACACGAATAGGCATATCAAGTAATTCACAATGTAAATTTAGACCATTAGCAAATGAGGAAGATACATAAGAAAATGTGGATCCAGGATCAAACAATACATAAGCCATGCAATCACAAACCAGAAGATTACCTGTGATGACAGCATCAGATGCCTCCGCTTCAGACCGCCCAGGGAAAGCGTAACAATGGGCCCTATCGTTTGTCTGTCCATTGCCCCTACCATGTTGTGATGTAGTGGCTCTAGTTTGCCCACCACCTCGGCCATTTTGGTGACCACCATTACCTCGACCACCACGTCCTCCAGAATAACGGCCTCTACCATGACCACCTCTACCTCTAGCCATTGGGGATCTATAACTCTGTTTTGGACAATTCCTCCTAATATGTCCAGTCTCCCCACATCCATAACACTCTCTGGAGTCAAGCATAGGTCTCTCAGAGAAGTGTTGACCGGTCTGAGGTGGACCCCCAACTACAGTCTGTAGTGAAGATTGAATGGGTCGAACTGAGTAACCTCCGGAACCCTGTCCTCTAGAGTAAGAACCATTAAACTCACC</genome_strand>
        <mrna_strand>AAACACGAATAGGCATATCAAGTAATTCACAATGTAAAGTTAGACCATTAGCAAATGAGGAAGATACATAAGAAAATGTGGATCCAGGATCAAACAATACAGAAGCCATGCAATCACAAACCAAAAGATTACCTGTGATGACAACATCAGATTCCTCCGCTTCAGACCGCCCAGGGAAAGCGTAACAATGGGCCCTATCATTCTTATGTCTGTTGCCCCTACCATGTTGTGATGTAGTGGCTCCAGTTTGCCCATCACCTCGGCCGTTTTGGTGACCACCATTTCCTCGACCGCCACGTCCTCCAGAATAACGGACTCTGCCATGACCACCTCTACCTCTAACCTTTGGAGGTCTGTAACTCTGTTTTGGACAATATCTCTTAATATGTCCAATCTCCCCACACCCATAGCACTCTCTGGGTTCATGCATAAGTCTCTCAGAGAAGTGTTGACCGGTCGAAGGTGGACCCCCAACTACAGTCTGTAGTGAAGACTGAATTGGTCGGACTGAGTAACTTCCCGAACCCTGTCCTCTAGTGTAAGCACCATTAAACTCACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0002K14-GUpky/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E214046" ref_strand="+" ref_description="SGN-E214046 [cLEC-80-E17]">
      <seq>acgaataggcatatcaagaaattcacaatgtaaatttagaccattagcaaatgaggaagatacataagaaaacgtggatccaggatcaaacaatacggaagccatgcaatcacaaacaagaagattacctgtgatgacagcatcagatgcctccgctttagaccgcccagggaaagcgtaacaatgggccctatagtttgtttgtccattgcccctaccatgtcgtgatgtagtggccccagtttgtccattacctctgccgttttggtgaccaccattgcctcgaccaccacgtcctccaaaataacggcctctaccatgacaacctctacctctaactattgggggtctataacttggtccgggaaaatttctcctaatatgtccaatctccccacatccataacattctctagagtcactcataggcccctcggagaagtgttgaccggtctgaggtggacccccaactacagtttgtagtgaagactgaatgggtcgaactgagtaacctccagaaccttgtcctctagagtaagaacccttaaactcatctcccctttgaaacctcatcgatgtcgatgtcgtggtgaagtcgtctggtttcactccttccacttctatcaaaaagtctaccacttcttggaaggattttgccgttgccgctacctgtaagggcgaaatccgcaattctgacctcaaccccttcacaaccggcgaatccgctcttgagggactgaacagagttgagtggcatatctgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0002K14-GUpky/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0002K14.1" temp_strand="+" temp_description="C02SLe0002K14.1  AC215442.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0002K14 sequenced_by:kribb upload_account_name:korea">
        <position start="60279" stop="61642"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="60579" g_stop="61342" g_length="764"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="763" r_length="763" r_score="0.906"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0002K14.1" gen_strand="+" ref_id="SGN-E214046" ref_strand="+">
        <total_alignment_score>0.906</total_alignment_score>
        <cumulative_length_of_scored_exons>764</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0002K14.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E214046" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="60579" e_stop="61342"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACGAATAGGCATATCAAGTAATTCACAATGTAAATTTAGACCATTAGCAAATGAGGAAGATACATAAGAAAATGTGGATCCAGGATCAAACAATACATAAGCCATGCAATCACAAACCAGAAGATTACCTGTGATGACAGCATCAGATGCCTCCGCTTCAGACCGCCCAGGGAAAGCGTAACAATGGGCCCTATCGTTTGTCTGTCCATTGCCCCTACCATGTTGTGATGTAGTGGCTCTAGTTTGCCCACCACCTCGGCCATTTTGGTGACCACCATTACCTCGACCACCACGTCCTCCAGAATAACGGCCTCTACCATGACCACCTCTACCTCTAGCCATTGGGGATCTATAACTCTGTTTTGGACAATTCCTCCTAATATGTCCAGTCTCCCCACATCCATAACACTCTCTGGAGTCAAGCATAGGTCTCTCAGAGAAGTGTTGACCGGTCTGAGGTGGACCCCCAACTACAGTCTGTAGTGAAGATTGAATGGGTCGAACTGAGTAACCTCCGGAACCCTGTCCTCTAGAGTAAGAACCATTAAACTCACCTCCCTTTCGAAACCTCTTTGATGTCGATGCCATGGTGAATTCATCTGGCTTCACTCCTTCCACCTCTACCACGAAATCTACCACTTCTTGGAAGGATTTTGCCATAGCCGCTACCTGTAAGGCTGAAATCCACAACTCTGACCTCAACCCCTTCACAGAATGACGAATCCGCTCTTG-TGGACTGAAACAAAGTTGAGTGGCATATCTGG</genome_strand>
        <mrna_strand>ACGAATAGGCATATCAAGAAATTCACAATGTAAATTTAGACCATTAGCAAATGAGGAAGATACATAAGAAAACGTGGATCCAGGATCAAACAATACGGAAGCCATGCAATCACAAACAAGAAGATTACCTGTGATGACAGCATCAGATGCCTCCGCTTTAGACCGCCCAGGGAAAGCGTAACAATGGGCCCTATAGTTTGTTTGTCCATTGCCCCTACCATGTCGTGATGTAGTGGCCCCAGTTTGTCCATTACCTCTGCCGTTTTGGTGACCACCATTGCCTCGACCACCACGTCCTCCAAAATAACGGCCTCTACCATGACAACCTCTACCTCTAACTATTGGGGGTCTATAACTTGGTCCGGGAAAATTTCTCCTAATATGTCCAATCTCCCCACATCCATAACATTCTCTAGAGTCACTCATAGGCCCCTCGGAGAAGTGTTGACCGGTCTGAGGTGGACCCCCAACTACAGTTTGTAGTGAAGACTGAATGGGTCGAACTGAGTAACCTCCAGAACCTTGTCCTCTAGAGTAAGAACCCTTAAACTCATCTCCCCTTTGAAACCTCATCGATGTCGATGTCGTGGTGAAGTCGTCTGGTTTCACTCCTTCCACTTCTATCAAAAAGTCTACCACTTCTTGGAAGGATTTTGCCGTTGCCGCTACCTGTAAGGGCGAAATCCGCAATTCTGACCTCAACCCCTTCACA-ACCGGCGAATCCGCTCTTGAGGGACTG-AACAGAGTTGAGTGGCATATCTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0002K14-GUpky/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E356912" ref_strand="+" ref_description="SGN-E356912 [cTOS-22-F17]">
      <seq>caggatcaaacaatacggaagccatgcaatcacaaactagaagattacctgtgatgacagcatcagatgcctccgcttcagaccgcccagggaaagcgtaacaatgggccctatcgtttgtctgcccattgcccctaccatgttgtgatgtagtggccccagtttgcccattacctctgccgttttggtgaccaccattacctcgaccaccacgtcctccagaataacggcctctaccatgaccacctctacctctagctattgggggtctataacttggtccaggacaatttatcctaatatgtccaatctccccacatccataacattctctggagtcactcataggccccttggagaagtgttgaccggtctgaggtggacccccaactacagtctgtagtgaagactgaatgggtcgagccgagtaacctccggaaccttgtcctctagagtaagaacccttaaactcacctccctttcgaaacctctttgatgttgatgtcgtggtgaagtcgtctggcttcactccttccacttctatcacaaagtctaccacttcttggaaggattttgccgttgccgctacctgtaaggccgaaatccgcaattctgacctcaaccccttcacaaaccggagaatccgctcttgaggactgaaacagagttgagtggcatatccggatagtgcacggaacttagcctcataagcattaaccgacatcctaccttgctctaggctcaggaactcatctcttttcctatccctcaaagtccgggggatatactt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0002K14-GUpky/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0002K14.1" temp_strand="+" temp_description="C02SLe0002K14.1  AC215442.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0002K14 sequenced_by:kribb upload_account_name:korea">
        <position start="60359" stop="61747"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="60659" g_stop="61447" g_length="789"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="790" r_length="790" r_score="0.923"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0002K14.1" gen_strand="+" ref_id="SGN-E356912" ref_strand="+">
        <total_alignment_score>0.923</total_alignment_score>
        <cumulative_length_of_scored_exons>789</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0002K14.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E356912" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="60659" e_stop="61447"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGGATCAAACAATACATAAGCCATGCAATCACAAACCAGAAGATTACCTGTGATGACAGCATCAGATGCCTCCGCTTCAGACCGCCCAGGGAAAGCGTAACAATGGGCCCTATCGTTTGTCTGTCCATTGCCCCTACCATGTTGTGATGTAGTGGCTCTAGTTTGCCCACCACCTCGGCCATTTTGGTGACCACCATTACCTCGACCACCACGTCCTCCAGAATAACGGCCTCTACCATGACCACCTCTACCTCTAGCCATTGGGGATCTATAACTCTGTTTTGGACAATTCCTCCTAATATGTCCAGTCTCCCCACATCCATAACACTCTCTGGAGTCAAGCATAGGTCTCTCAGAGAAGTGTTGACCGGTCTGAGGTGGACCCCCAACTACAGTCTGTAGTGAAGATTGAATGGGTCGAACTGAGTAACCTCCGGAACCCTGTCCTCTAGAGTAAGAACCATTAAACTCACCTCCCTTTCGAAACCTCTTTGATGTCGATGCCATGGTGAATTCATCTGGCTTCACTCCTTCCACCTCTACCACGAAATCTACCACTTCTTGGAAGGATTTTGCCATAGCCGCTACCTGTAAGGCTGAAATCCACAACTCTGACCTCAACCCCTTCACAGAATGACGAATCCGCTCTTGTGGACTGAAACAAAGTTGAGTGGCATATCTGGATAGTGCACGAAACTTAGCCTCATATGCATTGACCGACATCCTACCTT-CTCTAGGCTCAAGAACTCATCCCTTTTCCTATCCCTCAAAGTCCGGGGGATATACTT</genome_strand>
        <mrna_strand>CAGGATCAAACAATACGGAAGCCATGCAATCACAAACTAGAAGATTACCTGTGATGACAGCATCAGATGCCTCCGCTTCAGACCGCCCAGGGAAAGCGTAACAATGGGCCCTATCGTTTGTCTGCCCATTGCCCCTACCATGTTGTGATGTAGTGGCCCCAGTTTGCCCATTACCTCTGCCGTTTTGGTGACCACCATTACCTCGACCACCACGTCCTCCAGAATAACGGCCTCTACCATGACCACCTCTACCTCTAGCTATTGGGGGTCTATAACTTGGTCCAGGACAATTTATCCTAATATGTCCAATCTCCCCACATCCATAACATTCTCTGGAGTCACTCATAGGCCCCTTGGAGAAGTGTTGACCGGTCTGAGGTGGACCCCCAACTACAGTCTGTAGTGAAGACTGAATGGGTCGAGCCGAGTAACCTCCGGAACCTTGTCCTCTAGAGTAAGAACCCTTAAACTCACCTCCCTTTCGAAACCTCTTTGATGTTGATGTCGTGGTGAAGTCGTCTGGCTTCACTCCTTCCACTTCTATCACAAAGTCTACCACTTCTTGGAAGGATTTTGCCGTTGCCGCTACCTGTAAGGCCGAAATCCGCAATTCTGACCTCAACCCCTTCACAAACCGGAGAATCCGCTCTTGAGGACTGAAACAGAGTTGAGTGGCATATCCGGATAGTGCACGGAACTTAGCCTCATAAGCATTAACCGACATCCTACCTTGCTCTAGGCTCAGGAACTCATCTCTTTTCCTATCCCTCAAAGTCCGGGGGATATACTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0002K14-GUpky/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E353805" ref_strand="+" ref_description="SGN-E353805 [cTOS-10-C24]">
      <seq>ggatcaacaatacggaagccatgcaatcacaaactagaagattacctgtgatgacagcatcagatgcctccgcttcagaccgcccagggaaagcgtaacaatgggccctatcgtttgtctgcccattgcccctaccatgttgtgatgtagtggccccagtttgcccattacctctgccgttttggtgaccaccattacctcgaccaccacgtcctccagaataacggcctctaccatgaccacctctacctctagctattgggggtctataacttggtccaggacaatttatcctaatatgtccaatctccccacatccataacattctctggagtcactcataggccccttggagaagtgttgaccggtctgaggtggacccccaactacagtctgtagtgaagactgaatgggtcgagccgagtaacctccggaaccttgtcctctaaagtaagaacccttaaactcacctccctttcgaaacctctttgatgttgatgtcgtggtgaagtcgtctggcttcactccttcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0002K14-GUpky/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0002K14.1" temp_strand="+" temp_description="C02SLe0002K14.1  AC215442.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0002K14 sequenced_by:kribb upload_account_name:korea">
        <position start="60361" stop="61494"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="60661" g_stop="61194" g_length="534"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="533" r_length="533" r_score="0.927"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0002K14.1" gen_strand="+" ref_id="SGN-E353805" ref_strand="+">
        <total_alignment_score>0.927</total_alignment_score>
        <cumulative_length_of_scored_exons>534</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0002K14.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E353805" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="60661" e_stop="61194"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGATCAAACAATACATAAGCCATGCAATCACAAACCAGAAGATTACCTGTGATGACAGCATCAGATGCCTCCGCTTCAGACCGCCCAGGGAAAGCGTAACAATGGGCCCTATCGTTTGTCTGTCCATTGCCCCTACCATGTTGTGATGTAGTGGCTCTAGTTTGCCCACCACCTCGGCCATTTTGGTGACCACCATTACCTCGACCACCACGTCCTCCAGAATAACGGCCTCTACCATGACCACCTCTACCTCTAGCCATTGGGGATCTATAACTCTGTTTTGGACAATTCCTCCTAATATGTCCAGTCTCCCCACATCCATAACACTCTCTGGAGTCAAGCATAGGTCTCTCAGAGAAGTGTTGACCGGTCTGAGGTGGACCCCCAACTACAGTCTGTAGTGAAGATTGAATGGGTCGAACTGAGTAACCTCCGGAACCCTGTCCTCTAGAGTAAGAACCATTAAACTCACCTCCCTTTCGAAACCTCTTTGATGTCGATGCCATGGTGAATTCATCTGGCTTCACTCCTTCC</genome_strand>
        <mrna_strand>GGATC-AACAATACGGAAGCCATGCAATCACAAACTAGAAGATTACCTGTGATGACAGCATCAGATGCCTCCGCTTCAGACCGCCCAGGGAAAGCGTAACAATGGGCCCTATCGTTTGTCTGCCCATTGCCCCTACCATGTTGTGATGTAGTGGCCCCAGTTTGCCCATTACCTCTGCCGTTTTGGTGACCACCATTACCTCGACCACCACGTCCTCCAGAATAACGGCCTCTACCATGACCACCTCTACCTCTAGCTATTGGGGGTCTATAACTTGGTCCAGGACAATTTATCCTAATATGTCCAATCTCCCCACATCCATAACATTCTCTGGAGTCACTCATAGGCCCCTTGGAGAAGTGTTGACCGGTCTGAGGTGGACCCCCAACTACAGTCTGTAGTGAAGACTGAATGGGTCGAGCCGAGTAACCTCCGGAACCTTGTCCTCTAAAGTAAGAACCCTTAAACTCACCTCCCTTTCGAAACCTCTTTGATGTTGATGTCGTGGTGAAGTCGTCTGGCTTCACTCCTTCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0002K14-GUpky/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E356209" ref_strand="+" ref_description="SGN-E356209 [cTOS-20-H15]">
      <seq>ttcagaccgcccagggaaagcgtaacaatgggccctatcgttcgtctgtccgttgcccctaccatgttgtgatgtagtggccccagtttgcccattacctctgccattttggtgaccaccattacctcgaccaccacgtcctccagaataacggcctctaccatgaccacctctacctctagctattgggggtctataactttgtctgggacaatttttcctaatatgtccaatctccccacatccataacattctctggagtcaagcataggcccctcggagaagtgttaaccggtctgaggtggtctcccaactacagtctgtagtgaagactgaattggtcggactgagtaacttcccgaaccctgtcctctagtgtaagaaccattaaactcacctcccttccgaaacctttttgatgtcgatgttgtggtgaagtcgtctggcttcactccttccacttctatcacaaagtctaccacttcttggaaggattttgccgttgccgctatctgtaaggacgaaatccgcaattctgacctcaaccccttcacaaaccggcgaatccgctcttgaggactgaaacagagttgagtggcatatctggatagtgcacgaaacttagcctcataagcattaaccgacatcctaccttgctctaggctcaagaactcatcccttttcctatccctcaaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0002K14-GUpky/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0002K14.1" temp_strand="+" temp_description="C02SLe0002K14.1  AC215442.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0002K14 sequenced_by:kribb upload_account_name:korea">
        <position start="60435" stop="61731"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="60735" g_stop="61431" g_length="697"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="698" r_length="698" r_score="0.920"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0002K14.1" gen_strand="+" ref_id="SGN-E356209" ref_strand="+">
        <total_alignment_score>0.920</total_alignment_score>
        <cumulative_length_of_scored_exons>697</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0002K14.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E356209" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="60735" e_stop="61431"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCAGACCGCCCAGGGAAAGCGTAACAATGGGCCCTATCGTTTGTCTGTCCATTGCCCCTACCATGTTGTGATGTAGTGGCTCTAGTTTGCCCACCACCTCGGCCATTTTGGTGACCACCATTACCTCGACCACCACGTCCTCCAGAATAACGGCCTCTACCATGACCACCTCTACCTCTAGCCATTGGGGATCTATAACTCTGTTTTGGACAATTCCTCCTAATATGTCCAGTCTCCCCACATCCATAACACTCTCTGGAGTCAAGCATAGGTCTCTCAGAGAAGTGTTGACCGGTCTGAGGTGGACCCCCAACTACAGTCTGTAGTGAAGATTGAATGGGTCGAACTGAGTAACCTCCGGAACCCTGTCCTCTAGAGTAAGAACCATTAAACTCACCTCCCTTTCGAAACCTCTTTGATGTCGATGCCATGGTGAATTCATCTGGCTTCACTCCTTCCACCTCTACCACGAAATCTACCACTTCTTGGAAGGATTTTGCCATAGCCGCTACCTGTAAGGCTGAAATCCACAACTCTGACCTCAACCCCTTCACAGAATGACGAATCCGCTCTTGTGGACTGAAACAAAGTTGAGTGGCATATCTGGATAGTGCACGAAACTTAGCCTCATATGCATTGACCGACATCCTACCTT-CTCTAGGCTCAAGAACTCATCCCTTTTCCTATCCCTCAAAG</genome_strand>
        <mrna_strand>TTCAGACCGCCCAGGGAAAGCGTAACAATGGGCCCTATCGTTCGTCTGTCCGTTGCCCCTACCATGTTGTGATGTAGTGGCCCCAGTTTGCCCATTACCTCTGCCATTTTGGTGACCACCATTACCTCGACCACCACGTCCTCCAGAATAACGGCCTCTACCATGACCACCTCTACCTCTAGCTATTGGGGGTCTATAACTTTGTCTGGGACAATTTTTCCTAATATGTCCAATCTCCCCACATCCATAACATTCTCTGGAGTCAAGCATAGGCCCCTCGGAGAAGTGTTAACCGGTCTGAGGTGGTCTCCCAACTACAGTCTGTAGTGAAGACTGAATTGGTCGGACTGAGTAACTTCCCGAACCCTGTCCTCTAGTGTAAGAACCATTAAACTCACCTCCCTTCCGAAACCTTTTTGATGTCGATGTTGTGGTGAAGTCGTCTGGCTTCACTCCTTCCACTTCTATCACAAAGTCTACCACTTCTTGGAAGGATTTTGCCGTTGCCGCTATCTGTAAGGACGAAATCCGCAATTCTGACCTCAACCCCTTCACAAACCGGCGAATCCGCTCTTGAGGACTGAAACAGAGTTGAGTGGCATATCTGGATAGTGCACGAAACTTAGCCTCATAAGCATTAACCGACATCCTACCTTGCTCTAGGCTCAAGAACTCATCCCTTTTCCTATCCCTCAAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0002K14-GUpky/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E356614" ref_strand="+" ref_description="SGN-E356614 [cTOS-21-N3]">
      <seq>gcgaatccgctcttgaggactgaaacagagttgagtggcatatctggatagtgcacgaaacttagcctcataagcattaactgacaccctaccttgctctaggctcaagaactcatcccttttcttatccctcaaagtccgggggatatacttctccataaacaaactatagaatgaggcccaagtcataggtgatgcctctattggttgacactcgatatgtgaccgccaccacatttgggcgttcccttgaaactgataagtcacaaactccacaccaaaccgttctactatacccatcttgtgtagtagctcgtgacagtcaaccagaaaatcataagcatcctccgattcagcacccttgaagaccggaggtttcaatttcaagaacttactgaaaagttcatgctgatcatttgtcattatagggacagtagtcaaacgtggaaatgtgcctatgtccaatggaacatccatgcggggagccatagtagccgcatgttgtacttctgaaaccggaggtgttggcgcagaaaacactggaggtgcttgaccttgatcagataacccgctaagataagccagaacctgattgatcatctctggggtaggttggggtggcatttcctcattttgcacttgntcagtttccccatccctccctttctctattacttcctcagtcagtggaagagtcactgccctagtatcagatgggct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0002K14-GUpky/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0002K14.1" temp_strand="+" temp_description="C02SLe0002K14.1  AC215442.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0002K14 sequenced_by:kribb upload_account_name:korea">
        <position start="60997" stop="62314"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="61296" g_stop="62014" g_length="719"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="720" r_length="720" r_score="0.901"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0002K14.1" gen_strand="+" ref_id="SGN-E356614" ref_strand="+">
        <total_alignment_score>0.901</total_alignment_score>
        <cumulative_length_of_scored_exons>719</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0002K14.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E356614" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="61296" e_stop="62014"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACGAATCCGCTCTTGTGGACTGAAACAAAGTTGAGTGGCATATCTGGATAGTGCACGAAACTTAGCCTCATATGCATTGACCGACATCCTACCTT-CTCTAGGCTCAAGAACTCATCCCTTTTCCTATCCCTCAAAGTCCGGGGGATATACTTCTCCATAAACAAGCTAGAGAATGAGGCCCAAGTCATAGGTGGTGCCTTTGTTGGTTGACACTCAACATGTGAATGCCACCACATTTTGGCGTTCCCTTGAAACTGGTAAGTCACAAACTCAACACCAAACCGTTCTACTATACCCATCTTGTGTAATAGCTCATGACAGCCAACCAGAAGATCGTAGGCATCCTCAGATTTAGCACCCTTGAAGACCGGAGGTTTCAATTTCAAGAACTTACTAAAAATTTCATGCTGATCATTTATCATTATAGGCCCTGTAGTCAGACGAGGAAATGTGCCTATTTCCAGTGAGGCATCCATGCGGGGAGCCACAGTAGCCGCATATTGTACCTCCGGAACCTGAGGTGCTGGTGCAGAAAACACTGGAGGTGTCTGGCCTTGATCAGATAACCCGCTAAGATAAGCAAGAACCTGATTGATCATCTCTGGGGTAGGTTGGGGTGGCAATTCCTCATTCTGCACTTGTTCATTCTCCTTAT-CCTCCCCTTCTCTTACTACTTCCTCAGTCGGTGGAGGAGTCACCGCCCTAGTACCAGATGGGCT</genome_strand>
        <mrna_strand>GCGAATCCGCTCTTGAGGACTGAAACAGAGTTGAGTGGCATATCTGGATAGTGCACGAAACTTAGCCTCATAAGCATTAACTGACACCCTACCTTGCTCTAGGCTCAAGAACTCATCCCTTTTCTTATCCCTCAAAGTCCGGGGGATATACTTCTCCATAAACAAACTATAGAATGAGGCCCAAGTCATAGGTGATGCCTCTATTGGTTGACACTCGATATGTGACCGCCACCACATTTGGGCGTTCCCTTGAAACTGATAAGTCACAAACTCCACACCAAACCGTTCTACTATACCCATCTTGTGTAGTAGCTCGTGACAGTCAACCAGAAAATCATAAGCATCCTCCGATTCAGCACCCTTGAAGACCGGAGGTTTCAATTTCAAGAACTTACTGAAAAGTTCATGCTGATCATTTGTCATTATAGGGACAGTAGTCAAACGTGGAAATGTGCCTATGTCCAATGGAACATCCATGCGGGGAGCCATAGTAGCCGCATGTTGTACTTCTGAAACCGGAGGTGTTGGCGCAGAAAACACTGGAGGTGCTTGACCTTGATCAGATAACCCGCTAAGATAAGCCAGAACCTGATTGATCATCTCTGGGGTAGGTTGGGGTGGCATTTCCTCATTTTGCACTTGNTCAGTTTCCCCATCCCTCCCTTTCTC-TATTACTTCCTCAGTCAGTGGAAGAGTCACTGCCCTAGTATCAGATGGGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0002K14-GUpky/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E352401" ref_strand="+" ref_description="SGN-E352401 [cTOS-9-N1]">
      <seq>aatccgctcttgaggactgaaacagagttgagtggcatatctggatagtgcacgaaacttagcctcataagcattaactgacaccctaccttgctctaggctcaagaactcatcccttttcttatccctcaaagtccgggggatatacttctccataaacaaactatagaatgaggcccaagtcataggtgatgcctctattggttgacactcgatatgtgaccgccaccacatttgggcgttcccttgaaactgataagtcacaaactccacaccaaaccgttctactatacccatcttgtgtagtagctcgtgacagtcaaccagaaaatcataagcatcctccgattcagcacccttgaagaccggaggtttcaatttcaagaacttactgaaaagttcatgctgatcatttgtcattatagggacagtagtcaaacgtggaaatgtgcctatgtccaatggaacatccatgcggggagccatagtagccgcatgttgtacttctgaaaccggaggtgttggcgcagaaaacactggaggtgcttgaccttgatcagataacccgctaagataagccagaacctgattgatcatctctggggtaggttggggtgccatttccctcatttgcacttgttcagtttccccatcctccccttct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0002K14-GUpky/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0002K14.1" temp_strand="+" temp_description="C02SLe0002K14.1  AC215442.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0002K14 sequenced_by:kribb upload_account_name:korea">
        <position start="60999" stop="62261"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="61299" g_stop="61961" g_length="663"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="664" r_length="664" r_score="0.905"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0002K14.1" gen_strand="+" ref_id="SGN-E352401" ref_strand="+">
        <total_alignment_score>0.905</total_alignment_score>
        <cumulative_length_of_scored_exons>663</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0002K14.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E352401" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="61299" e_stop="61961"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATCCGCTCTTGTGGACTGAAACAAAGTTGAGTGGCATATCTGGATAGTGCACGAAACTTAGCCTCATATGCATTGACCGACATCCTACCTT-CTCTAGGCTCAAGAACTCATCCCTTTTCCTATCCCTCAAAGTCCGGGGGATATACTTCTCCATAAACAAGCTAGAGAATGAGGCCCAAGTCATAGGTGGTGCCTTTGTTGGTTGACACTCAACATGTGAATGCCACCACATTTTGGCGTTCCCTTGAAACTGGTAAGTCACAAACTCAACACCAAACCGTTCTACTATACCCATCTTGTGTAATAGCTCATGACAGCCAACCAGAAGATCGTAGGCATCCTCAGATTTAGCACCCTTGAAGACCGGAGGTTTCAATTTCAAGAACTTACTAAAAATTTCATGCTGATCATTTATCATTATAGGCCCTGTAGTCAGACGAGGAAATGTGCCTATTTCCAGTGAGGCATCCATGCGGGGAGCCACAGTAGCCGCATATTGTACCTCCGGAACCTGAGGTGCTGGTGCAGAAAACACTGGAGGTGTCTGGCCTTGATCAGATAACCCGCTAAGATAAGCAAGAACCTGATTGATCATCTCTGGGGTAGGTTGGGGTGGCAATT-CCTCATTCTGCACTTGTTCATTCTCCTTATCCTCCCCTTCT</genome_strand>
        <mrna_strand>AATCCGCTCTTGAGGACTGAAACAGAGTTGAGTGGCATATCTGGATAGTGCACGAAACTTAGCCTCATAAGCATTAACTGACACCCTACCTTGCTCTAGGCTCAAGAACTCATCCCTTTTCTTATCCCTCAAAGTCCGGGGGATATACTTCTCCATAAACAAACTATAGAATGAGGCCCAAGTCATAGGTGATGCCTCTATTGGTTGACACTCGATATGTGACCGCCACCACATTTGGGCGTTCCCTTGAAACTGATAAGTCACAAACTCCACACCAAACCGTTCTACTATACCCATCTTGTGTAGTAGCTCGTGACAGTCAACCAGAAAATCATAAGCATCCTCCGATTCAGCACCCTTGAAGACCGGAGGTTTCAATTTCAAGAACTTACTGAAAAGTTCATGCTGATCATTTGTCATTATAGGGACAGTAGTCAAACGTGGAAATGTGCCTATGTCCAATGGAACATCCATGCGGGGAGCCATAGTAGCCGCATGTTGTACTTCTGAAACCGGAGGTGTTGGCGCAGAAAACACTGGAGGTGCTTGACCTTGATCAGATAACCCGCTAAGATAAGCCAGAACCTGATTGATCATCTCTGGGGTAGGTTGGGGTGCCATTTCCCTCATT-TGCACTTGTTCAGTTTCCCCATCCTCCCCTTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0002K14-GUpky/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E329287" ref_strand="+" ref_description="SGN-E329287 [cTOD-2-K13]">
      <seq>acctagcccatctggtactaaggcggtgacacctccaccaactgaggaagtggtaagagagggtgaggatggggagaatgaacaagtgcagaatgaggaattgccaccccaacctacccaagagatgatcaatcaggttcttgcttaccttagcgggttatctgatcaaggccaagcacctccagtgttttctgcactagcacctcaggctccggaggtacaacatgcgcctactgtgactccccgcatcgatacctcattggaaataggaacgtttccccgtctgactacagggcctataatgacaaatgatcagcatgaactttttagtaagttcttgaaattgaaacctcaagtctacaagggtgttgaatctgaggatgcctacgattttctggttgactgtcatgagctactacacaagatgggtatagtagaacggtttggtgttgagtttgtgacttatcagtttcaagggaacgccaaaatgtggtggcggtcacatgttgagtgtcaaccaacagaggcaccacgtatgacttgggcatcattct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0002K14-GUpky/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0002K14.1" temp_strand="-" temp_description="C02SLe0002K14.1  AC215442.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0002K14 sequenced_by:kribb upload_account_name:korea">
        <position start="62318" stop="61165"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62018" g_stop="61465" g_length="554"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="554" r_length="554" r_score="0.930"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0002K14.1" gen_strand="-" ref_id="SGN-E329287" ref_strand="+">
        <total_alignment_score>0.930</total_alignment_score>
        <cumulative_length_of_scored_exons>554</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0002K14.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E329287" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62018" e_stop="61465"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACCTAGCCCATCTGGTACTAGGGCGGTGACTCCTCCACCGACTGAGGAAGTAGTAAGAGAAGGGGAGGATAAGGAGAATGAACAAGTGCAGAATGAGGAATTGCCACCCCAACCTACCCCAGAGATGATCAATCAGGTTCTTGCTTATCTTAGCGGGTTATCTGATCAAGGCCAGACACCTCCAGTGTTTTCTGCACCAGCACCTCAGGTTCCGGAGGTACAATATGCGGCTACTGTGGCTCCCCGCATGGATGCCTCACTGGAAATAGGCACATTTCCTCGTCTGACTACAGGGCCTATAATGATAAATGATCAGCATGAAATTTTTAGTAAGTTCTTGAAATTGAAACCTCCGGTCTTCAAGGGTGCTAAATCTGAGGATGCCTACGATCTTCTGGTTGGCTGTCATGAGCTATTACACAAGATGGGTATAGTAGAACGGTTTGGTGTTGAGTTTGTGACTTACCAGTTTCAAGGGAACGCCAAAATGTGGTGGCATTCACATGTTGAGTGTCAACCAACAAAGGCACCACCTATGACTTGGGCCTCATTCT</genome_strand>
        <mrna_strand>ACCTAGCCCATCTGGTACTAAGGCGGTGACACCTCCACCAACTGAGGAAGTGGTAAGAGAGGGTGAGGATGGGGAGAATGAACAAGTGCAGAATGAGGAATTGCCACCCCAACCTACCCAAGAGATGATCAATCAGGTTCTTGCTTACCTTAGCGGGTTATCTGATCAAGGCCAAGCACCTCCAGTGTTTTCTGCACTAGCACCTCAGGCTCCGGAGGTACAACATGCGCCTACTGTGACTCCCCGCATCGATACCTCATTGGAAATAGGAACGTTTCCCCGTCTGACTACAGGGCCTATAATGACAAATGATCAGCATGAACTTTTTAGTAAGTTCTTGAAATTGAAACCTCAAGTCTACAAGGGTGTTGAATCTGAGGATGCCTACGATTTTCTGGTTGACTGTCATGAGCTACTACACAAGATGGGTATAGTAGAACGGTTTGGTGTTGAGTTTGTGACTTATCAGTTTCAAGGGAACGCCAAAATGTGGTGGCGGTCACATGTTGAGTGTCAACCAACAGAGGCACCACGTATGACTTGGGCATCATTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0002K14-GUpky/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E246710" ref_strand="+" ref_description="SGN-E246710 [cLEF-45-O22]">
      <seq>cacaaaccgacatatagatttaggggatcggagtgtcacgtaccgacacaagaggattaatgaatattgagggagcggagtgtcacgtaccgacacaagagaaataaagataatgaatcttgaaagatgttaatatactcaatctaatgaacatgattcccaaatgagtatggtattgaggcttgagtcctcatgtgtgaacttgacggtaattgttaatgatatagtatttgttgttgctacatgttgagtatcatagttgattttatgatattacttggtatatatattgatttctattttgagttggccgatgatatctactcagtacccgtgttttgtactgacccctacttttatgttctcttcttgtttatttgtggagtgcagcaaacgtgccatcgtgttcaactcaacagtaattcaagccagtcttactacatcggaaattcagggtgagctaatgcttctagcttggact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0002K14-GUpky/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0002K14.1" temp_strand="-" temp_description="C02SLe0002K14.1  AC215442.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0002K14 sequenced_by:kribb upload_account_name:korea">
        <position start="63466" stop="62389"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="63166" g_stop="62689" g_length="478"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="481" r_length="481" r_score="0.937"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0002K14.1" gen_strand="-" ref_id="SGN-E246710" ref_strand="+">
        <total_alignment_score>0.937</total_alignment_score>
        <cumulative_length_of_scored_exons>478</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0002K14.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E246710" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="63166" e_stop="62689"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACGAACCGACACGTAGATTTAGGGGAGCGGAGTGTCACGTACCGACACAAGAGGATTAATGAATA-TGAGGGAGCGGAGTGTCACGTACCGACACAAGAGAAATAAAGATAATGAATCTTGAAAGATGGTAATATACTCAATCTAATTAACATAATTCCCAAATGAGTATGGTATTGAGGCTTGAGTCCTCATGTGTGAACTTGACGATAATTGTTAATGATATAGTACTTGCTGTTGCTACATGTTGAGTATCATAGTTGATTTTATGATATTACTTGG--TATATATTGATTTCTATTTTGAGTTGGCCGATGATATCTACTCAGTACCCGTGTTTTGTACTGACCCCTACTTTTATGTTTTCTTCTTGTTTATTTGTGGAGCGCAGCAAACGTGCCGTCATCTTCGACTCAACAGTAACTCTAGCCAGTCTTCATTACTTCGGATA-TCAGGGTGAGCTAATGCTTCTAGCTTGGACT</genome_strand>
        <mrna_strand>CACAAACCGACATATAGATTTAGGGGATCGGAGTGTCACGTACCGACACAAGAGGATTAATGAATATTGAGGGAGCGGAGTGTCACGTACCGACACAAGAGAAATAAAGATAATGAATCTTGAAAGATGTTAATATACTCAATCTAATGAACATGATTCCCAAATGAGTATGGTATTGAGGCTTGAGTCCTCATGTGTGAACTTGACGGTAATTGTTAATGATATAGTATTTGTTGTTGCTACATGTTGAGTATCATAGTTGATTTTATGATATTACTTGGTATATATATTGATTTCTATTTTGAGTTGGCCGATGATATCTACTCAGTACCCGTGTTTTGTACTGACCCCTACTTTTATGTTCTCTTCTTGTTTATTTGTGGAGTGCAGCAAACGTGCCATCGTGTTCAACTCAACAGTAATTCAAGCCAGTCTT-ACTACATCGGAAATTCAGGGTGAGCTAATGCTTCTAGCTTGGACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0002K14-GUpky/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E715123" ref_strand="+" ref_description="SGN-E715123 [FB13BF07]">
      <seq>ctgatattggtatgtggtcatcattgccaatcttgccatctccttggattatgggcccaagatacttgaagcttcctctcttagtctcaattggacaaacaacagatgtacaaaagggagcttctttgtttaatcgagcttgcattggatgtcattatgaaggtggaaatataatccagcctggtgcgacactcttcttgaaggatctacaaagaaatggagttgacacggaagaggaaatctaccgcgtcacttacaatggcaaagggagaatgccagggtttggtcagaattgtacaccaaggggtcaatgcacttttggtcctcgattacaagacgatgaaattaaactcttagctgagtttgtgaagtctcaagctgatcaagattggcctaaaatcgaaaacagtggagattgaaaataactattagtacttcacaattgttcaaaatgtgcatatcatgtttctcagttgctttgtcttttcatctctctcgtcccattcggatgtttactaaaggcgattcagagagaaatagtcagtcatttcactagagagttacctgttgatgacatgaagggtagcttcacttgttctgtgtaaagttgaccttatttacttcccaacaatagtttctattagttttagattataacacatgctggacctgttagagcacatgctcacatgcatctgttattgtaaactttttttaatataaaaactatagtttgacttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0002K14-GUpky/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0002K14.1" temp_strand="+" temp_description="C02SLe0002K14.1  AC215442.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0002K14 sequenced_by:kribb upload_account_name:korea">
        <position start="127277" stop="131407"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="127577" g_stop="127660" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="84" r_length="84" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="127661" i_stop="129522" i_length="1862">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="129523" g_stop="129620" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="85" r_stop="182" r_length="98" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="129621" i_stop="129703" i_length="83">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.789" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="129704" g_stop="129735" g_length="32"/>
          <reference_exon_boundary r_type="cDNA" r_start="183" r_stop="214" r_length="32" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="129736" i_stop="130501" i_length="766">
            <donor d_prob="0.998" d_score="0.00"/>
            <acceptor a_prob="0.696" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="130502" g_stop="130565" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="215" r_stop="278" r_length="64" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="130566" i_stop="130644" i_length="79">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="130645" g_stop="131107" g_length="463"/>
          <reference_exon_boundary r_type="cDNA" r_start="279" r_stop="741" r_length="463" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0002K14.1" gen_strand="+" ref_id="SGN-E715123" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>741</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0002K14.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E715123" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="127577" e_stop="127660"/>
          <exon e_start="129523" e_stop="129620"/>
          <exon e_start="129704" e_stop="129735"/>
          <exon e_start="130502" e_stop="130565"/>
          <exon e_start="130645" e_stop="131107"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGATATTGGTATGTGGTCATCATTGCCAATCTTGCCATCTCCTTGGATTATGGGCCCAAGATACTTGAAGCTTCCTCTCTTAGGTATGATTTGTGCCTCGATCTTCACTTTTACCTCCAGGTCATGACTGAACTTGTCACTCCAGCTAGTCTGTTTTAGTCTTGCTTAACCTAAAAATCTTTAAACTTTCGGGCATTTCTCCAAACTTTCAGCTTATCGTTAACTCAACCACGTGTCTCGTCAATTAATATTATGTCATCTGCAAATAACGTGCATCATGGCTCCTCCTCTTAAATATGTCGTGTCAATTCGTCCATTACTTAGCTAAACAGGAACAAGCTAAGGGTTGATCCTGGTGCAACCCCACTACATTCGCTAAGTGTTCGGAGTCACCTTCCACCGTCCTAACCCTGGTCTCAAATCCATCATACATGTCCTTAATTGCCCTTTTTACGTAGTTTATATATGTATGATCCTATGCAGTTACGACTATGTCTGAATGTCTAGTAGGTTTAAAGGGAACTGAGTGATAAAGTACCATTACACATGATATACCAATTTGGTAAAGGTGTTTGAAGGCAAATGATTAATCTGGAAAGAAATAATTAAGGATAAACTTGAAGGGATAGCAGATCAGCCAATTGTTGCTAGAGTTGTCAAAAAGAGGTGTAATCTGTATAATTGGTTTATTCACGTTCTAAGGAGGCGGGGGATACTTTGGTCCTTGTCTTCTTCTCTTCATTTAATGAGACATTGTTGATGCCTCATCACATTCAGGTATAGCTGTCATCAGGGAATAGAGTAAATTGTGGAACAAATGGAAAATAATGTCAATACTTGCAGAGTTGCAGCAATACTATTACCTTATAAGGTAATTTAGGAAAAGAAAATCCTATATATAACAAGGAAGAAGAAATCATTGGTATGGAATGAACAAGTAATTCATAAACTATAAGCTAGTCGGTCATATCTCTCTACCTAGGGAAAATAGGGTGAAATACCAGCAGCTCTTAAGATTCTATAAGCACTTCACTGGTGCCTATGCTCTTAAATTTGTAATTTTACCTGCTATCTTAACCTGGAGATGAAGTTAGCTAATGTGTTGAATCCCTGAAGGACCATAAATCTTTGACAGTGATGCCAAGCCTTAAAACTACAACTCAGTTTCCATCCAACTTGTATCGACTTAGCTGATTGTGCGACTCGAAATCTGTTCGCCTCATGCCATTTCTGTAGCAAGTCCCTGAATAGTAACCACTGTGTGTTCAGTTTGATCATGCAACTTACTCACATAATCCTTCTTACGTAGGAGAGGTTTAATAAACTTATCATACTCGACAAGAATTTCTGGAAACTGAGCCTACTTGAGTTGCAGAAAATCCTTTAGCATTTACCATGCTTAAGGCATACATGACATATTCCCCACTAAGCAAGGTTTTTCTTGTCATCTGTGCACTTCTAGGTTATGATAAGATATGGATCATCAGGTACAATATTCCGCTGTTTACATGTGGGTAATCTGTGATGACAGACTACCTAATGAATAGAAGTATACATAAGAACTCTTTCTTAAACCAAATATAAAGCACTCCTAGAAGTATAAAAATGTTTGAGTTGCCAAATTTCTTCCTCTTATTTTATCTATCTATGATGTCATTTAGATGATATAACTGATCTTAAAACCTTCTCCATTGAGGAATGTTGGAAAATCCCTTAACCTGTACTCATCAAGTTTACGGCGGTTGCTATTAGTAATCTGTACATTCTGGAGGTCCCTTTTGAAGGTGACTTGGTTGTATTTCCTTATTTAACATTAGTGTACTGGAAACTTACCTGATTCCACATCTGATGTAAGTTGCAAGAAGAAATTCCTTGATATTAATTTATTTGCAGTTGATATTCTTAGTTTCTTCATCTCTTTATTTTATTGTACTTCTGTTTGCAGTCTCAATTGGACAAACAACAGATGTACAAAAGGGAGCTTCTTTGTTTAATCGAGCTTGCATTGGATGTCATTATGAAGGTGGAAATATAATCCAGCCTGTGAGTCTTACCTACCTCGTGATTCCGGTAGTCGTCGAAAATTTCCAGCTCACCTTAATTATCTTTCCTTTGTTATATGCTAGGGTGCGACACTCTTCTTGAAGGATCTACAAAGGTAAAAAATTAAAATCCACAGAGAAGATTTTTGTTTTGCTTGTAACTTCTTTGAGCATGTCACAAGTTCCTTAGAACTTTCTGTATCTGAATAGAAACCAGAAGTTCAAAGAAAAGGTACTTAAGTATTTACACTCCAGTAAAAGTATTACCAGACTTGAGACGACTTTTCAGATGTTTAGTTTAATTTCATGTACGGGGAATGGTGAGTAAGTTTAAAAGATATTCACAGCAACTTGAAGTTCAGAATAATAGTCCATATGCTAGCTCCTCTGTATTTAACTATCTATACCTTTTCCTGGCTCTAAATGAAAGGCTCTTTATTGACTTAAGATGTGTTCTCTCGTTCCCTTTCGCTTCTAATACTTAGCAGATCAAATTTTCTGAACATGAGAATTTCGTTTGGCGTATTCAATTCTTGTGAGGAAAACATATAGATAGAAGGTAAACTGAATATAATTTTTTTGAACAATAGATTGTGCAGCAAACTAATTTTCCTATAACATACGCGAGCTAAGAGTAAAGCTACAGTACATTGTTTCATTGAATTGTTAATTTTATTAATCAGCATTTACATAGTTTGACAAGACCAATTCTTAACAGACAAGAGGTTATTTCATCTCAACTTTTGAGAGATTTTTATTGTCTTGCTGTCTATCATATTCTATTCATTGTCATCTTTTCGTATGCATAGTTGAGATGCAATTTGTCATATCATTATGCAAAAACAACATGGGCAACTTTTAACTAGCTACTCTTCTGTATAGAAATGGAGTTGACACGGAAGAGGAAATCTACCGCGTCACTTACAATGGCAAAGGGAGAATGCCAGTAAGTTTATATTGTTCAGAACCATGGTTGTCTTTATGCTGTTGTGTCGTACACCTTATTGTGCTGTCTGGATTTGCAGGGGTTTGGTCAGAATTGTACACCAAGGGGTCAATGCACTTTTGGTCCTCGATTACAAGACGATGAAATTAAACTCTTAGCTGAGTTTGTGAAGTCTCAAGCTGATCAAGATTGGCCTAAAATCGAAAACAGTGGAGATTGAAAATAACTATTAGTACTTCACAATTGTTCAAAATGTGCATATCATGTTTCTCAGTTGCTTTGTCTTTTCATCTCTCTCGTCCCATTCGGATGTTTACTAAAGGCGATTCAGAGAGAAATAGTCAGTCATTTCACTAGAGAGTTACCTGTTGATGACATGAAGGGTAGCTTCACTTGTTCTGTGTAAAGTTGACCTTATTTACTTCCCAACAATAGTTTCTATTAGTTTTAGATTATAACACATGCTGGACCTGTTAGAGCACATGCTCACATGCATCTGTTATTGTAAACTTTTTTTAATATAAAAACTATAGTTTGACTTT</genome_strand>
        <mrna_strand>CTGATATTGGTATGTGGTCATCATTGCCAATCTTGCCATCTCCTTGGATTATGGGCCCAAGATACTTGAAGCTTCCTCTCTTAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCAATTGGACAAACAACAGATGTACAAAAGGGAGCTTCTTTGTTTAATCGAGCTTGCATTGGATGTCATTATGAAGGTGGAAATATAATCCAGCCT...................................................................................GGTGCGACACTCTTCTTGAAGGATCTACAAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATGGAGTTGACACGGAAGAGGAAATCTACCGCGTCACTTACAATGGCAAAGGGAGAATGCCA...............................................................................GGGTTTGGTCAGAATTGTACACCAAGGGGTCAATGCACTTTTGGTCCTCGATTACAAGACGATGAAATTAAACTCTTAGCTGAGTTTGTGAAGTCTCAAGCTGATCAAGATTGGCCTAAAATCGAAAACAGTGGAGATTGAAAATAACTATTAGTACTTCACAATTGTTCAAAATGTGCATATCATGTTTCTCAGTTGCTTTGTCTTTTCATCTCTCTCGTCCCATTCGGATGTTTACTAAAGGCGATTCAGAGAGAAATAGTCAGTCATTTCACTAGAGAGTTACCTGTTGATGACATGAAGGGTAGCTTCACTTGTTCTGTGTAAAGTTGACCTTATTTACTTCCCAACAATAGTTTCTATTAGTTTTAGATTATAACACATGCTGGACCTGTTAGAGCACATGCTCACATGCATCTGTTATTGTAAACTTTTTTTAATATAAAAACTATAGTTTGACTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0002K14-GUpky/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E452307" ref_strand="+" ref_description="SGN-E452307 [cSTS-16-I14]">
      <seq>aaaagggagctgctttgtttaatcgagcttgcattggatgtcattatgaaggtggaaatataatccagcctggtgcgacactcttcttgaaggatctacaaagaaatggagttgacacggaagaggagatctatcgtgtcacttactatggcaaagggagaatgccagggtttggtcagaattgtacaccaaggggtcaatgcacatttggtcctcgattacaagacgatgaaattaaactcttagctgagtttgtgaagtctcaagctgatcaagattggcctaaaatcgaaaacagtggagattgaaaataactattagtacttcacaattgttcaaaatgtgcatatcatgtttctcaattccttcgtcttttcatctcccccgtcccattcgatgtttactaaaggcgattcagagagaaatagtcagtcctttcactagtgatttacctgttgatgacatgaagggtagcttcacttgttctgtgtaaagttgaccttgttttcttcccaacaatagtttctattagttttagatataccacatgctggacctgctagagcaacatgcccacatgcatctgttgttatgaactttttatatatataaaaactatagtttgacttaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0002K14-GUpky/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0002K14.1" temp_strand="+" temp_description="C02SLe0002K14.1  AC215442.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0002K14 sequenced_by:kribb upload_account_name:korea">
        <position start="129250" stop="131408"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="129550" g_stop="129620" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="71" r_length="71" r_score="0.986"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="129621" i_stop="129703" i_length="83">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.789" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="129704" g_stop="129735" g_length="32"/>
          <reference_exon_boundary r_type="cDNA" r_start="72" r_stop="103" r_length="32" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="129736" i_stop="130501" i_length="766">
            <donor d_prob="0.998" d_score="0.00"/>
            <acceptor a_prob="0.696" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="130502" g_stop="130565" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="104" r_stop="167" r_length="64" r_score="0.938"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="130566" i_stop="130644" i_length="79">
            <donor d_prob="0.996" d_score="0.92"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="130645" g_stop="131107" g_length="463"/>
          <reference_exon_boundary r_type="cDNA" r_start="168" r_stop="630" r_length="463" r_score="0.946"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0002K14.1" gen_strand="+" ref_id="SGN-E452307" ref_strand="+">
        <total_alignment_score>0.950</total_alignment_score>
        <cumulative_length_of_scored_exons>630</cumulative_length_of_scored_exons>
        <coverage percentage="0.986" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0002K14.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E452307" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="129550" e_stop="129620"/>
          <exon e_start="129704" e_stop="129735"/>
          <exon e_start="130502" e_stop="130565"/>
          <exon e_start="130645" e_stop="131107"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAGGGAGCTTCTTTGTTTAATCGAGCTTGCATTGGATGTCATTATGAAGGTGGAAATATAATCCAGCCTGTGAGTCTTACCTACCTCGTGATTCCGGTAGTCGTCGAAAATTTCCAGCTCACCTTAATTATCTTTCCTTTGTTATATGCTAGGGTGCGACACTCTTCTTGAAGGATCTACAAAGGTAAAAAATTAAAATCCACAGAGAAGATTTTTGTTTTGCTTGTAACTTCTTTGAGCATGTCACAAGTTCCTTAGAACTTTCTGTATCTGAATAGAAACCAGAAGTTCAAAGAAAAGGTACTTAAGTATTTACACTCCAGTAAAAGTATTACCAGACTTGAGACGACTTTTCAGATGTTTAGTTTAATTTCATGTACGGGGAATGGTGAGTAAGTTTAAAAGATATTCACAGCAACTTGAAGTTCAGAATAATAGTCCATATGCTAGCTCCTCTGTATTTAACTATCTATACCTTTTCCTGGCTCTAAATGAAAGGCTCTTTATTGACTTAAGATGTGTTCTCTCGTTCCCTTTCGCTTCTAATACTTAGCAGATCAAATTTTCTGAACATGAGAATTTCGTTTGGCGTATTCAATTCTTGTGAGGAAAACATATAGATAGAAGGTAAACTGAATATAATTTTTTTGAACAATAGATTGTGCAGCAAACTAATTTTCCTATAACATACGCGAGCTAAGAGTAAAGCTACAGTACATTGTTTCATTGAATTGTTAATTTTATTAATCAGCATTTACATAGTTTGACAAGACCAATTCTTAACAGACAAGAGGTTATTTCATCTCAACTTTTGAGAGATTTTTATTGTCTTGCTGTCTATCATATTCTATTCATTGTCATCTTTTCGTATGCATAGTTGAGATGCAATTTGTCATATCATTATGCAAAAACAACATGGGCAACTTTTAACTAGCTACTCTTCTGTATAGAAATGGAGTTGACACGGAAGAGGAAATCTACCGCGTCACTTACAATGGCAAAGGGAGAATGCCAGTAAGTTTATATTGTTCAGAACCATGGTTGTCTTTATGCTGTTGTGTCGTACACCTTATTGTGCTGTCTGGATTTGCAGGGGTTTGGTCAGAATTGTACACCAAGGGGTCAATGCACTTTTGGTCCTCGATTACAAGACGATGAAATTAAACTCTTAGCTGAGTTTGTGAAGTCTCAAGCTGATCAAGATTGGCCTAAAATCGAAAACAGTGGAGATTGAAAATAACTATTAGTACTTCACAATTGTTCAAAATGTGCATATCATGTTTCTCAGTTGCTTTGTCTTTTCATCTCTCTCGTCCCATTCGGATGTTTACTAAAGGCGATTCAGAGAGAAATAGTCAGTCATTTCACTAGAGAGTTACCTGTTGATGACATGAAGGGTAGCTTCACTTGTTCTGTGTAAAGTTGACCTTATTTACTTCCCAACAATAGTTTCTATTAGTTTTAGATTATAACACATGCTGGACCTGTTAGAGC-ACATGCTCACATGCATCTGTTATTGTAAACTTTTTTTA-ATATAAAAACTATAGTTTGACTTT</genome_strand>
        <mrna_strand>AAAAGGGAGCTGCTTTGTTTAATCGAGCTTGCATTGGATGTCATTATGAAGGTGGAAATATAATCCAGCCT...................................................................................GGTGCGACACTCTTCTTGAAGGATCTACAAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATGGAGTTGACACGGAAGAGGAGATCTATCGTGTCACTTACTATGGCAAAGGGAGAATGCCA...............................................................................GGGTTTGGTCAGAATTGTACACCAAGGGGTCAATGCACATTTGGTCCTCGATTACAAGACGATGAAATTAAACTCTTAGCTGAGTTTGTGAAGTCTCAAGCTGATCAAGATTGGCCTAAAATCGAAAACAGTGGAGATTGAAAATAACTATTAGTACTTCACAATTGTTCAAAATGTGCATATCATGTTTCTCAATTCCTTCGTCTTTTCATCTCCCCCGTCCCATTC-GATGTTTACTAAAGGCGATTCAGAGAGAAATAGTCAGTCCTTTCACTAGTGATTTACCTGTTGATGACATGAAGGGTAGCTTCACTTGTTCTGTGTAAAGTTGACCTTGTTTTCTTCCCAACAATAGTTTCTATTAGTTTTAGA-TATACCACATGCTGGACCTGCTAGAGCAACATGCCCACATGCATCTGTTGTTATGAACTTTTTATATATATAAAAACTATAGTTTGACTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0002K14-GUpky/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E424390" ref_strand="+" ref_description="SGN-E424390 [STM-43-D1]">
      <seq>aaaagggagctgctttgtttaatcgagcttgcattggatgtcattatgaaggtggaaatataatccagcctggtgcgacactcttcttgaaggatctacaaagaaatggagttgacacggaagaggagatctatcgtgtcacttactatggcaaagggagaatgccagggtttggtcagaattgtacaccaaggggtcaatgcacatttggtcctcgattacaagacgatgaaattaaactcttagctgagtttgtgaagtctcaagctgatcaagattggcctaaaatcgaaaacagtggagattgaaaataactattagtacttcacaattgttcaaaatgtgcatatcatgtttctcaattccttcgtcttttcatctcccccgtcccattcgatgtttactaaaggcgattcagaagagaatagtcagtcctttcactagtgatttacctgttgatgacatgaaaggtagcttcacttgntctgtgtaaagntgacctttgtttcttcccnnacatagtttctattagttttagatataccacatgctggacctgctagaagcacatgcccacatgcatctgttggtatgaactttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0002K14-GUpky/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0002K14.1" temp_strand="+" temp_description="C02SLe0002K14.1  AC215442.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0002K14 sequenced_by:kribb upload_account_name:korea">
        <position start="129250" stop="131379"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="129550" g_stop="129620" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="71" r_length="71" r_score="0.986"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="129621" i_stop="129703" i_length="83">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.789" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="129704" g_stop="129735" g_length="32"/>
          <reference_exon_boundary r_type="cDNA" r_start="72" r_stop="103" r_length="32" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="129736" i_stop="130501" i_length="766">
            <donor d_prob="0.998" d_score="0.00"/>
            <acceptor a_prob="0.696" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="130502" g_stop="130565" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="104" r_stop="167" r_length="64" r_score="0.938"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="130566" i_stop="130644" i_length="79">
            <donor d_prob="0.996" d_score="0.92"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="130645" g_stop="131079" g_length="435"/>
          <reference_exon_boundary r_type="cDNA" r_start="168" r_stop="601" r_length="434" r_score="0.924"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0002K14.1" gen_strand="+" ref_id="SGN-E424390" ref_strand="+">
        <total_alignment_score>0.933</total_alignment_score>
        <cumulative_length_of_scored_exons>602</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0002K14.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E424390" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="129550" e_stop="129620"/>
          <exon e_start="129704" e_stop="129735"/>
          <exon e_start="130502" e_stop="130565"/>
          <exon e_start="130645" e_stop="131079"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAGGGAGCTTCTTTGTTTAATCGAGCTTGCATTGGATGTCATTATGAAGGTGGAAATATAATCCAGCCTGTGAGTCTTACCTACCTCGTGATTCCGGTAGTCGTCGAAAATTTCCAGCTCACCTTAATTATCTTTCCTTTGTTATATGCTAGGGTGCGACACTCTTCTTGAAGGATCTACAAAGGTAAAAAATTAAAATCCACAGAGAAGATTTTTGTTTTGCTTGTAACTTCTTTGAGCATGTCACAAGTTCCTTAGAACTTTCTGTATCTGAATAGAAACCAGAAGTTCAAAGAAAAGGTACTTAAGTATTTACACTCCAGTAAAAGTATTACCAGACTTGAGACGACTTTTCAGATGTTTAGTTTAATTTCATGTACGGGGAATGGTGAGTAAGTTTAAAAGATATTCACAGCAACTTGAAGTTCAGAATAATAGTCCATATGCTAGCTCCTCTGTATTTAACTATCTATACCTTTTCCTGGCTCTAAATGAAAGGCTCTTTATTGACTTAAGATGTGTTCTCTCGTTCCCTTTCGCTTCTAATACTTAGCAGATCAAATTTTCTGAACATGAGAATTTCGTTTGGCGTATTCAATTCTTGTGAGGAAAACATATAGATAGAAGGTAAACTGAATATAATTTTTTTGAACAATAGATTGTGCAGCAAACTAATTTTCCTATAACATACGCGAGCTAAGAGTAAAGCTACAGTACATTGTTTCATTGAATTGTTAATTTTATTAATCAGCATTTACATAGTTTGACAAGACCAATTCTTAACAGACAAGAGGTTATTTCATCTCAACTTTTGAGAGATTTTTATTGTCTTGCTGTCTATCATATTCTATTCATTGTCATCTTTTCGTATGCATAGTTGAGATGCAATTTGTCATATCATTATGCAAAAACAACATGGGCAACTTTTAACTAGCTACTCTTCTGTATAGAAATGGAGTTGACACGGAAGAGGAAATCTACCGCGTCACTTACAATGGCAAAGGGAGAATGCCAGTAAGTTTATATTGTTCAGAACCATGGTTGTCTTTATGCTGTTGTGTCGTACACCTTATTGTGCTGTCTGGATTTGCAGGGGTTTGGTCAGAATTGTACACCAAGGGGTCAATGCACTTTTGGTCCTCGATTACAAGACGATGAAATTAAACTCTTAGCTGAGTTTGTGAAGTCTCAAGCTGATCAAGATTGGCCTAAAATCGAAAACAGTGGAGATTGAAAATAACTATTAGTACTTCACAATTGTTCAAAATGTGCATATCATGTTTCTCAGTTGCTTTGTCTTTTCATCTCTCTCGTCCCATTCGGATGTTTACTAAAGGCGATTCAG-AGAGAAATAGTCAGTCATTTCACTAGAGAGTTACCTGTTGATGACATGAAGGGTAGCTTCACTTGTTCTGTGTAAAGTTGACCTTATTTACTTCCCAACAATAGTTTCTATTAGTTTTAGATTATAACACATGCTGGACCTGTTAG-AGCACATGCTCACATGCATCTGTTATTGTAAACTTTT</genome_strand>
        <mrna_strand>AAAAGGGAGCTGCTTTGTTTAATCGAGCTTGCATTGGATGTCATTATGAAGGTGGAAATATAATCCAGCCT...................................................................................GGTGCGACACTCTTCTTGAAGGATCTACAAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATGGAGTTGACACGGAAGAGGAGATCTATCGTGTCACTTACTATGGCAAAGGGAGAATGCCA...............................................................................GGGTTTGGTCAGAATTGTACACCAAGGGGTCAATGCACATTTGGTCCTCGATTACAAGACGATGAAATTAAACTCTTAGCTGAGTTTGTGAAGTCTCAAGCTGATCAAGATTGGCCTAAAATCGAAAACAGTGGAGATTGAAAATAACTATTAGTACTTCACAATTGTTCAAAATGTGCATATCATGTTTCTCAATTCCTTCGTCTTTTCATCTCCCCCGTCCCATTC-GATGTTTACTAAAGGCGATTCAGAAGAG-AATAGTCAGTCCTTTCACTAGTGATTTACCTGTTGATGACATGAAAGGTAGCTTCACTTGNTCTGTGTAAAGNTGACCTTTGTTTCTTCCCNNACATAGTTTCTATTAGTTTTAGA-TATACCACATGCTGGACCTGCTAGAAGCACATGCCCACATGCATCTGTTGGTATGAACTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0002K14-GUpky/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E424391" ref_strand="-" ref_description="SGN-E424391 [STM-43-D1]">
      <seq>aaaagggagctgctttgtttaatcgagcttgcattggatgtcattatgaaggtggaaatataatccagcctggtgcgacactcttcttgaaggatctacaaagaaatggagttgacacggaagaggagatctatcgtgtcacttactatggcaaagggagaatgccagggtttggtcagaattgtacaccaaggggtcaatgcacatttggtcctcgattacaagacgatgaaattaaactcttagctgagtttgtgaagtctcaagctgatcaagattggcctaaaatcgaaaacagtggagattgaaaataactattagtacttcacaattgttcaaaatgtgcatatcatgtttctcaattccttcgtcttttcatctcccccgtcccattcgatgtttactaaaggcgattcagagagaaatagtcagtcctttcactagtgatttacctgttgatgacatgaagggtagcttcacttgttctgtgtaaagttgaccttgttttcttcccaacaatagtttctattagttttagatataccacatgctggacctgctagagcaacatgcccacatgcatctgttgttatgaactttttatagataaaaaactatagttgccctcaatttatagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0002K14-GUpky/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0002K14.1" temp_strand="+" temp_description="C02SLe0002K14.1  AC215442.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0002K14 sequenced_by:kribb upload_account_name:korea">
        <position start="129250" stop="131408"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="129550" g_stop="129620" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="71" r_length="71" r_score="0.986"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="129621" i_stop="129703" i_length="83">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.789" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="129704" g_stop="129735" g_length="32"/>
          <reference_exon_boundary r_type="cDNA" r_start="72" r_stop="103" r_length="32" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="129736" i_stop="130501" i_length="766">
            <donor d_prob="0.998" d_score="0.00"/>
            <acceptor a_prob="0.696" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="130502" g_stop="130565" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="104" r_stop="167" r_length="64" r_score="0.938"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="130566" i_stop="130644" i_length="79">
            <donor d_prob="0.996" d_score="0.92"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="130645" g_stop="131069" g_length="425"/>
          <reference_exon_boundary r_type="cDNA" r_start="168" r_stop="591" r_length="424" r_score="0.955"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0002K14.1" gen_strand="+" ref_id="SGN-E424391" ref_strand="-">
        <total_alignment_score>0.957</total_alignment_score>
        <cumulative_length_of_scored_exons>592</cumulative_length_of_scored_exons>
        <coverage percentage="0.928" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0002K14.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E424391" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="129550" e_stop="129620"/>
          <exon e_start="129704" e_stop="129735"/>
          <exon e_start="130502" e_stop="130565"/>
          <exon e_start="130645" e_stop="131069"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAGGGAGCTTCTTTGTTTAATCGAGCTTGCATTGGATGTCATTATGAAGGTGGAAATATAATCCAGCCTGTGAGTCTTACCTACCTCGTGATTCCGGTAGTCGTCGAAAATTTCCAGCTCACCTTAATTATCTTTCCTTTGTTATATGCTAGGGTGCGACACTCTTCTTGAAGGATCTACAAAGGTAAAAAATTAAAATCCACAGAGAAGATTTTTGTTTTGCTTGTAACTTCTTTGAGCATGTCACAAGTTCCTTAGAACTTTCTGTATCTGAATAGAAACCAGAAGTTCAAAGAAAAGGTACTTAAGTATTTACACTCCAGTAAAAGTATTACCAGACTTGAGACGACTTTTCAGATGTTTAGTTTAATTTCATGTACGGGGAATGGTGAGTAAGTTTAAAAGATATTCACAGCAACTTGAAGTTCAGAATAATAGTCCATATGCTAGCTCCTCTGTATTTAACTATCTATACCTTTTCCTGGCTCTAAATGAAAGGCTCTTTATTGACTTAAGATGTGTTCTCTCGTTCCCTTTCGCTTCTAATACTTAGCAGATCAAATTTTCTGAACATGAGAATTTCGTTTGGCGTATTCAATTCTTGTGAGGAAAACATATAGATAGAAGGTAAACTGAATATAATTTTTTTGAACAATAGATTGTGCAGCAAACTAATTTTCCTATAACATACGCGAGCTAAGAGTAAAGCTACAGTACATTGTTTCATTGAATTGTTAATTTTATTAATCAGCATTTACATAGTTTGACAAGACCAATTCTTAACAGACAAGAGGTTATTTCATCTCAACTTTTGAGAGATTTTTATTGTCTTGCTGTCTATCATATTCTATTCATTGTCATCTTTTCGTATGCATAGTTGAGATGCAATTTGTCATATCATTATGCAAAAACAACATGGGCAACTTTTAACTAGCTACTCTTCTGTATAGAAATGGAGTTGACACGGAAGAGGAAATCTACCGCGTCACTTACAATGGCAAAGGGAGAATGCCAGTAAGTTTATATTGTTCAGAACCATGGTTGTCTTTATGCTGTTGTGTCGTACACCTTATTGTGCTGTCTGGATTTGCAGGGGTTTGGTCAGAATTGTACACCAAGGGGTCAATGCACTTTTGGTCCTCGATTACAAGACGATGAAATTAAACTCTTAGCTGAGTTTGTGAAGTCTCAAGCTGATCAAGATTGGCCTAAAATCGAAAACAGTGGAGATTGAAAATAACTATTAGTACTTCACAATTGTTCAAAATGTGCATATCATGTTTCTCAGTTGCTTTGTCTTTTCATCTCTCTCGTCCCATTCGGATGTTTACTAAAGGCGATTCAGAGAGAAATAGTCAGTCATTTCACTAGAGAGTTACCTGTTGATGACATGAAGGGTAGCTTCACTTGTTCTGTGTAAAGTTGACCTTATTTACTTCCCAACAATAGTTTCTATTAGTTTTAGATTATAACACATGCTGGACCTGTTAGAGC-ACATGCTCACATGCATCTGTTATT</genome_strand>
        <mrna_strand>AAAAGGGAGCTGCTTTGTTTAATCGAGCTTGCATTGGATGTCATTATGAAGGTGGAAATATAATCCAGCCT...................................................................................GGTGCGACACTCTTCTTGAAGGATCTACAAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATGGAGTTGACACGGAAGAGGAGATCTATCGTGTCACTTACTATGGCAAAGGGAGAATGCCA...............................................................................GGGTTTGGTCAGAATTGTACACCAAGGGGTCAATGCACATTTGGTCCTCGATTACAAGACGATGAAATTAAACTCTTAGCTGAGTTTGTGAAGTCTCAAGCTGATCAAGATTGGCCTAAAATCGAAAACAGTGGAGATTGAAAATAACTATTAGTACTTCACAATTGTTCAAAATGTGCATATCATGTTTCTCAATTCCTTCGTCTTTTCATCTCCCCCGTCCCATTC-GATGTTTACTAAAGGCGATTCAGAGAGAAATAGTCAGTCCTTTCACTAGTGATTTACCTGTTGATGACATGAAGGGTAGCTTCACTTGTTCTGTGTAAAGTTGACCTTGTTTTCTTCCCAACAATAGTTTCTATTAGTTTTAGA-TATACCACATGCTGGACCTGCTAGAGCAACATGCCCACATGCATCTGTTGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>41</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="+" PGL_start="8891" PGL_stop="18901"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="8891" e_stop="8957"/>
            <exon e_start="9067" e_stop="9200"/>
            <exon e_start="16621" e_stop="16686"/>
            <exon e_start="17369" e_stop="17824"/>
            <exon e_start="18455" e_stop="18901"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.971" e_score="1.000"/>
          <exon-intron don_prob="0.965" acc_prob="0.532" e_score="1.000"/>
          <exon-intron don_prob="0.856" acc_prob="0.936" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.988" e_score="0.998"/>
          <exon-only e_score="0.987"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="8891" e_stop="8957" e_length="67"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.971">
            <gDNA_intron_boundary i_start="8958" i_stop="9066" i_length="109"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="9067" e_stop="9200" e_length="134"/>
          </exon>
          <intron i_serial="2" don_prob="0.965" acc_prob="0.532">
            <gDNA_intron_boundary i_start="9201" i_stop="16620" i_length="7420"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="16621" e_stop="16686" e_length="66"/>
          </exon>
          <intron i_serial="3" don_prob="0.856" acc_prob="0.936">
            <gDNA_intron_boundary i_start="16687" i_stop="17368" i_length="682"/>
          </intron>
          <exon e_serial="4" e_score="0.998">
            <gDNA_exon_boundary e_start="17369" e_stop="17824" e_length="456"/>
          </exon>
          <intron i_serial="4" don_prob="0.998" acc_prob="0.988">
            <gDNA_intron_boundary i_start="17825" i_stop="18454" i_length="630"/>
          </intron>
          <exon e_serial="5" e_score="0.987">
            <gDNA_exon_boundary e_start="18455" e_stop="18901" e_length="447"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="8891" stop="8957"/>
              <exon start="9067" stop="9200"/>
              <exon start="16621" stop="16686"/>
              <exon start="17369" stop="17630"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E318424" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="8892" stop="8957"/>
              <exon start="9067" stop="9200"/>
              <exon start="16621" stop="16686"/>
              <exon start="17369" stop="17773"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E342979" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="8933" stop="8957"/>
              <exon start="9067" stop="9200"/>
              <exon start="16621" stop="16686"/>
              <exon start="17369" stop="17817"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E322633" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="9067" stop="9200"/>
              <exon start="16621" stop="16686"/>
              <exon start="17369" stop="17824"/>
              <exon start="18455" stop="18536"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E554775" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17807" stop="17824"/>
              <exon start="18455" stop="18901"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E393883" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGAAGCCTTCACTAAGCCAAAAGAAAATGGCGGTCTTCTCTATGATGCTTTGGCAAGACCTACAAAG : CTTTGATTGTTTAGGTGTGTAAAGAAGACAACCCATTTGCCCAAAAGGAGAATAAATTAGCATGTGAGCTGAAGTTTCTGAAGAAATTGGCTTCGCTTGCCTTTATAACCCTCTTTCCCATTGTCAATTTCAAG : ATATTTACTACAGTTGTCTTCTTCTCTTCATTTAATGAGATATCAGTGATGCCTCATCAGAACCAG : GGACAAAATGGGCAGCAGGGTATGTGGATGTACCAATGCATCCATTGTAAAAAAAACTTCCCTTCAAGCCAGGCCATAGCAGGCCATACAAAGGGTCATTTCAGAGATGGCTGGGTTAAAGGAACCCCCCAGAGCAAAGTATTTGTACTATTTTCTGAGTATCAGCAACAGCAGGGTTCTATCACTGACTCTTCAATTCCCGAGAAACAGATTTTTTCTGCAGCAACTTCTGACACTGACTTAGCAGATGCTCATCAATTGCAAATAGGTGATGTGCAGAATTCCAGAAGCCTGGTCGTGCGGCCTCCATCTCCAGCTTCGTCTAGCAGAGAACCACGAATCCCTAGGCATCATTTGAGGCTTCGTGATCTGAAGATACTAGCTAGGCTAAGGGCTCGTCTTACCAGAGAGGAGCAAGAAGTCATTTTGCGTCTTCTTGATAGTGCTATGGAACAG : GCAAAACAATCAAGCAAGAAGAGCACTGAGGCGGAGGTGATCCCTAATAGAAACTCAGAAGCAGCAGCCGTGATTGGAACTACTGACACAGATACCGATGTGTCCTCTGAGGAATCAGATGATGAGTCCAAAAATATGTGATCCTATGGTTGAAGCATATATGCAATAGTTTCTGGGCTATTTCTTATTAGTTATGGTTCCGAAGATTGTTCAAATTATTAGTGAAGTGTTTTATTAGATATATGAACAGTATAATGTTGTTGCTTTTTTAGATCATCTAAGAGTAGTGTTGAACAAGGTTCTTCCCTTTATCCCCTCTGTTGAATTTATGTATATGTGACTGTTACTGAGGCTTTGTCTGTGAGGCCTTGGTTGCTTTATTAATTGAAGATATTATGTATGTTTTGCTATTATGAAGGAAGCCAACTGTTACACTTATAGCATAGG</gDNA_template>
            <first_frame> R  S  L  H  *  A  K  R  K  W  R  S  S  L  *  C  F  G  K  T  Y  K   : A  L  I  V  *  V  C  K  E  D  N  P  F  A  Q  K  E  N  K  L  A  C  E  L  K  F  L  K  K  L  A  S  L  A  F  I  T  L  F  P  I  V  N  F  K  :  I  F  T  T  V  V  F  F  S  S  F  N  E  I  S  V  M  P  H  Q  N  Q  :  G  Q  N  G  Q  Q  G  M  W  M  Y  Q  C  I  H  C  K  K  N  F  P  S  S  Q  A  I  A  G  H  T  K  G  H  F  R  D  G  W  V  K  G  T  P  Q  S  K  V  F  V  L  F  S  E  Y  Q  Q  Q  Q  G  S  I  T  D  S  S  I  P  E  K  Q  I  F  S  A  A  T  S  D  T  D  L  A  D  A  H  Q  L  Q  I  G  D  V  Q  N  S  R  S  L  V  V  R  P  P  S  P  A  S  S  S  R  E  P  R  I  P  R  H  H  L  R  L  R  D  L  K  I  L  A  R  L  R  A  R  L  T  R  E  E  Q  E  V  I  L  R  L  L  D  S  A  M  E  Q  :  A  K  Q  S  S  K  K  S  T  E  A  E  V  I  P  N  R  N  S  E  A  A  A  V  I  G  T  T  D  T  D  T  D  V  S  S  E  E  S  D  D  E  S  K  N  M  *  S  Y  G  *  S  I  Y  A  I  V  S  G  L  F  L  I  S  Y  G  S  E  D  C  S  N  Y  *  *  S  V  L  L  D  I  *  T  V  *  C  C  C  F  F  R  S  S  K  S  S  V  E  Q  G  S  S  L  Y  P  L  C  *  I  Y  V  Y  V  T  V  T  E  A  L  S  V  R  P  W  L  L  Y  *  L  K  I  L  C  M  F  C  Y  Y  E  G  S  Q  L  L  H  L  *  H  R </first_frame>
            <second_frame>  E  A  F  T  K  P  K  E  N  G  G  L  L  Y  D  A  L  A  R  P  T  K  :  L  *  L  F  R  C  V  K  K  T  T  H  L  P  K  R  R  I  N  *  H  V  S  *  S  F  *  R  N  W  L  R  L  P  L  *  P  S  F  P  L  S  I  S  R :   Y  L  L  Q  L  S  S  S  L  H  L  M  R  Y  Q  *  C  L  I  R  T  R :   D  K  M  G  S  R  V  C  G  C  T  N  A  S  I  V  K  K  T  S  L  Q  A  R  P  *  Q  A  I  Q  R  V  I  S  E  M  A  G  L  K  E  P  P  R  A  K  Y  L  Y  Y  F  L  S  I  S  N  S  R  V  L  S  L  T  L  Q  F  P  R  N  R  F  F  L  Q  Q  L  L  T  L  T  *  Q  M  L  I  N  C  K  *  V  M  C  R  I  P  E  A  W  S  C  G  L  H  L  Q  L  R  L  A  E  N  H  E  S  L  G  I  I  *  G  F  V  I  *  R  Y  *  L  G  *  G  L  V  L  P  E  R  S  K  K  S  F  C  V  F  L  I  V  L  W  N  R :   Q  N  N  Q  A  R  R  A  L  R  R  R  *  S  L  I  E  T  Q  K  Q  Q  P  *  L  E  L  L  T  Q  I  P  M  C  P  L  R  N  Q  M  M  S  P  K  I  C  D  P  M  V  E  A  Y  M  Q  *  F  L  G  Y  F  L  L  V  M  V  P  K  I  V  Q  I  I  S  E  V  F  Y  *  I  Y  E  Q  Y  N  V  V  A  F  L  D  H  L  R  V  V  L  N  K  V  L  P  F  I  P  S  V  E  F  M  Y  M  *  L  L  L  R  L  C  L  *  G  L  G  C  F  I  N  *  R  Y  Y  V  C  F  A  I  M  K  E  A  N  C  Y  T  Y  S  I   </second_frame>
            <third_frame>   K  P  S  L  S  Q  K  K  M  A  V  F  S  M  M  L  W  Q  D  L  Q  S :   F  D  C  L  G  V  *  R  R  Q  P  I  C  P  K  G  E  *  I  S  M  *  A  E  V  S  E  E  I  G  F  A  C  L  Y  N  P  L  S  H  C  Q  F  Q   : D  I  Y  Y  S  C  L  L  L  F  I  *  *  D  I  S  D  A  S  S  E  P   : G  T  K  W  A  A  G  Y  V  D  V  P  M  H  P  L  *  K  K  L  P  F  K  P  G  H  S  R  P  Y  K  G  S  F  Q  R  W  L  G  *  R  N  P  P  E  Q  S  I  C  T  I  F  *  V  S  A  T  A  G  F  Y  H  *  L  F  N  S  R  E  T  D  F  F  C  S  N  F  *  H  *  L  S  R  C  S  S  I  A  N  R  *  C  A  E  F  Q  K  P  G  R  A  A  S  I  S  S  F  V  *  Q  R  T  T  N  P  *  A  S  F  E  A  S  *  S  E  D  T  S  *  A  K  G  S  S  Y  Q  R  G  A  R  S  H  F  A  S  S  *  *  C  Y  G  T   : G  K  T  I  K  Q  E  E  H  *  G  G  G  D  P  *  *  K  L  R  S  S  S  R  D  W  N  Y  *  H  R  Y  R  C  V  L  *  G  I  R  *  *  V  Q  K  Y  V  I  L  W  L  K  H  I  C  N  S  F  W  A  I  S  Y  *  L  W  F  R  R  L  F  K  L  L  V  K  C  F  I  R  Y  M  N  S  I  M  L  L  L  F  *  I  I  *  E  *  C  *  T  R  F  F  P  L  S  P  L  L  N  L  C  I  C  D  C  Y  *  G  F  V  C  E  A  L  V  A  L  L  I  E  D  I  M  Y  V  L  L  L  *  R  K  P  T  V  T  L  I  A  *  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0002K14.1" strand="+"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="9081" stop="9200"/>
                    <exon start="16621" stop="16686"/>
                    <exon start="17369" stop="17824"/>
                    <exon start="18455" stop="18595"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>780</number_coding_nucleotides>
                  <number_encoded_amino_acids>260</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VCKEDNPFAQKENKLACELKFLKKLASLAFITLFPIVNFKIFTTVVFFSSFNEISVMPHQNQGQNGQQGMWMYQCIHCKKNFPSSQAIAGHTKGHFRDGWVKGTPQSKVFVLFSEYQQQQGSITDSSIPEKQIFSAATSDTDLADAHQLQIGDVQNSRSLVVRPPSPASSSREPRIPRHHLRLRDLKILARLRARLTREEQEVILRLLDSAMEQAKQSSKKSTEAEVIPNRNSEAAAVIGTTDTDTDVSSEESDDESKNM*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="8903" e_stop="8957"/>
            <exon e_start="9081" e_stop="9200"/>
            <exon e_start="16621" e_stop="16686"/>
            <exon e_start="17369" e_stop="17824"/>
            <exon e_start="18455" e_stop="18901"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.951" e_score="1.000"/>
          <exon-intron don_prob="0.965" acc_prob="0.532" e_score="1.000"/>
          <exon-intron don_prob="0.856" acc_prob="0.936" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.988" e_score="0.976"/>
          <exon-only e_score="0.987"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="8903" e_stop="8957" e_length="55"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.951">
            <gDNA_intron_boundary i_start="8958" i_stop="9080" i_length="123"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="9081" e_stop="9200" e_length="120"/>
          </exon>
          <intron i_serial="2" don_prob="0.965" acc_prob="0.532">
            <gDNA_intron_boundary i_start="9201" i_stop="16620" i_length="7420"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="16621" e_stop="16686" e_length="66"/>
          </exon>
          <intron i_serial="3" don_prob="0.856" acc_prob="0.936">
            <gDNA_intron_boundary i_start="16687" i_stop="17368" i_length="682"/>
          </intron>
          <exon e_serial="4" e_score="0.976">
            <gDNA_exon_boundary e_start="17369" e_stop="17824" e_length="456"/>
          </exon>
          <intron i_serial="4" don_prob="0.998" acc_prob="0.988">
            <gDNA_intron_boundary i_start="17825" i_stop="18454" i_length="630"/>
          </intron>
          <exon e_serial="5" e_score="0.987">
            <gDNA_exon_boundary e_start="18455" e_stop="18901" e_length="447"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="8903" stop="8957"/>
              <exon start="9081" stop="9200"/>
              <exon start="16621" stop="16686"/>
              <exon start="17369" stop="17749"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E298086" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="8907" stop="8957"/>
              <exon start="9081" stop="9200"/>
              <exon start="16621" stop="16686"/>
              <exon start="17369" stop="17644"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E298030" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="8936" stop="8957"/>
              <exon start="9081" stop="9200"/>
              <exon start="16621" stop="16686"/>
              <exon start="17369" stop="17824"/>
              <exon start="18455" stop="18488"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E560550" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17807" stop="17824"/>
              <exon start="18455" stop="18901"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E393883" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TAAGCCAAAAGAAAATGGCGGTCTTCTCTATGATGCTTTGGCAAGACCTACAAAG : GTGTGTAAAGAAGACAACCCATTTGCCCAAAAGGAGAATAAATTAGCATGTGAGCTGAAGTTTCTGAAGAAATTGGCTTCGCTTGCCTTTATAACCCTCTTTCCCATTGTCAATTTCAAG : ATATTTACTACAGTTGTCTTCTTCTCTTCATTTAATGAGATATCAGTGATGCCTCATCAGAACCAG : GGACAAAATGGGCAGCAGGGTATGTGGATGTACCAATGCATCCATTGTAAAAAAAACTTCCCTTCAAGCCAGGCCATAGCAGGCCATACAAAGGGTCATTTCAGAGATGGCTGGGTTAAAGGAACCCCCCAGAGCAAAGTATTTGTACTATTTTCTGAGTATCAGCAACAGCAGGGTTCTATCACTGACTCTTCAATTCCCGAGAAACAGATTTTTTCTGCAGCAACTTCTGACACTGACTTAGCAGATGCTCATCAATTGCAAATAGGTGATGTGCAGAATTCCAGAAGCCTGGTCGTGCGGCCTCCATCTCCAGCTTCGTCTAGCAGAGAACCACGAATCCCTAGGCATCATTTGAGGCTTCGTGATCTGAAGATACTAGCTAGGCTAAGGGCTCGTCTTACCAGAGAGGAGCAAGAAGTCATTTTGCGTCTTCTTGATAGTGCTATGGAACAG : GCAAAACAATCAAGCAAGAAGAGCACTGAGGCGGAGGTGATCCCTAATAGAAACTCAGAAGCAGCAGCCGTGATTGGAACTACTGACACAGATACCGATGTGTCCTCTGAGGAATCAGATGATGAGTCCAAAAATATGTGATCCTATGGTTGAAGCATATATGCAATAGTTTCTGGGCTATTTCTTATTAGTTATGGTTCCGAAGATTGTTCAAATTATTAGTGAAGTGTTTTATTAGATATATGAACAGTATAATGTTGTTGCTTTTTTAGATCATCTAAGAGTAGTGTTGAACAAGGTTCTTCCCTTTATCCCCTCTGTTGAATTTATGTATATGTGACTGTTACTGAGGCTTTGTCTGTGAGGCCTTGGTTGCTTTATTAATTGAAGATATTATGTATGTTTTGCTATTATGAAGGAAGCCAACTGTTACACTTATAGCATAGG</gDNA_template>
            <first_frame> *  A  K  R  K  W  R  S  S  L  *  C  F  G  K  T  Y  K   : G  V  *  R  R  Q  P  I  C  P  K  G  E  *  I  S  M  *  A  E  V  S  E  E  I  G  F  A  C  L  Y  N  P  L  S  H  C  Q  F  Q   : D  I  Y  Y  S  C  L  L  L  F  I  *  *  D  I  S  D  A  S  S  E  P   : G  T  K  W  A  A  G  Y  V  D  V  P  M  H  P  L  *  K  K  L  P  F  K  P  G  H  S  R  P  Y  K  G  S  F  Q  R  W  L  G  *  R  N  P  P  E  Q  S  I  C  T  I  F  *  V  S  A  T  A  G  F  Y  H  *  L  F  N  S  R  E  T  D  F  F  C  S  N  F  *  H  *  L  S  R  C  S  S  I  A  N  R  *  C  A  E  F  Q  K  P  G  R  A  A  S  I  S  S  F  V  *  Q  R  T  T  N  P  *  A  S  F  E  A  S  *  S  E  D  T  S  *  A  K  G  S  S  Y  Q  R  G  A  R  S  H  F  A  S  S  *  *  C  Y  G  T   : G  K  T  I  K  Q  E  E  H  *  G  G  G  D  P  *  *  K  L  R  S  S  S  R  D  W  N  Y  *  H  R  Y  R  C  V  L  *  G  I  R  *  *  V  Q  K  Y  V  I  L  W  L  K  H  I  C  N  S  F  W  A  I  S  Y  *  L  W  F  R  R  L  F  K  L  L  V  K  C  F  I  R  Y  M  N  S  I  M  L  L  L  F  *  I  I  *  E  *  C  *  T  R  F  F  P  L  S  P  L  L  N  L  C  I  C  D  C  Y  *  G  F  V  C  E  A  L  V  A  L  L  I  E  D  I  M  Y  V  L  L  L  *  R  K  P  T  V  T  L  I  A  *  </first_frame>
            <second_frame>  K  P  K  E  N  G  G  L  L  Y  D  A  L  A  R  P  T  K  :  V  C  K  E  D  N  P  F  A  Q  K  E  N  K  L  A  C  E  L  K  F  L  K  K  L  A  S  L  A  F  I  T  L  F  P  I  V  N  F  K  :  I  F  T  T  V  V  F  F  S  S  F  N  E  I  S  V  M  P  H  Q  N  Q  :  G  Q  N  G  Q  Q  G  M  W  M  Y  Q  C  I  H  C  K  K  N  F  P  S  S  Q  A  I  A  G  H  T  K  G  H  F  R  D  G  W  V  K  G  T  P  Q  S  K  V  F  V  L  F  S  E  Y  Q  Q  Q  Q  G  S  I  T  D  S  S  I  P  E  K  Q  I  F  S  A  A  T  S  D  T  D  L  A  D  A  H  Q  L  Q  I  G  D  V  Q  N  S  R  S  L  V  V  R  P  P  S  P  A  S  S  S  R  E  P  R  I  P  R  H  H  L  R  L  R  D  L  K  I  L  A  R  L  R  A  R  L  T  R  E  E  Q  E  V  I  L  R  L  L  D  S  A  M  E  Q  :  A  K  Q  S  S  K  K  S  T  E  A  E  V  I  P  N  R  N  S  E  A  A  A  V  I  G  T  T  D  T  D  T  D  V  S  S  E  E  S  D  D  E  S  K  N  M  *  S  Y  G  *  S  I  Y  A  I  V  S  G  L  F  L  I  S  Y  G  S  E  D  C  S  N  Y  *  *  S  V  L  L  D  I  *  T  V  *  C  C  C  F  F  R  S  S  K  S  S  V  E  Q  G  S  S  L  Y  P  L  C  *  I  Y  V  Y  V  T  V  T  E  A  L  S  V  R  P  W  L  L  Y  *  L  K  I  L  C  M  F  C  Y  Y  E  G  S  Q  L  L  H  L  *  H  R </second_frame>
            <third_frame>   S  Q  K  K  M  A  V  F  S  M  M  L  W  Q  D  L  Q  R :   C  V  K  K  T  T  H  L  P  K  R  R  I  N  *  H  V  S  *  S  F  *  R  N  W  L  R  L  P  L  *  P  S  F  P  L  S  I  S  R :   Y  L  L  Q  L  S  S  S  L  H  L  M  R  Y  Q  *  C  L  I  R  T  R :   D  K  M  G  S  R  V  C  G  C  T  N  A  S  I  V  K  K  T  S  L  Q  A  R  P  *  Q  A  I  Q  R  V  I  S  E  M  A  G  L  K  E  P  P  R  A  K  Y  L  Y  Y  F  L  S  I  S  N  S  R  V  L  S  L  T  L  Q  F  P  R  N  R  F  F  L  Q  Q  L  L  T  L  T  *  Q  M  L  I  N  C  K  *  V  M  C  R  I  P  E  A  W  S  C  G  L  H  L  Q  L  R  L  A  E  N  H  E  S  L  G  I  I  *  G  F  V  I  *  R  Y  *  L  G  *  G  L  V  L  P  E  R  S  K  K  S  F  C  V  F  L  I  V  L  W  N  R :   Q  N  N  Q  A  R  R  A  L  R  R  R  *  S  L  I  E  T  Q  K  Q  Q  P  *  L  E  L  L  T  Q  I  P  M  C  P  L  R  N  Q  M  M  S  P  K  I  C  D  P  M  V  E  A  Y  M  Q  *  F  L  G  Y  F  L  L  V  M  V  P  K  I  V  Q  I  I  S  E  V  F  Y  *  I  Y  E  Q  Y  N  V  V  A  F  L  D  H  L  R  V  V  L  N  K  V  L  P  F  I  P  S  V  E  F  M  Y  M  *  L  L  L  R  L  C  L  *  G  L  G  C  F  I  N  *  R  Y  Y  V  C  F  A  I  M  K  E  A  N  C  Y  T  Y  S  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0002K14.1" strand="+"/>
                <serials PGL_serial="1" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="8904" stop="8957"/>
                    <exon start="9081" stop="9200"/>
                    <exon start="16621" stop="16686"/>
                    <exon start="17369" stop="17824"/>
                    <exon start="18455" stop="18595"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>834</number_coding_nucleotides>
                  <number_encoded_amino_acids>278</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KPKENGGLLYDALARPTKVCKEDNPFAQKENKLACELKFLKKLASLAFITLFPIVNFKIFTTVVFFSSFNEISVMPHQNQGQNGQQGMWMYQCIHCKKNFPSSQAIAGHTKGHFRDGWVKGTPQSKVFVLFSEYQQQQGSITDSSIPEKQIFSAATSDTDLADAHQLQIGDVQNSRSLVVRPPSPASSSREPRIPRHHLRLRDLKILARLRARLTREEQEVILRLLDSAMEQAKQSSKKSTEAEVIPNRNSEAAAVIGTTDTDTDVSSEESDDESKNM*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="16789" e_stop="17377"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="16789" e_stop="17377" e_length="589"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16789" stop="17377"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E394326" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16790" stop="17360"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E202415" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16790" stop="17206"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E207100" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTAATTAGGGAATGAAAATCCTACATATGACAAGTAAGAAGAATCATTGGAAGGAATGAACAATATATGTCACATCCTAATTCTATTCTGTGATAAGGTTCCCTGGTTCATAAACTCTAAGCTGACTGGTCATATCTCTCTACCAAGAGAAAATAGGGAAAATACCATACTCTTAAGATTCTATAAACCCTTGATTGGTACATATACTTTTTAAGTTTGTAACTCTACCTGCTTTCTTAACCTAGTGATGGAGTTACCTAATGTGTTGAACCCCTGAAGGATCAAGGACCATAAATAGTTGGAACAAGTCATCATTGCCTTTTAAAAGCAAATATTTCAACTATTTATTTATTAGGACAAAATCAATTGAAAAAAAGAAACTTAAGAGTTCCATTATTTATGGTCAAATAGAAAAAGATAAAACCAAAATAACGGAGTTGCAATTGTGTACTCCTTGTTGTTATATCTTTAAGATGCAATGACTTTTTTTATGCCAACTCTGTTTTTAAAAATTACTTGGTTAGAGCTCCTTTATATGTATTCCTCTTCTTCGATTAACATGGAAGTAACAACAATACAGGGACAAAAT</gDNA_template>
            <first_frame> V  I  R  E  *  K  S  Y  I  *  Q  V  R  R  I  I  G  R  N  E  Q  Y  M  S  H  P  N  S  I  L  *  *  G  S  L  V  H  K  L  *  A  D  W  S  Y  L  S  T  K  R  K  *  G  K  Y  H  T  L  K  I  L  *  T  L  D  W  Y  I  Y  F  L  S  L  *  L  Y  L  L  S  *  P  S  D  G  V  T  *  C  V  E  P  L  K  D  Q  G  P  *  I  V  G  T  S  H  H  C  L  L  K  A  N  I  S  T  I  Y  L  L  G  Q  N  Q  L  K  K  R  N  L  R  V  P  L  F  M  V  K  *  K  K  I  K  P  K  *  R  S  C  N  C  V  L  L  V  V  I  S  L  R  C  N  D  F  F  Y  A  N  S  V  F  K  N  Y  L  V  R  A  P  L  Y  V  F  L  F  F  D  *  H  G  S  N  N  N  T  G  T  K  </first_frame>
            <second_frame>  *  L  G  N  E  N  P  T  Y  D  K  *  E  E  S  L  E  G  M  N  N  I  C  H  I  L  I  L  F  C  D  K  V  P  W  F  I  N  S  K  L  T  G  H  I  S  L  P  R  E  N  R  E  N  T  I  L  L  R  F  Y  K  P  L  I  G  T  Y  T  F  *  V  C  N  S  T  C  F  L  N  L  V  M  E  L  P  N  V  L  N  P  *  R  I  K  D  H  K  *  L  E  Q  V  I  I  A  F  *  K  Q  I  F  Q  L  F  I  Y  *  D  K  I  N  *  K  K  E  T  *  E  F  H  Y  L  W  S  N  R  K  R  *  N  Q  N  N  G  V  A  I  V  Y  S  L  L  L  Y  L  *  D  A  M  T  F  F  M  P  T  L  F  L  K  I  T  W  L  E  L  L  Y  M  Y  S  S  S  S  I  N  M  E  V  T  T  I  Q  G  Q  N </second_frame>
            <third_frame>   N  *  G  M  K  I  L  H  M  T  S  K  K  N  H  W  K  E  *  T  I  Y  V  T  S  *  F  Y  S  V  I  R  F  P  G  S  *  T  L  S  *  L  V  I  S  L  Y  Q  E  K  I  G  K  I  P  Y  S  *  D  S  I  N  P  *  L  V  H  I  L  F  K  F  V  T  L  P  A  F  L  T  *  *  W  S  Y  L  M  C  *  T  P  E  G  S  R  T  I  N  S  W  N  K  S  S  L  P  F  K  S  K  Y  F  N  Y  L  F  I  R  T  K  S  I  E  K  K  K  L  K  S  S  I  I  Y  G  Q  I  E  K  D  K  T  K  I  T  E  L  Q  L  C  T  P  C  C  Y  I  F  K  M  Q  *  L  F  L  C  Q  L  C  F  *  K  L  L  G  *  S  S  F  I  C  I  P  L  L  R  L  T  W  K  *  Q  Q  Y  R  D  K   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0002K14.1" strand="+"/>
                <serials PGL_serial="1" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="17058" stop="17270"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>210</number_coding_nucleotides>
                  <number_encoded_amino_acids>70</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TPEGSRTINSWNKSSLPFKSKYFNYLFIRTKSIEKKKLKSSIIYGQIEKDKTKITELQLCTPCCYIFKMQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="-" PGL_start="13520" PGL_stop="13229"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="13520" e_stop="13229"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.925"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.925">
            <gDNA_exon_boundary e_start="13520" e_stop="13229" e_length="292"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="13520" stop="13229"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E412861" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TATACTTTTTTTTGAGAATGATAACCTTTTTTTCCTATTTATCCACAGGTATACTACATCAAAGTAGCCCCCCTCCAAAAGTATTACAAACTAGACTGACTCCATCTGTTCTTTTTGTCACAAATAATCTATAACATCAAAAAGTTCTTCTGACTGTACTAAAACTTTCTGTTTACACCAAAAACAATAAAGAGCTATACAATTCATCTTAAAATTCTGCAAATTGTTCTTCTTGCCCTCAAAACTTCTTTGATTCCTTTCTTTCCACACTGTCCACCATATACAAGCTGGG</gDNA_template>
            <first_frame> Y  T  F  F  *  E  *  *  P  F  F  P  I  Y  P  Q  V  Y  Y  I  K  V  A  P  L  Q  K  Y  Y  K  L  D  *  L  H  L  F  F  L  S  Q  I  I  Y  N  I  K  K  F  F  *  L  Y  *  N  F  L  F  T  P  K  T  I  K  S  Y  T  I  H  L  K  I  L  Q  I  V  L  L  A  L  K  T  S  L  I  P  F  F  P  H  C  P  P  Y  T  S  W  </first_frame>
            <second_frame>  I  L  F  F  E  N  D  N  L  F  F  L  F  I  H  R  Y  T  T  S  K  *  P  P  S  K  S  I  T  N  *  T  D  S  I  C  S  F  C  H  K  *  S  I  T  S  K  S  S  S  D  C  T  K  T  F  C  L  H  Q  K  Q  *  R  A  I  Q  F  I  L  K  F  C  K  L  F  F  L  P  S  K  L  L  *  F  L  S  F  H  T  V  H  H  I  Q  A  G </second_frame>
            <third_frame>   Y  F  F  L  R  M  I  T  F  F  S  Y  L  S  T  G  I  L  H  Q  S  S  P  P  P  K  V  L  Q  T  R  L  T  P  S  V  L  F  V  T  N  N  L  *  H  Q  K  V  L  L  T  V  L  K  L  S  V  Y  T  K  N  N  K  E  L  Y  N  S  S  *  N  S  A  N  C  S  S  C  P  Q  N  F  F  D  S  F  L  S  T  L  S  T  I  Y  K  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02SLe0002K14.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="-" PGL_start="56139" PGL_stop="55661"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="56139" e_stop="55661"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.937"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.937">
            <gDNA_exon_boundary e_start="56139" e_stop="55661" e_length="479"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="56139" stop="55902"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E391780" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="56138" stop="55661"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E246710" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCACGAACCGACACGTAGATTTAGGGGAGCGGAGTGTCACGTACCGACACAAGAGAATTAATGAATATGAGGGAGCGGAGTGTCACGTACCGACACAAGAGAAATAAAGATAATGAATCTTGAAAGATGGTAATATACTCAATCTAATTAACATAATTCCCAAATGAGTATGGTATTGAGGCTTGAGTCCTCATGTGTGAACTTGACGGTAATTGTTAATGATATAGTACTTGTTGTTGCTACATGTTGAGTATCATAGTTGATTTTATGAAATTACTTGGTATATATTGATTTCTATTTTGAGTTGGCCGATGATATCTACTCAGTACCCGTGTTTTGTACTGACCCCTACTTTTATGTTTTCTTCTTGTTTATTTGTGGAGTGCAGCAAACGTGCCGTCATCTTCGACTCAACAGTAACTCTAGCCAGTCTTCATTACTCCGGATATCAGGGTGAGCTAATGCTTCTAGCTTGGACT</gDNA_template>
            <first_frame> S  R  T  D  T  *  I  *  G  S  G  V  S  R  T  D  T  R  E  L  M  N  M  R  E  R  S  V  T  Y  R  H  K  R  N  K  D  N  E  S  *  K  M  V  I  Y  S  I  *  L  T  *  F  P  N  E  Y  G  I  E  A  *  V  L  M  C  E  L  D  G  N  C  *  *  Y  S  T  C  C  C  Y  M  L  S  I  I  V  D  F  M  K  L  L  G  I  Y  *  F  L  F  *  V  G  R  *  Y  L  L  S  T  R  V  L  Y  *  P  L  L  L  C  F  L  L  V  Y  L  W  S  A  A  N  V  P  S  S  S  T  Q  Q  *  L  *  P  V  F  I  T  P  D  I  R  V  S  *  C  F  *  L  G   </first_frame>
            <second_frame>  H  E  P  T  R  R  F  R  G  A  E  C  H  V  P  T  Q  E  N  *  *  I  *  G  S  G  V  S  R  T  D  T  R  E  I  K  I  M  N  L  E  R  W  *  Y  T  Q  S  N  *  H  N  S  Q  M  S  M  V  L  R  L  E  S  S  C  V  N  L  T  V  I  V  N  D  I  V  L  V  V  A  T  C  *  V  S  *  L  I  L  *  N  Y  L  V  Y  I  D  F  Y  F  E  L  A  D  D  I  Y  S  V  P  V  F  C  T  D  P  Y  F  Y  V  F  F  L  F  I  C  G  V  Q  Q  T  C  R  H  L  R  L  N  S  N  S  S  Q  S  S  L  L  R  I  S  G  *  A  N  A  S  S  L  D  </second_frame>
            <third_frame>   T  N  R  H  V  D  L  G  E  R  S  V  T  Y  R  H  K  R  I  N  E  Y  E  G  A  E  C  H  V  P  T  Q  E  K  *  R  *  *  I  L  K  D  G  N  I  L  N  L  I  N  I  I  P  K  *  V  W  Y  *  G  L  S  P  H  V  *  T  *  R  *  L  L  M  I  *  Y  L  L  L  L  H  V  E  Y  H  S  *  F  Y  E  I  T  W  Y  I  L  I  S  I  L  S  W  P  M  I  S  T  Q  Y  P  C  F  V  L  T  P  T  F  M  F  S  S  C  L  F  V  E  C  S  K  R  A  V  I  F  D  S  T  V  T  L  A  S  L  H  Y  S  G  Y  Q  G  E  L  M  L  L  A  W  T </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0002K14.1" strand="-"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="55876" stop="55661"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>216</number_coding_nucleotides>
                  <number_encoded_amino_acids>72</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FYEITWYILISILSWPMISTQYPCFVLTPTFMFSSCLFVECSKRAVIFDSTVTLASLHYSGYQGELMLLAWT</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="+" PGL_start="55813" PGL_stop="63521"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="59377" e_stop="62014"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.947"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.947">
            <gDNA_exon_boundary e_start="59377" e_stop="62014" e_length="2638"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59377" stop="60088"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E379315" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59377" stop="59972"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E375319" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59377" stop="59902"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E204434" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59448" stop="60126"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E368762" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59448" stop="59806"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E240817" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59897" stop="60554"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E355232" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59966" stop="60726"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E355244" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59966" stop="60625"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E351414" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60192" stop="60734"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E355026" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60368" stop="60698"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E352716" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60575" stop="61133"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E244046" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60579" stop="61342"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E214046" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60659" stop="61447"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E356912" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60661" stop="61194"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E353805" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60735" stop="61431"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E356209" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61296" stop="62014"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E356614" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61299" stop="61961"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E352401" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GAATCCCTTGACAAATCGGCGGTAGTAGCTAGCTAACCCAACAAAGCTCCTTATTTCTGACACATTAGTAGGTCTTACCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCACGTGCCCCAAGAAGGACACTGCATCTAGCAAAAACTCACACTTAGAGAACTTGGTATAAAGCTTTTTCTCCCTCAACATTTCCAATACCATTCTCAAATGCTCCTTATGTTCCTCCTTACTTTTAGAGTATATCAGTATGTCATCAATAAATACGATCACAAAGAGATCCAAATATGGCTTAAAAATCCCGTTCATCAAACTCATGAACGCAGCAGGGGCATTCGTAAGACCAAAAGACATCACTACAAATTCGTAATGCCCATACCTAGTTCTAAAAGCGGTCTTTGGCACATCCGTTGCCCGTATTTTCAATTGATGATAGCCGGATCTCAAGTCAATCTTAGAGAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATCAATGCAAGGAAGAGGATACTTGTTCTTTATGGTTACCTTGTTCAACTGCCGGTAGTCTATGCACATCCGAAAACTCCCATCCTTCTTCTTTACAAACAAAACCGGAGCACCCAAGGAGATGCACTTGGTCTAATGAAGCCTTTGCTCAACAACTCTTGAAGTTGTGCTTTTAACTCTCTTAACTCCGCGGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGAGTACCGGGTTCAAGATCAATATAGAAGTCAATATCCCTATCTGGTGGCATACCAGGAAGATCTGCAGGGAACACATCCAGAAACTCACGGACCACCGAAACCGACTCAATCGAAGGTACTTGGGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTAAACACCCTTTACTAACCATTTTCTTAGCACGAAGAAAGGAGATGATACACACCGGATTGGAAGTGTAGTCACCTTCCCACACTAACGGATCTGTCCCAGGCTTGGCTAACGTCACCGTTTTAGCATTACAATCCAAGATCGCAAATTGCGGAGAAAGCCAAGTCATACCCAGAATTACATCAAAATCATCCATTTCTAAGATAACCAAATCTACATAAGTGTTGCTCCCCACGAAGTTCACCAAACAAGACCTATATACCTTTTCAACTACCACAGACTCACCCACCGGTGTAGAAACACGAATAGGCATATCAAGTAATTCACAATGTAAATTTAGACCATTAGCAAATGAGGAAGATACATAAGAAAATGTGGATCCAGGATCAAACAATACATAAGCCATGCAATCACAAACCAGAAGATTACCTGTGATGACAGCATCAGATGCCTCCGCTTCAGACCGCCCAGGGAAAGCGTAACAATGGGCCCTATCGTTTGTCTGTCCATTGCCCCTACCATGTTGTGATGTAGTGGCTCTAGTTTGCCCACCACCTCGGCCATTTTGGTGACCACCATTACCTCGACCACCACGTCCTCCAGAATAACGGCCTCTACCATGACCACCTCTACCTCTAGCCATTGGGGATCTATAACTCTGTTTTGGACAATTCCTCCTAATATGTCCAGTCTCCCCACATCCATAACACTCTCTGGAGTCAAGCATAGGTCTCTCAGAGAAGTGTTGACCGGTCTGAGGTGGACCCCCAACTACAGTCTGTAGTGAAGATTGAATGGGTCGAACTGAGTAACCTCCGGAACCCTGTCCTCTAGAGTAAGAACCATTAAACTCACCTCCCTTTCGAAACCTCTTTGATGTCGATGCCATGGTGAATTCATCTGGCTTCACTCCTTCCACCTCTACCACGAAATCTACCACTTCTTGGAAGGATTTTGCCATAGCCGCTACCTGTAAGGCTGAAATCCACAACTCTGACCTCAACCCCTTCACAGAATGACGAATCCGCTCTTGTGGACTGAAACAAAGTTGAGTGGCATATCTGGATAGTGCACGAAACTTAGCCTCATATGCATTGACCGACATCCTACCTTCTCTAGGCTCAAGAACTCATCCCTTTTCCTATCCCTCAAAGTCCGGGGGATATACTTCTCCATAAACAAGCTAGAGAATGAGGCCCAAGTCATAGGTGGTGCCTTTGTTGGTTGACACTCAACATGTGAATGCCACCACATTTTGGCGTTCCCTTGAAACTGGTAAGTCACAAACTCAACACCAAACCGTTCTACTATACCCATCTTGTGTAATAGCTCATGACAGCCAACCAGAAGATCGTAGGCATCCTCAGATTTAGCACCCTTGAAGACCGGAGGTTTCAATTTCAAGAACTTACTAAAAATTTCATGCTGATCATTTATCATTATAGGCCCTGTAGTCAGACGAGGAAATGTGCCTATTTCCAGTGAGGCATCCATGCGGGGAGCCACAGTAGCCGCATATTGTACCTCCGGAACCTGAGGTGCTGGTGCAGAAAACACTGGAGGTGTCTGGCCTTGATCAGATAACCCGCTAAGATAAGCAAGAACCTGATTGATCATCTCTGGGGTAGGTTGGGGTGGCAATTCCTCATTCTGCACTTGTTCATTCTCCTTATCCTCCCCTTCTCTTACTACTTCCTCAGTCGGTGGAGGAGTCACCGCCCTAGTACCAGATGGGCT</gDNA_template>
            <first_frame> E  S  L  D  K  S  A  V  V  A  S  *  P  N  K  A  P  Y  F  *  H  I  S  R  S  Y  P  I  L  H  C  L  N  L  R  R  I  H  H  H  S  I  L  R  N  H  V  P  Q  E  G  H  C  I  *  Q  K  L  T  L  R  E  L  G  I  K  L  F  L  P  Q  H  F  Q  Y  H  S  Q  M  L  L  M  F  L  L  T  F  R  V  Y  Q  Y  V  I  N  K  Y  D  H  K  E  I  Q  I  W  L  K  N  P  V  H  Q  T  H  E  R  S  R  G  I  R  K  T  K  R  H  H  Y  K  F  V  M  P  I  P  S  S  K  S  G  L  W  H  I  R  C  P  Y  F  Q  L  M  I  A  G  S  Q  V  N  L  R  E  D  T  S  T  L  *  L  I  E  Q  V  I  N  A  R  K  R  I  L  V  L  Y  G  Y  L  V  Q  L  P  V  V  Y  A  H  P  K  T  P  I  L  L  L  Y  K  Q  N  R  S  T  Q  G  D  A  L  G  L  M  K  P  L  L  N  N  S  *  S  C  A  F  N  S  L  N  S  A  G  A  I  L  *  G  G  I  E  M  G  R  V  P  G  S  R  S  I  *  K  S  I  S  L  S  G  G  I  P  G  R  S  A  G  N  T  S  R  N  S  R  T  T  E  T  D  S  I  E  G  T  W  V  V  S  S  L  R  C  A  K  K  A  K  H  P  L  L  T  I  F  L  A  R  R  K  E  M  I  H  T  G  L  E  V  *  S  P  S  H  T  N  G  S  V  P  G  L  A  N  V  T  V  L  A  L  Q  S  K  I  A  N  C  G  E  S  Q  V  I  P  R  I  T  S  K  S  S  I  S  K  I  T  K  S  T  *  V  L  L  P  T  K  F  T  K  Q  D  L  Y  T  F  S  T  T  T  D  S  P  T  G  V  E  T  R  I  G  I  S  S  N  S  Q  C  K  F  R  P  L  A  N  E  E  D  T  *  E  N  V  D  P  G  S  N  N  T  *  A  M  Q  S  Q  T  R  R  L  P  V  M  T  A  S  D  A  S  A  S  D  R  P  G  K  A  *  Q  W  A  L  S  F  V  C  P  L  P  L  P  C  C  D  V  V  A  L  V  C  P  P  P  R  P  F  W  *  P  P  L  P  R  P  P  R  P  P  E  *  R  P  L  P  *  P  P  L  P  L  A  I  G  D  L  *  L  C  F  G  Q  F  L  L  I  C  P  V  S  P  H  P  *  H  S  L  E  S  S  I  G  L  S  E  K  C  *  P  V  *  G  G  P  P  T  T  V  C  S  E  D  *  M  G  R  T  E  *  P  P  E  P  C  P  L  E  *  E  P  L  N  S  P  P  F  R  N  L  F  D  V  D  A  M  V  N  S  S  G  F  T  P  S  T  S  T  T  K  S  T  T  S  W  K  D  F  A  I  A  A  T  C  K  A  E  I  H  N  S  D  L  N  P  F  T  E  *  R  I  R  S  C  G  L  K  Q  S  *  V  A  Y  L  D  S  A  R  N  L  A  S  Y  A  L  T  D  I  L  P  S  L  G  S  R  T  H  P  F  S  Y  P  S  K  S  G  G  Y  T  S  P  *  T  S  *  R  M  R  P  K  S  *  V  V  P  L  L  V  D  T  Q  H  V  N  A  T  T  F  W  R  S  L  E  T  G  K  S  Q  T  Q  H  Q  T  V  L  L  Y  P  S  C  V  I  A  H  D  S  Q  P  E  D  R  R  H  P  Q  I  *  H  P  *  R  P  E  V  S  I  S  R  T  Y  *  K  F  H  A  D  H  L  S  L  *  A  L  *  S  D  E  E  M  C  L  F  P  V  R  H  P  C  G  E  P  Q  *  P  H  I  V  P  P  E  P  E  V  L  V  Q  K  T  L  E  V  S  G  L  D  Q  I  T  R  *  D  K  Q  E  P  D  *  S  S  L  G  *  V  G  V  A  I  P  H  S  A  L  V  H  S  P  Y  P  P  L  L  L  L  L  P  Q  S  V  E  E  S  P  P  *  Y  Q  M  G  </first_frame>
            <second_frame>  N  P  L  T  N  R  R  *  *  L  A  N  P  T  K  L  L  I  S  D  T  L  V  G  L  T  Q  F  F  T  V  S  I  L  E  G  S  T  I  T  P  S  L  E  T  T  C  P  K  K  D  T  A  S  S  K  N  S  H  L  E  N  L  V  *  S  F  F  S  L  N  I  S  N  T  I  L  K  C  S  L  C  S  S  L  L  L  E  Y  I  S  M  S  S  I  N  T  I  T  K  R  S  K  Y  G  L  K  I  P  F  I  K  L  M  N  A  A  G  A  F  V  R  P  K  D  I  T  T  N  S  *  C  P  Y  L  V  L  K  A  V  F  G  T  S  V  A  R  I  F  N  *  *  *  P  D  L  K  S  I  L  E  K  T  Q  A  P  C  N  *  S  N  K  S  S  M  Q  G  R  G  Y  L  F  F  M  V  T  L  F  N  C  R  *  S  M  H  I  R  K  L  P  S  F  F  F  T  N  K  T  G  A  P  K  E  M  H  L  V  *  *  S  L  C  S  T  T  L  E  V  V  L  L  T  L  L  T  P  R  E  P  F  Y  K  G  V  *  K  W  G  E  Y  R  V  Q  D  Q  Y  R  S  Q  Y  P  Y  L  V  A  Y  Q  E  D  L  Q  G  T  H  P  E  T  H  G  P  P  K  P  T  Q  S  K  V  L  G  *  C  H  P  *  D  V  P  R  K  L  N  T  L  Y  *  P  F  S  *  H  E  E  R  R  *  Y  T  P  D  W  K  C  S  H  L  P  T  L  T  D  L  S  Q  A  W  L  T  S  P  F  *  H  Y  N  P  R  S  Q  I  A  E  K  A  K  S  Y  P  E  L  H  Q  N  H  P  F  L  R  *  P  N  L  H  K  C  C  S  P  R  S  S  P  N  K  T  Y  I  P  F  Q  L  P  Q  T  H  P  P  V  *  K  H  E  *  A  Y  Q  V  I  H  N  V  N  L  D  H  *  Q  M  R  K  I  H  K  K  M  W  I  Q  D  Q  T  I  H  K  P  C  N  H  K  P  E  D  Y  L  *  *  Q  H  Q  M  P  P  L  Q  T  A  Q  G  K  R  N  N  G  P  Y  R  L  S  V  H  C  P  Y  H  V  V  M  *  W  L  *  F  A  H  H  L  G  H  F  G  D  H  H  Y  L  D  H  H  V  L  Q  N  N  G  L  Y  H  D  H  L  Y  L  *  P  L  G  I  Y  N  S  V  L  D  N  S  S  *  Y  V  Q  S  P  H  I  H  N  T  L  W  S  Q  A  *  V  S  Q  R  S  V  D  R  S  E  V  D  P  Q  L  Q  S  V  V  K  I  E  W  V  E  L  S  N  L  R  N  P  V  L  *  S  K  N  H  *  T  H  L  P  F  E  T  S  L  M  S  M  P  W  *  I  H  L  A  S  L  L  P  P  L  P  R  N  L  P  L  L  G  R  I  L  P  *  P  L  P  V  R  L  K  S  T  T  L  T  S  T  P  S  Q  N  D  E  S  A  L  V  D  *  N  K  V  E  W  H  I  W  I  V  H  E  T  *  P  H  M  H  *  P  T  S  Y  L  L  *  A  Q  E  L  I  P  F  P  I  P  Q  S  P  G  D  I  L  L  H  K  Q  A  R  E  *  G  P  S  H  R  W  C  L  C  W  L  T  L  N  M  *  M  P  P  H  F  G  V  P  L  K  L  V  S  H  K  L  N  T  K  P  F  Y  Y  T  H  L  V  *  *  L  M  T  A  N  Q  K  I  V  G  I  L  R  F  S  T  L  E  D  R  R  F  Q  F  Q  E  L  T  K  N  F  M  L  I  I  Y  H  Y  R  P  C  S  Q  T  R  K  C  A  Y  F  Q  *  G  I  H  A  G  S  H  S  S  R  I  L  Y  L  R  N  L  R  C  W  C  R  K  H  W  R  C  L  A  L  I  R  *  P  A  K  I  S  K  N  L  I  D  H  L  W  G  R  L  G  W  Q  F  L  I  L  H  L  F  I  L  L  I  L  P  F  S  Y  Y  F  L  S  R  W  R  S  H  R  P  S  T  R  W  A </second_frame>
            <third_frame>   I  P  *  Q  I  G  G  S  S  *  L  T  Q  Q  S  S  L  F  L  T  H  *  *  V  L  P  N  S  S  L  S  Q  S  *  K  D  P  P  S  L  H  P  *  K  P  R  A  P  R  R  T  L  H  L  A  K  T  H  T  *  R  T  W  Y  K  A  F  S  P  S  T  F  P  I  P  F  S  N  A  P  Y  V  P  P  Y  F  *  S  I  S  V  C  H  Q  *  I  R  S  Q  R  D  P  N  M  A  *  K  S  R  S  S  N  S  *  T  Q  Q  G  H  S  *  D  Q  K  T  S  L  Q  I  R  N  A  H  T  *  F  *  K  R  S  L  A  H  P  L  P  V  F  S  I  D  D  S  R  I  S  S  Q  S  *  R  R  H  K  H  L  V  T  D  R  T  S  H  Q  C  K  E  E  D  T  C  S  L  W  L  P  C  S  T  A  G  S  L  C  T  S  E  N  S  H  P  S  S  L  Q  T  K  P  E  H  P  R  R  C  T  W  S  N  E  A  F  A  Q  Q  L  L  K  L  C  F  *  L  S  *  L  R  G  S  H  S  I  R  G  Y  R  N  G  A  S  T  G  F  K  I  N  I  E  V  N  I  P  I  W  W  H  T  R  K  I  C  R  E  H  I  Q  K  L  T  D  H  R  N  R  L  N  R  R  Y  L  G  S  V  I  L  E  M  C  Q  E  S  *  T  P  F  T  N  H  F  L  S  T  K  K  G  D  D  T  H  R  I  G  S  V  V  T  F  P  H  *  R  I  C  P  R  L  G  *  R  H  R  F  S  I  T  I  Q  D  R  K  L  R  R  K  P  S  H  T  Q  N  Y  I  K  I  I  H  F  *  D  N  Q  I  Y  I  S  V  A  P  H  E  V  H  Q  T  R  P  I  Y  L  F  N  Y  H  R  L  T  H  R  C  R  N  T  N  R  H  I  K  *  F  T  M  *  I  *  T  I  S  K  *  G  R  Y  I  R  K  C  G  S  R  I  K  Q  Y  I  S  H  A  I  T  N  Q  K  I  T  C  D  D  S  I  R  C  L  R  F  R  P  P  R  E  S  V  T  M  G  P  I  V  C  L  S  I  A  P  T  M  L  *  C  S  G  S  S  L  P  T  T  S  A  I  L  V  T  T  I  T  S  T  T  T  S  S  R  I  T  A  S  T  M  T  T  S  T  S  S  H  W  G  S  I  T  L  F  W  T  I  P  P  N  M  S  S  L  P  T  S  I  T  L  S  G  V  K  H  R  S  L  R  E  V  L  T  G  L  R  W  T  P  N  Y  S  L  *  *  R  L  N  G  S  N  *  V  T  S  G  T  L  S  S  R  V  R  T  I  K  L  T  S  L  S  K  P  L  *  C  R  C  H  G  E  F  I  W  L  H  S  F  H  L  Y  H  E  I  Y  H  F  L  E  G  F  C  H  S  R  Y  L  *  G  *  N  P  Q  L  *  P  Q  P  L  H  R  M  T  N  P  L  L  W  T  E  T  K  L  S  G  I  S  G  *  C  T  K  L  S  L  I  C  I  D  R  H  P  T  F  S  R  L  K  N  S  S  L  F  L  S  L  K  V  R  G  I  Y  F  S  I  N  K  L  E  N  E  A  Q  V  I  G  G  A  F  V  G  *  H  S  T  C  E  C  H  H  I  L  A  F  P  *  N  W  *  V  T  N  S  T  P  N  R  S  T  I  P  I  L  C  N  S  S  *  Q  P  T  R  R  S  *  A  S  S  D  L  A  P  L  K  T  G  G  F  N  F  K  N  L  L  K  I  S  C  *  S  F  I  I  I  G  P  V  V  R  R  G  N  V  P  I  S  S  E  A  S  M  R  G  A  T  V  A  A  Y  C  T  S  G  T  *  G  A  G  A  E  N  T  G  G  V  W  P  *  S  D  N  P  L  R  *  A  R  T  *  L  I  I  S  G  V  G  W  G  G  N  S  S  F  C  T  C  S  F  S  L  S  S  P  S  L  T  T  S  S  V  G  G  G  V  T  A  L  V  P  D  G   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0002K14.1" strand="+"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="59542" stop="59880"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>336</number_coding_nucleotides>
                  <number_encoded_amino_acids>112</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QKLTLRELGIKLFLPQHFQYHSQMLLMFLLTFRVYQYVINKYDHKEIQIWLKNPVHQTHERSRGIRKTKRHHYKFVMPIPSSKSGLWHIRCPYFQLMIAGSQVNLREDTSTL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0002K14.1" strand="+"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="60807" stop="61061"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>252</number_coding_nucleotides>
                  <number_encoded_amino_acids>84</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CSGSSLPTTSAILVTTITSTTTSSRITASTMTTSTSSHWGSITLFWTIPPNMSSLPTSITLSGVKHRSLREVLTGLRWTPNYSL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0002K14.1" strand="+"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="59859" stop="60071"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>210</number_coding_nucleotides>
                  <number_encoded_amino_acids>70</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RRHKHLVTDRTSHQCKEEDTCSLWLPCSTAGSLCTSENSHPSSLQTKPEHPRRCTWSNEAFAQQLLKLCF*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0002K14.1" strand="+"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="4"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="60148" stop="60348"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>198</number_coding_nucleotides>
                  <number_encoded_amino_acids>66</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KSISLSGGIPGRSAGNTSRNSRTTETDSIEGTWVVSSLRCAKKAKHPLLTIFLARRKEMIHTGLEV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="55813" e_stop="56328"/>
            <exon e_start="63148" e_stop="63521"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.900" acc_prob="0.000" e_score="0.925"/>
          <exon-only e_score="0.930"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.925">
            <gDNA_exon_boundary e_start="55813" e_stop="56328" e_length="516"/>
          </exon>
          <intron i_serial="1" don_prob="0.900" acc_prob="0.000">
            <gDNA_intron_boundary i_start="56329" i_stop="63147" i_length="6819"/>
          </intron>
          <exon e_serial="2" e_score="0.930">
            <gDNA_exon_boundary e_start="63148" e_stop="63521" e_length="374"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55813" stop="56149"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E357033" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55984" stop="56328"/>
              <exon start="63148" stop="63521"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E349726" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ACTGAGTAGATATCATCGGCCAACTCAAAATAGAAATCAATATATACCAAGTAATTTCATAAAATCAACTATGATACTCAACATGTAGCAACAACAAGTACTATATCATTAACAATTACCGTCAAGTTCACACATGAGGACTCAAGCCTCAATACCATACTCATTTGGGAATTATGTTAATTAGATTGAGTATATTACCATCTTTCAAGATTCATTATCTTTATTTCTCTTGTGTCGGTACGTGACACTCCGCTCCCTCATATTCATTAATTCTCTTGTGTCGGTACGTGACACTCCGCTCCCCTAAATCTACGTGTCGGTTCGTGACACCCGATCCCCTAAATCTACGTGTTGGTTCGTGACACCCGATCCCCTAAATCTACGTGTCGGTTTGTGACACCCGATCCCCTAAATCTACGTGTCGGTTTGTGACACCCGATCCCCTAAATCTACGTGTCGGTTCGTGACACCCGATCCTCTAAATCTACGTGTCGGTTCGGGACACCCGATCCCCTA : ATCTACGTGTCGGTTCGTGACACCCGATCCCCTAAATCTACGTGTCGGTTCGTGACACCCGATCCCCTAATCTCCTTCTATAAATTCATCAAGCCTTCTTTCTTACCAAGGCATCATCAATCTCATTATTTTAGTTCATCACGCCTTCTTTTATACCAAGGCCTCATTTTTAACAGAGAGATTAGGGTTTTGCAAGATTTGGGATTCAATAACTTCATCATGCTTATATAATCACAATTATATAATTACATTCATGCAAGCATACAATTAAGCACATAGCAGGGTTTACAATATTATCAATACATATCATTCGCTATTAAGAGTTTACTACGAATATTGTAAGAGAAACCATAACCTACCTCCACCGAAGATTA</gDNA_template>
            <first_frame> T  E  *  I  S  S  A  N  S  K  *  K  S  I  Y  T  K  *  F  H  K  I  N  Y  D  T  Q  H  V  A  T  T  S  T  I  S  L  T  I  T  V  K  F  T  H  E  D  S  S  L  N  T  I  L  I  W  E  L  C  *  L  D  *  V  Y  Y  H  L  S  R  F  I  I  F  I  S  L  V  S  V  R  D  T  P  L  P  H  I  H  *  F  S  C  V  G  T  *  H  S  A  P  L  N  L  R  V  G  S  *  H  P  I  P  *  I  Y  V  L  V  R  D  T  R  S  P  K  S  T  C  R  F  V  T  P  D  P  L  N  L  R  V  G  L  *  H  P  I  P  *  I  Y  V  S  V  R  D  T  R  S  S  K  S  T  C  R  F  G  T  P  D  P  L  :  I  Y  V  S  V  R  D  T  R  S  P  K  S  T  C  R  F  V  T  P  D  P  L  I  S  F  Y  K  F  I  K  P  S  F  L  P  R  H  H  Q  S  H  Y  F  S  S  S  R  L  L  L  Y  Q  G  L  I  F  N  R  E  I  R  V  L  Q  D  L  G  F  N  N  F  I  M  L  I  *  S  Q  L  Y  N  Y  I  H  A  S  I  Q  L  S  T  *  Q  G  L  Q  Y  Y  Q  Y  I  S  F  A  I  K  S  L  L  R  I  L  *  E  K  P  *  P  T  S  T  E  D   </first_frame>
            <second_frame>  L  S  R  Y  H  R  P  T  Q  N  R  N  Q  Y  I  P  S  N  F  I  K  S  T  M  I  L  N  M  *  Q  Q  Q  V  L  Y  H  *  Q  L  P  S  S  S  H  M  R  T  Q  A  S  I  P  Y  S  F  G  N  Y  V  N  *  I  E  Y  I  T  I  F  Q  D  S  L  S  L  F  L  L  C  R  Y  V  T  L  R  S  L  I  F  I  N  S  L  V  S  V  R  D  T  P  L  P  *  I  Y  V  S  V  R  D  T  R  S  P  K  S  T  C  W  F  V  T  P  D  P  L  N  L  R  V  G  L  *  H  P  I  P  *  I  Y  V  S  V  C  D  T  R  S  P  K  S  T  C  R  F  V  T  P  D  P  L  N  L  R  V  G  S  G  H  P  I  P  * :   S  T  C  R  F  V  T  P  D  P  L  N  L  R  V  G  S  *  H  P  I  P  *  S  P  S  I  N  S  S  S  L  L  S  Y  Q  G  I  I  N  L  I  I  L  V  H  H  A  F  F  Y  T  K  A  S  F  L  T  E  R  L  G  F  C  K  I  W  D  S  I  T  S  S  C  L  Y  N  H  N  Y  I  I  T  F  M  Q  A  Y  N  *  A  H  S  R  V  Y  N  I  I  N  T  Y  H  S  L  L  R  V  Y  Y  E  Y  C  K  R  N  H  N  L  P  P  P  K  I  </second_frame>
            <third_frame>   *  V  D  I  I  G  Q  L  K  I  E  I  N  I  Y  Q  V  I  S  *  N  Q  L  *  Y  S  T  C  S  N  N  K  Y  Y  I  I  N  N  Y  R  Q  V  H  T  *  G  L  K  P  Q  Y  H  T  H  L  G  I  M  L  I  R  L  S  I  L  P  S  F  K  I  H  Y  L  Y  F  S  C  V  G  T  *  H  S  A  P  S  Y  S  L  I  L  L  C  R  Y  V  T  L  R  S  P  K  S  T  C  R  F  V  T  P  D  P  L  N  L  R  V  G  S  *  H  P  I  P  *  I  Y  V  S  V  C  D  T  R  S  P  K  S  T  C  R  F  V  T  P  D  P  L  N  L  R  V  G  S  *  H  P  I  L  *  I  Y  V  S  V  R  D  T  R  S  P   : N  L  R  V  G  S  *  H  P  I  P  *  I  Y  V  S  V  R  D  T  R  S  P  N  L  L  L  *  I  H  Q  A  F  F  L  T  K  A  S  S  I  S  L  F  *  F  I  T  P  S  F  I  P  R  P  H  F  *  Q  R  D  *  G  F  A  R  F  G  I  Q  *  L  H  H  A  Y  I  I  T  I  I  *  L  H  S  C  K  H  T  I  K  H  I  A  G  F  T  I  L  S  I  H  I  I  R  Y  *  E  F  T  T  N  I  V  R  E  T  I  T  Y  L  H  R  R  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0002K14.1" strand="+"/>
                <serials PGL_serial="4" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="56260" stop="56328"/>
                    <exon start="63148" stop="63378"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>297</number_coding_nucleotides>
                  <number_encoded_amino_acids>99</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IYVSVRDTRSSKSTCRFGTPDPLIYVSVRDTRSPKSTCRFVTPDPLISFYKFIKPSFLPRHHQSHYFSSSRLLLYQGLIFNREIRVLQDLGFNNFIMLI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="-" PGL_start="56633" PGL_stop="56230"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="56633" e_stop="56230"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.921"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.921">
            <gDNA_exon_boundary e_start="56633" e_stop="56230" e_length="404"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="56633" stop="56230"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E357559" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TAATCTTCGGTGGAGGTAGGTTATGGTTTCTCTTACGATATTCGTAGTAAACTCTTAATAGCGAATGATATGTATTGATAATATTGTAAACCCTGCTATGTTCTTAATTGTATGCTTGCATGAATGTAATTATATAATTGTAATTATATAAGCATGATGAAGTTATTGAATCCCAAATCTTGCAAAACCCTAATCTCTTTGTTAATAATGAGGCCTTGGTATAAAAGAAGTCGTGATGAACTAAAATAATGAGATTGATGATGCCTTGGTAAGAAAGAAGGCTTGATGAATTGATAGAAGGAGATTAGGGGATCGGGTGTCCCGAACCGACACGTAGATTTAGAGGATCGGGTGTCACGAACCGACACGTAGATTTAGGGGATCGGGTGTCACAAACCGACACG</gDNA_template>
            <first_frame> *  S  S  V  E  V  G  Y  G  F  S  Y  D  I  R  S  K  L  L  I  A  N  D  M  Y  *  *  Y  C  K  P  C  Y  V  L  N  C  M  L  A  *  M  *  L  Y  N  C  N  Y  I  S  M  M  K  L  L  N  P  K  S  C  K  T  L  I  S  L  L  I  M  R  P  W  Y  K  R  S  R  D  E  L  K  *  *  D  *  *  C  L  G  K  K  E  G  L  M  N  *  *  K  E  I  R  G  S  G  V  P  N  R  H  V  D  L  E  D  R  V  S  R  T  D  T  *  I  *  G  I  G  C  H  K  P  T   </first_frame>
            <second_frame>  N  L  R  W  R  *  V  M  V  S  L  T  I  F  V  V  N  S  *  *  R  M  I  C  I  D  N  I  V  N  P  A  M  F  L  I  V  C  L  H  E  C  N  Y  I  I  V  I  I  *  A  *  *  S  Y  *  I  P  N  L  A  K  P  *  S  L  C  *  *  *  G  L  G  I  K  E  V  V  M  N  *  N  N  E  I  D  D  A  L  V  R  K  K  A  *  *  I  D  R  R  R  L  G  D  R  V  S  R  T  D  T  *  I  *  R  I  G  C  H  E  P  T  R  R  F  R  G  S  G  V  T  N  R  H  </second_frame>
            <third_frame>   I  F  G  G  G  R  L  W  F  L  L  R  Y  S  *  *  T  L  N  S  E  *  Y  V  L  I  I  L  *  T  L  L  C  S  *  L  Y  A  C  M  N  V  I  I  *  L  *  L  Y  K  H  D  E  V  I  E  S  Q  I  L  Q  N  P  N  L  F  V  N  N  E  A  L  V  *  K  K  S  *  *  T  K  I  M  R  L  M  M  P  W  *  E  R  R  L  D  E  L  I  E  G  D  *  G  I  G  C  P  E  P  T  R  R  F  R  G  S  G  V  T  N  R  H  V  D  L  G  D  R  V  S  Q  T  D  T </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02SLe0002K14.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="-" PGL_start="61392" PGL_stop="59949"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="61392" e_stop="61220"/>
            <exon e_start="60475" e_stop="59949"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.936"/>
          <exon-only e_score="0.913"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.936">
            <gDNA_exon_boundary e_start="61392" e_stop="61220" e_length="173"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="61219" i_stop="60476" i_length="744"/>
          </intron>
          <exon e_serial="2" e_score="0.913">
            <gDNA_exon_boundary e_start="60475" e_stop="59949" e_length="527"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61392" stop="61220"/>
              <exon start="60475" stop="59949"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E353359" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGAAGGTAGGATGTCGGTCAATGCATATGAGGCTAAGTTTCGTGCACTATCCAGATATGCCACTCAACTTTGTTTCAGTCCACAAGAGCGGATTCGTCATTCTGTGAAGGGGTTGAGGTCAGAGTTGTGGATTTCAGCCTTACAGGTAGCGGCTATGGCAAAATCCTTCCAAG : AAATGGATGATTTTGATGTAATTCTGGGTATGACTTGGCTTTCTCCGCAATTTGCGATCTTGGATTGTAATGCTAAAACGGTGACGTTAGCCAAGCCTGGGACAGATCCGTTAGTGTGGGAAGGTGACTACACTTCCAATCCGGTGTGTATCATCTCCTTTCTTCGTGCTAAGAAAATGGTTAGTAAAGGGTGTTTAGCTTTCTTGGCACATCTCAAGGATGACACTACCCAAGTACCTTCGATTGAGTCGGTTTCGGTGGTCCGTGAGTTTCTGGATGTGTTCCCTGCAGATCTTCCTGGTATGCCACCAGATAGGGATATTGACTTCTATATTGATCTTGAACCCGGTACTCGCCCCATTTCTATACCCCCTTATAGAATGGCTCCCGCGGAGTTAAGAGAGTTAAAAGCACAACTTCAAGAGTTGTTGAGCAAAGGCTTCATTAGACCAAGTGCATCTCCTTGGGTGCTCCGGTTTTGTTTGTAAAGAAGAAGGATGGGAGTTTTCGGATGTGCATAGACTACC</gDNA_template>
            <first_frame> R  R  *  D  V  G  Q  C  I  *  G  *  V  S  C  T  I  Q  I  C  H  S  T  L  F  Q  S  T  R  A  D  S  S  F  C  E  G  V  E  V  R  V  V  D  F  S  L  T  G  S  G  Y  G  K  I  L  P  R :   N  G  *  F  *  C  N  S  G  Y  D  L  A  F  S  A  I  C  D  L  G  L  *  C  *  N  G  D  V  S  Q  A  W  D  R  S  V  S  V  G  R  *  L  H  F  Q  S  G  V  Y  H  L  L  S  S  C  *  E  N  G  *  *  R  V  F  S  F  L  G  T  S  Q  G  *  H  Y  P  S  T  F  D  *  V  G  F  G  G  P  *  V  S  G  C  V  P  C  R  S  S  W  Y  A  T  R  *  G  Y  *  L  L  Y  *  S  *  T  R  Y  S  P  H  F  Y  T  P  L  *  N  G  S  R  G  V  K  R  V  K  S  T  T  S  R  V  V  E  Q  R  L  H  *  T  K  C  I  S  L  G  A  P  V  L  F  V  K  K  K  D  G  S  F  R  M  C  I  D  Y  </first_frame>
            <second_frame>  E  G  R  M  S  V  N  A  Y  E  A  K  F  R  A  L  S  R  Y  A  T  Q  L  C  F  S  P  Q  E  R  I  R  H  S  V  K  G  L  R  S  E  L  W  I  S  A  L  Q  V  A  A  M  A  K  S  F  Q   : E  M  D  D  F  D  V  I  L  G  M  T  W  L  S  P  Q  F  A  I  L  D  C  N  A  K  T  V  T  L  A  K  P  G  T  D  P  L  V  W  E  G  D  Y  T  S  N  P  V  C  I  I  S  F  L  R  A  K  K  M  V  S  K  G  C  L  A  F  L  A  H  L  K  D  D  T  T  Q  V  P  S  I  E  S  V  S  V  V  R  E  F  L  D  V  F  P  A  D  L  P  G  M  P  P  D  R  D  I  D  F  Y  I  D  L  E  P  G  T  R  P  I  S  I  P  P  Y  R  M  A  P  A  E  L  R  E  L  K  A  Q  L  Q  E  L  L  S  K  G  F  I  R  P  S  A  S  P  W  V  L  R  F  C  L  *  R  R  R  M  G  V  F  G  C  A  *  T  T </second_frame>
            <third_frame>   K  V  G  C  R  S  M  H  M  R  L  S  F  V  H  Y  P  D  M  P  L  N  F  V  S  V  H  K  S  G  F  V  I  L  *  R  G  *  G  Q  S  C  G  F  Q  P  Y  R  *  R  L  W  Q  N  P  S  K  :  K  W  M  I  L  M  *  F  W  V  *  L  G  F  L  R  N  L  R  S  W  I  V  M  L  K  R  *  R  *  P  S  L  G  Q  I  R  *  C  G  K  V  T  T  L  P  I  R  C  V  S  S  P  F  F  V  L  R  K  W  L  V  K  G  V  *  L  S  W  H  I  S  R  M  T  L  P  K  Y  L  R  L  S  R  F  R  W  S  V  S  F  W  M  C  S  L  Q  I  F  L  V  C  H  Q  I  G  I  L  T  S  I  L  I  L  N  P  V  L  A  P  F  L  Y  P  L  I  E  W  L  P  R  S  *  E  S  *  K  H  N  F  K  S  C  *  A  K  A  S  L  D  Q  V  H  L  L  G  C  S  G  F  V  C  K  E  E  G  W  E  F  S  D  V  H  R  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0002K14.1" strand="-"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="61391" stop="61220"/>
                    <exon start="60475" stop="59988"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>657</number_coding_nucleotides>
                  <number_encoded_amino_acids>219</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EGRMSVNAYEAKFRALSRYATQLCFSPQERIRHSVKGLRSELWISALQVAAMAKSFQEMDDFDVILGMTWLSPQFAILDCNAKTVTLAKPGTDPLVWEGDYTSNPVCIISFLRAKKMVSKGCLAFLAHLKDDTTQVPSIESVSVVREFLDVFPADLPGMPPDRDIDFYIDLEPGTRPISIPPYRMAPAELRELKAQLQELLSKGFIRPSASPWVLRFCL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="-" PGL_start="62018" PGL_stop="61465"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="62018" e_stop="61465"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.930"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.930">
            <gDNA_exon_boundary e_start="62018" e_stop="61465" e_length="554"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62018" stop="61465"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E329287" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ACCTAGCCCATCTGGTACTAGGGCGGTGACTCCTCCACCGACTGAGGAAGTAGTAAGAGAAGGGGAGGATAAGGAGAATGAACAAGTGCAGAATGAGGAATTGCCACCCCAACCTACCCCAGAGATGATCAATCAGGTTCTTGCTTATCTTAGCGGGTTATCTGATCAAGGCCAGACACCTCCAGTGTTTTCTGCACCAGCACCTCAGGTTCCGGAGGTACAATATGCGGCTACTGTGGCTCCCCGCATGGATGCCTCACTGGAAATAGGCACATTTCCTCGTCTGACTACAGGGCCTATAATGATAAATGATCAGCATGAAATTTTTAGTAAGTTCTTGAAATTGAAACCTCCGGTCTTCAAGGGTGCTAAATCTGAGGATGCCTACGATCTTCTGGTTGGCTGTCATGAGCTATTACACAAGATGGGTATAGTAGAACGGTTTGGTGTTGAGTTTGTGACTTACCAGTTTCAAGGGAACGCCAAAATGTGGTGGCATTCACATGTTGAGTGTCAACCAACAAAGGCACCACCTATGACTTGGGCCTCATTCT</gDNA_template>
            <first_frame> T  *  P  I  W  Y  *  G  G  D  S  S  T  D  *  G  S  S  K  R  R  G  G  *  G  E  *  T  S  A  E  *  G  I  A  T  P  T  Y  P  R  D  D  Q  S  G  S  C  L  S  *  R  V  I  *  S  R  P  D  T  S  S  V  F  C  T  S  T  S  G  S  G  G  T  I  C  G  Y  C  G  S  P  H  G  C  L  T  G  N  R  H  I  S  S  S  D  Y  R  A  Y  N  D  K  *  S  A  *  N  F  *  *  V  L  E  I  E  T  S  G  L  Q  G  C  *  I  *  G  C  L  R  S  S  G  W  L  S  *  A  I  T  Q  D  G  Y  S  R  T  V  W  C  *  V  C  D  L  P  V  S  R  E  R  Q  N  V  V  A  F  T  C  *  V  S  T  N  K  G  T  T  Y  D  L  G  L  I   </first_frame>
            <second_frame>  P  S  P  S  G  T  R  A  V  T  P  P  P  T  E  E  V  V  R  E  G  E  D  K  E  N  E  Q  V  Q  N  E  E  L  P  P  Q  P  T  P  E  M  I  N  Q  V  L  A  Y  L  S  G  L  S  D  Q  G  Q  T  P  P  V  F  S  A  P  A  P  Q  V  P  E  V  Q  Y  A  A  T  V  A  P  R  M  D  A  S  L  E  I  G  T  F  P  R  L  T  T  G  P  I  M  I  N  D  Q  H  E  I  F  S  K  F  L  K  L  K  P  P  V  F  K  G  A  K  S  E  D  A  Y  D  L  L  V  G  C  H  E  L  L  H  K  M  G  I  V  E  R  F  G  V  E  F  V  T  Y  Q  F  Q  G  N  A  K  M  W  W  H  S  H  V  E  C  Q  P  T  K  A  P  P  M  T  W  A  S  F  </second_frame>
            <third_frame>   L  A  H  L  V  L  G  R  *  L  L  H  R  L  R  K  *  *  E  K  G  R  I  R  R  M  N  K  C  R  M  R  N  C  H  P  N  L  P  Q  R  *  S  I  R  F  L  L  I  L  A  G  Y  L  I  K  A  R  H  L  Q  C  F  L  H  Q  H  L  R  F  R  R  Y  N  M  R  L  L  W  L  P  A  W  M  P  H  W  K  *  A  H  F  L  V  *  L  Q  G  L  *  *  *  M  I  S  M  K  F  L  V  S  S  *  N  *  N  L  R  S  S  R  V  L  N  L  R  M  P  T  I  F  W  L  A  V  M  S  Y  Y  T  R  W  V  *  *  N  G  L  V  L  S  L  *  L  T  S  F  K  G  T  P  K  C  G  G  I  H  M  L  S  V  N  Q  Q  R  H  H  L  *  L  G  P  H  S </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0002K14.1" strand="-"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="62017" stop="61466"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>552</number_coding_nucleotides>
                  <number_encoded_amino_acids>184</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PSPSGTRAVTPPPTEEVVREGEDKENEQVQNEELPPQPTPEMINQVLAYLSGLSDQGQTPPVFSAPAPQVPEVQYAATVAPRMDASLEIGTFPRLTTGPIMINDQHEIFSKFLKLKPPVFKGAKSEDAYDLLVGCHELLHKMGIVERFGVEFVTYQFQGNAKMWWHSHVECQPTKAPPMTWASF</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="-" PGL_start="63166" PGL_stop="62689"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="63166" e_stop="62689"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.937"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.937">
            <gDNA_exon_boundary e_start="63166" e_stop="62689" e_length="478"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63166" stop="62689"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E246710" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CACGAACCGACACGTAGATTTAGGGGAGCGGAGTGTCACGTACCGACACAAGAGGATTAATGAATATGAGGGAGCGGAGTGTCACGTACCGACACAAGAGAAATAAAGATAATGAATCTTGAAAGATGGTAATATACTCAATCTAATTAACATAATTCCCAAATGAGTATGGTATTGAGGCTTGAGTCCTCATGTGTGAACTTGACGATAATTGTTAATGATATAGTACTTGCTGTTGCTACATGTTGAGTATCATAGTTGATTTTATGATATTACTTGGTATATATTGATTTCTATTTTGAGTTGGCCGATGATATCTACTCAGTACCCGTGTTTTGTACTGACCCCTACTTTTATGTTTTCTTCTTGTTTATTTGTGGAGCGCAGCAAACGTGCCGTCATCTTCGACTCAACAGTAACTCTAGCCAGTCTTCATTACTTCGGATATCAGGGTGAGCTAATGCTTCTAGCTTGGACT</gDNA_template>
            <first_frame> H  E  P  T  R  R  F  R  G  A  E  C  H  V  P  T  Q  E  D  *  *  I  *  G  S  G  V  S  R  T  D  T  R  E  I  K  I  M  N  L  E  R  W  *  Y  T  Q  S  N  *  H  N  S  Q  M  S  M  V  L  R  L  E  S  S  C  V  N  L  T  I  I  V  N  D  I  V  L  A  V  A  T  C  *  V  S  *  L  I  L  *  Y  Y  L  V  Y  I  D  F  Y  F  E  L  A  D  D  I  Y  S  V  P  V  F  C  T  D  P  Y  F  Y  V  F  F  L  F  I  C  G  A  Q  Q  T  C  R  H  L  R  L  N  S  N  S  S  Q  S  S  L  L  R  I  S  G  *  A  N  A  S  S  L  D  </first_frame>
            <second_frame>  T  N  R  H  V  D  L  G  E  R  S  V  T  Y  R  H  K  R  I  N  E  Y  E  G  A  E  C  H  V  P  T  Q  E  K  *  R  *  *  I  L  K  D  G  N  I  L  N  L  I  N  I  I  P  K  *  V  W  Y  *  G  L  S  P  H  V  *  T  *  R  *  L  L  M  I  *  Y  L  L  L  L  H  V  E  Y  H  S  *  F  Y  D  I  T  W  Y  I  L  I  S  I  L  S  W  P  M  I  S  T  Q  Y  P  C  F  V  L  T  P  T  F  M  F  S  S  C  L  F  V  E  R  S  K  R  A  V  I  F  D  S  T  V  T  L  A  S  L  H  Y  F  G  Y  Q  G  E  L  M  L  L  A  W  T </second_frame>
            <third_frame>   R  T  D  T  *  I  *  G  S  G  V  S  R  T  D  T  R  G  L  M  N  M  R  E  R  S  V  T  Y  R  H  K  R  N  K  D  N  E  S  *  K  M  V  I  Y  S  I  *  L  T  *  F  P  N  E  Y  G  I  E  A  *  V  L  M  C  E  L  D  D  N  C  *  *  Y  S  T  C  C  C  Y  M  L  S  I  I  V  D  F  M  I  L  L  G  I  Y  *  F  L  F  *  V  G  R  *  Y  L  L  S  T  R  V  L  Y  *  P  L  L  L  C  F  L  L  V  Y  L  W  S  A  A  N  V  P  S  S  S  T  Q  Q  *  L  *  P  V  F  I  T  S  D  I  R  V  S  *  C  F  *  L  G   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0002K14.1" strand="-"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="62904" stop="62689"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>216</number_coding_nucleotides>
                  <number_encoded_amino_acids>72</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FYDITWYILISILSWPMISTQYPCFVLTPTFMFSSCLFVERSKRAVIFDSTVTLASLHYFGYQGELMLLAWT</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="+" PGL_start="127577" PGL_stop="131107"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="127577" e_stop="127660"/>
            <exon e_start="129523" e_stop="129620"/>
            <exon e_start="129704" e_stop="129735"/>
            <exon e_start="130502" e_stop="130565"/>
            <exon e_start="130645" e_stop="131107"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.992" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.789" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.696" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="127577" e_stop="127660" e_length="84"/>
          </exon>
          <intron i_serial="1" don_prob="0.992" acc_prob="0.992">
            <gDNA_intron_boundary i_start="127661" i_stop="129522" i_length="1862"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="129523" e_stop="129620" e_length="98"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.789">
            <gDNA_intron_boundary i_start="129621" i_stop="129703" i_length="83"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="129704" e_stop="129735" e_length="32"/>
          </exon>
          <intron i_serial="3" don_prob="0.998" acc_prob="0.696">
            <gDNA_intron_boundary i_start="129736" i_stop="130501" i_length="766"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="130502" e_stop="130565" e_length="64"/>
          </exon>
          <intron i_serial="4" don_prob="0.996" acc_prob="1.000">
            <gDNA_intron_boundary i_start="130566" i_stop="130644" i_length="79"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="130645" e_stop="131107" e_length="463"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="127577" stop="127660"/>
              <exon start="129523" stop="129620"/>
              <exon start="129704" stop="129735"/>
              <exon start="130502" stop="130565"/>
              <exon start="130645" stop="131107"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E715123" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="129550" stop="129620"/>
              <exon start="129704" stop="129735"/>
              <exon start="130502" stop="130565"/>
              <exon start="130645" stop="131107"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E452307" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="129550" stop="129620"/>
              <exon start="129704" stop="129735"/>
              <exon start="130502" stop="130565"/>
              <exon start="130645" stop="131079"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E424390" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="129550" stop="129620"/>
              <exon start="129704" stop="129735"/>
              <exon start="130502" stop="130565"/>
              <exon start="130645" stop="131069"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E424391" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTGATATTGGTATGTGGTCATCATTGCCAATCTTGCCATCTCCTTGGATTATGGGCCCAAGATACTTGAAGCTTCCTCTCTTAG : TCTCAATTGGACAAACAACAGATGTACAAAAGGGAGCTTCTTTGTTTAATCGAGCTTGCATTGGATGTCATTATGAAGGTGGAAATATAATCCAGCCT : GGTGCGACACTCTTCTTGAAGGATCTACAAAG : AAATGGAGTTGACACGGAAGAGGAAATCTACCGCGTCACTTACAATGGCAAAGGGAGAATGCCA : GGGTTTGGTCAGAATTGTACACCAAGGGGTCAATGCACTTTTGGTCCTCGATTACAAGACGATGAAATTAAACTCTTAGCTGAGTTTGTGAAGTCTCAAGCTGATCAAGATTGGCCTAAAATCGAAAACAGTGGAGATTGAAAATAACTATTAGTACTTCACAATTGTTCAAAATGTGCATATCATGTTTCTCAGTTGCTTTGTCTTTTCATCTCTCTCGTCCCATTCGGATGTTTACTAAAGGCGATTCAGAGAGAAATAGTCAGTCATTTCACTAGAGAGTTACCTGTTGATGACATGAAGGGTAGCTTCACTTGTTCTGTGTAAAGTTGACCTTATTTACTTCCCAACAATAGTTTCTATTAGTTTTAGATTATAACACATGCTGGACCTGTTAGAGCACATGCTCACATGCATCTGTTATTGTAAACTTTTTTTAATATAAAAACTATAGTTTGACTTT</gDNA_template>
            <first_frame> L  I  L  V  C  G  H  H  C  Q  S  C  H  L  L  G  L  W  A  Q  D  T  *  S  F  L  S  *  :  S  Q  L  D  K  Q  Q  M  Y  K  R  E  L  L  C  L  I  E  L  A  L  D  V  I  M  K  V  E  I  *  S  S  L :   V  R  H  S  S  *  R  I  Y  K   : E  M  E  L  T  R  K  R  K  S  T  A  S  L  T  M  A  K  G  E  C  Q :   G  L  V  R  I  V  H  Q  G  V  N  A  L  L  V  L  D  Y  K  T  M  K  L  N  S  *  L  S  L  *  S  L  K  L  I  K  I  G  L  K  S  K  T  V  E  I  E  N  N  Y  *  Y  F  T  I  V  Q  N  V  H  I  M  F  L  S  C  F  V  F  S  S  L  S  S  H  S  D  V  Y  *  R  R  F  R  E  K  *  S  V  I  S  L  E  S  Y  L  L  M  T  *  R  V  A  S  L  V  L  C  K  V  D  L  I  Y  F  P  T  I  V  S  I  S  F  R  L  *  H  M  L  D  L  L  E  H  M  L  T  C  I  C  Y  C  K  L  F  L  I  *  K  L  *  F  D  F </first_frame>
            <second_frame>  *  Y  W  Y  V  V  I  I  A  N  L  A  I  S  L  D  Y  G  P  K  I  L  E  A  S  S  L  S :   L  N  W  T  N  N  R  C  T  K  G  S  F  F  V  *  S  S  L  H  W  M  S  L  *  R  W  K  Y  N  P  A   : W  C  D  T  L  L  E  G  S  T  K  :  K  W  S  *  H  G  R  G  N  L  P  R  H  L  Q  W  Q  R  E  N  A   : R  V  W  S  E  L  Y  T  K  G  S  M  H  F  W  S  S  I  T  R  R  *  N  *  T  L  S  *  V  C  E  V  S  S  *  S  R  L  A  *  N  R  K  Q  W  R  L  K  I  T  I  S  T  S  Q  L  F  K  M  C  I  S  C  F  S  V  A  L  S  F  H  L  S  R  P  I  R  M  F  T  K  G  D  S  E  R  N  S  Q  S  F  H  *  R  V  T  C  *  *  H  E  G  *  L  H  L  F  C  V  K  L  T  L  F  T  S  Q  Q  *  F  L  L  V  L  D  Y  N  T  C  W  T  C  *  S  T  C  S  H  A  S  V  I  V  N  F  F  *  Y  K  N  Y  S  L  T   </second_frame>
            <third_frame>   D  I  G  M  W  S  S  L  P  I  L  P  S  P  W  I  M  G  P  R  Y  L  K  L  P  L  L   : V  S  I  G  Q  T  T  D  V  Q  K  G  A  S  L  F  N  R  A  C  I  G  C  H  Y  E  G  G  N  I  I  Q  P  :  G  A  T  L  F  L  K  D  L  Q  R :   N  G  V  D  T  E  E  E  I  Y  R  V  T  Y  N  G  K  G  R  M  P  :  G  F  G  Q  N  C  T  P  R  G  Q  C  T  F  G  P  R  L  Q  D  D  E  I  K  L  L  A  E  F  V  K  S  Q  A  D  Q  D  W  P  K  I  E  N  S  G  D  *  K  *  L  L  V  L  H  N  C  S  K  C  A  Y  H  V  S  Q  L  L  C  L  F  I  S  L  V  P  F  G  C  L  L  K  A  I  Q  R  E  I  V  S  H  F  T  R  E  L  P  V  D  D  M  K  G  S  F  T  C  S  V  *  S  *  P  Y  L  L  P  N  N  S  F  Y  *  F  *  I  I  T  H  A  G  P  V  R  A  H  A  H  M  H  L  L  L  *  T  F  F  N  I  K  T  I  V  *  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0002K14.1" strand="+"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="127579" stop="127660"/>
                    <exon start="129523" stop="129620"/>
                    <exon start="129704" stop="129735"/>
                    <exon start="130502" stop="130565"/>
                    <exon start="130645" stop="130785"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>414</number_coding_nucleotides>
                  <number_encoded_amino_acids>138</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DIGMWSSLPILPSPWIMGPRYLKLPLLVSIGQTTDVQKGASLFNRACIGCHYEGGNIIQPGATLFLKDLQRNGVDTEEEIYRVTYNGKGRMPGFGQNCTPRGQCTFGPRLQDDEIKLLAEFVKSQADQDWPKIENSGD*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 200 chains have been computed
$ 
$ memory statistics:
$ 91352 bytes spliced alignments in total
$ 41 spliced alignments have been stored
$ 2228 bytes was the average size of a spliced alignment
$ 15776 bytes predicted gene locations in total
$ 9 predicted gene locations have been stored
$ 1752 bytes was the average size of a predicted gene location
$ 3 megabytes was the average size of the backtrace matrix
$ 258 backtrace matrices have been allocated
$ 
$ date finished: 2009-12-01 10:44:59
-->
