<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-12-01 10:57:49"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C02SLe0031D11-98q2S/GenomeThreader_SGN_U_tomato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C02SLe0031D11-98q2S/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0031D11-98q2S/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U563383" ref_strand="+" ref_description="SGN-U563383 Tomato 200607#2 [4 ESTs aligned] ">
      <seq>gggttattgccaagcaatccaaggagaagcatattgagaagcatgataatgaatctctgagtcagaaactggataacggggatgcagtaactaagaaaaaaagtaagggcgagcagagtgaattgccacagaatggaacaagaatggtgcttgatggagtgaggcatccagtgccgtatcacaaaaaagagcaaaagggaggcgatgaatatcagcagacttctgcaaaccatttgaaacttgtacacaatgttgtcaatggtgcaactaccaagcagcacaaggtgaaagagaagcgtattgagaagcatgataatgaatctctgagtcagaaactggataacggggatgcagtaactaagaaaaaaagtaagagcgagcagagtgaattgccacaaaatggaacaagaatggtgcttgaaggagtgaggcatccagcgccgtctcacaaaaaagagcaaaagggaggtgataaatatcagcatacttctgcaaaccatttgaaacttatacacaatgttgtcaatgttgcaactaccaagcagcacaaggtgaaagagaagcgtgattccccacaagaacagaaggaagaaaagattgagtcgttacatagcagagaactggatttgaagggtggtaagttggcttcggatgagaagagtaaaccaaaagctggaaagctaacactttcagatcttttcaggaggtgagtttaactgtatcttgtaaaatcatatcctcttcaaaagaggagcaagagctgtgtcttaccttgtttaccccttcttttttaccataggagtgtctagatctcatgtacatggcaatagaatgagccgtaattgccatttttttgactgtgacatggtaattatttttttttatttcatatcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0031D11-98q2S/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0031D11.1" temp_strand="+" temp_description="C02SLe0031D11.1  AC215451.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0031D11 sequenced_by:kribb upload_account_name:korea">
        <position start="9044" stop="10534"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="9343" g_stop="10235" g_length="893"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="894" r_length="894" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0031D11.1" gen_strand="+" ref_id="SGN-U563383" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>893</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0031D11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U563383" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="9343" e_stop="10235"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGGTTATTGCCAAGCAATCCAAGGAGAAGCATATTGAGAAGCATGATAATGAATCTCTGAGTCAGAAACTGGATAACGGGGATGCAGTAACTAAGAAAAAAAGTAAGGGCGAGCAGAGTGAATTGCCACAGAATGGAACAAGAATGGTGCTTGATGGAGTGAGGCATCCAGTGCCGTATCACAAAAAAGAGCAAAAGGGAGGCGATGAATATCAGCAGACTTCTGCAAACCATTTGAAACTTGTACACAATGTTGTCAATGGTGCAACTACCAAGCAGCACAAGGTGAAAGAGAAGCGTATTGAGAAGCATGATAATGAATCTCTGAGTCAGAAACTGGATAACGGGGATGCAGTAACTAAGAAAAAAAGTAAGAGCGAGCAGAGTGAATTGCCACAAAATGGAACAAGAATGGTGCTTGAAGGAGTGAGGCATCCAGCGCCGTCTCACAAAAAAGAGCAAAAGGGAGGTGATAAATATCAGCATACTTCTGCAAACCATTTGAAACTTATACACAATGTTGTCAATGTTGCAACTACCAAGCAGCACAAGGTGAAAGAGAAGCGTGATTCCCCACAAGAACAGAAGGAAGAAAAGATTGAGTCGTTACATAGCAGAGAACTGGATTTGAAGGGTGGTAAGTTGGCTTCGGATGAGAAGAGTAAACCAAAAGCTGGAAAGCTAACACTTTCAGATCTTTTCAGGAGGTGAGTTTAACTGTATCTTGTAAAATCATATCCTCTTCAAAAGAGGAGCAAGAGCTGTGTCTTACCTTGTTTACCCCTTCTTTTTTACCATAGGAGTGTCTAGATCTCATGTACATGGCAATAGAATGAGCCGTAATTGCCA-TTTTTTGACTGTGACATGGTAATTATTTATTATTATTACATATCA</genome_strand>
        <mrna_strand>GGGTTATTGCCAAGCAATCCAAGGAGAAGCATATTGAGAAGCATGATAATGAATCTCTGAGTCAGAAACTGGATAACGGGGATGCAGTAACTAAGAAAAAAAGTAAGGGCGAGCAGAGTGAATTGCCACAGAATGGAACAAGAATGGTGCTTGATGGAGTGAGGCATCCAGTGCCGTATCACAAAAAAGAGCAAAAGGGAGGCGATGAATATCAGCAGACTTCTGCAAACCATTTGAAACTTGTACACAATGTTGTCAATGGTGCAACTACCAAGCAGCACAAGGTGAAAGAGAAGCGTATTGAGAAGCATGATAATGAATCTCTGAGTCAGAAACTGGATAACGGGGATGCAGTAACTAAGAAAAAAAGTAAGAGCGAGCAGAGTGAATTGCCACAAAATGGAACAAGAATGGTGCTTGAAGGAGTGAGGCATCCAGCGCCGTCTCACAAAAAAGAGCAAAAGGGAGGTGATAAATATCAGCATACTTCTGCAAACCATTTGAAACTTATACACAATGTTGTCAATGTTGCAACTACCAAGCAGCACAAGGTGAAAGAGAAGCGTGATTCCCCACAAGAACAGAAGGAAGAAAAGATTGAGTCGTTACATAGCAGAGAACTGGATTTGAAGGGTGGTAAGTTGGCTTCGGATGAGAAGAGTAAACCAAAAGCTGGAAAGCTAACACTTTCAGATCTTTTCAGGAGGTGAGTTTAACTGTATCTTGTAAAATCATATCCTCTTCAAAAGAGGAGCAAGAGCTGTGTCTTACCTTGTTTACCCCTTCTTTTTTACCATAGGAGTGTCTAGATCTCATGTACATGGCAATAGAATGAGCCGTAATTGCCATTTTTTTGACTGTGACATGGTAATTATTTTTTTTTATTTCATATCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0031D11-98q2S/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U585713" ref_strand="+" ref_description="SGN-U585713 Tomato 200607#2 [2 ESTs aligned] (*GB) gi|5420282|emb|CAB46645.1| (e_value=0) cyclin B2 [Lycopersicon esculentum]; (*ATH) AT1G76310.1 (e_value=7e-117) | Symbol: None | cyclin, putative, similar to B-like cyclin GI:780267 from (Medicago sativa); contains Pfam profiles PF00134: Cyclin, N-terminal domain, PF02984: Cyclin, C-terminal domain | chr1:28632940-28635093 REVERSE | Aliases: F15M4.19; (*SWP) sp|P46277|CCNB1_MEDVA (e_value=6e-136) G2/mitotic-specific cyclin-1 OS=Medicago varia; ">
      <seq>gcacgagttttaaccagatacattcccatttttttcttacattctccatctttttctccccctttccatttgttcaacttttttcagaactctcttgtttcttcattggttcttaatcaagattgatcaagattcaatcttggtagagggtaactgaagaagagagtgaaagattcaattttttttccattcttgatttaggtttttttctgtaatcaagattcaatcttggagaggattaaagattctatttttttttcattcttgatttggggtttttcagttatcaagattgataagattcaatcttggttgagggtaactgaagaagagggttcaaaaacattttttttccattcttgatttggggtttttagtaaccaagtaaaagaaatggcaatcactgatgagaacaaacatcccttgattaaggaatcttctgttcgagtgaaagatagggctgaaatggctaccagaaaggttgttggagtggaaacaagaagcaaccgaagggttttgggcgcgattaatcagaatctagtgggtggtcagggggatccttgtgttgttaacaagagaagattatctgatggaaatggattctgtgacaagaatcttcctgttcatggtcatcgaccaatcacgaggaaatatgcagcacaaattgctagctcccagaaacacagctcagaggaaaacaagaaacctaagatagcagctgaaagtttcagcgtctgggaggatgatatggaggcagctaatgataagcctgtccctatgtctttggagcaaacagaaaaagtgtcaaagggcaaggatcaaatgacatacattcaggaggttgaaatggaggatatctttgaggaggctgtaatagatatcgacggtgatgatgcaaagaaccatcttgcagctgttgaatatgtgggagatttgtttgctaactacagaacaatggaggttaatagctgtgcttctccatactatatggcacaacaggctgacatcaatgagagaatgcggtctatcttgattgactggctaattgaggtgcatcacaagtttgagctcagggaagagacgttgttcctgaccgtcaatttgattgaccggttcttggagaagcaaggcattgtcagaaagaagctccagcttgttggattggttgcaatgctactagcatgcaagtatgaggaggtttgtgctccactggtggaggatctggtgttgatttcggacaaagcctatacaaggaaggaggttcttgaaatggaaagcatgatgctcaacacactgcagtttaatatgtctgtcccaactgcatacgtttttatgcgaagatatctcaaggctgctcaatgtgacaggaagcttgagctgctgtccttcatgttggttgagctttgccttgtggagtatgaaatgctcaaatttccaccatccttcatagctgctgcagcaatctatacagctcagaccacactctacggtgtccagcagtggagcaagacgtgcgaggtgcacacaacgtactcagaagatcaacttctggagtgctcgagatcaattgttggctaccaccagaaggcagcaacagggaaactaacaggggtacataggaaatacagcatatcgaaatttgggtatgcagccaagtgtgagcctgcccattttcttgtgcagcagacacaagaatagaggagaagaggggcatgtacagttattactaactttatatgcaaattggggatatatttgtggggtgatggagaatttataggaaaagataacttagcaactaatggttgccccgggggatttcattatttctttttatagagttcattattattgcacttttactatgttcaacatttgaacatccctgaatttattgtttcagttacagtttttcatttacaaacagaaataaaaagtcacaattttctcagagtggttttgctttattg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0031D11-98q2S/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0031D11.1" temp_strand="+" temp_description="C02SLe0031D11.1  AC215451.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0031D11 sequenced_by:kribb upload_account_name:korea">
        <position start="14291" stop="18066"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="14585" g_stop="15033" g_length="449"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="448" r_length="448" r_score="0.989"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="15034" i_stop="15123" i_length="90">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15124" g_stop="15265" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="449" r_stop="590" r_length="142" r_score="0.986"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="15266" i_stop="15374" i_length="109">
            <donor d_prob="0.962" d_score="0.96"/>
            <acceptor a_prob="0.997" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="15375" g_stop="15431" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="591" r_stop="647" r_length="57" r_score="0.982"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="15432" i_stop="15597" i_length="166">
            <donor d_prob="0.983" d_score="0.98"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="15598" g_stop="15643" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="648" r_stop="693" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="15644" i_stop="15755" i_length="112">
            <donor d_prob="0.969" d_score="1.00"/>
            <acceptor a_prob="0.973" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="15756" g_stop="15887" g_length="132"/>
          <reference_exon_boundary r_type="cDNA" r_start="694" r_stop="825" r_length="132" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="15888" i_stop="15977" i_length="90">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.804" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="15978" g_stop="16112" g_length="135"/>
          <reference_exon_boundary r_type="cDNA" r_start="826" r_stop="960" r_length="135" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="16113" i_stop="16412" i_length="300">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="16413" g_stop="16502" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="961" r_stop="1050" r_length="90" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="16503" i_stop="16582" i_length="80">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="16583" g_stop="16804" g_length="222"/>
          <reference_exon_boundary r_type="cDNA" r_start="1051" r_stop="1272" r_length="222" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="16805" i_stop="16894" i_length="90">
            <donor d_prob="0.945" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="16895" g_stop="16993" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="1273" r_stop="1371" r_length="99" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="16994" i_stop="17090" i_length="97">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.768" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="17091" g_stop="17269" g_length="179"/>
          <reference_exon_boundary r_type="cDNA" r_start="1372" r_stop="1550" r_length="179" r_score="1.000"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="17270" i_stop="17346" i_length="77">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="17347" g_stop="17766" g_length="420"/>
          <reference_exon_boundary r_type="cDNA" r_start="1551" r_stop="1970" r_length="420" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0031D11.1" gen_strand="+" ref_id="SGN-U585713" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>1971</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0031D11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U585713" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="14585" e_stop="15033"/>
          <exon e_start="15124" e_stop="15265"/>
          <exon e_start="15375" e_stop="15431"/>
          <exon e_start="15598" e_stop="15643"/>
          <exon e_start="15756" e_stop="15887"/>
          <exon e_start="15978" e_stop="16112"/>
          <exon e_start="16413" e_stop="16502"/>
          <exon e_start="16583" e_stop="16804"/>
          <exon e_start="16895" e_stop="16993"/>
          <exon e_start="17091" e_stop="17269"/>
          <exon e_start="17347" e_stop="17766"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTGGTATTTTTAACCAGATACATTCCCATTTTTTTCTTACATTCTCCATCTTTTTCTCCCCCTTTCCATTTGTTCAACTTTTTTCAGAACTCTCTTGTTTCTTCATTGGTTCTTAATCAAGATTGATCAAGATTCAATCTTGGTAGAGGGTAACTGAAGAAGAGAGTGAAAGATTCAATTTTTTTTCCATTCTTGATTTAGGTTTTTTTCTGTAATCAAGATTCAATCTTGGAGAGGATTAAAGATTCTATTTTTTTTTCATTCTTGATTTGGGGTTTTTCAGTTATCAAGATTGATAAGATTCAATCTTGGTTGAGGGTAACTGAAGAAGAGGGTTCAAAAACATTTTTTTTCCATTCTTGATTTGGGGTTTTTAGTAACCAAGTAAAAGAAATGGCAATCACTGATGAGAACAAACATCCCTTGATTAAGGAATCTTCTGTTCGAGGTATAAAATCCTGTTTTTTTTTTTAATGTATAAAGTTGCTAATTTGTGATAAATGAGTTTTTGATTTTTTTTTCTCTTGTCATTGTGAAGTGAAAGATAGGGCTGAAATGGCTACCAGAAAGGTTGTTGGAGTGGAAACAAGAAGCAACCGAAGGGTTTTGGGCGCGATTAATCAGAATCTAGTGGGTGGTCAGGGGTATCCTTGTGTTGTTAACAAGAGAGGATTATCTGAGTAATTAATCTTCATCTATAATCTTTTAGATTAGAATCTTTGACCATTTGTTGAGTCTTTACCATTTTTTGTCACTAGTTCTTTAGCTCATTTTGCTGTTCCTTTTCAGTGGAAATGGATTCTGTGACAAGAATCTTCCTGTTCATGGTCATCGACCCATCACGAGGTTAGACATTAAAAAATATTAGAATGTTGGTCAATCTTTGTTTTTTGCCCCACTCGTGGGATTACATTGAGTAGGTTGTTGTTGTTCGATCTTTGTTTTGCTGATTTTGAATTTGCATTTGATGTTCAATAACCTGATACTTGTAAAACTTAATTTGTCAATGAAGGAAATATGCAGCACAAATTGCTAGCTCCCAGAAACACAGCTCAGAGGTACAAGCTTTTAATGAATTGGAGTGTATCTTTGTTGATCACTCTGATATATAGTTTATAAAGTTTAATAAATAACTCTGGGAGATTAATAATTTTCGATTTCTTTGAACAGGAAAACAAGAAACCTAAGATAGCAGCTGAAAGTTTCAGCGTCTGGGAGGATGATATGGAGGCAGCTAATGATAAGCCTGTCCCTATGTCTTTGGAGCAAACAGAAAAAGTGTCAAAGGGCAAGGATCAAATGGTAACAAAAACAATCCTGTCTTTAAACTTTCATTAATTAATACTAGTATATTAATGTATATGTTTTTAATTAATGAGCTGATCATTAAAGACATACATTCAGGAGGTTGAAATGGAGGATATCTTTGAGGAGGCTGTAATAGATATCGACGGTGATGATGCAAAGAACCATCTTGCAGCTGTTGAATATGTGGGAGATTTGTTTGCTAACTACAGAACAATGGAGGTTAGTTTAGCTCAGTAACTTACTAGTTAACAGTTGCATAGATCCTTAATTCGTAAGATTAACTGCTTAATTAAATCTTTATAGCTTTGTCTGATGTGATACATTTGAATCTCCACTGACTTTTAAAATCATTAGTTAGATCCTGACATATTACACCTTTTTACATTGTTTATACAACTTTACTTGGATAGATCCTATAGTTGTTTTTATTTATTTCAAATCGTAGCATCTATATTTATGAGTTGAATTTCATCATTGTATGTGTTTGGGAATGATTAAATCATTGTCCATTATATTCAGGTTAATAGCTGTGCTTCTCCATACTATATGGCACAACAGGCTGACATCAATGAGAGAATGCGGTCTATCTTGATTGACTGGCTAATTGAGGTATAGTAAATATTCCCTCTGCTAAGTTGATAAATTTCTTCAAAGTATAGTAATTAATGTATGCTCATTCTGATCAACAGGTGCATCACAAGTTTGAGCTCAGGGAAGAGACGTTGTTCCTGACCGTCAATTTGATTGACCGGTTCTTGGAGAAGCAAGGCATTGTCAGAAAGAAGCTCCAGCTTGTTGGATTGGTTGCAATGCTACTAGCATGCAAGTATGAGGAGGTTTGTGCTCCACTGGTGGAGGATCTGGTGTTGATTTCGGACAAAGCCTATACAAGGAAGGAGGTTCTTGAAATGGTAAATTCTGGTCTCCTAATAGCTGTAATTAGTAAACTTTGGTCTACATTTAGTATATAACTGAAGGCGTTTTTTTTCCATATCATGCAGGAAAGCATGATGCTCAACACACTGCAGTTTAATATGTCTGTCCCAACTGCATACGTTTTTATGCGAAGATATCTCAAGGCTGCTCAATGTGACAGGAAGGTTAGTAGCTGATAGTTCTGAATGTACTTTACTTGTTTTTACATGTACCAAACACATTATTGATATTTCTCTAACTTCTACTCATGGCTTTAAACAGCTTGAGCTGCTGTCCTTCATGTTGGTTGAGCTTTGCCTTGTGGAGTATGAAATGCTCAAATTTCCACCATCCTTCATAGCTGCTGCAGCAATCTATACAGCTCAGACCACACTCTACGGTGTCCAGCAGTGGAGCAAGACGTGCGAGGTGCACACAACGTACTCAGAAGATCAACTTCTGTAAGTCTACAAACTCAAACACACCTTGCTCTTCTTATTTAGTTACTTATTTCCCTTCTTTTTCTTGCTGTGTTAAGGGAGTGCTCGAGATCAATTGTTGGCTACCACCAGAAGGCAGCAACAGGGAAACTAACAGGGGTACATAGGAAATACAGCATATCGAAATTTGGGTATGCAGCCAAGTGTGAGCCTGCCCATTTTCTTGTGCAGCAGACACAAGAATAGAGGAGAAGAGGGGCATGTACAGTTATTACTAACTTTATATGCAAATTGGGGATATATTTGTGGGGTGATGGAGAATTTATAGGAAAAGATAACTTAGCAACTAATGGTTGCCCCGGGGGATTTCATTATTTCTTTTTATAGAGTTCATTATTATTGCACTTTTACTATGTTCAACATTTGAACATCCCTGAATTTATTGTTTCAGTTACAGTTTTTCATTTACAAACAGAAATAAAAAGTCACAATTTTCTCAGAGTGGTTTTGCTTTATTG</genome_strand>
        <mrna_strand>GCACG-AGTTTTAACCAGATACATTCCCATTTTTTTCTTACATTCTCCATCTTTTTCTCCCCCTTTCCATTTGTTCAACTTTTTTCAGAACTCTCTTGTTTCTTCATTGGTTCTTAATCAAGATTGATCAAGATTCAATCTTGGTAGAGGGTAACTGAAGAAGAGAGTGAAAGATTCAATTTTTTTTCCATTCTTGATTTAGGTTTTTTTCTGTAATCAAGATTCAATCTTGGAGAGGATTAAAGATTCTATTTTTTTTTCATTCTTGATTTGGGGTTTTTCAGTTATCAAGATTGATAAGATTCAATCTTGGTTGAGGGTAACTGAAGAAGAGGGTTCAAAAACATTTTTTTTCCATTCTTGATTTGGGGTTTTTAGTAACCAAGTAAAAGAAATGGCAATCACTGATGAGAACAAACATCCCTTGATTAAGGAATCTTCTGTTCGAG..........................................................................................TGAAAGATAGGGCTGAAATGGCTACCAGAAAGGTTGTTGGAGTGGAAACAAGAAGCAACCGAAGGGTTTTGGGCGCGATTAATCAGAATCTAGTGGGTGGTCAGGGGGATCCTTGTGTTGTTAACAAGAGAAGATTATCTGA.............................................................................................................TGGAAATGGATTCTGTGACAAGAATCTTCCTGTTCATGGTCATCGACCAATCACGAG......................................................................................................................................................................GAAATATGCAGCACAAATTGCTAGCTCCCAGAAACACAGCTCAGAG................................................................................................................GAAAACAAGAAACCTAAGATAGCAGCTGAAAGTTTCAGCGTCTGGGAGGATGATATGGAGGCAGCTAATGATAAGCCTGTCCCTATGTCTTTGGAGCAAACAGAAAAAGTGTCAAAGGGCAAGGATCAAATG..........................................................................................ACATACATTCAGGAGGTTGAAATGGAGGATATCTTTGAGGAGGCTGTAATAGATATCGACGGTGATGATGCAAAGAACCATCTTGCAGCTGTTGAATATGTGGGAGATTTGTTTGCTAACTACAGAACAATGGAG............................................................................................................................................................................................................................................................................................................GTTAATAGCTGTGCTTCTCCATACTATATGGCACAACAGGCTGACATCAATGAGAGAATGCGGTCTATCTTGATTGACTGGCTAATTGAG................................................................................GTGCATCACAAGTTTGAGCTCAGGGAAGAGACGTTGTTCCTGACCGTCAATTTGATTGACCGGTTCTTGGAGAAGCAAGGCATTGTCAGAAAGAAGCTCCAGCTTGTTGGATTGGTTGCAATGCTACTAGCATGCAAGTATGAGGAGGTTTGTGCTCCACTGGTGGAGGATCTGGTGTTGATTTCGGACAAAGCCTATACAAGGAAGGAGGTTCTTGAAATG..........................................................................................GAAAGCATGATGCTCAACACACTGCAGTTTAATATGTCTGTCCCAACTGCATACGTTTTTATGCGAAGATATCTCAAGGCTGCTCAATGTGACAGGAAG.................................................................................................CTTGAGCTGCTGTCCTTCATGTTGGTTGAGCTTTGCCTTGTGGAGTATGAAATGCTCAAATTTCCACCATCCTTCATAGCTGCTGCAGCAATCTATACAGCTCAGACCACACTCTACGGTGTCCAGCAGTGGAGCAAGACGTGCGAGGTGCACACAACGTACTCAGAAGATCAACTTCT.............................................................................GGAGTGCTCGAGATCAATTGTTGGCTACCACCAGAAGGCAGCAACAGGGAAACTAACAGGGGTACATAGGAAATACAGCATATCGAAATTTGGGTATGCAGCCAAGTGTGAGCCTGCCCATTTTCTTGTGCAGCAGACACAAGAATAGAGGAGAAGAGGGGCATGTACAGTTATTACTAACTTTATATGCAAATTGGGGATATATTTGTGGGGTGATGGAGAATTTATAGGAAAAGATAACTTAGCAACTAATGGTTGCCCCGGGGGATTTCATTATTTCTTTTTATAGAGTTCATTATTATTGCACTTTTACTATGTTCAACATTTGAACATCCCTGAATTTATTGTTTCAGTTACAGTTTTTCATTTACAAACAGAAATAAAAAGTCACAATTTTCTCAGAGTGGTTTTGCTTTATTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0031D11-98q2S/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U588280" ref_strand="+" ref_description="SGN-U588280 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|5420282|emb|CAB46645.1| (e_value=2e-39) cyclin B2 [Lycopersicon esculentum]; ">
      <seq>gggataacaagaaacctaagatagcagctgaaagtttcagcgtctgggaggatgatatggaggcagctaatgataagcctgtccctatgtctttggagcaaacagaaaaagtgtcaaagggcaaggatcaaatggtaacaaaaacaatcctgtctttaaactttcattaattaatactagtatattaatgtatatgtttttaattaatgagctgatcattaaagacatacattcaggaggttgaaatggaggatatctttgaggaggctgtaatagatatcgacggtgatgatgcaaagaaccatcttgcagctgttgaatatgtgggagatttgtttgctaactacagaacaatggaggttagtttagctcagtaacttactagttaacagttgcatagatccttaattcgtaagattaactgcttaattaaatctttatagctttgtctgatgtgatacatttgaatctccactgacttttaaaatcattagttagatcctgacatattacacctttttacattgtttatacaactttacttggatagatcctatagttgtttttatttatttcaaatcgtagcatctatatttatgagttgaatttcatcattgtatgtgtttgggaatgattaaatcattgtccattatattcaggttaatagctgtgcttctccatactatatggcacaacaggctgacatcaatgagagaatgcggtctatcctgattgactggctaattgaggtatagtaaattattccctctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0031D11-98q2S/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0031D11.1" temp_strand="+" temp_description="C02SLe0031D11.1  AC215451.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0031D11 sequenced_by:kribb upload_account_name:korea">
        <position start="15455" stop="16823"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15754" g_stop="16523" g_length="770"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="771" r_length="771" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0031D11.1" gen_strand="+" ref_id="SGN-U588280" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>770</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0031D11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U588280" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15754" e_stop="16523"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGAAAACAAGAAACCTAAGATAGCAGCTGAAAGTTTCAGCGTCTGGGAGGATGATATGGAGGCAGCTAATGATAAGCCTGTCCCTATGTCTTTGGAGCAAACAGAAAAAGTGTCAAAGGGCAAGGATCAAATGGTAACAAAAACAATCCTGTCTTTAAACTTTCATTAATTAATACTAGTATATTAATGTATATGTTTTTAATTAATGAGCTGATCATTAAAGACATACATTCAGGAGGTTGAAATGGAGGATATCTTTGAGGAGGCTGTAATAGATATCGACGGTGATGATGCAAAGAACCATCTTGCAGCTGTTGAATATGTGGGAGATTTGTTTGCTAACTACAGAACAATGGAGGTTAGTTTAGCTCAGTAACTTACTAGTTAACAGTTGCATAGATCCTTAATTCGTAAGATTAACTGCTTAATTAAATCTTTATAGCTTTGTCTGATGTGATACATTTGAATCTCCACTGACTTTTAAAATCATTAGTTAGATCCTGACATATTACACCTTTTTACATTGTTTATACAACTTTACTTGGATAGATCCTATAGTTGTTTTTATTTATTTCAAATCGTAGCATCTATATTTATGAGTTGAATTTCATCATTGTATGTGTTTGGGAATGATTAAATCATTGTCCATTATATTCAGGTTAATAGCTGTGCTTCTCCATACTATATGGCACAACAGGCTGACATCAATGAGAGAATGCGGTCTATCTTGATTGACTGGCTAATTGAGGTATAGTAAA-TATTCCCTCTG</genome_strand>
        <mrna_strand>GGGATAACAAGAAACCTAAGATAGCAGCTGAAAGTTTCAGCGTCTGGGAGGATGATATGGAGGCAGCTAATGATAAGCCTGTCCCTATGTCTTTGGAGCAAACAGAAAAAGTGTCAAAGGGCAAGGATCAAATGGTAACAAAAACAATCCTGTCTTTAAACTTTCATTAATTAATACTAGTATATTAATGTATATGTTTTTAATTAATGAGCTGATCATTAAAGACATACATTCAGGAGGTTGAAATGGAGGATATCTTTGAGGAGGCTGTAATAGATATCGACGGTGATGATGCAAAGAACCATCTTGCAGCTGTTGAATATGTGGGAGATTTGTTTGCTAACTACAGAACAATGGAGGTTAGTTTAGCTCAGTAACTTACTAGTTAACAGTTGCATAGATCCTTAATTCGTAAGATTAACTGCTTAATTAAATCTTTATAGCTTTGTCTGATGTGATACATTTGAATCTCCACTGACTTTTAAAATCATTAGTTAGATCCTGACATATTACACCTTTTTACATTGTTTATACAACTTTACTTGGATAGATCCTATAGTTGTTTTTATTTATTTCAAATCGTAGCATCTATATTTATGAGTTGAATTTCATCATTGTATGTGTTTGGGAATGATTAAATCATTGTCCATTATATTCAGGTTAATAGCTGTGCTTCTCCATACTATATGGCACAACAGGCTGACATCAATGAGAGAATGCGGTCTATCCTGATTGACTGGCTAATTGAGGTATAGTAAATTATTCCCTCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0031D11-98q2S/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U576886" ref_strand="+" ref_description="SGN-U576886 Tomato 200607#2 [28 ESTs aligned] (*GB) gi|15237069|ref|NP_195288.1| (e_value=1e-176) phosphoserine aminotransferase [Arabidopsis thaliana]; (*ATH) AT4G35630.1 (e_value=7e-179)  Symbol: None | phosphoserine aminotransferase, chloroplast (PSAT), identical to Phosphoserine aminotransferase, chloroplast precursor (PSAT) (SP:Q96255)(Arabidopsis thaliana); contains TIGRFAM TIGR01364: phosphoserine aminotransferase; contains Pfam... ; (*SWP) sp|Q96255|SERC_ARATH (e_value=6e-178) Phosphoserine aminotransferase, chloroplastic OS=Arabidopsis thaliana GN=At4g35630; ">
      <seq>caaccttctctacacacagtttctaaagggaagaaaaaggcaaacaaacaatctgcggccatggctatgtcagctgccaccacccaatcgttcctccttaacaacaaaaccacccgccataactaccaaaccctcaaatccgccacccatatcgccaccttcccctccaccaccaccctaacctctacatacaaatctatgtctatttcctgctcagccgccgcctccacaactaccactcccctccaaacaccccctaccacctcatcagatcgggtcttcaacttcgctgccggacccgccacgctcccggaaaatgtcctacaaaaagcccaagccgacctcgttaactggcggggctccggcatgtccgttatggaaatgagccaccgtggaaaagaattcctttccattattcaaaaagcagaatcagatctgagaacccttcttaatatctctgatgaatacgccgttcttttccttcaaggtggggccaccacccaattcgccgccattcctctcaacatctgctcaccggacgacgccgttgattacatcgtcaccggttcatggggtgataaggctttcaaagaagcagctaaatacagcaaaccgaatgtcatttggagtggtaaatcggaaaaatacaccaagatcccgaattttgattcgttggtacaaaacccagatgccaagtatttgcatatatgcgccaatgaaactattcatggggttgaattcaaagattacccaacaccccttaacgagaaaaccattcttgttgctgatatgtcctcgaatttctgttcaaaaccagtagatgtttctaaatttggtatcatttacgctggtgcacagaaaaatgttggtccatctggagttaccattgtgattataaagaaagatttgattggaaatgcacaggaaagtacacctgtgatgttggattacaagatccatgctgagaacaattcgttgtataacacacccccttgttatggtatttacatgtgcgggcttgtgtttgaagatctgttggatcaaggtggattagtagaggttgagaagaagaatcagaagaaagctcagattttgtatgatgctattgattctagcaatggattttacaggtgcccagttgataaatcagtgaggtctttgatgaatgtgccatttacattggctaaaccagaattggaagctgaatttgtgaagacagctgctggtgagaagatggtgcagcttaagggacataggtctgttggtggaatgagggcttcaatatacaatgctatgcctttggctggagttgaaaagttggtagctttcatgaaggagttccaagctaagcatggttaaaactatattgttctattttaatatttgcaaccctttataattttctgtttttttgtgcctttatgttctgttggtttatttgagttgagagagagagtctgaatgacaacacttgagtatgtgttagtcctattgattcttgtgtacttctaggaagtttttgtttttagaaatatggaaactattacttagtcctattagaagttcaatgaagaagtattttcaatttggtttttttggtttcattgttgagcagcactcactccattttatgagcaatatggtgaataagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0031D11-98q2S/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0031D11.1" temp_strand="+" temp_description="C02SLe0031D11.1  AC215451.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0031D11 sequenced_by:kribb upload_account_name:korea">
        <position start="21836" stop="24088"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="22136" g_stop="23788" g_length="1653"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="1652" r_length="1652" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0031D11.1" gen_strand="+" ref_id="SGN-U576886" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>1653</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0031D11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U576886" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="22136" e_stop="23788"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAACCTTCTCTACACACAGTTTCTAAAGGGAAGAAAAAGGCAAACAAACAATCTGCGGCCATGGCTATGTCAGCTGCCACCACCCAATCGTTCCTCCTTAACAACAAAACCACCCGCCATAACTACCAAACCCTCAAATCCGCCACCCATATCGCCACCTTCCCCTCCACCACCACCCTAACCTCTACATACAAATCTATGTCTATTTCCTGCTCAGCCGCCGCCTCCACAACTACCACTCCCCTCCAAACACCCCCTACCACCTCATCAGATCGGGTCTTCAACTTCGCTGCCGGACCCGCCACGCTCCCGGAAAATGTCCTACAAAAAGCCCAAGCCGACCTCGTTAACTGGCGGGGCTCCGGCATGTCCGTTATGGAAATGAGCCACCGTGGAAAAGAATTCCTTTCCATTATTCAAAAAGCAGAATCAGATCTGAGAACCCTTCTTAATATCTCTGATGAATACGCCGTTCTTTTCCTTCAAGGTGGGGCCACCACCCAATTCGCCGCCATTCCTCTCAACATCTGCTCACCGGACGACGCCGTTGATTACATCGTCACCGGTTCATGGGGTGATAAGGCTTTCAAAGAAGCAGCTAAATACAGCAAACCGAATGTCATTTGGAGTGGTAAATCGGAAAAATACACCAAGATCCCGAATTTTGATTCGTTGGTACAAAACCCAGATGCCAAGTATTTGCATATATGCGCCAATGAAACTATTCATGGGGTTGAATTCAAAGATTACCCAACACCCCTTAACGAGAAAACCATTCTTGTTGCTGATATGTCCTCGAATTTCTGTTCAAAACCAGTAGATGTTTCTAAATTTGGTATCATTTACGCTGGTGCACAGAAAAATGTTGGTCCATCTGGAGTTACCATTGTGATTATAAGGAAAGATTTGATTGGAAATGCACAGGAAAGTACACCTGTGATGTTGGATTACAAGATCCATGCTGAGAACAATTCGTTGTATAACACACCCCCTTGTTATGGTATTTACATGTGCGGGCTTGTGTTTGAAGATCTGTTGGATCAAGGTGGATTAGTAGAGGTTGAGAAGAAGAATCAGAAGAAAGCTCAGATTTTGTATGATGCTATTGATTCTAGCAATGGATTTTACAGGTGCCCAGTTGATAAATCAGTGAGGTCTTTGATGAATGTGCCATTTACATTGGCTAAACCAGAATTGGAAGCTGAATTTGTGAAGACAGCTGCTGGTGAGAAGATGGTGCAGCTTAAGGGACATAGGTCTGTTGGTGGAATGAGGGCTTCAATATACAATGCTATGCCTTTGGCTGGAGTTGAAAAGTTGGTAGCTTTCATGAAGGAGTTCCAAGCTAAGCATGGTTAAAACTATATTGTTCTATTTTAATATTTGCAACCCTTTATAATTTTCTGTTTTTTTGTGCCTTTATGTTCTGTTGGTTTATTTGAGTTGAGAGAGAGAGTCTGAATGACAACACTTGAGTATGTGTTAGTCCTATTGATTCTTGTGTACTTCTAGGAAGTTTTTGTTTTTAGAAATATGGAAACTATTACTTAGTCCTATTAGAAGTTTAATGAAGAAGTATTTTCAATTTGTTTTTTTTGGTTTCATTGTTGAGCAGCACTCGCTCCATTTTATGAGGAATATGGTTGAATAAGT</genome_strand>
        <mrna_strand>CAACCTTCTCTACACACAGTTTCTAAAGGGAAGAAAAAGGCAAACAAACAATCTGCGGCCATGGCTATGTCAGCTGCCACCACCCAATCGTTCCTCCTTAACAACAAAACCACCCGCCATAACTACCAAACCCTCAAATCCGCCACCCATATCGCCACCTTCCCCTCCACCACCACCCTAACCTCTACATACAAATCTATGTCTATTTCCTGCTCAGCCGCCGCCTCCACAACTACCACTCCCCTCCAAACACCCCCTACCACCTCATCAGATCGGGTCTTCAACTTCGCTGCCGGACCCGCCACGCTCCCGGAAAATGTCCTACAAAAAGCCCAAGCCGACCTCGTTAACTGGCGGGGCTCCGGCATGTCCGTTATGGAAATGAGCCACCGTGGAAAAGAATTCCTTTCCATTATTCAAAAAGCAGAATCAGATCTGAGAACCCTTCTTAATATCTCTGATGAATACGCCGTTCTTTTCCTTCAAGGTGGGGCCACCACCCAATTCGCCGCCATTCCTCTCAACATCTGCTCACCGGACGACGCCGTTGATTACATCGTCACCGGTTCATGGGGTGATAAGGCTTTCAAAGAAGCAGCTAAATACAGCAAACCGAATGTCATTTGGAGTGGTAAATCGGAAAAATACACCAAGATCCCGAATTTTGATTCGTTGGTACAAAACCCAGATGCCAAGTATTTGCATATATGCGCCAATGAAACTATTCATGGGGTTGAATTCAAAGATTACCCAACACCCCTTAACGAGAAAACCATTCTTGTTGCTGATATGTCCTCGAATTTCTGTTCAAAACCAGTAGATGTTTCTAAATTTGGTATCATTTACGCTGGTGCACAGAAAAATGTTGGTCCATCTGGAGTTACCATTGTGATTATAAAGAAAGATTTGATTGGAAATGCACAGGAAAGTACACCTGTGATGTTGGATTACAAGATCCATGCTGAGAACAATTCGTTGTATAACACACCCCCTTGTTATGGTATTTACATGTGCGGGCTTGTGTTTGAAGATCTGTTGGATCAAGGTGGATTAGTAGAGGTTGAGAAGAAGAATCAGAAGAAAGCTCAGATTTTGTATGATGCTATTGATTCTAGCAATGGATTTTACAGGTGCCCAGTTGATAAATCAGTGAGGTCTTTGATGAATGTGCCATTTACATTGGCTAAACCAGAATTGGAAGCTGAATTTGTGAAGACAGCTGCTGGTGAGAAGATGGTGCAGCTTAAGGGACATAGGTCTGTTGGTGGAATGAGGGCTTCAATATACAATGCTATGCCTTTGGCTGGAGTTGAAAAGTTGGTAGCTTTCATGAAGGAGTTCCAAGCTAAGCATGGTTAAAACTATATTGTTCTATTTTAATATTTGCAACCCTTTATAATTTTCTGTTTTTTTGTGCCTTTATGTTCTGTTGGTTTATTTGAGTTGAGAGAGAGAGTCTGAATGACAACACTTGAGTATGTGTTAGTCCTATTGATTCTTGTGTACTTCTAGGAAGTTTTTGTTTTTAGAAATATGGAAACTATTACTTAGTCCTATTAGAAGTTCAATGAAGAAGTATTTTCAATTTGGTTTTTTTGGTTTCATTGTTGAGCAGCACTCACTCCATTTTATGAGCAATATGG-TGAATAAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0031D11-98q2S/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U576885" ref_strand="+" ref_description="SGN-U576885 Tomato 200607#2 [4 ESTs aligned] (*GB) gi|21592931|gb|AAM64881.1| (e_value=2e-83) phosphoserine aminotransferase [Arabidopsis thaliana]; (*ATH) AT4G35630.1 (e_value=2e-85)  Symbol: None | phosphoserine aminotransferase, chloroplast (PSAT), identical to Phosphoserine aminotransferase, chloroplast precursor (PSAT) (SP:Q96255)(Arabidopsis thaliana); contains TIGRFAM TIGR01364: phosphoserine aminotransferase; contains Pfam... ; (*SWP) sp|Q96255|SERC_ARATH (e_value=2e-84) Phosphoserine aminotransferase, chloroplastic OS=Arabidopsis thaliana GN=At4g35630; ">
      <seq>ttctctacacacacagtttctaaagggaagaaaaaggcaaacaaacaatctgcagccatggctatgtcagctgccaccacccaatcgttcctccttaacaacaaaaccacccgccataactaccaaaccctcaaatctgccacccatatcgccgccttcccctccacccatgtccaccccaccaccaccctaacctctacatacaaatctatgtccatttcctgctcagccgccgcctccacaactaccactcccctccaaacaccccctaccacctcatcagatcgggtcttcaacttcgctgccggacccgccactctcccggaaaatgtcctccaaaaagcccaagccgacctcgttaactggcggggctccggcatgtccgttatggaaatgagccaccgtggaaaagaattcctttccattattcaaaaagcagaatcagatctgagaacccttcttaatatctctgatgaatacgccgttcttttccttcaaggtggggccaccacccaattcgccgccattcctctcaacatctgctcaccggacgacgccgttgattacatcgtcaccggttcatggggtgacaaggcttacaaagaagcagctaaatacagcaaaccgaatgtcatttggagtggtaaatcggaaaaatacaccaagatcccaaattttgattcgttggtacaaaacccagatgccaagtatttgcatatatgcgccaatgaaactattcatggggttgaattcaaaaattacccaacaccccttaacgagaaaaccattcttgttgctgatatgtcctcccaattctgttcaaaaccagtagatgtttctaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0031D11-98q2S/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0031D11.1" temp_strand="+" temp_description="C02SLe0031D11.1  AC215451.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0031D11 sequenced_by:kribb upload_account_name:korea">
        <position start="21842" stop="23265"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="22139" g_stop="22965" g_length="827"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="842" r_length="842" r_score="0.942"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0031D11.1" gen_strand="+" ref_id="SGN-U576885" ref_strand="+">
        <total_alignment_score>0.942</total_alignment_score>
        <cumulative_length_of_scored_exons>827</cumulative_length_of_scored_exons>
        <coverage percentage="0.982" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0031D11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U576885" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="22139" e_stop="22965"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTTCTCTACACACAGTTTCTAAAGGGAAGAAAAAGGCAAACAAACAATCTGCGGCCATGGCTATGTCAGCTGCCACCACCCAATCGTTCCTCCTTAACAACAAAACCACCCGCCATAACTACCAAACCCTCAAATCCGCCACCCATATCGCCACC-T----T-C-CCC---T-----CCACCACCACCCTAACCTCTACATACAAATCTATGTCTATTTCCTGCTCAGCCGCCGCCTCCACAACTACCACTCCCCTCCAAACACCCCCTACCACCTCATCAGATCGGGTCTTCAACTTCGCTGCCGGACCCGCCACGCTCCCGGAAAATGTCCTACAAAAAGCCCAAGCCGACCTCGTTAACTGGCGGGGCTCCGGCATGTCCGTTATGGAAATGAGCCACCGTGGAAAAGAATTCCTTTCCATTATTCAAAAAGCAGAATCAGATCTGAGAACCCTTCTTAATATCTCTGATGAATACGCCGTTCTTTTCCTTCAAGGTGGGGCCACCACCCAATTCGCCGCCATTCCTCTCAACATCTGCTCACCGGACGACGCCGTTGATTACATCGTCACCGGTTCATGGGGTGATAAGGCTTTCAAAGAAGCAGCTAAATACAGCAAACCGAATGTCATTTGGAGTGGTAAATCGGAAAAATACACCAAGATCCCGAATTTTGATTCGTTGGTACAAAACCCAGATGCCAAGTATTTGCATATATGCGCCAATGAAACTATTCATGGGGTTGAATTCAAAGATTACCCAACACCCCTTAACGAGAAAACCATTCTTGTTGCTGATATGTCCTCGAATTTCTGTTCAAAACCAGTAGATGTTTCTAA</genome_strand>
        <mrna_strand>TTCTCTACACACACAGTTTCTAAAGGGAAGAAAAAGGCAAACAAACAATCTGCAGCCATGGCTATGTCAGCTGCCACCACCCAATCGTTCCTCCTTAACAACAAAACCACCCGCCATAACTACCAAACCCTCAAATCTGCCACCCATATCGCCGCCTTCCCCTCCACCCATGTCCACCCCACCACCACCCTAACCTCTACATACAAATCTATGTCCATTTCCTGCTCAGCCGCCGCCTCCACAACTACCACTCCCCTCCAAACACCCCCTACCACCTCATCAGATCGGGTCTTCAACTTCGCTGCCGGACCCGCCACTCTCCCGGAAAATGTCCTCCAAAAAGCCCAAGCCGACCTCGTTAACTGGCGGGGCTCCGGCATGTCCGTTATGGAAATGAGCCACCGTGGAAAAGAATTCCTTTCCATTATTCAAAAAGCAGAATCAGATCTGAGAACCCTTCTTAATATCTCTGATGAATACGCCGTTCTTTTCCTTCAAGGTGGGGCCACCACCCAATTCGCCGCCATTCCTCTCAACATCTGCTCACCGGACGACGCCGTTGATTACATCGTCACCGGTTCATGGGGTGACAAGGCTTACAAAGAAGCAGCTAAATACAGCAAACCGAATGTCATTTGGAGTGGTAAATCGGAAAAATACACCAAGATCCCAAATTTTGATTCGTTGGTACAAAACCCAGATGCCAAGTATTTGCATATATGCGCCAATGAAACTATTCATGGGGTTGAATTCAAAAATTACCCAACACCCCTTAACGAGAAAACCATTCTTGTTGCTGATATGTCCTCCCAATTCTGTTCAAAACCAGTAGATGTTTCTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0031D11-98q2S/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U588561" ref_strand="-" ref_description="SGN-U588561 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|157328873|emb|CAO23276.1| (e_value=1e-95) unnamed; (*ATH) AT2G17630.1 (e_value=3e-92)  Symbol: None | phosphoserine aminotransferase, putative, similar to Phosphoserine aminotransferase, chloroplast precursor (PSAT) (SP:Q96255) (Arabidopsis thaliana); contains TIGRFAM TIGR01364: phosphoserine aminotransferase; contains Pfam PF00266: a... ; (*SWP) sp|Q96255|SERC_ARATH (e_value=1e-90) Phosphoserine aminotransferase, chloroplastic OS=Arabidopsis thaliana GN=At4g35630; ">
      <seq>tctcaacctctattaatcccccttgatccaacagatcttcaaacacaagcccgcacatgtaaataccataacaagggggtgtgttatacaacgaattgttctcagcatggatcttgtaatccaacatcacaggtgtactttcctgtgcatttccaatcaaatctttccttataatcacaatggtaactccagatggaccaacatttttctgtgcaccagcgtaaatgataccaaatntagaaacatctactggttttgaacagaaattcgaggacatatcagcaacaagaatggttttctcgttaaggggtgttgggtaatctttgaattcaaccccatgaatagtttcattggcgcatatatgcaaatacttggcatctgggttttgtaccaacgaatcaaaattcgggatcttggtgtatttttccgatttaccactccaaatgacattcggtttgctgtatttagctgcttctttgaaagccttatcaccccatgaaccggtgacgatgtaatcaacggcgtcgtccggtgagcagatgttgagaggaatggcggcgaattgggtggttttgttgttaaggaggaacgattgggtggtggcagctgacatagccatggccgcagattgtttgtttgcctttttcttccctttagaagaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0031D11-98q2S/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0031D11.1" temp_strand="-" temp_description="C02SLe0031D11.1  AC215451.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0031D11 sequenced_by:kribb upload_account_name:korea">
        <position start="23501" stop="21856"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="23201" g_stop="22636" g_length="566"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="566" r_length="566" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="22635" i_stop="22249" i_length="387">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="22248" g_stop="22152" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="567" r_stop="663" r_length="97" r_score="0.959"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0031D11.1" gen_strand="-" ref_id="SGN-U588561" ref_strand="-">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>663</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0031D11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U588561" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="23201" e_stop="22636"/>
          <exon e_start="22248" e_stop="22152"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTCAACCTCTACTAATCCACCTTGATCCAACAGATCTTCAAACACAAGCCCGCACATGTAAATACCATAACAAGGGGGTGTGTTATACAACGAATTGTTCTCAGCATGGATCTTGTAATCCAACATCACAGGTGTACTTTCCTGTGCATTTCCAATCAAATCTTTCCTTATAATCACAATGGTAACTCCAGATGGACCAACATTTTTCTGTGCACCAGCGTAAATGATACCAAATTTAGAAACATCTACTGGTTTTGAACAGAAATTCGAGGACATATCAGCAACAAGAATGGTTTTCTCGTTAAGGGGTGTTGGGTAATCTTTGAATTCAACCCCATGAATAGTTTCATTGGCGCATATATGCAAATACTTGGCATCTGGGTTTTGTACCAACGAATCAAAATTCGGGATCTTGGTGTATTTTTCCGATTTACCACTCCAAATGACATTCGGTTTGCTGTATTTAGCTGCTTCTTTGAAAGCCTTATCACCCCATGAACCGGTGACGATGTAATCAACGGCGTCGTCCGGTGAGCAGATGTTGAGAGGAATGGCGGCGAATTGGGTGGTGGCCCCACCTTGAAGGAAAAGAACGGCGTATTCATCAGAGATATTAAGAAGGGTTCTCAGATCTGATTCTGCTTTTTGAATAATGGAAAGGAATTCTTTTCCACGGTGGCTCATTTCCATAACGGACATGCCGGAGCCCCGCCAGTTAACGAGGTCGGCTTGGGCTTTTTGTAGGACATTTTCCGGGAGCGTGGCGGGTCCGGCAGCGAAGTTGAAGACCCGATCTGATGAGGTGGTAGGGGGTGTTTGGAGGGGAGTGGTAGTTGTGGAGGCGGCGGCTGAGCAGGAAATAGACATAGATTTGTATGTAGAGGTTAGGGTGGTGGTGGAGGGGAAGGTGGCGATATGGGTGGCGGATTTGAGGGTTTGGTAGTTATGGCGGGTGGTTTTGTTGTTAAGGAGGAACGATTGGGTGGTGGCAGCTGACATAGCCATGGCCGCAGATTGTTTGTTTGCCTTTTTCTTCCCTTTAGAAACTG</genome_strand>
        <mrna_strand>TCTCAACCTCTATTAATCCCCCTTGATCCAACAGATCTTCAAACACAAGCCCGCACATGTAAATACCATAACAAGGGGGTGTGTTATACAACGAATTGTTCTCAGCATGGATCTTGTAATCCAACATCACAGGTGTACTTTCCTGTGCATTTCCAATCAAATCTTTCCTTATAATCACAATGGTAACTCCAGATGGACCAACATTTTTCTGTGCACCAGCGTAAATGATACCAAATNTAGAAACATCTACTGGTTTTGAACAGAAATTCGAGGACATATCAGCAACAAGAATGGTTTTCTCGTTAAGGGGTGTTGGGTAATCTTTGAATTCAACCCCATGAATAGTTTCATTGGCGCATATATGCAAATACTTGGCATCTGGGTTTTGTACCAACGAATCAAAATTCGGGATCTTGGTGTATTTTTCCGATTTACCACTCCAAATGACATTCGGTTTGCTGTATTTAGCTGCTTCTTTGAAAGCCTTATCACCCCATGAACCGGTGACGATGTAATCAACGGCGTCGTCCGGTGAGCAGATGTTGAGAGGAATGGCGGCGAATTGG...................................................................................................................................................................................................................................................................................................................................................................................................GTGGTTTTGTTGTTAAGGAGGAACGATTGGGTGGTGGCAGCTGACATAGCCATGGCCGCAGATTGTTTGTTTGCCTTTTTCTTCCCTTTAGAAGAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0031D11-98q2S/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U586456" ref_strand="-" ref_description="SGN-U586456 Tomato 200607#2 [2 ESTs aligned] (*GB) gi|30698178|ref|NP_851277.1| (e_value=3e-33) Golgi-localized protein GRIP [Arabidopsis thaliana]; (*ATH) AT5G66030.2 (e_value=2e-35) | Symbol: None | Golgi-localized GRIP domain-containing protein, contains Pfam profile PF01465: GRIP domain; supporting cDNA gi:20303028:gb:AF499634.1: | chr5:26422147-26427114 REVERSE | Aliases: None; ">
      <seq>ttgaatagagacttttagagaaaaagcagacacgaggtgctgcagaggtagcactaaagcatcttcaaactctaatttggaagctgacacaaaggcccaagagttgtctgtcaaagttgctgaagtacaaaataagatggatcaggaaataaaagaacgtgatgagaagtactcagagctagactcgaagttcaacagacttcacaaacgggcaaagcagcgtattcaagaggtgcaaaaggaaaaagatgatcttgaggcccagtttcgtgatgtcaatgagaaatctgagcgcgcatcctcgcaattatctgcattgcagcaagagttggagcgcagtagacaacacgctcaggaggcactgaaagcaagcccgtcaaaagatacatcaggatcggggagctcactgttttctagattctcattctcttaacagccaatgagggctgcagagatgcttcccaaatgttgtcttatccagcttcagtagatagtctgtagcagacgtggaaggagagatacagtagaggaatgttttgtgttcttatgtaattaacaaagaaatgcaaaagaagaacaaaacacaaaaaatgagtaggcatcccttgtcgttcttcacacgatatgtatatcaaaggtatttcgttcttcctttttttgtttaattgagtgcagagagagaaggaagagcacatttgatagaaattgtaaaatttttgcgtaaggaaacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0031D11-98q2S/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0031D11.1" temp_strand="-" temp_description="C02SLe0031D11.1  AC215451.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0031D11 sequenced_by:kribb upload_account_name:korea">
        <position start="35141" stop="24323"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34841" g_stop="34715" g_length="127"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="125" r_length="125" r_score="0.969"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="34714" i_stop="34513" i_length="202">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.945" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="34512" g_stop="34397" g_length="116"/>
          <reference_exon_boundary r_type="cDNA" r_start="126" r_stop="241" r_length="116" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="34396" i_stop="33691" i_length="706">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="33690" g_stop="33564" g_length="127"/>
          <reference_exon_boundary r_type="cDNA" r_start="242" r_stop="368" r_length="127" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="33563" i_stop="24986" i_length="8578">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="24985" g_stop="24623" g_length="363"/>
          <reference_exon_boundary r_type="cDNA" r_start="369" r_stop="731" r_length="363" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0031D11.1" gen_strand="-" ref_id="SGN-U586456" ref_strand="-">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>733</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0031D11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U586456" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="34841" e_stop="34715"/>
          <exon e_start="34512" e_stop="34397"/>
          <exon e_start="33690" e_stop="33564"/>
          <exon e_start="24985" e_stop="24623"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGAATAGAGAACTTTTAGAGGAAAAGCAAACACGAGGTGCTGCAGAGGTAGCACTAAAGCATCTTCAAACTCTATATTTGGAAGCTGACACAAAGGCCCAAGAGTTGTCTGTCAAAGTTGCTGAAGGTTGTGATTTGCTTTGACTTCCATTTTCTTCTTCATGTTTGTTGAATTCAACATCAATATGGAACTCGGATTTTATGATAAGTTCTAAATGTTGGTGATGTACTTCCATTGTTAGTTGCAGATTTTTTGGTTTTCCTTTTTTAGTTTCAGTTGACAAAGAAGATATGCTATTCTGAAGTCTATAAATGGTTTGTTTGAATAGTACAAAATAAGATGGATCAGGAAATAAAAGAACGTGATGAGAAGTACTCAGAGCTAGACTCGAAGTTCAACAGACTTCACAAACGGGCAAAGCAGCGTATTCAAGAGGTGCAAAAGGTAAATTCTGAGACTATCCTCTTTTATTTGATATGTCTGATGTCTTTCATCAATTTTTCATCAAAACTTGGTCAACTTTACAAAAGGTGTTTTACTTCTACAAAACCTTCCGAGTTCTAGCAAAACCTTGTATAGATAACAATATATTCTACAACAACAAATGAAACTGGAGAAAATTTTTGATTATAGATGGTTTTCATCTCCTTAAAATGTTACTACTCTTTTCTTTCTGAATCGTCCGAAGATGCAAATGAGGCTTCACTTCCATTTATCTTTCTTCCTTATATCCATCTTCATTGCCCTTCAGCTTCTTGCTGCTTTTGCACTAGGAGTCACCCATGATATATTGAATAGGGAGTACCGATTTTAATTATGACATGAAACTACCTGCTAAAATAGACTTGAAAACTGCATTTTATCTTAATGTCCAAATGTAGTTCCTGTAGGATTGGGTGACTTTTGGTGAGGACCATATTTTGTAGGTTTTTCCTTTTCTGGTATACCACTTGTATAAATCCATGATGACCTTGTTATTATCAATGAAATCTGTTACTTGATAGAAAAGATGCAATTAAATTTGGACATTAAGATAAAAATGTGGTGGACAAGTTATTCAAGTTGTACATTAATTGCTTACATCTTTTTTAATTTTTAAAGAAAGAATTACGATAATTAACTATTTTTTGTTGCAATTCTGTTTCTTTAGGAAAAAGATGATCTTGAGGCCCAGTTTCGTGATGTCAATGAGAAATCTGAGCGCGCATCCTCGCAATTATCTGCATTGCAGCAAGAGTTGGAGCGCAGTAGACAACACGCTCAGGAGGCACTGAAAGCAATGGATTTGGATAGGCAACAGTTAAGAAGTACAAACAACAAGTATGTCCTCCTTGTGAACTTAGTTGACACTGCTTCTTCACAAGTGATTTTGATGGATTATCTGTTTATTATTTGGATTAGATTTGAAGAAAAAGAAAAAAAGAACAAAGAGATATCATCAGAGCTACCTGTCGAACAACTTCTTGATTGAGCTACAAGATTACCCCTTGAGATCCTCAAGTGTCCATATACTAAATGAGAAAATAACCTTTTAACATAATCACCTAACATTTTGTCAATTTATCTCATCTTTTTCACGTTCGAATTGCTTGCAGTAATGATATGATATGTTTTTTCTCTTTTTTGACGATGTCAAGTCTTTATTAAATAGTTGCATCAGGCTTTGGAATTGTCAGTTTTGTTTAGATACCAAGCTAGTTCATGTCAACTCGTCCCAGATGTTCTATCGATTTTGTCATATCAATAATTCAGTATTGCTTTTCTAAATGTGAAATTTCTTTTGGATTTTCTTGTCATAAGATGCTTGATTACTTATTTTCAGTACACAAATTTGTTAATTTTTAGGCTCAGAGACAACATTGAAGAGCTGCGCCGTTCCTTGGCACCAAAAGAGAATGCTCTGGAGGCATCACAACAGGCACTTCTAGAGAAAGAGCAGGTGTGCAGCTGTGAGAAAGTTCACTTATTGTATCAAGTTAAATGCCTATAAATAGATAGTGTTGATTGTTTTATGGCTTCCTGAGTCAATCTTATGCCCTTACCTGTCTTCTAAGTATTTCTTAAATCCTTTTGGTATTTGTATTCAATTTTATTTACATAGGTGGTGAAGCTCTAAGTTGAAGCAGGAATATACGCTGGCACATGGGCATTACCACCTGACGCGCACACACCCGTGAAAAAAAAGGGTAGAAAAGAAGAATTAGTTGAAAGTTTTCAAACTAGTAAATAGACAAGTAGATCTCCAAAAACCCATTAAGAAATAGAGCAAGTTGATTTGGCAGTCTGGCATTTATAACTGATCTCTCCCTCCTTATATTTGTTTCTTTTGTAAGAAAATTGTTGGTAAGTTAACTATTCAGTTTTTTTTGTTCCCTAGCAAAAGGGCATCTTTAAAGCTCTTTTAATTTGTAAAAAGATTTGTCTAAGACATTGCTAGGAGAGTATAATTTGTCAGCTGCCGCTCTAAGATGGTGCCCGAGAAAGCTTGTTTTGAGCATCTTTAAAGCTCTTTTAATTTGTAAAAAGATTTGTCTAAGGAGACATTGCTAGAAGAGTCTGCTGCGGCTCTAAGATGGTGCCCGAGCAAGCTTGTTTTGAGAAAGGCAAGATGAAAAATAAAAAAAAAATAATTTAAGAAGAAAATTAACTAAAAAATAAAGCAGTGGACTGCAAATAACTGAAATTAGTGAGATAATTCTCATGTCAATCAAGTTAAGAACTGTTTTAAATCTCTAAATAAGCAATTTTAAGTTTCTAATTCAGATACTTGCTGGTTTACACGTACTAAATTCTAGTTTAATGTACTTGTTCACTAGAATATTCATGCATAATGTTTTTTTAAAAACAAATTTTTGCATCACTTTATCATCAATATTTATAATTTTACTCACTTCAAGATAGAGCCCGTCGGTAGTCGCGTTAGCTAGCCAGCTTATTAGTTTCTGATTTTAGTGTTGTTTCCTTGTGTCATTACGGATAAATGTATTTTATTCTTTTGAGATCTAGACAATGTTAATGATAATTGTTCTCATTTGAGCAAGATATCCAGTAAAAAGAATCCATCTTCCGGGTTACTTTTCTAGTATTTCCTTACTTATTGCACTCCATGTGTGGTGACGTTTTATGATTTCTTGTGTTTTGCATTTAGTCATCTAAAATAGATTGCCAGTTGCCTAGCGGGGTTCGGATTCAAACTAGTGTGAATCTCTGCAGACTTCAAGTGTAGATGGAGTGGACAGAGTTTTATTCCAGAAGCAAAGACACGTTTTATCTTTTAAATGGACTTGTGTGCTTTCTCGCTTTAAAATGGATAAGATTAAATTGAAGTTTATCAAGGTCTACAGAGATGCTTATGGTATTTTTCAAGGAGAAATAGATAATAATTTGAGGACCAGGAATCTCATGTTGACCGAAAAGGCTAGAAATAAAATGGTTTTTCAATTATGAAACCCAGGATACGTGTAAAGGTTCATGGCAAATTGTGGATATCTTTGGCCTATGTCTAAGTTCTCTCTTGATACAGCTCTTGAACTTAGAGGATCTTTGCTGAACCTTGGTTTTGCAGAAGTTAGAAGAGATGCAAGCATTACTGCAGGCAGCAGATGAGAAGAGACAAGCTTCAATTGAAGACCTCTCTTCAAAGCATCAGAAGGTACAAAGGCAGTATTACTGTTGCCCTGGTGCTTTAGCTTCCTTCTTTAGTTCTGACCATTTCTTAAATAAATTCTCTTTTACATCAGCAAAAAGAGAGTCTGGAAGCCCAAATTGCTGAGGCATTGGCTGAAAGAAGCAAAGCAGCTGAAACAATCTCATCTCTGCGGGTAATGATTCTATTCCCAATTGTACACAGAGATGGAATAATGCAAGCGATATAAACTTCATCTTGCTCATATATATTTTGATAATTTAATGAGGTACCGATGATCTGAAAAATGACATCTAATGTATTTCTTGCTCAGTGGATTTTTGGTTCCACAACGTTCTCAGGATCCTGTTTATTATGTATTAGTTGTTCAATTTAGTATCTTCTGGATATTTGGAGCTCTGATCGTGCATTGTTCCTTGTAGACTGTGGTTGCAGAGAAGGAGTTTAAGATTGCAGAGATGGATGCAGCTTCCACTGGTGAAGCAGCAAGACTTAGAGCTGCTTTTGAAACAGTTAAAGGAGACATTGTTCATCTGAAAAGTGAACAAGTATGAGCTAACACTTCTCAATTTGACCTTAAAATTCATTCGGAACGATTCTTTTCGGAGCATGTCGGTCATTCAAACATATATTATTCCAAGACTATGAGTTGCTAAAGTTCCGCTCCTTTTTTGAGATTGCCAATCTGAAAAGGAAGTTTCTGCTTCACTGGCAGTCAAGCACCAGATCACAGGCTTAGTTGTTGGGAATCCTAAATTATACTTGTTACTCTCTGCTAACCAATATGTCTTTACCAACGCATGCCTTTCTAATTGAATAGAGGTAAAAGTGGTGGATAAAAGTTCAAAATGTTAATCTTATAAAGAATATGTTGCAGTTGCTCCTTAGCAGTCATCTTAATCTTGATAAAGAGCCTGTTTGGGAATATAAATATATCCTTGGAATTGCCCGTTTTGATTAACAATTTGATATGTCCCCATAAGGGTCGATTCCCAATCTCCCCTGATGTAGTCTTTCATAGTAAAATTTGATCGTATGCGCATTATAACTTGTGCTTTGGTCAAGTGTTTTGTGTAATGGAGCAAATAGCTGCTCTAATTAATTTGGCATAAACATTTTCTAAATGATTTATTCTCGTCTCTGGTAAGATGTTTAATCTGCTTTGTTTGGTTCTTACTTCTGTAATGTTTTGATGCGTTTAGGAGAAAGAAAAAGAGAGTTGGGAAACCACCTGCCATTCACTCAGAACAAAGCTGGAGATTGCTGAGAGTAACTGCATCCGTGCCGAGATTGAAGCGGCCAAATTTAGAAGTATAATTCTGTATACTGGTTAGTTACCTTGTTTAGGCGATGAATTTGGAGCTCATACTTGTATTGACATTGTAGGTCAACTGGAGTCACAGTTATCTGCTCAGTCCCAGGTATTAAACTCAAAAGAGGCTGAATTGATGGCGGCCAAAGAAGAGGTGATCTCTTATTTAACTTATCTGTATTTCTCCTCTCACAAATGTTTAGGCCCCATTTGTTTTTATAAGATTATGACGTCGTAATGTGTATACACGTTTAGATATTTAATATTGTATCTAGATCTTAACGCTGAAAAACTAACATTGTTTTTTCAGCATCTGAATGTGGATAATTTATCTTTATTTTAAAGCTAATTAATAGATAGAATTTCAAGTAAATTACTACGAATAAATTTGTATCCACAAAATGTTGGAAAATGTTTATTTACGGGGAGTTAAATAAATTTTTTATTTGATGAATCATACTCTAAAAAAAACTAGAAAGAAAGGTAGGTGGTGATCGGCAATAATAGTTGTAAGGTGGTGGTGGTCATGATTGTATTGGGGAGATTGCCTATGATGGTTGTGCAATGGTGTCCGGTTTTGGTCAGATAGAAGTTAGTGGTAGAGGTGGTTGGTACTGGTGGTTTGCGAAGGAGGCGGTTAGTGGTGGTGACTAGTTGTGAAGGTGCTTGGTGATTGTGGTGGTGACCGGCTATGGTGGTTGCGCAATGGAGGCTGGTGGTGGAGGTAATTGGTTAGTGGCAGTAGTTGACTGTTGTGGAGATGGTTAGTCGTTGGTATCAATGCATATAGAACTTGTATTGATGTCTAGATATCGAGATCCTCCTGAGGTGACAGATTAATTGGATATTGGCATTCTCCCAACTTCTTGGCAAAAAGATTATATATCAATTGGATCTATGCACTTCTCTTATTTTCTTCTTGAAATATGTGCACCAATTGCATATTTGACATTTTACTAAAGGAATCATTTGAAGCAAGAAAAGAAACAAAGAATCTGCAAGTGACACATATAATTTTTTTCGCCTTGACTGTATGGTATATACTGATTTAAAGTTATTGAGACTTCAGGTAAAGATTTTTCTTCCAGTTGCTAGACTGTGCAATGATAGAATCTGGCAAGTTTAGGATGTTGAATGGCTCTTTTTAAGATTAATCTAGGATGCTGAATAGTGTGCCATTGACTTCAATTATTCCTTAAGAGTTTGGTACTAGGGAGTTTGTTGCATGAAAAGTGGCTAATATAATTATGGGAAAGAAGTAGCAAAGGTTGACACAAATATTCTTTGTTTTATGTATCTCATGATTTTCTCTTCAATGGTCACTTGCAGATCAATCGCACTCAAAGTGAGTTTTCATCTTACAAGGCTCGTGCTCACGCACTTCTCCAGCGAAAGGATGCTGAATTGGCTGCTGCTAGGGACAGCGAACAACTTAAAGCACTGGAGGAAGCATTGAAGGTATATGCTTTTGGGTGTAACTAGTGAAATGCTTTGGCTTAATAGTTTAACATTAAGGTCATTTAATTGTTGCTAAGACATCAAAAAATTTGCTCTTTCAGGAAGTGGAGAAAGAGGTAATGTCAGTCTCTTCTGAAAGGGATAGAGCCCTTCAAGATCTAAAGAGCACCTTAATTAATCATGAGAAGGAACTTTCGGACAGGTAATCTGAGTTTGATGACTTGTTAGATGTTCACCTGAACACAAATTATACGCAGTTCATTTTTGGGGTGTTTTTTCACAGATTAAACTCACAAACATTGACATGGACACACTCTTCAGTTCATTTACACCCTCGGGCAAAATAGTTTTAAATCTAACTTGTAGTAGTACAGAGTTTTTACAGATTTGATGTAGCTTTCATTTGCTGAAAGAGAATGAATTGACACACTTCTCCATTAAATCATTTCCAGAGATGAAGCTCTTCGTGCTACAGAGCAACGGATCAGAAGCATGGAAATGAAGTTCAATTCTGCTATTTCTGCTCACCAAAAAGAGAAGGAAGCATGGGAAATAAGCCTTCAAAATGTAGAAGAAACATGGCGATGTAATTTCTTAGGATGATATAATAATCAGCTTTCTATTCTTGAATTGCCATTTATTCAGCTTCCAAATGGAAAACTAATTCTAGATACTGCTTTGCAGTGAAATGTGATGCATTTAAAGCAGAGAGTGTGGTTACCTCTGGTGATAATGTTCAAAAAGAACTAGATGACCTCAAACAAAGCTGTAAAAAACTGAAGGTGTGATTTATAATTATCAATATCATCATAACACTTTTTAGTTTGGTGACACTGAGTTCTTTAACTTGTAGGAAGAGCTTGATTCTTTTCGTGACCTTGCTGATAAGATGATTGAGGAGAAGGACAATGAAATCTCTAGACTTCTAGACGATAACGAGAACCTTCGCCACAAACTTCAGTCTGAATTTTTAGTAAGTGTGGAGCAGTCTCCAATCACCTATTCATGAATCTGCTTGAGCAATCACCTAGTTAACATGTGTATTTAAGCATTCTTTTAAAATTGTGATTTTTCTTCTGCAAATATCAGGCCGATCGCAATGGCAATTCCAATACAGGTATGAAGATCTTCAGCACCTTTTAGCTTATTCTACAGTTCAAAATGATATTCTTTGATAGCTGCTTCAGTGACTAATATTGCTCTTTGAAATGATTGTACAGTATATGACAAGCAAGATCCTCTGAATTCGACTACCTCAGCTGCTGATCAGCAGATTCTGGTATGGACAATTTTCTAGTTACATTACTGTGCAATATTTTCATCAGTTACTGCAAAGGGGAAAAAGAAAATCAAAGAATGAGACAGAGATTAGTACAAGGGGCAACAGTTTTAAAGTCCAACCCAAACATGGTCTGGCATGCTTTATGCTTTAGACATGTCCTTTTTCGCCTTAATATACACCATCGGGACACCTTTAGCCTCCAAACGCCTCAAGAGAACATCCCTTGGGACTTTGTCATAGGCCTTTTCAAGGTCAATGAACGCCATATGAAAGTCCCTCTTCCTTTCAATATACTTCTCCACCAATCTCCGCACAAGGTGGATGGCTTCAGTAGTCGAAATCCCCGGCATGAACCCAAATTGATCCTCAATAATGGACACTCCTTTACTGTTACCTTCTCAAAAAAAAAAAAAAAATTGACACTCCTTTCCTCACCCTCATCTCCTCTACTCTCTCCGAGACCTTCGTAGTGTGGCTTAACAATTCGATACCCCTCTAATTGTTATAGTTTGGATATCACCGTCGTTCTTGTACAATGGAACCATTATACTTCATCTCCACTCGTCGGGCATTTTTTTCCGTCTTGAAAATAGTATTAAACTACCCAGTCAAAACCACTCGACACCTGCTTATCTGTTATATATATGAAAGAAAAAAAAGTAGTATTTGAAGTAAAGTCGAAAAAGAATATTTGGAAATTGAAGTCGTCTCTGGACATGCATTTAACCTGGGAAAAAGTTGAAATTTTGTGAATGGATGTGGGTTTTCACTTTAATTTAAAAAACCCATCTTCAATTTTTTCCAGAAAATCAGTCCAATGTATAACTAAACAGTGATTTGAAAGAAATATAATGAAAAAAAGGAAAAATAATCCGTGGACAAACCGCTCCTTAGTTAAGAACATTAGTTTTTAGCATTCAGAGACTTCATTTCTGTCTCACGCCACTACTTAAAACTTCTTGACGCTTCAGGTCTTGGCGAGACAACAAGCACAAAGAGAAGAAGAGCTTGCTCAGTCACAACGTCACATTCTAGCCCTTCAAGTAAGTTATTTGCTCCGAGAACATCAATATTCTTTAGAGATAGTTCCCTCATTAGAGTCTGATGTCTTGATTCAGGAGGAGATAGAAGAGCTTGAACGTGAAAATCGTCTCCACAGCCAGCAGGTATGTCTTTAAATAAAAGTCATGTGTCTGTCATGGCTAATTCTCTTCTTTCTTAGGGACTGGAGGGTGGCTTGAGTTGTTTAGCCATGGGCATAATGTTTGAGTGGGCTTAGGCAGCTGGTTCTTGGCTTAGACAATCATATACTATGCTGTCCTTTTACTTGGACTTCTTCTGATTTGTATTCCCTTACAAGTTTGCCTTAATGAGTGCAGGAAGCTAAGTTGAAAGAGGAGCTTAGGAATATGGATAGATCACAGAAGAGGGAAGGGGTAGATCTGACGTATCTTAAGAATGTCATTTTAAAACTTCTCGAGACAGGTAACTTTTCAGTGTTGCAGTGAAAAGGTTTAAAATTCAGGATTTTTTTAGTTGAACTAAATGCTTCCGTAGGAAATTATTTACATCATAAGTTGCTTGTGATAAATATTTCACAGGTGAAGTGGAGGCTCTATTACCTGTGGTTGCAATGCTTCTTCAGTTCAGTCCTGAGGAGGTGATGTTCTTGTTTCCAGTAGTAAACTACTGTTTTCATTTCTAAAATATTGGTGATCGTTATGACAATATATCTCAGTAATATTCATGAATCTATTAGGCCTACTCCGTTAAAATAAATACATTTAAGACTTATTGTGACATGGTACCTTTTAGCTCATATGGCAAGAGCAGGTGTATGTATTTGCACTGCAGGTATAGAGAACTTAATTAATCATCTTATTTTGCTATTAATTGCAAAATCTGGTTCTATCAAATGATTAGAAATTGAAAATGTGCTATAACTTTATTAGATTTCAAATAAATTAAATTGGAAGGCATATGCAGACAAATCTTTTTGTATTTATCGTTCTCATGCTGATATCTGTTGATTATGATATATCAATAGTGAGTAAATGTATTAGAGTGTAATGTAACCTGAAAATCTCATGAGTCTACTGATGCATTTGCAGATGCGGAAGTGCCAACAAGCCTATCGCTCCTCCATAGAAGCTCAAGCAAGCCCGTCAAAAGATACATCAGGATCGGGGAGCTCACTGTTTTCTAGATTCTCATTCTCTTAACAGCCAATGAGGGCTGCAGAGATGCTTCCCAAATGTTGTCTTATCCAGCTTCAGTAGATAGTCTGTAGCAGACGTGGAAGGAGAGATACAGTAGAGGAATGTTTTGTGTTCTTATGTAATTAACAAAGAAATGCAAAAGAAGAACAAAACACAAAAAATGAGTAGGCATCCCTTGTCGTTCTTCACACGATATGTATATCAAAGGTATTTCGTTCTTCCTTTTTTTGTTTAATTGAGTGCAGAGAGAGAAGGAAGAGCACATTTGATAGAAATTGTAAAATTTTTGCGTAAGGAAACC</genome_strand>
        <mrna_strand>TTGAATAGAG-ACTTTTAGAGAAAAAGCAGACACGAGGTGCTGCAGAGGTAGCACTAAAGCATCTTCAAACTCTA-ATTTGGAAGCTGACACAAAGGCCCAAGAGTTGTCTGTCAAAGTTGCTGAAG..........................................................................................................................................................................................................TACAAAATAAGATGGATCAGGAAATAAAAGAACGTGATGAGAAGTACTCAGAGCTAGACTCGAAGTTCAACAGACTTCACAAACGGGCAAAGCAGCGTATTCAAGAGGTGCAAAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAAAGATGATCTTGAGGCCCAGTTTCGTGATGTCAATGAGAAATCTGAGCGCGCATCCTCGCAATTATCTGCATTGCAGCAAGAGTTGGAGCGCAGTAGACAACACGCTCAGGAGGCACTGAAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGCCCGTCAAAAGATACATCAGGATCGGGGAGCTCACTGTTTTCTAGATTCTCATTCTCTTAACAGCCAATGAGGGCTGCAGAGATGCTTCCCAAATGTTGTCTTATCCAGCTTCAGTAGATAGTCTGTAGCAGACGTGGAAGGAGAGATACAGTAGAGGAATGTTTTGTGTTCTTATGTAATTAACAAAGAAATGCAAAAGAAGAACAAAACACAAAAAATGAGTAGGCATCCCTTGTCGTTCTTCACACGATATGTATATCAAAGGTATTTCGTTCTTCCTTTTTTTGTTTAATTGAGTGCAGAGAGAGAAGGAAGAGCACATTTGATAGAAATTGTAAAATTTTTGCGTAAGGAAACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0031D11-98q2S/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U586458" ref_strand="+" ref_description="SGN-U586458 Tomato 200607#2 [5 ESTs aligned] (*GB) gi|157328874|emb|CAO23277.1| (e_value=2e-108) unnamed; (*ATH) AT5G66030.1 (e_value=4e-96) | Symbol: None | Golgi-localized GRIP domain-containing protein, contains Pfam profile PF01465: GRIP domain; supporting cDNA gi:20303028:gb:AF499634.1: | chr5:26422147-26427114 REVERSE | Aliases: K2A18.10, K2A18_10; ">
      <seq>ctgccattcactcagaacaaagctggagattgctgagagtaactgcatccgtgccgagattgaagcggccaaatttagaagtcaactggagtcacagttatctgctcagtcccaggtattaaactcaaaagaggctgaattgatggcggccaaagaagagatcaatcgcactcaaagtgagttttcatcttacaaggctcgtgctcacgcacttctccagcgaaaggatgctgaattggctgctgctagggacagcgaacaacttaaagcactggaggaagcattgaaggaagtggagaaagaggtaatgtcagtctcttctgaaagggatagagcccttcaagatctaaagagcaccttaattaatcatgagaaggaactttcggacagagatgaagctcttcgtgctacagagcaacggatcagaagcatggaaatgaagttcaattctgctatttctgctcaccaaaaagagaaggaagcatgggaaataagccttcaaaatgtagaagaaacatggcgattgaaatgtgatgcatttaaagcagagagtgtggttacctctggtgataatgttcaaaaagaactagatgacctcaaacaaagctgtaaaaaactgaaggaagagcttgattcttttcgtgaccttgctgataagatgattgaggagaaggacaatgaaatctctagacttctagacgataacgagaaccttcgccacaaacttcagtctgaatttttagccgatcgcaatggcaattccaatacagtatatgacaagcaagatcctctgaattcgactacctcagctgctgatcagcagattctggtcttggcgagacaacaagcacaaagagaagaagagcttgctcagtcacaacgtcacattctagcccttcaagaggagatagaagagcttgaacgtgaaaatcgtctccacagccagcaggaagctaagttgaaagaggagcttaggaatatggatagatcacagaagagggaaggggtagatctgacgtatcttaagaatgtcattttaaaacttctcgagacaggtgaagtggaggctctattacctgtggttgcaatgcttcttcagttcagtcctgaggagatgcggaagtgccaacaagcctatcgctcctccatagaagctcaagcaagcccgtcaaaagatacatcangatcggggagctca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0031D11-98q2S/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0031D11.1" temp_strand="-" temp_description="C02SLe0031D11.1  AC215451.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0031D11 sequenced_by:kribb upload_account_name:korea">
        <position start="30263" stop="24648"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29963" g_stop="29884" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="80" r_length="80" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29883" i_stop="29809" i_length="75">
            <donor d_prob="0.418" d_score="1.00"/>
            <acceptor a_prob="0.889" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29808" g_stop="29729" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="81" r_stop="160" r_length="80" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="29728" i_stop="28554" i_length="1175">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="28553" g_stop="28425" g_length="129"/>
          <reference_exon_boundary r_type="cDNA" r_start="161" r_stop="289" r_length="129" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="28424" i_stop="28324" i_length="101">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.867" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="28323" g_stop="28223" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="290" r_stop="390" r_length="101" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="28222" i_stop="27973" i_length="250">
            <donor d_prob="0.895" d_score="1.00"/>
            <acceptor a_prob="0.903" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="27972" g_stop="27839" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="391" r_stop="524" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="27838" i_stop="27741" i_length="98">
            <donor d_prob="0.678" d_score="1.00"/>
            <acceptor a_prob="0.969" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="27740" g_stop="27643" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="525" r_stop="622" r_length="98" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="27642" i_stop="27572" i_length="71">
            <donor d_prob="0.911" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="27571" g_stop="27452" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="623" r_stop="742" r_length="120" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="27451" i_stop="27336" i_length="116">
            <donor d_prob="0.222" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="27335" g_stop="27308" g_length="28"/>
          <reference_exon_boundary r_type="cDNA" r_start="743" r_stop="770" r_length="28" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="27307" i_stop="27205" i_length="103">
            <donor d_prob="1.000" d_score="0.00"/>
            <acceptor a_prob="0.924" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="27204" g_stop="27146" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="771" r_stop="829" r_length="59" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="27145" i_stop="26172" i_length="974">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.749" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="26171" g_stop="26100" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="830" r_stop="901" r_length="72" r_score="1.000"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="26099" i_stop="26025" i_length="75">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.227" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="26024" g_stop="25977" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="902" r_stop="949" r_length="48" r_score="1.000"/>
        </exon>
        <intron i_serial="11">
          <gDNA_intron_boundary i_start="25976" i_stop="25764" i_length="213">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="12">
          <gDNA_exon_boundary g_start="25763" g_stop="25658" g_length="106"/>
          <reference_exon_boundary r_type="cDNA" r_start="950" r_stop="1055" r_length="106" r_score="1.000"/>
        </exon>
        <intron i_serial="12">
          <gDNA_intron_boundary i_start="25657" i_stop="25542" i_length="116">
            <donor d_prob="0.926" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="13">
          <gDNA_exon_boundary g_start="25541" g_stop="25483" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="1056" r_stop="1114" r_length="59" r_score="1.000"/>
        </exon>
        <intron i_serial="13">
          <gDNA_intron_boundary i_start="25482" i_stop="25032" i_length="451">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="14">
          <gDNA_exon_boundary g_start="25031" g_stop="24948" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="1115" r_stop="1198" r_length="84" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0031D11.1" gen_strand="-" ref_id="SGN-U586458" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>1198</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0031D11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U586458" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29963" e_stop="29884"/>
          <exon e_start="29808" e_stop="29729"/>
          <exon e_start="28553" e_stop="28425"/>
          <exon e_start="28323" e_stop="28223"/>
          <exon e_start="27972" e_stop="27839"/>
          <exon e_start="27740" e_stop="27643"/>
          <exon e_start="27571" e_stop="27452"/>
          <exon e_start="27335" e_stop="27308"/>
          <exon e_start="27204" e_stop="27146"/>
          <exon e_start="26171" e_stop="26100"/>
          <exon e_start="26024" e_stop="25977"/>
          <exon e_start="25763" e_stop="25658"/>
          <exon e_start="25541" e_stop="25483"/>
          <exon e_start="25031" e_stop="24948"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGCCATTCACTCAGAACAAAGCTGGAGATTGCTGAGAGTAACTGCATCCGTGCCGAGATTGAAGCGGCCAAATTTAGAAGTATAATTCTGTATACTGGTTAGTTACCTTGTTTAGGCGATGAATTTGGAGCTCATACTTGTATTGACATTGTAGGTCAACTGGAGTCACAGTTATCTGCTCAGTCCCAGGTATTAAACTCAAAAGAGGCTGAATTGATGGCGGCCAAAGAAGAGGTGATCTCTTATTTAACTTATCTGTATTTCTCCTCTCACAAATGTTTAGGCCCCATTTGTTTTTATAAGATTATGACGTCGTAATGTGTATACACGTTTAGATATTTAATATTGTATCTAGATCTTAACGCTGAAAAACTAACATTGTTTTTTCAGCATCTGAATGTGGATAATTTATCTTTATTTTAAAGCTAATTAATAGATAGAATTTCAAGTAAATTACTACGAATAAATTTGTATCCACAAAATGTTGGAAAATGTTTATTTACGGGGAGTTAAATAAATTTTTTATTTGATGAATCATACTCTAAAAAAAACTAGAAAGAAAGGTAGGTGGTGATCGGCAATAATAGTTGTAAGGTGGTGGTGGTCATGATTGTATTGGGGAGATTGCCTATGATGGTTGTGCAATGGTGTCCGGTTTTGGTCAGATAGAAGTTAGTGGTAGAGGTGGTTGGTACTGGTGGTTTGCGAAGGAGGCGGTTAGTGGTGGTGACTAGTTGTGAAGGTGCTTGGTGATTGTGGTGGTGACCGGCTATGGTGGTTGCGCAATGGAGGCTGGTGGTGGAGGTAATTGGTTAGTGGCAGTAGTTGACTGTTGTGGAGATGGTTAGTCGTTGGTATCAATGCATATAGAACTTGTATTGATGTCTAGATATCGAGATCCTCCTGAGGTGACAGATTAATTGGATATTGGCATTCTCCCAACTTCTTGGCAAAAAGATTATATATCAATTGGATCTATGCACTTCTCTTATTTTCTTCTTGAAATATGTGCACCAATTGCATATTTGACATTTTACTAAAGGAATCATTTGAAGCAAGAAAAGAAACAAAGAATCTGCAAGTGACACATATAATTTTTTTCGCCTTGACTGTATGGTATATACTGATTTAAAGTTATTGAGACTTCAGGTAAAGATTTTTCTTCCAGTTGCTAGACTGTGCAATGATAGAATCTGGCAAGTTTAGGATGTTGAATGGCTCTTTTTAAGATTAATCTAGGATGCTGAATAGTGTGCCATTGACTTCAATTATTCCTTAAGAGTTTGGTACTAGGGAGTTTGTTGCATGAAAAGTGGCTAATATAATTATGGGAAAGAAGTAGCAAAGGTTGACACAAATATTCTTTGTTTTATGTATCTCATGATTTTCTCTTCAATGGTCACTTGCAGATCAATCGCACTCAAAGTGAGTTTTCATCTTACAAGGCTCGTGCTCACGCACTTCTCCAGCGAAAGGATGCTGAATTGGCTGCTGCTAGGGACAGCGAACAACTTAAAGCACTGGAGGAAGCATTGAAGGTATATGCTTTTGGGTGTAACTAGTGAAATGCTTTGGCTTAATAGTTTAACATTAAGGTCATTTAATTGTTGCTAAGACATCAAAAAATTTGCTCTTTCAGGAAGTGGAGAAAGAGGTAATGTCAGTCTCTTCTGAAAGGGATAGAGCCCTTCAAGATCTAAAGAGCACCTTAATTAATCATGAGAAGGAACTTTCGGACAGGTAATCTGAGTTTGATGACTTGTTAGATGTTCACCTGAACACAAATTATACGCAGTTCATTTTTGGGGTGTTTTTTCACAGATTAAACTCACAAACATTGACATGGACACACTCTTCAGTTCATTTACACCCTCGGGCAAAATAGTTTTAAATCTAACTTGTAGTAGTACAGAGTTTTTACAGATTTGATGTAGCTTTCATTTGCTGAAAGAGAATGAATTGACACACTTCTCCATTAAATCATTTCCAGAGATGAAGCTCTTCGTGCTACAGAGCAACGGATCAGAAGCATGGAAATGAAGTTCAATTCTGCTATTTCTGCTCACCAAAAAGAGAAGGAAGCATGGGAAATAAGCCTTCAAAATGTAGAAGAAACATGGCGATGTAATTTCTTAGGATGATATAATAATCAGCTTTCTATTCTTGAATTGCCATTTATTCAGCTTCCAAATGGAAAACTAATTCTAGATACTGCTTTGCAGTGAAATGTGATGCATTTAAAGCAGAGAGTGTGGTTACCTCTGGTGATAATGTTCAAAAAGAACTAGATGACCTCAAACAAAGCTGTAAAAAACTGAAGGTGTGATTTATAATTATCAATATCATCATAACACTTTTTAGTTTGGTGACACTGAGTTCTTTAACTTGTAGGAAGAGCTTGATTCTTTTCGTGACCTTGCTGATAAGATGATTGAGGAGAAGGACAATGAAATCTCTAGACTTCTAGACGATAACGAGAACCTTCGCCACAAACTTCAGTCTGAATTTTTAGTAAGTGTGGAGCAGTCTCCAATCACCTATTCATGAATCTGCTTGAGCAATCACCTAGTTAACATGTGTATTTAAGCATTCTTTTAAAATTGTGATTTTTCTTCTGCAAATATCAGGCCGATCGCAATGGCAATTCCAATACAGGTATGAAGATCTTCAGCACCTTTTAGCTTATTCTACAGTTCAAAATGATATTCTTTGATAGCTGCTTCAGTGACTAATATTGCTCTTTGAAATGATTGTACAGTATATGACAAGCAAGATCCTCTGAATTCGACTACCTCAGCTGCTGATCAGCAGATTCTGGTATGGACAATTTTCTAGTTACATTACTGTGCAATATTTTCATCAGTTACTGCAAAGGGGAAAAAGAAAATCAAAGAATGAGACAGAGATTAGTACAAGGGGCAACAGTTTTAAAGTCCAACCCAAACATGGTCTGGCATGCTTTATGCTTTAGACATGTCCTTTTTCGCCTTAATATACACCATCGGGACACCTTTAGCCTCCAAACGCCTCAAGAGAACATCCCTTGGGACTTTGTCATAGGCCTTTTCAAGGTCAATGAACGCCATATGAAAGTCCCTCTTCCTTTCAATATACTTCTCCACCAATCTCCGCACAAGGTGGATGGCTTCAGTAGTCGAAATCCCCGGCATGAACCCAAATTGATCCTCAATAATGGACACTCCTTTACTGTTACCTTCTCAAAAAAAAAAAAAAAATTGACACTCCTTTCCTCACCCTCATCTCCTCTACTCTCTCCGAGACCTTCGTAGTGTGGCTTAACAATTCGATACCCCTCTAATTGTTATAGTTTGGATATCACCGTCGTTCTTGTACAATGGAACCATTATACTTCATCTCCACTCGTCGGGCATTTTTTTCCGTCTTGAAAATAGTATTAAACTACCCAGTCAAAACCACTCGACACCTGCTTATCTGTTATATATATGAAAGAAAAAAAAGTAGTATTTGAAGTAAAGTCGAAAAAGAATATTTGGAAATTGAAGTCGTCTCTGGACATGCATTTAACCTGGGAAAAAGTTGAAATTTTGTGAATGGATGTGGGTTTTCACTTTAATTTAAAAAACCCATCTTCAATTTTTTCCAGAAAATCAGTCCAATGTATAACTAAACAGTGATTTGAAAGAAATATAATGAAAAAAAGGAAAAATAATCCGTGGACAAACCGCTCCTTAGTTAAGAACATTAGTTTTTAGCATTCAGAGACTTCATTTCTGTCTCACGCCACTACTTAAAACTTCTTGACGCTTCAGGTCTTGGCGAGACAACAAGCACAAAGAGAAGAAGAGCTTGCTCAGTCACAACGTCACATTCTAGCCCTTCAAGTAAGTTATTTGCTCCGAGAACATCAATATTCTTTAGAGATAGTTCCCTCATTAGAGTCTGATGTCTTGATTCAGGAGGAGATAGAAGAGCTTGAACGTGAAAATCGTCTCCACAGCCAGCAGGTATGTCTTTAAATAAAAGTCATGTGTCTGTCATGGCTAATTCTCTTCTTTCTTAGGGACTGGAGGGTGGCTTGAGTTGTTTAGCCATGGGCATAATGTTTGAGTGGGCTTAGGCAGCTGGTTCTTGGCTTAGACAATCATATACTATGCTGTCCTTTTACTTGGACTTCTTCTGATTTGTATTCCCTTACAAGTTTGCCTTAATGAGTGCAGGAAGCTAAGTTGAAAGAGGAGCTTAGGAATATGGATAGATCACAGAAGAGGGAAGGGGTAGATCTGACGTATCTTAAGAATGTCATTTTAAAACTTCTCGAGACAGGTAACTTTTCAGTGTTGCAGTGAAAAGGTTTAAAATTCAGGATTTTTTTAGTTGAACTAAATGCTTCCGTAGGAAATTATTTACATCATAAGTTGCTTGTGATAAATATTTCACAGGTGAAGTGGAGGCTCTATTACCTGTGGTTGCAATGCTTCTTCAGTTCAGTCCTGAGGAGGTGATGTTCTTGTTTCCAGTAGTAAACTACTGTTTTCATTTCTAAAATATTGGTGATCGTTATGACAATATATCTCAGTAATATTCATGAATCTATTAGGCCTACTCCGTTAAAATAAATACATTTAAGACTTATTGTGACATGGTACCTTTTAGCTCATATGGCAAGAGCAGGTGTATGTATTTGCACTGCAGGTATAGAGAACTTAATTAATCATCTTATTTTGCTATTAATTGCAAAATCTGGTTCTATCAAATGATTAGAAATTGAAAATGTGCTATAACTTTATTAGATTTCAAATAAATTAAATTGGAAGGCATATGCAGACAAATCTTTTTGTATTTATCGTTCTCATGCTGATATCTGTTGATTATGATATATCAATAGTGAGTAAATGTATTAGAGTGTAATGTAACCTGAAAATCTCATGAGTCTACTGATGCATTTGCAGATGCGGAAGTGCCAACAAGCCTATCGCTCCTCCATAGAAGCTCAAGCAAGCCCGTCAAAAGATACATCAGGATCGGGGAGCTCA</genome_strand>
        <mrna_strand>CTGCCATTCACTCAGAACAAAGCTGGAGATTGCTGAGAGTAACTGCATCCGTGCCGAGATTGAAGCGGCCAAATTTAGAA...........................................................................GTCAACTGGAGTCACAGTTATCTGCTCAGTCCCAGGTATTAAACTCAAAAGAGGCTGAATTGATGGCGGCCAAAGAAGAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAATCGCACTCAAAGTGAGTTTTCATCTTACAAGGCTCGTGCTCACGCACTTCTCCAGCGAAAGGATGCTGAATTGGCTGCTGCTAGGGACAGCGAACAACTTAAAGCACTGGAGGAAGCATTGAAG.....................................................................................................GAAGTGGAGAAAGAGGTAATGTCAGTCTCTTCTGAAAGGGATAGAGCCCTTCAAGATCTAAAGAGCACCTTAATTAATCATGAGAAGGAACTTTCGGACAG..........................................................................................................................................................................................................................................................AGATGAAGCTCTTCGTGCTACAGAGCAACGGATCAGAAGCATGGAAATGAAGTTCAATTCTGCTATTTCTGCTCACCAAAAAGAGAAGGAAGCATGGGAAATAAGCCTTCAAAATGTAGAAGAAACATGGCGAT..................................................................................................TGAAATGTGATGCATTTAAAGCAGAGAGTGTGGTTACCTCTGGTGATAATGTTCAAAAAGAACTAGATGACCTCAAACAAAGCTGTAAAAAACTGAAG.......................................................................GAAGAGCTTGATTCTTTTCGTGACCTTGCTGATAAGATGATTGAGGAGAAGGACAATGAAATCTCTAGACTTCTAGACGATAACGAGAACCTTCGCCACAAACTTCAGTCTGAATTTTTA....................................................................................................................GCCGATCGCAATGGCAATTCCAATACAG.......................................................................................................TATATGACAAGCAAGATCCTCTGAATTCGACTACCTCAGCTGCTGATCAGCAGATTCTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTTGGCGAGACAACAAGCACAAAGAGAAGAAGAGCTTGCTCAGTCACAACGTCACATTCTAGCCCTTCAA...........................................................................GAGGAGATAGAAGAGCTTGAACGTGAAAATCGTCTCCACAGCCAGCAG.....................................................................................................................................................................................................................GAAGCTAAGTTGAAAGAGGAGCTTAGGAATATGGATAGATCACAGAAGAGGGAAGGGGTAGATCTGACGTATCTTAAGAATGTCATTTTAAAACTTCTCGAGACAG....................................................................................................................GTGAAGTGGAGGCTCTATTACCTGTGGTTGCAATGCTTCTTCAGTTCAGTCCTGAGGAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCGGAAGTGCCAACAAGCCTATCGCTCCTCCATAGAAGCTCAAGCAAGCCCGTCAAAAGATACATCANGATCGGGGAGCTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0031D11-98q2S/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U586457" ref_strand="+" ref_description="SGN-U586457 Tomato 200607#2 [5 ESTs aligned] (*GB) gi|30698180|ref|NP_569025.2| (e_value=2e-31) Golgi-localized protein GRIP [Arabidopsis thaliana]; (*ATH) AT5G66030.2 (e_value=2e-33) | Symbol: None | Golgi-localized GRIP domain-containing protein, contains Pfam profile PF01465: GRIP domain; supporting cDNA gi:20303028:gb:AF499634.1: | chr5:26422147-26427114 REVERSE | Aliases: None; ">
      <seq>tcgagtttttctttctcgattgatagatactcttctcaataaagggatttatttagtattagacaccgtttcactctttttgccgcttggacattttacaagcatctagatctgcagttccccactgcttcatccatattacttctcagttgatggatgaaacagtttaatccctacttctcagaagctaaagaggaaataatggagggagatattagtagtggggctgcagataatcacacggaagatgctagcaaaacagaggcacagttcaatagcttcaatattgagagtgatcatgtaaaggataacggaatatgtgagagtcacgaacatacaggtgatagccatgatgatcttgtacaaatgctcgtagaacttaatttccagaatgaatatctgaaatctcagattgtgggatggcaaagcatcaacatatattctgatgactctggtcaacaaattaaaacggctgcacatgaaaatgtggcaagtgataattcagaagaccttaatgagaagatcgaatctttgaatagagaacttttagaggaaaagcaaacacgaggtgctgcagaggtagcactaaagcatcttcaaactctatatttggaagctgacacaaaggcccaagagttgtctgtcaaagttgctgaagtacaaaataagatggatcaggaaataaaagaacgtgatgagaagtactcagagctagactcgaaagtcaacagacttcacaaacgggcaaagcagcgtattcaagaagtgcaaaaggaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0031D11-98q2S/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0031D11.1" temp_strand="-" temp_description="C02SLe0031D11.1  AC215451.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0031D11 sequenced_by:kribb upload_account_name:korea">
        <position start="36244" stop="34093"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="35944" g_stop="35795" g_length="150"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="149" r_length="149" r_score="0.987"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="35794" i_stop="35224" i_length="571">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35223" g_stop="34715" g_length="509"/>
          <reference_exon_boundary r_type="cDNA" r_start="150" r_stop="658" r_length="509" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="34714" i_stop="34513" i_length="202">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.945" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34512" g_stop="34397" g_length="116"/>
          <reference_exon_boundary r_type="cDNA" r_start="659" r_stop="774" r_length="116" r_score="0.974"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0031D11.1" gen_strand="-" ref_id="SGN-U586457" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>775</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0031D11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U586457" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="35944" e_stop="35795"/>
          <exon e_start="35223" e_stop="34715"/>
          <exon e_start="34512" e_stop="34397"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGAGATTTTTCTTTCTCGATTGATAGATACTCTTCTCAATAAAGGGATTTATTTAGTATTAGACACCGTTTCACTCTTTTTGCCGCTTGGACATTTTACAAGCATCTAGATCTGCAGTTCCCCACTGCTTCATCCATATTACTTCTCAGGTCAGCCCTTTTAATGCTTTTCAATTGTATCTAAAATGATGCTTTCTGCATACATTTTTTCTGTTGTGTTAGTGCATTGCTAAAATTTAGTTAATCGTAGGATCTGATTGATACTGTAATCTGCACCTCTTTAATTTCATTGCACCAGAAATGTGAATTTAACTGTTGAAGTAAGCCTGAATTTCTCTTATCCAATTTTCTCGAATTTCATTTTCTTTGCGAAACTGGTGATAAACCTCAACTGCCATCGGGTTTTCTGGAAAAAAAAATGGAGGAGGGGGCAATTTCTACTAAAGCTACATTGGTGTGATCAATGTGAGGTGGGTGATACAGAGAGAGTCTATTATGATGTTTTGAATCTTGTACTAGCTTCGGGTTAATCAAATTAGCTTGACGGTGGATCTTGCTATAAAACTTTTATTTACTTACCAGAATTTGGCATTCAAATGTTGATATTTTTGAAGCCAATGTTTGTGTCTTTTTATCTCGATTCTTTAATTTCAATGCGGAGTTGCGTGATCCATATTAGTGGATTATTTATTTTGTGTTTTGTGATGGTTACTTATTGCAGTTGATGGATGAAACAGTTTAATCCCTACTTCTCAGAAGCTAAAGAGGAAATAATGGAGGGAGATATTAGTAGTGGGGCTGCAGATAATCACACGGAAGATGCTAGCAAAACAGAGGCACAGTTCAATAGCTTCAATATTGAGAGTGATCATGTAAAGGATAACGGAATATGTGAGAGTCACGAACATACAGGTGATAGCCATGATGATCTTGTACAAATGCTCGTAGAACTTAATTTCCAGAATGAATATCTGAAATCTCAGATTGTGGGATGGCAAAGCATCAACATATATTCTGATGACTCTGGTCAACAAATTAAAACGGCTGCACATGAAAATGTGGCAAGTGATAATTCAGAAGACCTTAATGAGAAGATCGAATCTTTGAATAGAGAACTTTTAGAGGAAAAGCAAACACGAGGTGCTGCAGAGGTAGCACTAAAGCATCTTCAAACTCTATATTTGGAAGCTGACACAAAGGCCCAAGAGTTGTCTGTCAAAGTTGCTGAAGGTTGTGATTTGCTTTGACTTCCATTTTCTTCTTCATGTTTGTTGAATTCAACATCAATATGGAACTCGGATTTTATGATAAGTTCTAAATGTTGGTGATGTACTTCCATTGTTAGTTGCAGATTTTTTGGTTTTCCTTTTTTAGTTTCAGTTGACAAAGAAGATATGCTATTCTGAAGTCTATAAATGGTTTGTTTGAATAGTACAAAATAAGATGGATCAGGAAATAAAAGAACGTGATGAGAAGTACTCAGAGCTAGACTCGAAGTTCAACAGACTTCACAAACGGGCAAAGCAGCGTATTCAAGAGGTGCAAAAG</genome_strand>
        <mrna_strand>TCGAG-TTTTTCTTTCTCGATTGATAGATACTCTTCTCAATAAAGGGATTTATTTAGTATTAGACACCGTTTCACTCTTTTTGCCGCTTGGACATTTTACAAGCATCTAGATCTGCAGTTCCCCACTGCTTCATCCATATTACTTCTCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATGGATGAAACAGTTTAATCCCTACTTCTCAGAAGCTAAAGAGGAAATAATGGAGGGAGATATTAGTAGTGGGGCTGCAGATAATCACACGGAAGATGCTAGCAAAACAGAGGCACAGTTCAATAGCTTCAATATTGAGAGTGATCATGTAAAGGATAACGGAATATGTGAGAGTCACGAACATACAGGTGATAGCCATGATGATCTTGTACAAATGCTCGTAGAACTTAATTTCCAGAATGAATATCTGAAATCTCAGATTGTGGGATGGCAAAGCATCAACATATATTCTGATGACTCTGGTCAACAAATTAAAACGGCTGCACATGAAAATGTGGCAAGTGATAATTCAGAAGACCTTAATGAGAAGATCGAATCTTTGAATAGAGAACTTTTAGAGGAAAAGCAAACACGAGGTGCTGCAGAGGTAGCACTAAAGCATCTTCAAACTCTATATTTGGAAGCTGACACAAAGGCCCAAGAGTTGTCTGTCAAAGTTGCTGAAG..........................................................................................................................................................................................................TACAAAATAAGATGGATCAGGAAATAAAAGAACGTGATGAGAAGTACTCAGAGCTAGACTCGAAAGTCAACAGACTTCACAAACGGGCAAAGCAGCGTATTCAAGAAGTGCAAAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0031D11-98q2S/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U573965" ref_strand="+" ref_description="SGN-U573965 Tomato 200607#2 [4 ESTs aligned] (*GB) gi|157328875|emb|CAO23278.1| (e_value=2e-98) unnamed; (*ATH) AT4G35640.1 (e_value=9e-94)  Symbol: ATSERAT3;2 | Encodes a cytosolic serine O-acetyltransferase involved in sulfur assimilation and cysteine biosynthesis. Expressed in the vascular system. Expression is induced in both roots and shoots under sulfur-starved conditions. | chr4:1... ; (*SWP) sp|Q8W2B8|SAT4_ARATH (e_value=8e-93) Serine acetyltransferase 4 OS=Arabidopsis thaliana GN=SAT4; ">
      <seq>gttcttgtttgagcgacgatacttggttcgctctttctcaaatgcgtaccaccaccaccttacaggtcgaagatccacaaataatcggacccaattcccccggcatgcccgagtactgtttagaaaaagttttccccgtttacgcggttggcgtttccgaacccgacccgaacttgatcgtctctgtcgctaacaccgcttctactcttggtgaccctatttgggatgctgtaaagcttgaagcaaagcttgaggcagagaaggagccaatattaagcagcttcttgtacgcaagtattttgactcatgattgtttggaacgggcattgagctttgttctttccaaccgtctgcaaaatcctacacttttggcaactcaattaatggacatattctctgatgtaataatgcacaatcggtgcatccaatgctctattcgacttgatttacaggcatgtaaagatagagatccttcatgtttgtcatactgttctgctcttttgtaccttaagggttatcatgctttacaaacacatcgagttgcacatacgctatggaatcaagggcgcaaagtcttggcattggcgttacaaagtcgagttagtgaggtttttggagttgatatacatccagctgcccaaattggagagggaattcttctggatcatgccactggtgttgtaattggtgaaactgctgtcatagggaatagagtttcacttatgcagggcgtaaccttgggaggtactgggaaagagattggtgataggcatcccaaaataggtcaaggtgcactgattggagctagtgcaactatacttggaaatatagaaataggggaaggtgcaatggttggtgctggttcccttgtgatgaaggatgttcctccccacaggttgagtattatatattta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0031D11-98q2S/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0031D11.1" temp_strand="-" temp_description="C02SLe0031D11.1  AC215451.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0031D11 sequenced_by:kribb upload_account_name:korea">
        <position start="43633" stop="38762"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="43333" g_stop="43080" g_length="254"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="254" r_length="254" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="43079" i_stop="42237" i_length="843">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.968" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="42236" g_stop="42039" g_length="198"/>
          <reference_exon_boundary r_type="cDNA" r_start="255" r_stop="452" r_length="198" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="42038" i_stop="41947" i_length="92">
            <donor d_prob="0.716" d_score="1.00"/>
            <acceptor a_prob="0.765" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="41946" g_stop="41887" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="453" r_stop="512" r_length="60" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="41886" i_stop="41441" i_length="446">
            <donor d_prob="0.518" d_score="1.00"/>
            <acceptor a_prob="0.714" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="41440" g_stop="41345" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="513" r_stop="608" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="41344" i_stop="41241" i_length="104">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="41240" g_stop="41216" g_length="25"/>
          <reference_exon_boundary r_type="cDNA" r_start="609" r_stop="633" r_length="25" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="41215" i_stop="41040" i_length="176">
            <donor d_prob="0.990" d_score="0.00"/>
            <acceptor a_prob="0.947" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="41039" g_stop="40945" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="634" r_stop="728" r_length="95" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="40944" i_stop="39248" i_length="1697">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="39247" g_stop="39062" g_length="186"/>
          <reference_exon_boundary r_type="cDNA" r_start="729" r_stop="914" r_length="186" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0031D11.1" gen_strand="-" ref_id="SGN-U573965" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>914</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0031D11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U573965" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="43333" e_stop="43080"/>
          <exon e_start="42236" e_stop="42039"/>
          <exon e_start="41946" e_stop="41887"/>
          <exon e_start="41440" e_stop="41345"/>
          <exon e_start="41240" e_stop="41216"/>
          <exon e_start="41039" e_stop="40945"/>
          <exon e_start="39247" e_stop="39062"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTCTTGTTTGAGCGACGATACTTGGTTCGCTCTTTCTCAAATGCGTACCACCACCACCTTACAGGTCGAAGATCCACAAATAATCGGACCCAATTCCCCCGGCATGCCCGAGTACTGTTTAGAAAAAGTTTTCCCCGTTTACGCGGTTGGCGTTTCCGAACCCGACCCGAACTTGATCGTCTCTGTCGCTAACACCGCTTCTACTCTTGGTGACCCTATTTGGGATGCTGTAAAGCTTGAAGCAAAGCTTGAGGTCTGTTTTTTTCATTCTACTTTTTTACTTCTTCTCTTTTTAACTACCACTGTGTATTTGATGTTTTCACAAGAATCAAACACATGTGCAAAGTTTACACAGATAAAAAAAAAGAAATCACGAGTTTGTTGGGATTTGAGCCTGCTTTACACATAGTTTGACCTCAACACAACTGTTTCATTTAAGTTAACAGTTTTTTTTTTTTTTGGTAGAAGTTGTTCTTGGGATTTGATTTATATCAATGGTACAATTGCTAAGAATTTAATATTTTAATCATTTATCCATCCTCGTTTCCAAGTTATTACCTATTCACATGTGCTATAGATAGTTTACTTTTAAATTATGTTGTTCGATCCTTTAAAAATTTCTAACACACATCCGATGCTATTTTAAGAGTTTGAGCAACGTAACTTTTTAAGTCGCATGATAGATTAATTTTCAACACTGATGGTGGTGGATATCAATACTCTATTGTTGGTCTTGGATCAGATGGATGTTTTCGTATGTCCGGTGTTTGTAAGCTTTCATAGTGGAGTTGATGTAACAAATTCGATAGTTTGATAGTGGAGTTAATGTAACAATTTGATGGTGGAGTTAATATAAGAAATTTGATAGTGTAGTTAATGTAACAAATTTGATAGTTTGATGGTGGAGTTAATGTAACAATCGTTTTCAGCTTTTCCATCATCAAGAGAACATGTATAATAAAGATCTGAAATCTACTATGTAAATATAGGTAAGCTGGATTTTTCTCGATTTGTGAGTTTTGTATGGATTTTGAGAATGTGTTTTCGCTGATAGTTTTGTGGAACCATTTAATTTTGTTTCTATTATGCGATTCAGGCAGAGAAGGAGCCAATATTAAGCAGCTTCTTGTACGCAAGTATTTTGACTCATGATTGTTTGGAACGGGCATTGAGCTTTGTTCTTTCCAACCGTCTGCAAAATCCTACACTTTTGGCAACTCAATTAATGGACATATTCTCTGATGTAATAATGCACAATCGGTGCATCCAATGCTCTATTCGACTTGATTTACAGGTGCCCTCGGGATTCCATGAATCTCAAATACATTCTCTCTTTATACTTTTTGGCAAGTATTAACAATTCCTTTTGTCCCTCCTCCTTGTCAGGCATGTAAAGATAGAGATCCTTCATGTTTGTCATACTGTTCTGCTCTTTTGTACCTTAAGGTGCTGTCTTTTGGTCTTTTATTCTATTTAGATGATTATTGTTTATATTTTTGTTTTATTTGTTTCCTATCTCTTTCCCCCATTGGAACCTAATTTTATTACCCTTTCATTTTGTTGAATATTTACTTACAGTTACATCAACTTCTTTTCTAGACACTAACACAGTTGAGATACTAAATCCTATGAACTTGTAAAGGAGCCTCATTAAGTTTACCCTTGGTGTTTATTTCTCCTAAATTCTTAGCTAGGCAAACTATCTTTTAGCAAGTCTACTTCTTATCTTAATAACCTCCATGCTTCATCTCAGTGTTTCTTTATCACCGTTGATTTATATAGAGAGGGATACAAGACGAGAGAATTATGGTTCTCAATCTACTGAGGATTTTGCTTTTCTGATATTTGATTGCGAATTTTTTAGATCCTGATATCAAAACTAATCTGTTTAGGGTTATCATGCTTTACAAACACATCGAGTTGCACATACGCTATGGAATCAAGGGCGCAAAGTCTTGGCATTGGCGTTACAAAGTCGAGTTAGTGAGGTAATCTGATATCCTCTACTTGGTGATAGCCATCATTGTCATTTTCAATAGTACTGACCTATTGCTCTATGTTACTTCATTGTGATTTTGTCACTTCAATACAGGTTTTTGGAGTTGATATACATCCAGGTAATCATTCAGTTTCTCCACCCCACTATCTGCACCAAAAGATATGGTTTCTGTTTTATTCCTGCCAATTAAATTCTCACAAGTTACTTTTGTAAAAACTACCAGTCAATTATCTTATTAGTGGATCTGCATCGATAACTATGACTAAGTTATACCTGTGTTTGCCTATAAAACAGCTGCCCAAATTGGAGAGGGAATTCTTCTGGATCATGCCACTGGTGTTGTAATTGGTGAAACTGCTGTCATAGGGAATAGAGTTTCACTTATGCAGGTGAGTTATGCCGATTCCTATACGTTGCGTGTTGGTGTGTCATTTAATACCTATCTTCTGCACTGTAGATTTCTGATTGAGTGGAGGATAAGATAATTACACTTTTTCCTTATTTTTTATTTCACTTTGCCTTCAGATTAAAAGATCGAACAGAAATTTGAGTGTCATGGTAAAATACAAGTATCTATATGCCTGACAACATTTATTAGAGTTTTCGAGCATACAATGTTAACAAATTGTTGATCAAAATAACTAATAACTGATAGAAAATTCTGTTATTGTAAAGGCTGGTACAGATGTTCTCCTTTGGAGCCTGACAGCAGTGGTTTCCCTAGCCCTCTAAGTGATTGACTGAATCCGGTAGATGTTTAGGAGTACCTTTCAATGAGTGGAGTGTGTTTTATGTTTACCCTATAATTTTAAATTTGCAACTAGAAAATTGGTTTGTCATCTATCCCTTTTCAATCGTTTATCCTTCAACTTCTTGAAAAAATTGAAAAACCCTTTAAAAAATACTCTAGAGCCCCCTACCCTCTCCTCCCAACAACCAATCCTAAAACTCTTTTTAGCAAAACTTTCCTCAACTTCAGTTCCTACATAAGTCAACCCCCCTTCCAGAGCTCTGCCAGTTCATGAGGTGTGGATTGTTTTGCTTGAATTTGTTGTGGCAGGTAGGGTATACCATCTAATCTATGTTGCATGTGATGCAGAGAGTATAGATAGTACAAGAATCAGTTCATTCTTCCACCATAACATAAACGTATTTGTGGACATGAGGGTAATCCTGTCAAAAGATTCTTCACATGAGGTGCAATAGTATAGTTTTTGTGTAGTGATTTCTAGTGATGTCTTGAGGTGGCAACTAGTGGGAATCCTTCTATGTGAACGGAAACGGATTCCTTAAGCATCTGTTACCTAAATAATTCATTCCATCACCTTGAATATCATCAATCTGTACTATATAAGCTGGGAAACTTGTACTATATAAGCTGGGAAACTTGAATCTCATGGGGAAGTTCATACGTCCTCTATCCCGAAGATCGTCTAAATCGCCGTTTTGGTCACTCACAAAGTTGTGTCCGTTTTTCTAAAACGGAAGTAAATAAACTTCGCACAACAAAATGTTTGGTGTTTGTTACACTCGTCAGTATTCTTCCATCTTCTTCTTCTTCTATAACACTATACTCAAAATACAGCTCACATGTCCTTGCAACAAAATACTAAACAAATATTTTTAAAGGCTTGTCCTAATAAGTGCACAAAGTGAAAGCTGGATAAATTGGGAGGGATTAGTTGCATTTTATTTGCCTCGACCAATTTATGGGAGAGTTCTTATACTTGTCATTGGACAAACTTAAACTTTTGAACCCTGTATCGTGTCATGAAATCCATTTAGTGTCTCCCAGGTACTGAGCACGTAATGAGTAGACAGTCTGCCACTGTGAATCTGTGCTCTGACCAGCTTAAACTTTCAATTTCCAGATCCTATTATGAAGCTCATTTATTGCCTCCCAGCTGCTGAGTGGGTTATGAGTAGACTGCAGACACCCAGGCTCTTCCTCTTGTATTTGTATTTAACACAATATAACTGATTATTTTATCCTCCACATCATGTCTGTAGATTCATTATGTGGAGATGTTTGTCAGTATAAATTCTGTTTAGTACTCCTTTTTTCACCTGAATATATTTTGCACAGGGCGTAACCTTGGGAGGTACTGGGAAAGAGATTGGTGATAGGCATCCCAAAATAGGTCAAGGTGCACTGATTGGAGCTAGTGCAACTATACTTGGAAATATAGAAATAGGGGAAGGTGCAATGGTTGGTGCTGGTTCCCTTGTGATGAAGGATGTTCCTCCCCACAGGTTGAGTATTATATATTTA</genome_strand>
        <mrna_strand>GTTCTTGTTTGAGCGACGATACTTGGTTCGCTCTTTCTCAAATGCGTACCACCACCACCTTACAGGTCGAAGATCCACAAATAATCGGACCCAATTCCCCCGGCATGCCCGAGTACTGTTTAGAAAAAGTTTTCCCCGTTTACGCGGTTGGCGTTTCCGAACCCGACCCGAACTTGATCGTCTCTGTCGCTAACACCGCTTCTACTCTTGGTGACCCTATTTGGGATGCTGTAAAGCTTGAAGCAAAGCTTGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGAGAAGGAGCCAATATTAAGCAGCTTCTTGTACGCAAGTATTTTGACTCATGATTGTTTGGAACGGGCATTGAGCTTTGTTCTTTCCAACCGTCTGCAAAATCCTACACTTTTGGCAACTCAATTAATGGACATATTCTCTGATGTAATAATGCACAATCGGTGCATCCAATGCTCTATTCGACTTGATTTACAG............................................................................................GCATGTAAAGATAGAGATCCTTCATGTTTGTCATACTGTTCTGCTCTTTTGTACCTTAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTATCATGCTTTACAAACACATCGAGTTGCACATACGCTATGGAATCAAGGGCGCAAAGTCTTGGCATTGGCGTTACAAAGTCGAGTTAGTGAG........................................................................................................GTTTTTGGAGTTGATATACATCCAG................................................................................................................................................................................CTGCCCAAATTGGAGAGGGAATTCTTCTGGATCATGCCACTGGTGTTGTAATTGGTGAAACTGCTGTCATAGGGAATAGAGTTTCACTTATGCAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGTAACCTTGGGAGGTACTGGGAAAGAGATTGGTGATAGGCATCCCAAAATAGGTCAAGGTGCACTGATTGGAGCTAGTGCAACTATACTTGGAAATATAGAAATAGGGGAAGGTGCAATGGTTGGTGCTGGTTCCCTTGTGATGAAGGATGTTCCTCCCCACAGGTTGAGTATTATATATTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0031D11-98q2S/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U567746" ref_strand="+" ref_description="SGN-U567746 Tomato 200607#2 [5 ESTs aligned] (*GB) gi|3790190|emb|CAA74777.1| (e_value=3e-168) NAD-dependent isocitrate dehydrogenase [Nicotiana tabacum]; (*ATH) AT4G35260.1 (e_value=4e-144)  Symbol: None | isocitrate dehydrogenase subunit 1 / NAD+ isocitrate dehydrogenase subunit 1, nearly identical to NAD+ dependent isocitrate dehydrogenase subunit 1 (Arabidopsis thaliana) GI:1766046 | chr4:16774200-16776330 REVERSE | Aliases: F23E12.1... ; (*SWP) sp|Q8LFC0|IDH1_ARATH (e_value=4e-143) Isocitrate dehydrogenase [NAD] regulatory subunit 1, mitochondrial OS=Arabidopsis thaliana GN=IDH1; ">
      <seq>ggagtacatgaggtggtgtttggtcagatggaccggctattcttcagcggttcacgcaaaatgtggcgcgcattgctaccgctctctccacttccttttttccttcgactttcttcactgccctttcatggcgacttaaagtcattcgcaatctgaagaattcaagacaaatcaaaatcaaatagctatggctcggaaatcctttccgatcctaaaacaactcatccaacaatcgaccaatcgttgttttacctctaccgtctcgccgcgagccgtcacgctgattccaggcgatggcgttggtccactggtaaccgattcagtcgaacaggtgatgaaggcgatgaaggcacctgtttactttgagcgatacgaagtgcgtggtgatatgaagtgtatgccggaggaagtaattgattcgattaagaagaataaggtttgtctgaaaggagggctaaggactccggttggcggaggtgttagttcgctaaatgtgcaaatgaggaaagagcttgatttgtacgcttccattgtgcattgttttactctgccagggttgcctacgcggcatgaggatgtggatattgttgtgattagggagaatactgagggagagtatgctggccttgagcatgaggttgttcctggtgtcgttgagagccttaaggtgataacaaaatattgctcagaacgaatagcaaaatttgcgtttgagtatgctcatgtgaacaaaagaaagaaggtcacagctgtgcacaaagccaacattatgaaacttgcagatggtctattcttagaatcctgtagggaagttgcagctaaatatccagaaatacagtatgaggagattattgtggataattgctgcatgcaacttgtctcaaggccagagcaatttgatgtcatggtgactcccaacctctatggaaatttgattgcaaatacggctgctggcatagctggtggcacaggagtcatgccaggaggtaatgttggcgctgatcaagcagtttttgagcaaggtgcttccgctgggaatgtcggcaatgaaaagatattgaagcttaagagagcaaatccagtggcgcttcttctgtcgtcagcaatgatgctgagacatcttgaatttccgtcatatgctgatcgtttagaaactgctgtaagacatgtaatagaagagggaaaattcaggacaaaggatgttggaggggatagctctactcaagaagttgttgatgcaattatagctgctttagactaatcggaattgacagtcgtcaagtttttaggagaattattcactgtccagagatctacttggcctattttttgcacagctgcaattttgttttaactttctgagaatatttgctgctacaattctaaattatctttttttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0031D11-98q2S/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0031D11.1" temp_strand="+" temp_description="C02SLe0031D11.1  AC215451.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0031D11 sequenced_by:kribb upload_account_name:korea">
        <position start="54632" stop="60963"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54931" g_stop="55597" g_length="667"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="667" r_length="667" r_score="0.999"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="55598" i_stop="56763" i_length="1166">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.947" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="56764" g_stop="57003" g_length="240"/>
          <reference_exon_boundary r_type="cDNA" r_start="668" r_stop="907" r_length="240" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="57004" i_stop="58414" i_length="1411">
            <donor d_prob="0.903" d_score="1.00"/>
            <acceptor a_prob="0.963" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="58415" g_stop="58493" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="908" r_stop="986" r_length="79" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="58494" i_stop="60249" i_length="1756">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.978" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="60250" g_stop="60663" g_length="414"/>
          <reference_exon_boundary r_type="cDNA" r_start="987" r_stop="1400" r_length="414" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0031D11.1" gen_strand="+" ref_id="SGN-U567746" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>1400</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0031D11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U567746" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54931" e_stop="55597"/>
          <exon e_start="56764" e_stop="57003"/>
          <exon e_start="58415" e_stop="58493"/>
          <exon e_start="60250" e_stop="60663"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAGTACATGAGGTGGTGTTTGGTCAGATGGACCGGCTATTCTTCAGCGGTTCACGCAAAATGTGGCGCGCATTGCTACCGCTCTCTCCACTTCCTTTTTTCCTTCGACTTTCTTCACTGCCCTTTCATGGCGACTTAAAGTCATTCGCAATCTGAAGAATTCAAGACAAATCAAAATCAAATAGCTATGGCTCGGAAATCCTTTCCGATCCTAAAACAACTCATCCAACAATCGACCAATCGTTGTTTTACCTCTACCGTCTCGCCGCGAGCCGTCACGCTGATTCCAGGCGATGGCGTTGGTCCACTGGTAACCGATTCAGTCGAACAGGTGATGAAGGCGATGAAGGCACCTGTTTACTTTGAGCGATACGAAGTGCGTGGTGATATGAAGTGTATGCCGGAGGAAGTAATTGATTCGATTAAGAAGAATAAGGTTTGTCTGAAAGGAGGGCTAAGGACTCCGGTTGGCGGAGGTGTTAGTTCGCTAAATGTGCAAATGAGGAAAGAGCTTGATTTGTACGCTTCCATTGTGCATTGTTTTACTCTGCCAGGGTTGCCTACGCGGCATGAGGATGTGGATATTGTTGTGATTAGGGAGAATACTGAGGGAGAGTATGCTGGCCTTGAGCATGAGGTTGTTCCTGGTGTCGTTGAGAGCCTTAAGGTACAGCAATTTTCATTTTGAGAACTTTGTTATTTTAGTATGTGAAGTGAGTTTGTTAGATTCGTAATCTTTTGCTTAATTCTGCTTTGTGAAAACTTTTCCCGCATTGAATTTAAATTTTGATGAATATTGAATGTGTTAAGAAAATGACTACCTAGGTTGCTGTCCAAAGGACCTCTCTTAATAGGCATGTGTGTTTAGCTAAGACAAACACAAGGATGCCAAAATGCCTAGAGTCATGCTGGTACAATTTTGTCCTTTCAGGAGCCTTTATTGACTATTGCAATGAAGTGGGTCCAGATGGTTCGGATGGATTATATAGACAACTCATACTAGTATGGGATTGGGCATAGTTTTTGTTGTTGTATCCAACTTTACTGTATCTAAAAAATGGGATCATTTACTTTTTAAAGTAGGATTGGACGTGTAGATGGCTCTCATGTACATTTGGGTACTCTGAATCCTCAAATTGCTAAAAGGATGTAACTATTTGGTGTTCCAAATGTGCACTTATCCTTGACGATTTAGATCATAGTCATGTTTAGCCCCTTTGTTGGGTAGTGTGCACAAGGCCCTATGTATGACAGTAGGGGGCACAACAAACCCCTGATTCCTTAATAGGTTAGTATGGCTGCTATGGCAGGCCCCATGTTGGGCACAGTGCACATTATTTGATTAAATGAGGAGTACCTTTTGCGCTCCATCCTTATGCTGGAGGGTGCAATTTTTCAGAAGCATTGCATATCTTCTTCATTTTATGACATTATTACCATGTATAGAATATGCTTGATAGACGATGTAATCTTGAGTGAAGTGTATGGATTGTCAGTTGCAGTTGAACCTGTTTGATCTTGGTTTGTGCATGAGGAAGAATTGCATAGTTAGAGCTATCTTTACCTGGTCACAACGTTAGAGAAATGGGCCAGCTTAGCAAGATGGACATATGATATTTTCTTTATAACATTCTTTCTGTTGTAACATTACCAATTTCTGCCTATGTGGTTTAATGATATTCTTATTATGCTCGTTTCTTTCCTCTTCTATGAAAGAGTTGTTTTTTCTCTTCACTAATTTTCCTTTGTGGTTCTTATTATATCAAATCGTCTGTAAAGTTTTCCTGTTCCACAACTTGCTTCATCCCATACTTTCATGTGTTCCCTTTCCAGGTGATAACAAAATATTGCTCAGAACGAATAGCAAAATTTGCGTTTGAGTATGCTCATGTGAACAAAAGAAAGAAGGTCACAGCTGTGCACAAAGCCAACATTATGAAACTTGCAGATGGTCTATTCTTAGAATCCTGTAGGGAAGTTGCAGCTAAATATCCAGAAATACAGTATGAGGAGATTATTGTGGATAATTGCTGCATGCAACTTGTCTCAAGGCCAGAGCAATTTGATGTCATGGTATGGGGATATGCTTCCTTGGCTTTTCTTTTACTAAGTCCTTCAATTCTAGCTTCCTTTATAAATCTGATATCTAATGGTGTCAGATAAGTTTATCACAAAATGAAGTCTAATGGCGAGTGCTATCAATCTTGTGTAATCATTGAGGAGAGGATGGGCATACTGAGAGCTTGTCCTGTCTGTTGTTTGTGTGTAGTTGGATAATTAGCTTGACTTTTGAAGTTCAAAAATTCCTTGAAGATGCTATGAGACTAGTTCATATGGTACTCGGCTATGGATTAACGACACGCAAATGATATTGGAAAGTGTGTCTTCACAGAGTTGCTTACGTAGTCAAAGGGCCTACCCTTGGCAGCGTGTCTCTAGCATCTACTTTGACCTCTTATTTTGTGTTCTTACTGGTAATGGTTGAGAAAAGTGATGTGATGAAATAACAAAGTCCAAATGACAATGTCAGCAAAAATATTAAGAGTCTTTTTCCTTCTCCTTCTACAACTTGAATAATCTTGCACCTGGGATTTCCGAGCGTCCTCTTTGATTTTCTTGTAAATAATATGAATCAGCGAGCTCGACTACAACAACACCATACCAAAGTAGTCCCACAAAGTAGGGTCTGGGGAGGGGAAGGGGGAGGGTAGAGTGTATGCAAACCTTACCCCTACACTCAGCGGTAGAGAGGGTGTTTCCTATAGACCCGCAGCTCAAGCAAAAACAAATCAAAGCAATCCAGAAAAAGAAGTAATGGATGTGAAAGTATAACAAAGCATGCTGAACAGTAAATACAACAAAATAATACAATTACCGAAGCACAAGAAACTATTAGTATGAATCAGTGAGCTTGATTGGTGGTAAAAAATGCTTGCGTCACTCAGTGCAACTTAAAGGAAAGGGAATTATGTATTGCTATCCCGGCAGCTATTTGGTGGACTACTCGAAGAGGATATTTTTCAACACAAACAAGAGAACGTACATAGTCTTAAATTTAAATGTATTCTTTTTCTTTCTTTTTGTATAAAATGGCAAATATAAATGTTACTTAGAATGTGAGGCCGTGCTTTACTTTGTTTTAACTCCTTACACACTCTGTTTTAACTGACCGAAGCTTGTAACTGGTTCAATGTTCCATCAAGCCTTTGTTGCTTGTCATACATCTATAAAAGCTTACCTTATAAAAATAAGAATATCACTGAGAAAGTATGGATGGAAAAACATTTAAGATTAGCTAAGGCAGGTATCTTCCCCTTGTCTTTCTCATGGTGGGTTTTGTAGATTAAGAGTCATCAGCTTTCCTGCATCGGTCCAGAAGCAAGTTTTAGTGTTCTATTCTGCCTCTTTTTATTAACCCCTTTCCTCATTTTGATACATCGCTGATAAGATTGTTGCTGAAGTACAAGAAATTGCAATTATGTAGGTGACTCCCAACCTCTATGGAAATTTGATTGCAAATACGGCTGCTGGCATAGCTGGTGGCACAGGAGTCATGCCAGGAGGTAAATTTCTGATATATATATATATATATATATATAATTATTTACATCTCTCTATTATGCTAAGTTATTGACTTTGGCTGGCATTAGCTGTCTTTTTTTGGTCTATAGATGACAATTTGATCTTAAGATTTTCACTAGTTAAGATACCCTTCATTTGGTGTCTAATATGTAGCTCACATTTCATCAAACATAATTCTGGTGATCTAAACCTGTTAAACTTTCTGGCAGCTAAATGAGCAAACTCCTTTGTAGTTTGATTTCTTGGTAGCTTAAGTCTAGCTATACTGCAATAAGAATGGAAAATTGATCCAATAAACTCTCTAAATGGACAGAAAAATCATATCTTATAGAACTTGAGGTACTTGAAAAGAAAAAGAAATACAGTGGATGGGCGCATCATCTGTTGGACTTCAGTATAACCAGATTGACATTAGTGCTGCGAAATCAAGGCAGAGGTAGTGGAAATCGTTGCAGATTGAGATTACGACACAGTCATGCCATAGGTTAAGCAGACTCAGATTGCAAATACATAACCTAACTACAAAAAATTCATCGGTCAAGAGTATCAGATTTAGACAATCTTATGCACATTAGGTTAGAACAGAGAAGTCGTCTGCAGAGGTTGATTATCTGAGGGCTAGAGAATAGCTGAAGTCGCACAATATTTAGTAGAGGAGGATATAGAATTTCAATATAAGAAATTTGGTTACACTAGGGATTAGGTCATCTTAACAAATGTTTTTAGTTTGAAAACCGGAGCTCACATAACCTAGCTCTCTCATTTGTTGGAGGTGCAGAGAAGGCTCAGAACATGGGTAACTAAGGTGAACAACACATTTTCACTGTGGATAGTATTAGCATTATCCACATAGTCCTTGTCCTCCAATTTCTGTTACTAACTGTTGTTTCTTGTGCCTCAGTTTTCACATTATTTTGTTGTTCTTTTTTTGTGTGTTTTCATTATTATTTGCTATGTCTTTTTTACTTTGTATTTTCTCTTCGATACCTGTTTGATATGCATTCCTTGAGTTGATGATATTTCAGAAACAACCTCTCTACCTCCATGAGGTAAGGGGGTAAGGTCTTGATATACTTTACCCTCTCCAAGCCCCACTAGTGGGATTTCACTCCTGCATCTCAATTACCTTGTTCTGTGTTGCTTTTTCTCTTCATTTTTCTATTGGATGGATCTTTATGTTTTTCCAAACTTCACTGTTGGCTTACTCAGTTAGCATGTCCAATGTAAATGCAGCTGGTCAATTATTTTTGTGGTTTCAATATCTCTTGAAAGGACTTTGTAAGTTCCAACTTCCCAATGGGGCTGGTGCGGGTGAACCATTGTGATGCTTGACCCAAAGTCTCTACATCGCTTCTTTCCCCCCTCCTCCATGACTGTGAGTAGAAGTGTTGATAAAGAAGCTTCTAGTATAATGATATCCATTTGATTACTGGTTGGTTCCTGAATTGGTTAATGCTCTTTTGCTTATATGGGACAGCTCAGACTAGTTGCTAATACTTAACAAAGTGCAGTAGAACCCTTTTTGTGAGTGCTTGCTTCTTCTCGCGAGGCATCACCAGTATGCTCATCAGTACTTGTTGATAATTTATTTGTTGGAAGAAAGATTAAAGCCTCATCCTTCTCTATTCTACAGATCATTTATAGTGTTTATCAGGGAACACTTAAAGTATTCTCAGCGTTTCCTCCTCAAGTATTAGGCCGTGTATGAGACATAATGTAGGACTGTTGTTCTCTCAGGTAATGTTGGCGCTGATCAAGCAGTTTTTGAGCAAGGTGCTTCCGCTGGGAATGTCGGCAATGAAAAGATATTGAAGCTTAAGAGAGCAAATCCAGTGGCGCTTCTTCTGTCGTCAGCAATGATGCTGAGACATCTTGAATTTCCGTCATATGCTGATCGTTTAGAAACTGCTGTAAGACATGTAATAGAAGAGGGAAAATTCAGGACAAAGGATGTTGGAGGGGATAGCTCTACTCAAGAAGTTGTTGATGCAATTATAGCTGCTTTAGACTAATCGGAATTGACAGTCGTCAAGTTTTTAGGAGAATTATTCACTGTCCAGAGATCTACTTGGCCTATTTTTTGCACAGCTGCAATTTTGTTTTAACTTTCTGAGAATATTTGCTGCTACAATTCTAAATTATCTTTTTTTC</genome_strand>
        <mrna_strand>GGAGTACATGAGGTGGTGTTTGGTCAGATGGACCGGCTATTCTTCAGCGGTTCACGCAAAATGTGGCGCGCATTGCTACCGCTCTCTCCACTTCCTTTTTTCCTTCGACTTTCTTCACTGCCCTTTCATGGCGACTTAAAGTCATTCGCAATCTGAAGAATTCAAGACAAATCAAAATCAAATAGCTATGGCTCGGAAATCCTTTCCGATCCTAAAACAACTCATCCAACAATCGACCAATCGTTGTTTTACCTCTACCGTCTCGCCGCGAGCCGTCACGCTGATTCCAGGCGATGGCGTTGGTCCACTGGTAACCGATTCAGTCGAACAGGTGATGAAGGCGATGAAGGCACCTGTTTACTTTGAGCGATACGAAGTGCGTGGTGATATGAAGTGTATGCCGGAGGAAGTAATTGATTCGATTAAGAAGAATAAGGTTTGTCTGAAAGGAGGGCTAAGGACTCCGGTTGGCGGAGGTGTTAGTTCGCTAAATGTGCAAATGAGGAAAGAGCTTGATTTGTACGCTTCCATTGTGCATTGTTTTACTCTGCCAGGGTTGCCTACGCGGCATGAGGATGTGGATATTGTTGTGATTAGGGAGAATACTGAGGGAGAGTATGCTGGCCTTGAGCATGAGGTTGTTCCTGGTGTCGTTGAGAGCCTTAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATAACAAAATATTGCTCAGAACGAATAGCAAAATTTGCGTTTGAGTATGCTCATGTGAACAAAAGAAAGAAGGTCACAGCTGTGCACAAAGCCAACATTATGAAACTTGCAGATGGTCTATTCTTAGAATCCTGTAGGGAAGTTGCAGCTAAATATCCAGAAATACAGTATGAGGAGATTATTGTGGATAATTGCTGCATGCAACTTGTCTCAAGGCCAGAGCAATTTGATGTCATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGACTCCCAACCTCTATGGAAATTTGATTGCAAATACGGCTGCTGGCATAGCTGGTGGCACAGGAGTCATGCCAGGAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAATGTTGGCGCTGATCAAGCAGTTTTTGAGCAAGGTGCTTCCGCTGGGAATGTCGGCAATGAAAAGATATTGAAGCTTAAGAGAGCAAATCCAGTGGCGCTTCTTCTGTCGTCAGCAATGATGCTGAGACATCTTGAATTTCCGTCATATGCTGATCGTTTAGAAACTGCTGTAAGACATGTAATAGAAGAGGGAAAATTCAGGACAAAGGATGTTGGAGGGGATAGCTCTACTCAAGAAGTTGTTGATGCAATTATAGCTGCTTTAGACTAATCGGAATTGACAGTCGTCAAGTTTTTAGGAGAATTATTCACTGTCCAGAGATCTACTTGGCCTATTTTTTGCACAGCTGCAATTTTGTTTTAACTTTCTGAGAATATTTGCTGCTACAATTCTAAATTATCTTTTTTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0031D11-98q2S/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U594054" ref_strand="+" ref_description="SGN-U594054 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>ggtcagatggaccggctattcttaagcggctcgcgcataaggtggcgcgcattgctaccgctctctacacttccttttttccttcaacactcttcactgccctttcatggcgacttaaagtctttcgcaatgtgacgaattcacgacgaaccaaaatctcatagctatggctcggaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0031D11-98q2S/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0031D11.1" temp_strand="+" temp_description="C02SLe0031D11.1  AC215451.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0031D11 sequenced_by:kribb upload_account_name:korea">
        <position start="54652" stop="55428"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54952" g_stop="55128" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="177" r_length="177" r_score="0.904"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0031D11.1" gen_strand="+" ref_id="SGN-U594054" ref_strand="+">
        <total_alignment_score>0.904</total_alignment_score>
        <cumulative_length_of_scored_exons>177</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0031D11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U594054" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54952" e_stop="55128"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTCAGATGGACCGGCTATTCTTCAGCGGTTCACGCAAAATGTGGCGCGCATTGCTACCGCTCTCTCCACTTCCTTTTTTCCTTCGACTTTCTTCACTGCCCTTTCATGGCGACTTAAAGTCATTCGCAATCTGAAGAATTCAAGACAAATCAAAATCAAATAGCTATGGCTCGGAA</genome_strand>
        <mrna_strand>GGTCAGATGGACCGGCTATTCTTAAGCGGCTCGCGCATAAGGTGGCGCGCATTGCTACCGCTCTCTACACTTCCTTTTTTCCTTCAACACTCTTCACTGCCCTTTCATGGCGACTTAAAGTCTTTCGCAATGTGACGAATTCACGACGAACCAAAATCTCATAGCTATGGCTCGGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0031D11-98q2S/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U601102" ref_strand="+" ref_description="SGN-U601102 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|157330777|emb|CAO49648.1| (e_value=3e-104) unnamed; (*ATH) AT2G17650.1 (e_value=3e-95)  Symbol: None | AMP-dependent synthetase and ligase family protein, similar to AMP-binding protein GI:1903034 from (Brassica napus); contains Pfam AMP-binding domain PF00501; identical to cDNA adenosine monophosphate binding protein 2 AMPBP2 (AMPBP2)... ; (*SWP) sp|Q0P4F7|ACSF2_DANRE (e_value=2e-31) Acyl-CoA synthetase family member 2, mitochondrial OS=Danio rerio GN=acsf2; ">
      <seq>ggagtacatcacttatatggactaacagagacatatggtccaggtacatataatttgtggaggcctgagtgggattctttaccaccaaacgaaaagtacaaactgaaagcaagacaaggggtgcaacatctttgttcagaggcagtggatgtgatggaccctcttacaatggagaaagtaccagaagatggtaaaacaataggtgaaattatgtttagagggaatacagtaatgagtgaatatctgaaagatgaagaagcaacaaaagaagcttttaaaggtggatggtttcatagtggtgatttggctgtgaaacatccagacggatacatagaagttaaggacagattgaaagatatcgtaatctctggtggagaaaacataagcacaatagaggtggaaagagttttgtatagtcatccagcagtttttgaaacagcagtggttgcgcgaccagataatcactgggggcaaacaccttgtgcatttgtgaagttgaaggatggttcaaatgttagtgagcaagaaattatcaacttctgcagggataacttgcctcattacatggcacctcgaacagtcatatttcaacatctccctaaaacttcaacaggcaaaatacaaaaattcattctaagagagaaagccagagccttgggaagtctttgctgaaggaaatccgtttttcttgctgtccgattctctttcttctaattttctacaactgaaagacttctatctatgctgtaatctgtttttcttaccttttaaagattgaagtctcctcaaaaggtgtatgctaatgatctctatgttgtacaagctggacatggt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0031D11-98q2S/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0031D11.1" temp_strand="+" temp_description="C02SLe0031D11.1  AC215451.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0031D11 sequenced_by:kribb upload_account_name:korea">
        <position start="64246" stop="65678"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64545" g_stop="65378" g_length="834"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="834" r_length="834" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0031D11.1" gen_strand="+" ref_id="SGN-U601102" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>834</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0031D11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U601102" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64545" e_stop="65378"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGAGTACATCACTTATATGGACTAACAGAGACATATGGTCCAGGTACATATAATTTGTGGAGGCCTGAGTGGGATTCTTTACCACCAAACGAAAAGTACAAACTGAAAGCAAGACAAGGGGTGCAACATCTTTGTTCAGAGGCAGTGGATGTGATGGACCCTCTTACAATGGAGAAAGTACCAGAAGATGGTAAAACAATAGGTGAAATTATGTTTAGAGGGAATACAGTAATGAGTGAATATCTGAAAGATGAAGAAGCAACAAAAGAAGCTTTTAAAGGTGGATGGTTTCATAGTGGTGATTTGGCTGTGAAACATCCAGACGGATACATAGAAGTTAAGGACAGATTGAAAGATATCGTAATCTCTGGTGGAGAAAACATAAGCACAATAGAGGTGGAAAGAGTTTTGTATAGTCATCCAGCAGTTTTTGAAACAGCAGTGGTTGCGCGACCAGATAATCACTGGGGGCAAACACCTTGTGCATTTGTGAAGTTGAAGGATGGTTCAAATGTTAGTGAGCAAGAAATTATCAACTTCTGCAGGGATAACTTGCCTCATTACATGGCACCTCGAACAGTCATATTTCAACATCTCCCTAAAACTTCAACAGGCAAAATACAAAAATTCATTCTAAGAGAGAAAGCCAGAGCCTTGGGAAGTCTTTGCTGAAGGAAATCCGTTTTTCTTGCTGTCCGATTCTCTTTCTTCTAATTTTCTACAACTGAAAGACTTCTATCTATGCTGTAATCTGTTTTTCTTACCTTTTAAAGATTGAAGTCTCCTCAAAAGGTGTATGCTAATGATCTCTATGTTGTACAAGCTGGACATGGT</genome_strand>
        <mrna_strand>GGAGTACATCACTTATATGGACTAACAGAGACATATGGTCCAGGTACATATAATTTGTGGAGGCCTGAGTGGGATTCTTTACCACCAAACGAAAAGTACAAACTGAAAGCAAGACAAGGGGTGCAACATCTTTGTTCAGAGGCAGTGGATGTGATGGACCCTCTTACAATGGAGAAAGTACCAGAAGATGGTAAAACAATAGGTGAAATTATGTTTAGAGGGAATACAGTAATGAGTGAATATCTGAAAGATGAAGAAGCAACAAAAGAAGCTTTTAAAGGTGGATGGTTTCATAGTGGTGATTTGGCTGTGAAACATCCAGACGGATACATAGAAGTTAAGGACAGATTGAAAGATATCGTAATCTCTGGTGGAGAAAACATAAGCACAATAGAGGTGGAAAGAGTTTTGTATAGTCATCCAGCAGTTTTTGAAACAGCAGTGGTTGCGCGACCAGATAATCACTGGGGGCAAACACCTTGTGCATTTGTGAAGTTGAAGGATGGTTCAAATGTTAGTGAGCAAGAAATTATCAACTTCTGCAGGGATAACTTGCCTCATTACATGGCACCTCGAACAGTCATATTTCAACATCTCCCTAAAACTTCAACAGGCAAAATACAAAAATTCATTCTAAGAGAGAAAGCCAGAGCCTTGGGAAGTCTTTGCTGAAGGAAATCCGTTTTTCTTGCTGTCCGATTCTCTTTCTTCTAATTTTCTACAACTGAAAGACTTCTATCTATGCTGTAATCTGTTTTTCTTACCTTTTAAAGATTGAAGTCTCCTCAAAAGGTGTATGCTAATGATCTCTATGTTGTACAAGCTGGACATGGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0031D11-98q2S/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U588041" ref_strand="+" ref_description="SGN-U588041 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|157330817|emb|CAO49786.1| (e_value=3e-54) unnamed; (*ATH) AT2G17650.1 (e_value=7e-49)  Symbol: None | AMP-dependent synthetase and ligase family protein, similar to AMP-binding protein GI:1903034 from (Brassica napus); contains Pfam AMP-binding domain PF00501; identical to cDNA adenosine monophosphate binding protein 2 AMPBP2 (AMPBP2)... ; ">
      <seq>gcatgaatccttttttcaatatttcaagattgaatgggttgttacatgctctaaacagagttcgagttcaccccattttgagtcagaggtctcgttatttgtcccaaattattcatgagaatgttgaaactcacccatgggaatccatggagggactaatgaggtgttcagctaattatttccctttaacacccattagtttcttggacagagctgctaaggtttttagagacaggacttctgttgtgtatggttcttctgttaaattcacttgggaagagactcataatagatgtctaaagatggcttctgctctgtctcagttgggtatttctcgtggtgatgttgttgcaacgctggctcctaatgtacccgcagtgcaagagttgcattttgcggttccaatggcaggagcagtgctttgtacgttgaatacacgtcatgattcagctatggtatctgttctcctgaggcattcagaagctaagatcattttcgttgaccagcagttgtttgatgttgctcaaggagcactggatct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0031D11-98q2S/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0031D11.1" temp_strand="+" temp_description="C02SLe0031D11.1  AC215451.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0031D11 sequenced_by:kribb upload_account_name:korea">
        <position start="70458" stop="71769"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70757" g_stop="71103" g_length="347"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="347" r_length="347" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="71104" i_stop="71275" i_length="172">
            <donor d_prob="0.929" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="71276" g_stop="71469" g_length="194"/>
          <reference_exon_boundary r_type="cDNA" r_start="348" r_stop="541" r_length="194" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0031D11.1" gen_strand="+" ref_id="SGN-U588041" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>541</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0031D11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U588041" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70757" e_stop="71103"/>
          <exon e_start="71276" e_stop="71469"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCATGAATCCTTTTTTCAATATTTCAAGATTGAATGGGTTGTTACATGCTCTAAACAGAGTTCGAGTTCACCCCATTTTGAGTCAGAGGTCTCGTTATTTGTCCCAAATTATTCATGAGAATGTTGAAACTCACCCATGGGAATCCATGGAGGGACTAATGAGGTGTTCAGCTAATTATTTCCCTTTAACACCCATTAGTTTCTTGGACAGAGCTGCTAAGGTTTTTAGAGACAGGACTTCTGTTGTGTATGGTTCTTCTGTTAAATTCACTTGGGAAGAGACTCATAATAGATGTCTAAAGATGGCTTCTGCTCTGTCTCAGTTGGGTATTTCTCGTGGTGATGTTGTAAGTTCGATTTCTCCGCTTTAGAATATTACGTCTAAATGAATGGTTAATAGTATATGGCTAAACTTTTTCATCTTTGGAATAAACTTCTACTAACATTTTAGTTTGATCACATATGAAAAGTTTTTAAATCTGTGATGTCTCATGGTTGTTAGTGTAAATGCTTGAATAGGTTGCAACGCTGGCTCCTAATGTACCCGCAGTGCAAGAGTTGCATTTTGCGGTTCCAATGGCAGGAGCAGTGCTTTGTACGTTGAATACACGTCATGATTCAGCTATGGTATCTGTTCTCCTGAGGCATTCAGAAGCTAAGATCATTTTCGTTGACCAGCAGTTGTTTGATGTTGCTCAAGGAGCACTGGATCT</genome_strand>
        <mrna_strand>GCATGAATCCTTTTTTCAATATTTCAAGATTGAATGGGTTGTTACATGCTCTAAACAGAGTTCGAGTTCACCCCATTTTGAGTCAGAGGTCTCGTTATTTGTCCCAAATTATTCATGAGAATGTTGAAACTCACCCATGGGAATCCATGGAGGGACTAATGAGGTGTTCAGCTAATTATTTCCCTTTAACACCCATTAGTTTCTTGGACAGAGCTGCTAAGGTTTTTAGAGACAGGACTTCTGTTGTGTATGGTTCTTCTGTTAAATTCACTTGGGAAGAGACTCATAATAGATGTCTAAAGATGGCTTCTGCTCTGTCTCAGTTGGGTATTTCTCGTGGTGATGTT............................................................................................................................................................................GTTGCAACGCTGGCTCCTAATGTACCCGCAGTGCAAGAGTTGCATTTTGCGGTTCCAATGGCAGGAGCAGTGCTTTGTACGTTGAATACACGTCATGATTCAGCTATGGTATCTGTTCTCCTGAGGCATTCAGAAGCTAAGATCATTTTCGTTGACCAGCAGTTGTTTGATGTTGCTCAAGGAGCACTGGATCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0031D11-98q2S/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U588040" ref_strand="+" ref_description="SGN-U588040 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|157358550|emb|CAO66226.1| (e_value=8e-23) unnamed; (*ATH) AT1G20560.1 (e_value=6e-22)  Symbol: None | AMP-dependent synthetase and ligase family protein, similar to AMP-binding protein GI:1903034 from (Brassica napus); contains Pfam AMP-binding domain PF00501; identical to adenosine monophosphate binding protein 1 AMPBP1 (AMPBP1) GI:2... ; ">
      <seq>ggttgtgtatggttcttctgttaaattcacttgggaagagactcataatagatgtctaaagatggcttctgctctgtctcagttgggtatttctcgtggtgatgttgtaagttcgatttctccgctttagaatattacgtctaaatgaatggttaatagtatatggctaaactttttcatctttggaataaacttctactaacattttagtttgatcacatatgaaaagtttttaaatctgtgatgtctcatggttgttagtgtaaatgcttgaataggttgcaacgctggctcctaatgtacccgcagtgcaagagttgcattttgcggttccaatggcaggagcagtgctttgtacgttgaatacacgtcatgattcagctatggtatctgttctcctgaggcattcagaagctaagatcattttcgttgaccagcagttgtttgatgttgctcaaagagcactggatcttcttgcagatgctaaaacaaaacctcttctaatattaatccctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0031D11-98q2S/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0031D11.1" temp_strand="+" temp_description="C02SLe0031D11.1  AC215451.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0031D11 sequenced_by:kribb upload_account_name:korea">
        <position start="70699" stop="71813"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70998" g_stop="71513" g_length="516"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="516" r_length="516" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0031D11.1" gen_strand="+" ref_id="SGN-U588040" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>516</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0031D11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U588040" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70998" e_stop="71513"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTTGTGTATGGTTCTTCTGTTAAATTCACTTGGGAAGAGACTCATAATAGATGTCTAAAGATGGCTTCTGCTCTGTCTCAGTTGGGTATTTCTCGTGGTGATGTTGTAAGTTCGATTTCTCCGCTTTAGAATATTACGTCTAAATGAATGGTTAATAGTATATGGCTAAACTTTTTCATCTTTGGAATAAACTTCTACTAACATTTTAGTTTGATCACATATGAAAAGTTTTTAAATCTGTGATGTCTCATGGTTGTTAGTGTAAATGCTTGAATAGGTTGCAACGCTGGCTCCTAATGTACCCGCAGTGCAAGAGTTGCATTTTGCGGTTCCAATGGCAGGAGCAGTGCTTTGTACGTTGAATACACGTCATGATTCAGCTATGGTATCTGTTCTCCTGAGGCATTCAGAAGCTAAGATCATTTTCGTTGACCAGCAGTTGTTTGATGTTGCTCAAGGAGCACTGGATCTTCTTGCAGATGCTAAAACAAAACCTCTTCTAATATTAATCCCTG</genome_strand>
        <mrna_strand>GGTTGTGTATGGTTCTTCTGTTAAATTCACTTGGGAAGAGACTCATAATAGATGTCTAAAGATGGCTTCTGCTCTGTCTCAGTTGGGTATTTCTCGTGGTGATGTTGTAAGTTCGATTTCTCCGCTTTAGAATATTACGTCTAAATGAATGGTTAATAGTATATGGCTAAACTTTTTCATCTTTGGAATAAACTTCTACTAACATTTTAGTTTGATCACATATGAAAAGTTTTTAAATCTGTGATGTCTCATGGTTGTTAGTGTAAATGCTTGAATAGGTTGCAACGCTGGCTCCTAATGTACCCGCAGTGCAAGAGTTGCATTTTGCGGTTCCAATGGCAGGAGCAGTGCTTTGTACGTTGAATACACGTCATGATTCAGCTATGGTATCTGTTCTCCTGAGGCATTCAGAAGCTAAGATCATTTTCGTTGACCAGCAGTTGTTTGATGTTGCTCAAAGAGCACTGGATCTTCTTGCAGATGCTAAAACAAAACCTCTTCTAATATTAATCCCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0031D11-98q2S/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U579500" ref_strand="+" ref_description="SGN-U579500 Tomato 200607#2 [2 ESTs aligned] (*GB) gi|147839020|emb|CAN70332.1| (e_value=2e-83) hypothetical; (*ATH) AT3G51440.1 (e_value=2e-73)  Symbol: None | strictosidine synthase family protein, similar to hemomucin (Drosophila melanogaster)(GI:1280434), strictosidine synthase (Rauvolfia serpentina)(SP:P15324); contains strictosidine synthase domain PF03088 | chr3:19100060-19101618 FORWA... ; (*SWP) sp|Q9D7N9|APMAP_MOUSE (e_value=2e-26) Adipocyte plasma membrane-associated protein OS=Mus musculus GN=Apmap; ">
      <seq>ccgttgttacttctgagggtgaaattaaagtgctaacagaggaagctgaaggcctgaaattgaaattggcagacgctgtagacgttgcagaggatggaattatatatttctccgatgcttcttacaaatataacatcgaacaatacatttatgattttcttgaaggaagaccccatggaagattgttaagttatgatccatcaactaaacagaccaaaacgctacttagcaatctgcattttgctaatggcgttgcagtctctcctgatcaaaattatgttatcttctgtgaaactcctctgaggaaatgcaaaaagtatcatataaaaggcgaaaaaaaaggatccgtcgatatgtttgttgataatttacctggatttcctgacaacattcgttacgatggtgaagggcattattggattgcatttgcctcggttagtttcttcataacatttaaatttgatgtgttcaatctttagggtacaccgctctctcatattttgtttctgataacttgaacaggaaaacacatattcatgggacttggcactaaagtacccattcatcagaaagataatggctataatggtgaaatatgttggacaaccaaaggcagagaaaaatggtggtgttttatctgctgatttacaaggaaatccactggaacactattatgatgaggatttgacaatggtgtcaagtggcattaagattggtgatcatttgtactgtggctctgttaagtctccgtatatactacgcctcaatctcaaacaatatcctgccgttcaaacttcataaacaaagatgaccatgaccattttcctagtatagaaatgtaagtgtttgatttcaaaaaataatgagtgtatttgttactacaagtagagtcgttcaattttgcataagatttagtgttttctttttaatttattataaaaagtaaaaaaaattcagcatatgcaactaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0031D11-98q2S/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0031D11.1" temp_strand="-" temp_description="C02SLe0031D11.1  AC215451.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0031D11 sequenced_by:kribb upload_account_name:korea">
        <position start="76260" stop="43181"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="75965" g_stop="75665" g_length="301"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="301" r_length="301" r_score="0.973"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="75664" i_stop="75589" i_length="76">
            <donor d_prob="0.996" d_score="0.98"/>
            <acceptor a_prob="0.996" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="75588" g_stop="75085" g_length="504"/>
          <reference_exon_boundary r_type="cDNA" r_start="302" r_stop="809" r_length="508" r_score="0.966"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="75084" i_stop="75023" i_length="62">
            <donor d_prob="0.933" d_score="0.96"/>
            <acceptor a_prob="0.000" a_score="0.62"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="75022" g_stop="74965" g_length="58"/>
          <reference_exon_boundary r_type="cDNA" r_start="810" r_stop="866" r_length="57" r_score="0.603"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="74964" i_stop="74398" i_length="567">
            <donor d_prob="0.000" d_score="0.67"/>
            <acceptor a_prob="0.000" a_score="0.53"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="74397" g_stop="74275" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="867" r_stop="985" r_length="119" r_score="0.593"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0031D11.1" gen_strand="-" ref_id="SGN-U579500" ref_strand="+">
        <total_alignment_score>0.901</total_alignment_score>
        <cumulative_length_of_scored_exons>986</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0031D11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U579500" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="75965" e_stop="75665"/>
          <exon e_start="75588" e_stop="75085"/>
          <exon e_start="75022" e_stop="74965"/>
          <exon e_start="74397" e_stop="74275"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAACGTTACTTCTGAGGGTGAAATTAAAGTGCTAACAGAGGAAGCTGAAGGCCTGAAATTGAAATTGGCAGACGCTGTAGACGTTGCAGAGGATGGAATTATATATTTCTCCGATGCTTCTTACAAATATAATATCGAACAATACATTTATGATTTTCTTGAAGGAAGACCCCATGGAAGATTGTTAAGTTATGATCCATCAACTAAACAGACTAAAACGCTACTTAGCAACCTGCATTTTGCTAATGGCGTTGCAGTCTCTCCAGATCAAAATTATGTTATCTTCTGTGAAACTCCTCTGTAAGTACTCTTCATATTTTTAATTTACTCAGCAGATATGTAGAAAAATACTTCTCATTTGCCATCTTTTTTTTAGGAGGAAATGCAAAAAGTATCATATAAAAGGCGAAAAAAAAGGATCCGTGGATATGTTTGTTGATAATTTACCTGGATTTCCTGACAACATTCGTTACGATGGTGAAGGGCATTATTGGATTGCATTTGCCTCGGTTAGTTTCTTCATAACATTTAAATTTAATGTGTTCAA-C---AGGGTACACTGCTCTCTCATATTTTGTTTCTGATAACTTGAACAGGAAAACACATATTCATGGGACTTGACCCTAAAGTACCCATTCATCAGAAAGATAATGGCTATAATGGTGAAATATGTTGGACAACCAAAGACAGAGAAAAATGGTGGTGTTTTATCTGTTGATTTACAAGGAAATCCACTGGAACACTATTATGATGAGGATTTGACAATGGTGTCAAGTGGCATTAAGATTGGTGATCATTTGTACTGTGGCTCTGTTAAGTCTCCGTATATACTACGCCTCAATCTCAAACAATATCCTGCCGTTTAAACTTCATAAACAAAAATGTAAGTGTTTGATTTCAAAAAATAATGGGTGTATTTGTTAGTACAAGTATATTCGTTCAATTTTGCAT-AAGATTTCCACTA-TATAAGATGTGTAAGTGTTTTCTTTTTAATTTATTATAAATAATAATAAGAGTCAGCATATGCAACTAAATCATGATCTTCTTTTTGTATGTATTTAATTCTATGAAATTTAATAGGATAAACATTTTTATTGAAATTCTTTTTTACACCTTTGGTAAAAAAATAAATCAATCAATATTTTTAAAAATATTATAAATTAATATACTACTAAGTATTACAAATGATTTATTACATTTAAACATGTAAATTGTACAATCTACTTTGCTACTTACAAATTATGTTAAATCTACTTAGGTTAAATAAATTATATCCTCTCATTAACAAGTTTCAGCATGGAATAAATGGACTGCACATATTCAAATTTACCTCTCCATTTTAACTATATTTTAAAATTAATTTGAACTCCATAAAGGGCAAAAACAAAATATTTTCCTAATGACCAAGTGACATATTAAAGCAAGAGTTTAACAAATAACAAAATTGTTAAATTTCAGATCATACGGCGCCAAATTTGATTTTTTTTCCTTTTTTAACCGAAGGATTAGCAAATCTTTGAGAACTGATTTTTCATATTGTTTTTAACTAATTAATAGTTTTTTTCTTTGTCTCGATTTATTATGACAAGCTTGAAATCTTAAACTTTTTAAAATA-AAATTTATATATTTAAAAATTAAAATATAAATTAAAAACTACTATAAATGACAGACAATATAAAAGATATAAAAAAAA</genome_strand>
        <mrna_strand>CCGTTGTTACTTCTGAGGGTGAAATTAAAGTGCTAACAGAGGAAGCTGAAGGCCTGAAATTGAAATTGGCAGACGCTGTAGACGTTGCAGAGGATGGAATTATATATTTCTCCGATGCTTCTTACAAATATAACATCGAACAATACATTTATGATTTTCTTGAAGGAAGACCCCATGGAAGATTGTTAAGTTATGATCCATCAACTAAACAGACCAAAACGCTACTTAGCAATCTGCATTTTGCTAATGGCGTTGCAGTCTCTCCTGATCAAAATTATGTTATCTTCTGTGAAACTCCTCT............................................................................GAGGAAATGCAAAAAGTATCATATAAAAGGCGAAAAAAAAGGATCCGTCGATATGTTTGTTGATAATTTACCTGGATTTCCTGACAACATTCGTTACGATGGTGAAGGGCATTATTGGATTGCATTTGCCTCGGTTAGTTTCTTCATAACATTTAAATTTGATGTGTTCAATCTTTAGGGTACACCGCTCTCTCATATTTTGTTTCTGATAACTTGAACAGGAAAACACATATTCATGGGACTTGGCACTAAAGTACCCATTCATCAGAAAGATAATGGCTATAATGGTGAAATATGTTGGACAACCAAAGGCAGAGAAAAATGGTGGTGTTTTATCTGCTGATTTACAAGGAAATCCACTGGAACACTATTATGATGAGGATTTGACAATGGTGTCAAGTGGCATTAAGATTGGTGATCATTTGTACTGTGGCTCTGTTAAGTCTCCGTATATACTACGCCTCAATCTCAAACAATATCCTGCCGTTCAAACTTCATAAACAAAGAT..............................................................GACCATGACCATTTTC-CTAGTAT-AGAAATGTAAGTG-TTTGATTTCAAAAAATAATGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTATTTGTTACTACAAG-TAGAGTCGTTCAATTTTGCATAAGATTTAGTGTTTTCTTTTTAATTTATTATAAAAAGTAAAAA--A-AATTCAGCATATGCAA-CTAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0031D11-98q2S/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U578511" ref_strand="+" ref_description="SGN-U578511 Tomato 200607#2 [20 ESTs aligned] (*GB) gi|157329815|emb|CAO42645.1| (e_value=1e-130) unnamed; (*ATH) AT3G51440.1 (e_value=6e-119)  Symbol: None | strictosidine synthase family protein, similar to hemomucin (Drosophila melanogaster)(GI:1280434), strictosidine synthase (Rauvolfia serpentina)(SP:P15324); contains strictosidine synthase domain PF03088 | chr3:19100060-19101618 FORWA... ; (*SWP) sp|Q9D7N9|APMAP_MOUSE (e_value=7e-42) Adipocyte plasma membrane-associated protein OS=Mus musculus GN=Apmap; ">
      <seq>ataggaaccaaattttatttttttgttatgataagaatggaaacaaagaggaatacgagtcaacacataccttcttctttgctgacgatttgttattatctcaaatgttaatccttcatctgctcttctattcacactagccccaatttcttcttcttcttctacaataacaactgcaaatatgacttctccctccatctttctaaaccctatttttatttcactaataatacccgttattctaggtacggttttctatcaactcgattccttcgacccggtttcttatccgacccatgtgctctctactgacccgcctattgttgcaccaaagcgcaataaccaggtgctccgtggctccgaaaacatcggagttaaccagctattagcacccgaagacgtagcctacgatccggaatcgggagttatatacactgcgtgtgttgatgggtgggttaaaaaagtgaaagtcaacgaatcggcggcggattccacggtggaggattgggttttcaccggtggcagacctctcgggcttgctctaggacatcacggcgaagttatcgttgcagattcagaaaagggattattactcaacgttacttctgagggtgaaattaaagtgctaacagaggaagctgaaggcctgaaattgaaattggcagacgctgtagacgttgcagaggatggaattatatatttctccgatgcttcttacaaatataatatcgaacaatacatttatgattttcttgaaggaagaccccatggaagattgttaagttatgatccatcaactaaacagactaaaacgctacttagcaacctgcattttgctaatggcgttgcagtctctccagatcaaaattatgttatcttctgtgaaactcctctgaggaaatgcaaaaagtatcatataaaaggcgaaaaaaaaggatccgtggatatgtttgttgataatttacctggatttcctgacaacattcgttacgatggtgaagggcattattggattgcatttgcctcggaaaacacatattcatgggacttgaccctaaagtacccattcatcagaaagataatggctataatggtgaaatatgttggacaaccaaagacagagaaaaatggtggtgttttatctgttgatttacaaggaaatccactggaacactattatgatgaggatttgacaatggtgtcaagtggcattaagattggtgatcatttgtactgtggctctgttaagtctccgtatatactacgcctcaatctcaaacaatatcctgccgtttaaacttcataaacaaaaatgtaagtgtttgatttcaaaaataatgggtgtatttgttagtacaagtatattcgttcaattttgca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0031D11-98q2S/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0031D11.1" temp_strand="-" temp_description="C02SLe0031D11.1  AC215451.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0031D11 sequenced_by:kribb upload_account_name:korea">
        <position start="78161" stop="74718"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="77861" g_stop="77279" g_length="583"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="583" r_length="583" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="77278" i_stop="75976" i_length="1303">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.912" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="75975" g_stop="75665" g_length="311"/>
          <reference_exon_boundary r_type="cDNA" r_start="584" r_stop="894" r_length="311" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="75664" i_stop="75589" i_length="76">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="75588" g_stop="75456" g_length="133"/>
          <reference_exon_boundary r_type="cDNA" r_start="895" r_stop="1027" r_length="133" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="75455" i_stop="75372" i_length="84">
            <donor d_prob="0.982" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="75371" g_stop="75018" g_length="354"/>
          <reference_exon_boundary r_type="cDNA" r_start="1028" r_stop="1380" r_length="353" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0031D11.1" gen_strand="-" ref_id="SGN-U578511" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>1381</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0031D11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U578511" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="77861" e_stop="77279"/>
          <exon e_start="75975" e_stop="75665"/>
          <exon e_start="75588" e_stop="75456"/>
          <exon e_start="75371" e_stop="75018"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATAGGAACCAAATTTTATTTTTTTGTTATGATAAGAATGGAAACAAAGAGGAATACGAGTCAACACATACCTTCTTCTTTGCTGACGATTTGTTATTATCTCAAATGTTAATCCTTCATCTGCTCTTCTATTCACACTAGCCCCAATTTCTTCTTCTTCTTCTACAATAACAACTGCAAATATGACTTCTCCCTCCATCTTTCTAAACCCTATTTTTATTTCACTAATAATACCCGTTATTCTAGGTACGGTTTTCTATCAACTCGATTCCTTCGACCCGGTTTCTTATCCGACCCATGTGCTCTCTACTGACCCGCCTATTGTTGCACCAAAGCGCAATAACCAGGTGCTCCGTGGCTCCGAAAACATCGGAGTTAACCAGCTATTAGCACCCGAAGACGTAGCCTACGATCCGGAATCGGGAGTTATATACACTGCGTGTGTTGATGGGTGGGTTAAAAAAGTGAAAGTCAACGAATCGGCGGCGGATTCCACGGTGGAGGATTGGGTTTTCACCGGTGGCAGACCTCTCGGGCTTGCTCTAGGACATCACGGCGAAGTTATCGTTGCAGATTCAGAAAAGGTCAATTTTCTTTTTCTTTTTCTTTTTCTTTTGGGAAGAAATTGTTGATTAATAAAGGAATGAAAAAAAGTCTGACATACCCTTGAGCACATGCCCTTAGTTATCGATGTATACCCTACCATTATAATTTGTTACTTATTCCTATGTTTAGTACATGATCAGAAAATGGATATATTGATTGATGTTTTATTTTGAAAATATTATTTACTGTTTTAAAAAGGATGATGTTATTTATTTTTTAATATGCTTAGAAGGAAATAATTATTTTTTTTGGCAACACTTTAATTTTAAAGGACATTTTCACATAACTTTAATTTAGAAATACGTTTTTTTTTAAACTCTGTTTCAAGTTAGGTTTCATTTGTTTTCATTAAGATTTAGAGGTTTGAATCTGAATACACATCTGAATATTAAGAGTTGCATTAAGATTCAGGTGTTTTGATCTGAATATTAAAATTTGATCTTTAAATCTAAACATTTTTTGTTTTCAATAGCTAAATGTGCATGTGAAATTAACATTAATTAATAAAATGTCATAAAAAAAATTATTCCAATACATCAACAGTGTTTACAAGAAAATTATTAATATAAGAAAATACTTGAAGGATATATGAAATCTTACTAGTTCAAGAGGGAAAAAATGGTATTTGATTGAGAAAAGAGATTTTTTTTTTTTAATTATGAGATAAAAAGGCACACTCAAAGCAGAAAAACGATGATTTATTATTTGATAACTTATCAAATGAATCTTGTTAAGAATCTCCTACAAATCTGATTCATTCAAACCTCTTCATACCCATTAAGAGCCTTTTAAAAAAATAAAATAAGTGAATTTAATGTAGTGAATTTGAATGATTCAGATTAAGACCTAAAAATCAAATGTAATTAATAGGCTGAATTTGAATGATTAAGATTCAGATCTCTATTAAGTGCAGACAAATAAGACTTATACTAGGTTATTCTTTTTCAAACGATTTTGCAACGGTGGAAGTATTACTATCTAATAATGAAACTGATAAATATGGAGATACATTGGTTACATTAATGGTAATTGTTCAATAAATTACGATACAGAGGTAGCATAGTAGACAAATAATAGTCACGCGTGAAATTGCACGCAGGACTATTTTGTTTTGATGGTATGACTACAACGGAAATATAAAAATCACACCATTTTCGAGTGATAACAGTGAGATCTGAAGACAAGATATCTTAATTCCTCCGTATTTACACTATTTTGATATCAGTTCAGTATAAAATAACCTTGTATAATTATTTAGAATGAAATGTTTAAGTGTGACAGGGATTATTACTCAACGTTACTTCTGAGGGTGAAATTAAAGTGCTAACAGAGGAAGCTGAAGGCCTGAAATTGAAATTGGCAGACGCTGTAGACGTTGCAGAGGATGGAATTATATATTTCTCCGATGCTTCTTACAAATATAATATCGAACAATACATTTATGATTTTCTTGAAGGAAGACCCCATGGAAGATTGTTAAGTTATGATCCATCAACTAAACAGACTAAAACGCTACTTAGCAACCTGCATTTTGCTAATGGCGTTGCAGTCTCTCCAGATCAAAATTATGTTATCTTCTGTGAAACTCCTCTGTAAGTACTCTTCATATTTTTAATTTACTCAGCAGATATGTAGAAAAATACTTCTCATTTGCCATCTTTTTTTTAGGAGGAAATGCAAAAAGTATCATATAAAAGGCGAAAAAAAAGGATCCGTGGATATGTTTGTTGATAATTTACCTGGATTTCCTGACAACATTCGTTACGATGGTGAAGGGCATTATTGGATTGCATTTGCCTCGGTTAGTTTCTTCATAACATTTAAATTTAATGTGTTCAACAGGGTACACTGCTCTCTCATATTTTGTTTCTGATAACTTGAACAGGAAAACACATATTCATGGGACTTGACCCTAAAGTACCCATTCATCAGAAAGATAATGGCTATAATGGTGAAATATGTTGGACAACCAAAGACAGAGAAAAATGGTGGTGTTTTATCTGTTGATTTACAAGGAAATCCACTGGAACACTATTATGATGAGGATTTGACAATGGTGTCAAGTGGCATTAAGATTGGTGATCATTTGTACTGTGGCTCTGTTAAGTCTCCGTATATACTACGCCTCAATCTCAAACAATATCCTGCCGTTTAAACTTCATAAACAAAAATGTAAGTGTTTGATTTCAAAAAATAATGGGTGTATTTGTTAGTACAAGTATATTCGTTCAATTTTGCA</genome_strand>
        <mrna_strand>ATAGGAACCAAATTTTATTTTTTTGTTATGATAAGAATGGAAACAAAGAGGAATACGAGTCAACACATACCTTCTTCTTTGCTGACGATTTGTTATTATCTCAAATGTTAATCCTTCATCTGCTCTTCTATTCACACTAGCCCCAATTTCTTCTTCTTCTTCTACAATAACAACTGCAAATATGACTTCTCCCTCCATCTTTCTAAACCCTATTTTTATTTCACTAATAATACCCGTTATTCTAGGTACGGTTTTCTATCAACTCGATTCCTTCGACCCGGTTTCTTATCCGACCCATGTGCTCTCTACTGACCCGCCTATTGTTGCACCAAAGCGCAATAACCAGGTGCTCCGTGGCTCCGAAAACATCGGAGTTAACCAGCTATTAGCACCCGAAGACGTAGCCTACGATCCGGAATCGGGAGTTATATACACTGCGTGTGTTGATGGGTGGGTTAAAAAAGTGAAAGTCAACGAATCGGCGGCGGATTCCACGGTGGAGGATTGGGTTTTCACCGGTGGCAGACCTCTCGGGCTTGCTCTAGGACATCACGGCGAAGTTATCGTTGCAGATTCAGAAAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATTATTACTCAACGTTACTTCTGAGGGTGAAATTAAAGTGCTAACAGAGGAAGCTGAAGGCCTGAAATTGAAATTGGCAGACGCTGTAGACGTTGCAGAGGATGGAATTATATATTTCTCCGATGCTTCTTACAAATATAATATCGAACAATACATTTATGATTTTCTTGAAGGAAGACCCCATGGAAGATTGTTAAGTTATGATCCATCAACTAAACAGACTAAAACGCTACTTAGCAACCTGCATTTTGCTAATGGCGTTGCAGTCTCTCCAGATCAAAATTATGTTATCTTCTGTGAAACTCCTCT............................................................................GAGGAAATGCAAAAAGTATCATATAAAAGGCGAAAAAAAAGGATCCGTGGATATGTTTGTTGATAATTTACCTGGATTTCCTGACAACATTCGTTACGATGGTGAAGGGCATTATTGGATTGCATTTGCCTCG....................................................................................GAAAACACATATTCATGGGACTTGACCCTAAAGTACCCATTCATCAGAAAGATAATGGCTATAATGGTGAAATATGTTGGACAACCAAAGACAGAGAAAAATGGTGGTGTTTTATCTGTTGATTTACAAGGAAATCCACTGGAACACTATTATGATGAGGATTTGACAATGGTGTCAAGTGGCATTAAGATTGGTGATCATTTGTACTGTGGCTCTGTTAAGTCTCCGTATATACTACGCCTCAATCTCAAACAATATCCTGCCGTTTAAACTTCATAAACAAAAATGTAAGTGTTTGATTTC-AAAAATAATGGGTGTATTTGTTAGTACAAGTATATTCGTTCAATTTTGCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0031D11-98q2S/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U592849" ref_strand="+" ref_description="SGN-U592849 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>aatacgagtcaacacatttcttcttctgggctgactatttgttattatgtgaaatgcccatccttcatctgctcttctattcacactaaccccaatttcttcttcttcttctacaataacaactgcaaatatgacttctccctccatctttctaaaccctattcttatttcactaataatacccgttattctaggtacgggtttctatcaactcgattccttcgacccgggttcttatccgacccatgtgctctctactgacccgcctattgttgcaccaaagcgcaataaccaggtgctccgtggctccgaaaacatcggagttaaccagcta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0031D11-98q2S/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0031D11.1" temp_strand="-" temp_description="C02SLe0031D11.1  AC215451.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0031D11 sequenced_by:kribb upload_account_name:korea">
        <position start="78110" stop="77177"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="77810" g_stop="77477" g_length="334"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="334" r_length="334" r_score="0.958"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0031D11.1" gen_strand="-" ref_id="SGN-U592849" ref_strand="+">
        <total_alignment_score>0.958</total_alignment_score>
        <cumulative_length_of_scored_exons>334</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0031D11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U592849" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="77810" e_stop="77477"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATACGAGTCAACACATACCTTCTTCTTTGCTGACGATTTGTTATTATCTCAAATGTTAATCCTTCATCTGCTCTTCTATTCACACTAGCCCCAATTTCTTCTTCTTCTTCTACAATAACAACTGCAAATATGACTTCTCCCTCCATCTTTCTAAACCCTATTTTTATTTCACTAATAATACCCGTTATTCTAGGTACGGTTTTCTATCAACTCGATTCCTTCGACCCGGTTTCTTATCCGACCCATGTGCTCTCTACTGACCCGCCTATTGTTGCACCAAAGCGCAATAACCAGGTGCTCCGTGGCTCCGAAAACATCGGAGTTAACCAGCTA</genome_strand>
        <mrna_strand>AATACGAGTCAACACATTTCTTCTTCTGGGCTGACTATTTGTTATTATGTGAAATGCCCATCCTTCATCTGCTCTTCTATTCACACTAACCCCAATTTCTTCTTCTTCTTCTACAATAACAACTGCAAATATGACTTCTCCCTCCATCTTTCTAAACCCTATTCTTATTTCACTAATAATACCCGTTATTCTAGGTACGGGTTTCTATCAACTCGATTCCTTCGACCCGGGTTCTTATCCGACCCATGTGCTCTCTACTGACCCGCCTATTGTTGCACCAAAGCGCAATAACCAGGTGCTCCGTGGCTCCGAAAACATCGGAGTTAACCAGCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0031D11-98q2S/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U584932" ref_strand="+" ref_description="SGN-U584932 Tomato 200607#2 [2 ESTs aligned] (*GB) gi|157328757|emb|CAO22793.1| (e_value=5e-32) unnamed; (*ATH) AT1G20560.2 (e_value=4e-27) |; (*SWP) sp|A7GU88|MENE_BACCN (e_value=2e-14) 2-succinylbenzoate--CoA ligase OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=menE; ">
      <seq>tgaaggatcgcgctgttgacgtagtcaaaactgatgggaaaactataagcacacttgaaattgaaggtgttttgattaggcatcctatggttttggaagttgcagttgtagcaagatgtgatgatgttcttggagagaccccttgtgcttttgtgaaactgaaaaaagggtgttttatgactgatgaagaaattatcaagttttgtgaagattggctgcaggattacatggttcctaaggcagtaatctttggtgatttaccattcaattcttcagggaaaatacagaaatttatacttagggacaaggtcaacaatgcaatgaagttgtgtctacaagttgggtgcaactcagttggcgagctgcccacaccttcatcctagtggtggggattcgaatttcgatatattccctccccaccat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0031D11-98q2S/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0031D11.1" temp_strand="-" temp_description="C02SLe0031D11.1  AC215451.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0031D11 sequenced_by:kribb upload_account_name:korea">
        <position start="85527" stop="84505"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="85227" g_stop="84805" g_length="423"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="423" r_length="423" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0031D11.1" gen_strand="-" ref_id="SGN-U584932" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>423</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0031D11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U584932" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="85227" e_stop="84805"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAAGGATCGCGCTGTTGACGTAGTCAAAACTGATGGGAAAACTATAAGCACACTTGAAATTGAAGGTGTTTTGATTAGGCATCCTATGGTTTTGGAAGTTGCAGTTGTAGCAAGATGTGATGATGTTCTTGGAGAGACCCCTTGTGCTTTTGTGAAACTGAAAAAAGGGTGTTTTATGACTGATGAAGAAATTATCAAGTTTTGTGAAGATTGGCTGCAGGATTACATGGTTCCTAAGGCAGTAATCTTTGGTGATTTACCATTCAATTCTTCAGGGAAAATACAGAAATTTATACTTAGGGACAAGGTCAACAATGCAATGAAGTTGTGTCTACAAGTTGGGTGCAACTCAGTTGGCGAGCTGCCCACACCTTCATCCTAGTGGTGGGGATTCGAATTTCGATATATTCCCTCCCCACCAT</genome_strand>
        <mrna_strand>TGAAGGATCGCGCTGTTGACGTAGTCAAAACTGATGGGAAAACTATAAGCACACTTGAAATTGAAGGTGTTTTGATTAGGCATCCTATGGTTTTGGAAGTTGCAGTTGTAGCAAGATGTGATGATGTTCTTGGAGAGACCCCTTGTGCTTTTGTGAAACTGAAAAAAGGGTGTTTTATGACTGATGAAGAAATTATCAAGTTTTGTGAAGATTGGCTGCAGGATTACATGGTTCCTAAGGCAGTAATCTTTGGTGATTTACCATTCAATTCTTCAGGGAAAATACAGAAATTTATACTTAGGGACAAGGTCAACAATGCAATGAAGTTGTGTCTACAAGTTGGGTGCAACTCAGTTGGCGAGCTGCCCACACCTTCATCCTAGTGGTGGGGATTCGAATTTCGATATATTCCCTCCCCACCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0031D11-98q2S/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U601166" ref_strand="+" ref_description="SGN-U601166 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|157328757|emb|CAO22793.1| (e_value=3e-19) unnamed; (*ATH) AT1G20560.2 (e_value=2e-17) |; ">
      <seq>cgtgaaggggttcacaacattatgatggaagaagttgatgtaaaagatccagagagtatgaaaagtgtaccagcagatggaaaaatcacaggggaaatcatgtttagaggcaatgctatgatgatggggtacttgaaagattcatcaagaactgaagaagcttttgagggagggtggtataggactaaagatcttggtgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0031D11-98q2S/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0031D11.1" temp_strand="-" temp_description="C02SLe0031D11.1  AC215451.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0031D11 sequenced_by:kribb upload_account_name:korea">
        <position start="85753" stop="84954"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="85453" g_stop="85254" g_length="200"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="200" r_length="200" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0031D11.1" gen_strand="-" ref_id="SGN-U601166" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>200</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0031D11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U601166" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="85453" e_stop="85254"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGTGAAGGGGTTCACAACATTATGATGGAAGAAGTTGATGTAAAAGATCCAGAGAGTATGAAAAGTGTACCAGCAGATGGAAAAACCACAGGGGAAATCATGTTTAGAGGCAATGCTATGATGATGGGGTACTTGAAAGATTCATCAAGAACTGAAGAAGCTTTTGAGGGAGGGTGGTATAGGACTAAAGATCTTGGTGT</genome_strand>
        <mrna_strand>CGTGAAGGGGTTCACAACATTATGATGGAAGAAGTTGATGTAAAAGATCCAGAGAGTATGAAAAGTGTACCAGCAGATGGAAAAATCACAGGGGAAATCATGTTTAGAGGCAATGCTATGATGATGGGGTACTTGAAAGATTCATCAAGAACTGAAGAAGCTTTTGAGGGAGGGTGGTATAGGACTAAAGATCTTGGTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0031D11-98q2S/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U598791" ref_strand="+" ref_description="SGN-U598791 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|157328757|emb|CAO22793.1| (e_value=4e-70) unnamed; (*ATH) AT2G17650.1 (e_value=9e-67)  Symbol: None | AMP-dependent synthetase and ligase family protein, similar to AMP-binding protein GI:1903034 from (Brassica napus); contains Pfam AMP-binding domain PF00501; identical to cDNA adenosine monophosphate binding protein 2 AMPBP2 (AMPBP2)... ; (*SWP) sp|Q00594|ALKK_PSEOL (e_value=2e-16) Medium-chain-fatty-acid--CoA ligase OS=Pseudomonas oleovorans GN=alkK; ">
      <seq>gggattggtagtttgccctgcaaaccacgtaccattgacacctctaagttttttggaacgtgctgcatttgtttaccgcaaaaacatagccttaatttatggaaacataagttattcatgggaagaattacatggaagatgtatcaaccttgcatctgctctttctcaacttggagtttcatctggtgatgttgtggcaacggtggcacctaatgtagcagcacaatatgagctacattttggtgtaccaatggctggtgcagtcctttctgcactcaacacaatgctagatgccaccacattggctcaaaaactccaacaattggaggccaaaatcatttttgtatactctgatttcattgaactagtgcttcaagcacttgccattcttcaagaaaaagacaaatcttgtctaattgtcttaatccatgaaggaaacaatgtaacaaaaccaccagtgtcatcatcagggccatcaaaaattctggattaccaaacacttcttgaaatggggcagcctaatttcaagattatgcatccgaaaaatgaatttgatccgatttcgatcaattttacttctggatcaacagggaagcctaaaggggctgtgtatagccatagagctgcttatttgaatacaattgctgacatttttcgatacgaaatgggaaaaagccctgtttttctctggacagtggatatgtttcgatgcaacgggtggtgtctcccctggacattgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0031D11-98q2S/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0031D11.1" temp_strand="-" temp_description="C02SLe0031D11.1  AC215451.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0031D11 sequenced_by:kribb upload_account_name:korea">
        <position start="89425" stop="85497"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="89125" g_stop="88933" g_length="193"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="193" r_length="193" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="88932" i_stop="86345" i_length="2588">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="86344" g_stop="85797" g_length="548"/>
          <reference_exon_boundary r_type="cDNA" r_start="194" r_stop="740" r_length="547" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0031D11.1" gen_strand="-" ref_id="SGN-U598791" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>741</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0031D11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U598791" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="89125" e_stop="88933"/>
          <exon e_start="86344" e_stop="85797"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGGATTGGTAGTTTGCCCTGCAAACCACGTACCATTGACACCTCTAAGTTTTTTGGAACGTGCTGCATTTGTTTACCGCAAAAACATAGCCTTAATTTATGGAAACATAAGTTATTCATGGGAAGAATTACATGGAAGATGTATCAACCTTGCATCTGCTCTTTCTCAACTTGGAGTTTCATCTGGTGATGTTGTAAGTCTAATTTCATCCTTTCACTTGCTCCTCCATCTTCAATATATATTTGTGTACTACACAAACATATTTATTCTGCTCATGCTTCAGACAATCTGAATAATTCTATATACACATATATAGGTGCGCCATTTATATAGCCGAGAGTAGTTGCACTTGATTTATCTCCATTCAAGATCTATGTTTTTTTTATTTTCTTTAAACTCTTTCGTAACATAAATATGATTAAGAACTCCCTGACGTGAAAATAATATTTTACACGTATAAACTAGACTAGAATTAGATCTAGTTCTTTGGACTTTAAATATACTATGATTTTGATCCTTTTAATTTCATGCATGCCAATTATTTTCTTTTAAGGCAAAAGTTAATTAGTAGAAGTGAGCCATTAGAGACTTGATATATTAACCAAGTCAACAGGCGCATTCATTCACCCAAATTAATTGATGCGTTGAAGAAGGGTTATTAATTATCATTTTTTTTTACGTTTACATTTACACTTATAATAAAAAGAAGAATCGACAACAAACTTTAATTCCTCCACTTAATTCTTAGTTGATAAAAGCATAATAATTATGTCCCTTGCGAAGATAGACTTGACTTACGTATATGGTTCTACTTCTCTCATATTTATTATCTCACGCATTGACTTGACCAGCTAGATGTTAAAGAATGAAAAAATTCATATCGATAATTAAAGAAATGAATGGTTAGATTTAAATAATTCTCTTATTTGAGATAGTTTTTAGGGTATGACTTACACCTAGCTGTTAGAACCAAATTTTAAAGTTGTCCACGCTTAAAATGTTCAAAAACCTGAGCTTGAGGTGGATGTTAAAGAATGAAAATTTTTTCATCGATGATTAATGAGATGAATAATCTTCTTATAAATCTAAGACAATTCTTTATCCTTTAAATTAATGTTTAGAGCATGATAAGTCCAAGATCTAATTTTACACTAACTACTTTATTAGTAAGTCATTGTATAAGATTATAGGAATATATGTTGAGGGGTCTTTTTCCATTAACAAACCATTTCTTGTCTTCTTACTACATATTCGAAACCATTTTGAGTGCTCATACTTGTAATAGTAACGACAAAACAGCCCCCTCGAGTTTCATTGCTCTTATATTTCCTTTGGCTTTCTCTCTATAAAACTCTGGAAAAACGTTCATAACTTGCGTAATGGTGTCAAAATTAGGGGCTGAATGAGGACAAATTCACAATGTCACGTAAAAACGATTAGTTAATTATAAGTCATGTAATATAGTAATGTAATTAGATGAAAATTTGTGTTGTCTTAACTCACATACTAAATATGTAATGAACACATAGATTATATATACTATATATTATAATATATACTAAGTACTAACAATATATATATATATATATTTATATATAAATTACTATTTCATGCTTTAAAAACGATAAAAATAGGAGCAATCATGTGTAACGGTGTGAATACACGTTTTGACTTCTTTTTTTCTTGTTTGAGTGCTTTATTATTTTTAAGAAAAAAGTTTCTATTTTCATTCTTTTTTATTTAACAAATGAGCTAGACCACAAGTCTTCGTCTCAAATTGTAATTAAATACGTGTCACATCAAATTTAATATTTTAGAGCAGAGCATATATGCACATGATGATACACCTTGAAGGGGGAATTTAATTCTTTTCTTATATTAGTGTTATATTATAATCAAAACTCCTTAGTACTTGTATCTTTTTTTCCCTCATTCTGCATGAGCCTGTCCTGGCTGTGATTTAAAATTGTACAATTTATTGACTTTGTCACGTTTAGCAATGTGTTAAAGACCCACGTTATGAAAAATAAATAAATTGATGACTAGGTACAATTGATATGCGTAATTACGACCAGAGGAAAACATCTAGATACATGGAACTTGCTCAATAGTACTAAATAAGTCAATGGACTTAAATATTGTTTGGAAGCTCTCTCGAAATCATATTATTTAATTTAGTTTGACATAAATATTGAATATACATAGATAGTTTGTTATGTCTCTCGTATAACAATGTTGGGGATGGAATATGGATGCACAATTAAAATTACGGTGTAACCTAATAGTTTTAGCTCTTTCTTATATACATGTTCAAATTCTAGTTAGTATTAAATTCGAACAGATAATACTCATATGTTCATTATTATTTTATCTAGTTAATATTAACAAATCAAGAAAGAGTTATTATTTACTTTTAATATCACTTTTCATCGAAAATCTTAGTAGCTCAATTGATTGGCTACTTGAACTCTCAGCTTGTTGATAAAAATTTGATTCTCCATATAGTAATCTACTCCCCATTTCTTTTTCCCCTTCCCCTTCCCCTGCCTTCAATTTTCCTTTTTTTTTCTTCTAAAAAGATAATATATATCACTCTTCATTGAATAATACAAGTTCTTAGATTATATTGTGAATCCATAAACTTCAAATTCTAGTTGTTACGCTGAGTCCAAACCTTCTTTCGTTTTTCTCTTTGCTCTTATTTGTAGCTTATATTGTCATACGTAACTAATTAAAACAAGCTTAATTTATGCGCTTATTAATCTTAACTAATACAAACAGGTGGCAACGGTGGCACCTAATGTAGCAGCACAATATGAGCTACATTTTGGTGTACCAATGGCTGGTGCAGTCCTTTCTGCACTCAACACAATGCTAGATGCCACCACATTGGCTCAAAAACTCCAACAATTGGAGGCCAAAATCATTTTTGTATACTCTGATTTCATTGAACTAGTGCTTCAAGCACTTGCCATTCTTCAAGAAAAAGACAAATCTTGTCTAATTGTCTTAATCCATGAAGGAAACAATGTAACAAAACCACCAGTGTCATCATCAGGGCCATCAAAAATTCTGGATTACCAAACACTTCTTGAAATGGGGCAGCCTAATTTCAAGATTATGCATCCGAAAAATGAATTTGATCCGATTTCGATCAATTTTACTTCTGGATCAACAGGGAAGCCTAAAGGGGCTGTGTATAGCCATAGAGCTGCTTATTTGAATACAATTGCTGACATTTTTCGATACGAAATGGGAAAAAGCCCTGTTTTTCTCTGGACAGTGGATATGTTTCGATGCAACGGGTGGTGTCTCCCCTGGACAATTGC</genome_strand>
        <mrna_strand>GGGATTGGTAGTTTGCCCTGCAAACCACGTACCATTGACACCTCTAAGTTTTTTGGAACGTGCTGCATTTGTTTACCGCAAAAACATAGCCTTAATTTATGGAAACATAAGTTATTCATGGGAAGAATTACATGGAAGATGTATCAACCTTGCATCTGCTCTTTCTCAACTTGGAGTTTCATCTGGTGATGTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGCAACGGTGGCACCTAATGTAGCAGCACAATATGAGCTACATTTTGGTGTACCAATGGCTGGTGCAGTCCTTTCTGCACTCAACACAATGCTAGATGCCACCACATTGGCTCAAAAACTCCAACAATTGGAGGCCAAAATCATTTTTGTATACTCTGATTTCATTGAACTAGTGCTTCAAGCACTTGCCATTCTTCAAGAAAAAGACAAATCTTGTCTAATTGTCTTAATCCATGAAGGAAACAATGTAACAAAACCACCAGTGTCATCATCAGGGCCATCAAAAATTCTGGATTACCAAACACTTCTTGAAATGGGGCAGCCTAATTTCAAGATTATGCATCCGAAAAATGAATTTGATCCGATTTCGATCAATTTTACTTCTGGATCAACAGGGAAGCCTAAAGGGGCTGTGTATAGCCATAGAGCTGCTTATTTGAATACAATTGCTGACATTTTTCGATACGAAATGGGAAAAAGCCCTGTTTTTCTCTGGACAGTGGATATGTTTCGATGCAACGGGTGGTGTCTCCCCTGGAC-ATTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0031D11-98q2S/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U581507" ref_strand="+" ref_description="SGN-U581507 Tomato 200607#2 [59 ESTs aligned] (*GB) gi|544007|sp|Q05539|CHIA_SOLLC (e_value=7e-149) RecName:; (*ATH) AT3G12500.1 (e_value=1e-74) | Symbol: None | basic endochitinase, identical to basic endochitinase precursor SP:P19171 from (Arabidopsis thaliana) | chr3:3962389-3963971 REVERSE | Aliases: T2E22.18; (*SWP) sp|Q05539|CHIA_SOLLC (e_value=5e-150) Acidic 26 kDa endochitinase OS=Solanum lycopersicum GN=CHI3; ">
      <seq>aagccagaggaaaaatgaagttcaatattgtatcacccgttgcactgtcttgtctctttttcttgttcctaacaggtactttagcacaaaatgccggttccattgtaacgcgggaattgttcgaacaaatgctgagttttaggaacaatgacgcatgtcctgccaaaggattctacacttatgatgcattcatagctgcagccaattcgtttccaggttttggtactgctggtgatgatactgcacgtaagaaggaaattgctgcctttttcggtcaaacatctcacgaaactaatggtggtagtgcaggaacattcactggaggatattgctttgttaagcaaatagagcagtcagacagatactatggcagaggacctatccaattgacacaccaatctaactacgaacgagctggacaaggtattggtgttggacaagagttagtgaacaaccctgatttagttgcgacagatcctataatatcattcaaaacagcaatatggttctggatgacagaacaggataataaaccatcatgccacaacgttatcattggacaatggacgccatcccctaaagatacagcagctaatagagttccagggtacggtgtcattaccaacatcattaacggtcaatttgaatgtgggatgggtccgaatactgcagcggaaagtcgaattggattttacaggaggtattgtggtatgttgaatgttcctactggtgaaaatttggactgtaacaatcaaaagaacttcgcccagggctaagcgtctttatttatatatagagagagaatgcaaattatgtttatgtattacgttgtgaagtctataagttatatttggatgtaatcaataaggggattctgtatgcccatttagaaaaatggaagtttattttcagaaatactaaagttatatgattttgatcttttgttataaaaaaaactcgagactagttctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0031D11-98q2S/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0031D11.1" temp_strand="+" temp_description="C02SLe0031D11.1  AC215451.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0031D11 sequenced_by:kribb upload_account_name:korea">
        <position start="93886" stop="95570"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="94186" g_stop="94482" g_length="297"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="297" r_length="297" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="94483" i_stop="94555" i_length="73">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="94556" g_stop="94652" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="298" r_stop="394" r_length="97" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="94653" i_stop="94713" i_length="61">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="94714" g_stop="95269" g_length="556"/>
          <reference_exon_boundary r_type="cDNA" r_start="395" r_stop="950" r_length="556" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0031D11.1" gen_strand="+" ref_id="SGN-U581507" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>950</cumulative_length_of_scored_exons>
        <coverage percentage="0.977" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0031D11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U581507" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="94186" e_stop="94482"/>
          <exon e_start="94556" e_stop="94652"/>
          <exon e_start="94714" e_stop="95269"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGCCAGAGGAAAAATGAAGTTCAATATTGTATCACCCGTTGCACTGTCTTGTCTCTTTTTCTTGTTCCTAACAGGTACTTTAGCACAAAATGCCGGTTCCATTGTAACGCGGGAATTGTTCGAACAAATGCTGAGTTTTAGGAACAATGACGCATGTCCTGCCAAAGGATTCTACACTTATGATGCATTCATAGCTGCAGCCAATTCGTTTCCAGGTTTTGGTACTGCTGGTGATGATACTGCACGTAAGAAGGAAATTGCTGCCTTTTTCGGTCAAACATCTCACGAAACTAATGGTAATTTGGATCATCCTTCTTAGCATTGTAATTTATAGGTAACAATTGAATTATATCATTCGCTCTTTTGCAGGTGGTAGTGCAGGAACATTCACTGGAGGATATTGCTTTGTTAAGCAAATAGAGCAGTCAGACAGATACTATGGCAGAGGACCTATCCAATTGACACAGTAAGACAATTCAATAGAATATCAACATTTGGAATCATTAGTAATATTCTTTTTTATGCAGCCAATCTAACTACGAACGAGCTGGACAAGGTATTGGTGTTGGACAAGAGTTAGTGAACAACCCTGATTTAGTTGCGACAGATCCTATAATATCATTCAAAACAGCAATATGGTTCTGGATGACAGAACAGGATAATAAACCATCATGCCACAACGTTATCATTGGACAATGGACGCCATCCCCTAAAGATACAGCAGCTAATAGAGTTCCAGGGTACGGTGTCATTACCAACATCATTAACGGTCAATTTGAATGTGGGATGGGTCCGAATACTGCAGCGGAAAGTCGAATTGGATTTTACAGGAGGTATTGTGGTATGTTGAATGTTCCTACTGGTGAAAATTTGGACTGTAACAATCAAAAGAACTTCGCCCAGGGCTAAGCGTCTTTATTTATATATAGAGAGAGAATGCAAATTATGTTTATGTATTACGTTGTGAAGTCTATAAGTTATATTTGGATGTAATCAATAAGGGGATTCTGTATGCCCATTTAGAAAAATGGAAGTTTATTTTCAGAAATACTAAAGTTATATGATTTTGATCTTTTGTTATAA</genome_strand>
        <mrna_strand>AAGCCAGAGGAAAAATGAAGTTCAATATTGTATCACCCGTTGCACTGTCTTGTCTCTTTTTCTTGTTCCTAACAGGTACTTTAGCACAAAATGCCGGTTCCATTGTAACGCGGGAATTGTTCGAACAAATGCTGAGTTTTAGGAACAATGACGCATGTCCTGCCAAAGGATTCTACACTTATGATGCATTCATAGCTGCAGCCAATTCGTTTCCAGGTTTTGGTACTGCTGGTGATGATACTGCACGTAAGAAGGAAATTGCTGCCTTTTTCGGTCAAACATCTCACGAAACTAATG.........................................................................GTGGTAGTGCAGGAACATTCACTGGAGGATATTGCTTTGTTAAGCAAATAGAGCAGTCAGACAGATACTATGGCAGAGGACCTATCCAATTGACACA.............................................................CCAATCTAACTACGAACGAGCTGGACAAGGTATTGGTGTTGGACAAGAGTTAGTGAACAACCCTGATTTAGTTGCGACAGATCCTATAATATCATTCAAAACAGCAATATGGTTCTGGATGACAGAACAGGATAATAAACCATCATGCCACAACGTTATCATTGGACAATGGACGCCATCCCCTAAAGATACAGCAGCTAATAGAGTTCCAGGGTACGGTGTCATTACCAACATCATTAACGGTCAATTTGAATGTGGGATGGGTCCGAATACTGCAGCGGAAAGTCGAATTGGATTTTACAGGAGGTATTGTGGTATGTTGAATGTTCCTACTGGTGAAAATTTGGACTGTAACAATCAAAAGAACTTCGCCCAGGGCTAAGCGTCTTTATTTATATATAGAGAGAGAATGCAAATTATGTTTATGTATTACGTTGTGAAGTCTATAAGTTATATTTGGATGTAATCAATAAGGGGATTCTGTATGCCCATTTAGAAAAATGGAAGTTTATTTTCAGAAATACTAAAGTTATATGATTTTGATCTTTTGTTATAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0031D11-98q2S/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U593206" ref_strand="+" ref_description="SGN-U593206 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|544007|sp|Q05539|CHIA_SOLLC (e_value=4e-61) RecName:; (*ATH) AT3G12500.1 (e_value=6e-22) | Symbol: None | basic endochitinase, identical to basic endochitinase precursor SP:P19171 from (Arabidopsis thaliana) | chr3:3962389-3963971 REVERSE | Aliases: T2E22.18; (*SWP) sp|Q05539|CHIA_SOLLC (e_value=3e-62) Acidic 26 kDa endochitinase OS=Solanum lycopersicum GN=CHI3; ">
      <seq>gaaaaatgaagttcaatattgtatcacccgttgcactgtcttgtctctttttcttgttcctaacaggtactttagcacaaaatgccggttccattgtaacgcgggaattgttcgaacaaatgctgagttttaggaacaatgacgcatgtcctgccaaaggattctacacttatgatgcattcatagctgcagccaattcgtttccaggttttggtactgctggtgatgatactgcacgtaagaaggaaattgctgcctttttcggtcaaacatctcacgaaactaatggtaatttggatcatccttcttagcattgtaatttataggtaacaattgaattatatcattcgctcttttgcaggtggtagtgcaggaacattcactggaggatattgctttgttaagcaaatagagcagtcagacagatactatggcagaggacctatccaattgacacagtaagacaattcaatagaatatcaacatttggaatcattagtaatattcttttttatgcagccaatctaactacgaacgagctggacaaggtattggtgttggac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0031D11-98q2S/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0031D11.1" temp_strand="+" temp_description="C02SLe0031D11.1  AC215451.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0031D11 sequenced_by:kribb upload_account_name:korea">
        <position start="93895" stop="95057"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="94195" g_stop="94757" g_length="563"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="563" r_length="563" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0031D11.1" gen_strand="+" ref_id="SGN-U593206" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>563</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0031D11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U593206" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="94195" e_stop="94757"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAAAATGAAGTTCAATATTGTATCACCCGTTGCACTGTCTTGTCTCTTTTTCTTGTTCCTAACAGGTACTTTAGCACAAAATGCCGGTTCCATTGTAACGCGGGAATTGTTCGAACAAATGCTGAGTTTTAGGAACAATGACGCATGTCCTGCCAAAGGATTCTACACTTATGATGCATTCATAGCTGCAGCCAATTCGTTTCCAGGTTTTGGTACTGCTGGTGATGATACTGCACGTAAGAAGGAAATTGCTGCCTTTTTCGGTCAAACATCTCACGAAACTAATGGTAATTTGGATCATCCTTCTTAGCATTGTAATTTATAGGTAACAATTGAATTATATCATTCGCTCTTTTGCAGGTGGTAGTGCAGGAACATTCACTGGAGGATATTGCTTTGTTAAGCAAATAGAGCAGTCAGACAGATACTATGGCAGAGGACCTATCCAATTGACACAGTAAGACAATTCAATAGAATATCAACATTTGGAATCATTAGTAATATTCTTTTTTATGCAGCCAATCTAACTACGAACGAGCTGGACAAGGTATTGGTGTTGGAC</genome_strand>
        <mrna_strand>GAAAAATGAAGTTCAATATTGTATCACCCGTTGCACTGTCTTGTCTCTTTTTCTTGTTCCTAACAGGTACTTTAGCACAAAATGCCGGTTCCATTGTAACGCGGGAATTGTTCGAACAAATGCTGAGTTTTAGGAACAATGACGCATGTCCTGCCAAAGGATTCTACACTTATGATGCATTCATAGCTGCAGCCAATTCGTTTCCAGGTTTTGGTACTGCTGGTGATGATACTGCACGTAAGAAGGAAATTGCTGCCTTTTTCGGTCAAACATCTCACGAAACTAATGGTAATTTGGATCATCCTTCTTAGCATTGTAATTTATAGGTAACAATTGAATTATATCATTCGCTCTTTTGCAGGTGGTAGTGCAGGAACATTCACTGGAGGATATTGCTTTGTTAAGCAAATAGAGCAGTCAGACAGATACTATGGCAGAGGACCTATCCAATTGACACAGTAAGACAATTCAATAGAATATCAACATTTGGAATCATTAGTAATATTCTTTTTTATGCAGCCAATCTAACTACGAACGAGCTGGACAAGGTATTGGTGTTGGAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0031D11-98q2S/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U578942" ref_strand="+" ref_description="SGN-U578942 Tomato 200607#2 [2 ESTs aligned] (*GB) gi|544007|sp|Q05539|CHIA_SOLLC (e_value=4e-135) RecName:; (*ATH) AT3G12500.1 (e_value=4e-65) | Symbol: None | basic endochitinase, identical to basic endochitinase precursor SP:P19171 from (Arabidopsis thaliana) | chr3:3962389-3963971 REVERSE | Aliases: T2E22.18; (*SWP) sp|Q05539|CHIA_SOLLC (e_value=2e-136) Acidic 26 kDa endochitinase OS=Solanum lycopersicum GN=CHI3; ">
      <seq>gttcaatattgtatcacccgttgcactgtcttgtctctttttcttgttcctaacaggtactttagcacaaaatgccggttccattgtaacgcgggaattgttcgaacaaatgctgagttttaggaacaatgacgcatgtcctgccaaaggattctacacttatgatgcattcatagctgcagccaattcgtttccaggttttggtactgctggtgatgatactgcacgtaagaaggaaattgctgcctttttcggtcaaacatctcacgaaactaatggtggtagtgcaggaacattcactggaggatattgctttgttaagcaaatagagcagtcagacagatactatggcagaggacctatccaattgacacagtaagacaattcaatagaatatcaacatttggaatcattagtaatattcttttttatgcagccaatctaactacgaacgagctggacaaggtattggtgttggacaagagttagtgaacaaccctgatttagttgcgacagatcctataatatcattcaaaacagcaatatggttctggatgacagaacaggataataaaccatcatgccacaacgttatcattggacaatggacgccatcccctaaagatacagcagctaatagagttccagggtacggtgtcattaccaacatcatgaacggtcaatttgaacgtgggatgggtccgaatactgcagcggaaagtcgaattggatctaacaggaggtattgtgccacgaagaatgttcctactggtgaaaatttggactgtaacaatcaaaagaagttcgcccagggaaaagcgtctttagttaaatatagagagtgaacgcaaattatgtttatgtattatgaagggaagtctataagttatatttggatgtaaacaataaggggattgtgtatgccc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0031D11-98q2S/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0031D11.1" temp_strand="+" temp_description="C02SLe0031D11.1  AC215451.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0031D11 sequenced_by:kribb upload_account_name:korea">
        <position start="93905" stop="95503"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="94205" g_stop="94482" g_length="278"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="278" r_length="278" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="94483" i_stop="94555" i_length="73">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="94556" g_stop="95203" g_length="648"/>
          <reference_exon_boundary r_type="cDNA" r_start="279" r_stop="926" r_length="648" r_score="0.966"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0031D11.1" gen_strand="+" ref_id="SGN-U578942" ref_strand="+">
        <total_alignment_score>0.976</total_alignment_score>
        <cumulative_length_of_scored_exons>926</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0031D11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U578942" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="94205" e_stop="94482"/>
          <exon e_start="94556" e_stop="95203"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTCAATATTGTATCACCCGTTGCACTGTCTTGTCTCTTTTTCTTGTTCCTAACAGGTACTTTAGCACAAAATGCCGGTTCCATTGTAACGCGGGAATTGTTCGAACAAATGCTGAGTTTTAGGAACAATGACGCATGTCCTGCCAAAGGATTCTACACTTATGATGCATTCATAGCTGCAGCCAATTCGTTTCCAGGTTTTGGTACTGCTGGTGATGATACTGCACGTAAGAAGGAAATTGCTGCCTTTTTCGGTCAAACATCTCACGAAACTAATGGTAATTTGGATCATCCTTCTTAGCATTGTAATTTATAGGTAACAATTGAATTATATCATTCGCTCTTTTGCAGGTGGTAGTGCAGGAACATTCACTGGAGGATATTGCTTTGTTAAGCAAATAGAGCAGTCAGACAGATACTATGGCAGAGGACCTATCCAATTGACACAGTAAGACAATTCAATAGAATATCAACATTTGGAATCATTAGTAATATTCTTTTTTATGCAGCCAATCTAACTACGAACGAGCTGGACAAGGTATTGGTGTTGGACAAGAGTTAGTGAACAACCCTGATTTAGTTGCGACAGATCCTATAATATCATTCAAAACAGCAATATGGTTCTGGATGACAGAACAGGATAATAAACCATCATGCCACAACGTTATCATTGGACAATGGACGCCATCCCCTAAAGATACAGCAGCTAATAGAGTTCCAGGGTACGGTGTCATTACCAACATCATTAACGGTCAATTTGAATGTGGGATGGGTCCGAATACTGCAGCGGAAAGTCGAATTGGATTTTACAGGAGGTATTGTGGTATGTTGAATGTTCCTACTGGTGAAAATTTGGACTGTAACAATCAAAAGAACTTCGCCCAGGGCTAAGCGTCTTTATTTATATATAGAGAGAGAATGCAAATTATGTTTATGTATTACGTTGTGAAGTCTATAAGTTATATTTGGATGTAATCAATAAGGGGATTCTGTATGCCC</genome_strand>
        <mrna_strand>GTTCAATATTGTATCACCCGTTGCACTGTCTTGTCTCTTTTTCTTGTTCCTAACAGGTACTTTAGCACAAAATGCCGGTTCCATTGTAACGCGGGAATTGTTCGAACAAATGCTGAGTTTTAGGAACAATGACGCATGTCCTGCCAAAGGATTCTACACTTATGATGCATTCATAGCTGCAGCCAATTCGTTTCCAGGTTTTGGTACTGCTGGTGATGATACTGCACGTAAGAAGGAAATTGCTGCCTTTTTCGGTCAAACATCTCACGAAACTAATG.........................................................................GTGGTAGTGCAGGAACATTCACTGGAGGATATTGCTTTGTTAAGCAAATAGAGCAGTCAGACAGATACTATGGCAGAGGACCTATCCAATTGACACAGTAAGACAATTCAATAGAATATCAACATTTGGAATCATTAGTAATATTCTTTTTTATGCAGCCAATCTAACTACGAACGAGCTGGACAAGGTATTGGTGTTGGACAAGAGTTAGTGAACAACCCTGATTTAGTTGCGACAGATCCTATAATATCATTCAAAACAGCAATATGGTTCTGGATGACAGAACAGGATAATAAACCATCATGCCACAACGTTATCATTGGACAATGGACGCCATCCCCTAAAGATACAGCAGCTAATAGAGTTCCAGGGTACGGTGTCATTACCAACATCATGAACGGTCAATTTGAACGTGGGATGGGTCCGAATACTGCAGCGGAAAGTCGAATTGGATCTAACAGGAGGTATTGTGCCACGAAGAATGTTCCTACTGGTGAAAATTTGGACTGTAACAATCAAAAGAAGTTCGCCCAGGGAAAAGCGTCTTTAGTTAAATATAGAGAGTGAACGCAAATTATGTTTATGTATTATGAAGGGAAGTCTATAAGTTATATTTGGATGTAAACAATAAGGGGATTGTGTATGCCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0031D11-98q2S/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U592828" ref_strand="+" ref_description="SGN-U592828 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|544010|sp|Q05540|CHIB_SOLLC (e_value=4e-20) RecName:; (*SWP) sp|Q05540|CHIB_SOLLC (e_value=2e-21) Acidic 27 kDa endochitinase OS=Solanum lycopersicum GN=CHI17; ">
      <seq>ggggaaacactatctaatgcataagaaagaacagagagaagcaaaaaagaaatggaggttttgagatcacaaatggtattacgttgtgtctttttgttgttcccaacgggaagctttgcacaagatgttggtacaattgtgacaagtgacttgttcaacgagatgctgaagaatcgaaacgatgatagatgtcctgccaagggcttctacacttatgatgcaagcaattggacaggacttagttaacaaccctgacntagtagctacagatgcaactgtatcttttaaaacagcaatatngnnnctggatgancgcacaaggcantaanccatcatgccncgatgttatcacagggcantggacgccatcngccgcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0031D11-98q2S/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0031D11.1" temp_strand="+" temp_description="C02SLe0031D11.1  AC215451.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0031D11 sequenced_by:kribb upload_account_name:korea">
        <position start="97213" stop="98790"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="97511" g_stop="97727" g_length="217"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="217" r_length="217" r_score="0.972"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="97728" i_stop="98329" i_length="602">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="98330" g_stop="98490" g_length="161"/>
          <reference_exon_boundary r_type="cDNA" r_start="218" r_stop="377" r_length="160" r_score="0.901"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0031D11.1" gen_strand="+" ref_id="SGN-U592828" ref_strand="+">
        <total_alignment_score>0.942</total_alignment_score>
        <cumulative_length_of_scored_exons>378</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0031D11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U592828" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="97511" e_stop="97727"/>
          <exon e_start="98330" e_stop="98490"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGTAAACACTATCTAATGCATAAGAAAGAACAGAGAGAAGCAAAAAAGAAATGGAGTTTTTGAGATCACAAATGGTATTATGTTGTGTCTTTTTGTTGTTCCTAACGGGAAGCTTTGCACAAGATGTTGGTACAATTGTGACAAGTGACTTGTTCAACGAGATGCTGAAGAATCGAAACGATGATAGATGTCCTGCCAAGGGCTTCTACACTTATGATGCATTCATAGCTGCAGCCAATTCATTTCCAGGTTTTGGTACTACCGGTGATGATACTGCGCGTAAGAAGGAAATTGCTGCCTTTTTCGGTCAAACTTCTCATGAAACTACTGGTAATTTTGGCTCTTACACCAAACTACTGTTATTTGTTCAACATGTAAGTACACAAAATTGGACTGACCGTATCCAGGATTTTGAGGTTCTAGATGCTCTACCGTTTGAACAGTAGCTTGGTTTCAATGTTAGCATAATTGTACATAGATCTGCCCCTGATTGTAACACAAAGTGTCTAGTTATCAAACGTTTTTAAGAAATGGACTTACGTTATATACACTACAATAAGTGAAGTATTTGGTTCTAATTTTGCAGGTGGTAGCCTAAGTGCTGATGGTCCATTTGCCGGAGGATATTGTTTTGTTAGGGAAGGCAATCAAATGGGAAGTGGATTTTATGGCAGAGGACCTATCCAATTGACAGGGTATGTAAAACAGAGGAAAATAGTTCATTTCTAACTAGGAAATATTAGATGAAAAAAACTCCATTTTGTAACTAATTTATTGATGATAAAATGAATTTTGCAGGCAATCTAACTATGACTTAGCTGGGCAAGCAATTGGACAAGACTTAGTTAACAACCCTGACTTAGTAGCTACAGATGCAACTGTATCTTTTAAAACAGCAATAT-GGTTCTGGATGACCGCACAAGGCAATAAGCCATCATGCCACGATGTTATCACAGGGCAATGGACGCCATCAGCCGCC</genome_strand>
        <mrna_strand>GGGGAAACACTATCTAATGCATAAGAAAGAACAGAGAGAAGCAAAAAAGAAATGGAGGTTTTGAGATCACAAATGGTATTACGTTGTGTCTTTTTGTTGTTCCCAACGGGAAGCTTTGCACAAGATGTTGGTACAATTGTGACAAGTGACTTGTTCAACGAGATGCTGAAGAATCGAAACGATGATAGATGTCCTGCCAAGGGCTTCTACACTTATG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT--GCAAGCAATTGGACAGGACTTAGTTAACAACCCTGACNTAGTAGCTACAGATGCAACTGTATCTTTTAAAACAGCAATATNGNNNCTGGATGANCGCACAAGGCANTAANCCATCATGCCNCGATGTTATCACAGGGCANTGGACGCCATCNGCCGCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0031D11-98q2S/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U577871" ref_strand="+" ref_description="SGN-U577871 Tomato 200607#2 [41 ESTs aligned] (*GB) gi|544010|sp|Q05540|CHIB_SOLLC (e_value=2e-145) RecName:; (*ATH) AT3G12500.1 (e_value=3e-88) | Symbol: None | basic endochitinase, identical to basic endochitinase precursor SP:P19171 from (Arabidopsis thaliana) | chr3:3962389-3963971 REVERSE | Aliases: T2E22.18; (*SWP) sp|Q05540|CHIB_SOLLC (e_value=1e-146) Acidic 27 kDa endochitinase OS=Solanum lycopersicum GN=CHI17; ">
      <seq>gccggggaaacactatctaatgcataagaaagaacagagagaagcaaaaaagaaatggagtttttgagatcacaaatggtattatgttgtgtctttttgttgttcctaacgggaagctttgcacaagatgttggtacaattgtgacaagtgacttgttcaacgagatgctgaagaatcgaaacgatgatagatgtcctgccaagggcttctacacttatgatgcattcatagctgcagccaattcatttccaggttttggtactaccggtgatgatactgcgcgtaagaaggaaattgctgcctttttcggtcaaacttctcatgaaactactggtggtagcctaagtgctgatggtccatttgccggaggatattgttttgttagggaaggcaatcaaatgggaagtggattttatggcagaggacctatccaattgacagggcaatctaactatgacttagctgggcaagcaattggacaagacttagttaacaaccctgacttagtagctacagatgcaactgtatcttttaaaacagcaatatggttctggatgaccgcacaaggcaataagccatcatgccacgatgttatcacagggcaatggacgccatcagccgccgatgcatcagcaaatagacaaccaggctacggtgtcattacaaacataattaacggtggaattgaatgtggcaaaggacagaatccacaagtggaggatcggattggattctacagaaggtattgtacgatactgaatgttgctcccggggacaaccttgattgctacgaccagaggaactttgctgaggcctagctttgtgttttagtcatgatgatgtctgaatgaataagggattttggatgcccatttggaatatgtagtttcttattttgtctacacaaataagagtttcttttatcttataacataatataccacatgtactattatctcatcgatattttaatttcccctttgtttacgtagttcttgcatttacaatttgcactagtatatgagggaagcaattttaataattcaagtggctacagggagtgtatttagagggttaaaagtgtattctttctactgacttttagtagtagttgcacaaaaggcagtgaact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0031D11-98q2S/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0031D11.1" temp_strand="+" temp_description="C02SLe0031D11.1  AC215451.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0031D11 sequenced_by:kribb upload_account_name:korea">
        <position start="97213" stop="99299"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="97514" g_stop="97841" g_length="328"/>
          <reference_exon_boundary r_type="cDNA" r_start="7" r_stop="334" r_length="328" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="97842" i_stop="98097" i_length="256">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="98098" g_stop="98206" g_length="109"/>
          <reference_exon_boundary r_type="cDNA" r_start="335" r_stop="443" r_length="109" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="98207" i_stop="98309" i_length="103">
            <donor d_prob="0.950" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="98310" g_stop="98999" g_length="690"/>
          <reference_exon_boundary r_type="cDNA" r_start="444" r_stop="1133" r_length="690" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0031D11.1" gen_strand="+" ref_id="SGN-U577871" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>1127</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0031D11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U577871" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="97514" e_stop="97841"/>
          <exon e_start="98098" e_stop="98206"/>
          <exon e_start="98310" e_stop="98999"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAACACTATCTAATGCATAAGAAAGAACAGAGAGAAGCAAAAAAGAAATGGAGTTTTTGAGATCACAAATGGTATTATGTTGTGTCTTTTTGTTGTTCCTAACGGGAAGCTTTGCACAAGATGTTGGTACAATTGTGACAAGTGACTTGTTCAACGAGATGCTGAAGAATCGAAACGATGATAGATGTCCTGCCAAGGGCTTCTACACTTATGATGCATTCATAGCTGCAGCCAATTCATTTCCAGGTTTTGGTACTACCGGTGATGATACTGCGCGTAAGAAGGAAATTGCTGCCTTTTTCGGTCAAACTTCTCATGAAACTACTGGTAATTTTGGCTCTTACACCAAACTACTGTTATTTGTTCAACATGTAAGTACACAAAATTGGACTGACCGTATCCAGGATTTTGAGGTTCTAGATGCTCTACCGTTTGAACAGTAGCTTGGTTTCAATGTTAGCATAATTGTACATAGATCTGCCCCTGATTGTAACACAAAGTGTCTAGTTATCAAACGTTTTTAAGAAATGGACTTACGTTATATACACTACAATAAGTGAAGTATTTGGTTCTAATTTTGCAGGTGGTAGCCTAAGTGCTGATGGTCCATTTGCCGGAGGATATTGTTTTGTTAGGGAAGGCAATCAAATGGGAAGTGGATTTTATGGCAGAGGACCTATCCAATTGACAGGGTATGTAAAACAGAGGAAAATAGTTCATTTCTAACTAGGAAATATTAGATGAAAAAAACTCCATTTTGTAACTAATTTATTGATGATAAAATGAATTTTGCAGGCAATCTAACTATGACTTAGCTGGGCAAGCAATTGGACAAGACTTAGTTAACAACCCTGACTTAGTAGCTACAGATGCAACTGTATCTTTTAAAACAGCAATATGGTTCTGGATGACCGCACAAGGCAATAAGCCATCATGCCACGATGTTATCACAGGGCAATGGACGCCATCAGCCGCCGATGCATCAGCAAATAGACAACCAGGCTACGGTGTCATTACAAACATAATTAACGGTGGAATTGAATGTGGCAAAGGACAGAATCCACAAGTGGAGGATCGGATTGGATTCTACAGAAGGTATTGTACGATACTGAATGTTGCTCCCGGGGACAACCTTGATTGCTACGACCAGAGGAACTTTGCTGAGGCCTAGCTTTGTGTTTTAGTCATGATGATGTCTGAATGAATAAGGGATTTTGGATGCCCATTTGGAATATGTAGTTTCTTATTTTGTCTACACAAATAAGAGTTTCTTTTATCTTATAACATAATATACCACATGTACTATTATCTCATCGATATTTTAATTTCCCCTTTGTTTACGTAGTTCTTGCATTTACAATTTGCACTAGTATATGAGGGAAGCAATTTTAATAATTCAAGTGGCTACAGGGAGTGTATTTAGAGGGTTAAAAGTGTATTCTTTCTACTGACTTTTAGTAGTAGTTGCACAAAAGGCAGTGAACT</genome_strand>
        <mrna_strand>GAAACACTATCTAATGCATAAGAAAGAACAGAGAGAAGCAAAAAAGAAATGGAGTTTTTGAGATCACAAATGGTATTATGTTGTGTCTTTTTGTTGTTCCTAACGGGAAGCTTTGCACAAGATGTTGGTACAATTGTGACAAGTGACTTGTTCAACGAGATGCTGAAGAATCGAAACGATGATAGATGTCCTGCCAAGGGCTTCTACACTTATGATGCATTCATAGCTGCAGCCAATTCATTTCCAGGTTTTGGTACTACCGGTGATGATACTGCGCGTAAGAAGGAAATTGCTGCCTTTTTCGGTCAAACTTCTCATGAAACTACTG................................................................................................................................................................................................................................................................GTGGTAGCCTAAGTGCTGATGGTCCATTTGCCGGAGGATATTGTTTTGTTAGGGAAGGCAATCAAATGGGAAGTGGATTTTATGGCAGAGGACCTATCCAATTGACAGG.......................................................................................................GCAATCTAACTATGACTTAGCTGGGCAAGCAATTGGACAAGACTTAGTTAACAACCCTGACTTAGTAGCTACAGATGCAACTGTATCTTTTAAAACAGCAATATGGTTCTGGATGACCGCACAAGGCAATAAGCCATCATGCCACGATGTTATCACAGGGCAATGGACGCCATCAGCCGCCGATGCATCAGCAAATAGACAACCAGGCTACGGTGTCATTACAAACATAATTAACGGTGGAATTGAATGTGGCAAAGGACAGAATCCACAAGTGGAGGATCGGATTGGATTCTACAGAAGGTATTGTACGATACTGAATGTTGCTCCCGGGGACAACCTTGATTGCTACGACCAGAGGAACTTTGCTGAGGCCTAGCTTTGTGTTTTAGTCATGATGATGTCTGAATGAATAAGGGATTTTGGATGCCCATTTGGAATATGTAGTTTCTTATTTTGTCTACACAAATAAGAGTTTCTTTTATCTTATAACATAATATACCACATGTACTATTATCTCATCGATATTTTAATTTCCCCTTTGTTTACGTAGTTCTTGCATTTACAATTTGCACTAGTATATGAGGGAAGCAATTTTAATAATTCAAGTGGCTACAGGGAGTGTATTTAGAGGGTTAAAAGTGTATTCTTTCTACTGACTTTTAGTAGTAGTTGCACAAAAGGCAGTGAACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0031D11-98q2S/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U593805" ref_strand="+" ref_description="SGN-U593805 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|544010|sp|Q05540|CHIB_SOLLC (e_value=2e-37) RecName:; (*ATH) AT3G12500.1 (e_value=5e-22) | Symbol: None | basic endochitinase, identical to basic endochitinase precursor SP:P19171 from (Arabidopsis thaliana) | chr3:3962389-3963971 REVERSE | Aliases: T2E22.18; (*SWP) sp|Q05540|CHIB_SOLLC (e_value=2e-38) Acidic 27 kDa endochitinase OS=Solanum lycopersicum GN=CHI17; ">
      <seq>agaacagagagacgctaaaaagaaatggagtttttgagatcacaaatggtattatgttgtgtctttttgttgttcctaacgggaagctttgcacaagatgttggtacaattgtgacaagtgacttgttcaacgagatgctgaagaatcgaaacgatgatagatgtcctgccaagggcttctacacttatgatgcattcatagctgcagccaattcatttccaggttttggtactaccggtgatgatactgcgcgtaagaaggaaattgccgccgatgcatcagcaaatagacaaccaggctacggtgtcattacaaacataattaacggtggaattgaatgtggcaaaggacagaatccacaagtggaggatcggattggattctacagaaggtattgtacgatactgaatgttgctcccggggacaaccttgattgctacgaccagaggaactttgctgaggcctagctttgtgttttagtcatgatgatgtctgaatgaataagggattttggatgcccatttggaatatgtagtttcttattttgtctacacaaataagagtttcttttatcttataacataatataccacatgtactatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0031D11-98q2S/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0031D11.1" temp_strand="+" temp_description="C02SLe0031D11.1  AC215451.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0031D11 sequenced_by:kribb upload_account_name:korea">
        <position start="97238" stop="99121"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="97538" g_stop="97805" g_length="268"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="268" r_length="268" r_score="0.993"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="97806" i_stop="98485" i_length="680">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="98486" g_stop="98821" g_length="336"/>
          <reference_exon_boundary r_type="cDNA" r_start="269" r_stop="604" r_length="336" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0031D11.1" gen_strand="+" ref_id="SGN-U593805" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>604</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0031D11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U593805" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="97538" e_stop="97805"/>
          <exon e_start="98486" e_stop="98821"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAACAGAGAGAAGCAAAAAAGAAATGGAGTTTTTGAGATCACAAATGGTATTATGTTGTGTCTTTTTGTTGTTCCTAACGGGAAGCTTTGCACAAGATGTTGGTACAATTGTGACAAGTGACTTGTTCAACGAGATGCTGAAGAATCGAAACGATGATAGATGTCCTGCCAAGGGCTTCTACACTTATGATGCATTCATAGCTGCAGCCAATTCATTTCCAGGTTTTGGTACTACCGGTGATGATACTGCGCGTAAGAAGGAAATTGCTGCCTTTTTCGGTCAAACTTCTCATGAAACTACTGGTAATTTTGGCTCTTACACCAAACTACTGTTATTTGTTCAACATGTAAGTACACAAAATTGGACTGACCGTATCCAGGATTTTGAGGTTCTAGATGCTCTACCGTTTGAACAGTAGCTTGGTTTCAATGTTAGCATAATTGTACATAGATCTGCCCCTGATTGTAACACAAAGTGTCTAGTTATCAAACGTTTTTAAGAAATGGACTTACGTTATATACACTACAATAAGTGAAGTATTTGGTTCTAATTTTGCAGGTGGTAGCCTAAGTGCTGATGGTCCATTTGCCGGAGGATATTGTTTTGTTAGGGAAGGCAATCAAATGGGAAGTGGATTTTATGGCAGAGGACCTATCCAATTGACAGGGTATGTAAAACAGAGGAAAATAGTTCATTTCTAACTAGGAAATATTAGATGAAAAAAACTCCATTTTGTAACTAATTTATTGATGATAAAATGAATTTTGCAGGCAATCTAACTATGACTTAGCTGGGCAAGCAATTGGACAAGACTTAGTTAACAACCCTGACTTAGTAGCTACAGATGCAACTGTATCTTTTAAAACAGCAATATGGTTCTGGATGACCGCACAAGGCAATAAGCCATCATGCCACGATGTTATCACAGGGCAATGGACGCCATCAGCCGCCGATGCATCAGCAAATAGACAACCAGGCTACGGTGTCATTACAAACATAATTAACGGTGGAATTGAATGTGGCAAAGGACAGAATCCACAAGTGGAGGATCGGATTGGATTCTACAGAAGGTATTGTACGATACTGAATGTTGCTCCCGGGGACAACCTTGATTGCTACGACCAGAGGAACTTTGCTGAGGCCTAGCTTTGTGTTTTAGTCATGATGATGTCTGAATGAATAAGGGATTTTGGATGCCCATTTGGAATATGTAGTTTCTTATTTTGTCTACACAAATAAGAGTTTCTTTTATCTTATAACATAATATACCACATGTACTATT</genome_strand>
        <mrna_strand>AGAACAGAGAGACGCTAAAAAGAAATGGAGTTTTTGAGATCACAAATGGTATTATGTTGTGTCTTTTTGTTGTTCCTAACGGGAAGCTTTGCACAAGATGTTGGTACAATTGTGACAAGTGACTTGTTCAACGAGATGCTGAAGAATCGAAACGATGATAGATGTCCTGCCAAGGGCTTCTACACTTATGATGCATTCATAGCTGCAGCCAATTCATTTCCAGGTTTTGGTACTACCGGTGATGATACTGCGCGTAAGAAGGAAATTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCCGATGCATCAGCAAATAGACAACCAGGCTACGGTGTCATTACAAACATAATTAACGGTGGAATTGAATGTGGCAAAGGACAGAATCCACAAGTGGAGGATCGGATTGGATTCTACAGAAGGTATTGTACGATACTGAATGTTGCTCCCGGGGACAACCTTGATTGCTACGACCAGAGGAACTTTGCTGAGGCCTAGCTTTGTGTTTTAGTCATGATGATGTCTGAATGAATAAGGGATTTTGGATGCCCATTTGGAATATGTAGTTTCTTATTTTGTCTACACAAATAAGAGTTTCTTTTATCTTATAACATAATATACCACATGTACTATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0031D11-98q2S/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U589391" ref_strand="+" ref_description="SGN-U589391 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|218694563|ref|YP_002402230.1| (e_value=1e-106) transposase,; ">
      <seq>atcctgcacagcgctaatacatcgcctcatagtttccccaatatctacccatgtgtgaatatattttgagtaagcagggttgcagccacgaatgagtcttcccttgttattgtgtagccagaatgccgcaaaacttccatgcctaatccaactgttgagagtacgtttcaatttctgactgtgttagcctggaaatgcttgtcccagccttgtttctgaccgtgaacgcgccgccagccaacatgttagttgaagacatgcagggcgattagcaacatgatatcaaaacgctctgagctgctcgttcggctatggcgtaagcctagtccgtatgcaggacttttcaagtctcggaaggtttcttcaatctgcattcgcttccaatagatattaacaagttgtttgggtgttcgaatttcaacaggtaagttaattgctagaatccatggctcctttgccaacgctgagtagattttaggtgacgggtggtgacaatgagtccgtgtcgagcgctgattttttcggcctttacagcgagatttatacaataaaatttggcatgagattggattgcttttagtcagcctcttatagcctaaagtctttgagtgactaaatgacatatcatgtaagttgctgataggtttccagttttccgctcctaggtctgcatattgtacttttcctcctactcgactt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0031D11-98q2S/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0031D11.1" temp_strand="+" temp_description="C02SLe0031D11.1  AC215451.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0031D11 sequenced_by:kribb upload_account_name:korea">
        <position start="105397" stop="106687"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="105692" g_stop="106387" g_length="696"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="699" r_length="699" r_score="0.934"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0031D11.1" gen_strand="+" ref_id="SGN-U589391" ref_strand="+">
        <total_alignment_score>0.934</total_alignment_score>
        <cumulative_length_of_scored_exons>696</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0031D11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U589391" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="105692" e_stop="106387"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAACGCATAGTGCTGAGAGATCCCCTCATAATTTCCCCAAAGCGTAACCATGTGTGAATAAATTTTGAGCTAGTAGGGTTGCAGCCACGAGTAAGTCTTCCCTTGTTATTGTGTAGCCAGAATGCCGCAAAACTTCCATGCCTAAGCGAACTGTTGAGAGTACGTTTCGATTTCTGACTGTGTTAGCCTGGAAGTGCTTGTCCCAACCTTGTTTCTGAGCATGAACGC-CCGCAAGCCAACATGTTAGTTGAAG-CAT-CAGGGCGATTAGCAGCATGATATCAAAACGCTCTGAGCTGCTCGTTCGGCTATGGCGTAGGCCTAGTCCGTAGGCAGGACTTTTCAAGTCTCGGAAGGTTTCTTCAATCTGCATTCGCTTCGAATAGATATTAACAAGTTGTTTGGGTGTTCGAATTTCAACAGGTAAGTTAGTTGCTAGAATCCATGGCTCCTTTGCCGACGCTGAGTAGATTTTAGGTGACGGGTGGTGACAATGAGTCCGTGTCGAGCGCTGATTTTTTCGGCCTTTAGAGCGAGATTTATACAATAGAATTTGGCATGAGATTGGATTGCTTTTAGTCAGCCTCTTATAGCCTAAAGTCTTTGAGTGACTAGATGACATATCATGTAAGTTGCTGATAGGTTTCCAGTTTTCCGCTCCTAGGTCTGCATATTGTACTTTTCCTCTTACTCGACTT</genome_strand>
        <mrna_strand>ATCCTGCACAGCGCTAATACATCGCCTCATAGTTTCCCCAATATCTACCCATGTGTGAATATATTTTGAGTAAGCAGGGTTGCAGCCACGAATGAGTCTTCCCTTGTTATTGTGTAGCCAGAATGCCGCAAAACTTCCATGCCTAATCCAACTGTTGAGAGTACGTTTCAATTTCTGACTGTGTTAGCCTGGAAATGCTTGTCCCAGCCTTGTTTCTGACCGTGAACGCGCCGCCAGCCAACATGTTAGTTGAAGACATGCAGGGCGATTAGCAACATGATATCAAAACGCTCTGAGCTGCTCGTTCGGCTATGGCGTAAGCCTAGTCCGTATGCAGGACTTTTCAAGTCTCGGAAGGTTTCTTCAATCTGCATTCGCTTCCAATAGATATTAACAAGTTGTTTGGGTGTTCGAATTTCAACAGGTAAGTTAATTGCTAGAATCCATGGCTCCTTTGCCAACGCTGAGTAGATTTTAGGTGACGGGTGGTGACAATGAGTCCGTGTCGAGCGCTGATTTTTTCGGCCTTTACAGCGAGATTTATACAATAAAATTTGGCATGAGATTGGATTGCTTTTAGTCAGCCTCTTATAGCCTAAAGTCTTTGAGTGACTAAATGACATATCATGTAAGTTGCTGATAGGTTTCCAGTTTTCCGCTCCTAGGTCTGCATATTGTACTTTTCCTCCTACTCGACTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0031D11-98q2S/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U589393" ref_strand="+" ref_description="SGN-U589393 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|151940600|gb|EDN59046.1| (e_value=9e-71) hypothetical; ">
      <seq>ggttaccactggaagcgcttgacccaaccttgttgtatgcatcatgaacgccctcttgctcatcatgttagttgaagcatcacggcgagttaggcatcgatgatatcaaaacgctctgagctgctcgttcagttaatggcgtatgccatagtccgtaggcaggacttttgaagatctcggaaggtttcttcaatctgcattcgcctctgaatagatattaacaagttgtttgggtgttcgaatttcaacaggtaagttagttgctagaacccatggctcctttgccgacgctgagtagattttaggtgacgggtggtgacaatgagtccgtgtcgagcgctgattttttcggcctttagagcgagatttatacaatagaatttggcatgagattggattgcttttagtcagcctcttatagcctaaagtctttgagtgactagatgacatatcatgtaagttgctgataggtttccagttttccgctcctaggtctgcatattgtacttttcctcttactcgacttaaccagtaccaacccagcttctcaacgggattataccatggcactttaaagccagcatcactga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0031D11-98q2S/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0031D11.1" temp_strand="+" temp_description="C02SLe0031D11.1  AC215451.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0031D11 sequenced_by:kribb upload_account_name:korea">
        <position start="105574" stop="106751"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="105879" g_stop="106451" g_length="573"/>
          <reference_exon_boundary r_type="cDNA" r_start="8" r_stop="590" r_length="583" r_score="0.932"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0031D11.1" gen_strand="+" ref_id="SGN-U589393" ref_strand="+">
        <total_alignment_score>0.932</total_alignment_score>
        <cumulative_length_of_scored_exons>573</cumulative_length_of_scored_exons>
        <coverage percentage="0.971" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0031D11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U589393" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="105879" e_stop="106451"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTGGAAGTGCTTGTCCCAACCTTGTT-TCTG-AGCATGAACGCCCGCAAGC-CAACATGTTAGTTGAAGCATCAGGGCGA-TTA-GCAGC-ATGATATCAAAACGCTCTGAGCTGCTCGTTCGGCT-ATGGCGTAGGCC-TAGTCCGTAGGCAGGACTTTTCAAG-TCTCGGAAGGTTTCTTCAATCTGCATTCGCTTC-GAATAGATATTAACAAGTTGTTTGGGTGTTCGAATTTCAACAGGTAAGTTAGTTGCTAGAATCCATGGCTCCTTTGCCGACGCTGAGTAGATTTTAGGTGACGGGTGGTGACAATGAGTCCGTGTCGAGCGCTGATTTTTTCGGCCTTTAGAGCGAGATTTATACAATAGAATTTGGCATGAGATTGGATTGCTTTTAGTCAGCCTCTTATAGCCTAAAGTCTTTGAGTGACTAGATGACATATCATGTAAGTTGCTGATAGGTTTCCAGTTTTCCGCTCCTAGGTCTGCATATTGTACTTTTCCTCTTACTCGACTTAACCAGTACCAACCCAGCTTCTCAACGGATTTATACCATGGCACTTTAAAGCCAGCATCACTGA</genome_strand>
        <mrna_strand>ACTGGAAGCGCTTGACCCAACCTTGTTGTATGCATCATGAACGCCCTCTTGCTCATCATGTTAGTTGAAGCATCACGGCGAGTTAGGCATCGATGATATCAAAACGCTCTGAGCTGCTCGTTCAGTTAATGGCGTATGCCATAGTCCGTAGGCAGGACTTTTGAAGATCTCGGAAGGTTTCTTCAATCTGCATTCGCCTCTGAATAGATATTAACAAGTTGTTTGGGTGTTCGAATTTCAACAGGTAAGTTAGTTGCTAGAACCCATGGCTCCTTTGCCGACGCTGAGTAGATTTTAGGTGACGGGTGGTGACAATGAGTCCGTGTCGAGCGCTGATTTTTTCGGCCTTTAGAGCGAGATTTATACAATAGAATTTGGCATGAGATTGGATTGCTTTTAGTCAGCCTCTTATAGCCTAAAGTCTTTGAGTGACTAGATGACATATCATGTAAGTTGCTGATAGGTTTCCAGTTTTCCGCTCCTAGGTCTGCATATTGTACTTTTCCTCTTACTCGACTTAACCAGTACCAACCCAGCTTCTCAACGGGATTATACCATGGCACTTTAAAGCCAGCATCACTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0031D11-98q2S/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U604818" ref_strand="+" ref_description="SGN-U604818 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|116267070|gb|ABJ96340.1| (e_value=3e-56) transposase; ">
      <seq>ataatcagacaacacttgtgcaaaatcgatcttttaacctaatctacttttacccttctgccccgatttacacttatcaacgactcaacttcttaacgatggcttgccacgccttacttgactgaataactctcactcttaactaacttggacgtaacctgccaaccatatctatatctaaacataacatcttactaatctaccgattgttacgtaatcgtctcctccacaaagagcgactcgctgtataccgttggcatgctagctttatctgttcgggcaatacgatgcccattgtacttgttgactggtctgatatccgtgagcaaaaacggcttatggtattgcgagcttcagtcgcactacacggtcgttctgttactctttatgagaaagcgttcccgctttcagagcaatgttcaaagaaagctcatgaccaatttctagccgaccttgcgagcattctaccgagtaacaccacaccgctcattgtcagtgatgctggctttaaaagtgccatggtataaatccc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0031D11-98q2S/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0031D11.1" temp_strand="-" temp_description="C02SLe0031D11.1  AC215451.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0031D11 sequenced_by:kribb upload_account_name:korea">
        <position start="107165" stop="106114"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="106942" g_stop="106413" g_length="530"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="532" r_length="532" r_score="0.919"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0031D11.1" gen_strand="-" ref_id="SGN-U604818" ref_strand="+">
        <total_alignment_score>0.919</total_alignment_score>
        <cumulative_length_of_scored_exons>530</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0031D11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U604818" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="106942" e_stop="106413"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATAATCAGACAACAAAATGTGCGAACTCGATATTTTACACGACTCT-CTTTACCAATTCTGCCCCGAATTACACTTA-AAACGACTCAACAGCTTAACGTTGGCTTGCCACGCCTTACTTGACTGTAAAACTCTCACTCTTACCGAACTTGGCCGTAACCTGCCAACCAAAGCGAGAACAAAACATAACATCAAACGAATCGACCGATTGTTAGGTAATCGTCACCTCCACAAAGAGCGACTCGCTGTATACCGTTGGCATGCTAGCTTTATCTGTTCGGGCAATACGATGCCCATTGTACTTGTTGACTGGTCTGATATCCGTGAGCAAAAACGGCTTATGGTATTGCGAGCTTCAGTCGCACTACACGGTCGTTCTGTTACTCTTTATGAGAAAGCGTTCCCGCTTTCAGAGCAATGTTCAAAGAAAGCTCATGACCAATTTCTAGCCGACCTTGCGAGCATTCTACCGAGTAACACCACACCGCTCATTGTCAGTGATGCTGGCTTT-AAAGTGCCATGGTATAAATCCG</genome_strand>
        <mrna_strand>ATAATCAGACAAC-ACTTGTGCAAAATCGATCTTTTAACCTAATCTACTTTTACCCTTCTGCCCCGATTTACACTTATCAACGACTCAACTTCTTAACGATGGCTTGCCACGCCTTACTTGACTGAATAACTCTCACTCTTAACTAACTTGGACGTAACCTGCCAACCATATCTATATCTAAACATAACATCTTACTAATCTACCGATTGTTACGTAATCGTCTCCTCCACAAAGAGCGACTCGCTGTATACCGTTGGCATGCTAGCTTTATCTGTTCGGGCAATACGATGCCCATTGTACTTGTTGACTGGTCTGATATCCGTGAGCAAAAACGGCTTATGGTATTGCGAGCTTCAGTCGCACTACACGGTCGTTCTGTTACTCTTTATGAGAAAGCGTTCCCGCTTTCAGAGCAATGTTCAAAGAAAGCTCATGACCAATTTCTAGCCGACCTTGCGAGCATTCTACCGAGTAACACCACACCGCTCATTGTCAGTGATGCTGGCTTTAAAAGTGCCATGGTATAAATCCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0031D11-98q2S/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U604614" ref_strand="+" ref_description="SGN-U604614 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|113205155|gb|ABI34274.1| (e_value=3e-45) IS10; ">
      <seq>aatcgtaagattaaggtaaatgacatacttgtcagatgatccaatggatacaccacaaatctataatcagacaacaaatatgtgcgaactcgatattttacacgactctcgttaccgattctgccccgaattacacttaagacgactcaacagcttaacgttggcttgccacgccttacttgactgtaaaactctcactcttaccgaacttggccgtaacctgccaaccaaagcgagaacaaaacataacatcaaacgaatcgaccgattgttaggtaatcgtcacctccacaaagagcgactcgctgtataccgttggcatgctagctttaactgttccggcacaaagacgcccactgtacat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0031D11-98q2S/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0031D11.1" temp_strand="-" temp_description="C02SLe0031D11.1  AC215451.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0031D11 sequenced_by:kribb upload_account_name:korea">
        <position start="107281" stop="106342"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="107004" g_stop="106642" g_length="363"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="364" r_length="364" r_score="0.920"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0031D11.1" gen_strand="-" ref_id="SGN-U604614" ref_strand="+">
        <total_alignment_score>0.920</total_alignment_score>
        <cumulative_length_of_scored_exons>363</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0031D11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U604614" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="107004" e_stop="106642"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATCATTAAGTTAAGGTAGAT-ACACATCTTGTCATATGATCAAATGGTTTCGCCAAAAATCAATAATCAGACAACAAA-ATGTGCGAACTCGATATTTTACACGACTCTCTTTACCAATTCTGCCCCGAATTACACTTAAAACGACTCAACAGCTTAACGTTGGCTTGCCACGCCTTACTTGACTGTAAAACTCTCACTCTTACCGAACTTGGCCGTAACCTGCCAACCAAAGCGAGAACAAAACATAACATCAAACGAATCGACCGATTGTTAGGTAATCGTCACCTCCACAAAGAGCGACTCGCTGTATACCGTTGGCATGCTAGCTTTATCTGTTCGGGCAATACGATGCCCATTGTACTT</genome_strand>
        <mrna_strand>AATCGTAAGATTAAGGTAAATGACATA-CTTGTCAGATGATCCAATGGATACACCACAAATCTATAATCAGACAACAAATATGTGCGAACTCGATATTTTACACGACTCTCGTTACCGATTCTGCCCCGAATTACACTTAAGACGACTCAACAGCTTAACGTTGGCTTGCCACGCCTTACTTGACTGTAAAACTCTCACTCTTACCGAACTTGGCCGTAACCTGCCAACCAAAGCGAGAACAAAACATAACATCAAACGAATCGACCGATTGTTAGGTAATCGTCACCTCCACAAAGAGCGACTCGCTGTATACCGTTGGCATGCTAGCTTTAACTGTTCCGGCACAAAGACGCCCACTGTACAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0031D11-98q2S/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U600659" ref_strand="+" ref_description="SGN-U600659 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|209947532|ref|YP_002291029.1| (e_value=1e-21) hypothetical; ">
      <seq>ctgatgaatcccctaatgatttttatcaaaatcattaaattaaggtatatacacatcttgtcatatgatcacatggtttcgccaaaaatcaataatcatacaaccaaatgtgctaactccatattttacacgactctctttaccaattctgccccctattacacttaaatcgactcaacagcttatcgttggcttgccacgccttacttgactgtaaaactct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0031D11-98q2S/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0031D11.1" temp_strand="-" temp_description="C02SLe0031D11.1  AC215451.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0031D11 sequenced_by:kribb upload_account_name:korea">
        <position start="107333" stop="106511"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="107033" g_stop="106811" g_length="223"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="223" r_length="223" r_score="0.951"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0031D11.1" gen_strand="-" ref_id="SGN-U600659" ref_strand="+">
        <total_alignment_score>0.951</total_alignment_score>
        <cumulative_length_of_scored_exons>223</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0031D11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U600659" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="107033" e_stop="106811"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGATGAATCCCCTAATGATTTTTATCAAAATCATTAAGTTAAGGTAGATACACATCTTGTCATATGATCAAATGGTTTCGCCAAAAATCAATAATCAGACAACAAAATGTGCGAACTCGATATTTTACACGACTCTCTTTACCAATTCTGCCCCGAATTACACTTAAAACGACTCAACAGCTTAACGTTGGCTTGCCACGCCTTACTTGACTGTAAAACTCT</genome_strand>
        <mrna_strand>CTGATGAATCCCCTAATGATTTTTATCAAAATCATTAAATTAAGGTATATACACATCTTGTCATATGATCACATGGTTTCGCCAAAAATCAATAATCATACAACCAAATGTGCTAACTCCATATTTTACACGACTCTCTTTACCAATTCTGCCCCCTATTACACTTAAATCGACTCAACAGCTTATCGTTGGCTTGCCACGCCTTACTTGACTGTAAAACTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0031D11-98q2S/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U584901" ref_strand="+" ref_description="SGN-U584901 Tomato 200607#2 [2 ESTs aligned] (*GB) gi|3790355|dbj|BAA33971.1| (e_value=2e-101) chitinase 134 [Nicotiana tabacum]; (*ATH) AT3G12500.1 (e_value=2e-83) | Symbol: None | basic endochitinase, identical to basic endochitinase precursor SP:P19171 from (Arabidopsis thaliana) | chr3:3962389-3963971 REVERSE | Aliases: T2E22.18; (*SWP) sp|Q05537|CHID_SOLLC (e_value=4e-93) Basic endochitinase (Fragment) OS=Solanum lycopersicum GN=CHI14; ">
      <seq>aacttggtaaaaactaaatgaagaacaaaattatgttttggggttttgttttgttttgtgtgttggctacaagaggaggattgacacaagatgttggtgctcttattagtaaagacatatttgagagaatgctattgcatcgtaatgatgccaattgtaatgccaaaggattttacacttatgatgcttttataacagctgcaaggtcctttgctgcttttggaactactggaaacaccaacactcgtaagaaggaaatcgctgcatttttggcacaaacttctcttgaaacaaccggggggtggggaacagctccggatggtccattttcatggggatattgcttcaagcaagaacaaggtagcccaccagattactgtgttacaaatcaacagtggccttgtgctcctggtaaaaaatactttggtcgaggtcccatccaaatatcctacaactacaactatggaccagcaggaagagccataggagttgatttgttaaacaatccagatgctgttgcaaatgatgcagtcgtttcattcaagacagccttgtggttctggatgacggcccagagaccaaagccatcggcccattttgttattactggtaaatggagaccaacaggagctgatttgtctgctggtcgtgtctctggctatggtttaatcacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0031D11-98q2S/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0031D11.1" temp_strand="+" temp_description="C02SLe0031D11.1  AC215451.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0031D11 sequenced_by:kribb upload_account_name:korea">
        <position start="108655" stop="110678"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108955" g_stop="109251" g_length="297"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="297" r_length="297" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="109252" i_stop="109925" i_length="674">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="109926" g_stop="110079" g_length="154"/>
          <reference_exon_boundary r_type="cDNA" r_start="298" r_stop="451" r_length="154" r_score="0.994"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="110080" i_stop="110155" i_length="76">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.920" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="110156" g_stop="110378" g_length="223"/>
          <reference_exon_boundary r_type="cDNA" r_start="452" r_stop="674" r_length="223" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0031D11.1" gen_strand="+" ref_id="SGN-U584901" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>674</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0031D11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U584901" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108955" e_stop="109251"/>
          <exon e_start="109926" e_stop="110079"/>
          <exon e_start="110156" e_stop="110378"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACTTGGTAAAAACTAAATGAAGAACAAAATTATGTTTTGGGGTTTTGTTTTGTTTTGTGTGTTGTCTACAAGAGGAGGATTGACACAAGATGTTGGTGCTCTTATTAGTAAAGACATATTTGAGAGAATGCTATTGCATCGTAATGATGCCAATTGTAATGCCAAAGGATTTTACACTTATGATGCTTTTATAACAGCTGCAAGGTCCTTTGCTGCTTTTGGAACTACTGGAAACACCAACACTCGTAAGAAGGAAATCGCTGCATTTTTGGCACAAACTTCTCTTGAAACAACCGGTACTATTTTCTTAAGTAATTATCCCTAGCTTGTTACAAGAACAAATAAAAGTCATTTTTACACTTTCTTTTGAGATCTTATTGACAACTTTTTAAGCAACCTAACATCCACAACCATGTACACAGGGGTGTCAAATGAGCGGCTTGGGTTGAAATTAGAAATATTTAAATGAGTTCAATAGAAACCGGGTTGAGTCTTGATCCACCCAAATTTATTTGAGCTCAAATGGGCTAAAAAACGGGTTGGGTCTTGACTCGTCCAATTTGACCCGATTAATCTCAATAATTTAACATATTGATATTTAACTTTTATAATCACAATTTTTGAATTTCCGCTCAAGAATTTTTTGTTAAAAAAGTAACAAATTGATAGACAAATCCATTCATATCTTCAATATAGGAACATATCTTAATAAAAAAATTTAAAACGAGTTGAAATTAGAAATTGAGTTGGACTCAATTGAGATATCTTTTCAAATAGGTTAAGCTTGAATAAGTTGATAATCAATCCAATTCAAATTATTTTAACCCAACCATTAAAATTCTGAGCGAGTTAGCTTCACTTTTGACACCCCTAAATTTCTCATGATAAAATTAACGTTATTTCCGAGTATGAAATCAATTGTTAGTAATGTAATACGAGATATAAAAGTATGAATTATGTTGATGATTAGGGGGGTGGGGAACAGCTCCGGATGGTCCATTTTCATGGGGATATTGCTTCAAGCAAGAACAAGGTAGCCCACCAGATTACTGTGTTGCAAATCAACAGTGGCCTTGTGCTCCTGGTAAAAAATACTTTGGTCGAGGTCCCATCCAAATATCCTAGTAAGTTTTGTTTTAATTTTTTCTACTTTCCACACATAATAGTAGGGTCTAAACTCATGAATTTAGTGATATGCAGCAACTACAACTATGGACCAGCAGGAAGAGCCATAGGAGTTGATTTGTTAAACAATCCAGATGCTGTTGCAAATGATGCAGTCGTTTCATTCAAGACAGCCTTGTGGTTCTGGATGACGGCCCAGAGACCAAAGCCATCGGCCCATTTTGTTATTACTGGTAAATGGAGACCAACAGGAGCTGATTTGTCTGCTGGTCGTGTCTCTGGCTATGGTTTAATCACC</genome_strand>
        <mrna_strand>AACTTGGTAAAAACTAAATGAAGAACAAAATTATGTTTTGGGGTTTTGTTTTGTTTTGTGTGTTGGCTACAAGAGGAGGATTGACACAAGATGTTGGTGCTCTTATTAGTAAAGACATATTTGAGAGAATGCTATTGCATCGTAATGATGCCAATTGTAATGCCAAAGGATTTTACACTTATGATGCTTTTATAACAGCTGCAAGGTCCTTTGCTGCTTTTGGAACTACTGGAAACACCAACACTCGTAAGAAGGAAATCGCTGCATTTTTGGCACAAACTTCTCTTGAAACAACCG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGGGTGGGGAACAGCTCCGGATGGTCCATTTTCATGGGGATATTGCTTCAAGCAAGAACAAGGTAGCCCACCAGATTACTGTGTTACAAATCAACAGTGGCCTTGTGCTCCTGGTAAAAAATACTTTGGTCGAGGTCCCATCCAAATATCCTA............................................................................CAACTACAACTATGGACCAGCAGGAAGAGCCATAGGAGTTGATTTGTTAAACAATCCAGATGCTGTTGCAAATGATGCAGTCGTTTCATTCAAGACAGCCTTGTGGTTCTGGATGACGGCCCAGAGACCAAAGCCATCGGCCCATTTTGTTATTACTGGTAAATGGAGACCAACAGGAGCTGATTTGTCTGCTGGTCGTGTCTCTGGCTATGGTTTAATCACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0031D11-98q2S/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U576039" ref_strand="+" ref_description="SGN-U576039 Tomato 200607#2 [3 ESTs aligned] (*GB) gi|21495|emb|CAA47921.1| (e_value=6e-12) chitinase; endochitinase [Solanum tuberosum]; (*SWP) sp|Q05537|CHID_SOLLC (e_value=3e-11) Basic endochitinase (Fragment) OS=Solanum lycopersicum GN=CHI14; ">
      <seq>gcacgaggttaatcaccaacataattaatggaggaatagaatgtggaaaaggttctaatccaaaaatggagaatagaattgggttttacaagagatacttggagtcaatcctggggtcaatttggactgtgctaaacaaacgccttttggccagtaaaataaactactacatagtcaaataatgtacttcttccagccatagtgattggtgagaaatatgttatccaaaatatttaagttatataataaaacaaagttatatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0031D11-98q2S/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0031D11.1" temp_strand="+" temp_description="C02SLe0031D11.1  AC215451.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0031D11 sequenced_by:kribb upload_account_name:korea">
        <position start="110062" stop="110924"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="110362" g_stop="110624" g_length="263"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="263" r_length="263" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0031D11.1" gen_strand="+" ref_id="SGN-U576039" ref_strand="+">
        <total_alignment_score>0.981</total_alignment_score>
        <cumulative_length_of_scored_exons>263</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0031D11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U576039" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="110362" e_stop="110624"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTATGGTTTAATCACCAACATAATTAATGGAGGAATAGAATGTGGAAAAGGTTCTAATCCAAAAATGGAGAATAGAATTGGGTTTTACAAGAGATACTTGGAGTCAATCCTGGGGTCAATTTGGACTGTGCTAAACAAACGCCTTTTGGCCAGTAAAATAAACTACTACATAGTCAAATAATGTACTTCTTCCAGCCATAGTGATTGGTGAGAAATATGTTATCCAAAATATTTAAGTTATATAATAAAACAAAGTTATATT</genome_strand>
        <mrna_strand>GCACGAGGTTAATCACCAACATAATTAATGGAGGAATAGAATGTGGAAAAGGTTCTAATCCAAAAATGGAGAATAGAATTGGGTTTTACAAGAGATACTTGGAGTCAATCCTGGGGTCAATTTGGACTGTGCTAAACAAACGCCTTTTGGCCAGTAAAATAAACTACTACATAGTCAAATAATGTACTTCTTCCAGCCATAGTGATTGGTGAGAAATATGTTATCCAAAATATTTAAGTTATATAATAAAACAAAGTTATATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0031D11-98q2S/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U584361" ref_strand="+" ref_description="SGN-U584361 Tomato 200607#2 [5 ESTs aligned] (*GB) gi|147788269|emb|CAN69960.1| (e_value=5e-76) hypothetical; (*ATH) AT2G17670.2 (e_value=2e-62) | Symbol: None | pentatricopeptide (PPR) repeat-containing protein, contains Pfam profile PF01535: PPR repeat | chr2:7681433-7683239 FORWARD | Aliases: None; (*SWP) sp|Q0WKZ3|PP105_ARATH (e_value=4e-17) Pentatricopeptide repeat-containing protein At1g64580 OS=Arabidopsis thaliana GN=At1g64580; ">
      <seq>ggaaccctaattttgtcctcacagaaggaagaagtgcttacaacaagacgaagaaacagctgagaaaatggggaaattaccaccttccttaaggtcagctaactttgctgtaaacactctcatcaaaactccatctccatccccatccccatccccacctccaacctcaaaaccccattattatcccaaaaaatcacaatcacccaagaaaaaacccacatcaattactgaaccccagcttccatcatctattctagcctttgattcaacatctctttcagatgctaaaacccttttcaattctctgatttccagtaccagaaacccctctacagacaacaaattttataatgcagttcttcaatcattttcctccaattcaactctccaagattcaatctttttccttaatcacatgatcaaggttcaccctcctttctcccctgacaggtttacataccatgttctcctcgtccaatcttgtaagtctgttgacctttctttatcccctgttcatcaggttcttaatcttatgactaccaatggtttccctcctaataaggtctccacagacattgctgtgaggaccctttgctcttccggccacgaagagcaagccattgagctagtgaaagaactttcctccaaagactctccccctgatacatatacttataattttattattaggcatttgtgcaagaacaggcctttgagtaccatgaataactttattaaagaaatgagggaaggttttgatataaaacctgatcttgttacatatacaattatgattgacaatgtttgtaatagtaaaaatcttagggaagcgactagattattaggagttctgagtgaggaaggctacaaccctgattgctatgtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0031D11-98q2S/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0031D11.1" temp_strand="+" temp_description="C02SLe0031D11.1  AC215451.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0031D11 sequenced_by:kribb upload_account_name:korea">
        <position start="112952" stop="114436"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="113251" g_stop="114136" g_length="886"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="886" r_length="886" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0031D11.1" gen_strand="+" ref_id="SGN-U584361" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>886</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0031D11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U584361" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="113251" e_stop="114136"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAACCCTAATTTTGTCCTCACAGAAGGAAGAAGTGGTTACAACAAGACGAAGAAACAGCTGAGAAAATGGGGAAATTACCACCTTCCTTAAGGTCAGCTAACTTTGCTGTAAACACTCTCATCAAAACTCCATCTCCATCCCCATCCCCATCCCCACCTCCAACCTCAAAACCCCATTATTATCCCAAAAAATCACAATCACCCAAGAAAAAACCCACATCAATTACTGAACCCCAGCTTCCATCATCTATTCTAGCCTTTGATTCAACATCTCTTTCAGATGCTAAAACCCTTTTCAATTCTCTGATTTCCAGTACCAGAAACCCCTCTACAGACAACAAATTTTATAATGCAGTTCTTCAATCATTTTCCTCCAATTCAACTCTCCAAGATTCAATCTTTTTCCTTAATCACATGATCAAGGTTCACCCTCCTTTCTCCCCTGACAGGTTTACATACCATGTTCTCCTCGTCCAATCTTGTAAGTCTGTTGACCTTTCTTTATCCCCTGTTCATCAGGTTCTTAATCTTATGACTACCAATGGTTTCCCTCCTAATAAGGTCTCCACAGACATTGCTGTGAGGACCCTTTGCTCTTCCGGCCACGAAGAGCAAGCCATTGAGCTAGTGAAAGAACTTTCCTCCAAAGACTCTCCCCCTGATACATATACTTATAATTTTATTATTAGGCATTTGTGCAAGAACAGGCCTTTGAGTACCATGAATAACTTTATTAAAGAAATGAGGGAAGGTTTTGATATAAAACCTGATCTTGTTACATATACAATTATGATTGACAATGTTTGTAATAGTAAAAATCTTAGGGAAGCGACTAGATTATTAGGAGTTCTGAGTGAGGAAGGCTACAAGCCTGATTGCTATGTT</genome_strand>
        <mrna_strand>GGAACCCTAATTTTGTCCTCACAGAAGGAAGAAGTGCTTACAACAAGACGAAGAAACAGCTGAGAAAATGGGGAAATTACCACCTTCCTTAAGGTCAGCTAACTTTGCTGTAAACACTCTCATCAAAACTCCATCTCCATCCCCATCCCCATCCCCACCTCCAACCTCAAAACCCCATTATTATCCCAAAAAATCACAATCACCCAAGAAAAAACCCACATCAATTACTGAACCCCAGCTTCCATCATCTATTCTAGCCTTTGATTCAACATCTCTTTCAGATGCTAAAACCCTTTTCAATTCTCTGATTTCCAGTACCAGAAACCCCTCTACAGACAACAAATTTTATAATGCAGTTCTTCAATCATTTTCCTCCAATTCAACTCTCCAAGATTCAATCTTTTTCCTTAATCACATGATCAAGGTTCACCCTCCTTTCTCCCCTGACAGGTTTACATACCATGTTCTCCTCGTCCAATCTTGTAAGTCTGTTGACCTTTCTTTATCCCCTGTTCATCAGGTTCTTAATCTTATGACTACCAATGGTTTCCCTCCTAATAAGGTCTCCACAGACATTGCTGTGAGGACCCTTTGCTCTTCCGGCCACGAAGAGCAAGCCATTGAGCTAGTGAAAGAACTTTCCTCCAAAGACTCTCCCCCTGATACATATACTTATAATTTTATTATTAGGCATTTGTGCAAGAACAGGCCTTTGAGTACCATGAATAACTTTATTAAAGAAATGAGGGAAGGTTTTGATATAAAACCTGATCTTGTTACATATACAATTATGATTGACAATGTTTGTAATAGTAAAAATCTTAGGGAAGCGACTAGATTATTAGGAGTTCTGAGTGAGGAAGGCTACAACCCTGATTGCTATGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>35</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="+" PGL_start="9343" PGL_stop="10235"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="9343" e_stop="10235"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.992"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.992">
            <gDNA_exon_boundary e_start="9343" e_stop="10235" e_length="893"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="9343" stop="10235"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U563383" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CGGTTATTGCCAAGCAATCCAAGGAGAAGCATATTGAGAAGCATGATAATGAATCTCTGAGTCAGAAACTGGATAACGGGGATGCAGTAACTAAGAAAAAAAGTAAGGGCGAGCAGAGTGAATTGCCACAGAATGGAACAAGAATGGTGCTTGATGGAGTGAGGCATCCAGTGCCGTATCACAAAAAAGAGCAAAAGGGAGGCGATGAATATCAGCAGACTTCTGCAAACCATTTGAAACTTGTACACAATGTTGTCAATGGTGCAACTACCAAGCAGCACAAGGTGAAAGAGAAGCGTATTGAGAAGCATGATAATGAATCTCTGAGTCAGAAACTGGATAACGGGGATGCAGTAACTAAGAAAAAAAGTAAGAGCGAGCAGAGTGAATTGCCACAAAATGGAACAAGAATGGTGCTTGAAGGAGTGAGGCATCCAGCGCCGTCTCACAAAAAAGAGCAAAAGGGAGGTGATAAATATCAGCATACTTCTGCAAACCATTTGAAACTTATACACAATGTTGTCAATGTTGCAACTACCAAGCAGCACAAGGTGAAAGAGAAGCGTGATTCCCCACAAGAACAGAAGGAAGAAAAGATTGAGTCGTTACATAGCAGAGAACTGGATTTGAAGGGTGGTAAGTTGGCTTCGGATGAGAAGAGTAAACCAAAAGCTGGAAAGCTAACACTTTCAGATCTTTTCAGGAGGTGAGTTTAACTGTATCTTGTAAAATCATATCCTCTTCAAAAGAGGAGCAAGAGCTGTGTCTTACCTTGTTTACCCCTTCTTTTTTACCATAGGAGTGTCTAGATCTCATGTACATGGCAATAGAATGAGCCGTAATTGCCATTTTTTGACTGTGACATGGTAATTATTTATTATTATTACATATCA</gDNA_template>
            <first_frame> R  L  L  P  S  N  P  R  R  S  I  L  R  S  M  I  M  N  L  *  V  R  N  W  I  T  G  M  Q  *  L  R  K  K  V  R  A  S  R  V  N  C  H  R  M  E  Q  E  W  C  L  M  E  *  G  I  Q  C  R  I  T  K  K  S  K  R  E  A  M  N  I  S  R  L  L  Q  T  I  *  N  L  Y  T  M  L  S  M  V  Q  L  P  S  S  T  R  *  K  R  S  V  L  R  S  M  I  M  N  L  *  V  R  N  W  I  T  G  M  Q  *  L  R  K  K  V  R  A  S  R  V  N  C  H  K  M  E  Q  E  W  C  L  K  E  *  G  I  Q  R  R  L  T  K  K  S  K  R  E  V  I  N  I  S  I  L  L  Q  T  I  *  N  L  Y  T  M  L  S  M  L  Q  L  P  S  S  T  R  *  K  R  S  V  I  P  H  K  N  R  R  K  K  R  L  S  R  Y  I  A  E  N  W  I  *  R  V  V  S  W  L  R  M  R  R  V  N  Q  K  L  E  S  *  H  F  Q  I  F  S  G  G  E  F  N  C  I  L  *  N  H  I  L  F  K  R  G  A  R  A  V  S  Y  L  V  Y  P  F  F  F  T  I  G  V  S  R  S  H  V  H  G  N  R  M  S  R  N  C  H  F  L  T  V  T  W  *  L  F  I  I  I  T  Y   </first_frame>
            <second_frame>  G  Y  C  Q  A  I  Q  G  E  A  Y  *  E  A  *  *  *  I  S  E  S  E  T  G  *  R  G  C  S  N  *  E  K  K  *  G  R  A  E  *  I  A  T  E  W  N  K  N  G  A  *  W  S  E  A  S  S  A  V  S  Q  K  R  A  K  G  R  R  *  I  S  A  D  F  C  K  P  F  E  T  C  T  Q  C  C  Q  W  C  N  Y  Q  A  A  Q  G  E  R  E  A  Y  *  E  A  *  *  *  I  S  E  S  E  T  G  *  R  G  C  S  N  *  E  K  K  *  E  R  A  E  *  I  A  T  K  W  N  K  N  G  A  *  R  S  E  A  S  S  A  V  S  Q  K  R  A  K  G  R  *  *  I  S  A  Y  F  C  K  P  F  E  T  Y  T  Q  C  C  Q  C  C  N  Y  Q  A  A  Q  G  E  R  E  A  *  F  P  T  R  T  E  G  R  K  D  *  V  V  T  *  Q  R  T  G  F  E  G  W  *  V  G  F  G  *  E  E  *  T  K  S  W  K  A  N  T  F  R  S  F  Q  E  V  S  L  T  V  S  C  K  I  I  S  S  S  K  E  E  Q  E  L  C  L  T  L  F  T  P  S  F  L  P  *  E  C  L  D  L  M  Y  M  A  I  E  *  A  V  I  A  I  F  *  L  *  H  G  N  Y  L  L  L  L  H  I  </second_frame>
            <third_frame>   V  I  A  K  Q  S  K  E  K  H  I  E  K  H  D  N  E  S  L  S  Q  K  L  D  N  G  D  A  V  T  K  K  K  S  K  G  E  Q  S  E  L  P  Q  N  G  T  R  M  V  L  D  G  V  R  H  P  V  P  Y  H  K  K  E  Q  K  G  G  D  E  Y  Q  Q  T  S  A  N  H  L  K  L  V  H  N  V  V  N  G  A  T  T  K  Q  H  K  V  K  E  K  R  I  E  K  H  D  N  E  S  L  S  Q  K  L  D  N  G  D  A  V  T  K  K  K  S  K  S  E  Q  S  E  L  P  Q  N  G  T  R  M  V  L  E  G  V  R  H  P  A  P  S  H  K  K  E  Q  K  G  G  D  K  Y  Q  H  T  S  A  N  H  L  K  L  I  H  N  V  V  N  V  A  T  T  K  Q  H  K  V  K  E  K  R  D  S  P  Q  E  Q  K  E  E  K  I  E  S  L  H  S  R  E  L  D  L  K  G  G  K  L  A  S  D  E  K  S  K  P  K  A  G  K  L  T  L  S  D  L  F  R  R  *  V  *  L  Y  L  V  K  S  Y  P  L  Q  K  R  S  K  S  C  V  L  P  C  L  P  L  L  F  Y  H  R  S  V  *  I  S  C  T  W  Q  *  N  E  P  *  L  P  F  F  D  C  D  M  V  I  I  Y  Y  Y  Y  I  S </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0031D11.1" strand="+"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="9345" stop="10052"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>705</number_coding_nucleotides>
                  <number_encoded_amino_acids>235</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VIAKQSKEKHIEKHDNESLSQKLDNGDAVTKKKSKGEQSELPQNGTRMVLDGVRHPVPYHKKEQKGGDEYQQTSANHLKLVHNVVNGATTKQHKVKEKRIEKHDNESLSQKLDNGDAVTKKKSKSEQSELPQNGTRMVLEGVRHPAPSHKKEQKGGDKYQHTSANHLKLIHNVVNVATTKQHKVKEKRDSPQEQKEEKIESLHSRELDLKGGKLASDEKSKPKAGKLTLSDLFRR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="+" PGL_start="14585" PGL_stop="17766"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="14585" e_stop="15033"/>
            <exon e_start="15124" e_stop="15265"/>
            <exon e_start="15375" e_stop="15431"/>
            <exon e_start="15598" e_stop="15643"/>
            <exon e_start="15756" e_stop="15887"/>
            <exon e_start="15978" e_stop="16112"/>
            <exon e_start="16413" e_stop="16502"/>
            <exon e_start="16583" e_stop="16804"/>
            <exon e_start="16895" e_stop="16993"/>
            <exon e_start="17091" e_stop="17269"/>
            <exon e_start="17347" e_stop="17766"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.998" e_score="0.989"/>
          <exon-intron don_prob="0.962" acc_prob="0.997" e_score="0.986"/>
          <exon-intron don_prob="0.983" acc_prob="0.975" e_score="0.982"/>
          <exon-intron don_prob="0.969" acc_prob="0.973" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.804" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.945" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.989" acc_prob="0.768" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.993" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.989">
            <gDNA_exon_boundary e_start="14585" e_stop="15033" e_length="449"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.998">
            <gDNA_intron_boundary i_start="15034" i_stop="15123" i_length="90"/>
          </intron>
          <exon e_serial="2" e_score="0.986">
            <gDNA_exon_boundary e_start="15124" e_stop="15265" e_length="142"/>
          </exon>
          <intron i_serial="2" don_prob="0.962" acc_prob="0.997">
            <gDNA_intron_boundary i_start="15266" i_stop="15374" i_length="109"/>
          </intron>
          <exon e_serial="3" e_score="0.982">
            <gDNA_exon_boundary e_start="15375" e_stop="15431" e_length="57"/>
          </exon>
          <intron i_serial="3" don_prob="0.983" acc_prob="0.975">
            <gDNA_intron_boundary i_start="15432" i_stop="15597" i_length="166"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="15598" e_stop="15643" e_length="46"/>
          </exon>
          <intron i_serial="4" don_prob="0.969" acc_prob="0.973">
            <gDNA_intron_boundary i_start="15644" i_stop="15755" i_length="112"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="15756" e_stop="15887" e_length="132"/>
          </exon>
          <intron i_serial="5" don_prob="0.996" acc_prob="0.804">
            <gDNA_intron_boundary i_start="15888" i_stop="15977" i_length="90"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="15978" e_stop="16112" e_length="135"/>
          </exon>
          <intron i_serial="6" don_prob="0.996" acc_prob="0.996">
            <gDNA_intron_boundary i_start="16113" i_stop="16412" i_length="300"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="16413" e_stop="16502" e_length="90"/>
          </exon>
          <intron i_serial="7" don_prob="0.999" acc_prob="0.998">
            <gDNA_intron_boundary i_start="16503" i_stop="16582" i_length="80"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="16583" e_stop="16804" e_length="222"/>
          </exon>
          <intron i_serial="8" don_prob="0.945" acc_prob="0.995">
            <gDNA_intron_boundary i_start="16805" i_stop="16894" i_length="90"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="16895" e_stop="16993" e_length="99"/>
          </exon>
          <intron i_serial="9" don_prob="0.989" acc_prob="0.768">
            <gDNA_intron_boundary i_start="16994" i_stop="17090" i_length="97"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="17091" e_stop="17269" e_length="179"/>
          </exon>
          <intron i_serial="10" don_prob="0.998" acc_prob="0.993">
            <gDNA_intron_boundary i_start="17270" i_stop="17346" i_length="77"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="17347" e_stop="17766" e_length="420"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="14585" stop="15033"/>
              <exon start="15124" stop="15265"/>
              <exon start="15375" stop="15431"/>
              <exon start="15598" stop="15643"/>
              <exon start="15756" stop="15887"/>
              <exon start="15978" stop="16112"/>
              <exon start="16413" stop="16502"/>
              <exon start="16583" stop="16804"/>
              <exon start="16895" stop="16993"/>
              <exon start="17091" stop="17269"/>
              <exon start="17347" stop="17766"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U585713" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTTGGTATTTTTAACCAGATACATTCCCATTTTTTTCTTACATTCTCCATCTTTTTCTCCCCCTTTCCATTTGTTCAACTTTTTTCAGAACTCTCTTGTTTCTTCATTGGTTCTTAATCAAGATTGATCAAGATTCAATCTTGGTAGAGGGTAACTGAAGAAGAGAGTGAAAGATTCAATTTTTTTTCCATTCTTGATTTAGGTTTTTTTCTGTAATCAAGATTCAATCTTGGAGAGGATTAAAGATTCTATTTTTTTTTCATTCTTGATTTGGGGTTTTTCAGTTATCAAGATTGATAAGATTCAATCTTGGTTGAGGGTAACTGAAGAAGAGGGTTCAAAAACATTTTTTTTCCATTCTTGATTTGGGGTTTTTAGTAACCAAGTAAAAGAAATGGCAATCACTGATGAGAACAAACATCCCTTGATTAAGGAATCTTCTGTTCGAG : TGAAAGATAGGGCTGAAATGGCTACCAGAAAGGTTGTTGGAGTGGAAACAAGAAGCAACCGAAGGGTTTTGGGCGCGATTAATCAGAATCTAGTGGGTGGTCAGGGGTATCCTTGTGTTGTTAACAAGAGAGGATTATCTGA : TGGAAATGGATTCTGTGACAAGAATCTTCCTGTTCATGGTCATCGACCCATCACGAG : GAAATATGCAGCACAAATTGCTAGCTCCCAGAAACACAGCTCAGAG : GAAAACAAGAAACCTAAGATAGCAGCTGAAAGTTTCAGCGTCTGGGAGGATGATATGGAGGCAGCTAATGATAAGCCTGTCCCTATGTCTTTGGAGCAAACAGAAAAAGTGTCAAAGGGCAAGGATCAAATG : ACATACATTCAGGAGGTTGAAATGGAGGATATCTTTGAGGAGGCTGTAATAGATATCGACGGTGATGATGCAAAGAACCATCTTGCAGCTGTTGAATATGTGGGAGATTTGTTTGCTAACTACAGAACAATGGAG : GTTAATAGCTGTGCTTCTCCATACTATATGGCACAACAGGCTGACATCAATGAGAGAATGCGGTCTATCTTGATTGACTGGCTAATTGAG : GTGCATCACAAGTTTGAGCTCAGGGAAGAGACGTTGTTCCTGACCGTCAATTTGATTGACCGGTTCTTGGAGAAGCAAGGCATTGTCAGAAAGAAGCTCCAGCTTGTTGGATTGGTTGCAATGCTACTAGCATGCAAGTATGAGGAGGTTTGTGCTCCACTGGTGGAGGATCTGGTGTTGATTTCGGACAAAGCCTATACAAGGAAGGAGGTTCTTGAAATG : GAAAGCATGATGCTCAACACACTGCAGTTTAATATGTCTGTCCCAACTGCATACGTTTTTATGCGAAGATATCTCAAGGCTGCTCAATGTGACAGGAAG : CTTGAGCTGCTGTCCTTCATGTTGGTTGAGCTTTGCCTTGTGGAGTATGAAATGCTCAAATTTCCACCATCCTTCATAGCTGCTGCAGCAATCTATACAGCTCAGACCACACTCTACGGTGTCCAGCAGTGGAGCAAGACGTGCGAGGTGCACACAACGTACTCAGAAGATCAACTTCT : GGAGTGCTCGAGATCAATTGTTGGCTACCACCAGAAGGCAGCAACAGGGAAACTAACAGGGGTACATAGGAAATACAGCATATCGAAATTTGGGTATGCAGCCAAGTGTGAGCCTGCCCATTTTCTTGTGCAGCAGACACAAGAATAGAGGAGAAGAGGGGCATGTACAGTTATTACTAACTTTATATGCAAATTGGGGATATATTTGTGGGGTGATGGAGAATTTATAGGAAAAGATAACTTAGCAACTAATGGTTGCCCCGGGGGATTTCATTATTTCTTTTTATAGAGTTCATTATTATTGCACTTTTACTATGTTCAACATTTGAACATCCCTGAATTTATTGTTTCAGTTACAGTTTTTCATTTACAAACAGAAATAAAAAGTCACAATTTTCTCAGAGTGGTTTTGCTTTATTG</gDNA_template>
            <first_frame> V  G  I  F  N  Q  I  H  S  H  F  F  L  T  F  S  I  F  F  S  P  F  P  F  V  Q  L  F  S  E  L  S  C  F  F  I  G  S  *  S  R  L  I  K  I  Q  S  W  *  R  V  T  E  E  E  S  E  R  F  N  F  F  S  I  L  D  L  G  F  F  L  *  S  R  F  N  L  G  E  D  *  R  F  Y  F  F  F  I  L  D  L  G  F  F  S  Y  Q  D  *  *  D  S  I  L  V  E  G  N  *  R  R  G  F  K  N  I  F  F  P  F  L  I  W  G  F  *  *  P  S  K  R  N  G  N  H  *  *  E  Q  T  S  L  D  *  G  I  F  C  S  S :   E  R  *  G  *  N  G  Y  Q  K  G  C  W  S  G  N  K  K  Q  P  K  G  F  G  R  D  *  S  E  S  S  G  W  S  G  V  S  L  C  C  *  Q  E  R  I  I  *  :  W  K  W  I  L  *  Q  E  S  S  C  S  W  S  S  T  H  H  E  :  E  I  C  S  T  N  C  *  L  P  E  T  Q  L  R   : G  K  Q  E  T  *  D  S  S  *  K  F  Q  R  L  G  G  *  Y  G  G  S  *  *  *  A  C  P  Y  V  F  G  A  N  R  K  S  V  K  G  Q  G  S  N   : D  I  H  S  G  G  *  N  G  G  Y  L  *  G  G  C  N  R  Y  R  R  *  *  C  K  E  P  S  C  S  C  *  I  C  G  R  F  V  C  *  L  Q  N  N  G   : G  *  *  L  C  F  S  I  L  Y  G  T  T  G  *  H  Q  *  E  N  A  V  Y  L  D  *  L  A  N  *   : G  A  S  Q  V  *  A  Q  G  R  D  V  V  P  D  R  Q  F  D  *  P  V  L  G  E  A  R  H  C  Q  K  E  A  P  A  C  W  I  G  C  N  A  T  S  M  Q  V  *  G  G  L  C  S  T  G  G  G  S  G  V  D  F  G  Q  S  L  Y  K  E  G  G  S  *  N   : G  K  H  D  A  Q  H  T  A  V  *  Y  V  C  P  N  C  I  R  F  Y  A  K  I  S  Q  G  C  S  M  *  Q  E   : A  *  A  A  V  L  H  V  G  *  A  L  P  C  G  V  *  N  A  Q  I  S  T  I  L  H  S  C  C  S  N  L  Y  S  S  D  H  T  L  R  C  P  A  V  E  Q  D  V  R  G  A  H  N  V  L  R  R  S  T  S  :  G  V  L  E  I  N  C  W  L  P  P  E  G  S  N  R  E  T  N  R  G  T  *  E  I  Q  H  I  E  I  W  V  C  S  Q  V  *  A  C  P  F  S  C  A  A  D  T  R  I  E  E  K  R  G  M  Y  S  Y  Y  *  L  Y  M  Q  I  G  D  I  F  V  G  *  W  R  I  Y  R  K  R  *  L  S  N  *  W  L  P  R  G  I  S  L  F  L  F  I  E  F  I  I  I  A  L  L  L  C  S  T  F  E  H  P  *  I  Y  C  F  S  Y  S  F  S  F  T  N  R  N  K  K  S  Q  F  S  Q  S  G  F  A  L  L </first_frame>
            <second_frame>  L  V  F  L  T  R  Y  I  P  I  F  F  L  H  S  P  S  F  S  P  P  F  H  L  F  N  F  F  Q  N  S  L  V  S  S  L  V  L  N  Q  D  *  S  R  F  N  L  G  R  G  *  L  K  K  R  V  K  D  S  I  F  F  P  F  L  I  *  V  F  F  C  N  Q  D  S  I  L  E  R  I  K  D  S  I  F  F  S  F  L  I  W  G  F  S  V  I  K  I  D  K  I  Q  S  W  L  R  V  T  E  E  E  G  S  K  T  F  F  F  H  S  *  F  G  V  F  S  N  Q  V  K  E  M  A  I  T  D  E  N  K  H  P  L  I  K  E  S  S  V  R   : V  K  D  R  A  E  M  A  T  R  K  V  V  G  V  E  T  R  S  N  R  R  V  L  G  A  I  N  Q  N  L  V  G  G  Q  G  Y  P  C  V  V  N  K  R  G  L  S  D :   G  N  G  F  C  D  K  N  L  P  V  H  G  H  R  P  I  T  R :   K  Y  A  A  Q  I  A  S  S  Q  K  H  S  S  E  :  E  N  K  K  P  K  I  A  A  E  S  F  S  V  W  E  D  D  M  E  A  A  N  D  K  P  V  P  M  S  L  E  Q  T  E  K  V  S  K  G  K  D  Q  M  :  T  Y  I  Q  E  V  E  M  E  D  I  F  E  E  A  V  I  D  I  D  G  D  D  A  K  N  H  L  A  A  V  E  Y  V  G  D  L  F  A  N  Y  R  T  M  E  :  V  N  S  C  A  S  P  Y  Y  M  A  Q  Q  A  D  I  N  E  R  M  R  S  I  L  I  D  W  L  I  E  :  V  H  H  K  F  E  L  R  E  E  T  L  F  L  T  V  N  L  I  D  R  F  L  E  K  Q  G  I  V  R  K  K  L  Q  L  V  G  L  V  A  M  L  L  A  C  K  Y  E  E  V  C  A  P  L  V  E  D  L  V  L  I  S  D  K  A  Y  T  R  K  E  V  L  E  M  :  E  S  M  M  L  N  T  L  Q  F  N  M  S  V  P  T  A  Y  V  F  M  R  R  Y  L  K  A  A  Q  C  D  R  K  :  L  E  L  L  S  F  M  L  V  E  L  C  L  V  E  Y  E  M  L  K  F  P  P  S  F  I  A  A  A  A  I  Y  T  A  Q  T  T  L  Y  G  V  Q  Q  W  S  K  T  C  E  V  H  T  T  Y  S  E  D  Q  L  L :   E  C  S  R  S  I  V  G  Y  H  Q  K  A  A  T  G  K  L  T  G  V  H  R  K  Y  S  I  S  K  F  G  Y  A  A  K  C  E  P  A  H  F  L  V  Q  Q  T  Q  E  *  R  R  R  G  A  C  T  V  I  T  N  F  I  C  K  L  G  I  Y  L  W  G  D  G  E  F  I  G  K  D  N  L  A  T  N  G  C  P  G  G  F  H  Y  F  F  L  *  S  S  L  L  L  H  F  Y  Y  V  Q  H  L  N  I  P  E  F  I  V  S  V  T  V  F  H  L  Q  T  E  I  K  S  H  N  F  L  R  V  V  L  L  Y   </second_frame>
            <third_frame>   W  Y  F  *  P  D  T  F  P  F  F  S  Y  I  L  H  L  F  L  P  L  S  I  C  S  T  F  F  R  T  L  L  F  L  H  W  F  L  I  K  I  D  Q  D  S  I  L  V  E  G  N  *  R  R  E  *  K  I  Q  F  F  F  H  S  *  F  R  F  F  S  V  I  K  I  Q  S  W  R  G  L  K  I  L  F  F  F  H  S  *  F  G  V  F  Q  L  S  R  L  I  R  F  N  L  G  *  G  *  L  K  K  R  V  Q  K  H  F  F  S  I  L  D  L  G  F  L  V  T  K  *  K  K  W  Q  S  L  M  R  T  N  I  P  *  L  R  N  L  L  F  E  :  *  K  I  G  L  K  W  L  P  E  R  L  L  E  W  K  Q  E  A  T  E  G  F  W  A  R  L  I  R  I  *  W  V  V  R  G  I  L  V  L  L  T  R  E  D  Y  L   : M  E  M  D  S  V  T  R  I  F  L  F  M  V  I  D  P  S  R   : G  N  M  Q  H  K  L  L  A  P  R  N  T  A  Q  R :   K  T  R  N  L  R  *  Q  L  K  V  S  A  S  G  R  M  I  W  R  Q  L  M  I  S  L  S  L  C  L  W  S  K  Q  K  K  C  Q  R  A  R  I  K  * :   H  T  F  R  R  L  K  W  R  I  S  L  R  R  L  *  *  I  S  T  V  M  M  Q  R  T  I  L  Q  L  L  N  M  W  E  I  C  L  L  T  T  E  Q  W  R :   L  I  A  V  L  L  H  T  I  W  H  N  R  L  T  S  M  R  E  C  G  L  S  *  L  T  G  *  L  R :   C  I  T  S  L  S  S  G  K  R  R  C  S  *  P  S  I  *  L  T  G  S  W  R  S  K  A  L  S  E  R  S  S  S  L  L  D  W  L  Q  C  Y  *  H  A  S  M  R  R  F  V  L  H  W  W  R  I  W  C  *  F  R  T  K  P  I  Q  G  R  R  F  L  K  W :   K  A  *  C  S  T  H  C  S  L  I  C  L  S  Q  L  H  T  F  L  C  E  D  I  S  R  L  L  N  V  T  G  S :   L  S  C  C  P  S  C  W  L  S  F  A  L  W  S  M  K  C  S  N  F  H  H  P  S  *  L  L  Q  Q  S  I  Q  L  R  P  H  S  T  V  S  S  S  G  A  R  R  A  R  C  T  Q  R  T  Q  K  I  N  F   : W  S  A  R  D  Q  L  L  A  T  T  R  R  Q  Q  Q  G  N  *  Q  G  Y  I  G  N  T  A  Y  R  N  L  G  M  Q  P  S  V  S  L  P  I  F  L  C  S  R  H  K  N  R  G  E  E  G  H  V  Q  L  L  L  T  L  Y  A  N  W  G  Y  I  C  G  V  M  E  N  L  *  E  K  I  T  *  Q  L  M  V  A  P  G  D  F  I  I  S  F  Y  R  V  H  Y  Y  C  T  F  T  M  F  N  I  *  T  S  L  N  L  L  F  Q  L  Q  F  F  I  Y  K  Q  K  *  K  V  T  I  F  S  E  W  F  C  F  I  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0031D11.1" strand="+"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="14949" stop="15033"/>
                    <exon start="15124" stop="15265"/>
                    <exon start="15375" stop="15431"/>
                    <exon start="15598" stop="15643"/>
                    <exon start="15756" stop="15887"/>
                    <exon start="15978" stop="16112"/>
                    <exon start="16413" stop="16502"/>
                    <exon start="16583" stop="16804"/>
                    <exon start="16895" stop="16993"/>
                    <exon start="17091" stop="17269"/>
                    <exon start="17347" stop="17494"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1332</number_coding_nucleotides>
                  <number_encoded_amino_acids>444</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FGVFSNQVKEMAITDENKHPLIKESSVRVKDRAEMATRKVVGVETRSNRRVLGAINQNLVGGQGYPCVVNKRGLSDGNGFCDKNLPVHGHRPITRKYAAQIASSQKHSSEENKKPKIAAESFSVWEDDMEAANDKPVPMSLEQTEKVSKGKDQMTYIQEVEMEDIFEEAVIDIDGDDAKNHLAAVEYVGDLFANYRTMEVNSCASPYYMAQQADINERMRSILIDWLIEVHHKFELREETLFLTVNLIDRFLEKQGIVRKKLQLVGLVAMLLACKYEEVCAPLVEDLVLISDKAYTRKEVLEMESMMLNTLQFNMSVPTAYVFMRRYLKAAQCDRKLELLSFMLVELCLVEYEMLKFPPSFIAAAAIYTAQTTLYGVQQWSKTCEVHTTYSEDQLLECSRSIVGYHQKAATGKLTGVHRKYSISKFGYAAKCEPAHFLVQQTQE*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="15754" e_stop="16523"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.994"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.994">
            <gDNA_exon_boundary e_start="15754" e_stop="16523" e_length="770"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15754" stop="16523"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U588280" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGGAAAACAAGAAACCTAAGATAGCAGCTGAAAGTTTCAGCGTCTGGGAGGATGATATGGAGGCAGCTAATGATAAGCCTGTCCCTATGTCTTTGGAGCAAACAGAAAAAGTGTCAAAGGGCAAGGATCAAATGGTAACAAAAACAATCCTGTCTTTAAACTTTCATTAATTAATACTAGTATATTAATGTATATGTTTTTAATTAATGAGCTGATCATTAAAGACATACATTCAGGAGGTTGAAATGGAGGATATCTTTGAGGAGGCTGTAATAGATATCGACGGTGATGATGCAAAGAACCATCTTGCAGCTGTTGAATATGTGGGAGATTTGTTTGCTAACTACAGAACAATGGAGGTTAGTTTAGCTCAGTAACTTACTAGTTAACAGTTGCATAGATCCTTAATTCGTAAGATTAACTGCTTAATTAAATCTTTATAGCTTTGTCTGATGTGATACATTTGAATCTCCACTGACTTTTAAAATCATTAGTTAGATCCTGACATATTACACCTTTTTACATTGTTTATACAACTTTACTTGGATAGATCCTATAGTTGTTTTTATTTATTTCAAATCGTAGCATCTATATTTATGAGTTGAATTTCATCATTGTATGTGTTTGGGAATGATTAAATCATTGTCCATTATATTCAGGTTAATAGCTGTGCTTCTCCATACTATATGGCACAACAGGCTGACATCAATGAGAGAATGCGGTCTATCTTGATTGACTGGCTAATTGAGGTATAGTAAATATTCCCTCTG</gDNA_template>
            <first_frame> R  K  T  R  N  L  R  *  Q  L  K  V  S  A  S  G  R  M  I  W  R  Q  L  M  I  S  L  S  L  C  L  W  S  K  Q  K  K  C  Q  R  A  R  I  K  W  *  Q  K  Q  S  C  L  *  T  F  I  N  *  Y  *  Y  I  N  V  Y  V  F  N  *  *  A  D  H  *  R  H  T  F  R  R  L  K  W  R  I  S  L  R  R  L  *  *  I  S  T  V  M  M  Q  R  T  I  L  Q  L  L  N  M  W  E  I  C  L  L  T  T  E  Q  W  R  L  V  *  L  S  N  L  L  V  N  S  C  I  D  P  *  F  V  R  L  T  A  *  L  N  L  Y  S  F  V  *  C  D  T  F  E  S  P  L  T  F  K  I  I  S  *  I  L  T  Y  Y  T  F  L  H  C  L  Y  N  F  T  W  I  D  P  I  V  V  F  I  Y  F  K  S  *  H  L  Y  L  *  V  E  F  H  H  C  M  C  L  G  M  I  K  S  L  S  I  I  F  R  L  I  A  V  L  L  H  T  I  W  H  N  R  L  T  S  M  R  E  C  G  L  S  *  L  T  G  *  L  R  Y  S  K  Y  S  L   </first_frame>
            <second_frame>  G  K  Q  E  T  *  D  S  S  *  K  F  Q  R  L  G  G  *  Y  G  G  S  *  *  *  A  C  P  Y  V  F  G  A  N  R  K  S  V  K  G  Q  G  S  N  G  N  K  N  N  P  V  F  K  L  S  L  I  N  T  S  I  L  M  Y  M  F  L  I  N  E  L  I  I  K  D  I  H  S  G  G  *  N  G  G  Y  L  *  G  G  C  N  R  Y  R  R  *  *  C  K  E  P  S  C  S  C  *  I  C  G  R  F  V  C  *  L  Q  N  N  G  G  *  F  S  S  V  T  Y  *  L  T  V  A  *  I  L  N  S  *  D  *  L  L  N  *  I  F  I  A  L  S  D  V  I  H  L  N  L  H  *  L  L  K  S  L  V  R  S  *  H  I  T  P  F  Y  I  V  Y  T  T  L  L  G  *  I  L  *  L  F  L  F  I  S  N  R  S  I  Y  I  Y  E  L  N  F  I  I  V  C  V  W  E  *  L  N  H  C  P  L  Y  S  G  *  *  L  C  F  S  I  L  Y  G  T  T  G  *  H  Q  *  E  N  A  V  Y  L  D  *  L  A  N  *  G  I  V  N  I  P  S  </second_frame>
            <third_frame>   E  N  K  K  P  K  I  A  A  E  S  F  S  V  W  E  D  D  M  E  A  A  N  D  K  P  V  P  M  S  L  E  Q  T  E  K  V  S  K  G  K  D  Q  M  V  T  K  T  I  L  S  L  N  F  H  *  L  I  L  V  Y  *  C  I  C  F  *  L  M  S  *  S  L  K  T  Y  I  Q  E  V  E  M  E  D  I  F  E  E  A  V  I  D  I  D  G  D  D  A  K  N  H  L  A  A  V  E  Y  V  G  D  L  F  A  N  Y  R  T  M  E  V  S  L  A  Q  *  L  T  S  *  Q  L  H  R  S  L  I  R  K  I  N  C  L  I  K  S  L  *  L  C  L  M  *  Y  I  *  I  S  T  D  F  *  N  H  *  L  D  P  D  I  L  H  L  F  T  L  F  I  Q  L  Y  L  D  R  S  Y  S  C  F  Y  L  F  Q  I  V  A  S  I  F  M  S  *  I  S  S  L  Y  V  F  G  N  D  *  I  I  V  H  Y  I  Q  V  N  S  C  A  S  P  Y  Y  M  A  Q  Q  A  D  I  N  E  R  M  R  S  I  L  I  D  W  L  I  E  V  *  *  I  F  P  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02SLe0031D11.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="+" PGL_start="22136" PGL_stop="23788"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="22136" e_stop="23788"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.996">
            <gDNA_exon_boundary e_start="22136" e_stop="23788" e_length="1653"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="22136" stop="23788"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U576886" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="22139" stop="22965"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U576885" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CAACCTTCTCTACACACAGTTTCTAAAGGGAAGAAAAAGGCAAACAAACAATCTGCGGCCATGGCTATGTCAGCTGCCACCACCCAATCGTTCCTCCTTAACAACAAAACCACCCGCCATAACTACCAAACCCTCAAATCCGCCACCCATATCGCCACCTTCCCCTCCACCACCACCCTAACCTCTACATACAAATCTATGTCTATTTCCTGCTCAGCCGCCGCCTCCACAACTACCACTCCCCTCCAAACACCCCCTACCACCTCATCAGATCGGGTCTTCAACTTCGCTGCCGGACCCGCCACGCTCCCGGAAAATGTCCTACAAAAAGCCCAAGCCGACCTCGTTAACTGGCGGGGCTCCGGCATGTCCGTTATGGAAATGAGCCACCGTGGAAAAGAATTCCTTTCCATTATTCAAAAAGCAGAATCAGATCTGAGAACCCTTCTTAATATCTCTGATGAATACGCCGTTCTTTTCCTTCAAGGTGGGGCCACCACCCAATTCGCCGCCATTCCTCTCAACATCTGCTCACCGGACGACGCCGTTGATTACATCGTCACCGGTTCATGGGGTGATAAGGCTTTCAAAGAAGCAGCTAAATACAGCAAACCGAATGTCATTTGGAGTGGTAAATCGGAAAAATACACCAAGATCCCGAATTTTGATTCGTTGGTACAAAACCCAGATGCCAAGTATTTGCATATATGCGCCAATGAAACTATTCATGGGGTTGAATTCAAAGATTACCCAACACCCCTTAACGAGAAAACCATTCTTGTTGCTGATATGTCCTCGAATTTCTGTTCAAAACCAGTAGATGTTTCTAAATTTGGTATCATTTACGCTGGTGCACAGAAAAATGTTGGTCCATCTGGAGTTACCATTGTGATTATAAGGAAAGATTTGATTGGAAATGCACAGGAAAGTACACCTGTGATGTTGGATTACAAGATCCATGCTGAGAACAATTCGTTGTATAACACACCCCCTTGTTATGGTATTTACATGTGCGGGCTTGTGTTTGAAGATCTGTTGGATCAAGGTGGATTAGTAGAGGTTGAGAAGAAGAATCAGAAGAAAGCTCAGATTTTGTATGATGCTATTGATTCTAGCAATGGATTTTACAGGTGCCCAGTTGATAAATCAGTGAGGTCTTTGATGAATGTGCCATTTACATTGGCTAAACCAGAATTGGAAGCTGAATTTGTGAAGACAGCTGCTGGTGAGAAGATGGTGCAGCTTAAGGGACATAGGTCTGTTGGTGGAATGAGGGCTTCAATATACAATGCTATGCCTTTGGCTGGAGTTGAAAAGTTGGTAGCTTTCATGAAGGAGTTCCAAGCTAAGCATGGTTAAAACTATATTGTTCTATTTTAATATTTGCAACCCTTTATAATTTTCTGTTTTTTTGTGCCTTTATGTTCTGTTGGTTTATTTGAGTTGAGAGAGAGAGTCTGAATGACAACACTTGAGTATGTGTTAGTCCTATTGATTCTTGTGTACTTCTAGGAAGTTTTTGTTTTTAGAAATATGGAAACTATTACTTAGTCCTATTAGAAGTTTAATGAAGAAGTATTTTCAATTTGTTTTTTTTGGTTTCATTGTTGAGCAGCACTCGCTCCATTTTATGAGGAATATGGTTGAATAAGT</gDNA_template>
            <first_frame> Q  P  S  L  H  T  V  S  K  G  K  K  K  A  N  K  Q  S  A  A  M  A  M  S  A  A  T  T  Q  S  F  L  L  N  N  K  T  T  R  H  N  Y  Q  T  L  K  S  A  T  H  I  A  T  F  P  S  T  T  T  L  T  S  T  Y  K  S  M  S  I  S  C  S  A  A  A  S  T  T  T  T  P  L  Q  T  P  P  T  T  S  S  D  R  V  F  N  F  A  A  G  P  A  T  L  P  E  N  V  L  Q  K  A  Q  A  D  L  V  N  W  R  G  S  G  M  S  V  M  E  M  S  H  R  G  K  E  F  L  S  I  I  Q  K  A  E  S  D  L  R  T  L  L  N  I  S  D  E  Y  A  V  L  F  L  Q  G  G  A  T  T  Q  F  A  A  I  P  L  N  I  C  S  P  D  D  A  V  D  Y  I  V  T  G  S  W  G  D  K  A  F  K  E  A  A  K  Y  S  K  P  N  V  I  W  S  G  K  S  E  K  Y  T  K  I  P  N  F  D  S  L  V  Q  N  P  D  A  K  Y  L  H  I  C  A  N  E  T  I  H  G  V  E  F  K  D  Y  P  T  P  L  N  E  K  T  I  L  V  A  D  M  S  S  N  F  C  S  K  P  V  D  V  S  K  F  G  I  I  Y  A  G  A  Q  K  N  V  G  P  S  G  V  T  I  V  I  I  R  K  D  L  I  G  N  A  Q  E  S  T  P  V  M  L  D  Y  K  I  H  A  E  N  N  S  L  Y  N  T  P  P  C  Y  G  I  Y  M  C  G  L  V  F  E  D  L  L  D  Q  G  G  L  V  E  V  E  K  K  N  Q  K  K  A  Q  I  L  Y  D  A  I  D  S  S  N  G  F  Y  R  C  P  V  D  K  S  V  R  S  L  M  N  V  P  F  T  L  A  K  P  E  L  E  A  E  F  V  K  T  A  A  G  E  K  M  V  Q  L  K  G  H  R  S  V  G  G  M  R  A  S  I  Y  N  A  M  P  L  A  G  V  E  K  L  V  A  F  M  K  E  F  Q  A  K  H  G  *  N  Y  I  V  L  F  *  Y  L  Q  P  F  I  I  F  C  F  F  V  P  L  C  S  V  G  L  F  E  L  R  E  R  V  *  M  T  T  L  E  Y  V  L  V  L  L  I  L  V  Y  F  *  E  V  F  V  F  R  N  M  E  T  I  T  *  S  Y  *  K  F  N  E  E  V  F  S  I  C  F  F  W  F  H  C  *  A  A  L  A  P  F  Y  E  E  Y  G  *  I  S </first_frame>
            <second_frame>  N  L  L  Y  T  Q  F  L  K  G  R  K  R  Q  T  N  N  L  R  P  W  L  C  Q  L  P  P  P  N  R  S  S  L  T  T  K  P  P  A  I  T  T  K  P  S  N  P  P  P  I  S  P  P  S  P  P  P  P  P  *  P  L  H  T  N  L  C  L  F  P  A  Q  P  P  P  P  Q  L  P  L  P  S  K  H  P  L  P  P  H  Q  I  G  S  S  T  S  L  P  D  P  P  R  S  R  K  M  S  Y  K  K  P  K  P  T  S  L  T  G  G  A  P  A  C  P  L  W  K  *  A  T  V  E  K  N  S  F  P  L  F  K  K  Q  N  Q  I  *  E  P  F  L  I  S  L  M  N  T  P  F  F  S  F  K  V  G  P  P  P  N  S  P  P  F  L  S  T  S  A  H  R  T  T  P  L  I  T  S  S  P  V  H  G  V  I  R  L  S  K  K  Q  L  N  T  A  N  R  M  S  F  G  V  V  N  R  K  N  T  P  R  S  R  I  L  I  R  W  Y  K  T  Q  M  P  S  I  C  I  Y  A  P  M  K  L  F  M  G  L  N  S  K  I  T  Q  H  P  L  T  R  K  P  F  L  L  L  I  C  P  R  I  S  V  Q  N  Q  *  M  F  L  N  L  V  S  F  T  L  V  H  R  K  M  L  V  H  L  E  L  P  L  *  L  *  G  K  I  *  L  E  M  H  R  K  V  H  L  *  C  W  I  T  R  S  M  L  R  T  I  R  C  I  T  H  P  L  V  M  V  F  T  C  A  G  L  C  L  K  I  C  W  I  K  V  D  *  *  R  L  R  R  R  I  R  R  K  L  R  F  C  M  M  L  L  I  L  A  M  D  F  T  G  A  Q  L  I  N  Q  *  G  L  *  *  M  C  H  L  H  W  L  N  Q  N  W  K  L  N  L  *  R  Q  L  L  V  R  R  W  C  S  L  R  D  I  G  L  L  V  E  *  G  L  Q  Y  T  M  L  C  L  W  L  E  L  K  S  W  *  L  S  *  R  S  S  K  L  S  M  V  K  T  I  L  F  Y  F  N  I  C  N  P  L  *  F  S  V  F  L  C  L  Y  V  L  L  V  Y  L  S  *  E  R  E  S  E  *  Q  H  L  S  M  C  *  S  Y  *  F  L  C  T  S  R  K  F  L  F  L  E  I  W  K  L  L  L  S  P  I  R  S  L  M  K  K  Y  F  Q  F  V  F  F  G  F  I  V  E  Q  H  S  L  H  F  M  R  N  M  V  E  *   </second_frame>
            <third_frame>   T  F  S  T  H  S  F  *  R  E  E  K  G  K  Q  T  I  C  G  H  G  Y  V  S  C  H  H  P  I  V  P  P  *  Q  Q  N  H  P  P  *  L  P  N  P  Q  I  R  H  P  Y  R  H  L  P  L  H  H  H  P  N  L  Y  I  Q  I  Y  V  Y  F  L  L  S  R  R  L  H  N  Y  H  S  P  P  N  T  P  Y  H  L  I  R  S  G  L  Q  L  R  C  R  T  R  H  A  P  G  K  C  P  T  K  S  P  S  R  P  R  *  L  A  G  L  R  H  V  R  Y  G  N  E  P  P  W  K  R  I  P  F  H  Y  S  K  S  R  I  R  S  E  N  P  S  *  Y  L  *  *  I  R  R  S  F  P  S  R  W  G  H  H  P  I  R  R  H  S  S  Q  H  L  L  T  G  R  R  R  *  L  H  R  H  R  F  M  G  *  *  G  F  Q  R  S  S  *  I  Q  Q  T  E  C  H  L  E  W  *  I  G  K  I  H  Q  D  P  E  F  *  F  V  G  T  K  P  R  C  Q  V  F  A  Y  M  R  Q  *  N  Y  S  W  G  *  I  Q  R  L  P  N  T  P  *  R  E  N  H  S  C  C  *  Y  V  L  E  F  L  F  K  T  S  R  C  F  *  I  W  Y  H  L  R  W  C  T  E  K  C  W  S  I  W  S  Y  H  C  D  Y  K  E  R  F  D  W  K  C  T  G  K  Y  T  C  D  V  G  L  Q  D  P  C  *  E  Q  F  V  V  *  H  T  P  L  L  W  Y  L  H  V  R  A  C  V  *  R  S  V  G  S  R  W  I  S  R  G  *  E  E  E  S  E  E  S  S  D  F  V  *  C  Y  *  F  *  Q  W  I  L  Q  V  P  S  *  *  I  S  E  V  F  D  E  C  A  I  Y  I  G  *  T  R  I  G  S  *  I  C  E  D  S  C  W  *  E  D  G  A  A  *  G  T  *  V  C  W  W  N  E  G  F  N  I  Q  C  Y  A  F  G  W  S  *  K  V  G  S  F  H  E  G  V  P  S  *  A  W  L  K  L  Y  C  S  I  L  I  F  A  T  L  Y  N  F  L  F  F  C  A  F  M  F  C  W  F  I  *  V  E  R  E  S  L  N  D  N  T  *  V  C  V  S  P  I  D  S  C  V  L  L  G  S  F  C  F  *  K  Y  G  N  Y  Y  L  V  L  L  E  V  *  *  R  S  I  F  N  L  F  F  L  V  S  L  L  S  S  T  R  S  I  L  *  G  I  W  L  N  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0031D11.1" strand="+"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="22136" stop="23494"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1356</number_coding_nucleotides>
                  <number_encoded_amino_acids>452</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QPSLHTVSKGKKKANKQSAAMAMSAATTQSFLLNNKTTRHNYQTLKSATHIATFPSTTTLTSTYKSMSISCSAAASTTTTPLQTPPTTSSDRVFNFAAGPATLPENVLQKAQADLVNWRGSGMSVMEMSHRGKEFLSIIQKAESDLRTLLNISDEYAVLFLQGGATTQFAAIPLNICSPDDAVDYIVTGSWGDKAFKEAAKYSKPNVIWSGKSEKYTKIPNFDSLVQNPDAKYLHICANETIHGVEFKDYPTPLNEKTILVADMSSNFCSKPVDVSKFGIIYAGAQKNVGPSGVTIVIIRKDLIGNAQESTPVMLDYKIHAENNSLYNTPPCYGIYMCGLVFEDLLDQGGLVEVEKKNQKKAQILYDAIDSSNGFYRCPVDKSVRSLMNVPFTLAKPELEAEFVKTAAGEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKEFQAKHG*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="-" PGL_start="23201" PGL_stop="22152"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="23201" e_stop="22636"/>
            <exon e_start="22248" e_stop="22152"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.995"/>
          <exon-only e_score="0.959"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.995">
            <gDNA_exon_boundary e_start="23201" e_stop="22636" e_length="566"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="22635" i_stop="22249" i_length="387"/>
          </intron>
          <exon e_serial="2" e_score="0.959">
            <gDNA_exon_boundary e_start="22248" e_stop="22152" e_length="97"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23201" stop="22636"/>
              <exon start="22248" stop="22152"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U588561" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCTCAACCTCTACTAATCCACCTTGATCCAACAGATCTTCAAACACAAGCCCGCACATGTAAATACCATAACAAGGGGGTGTGTTATACAACGAATTGTTCTCAGCATGGATCTTGTAATCCAACATCACAGGTGTACTTTCCTGTGCATTTCCAATCAAATCTTTCCTTATAATCACAATGGTAACTCCAGATGGACCAACATTTTTCTGTGCACCAGCGTAAATGATACCAAATTTAGAAACATCTACTGGTTTTGAACAGAAATTCGAGGACATATCAGCAACAAGAATGGTTTTCTCGTTAAGGGGTGTTGGGTAATCTTTGAATTCAACCCCATGAATAGTTTCATTGGCGCATATATGCAAATACTTGGCATCTGGGTTTTGTACCAACGAATCAAAATTCGGGATCTTGGTGTATTTTTCCGATTTACCACTCCAAATGACATTCGGTTTGCTGTATTTAGCTGCTTCTTTGAAAGCCTTATCACCCCATGAACCGGTGACGATGTAATCAACGGCGTCGTCCGGTGAGCAGATGTTGAGAGGAATGGCGGCGAATTGG : GTGGTTTTGTTGTTAAGGAGGAACGATTGGGTGGTGGCAGCTGACATAGCCATGGCCGCAGATTGTTTGTTTGCCTTTTTCTTCCCTTTAGAAACTG</gDNA_template>
            <first_frame> S  Q  P  L  L  I  H  L  D  P  T  D  L  Q  T  Q  A  R  T  C  K  Y  H  N  K  G  V  C  Y  T  T  N  C  S  Q  H  G  S  C  N  P  T  S  Q  V  Y  F  P  V  H  F  Q  S  N  L  S  L  *  S  Q  W  *  L  Q  M  D  Q  H  F  S  V  H  Q  R  K  *  Y  Q  I  *  K  H  L  L  V  L  N  R  N  S  R  T  Y  Q  Q  Q  E  W  F  S  R  *  G  V  L  G  N  L  *  I  Q  P  H  E  *  F  H  W  R  I  Y  A  N  T  W  H  L  G  F  V  P  T  N  Q  N  S  G  S  W  C  I  F  P  I  Y  H  S  K  *  H  S  V  C  C  I  *  L  L  L  *  K  P  Y  H  P  M  N  R  *  R  C  N  Q  R  R  R  P  V  S  R  C  *  E  E  W  R  R  I  G :   W  F  C  C  *  G  G  T  I  G  W  W  Q  L  T  *  P  W  P  Q  I  V  C  L  P  F  S  S  L  *  K  L </first_frame>
            <second_frame>  L  N  L  Y  *  S  T  L  I  Q  Q  I  F  K  H  K  P  A  H  V  N  T  I  T  R  G  C  V  I  Q  R  I  V  L  S  M  D  L  V  I  Q  H  H  R  C  T  F  L  C  I  S  N  Q  I  F  P  Y  N  H  N  G  N  S  R  W  T  N  I  F  L  C  T  S  V  N  D  T  K  F  R  N  I  Y  W  F  *  T  E  I  R  G  H  I  S  N  K  N  G  F  L  V  K  G  C  W  V  I  F  E  F  N  P  M  N  S  F  I  G  A  Y  M  Q  I  L  G  I  W  V  L  Y  Q  R  I  K  I  R  D  L  G  V  F  F  R  F  T  T  P  N  D  I  R  F  A  V  F  S  C  F  F  E  S  L  I  T  P  *  T  G  D  D  V  I  N  G  V  V  R  *  A  D  V  E  R  N  G  G  E  L   : G  G  F  V  V  K  E  E  R  L  G  G  G  S  *  H  S  H  G  R  R  L  F  V  C  L  F  L  P  F  R  N   </second_frame>
            <third_frame>   S  T  S  T  N  P  P  *  S  N  R  S  S  N  T  S  P  H  M  *  I  P  *  Q  G  G  V  L  Y  N  E  L  F  S  A  W  I  L  *  S  N  I  T  G  V  L  S  C  A  F  P  I  K  S  F  L  I  I  T  M  V  T  P  D  G  P  T  F  F  C  A  P  A  *  M  I  P  N  L  E  T  S  T  G  F  E  Q  K  F  E  D  I  S  A  T  R  M  V  F  S  L  R  G  V  G  *  S  L  N  S  T  P  *  I  V  S  L  A  H  I  C  K  Y  L  A  S  G  F  C  T  N  E  S  K  F  G  I  L  V  Y  F  S  D  L  P  L  Q  M  T  F  G  L  L  Y  L  A  A  S  L  K  A  L  S  P  H  E  P  V  T  M  *  S  T  A  S  S  G  E  Q  M  L  R  G  M  A  A  N  W  :  V  V  L  L  L  R  R  N  D  W  V  V  A  A  D  I  A  M  A  A  D  C  L  F  A  F  F  F  P  L  E  T  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0031D11.1" strand="-"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="23185" stop="22943"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>240</number_coding_nucleotides>
                  <number_encoded_amino_acids>80</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>STLIQQIFKHKPAHVNTITRGCVIQRIVLSMDLVIQHHRCTFLCISNQIFPYNHNGNSRWTNIFLCTSVNDTKFRNIYWF*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0031D11.1" strand="-"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="22942" stop="22703"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>237</number_coding_nucleotides>
                  <number_encoded_amino_acids>79</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TEIRGHISNKNGFLVKGCWVIFEFNPMNSFIGAYMQILGIWVLYQRIKIRDLGVFFRFTTPNDIRFAVFSCFFESLITP*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="-" PGL_start="35944" PGL_stop="24623"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="35944" e_stop="35795"/>
            <exon e_start="35223" e_stop="34715"/>
            <exon e_start="34512" e_stop="34397"/>
            <exon e_start="33690" e_stop="33564"/>
            <exon e_start="24985" e_stop="24623"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.997" e_score="0.987"/>
          <exon-intron don_prob="0.996" acc_prob="0.945" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.987">
            <gDNA_exon_boundary e_start="35944" e_stop="35795" e_length="150"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.997">
            <gDNA_intron_boundary i_start="35794" i_stop="35224" i_length="571"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="35223" e_stop="34715" e_length="509"/>
          </exon>
          <intron i_serial="2" don_prob="0.996" acc_prob="0.945">
            <gDNA_intron_boundary i_start="34714" i_stop="34513" i_length="202"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="34512" e_stop="34397" e_length="116"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="0.999">
            <gDNA_intron_boundary i_start="34396" i_stop="33691" i_length="706"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="33690" e_stop="33564" e_length="127"/>
          </exon>
          <intron i_serial="4" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="33563" i_stop="24986" i_length="8578"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="24985" e_stop="24623" e_length="363"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="35944" stop="35795"/>
              <exon start="35223" stop="34715"/>
              <exon start="34512" stop="34397"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U586457" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34841" stop="34715"/>
              <exon start="34512" stop="34397"/>
              <exon start="33690" stop="33564"/>
              <exon start="24985" stop="24623"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U586456" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTGAGATTTTTCTTTCTCGATTGATAGATACTCTTCTCAATAAAGGGATTTATTTAGTATTAGACACCGTTTCACTCTTTTTGCCGCTTGGACATTTTACAAGCATCTAGATCTGCAGTTCCCCACTGCTTCATCCATATTACTTCTCAG : TTGATGGATGAAACAGTTTAATCCCTACTTCTCAGAAGCTAAAGAGGAAATAATGGAGGGAGATATTAGTAGTGGGGCTGCAGATAATCACACGGAAGATGCTAGCAAAACAGAGGCACAGTTCAATAGCTTCAATATTGAGAGTGATCATGTAAAGGATAACGGAATATGTGAGAGTCACGAACATACAGGTGATAGCCATGATGATCTTGTACAAATGCTCGTAGAACTTAATTTCCAGAATGAATATCTGAAATCTCAGATTGTGGGATGGCAAAGCATCAACATATATTCTGATGACTCTGGTCAACAAATTAAAACGGCTGCACATGAAAATGTGGCAAGTGATAATTCAGAAGACCTTAATGAGAAGATCGAATCTTTGAATAGAGAACTTTTAGAGGAAAAGCAAACACGAGGTGCTGCAGAGGTAGCACTAAAGCATCTTCAAACTCTATATTTGGAAGCTGACACAAAGGCCCAAGAGTTGTCTGTCAAAGTTGCTGAAG : TACAAAATAAGATGGATCAGGAAATAAAAGAACGTGATGAGAAGTACTCAGAGCTAGACTCGAAGTTCAACAGACTTCACAAACGGGCAAAGCAGCGTATTCAAGAGGTGCAAAAG : GAAAAAGATGATCTTGAGGCCCAGTTTCGTGATGTCAATGAGAAATCTGAGCGCGCATCCTCGCAATTATCTGCATTGCAGCAAGAGTTGGAGCGCAGTAGACAACACGCTCAGGAGGCACTGAAAG : CAAGCCCGTCAAAAGATACATCAGGATCGGGGAGCTCACTGTTTTCTAGATTCTCATTCTCTTAACAGCCAATGAGGGCTGCAGAGATGCTTCCCAAATGTTGTCTTATCCAGCTTCAGTAGATAGTCTGTAGCAGACGTGGAAGGAGAGATACAGTAGAGGAATGTTTTGTGTTCTTATGTAATTAACAAAGAAATGCAAAAGAAGAACAAAACACAAAAAATGAGTAGGCATCCCTTGTCGTTCTTCACACGATATGTATATCAAAGGTATTTCGTTCTTCCTTTTTTTGTTTAATTGAGTGCAGAGAGAGAAGGAAGAGCACATTTGATAGAAATTGTAAAATTTTTGCGTAAGGAAACC</gDNA_template>
            <first_frame> L  R  F  F  F  L  D  *  *  I  L  F  S  I  K  G  F  I  *  Y  *  T  P  F  H  S  F  C  R  L  D  I  L  Q  A  S  R  S  A  V  P  H  C  F  I  H  I  T  S  Q  :  L  M  D  E  T  V  *  S  L  L  L  R  S  *  R  G  N  N  G  G  R  Y  *  *  W  G  C  R  *  S  H  G  R  C  *  Q  N  R  G  T  V  Q  *  L  Q  Y  *  E  *  S  C  K  G  *  R  N  M  *  E  S  R  T  Y  R  *  *  P  *  *  S  C  T  N  A  R  R  T  *  F  P  E  *  I  S  E  I  S  D  C  G  M  A  K  H  Q  H  I  F  *  *  L  W  S  T  N  *  N  G  C  T  *  K  C  G  K  *  *  F  R  R  P  *  *  E  D  R  I  F  E  *  R  T  F  R  G  K  A  N  T  R  C  C  R  G  S  T  K  A  S  S  N  S  I  F  G  S  *  H  K  G  P  R  V  V  C  Q  S  C  *  S :   T  K  *  D  G  S  G  N  K  R  T  *  *  E  V  L  R  A  R  L  E  V  Q  Q  T  S  Q  T  G  K  A  A  Y  S  R  G  A  K   : G  K  R  *  S  *  G  P  V  S  *  C  Q  *  E  I  *  A  R  I  L  A  I  I  C  I  A  A  R  V  G  A  Q  *  T  T  R  S  G  G  T  E  S :   K  P  V  K  R  Y  I  R  I  G  E  L  T  V  F  *  I  L  I  L  L  T  A  N  E  G  C  R  D  A  S  Q  M  L  S  Y  P  A  S  V  D  S  L  *  Q  T  W  K  E  R  Y  S  R  G  M  F  C  V  L  M  *  L  T  K  K  C  K  R  R  T  K  H  K  K  *  V  G  I  P  C  R  S  S  H  D  M  Y  I  K  G  I  S  F  F  L  F  L  F  N  *  V  Q  R  E  K  E  E  H  I  *  *  K  L  *  N  F  C  V  R  K   </first_frame>
            <second_frame>  *  D  F  S  F  S  I  D  R  Y  S  S  Q  *  R  D  L  F  S  I  R  H  R  F  T  L  F  A  A  W  T  F  Y  K  H  L  D  L  Q  F  P  T  A  S  S  I  L  L  L  S :   *  W  M  K  Q  F  N  P  Y  F  S  E  A  K  E  E  I  M  E  G  D  I  S  S  G  A  A  D  N  H  T  E  D  A  S  K  T  E  A  Q  F  N  S  F  N  I  E  S  D  H  V  K  D  N  G  I  C  E  S  H  E  H  T  G  D  S  H  D  D  L  V  Q  M  L  V  E  L  N  F  Q  N  E  Y  L  K  S  Q  I  V  G  W  Q  S  I  N  I  Y  S  D  D  S  G  Q  Q  I  K  T  A  A  H  E  N  V  A  S  D  N  S  E  D  L  N  E  K  I  E  S  L  N  R  E  L  L  E  E  K  Q  T  R  G  A  A  E  V  A  L  K  H  L  Q  T  L  Y  L  E  A  D  T  K  A  Q  E  L  S  V  K  V  A  E   : V  Q  N  K  M  D  Q  E  I  K  E  R  D  E  K  Y  S  E  L  D  S  K  F  N  R  L  H  K  R  A  K  Q  R  I  Q  E  V  Q  K  :  E  K  D  D  L  E  A  Q  F  R  D  V  N  E  K  S  E  R  A  S  S  Q  L  S  A  L  Q  Q  E  L  E  R  S  R  Q  H  A  Q  E  A  L  K   : A  S  P  S  K  D  T  S  G  S  G  S  S  L  F  S  R  F  S  F  S  *  Q  P  M  R  A  A  E  M  L  P  K  C  C  L  I  Q  L  Q  *  I  V  C  S  R  R  G  R  R  D  T  V  E  E  C  F  V  F  L  C  N  *  Q  R  N  A  K  E  E  Q  N  T  K  N  E  *  A  S  L  V  V  L  H  T  I  C  I  S  K  V  F  R  S  S  F  F  C  L  I  E  C  R  E  R  R  K  S  T  F  D  R  N  C  K  I  F  A  *  G  N  </second_frame>
            <third_frame>   E  I  F  L  S  R  L  I  D  T  L  L  N  K  G  I  Y  L  V  L  D  T  V  S  L  F  L  P  L  G  H  F  T  S  I  *  I  C  S  S  P  L  L  H  P  Y  Y  F  S   : V  D  G  *  N  S  L  I  P  T  S  Q  K  L  K  R  K  *  W  R  E  I  L  V  V  G  L  Q  I  I  T  R  K  M  L  A  K  Q  R  H  S  S  I  A  S  I  L  R  V  I  M  *  R  I  T  E  Y  V  R  V  T  N  I  Q  V  I  A  M  M  I  L  Y  K  C  S  *  N  L  I  S  R  M  N  I  *  N  L  R  L  W  D  G  K  A  S  T  Y  I  L  M  T  L  V  N  K  L  K  R  L  H  M  K  M  W  Q  V  I  I  Q  K  T  L  M  R  R  S  N  L  *  I  E  N  F  *  R  K  S  K  H  E  V  L  Q  R  *  H  *  S  I  F  K  L  Y  I  W  K  L  T  Q  R  P  K  S  C  L  S  K  L  L  K  :  Y  K  I  R  W  I  R  K  *  K  N  V  M  R  S  T  Q  S  *  T  R  S  S  T  D  F  T  N  G  Q  S  S  V  F  K  R  C  K  R :   K  K  M  I  L  R  P  S  F  V  M  S  M  R  N  L  S  A  H  P  R  N  Y  L  H  C  S  K  S  W  S  A  V  D  N  T  L  R  R  H  *  K  :  Q  A  R  Q  K  I  H  Q  D  R  G  A  H  C  F  L  D  S  H  S  L  N  S  Q  *  G  L  Q  R  C  F  P  N  V  V  L  S  S  F  S  R  *  S  V  A  D  V  E  G  E  I  Q  *  R  N  V  L  C  S  Y  V  I  N  K  E  M  Q  K  K  N  K  T  Q  K  M  S  R  H  P  L  S  F  F  T  R  Y  V  Y  Q  R  Y  F  V  L  P  F  F  V  *  L  S  A  E  R  E  G  R  A  H  L  I  E  I  V  K  F  L  R  K  E  T </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0031D11.1" strand="-"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="35219" stop="34715"/>
                    <exon start="34512" stop="34397"/>
                    <exon start="33690" stop="33564"/>
                    <exon start="24985" stop="24921"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>810</number_coding_nucleotides>
                  <number_encoded_amino_acids>270</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>WMKQFNPYFSEAKEEIMEGDISSGAADNHTEDASKTEAQFNSFNIESDHVKDNGICESHEHTGDSHDDLVQMLVELNFQNEYLKSQIVGWQSINIYSDDSGQQIKTAAHENVASDNSEDLNEKIESLNRELLEEKQTRGAAEVALKHLQTLYLEADTKAQELSVKVAEVQNKMDQEIKERDEKYSELDSKFNRLHKRAKQRIQEVQKEKDDLEAQFRDVNEKSERASSQLSALQQELERSRQHAQEALKASPSKDTSGSGSSLFSRFSFS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="29963" e_stop="29884"/>
            <exon e_start="29808" e_stop="29729"/>
            <exon e_start="28553" e_stop="28425"/>
            <exon e_start="28323" e_stop="28223"/>
            <exon e_start="27972" e_stop="27839"/>
            <exon e_start="27740" e_stop="27643"/>
            <exon e_start="27571" e_stop="27452"/>
            <exon e_start="27335" e_stop="27308"/>
            <exon e_start="27204" e_stop="27146"/>
            <exon e_start="26171" e_stop="26100"/>
            <exon e_start="26024" e_stop="25977"/>
            <exon e_start="25763" e_stop="25658"/>
            <exon e_start="25541" e_stop="25483"/>
            <exon e_start="25031" e_stop="24948"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.418" acc_prob="0.889" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.867" e_score="1.000"/>
          <exon-intron don_prob="0.895" acc_prob="0.903" e_score="1.000"/>
          <exon-intron don_prob="0.678" acc_prob="0.969" e_score="1.000"/>
          <exon-intron don_prob="0.911" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.222" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.924" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.749" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.227" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.986" e_score="1.000"/>
          <exon-intron don_prob="0.926" acc_prob="0.987" e_score="1.000"/>
          <exon-intron don_prob="0.993" acc_prob="0.984" e_score="1.000"/>
          <exon-only e_score="0.988"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="29963" e_stop="29884" e_length="80"/>
          </exon>
          <intron i_serial="1" don_prob="0.418" acc_prob="0.889">
            <gDNA_intron_boundary i_start="29883" i_stop="29809" i_length="75"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="29808" e_stop="29729" e_length="80"/>
          </exon>
          <intron i_serial="2" don_prob="0.994" acc_prob="0.993">
            <gDNA_intron_boundary i_start="29728" i_stop="28554" i_length="1175"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="28553" e_stop="28425" e_length="129"/>
          </exon>
          <intron i_serial="3" don_prob="0.995" acc_prob="0.867">
            <gDNA_intron_boundary i_start="28424" i_stop="28324" i_length="101"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="28323" e_stop="28223" e_length="101"/>
          </exon>
          <intron i_serial="4" don_prob="0.895" acc_prob="0.903">
            <gDNA_intron_boundary i_start="28222" i_stop="27973" i_length="250"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="27972" e_stop="27839" e_length="134"/>
          </exon>
          <intron i_serial="5" don_prob="0.678" acc_prob="0.969">
            <gDNA_intron_boundary i_start="27838" i_stop="27741" i_length="98"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="27740" e_stop="27643" e_length="98"/>
          </exon>
          <intron i_serial="6" don_prob="0.911" acc_prob="0.996">
            <gDNA_intron_boundary i_start="27642" i_stop="27572" i_length="71"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="27571" e_stop="27452" e_length="120"/>
          </exon>
          <intron i_serial="7" don_prob="0.222" acc_prob="0.998">
            <gDNA_intron_boundary i_start="27451" i_stop="27336" i_length="116"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="27335" e_stop="27308" e_length="28"/>
          </exon>
          <intron i_serial="8" don_prob="1.000" acc_prob="0.924">
            <gDNA_intron_boundary i_start="27307" i_stop="27205" i_length="103"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="27204" e_stop="27146" e_length="59"/>
          </exon>
          <intron i_serial="9" don_prob="0.999" acc_prob="0.749">
            <gDNA_intron_boundary i_start="27145" i_stop="26172" i_length="974"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="26171" e_stop="26100" e_length="72"/>
          </exon>
          <intron i_serial="10" don_prob="0.999" acc_prob="0.227">
            <gDNA_intron_boundary i_start="26099" i_stop="26025" i_length="75"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="26024" e_stop="25977" e_length="48"/>
          </exon>
          <intron i_serial="11" don_prob="1.000" acc_prob="0.986">
            <gDNA_intron_boundary i_start="25976" i_stop="25764" i_length="213"/>
          </intron>
          <exon e_serial="12" e_score="1.000">
            <gDNA_exon_boundary e_start="25763" e_stop="25658" e_length="106"/>
          </exon>
          <intron i_serial="12" don_prob="0.926" acc_prob="0.987">
            <gDNA_intron_boundary i_start="25657" i_stop="25542" i_length="116"/>
          </intron>
          <exon e_serial="13" e_score="1.000">
            <gDNA_exon_boundary e_start="25541" e_stop="25483" e_length="59"/>
          </exon>
          <intron i_serial="13" don_prob="0.993" acc_prob="0.984">
            <gDNA_intron_boundary i_start="25482" i_stop="25032" i_length="451"/>
          </intron>
          <exon e_serial="14" e_score="0.988">
            <gDNA_exon_boundary e_start="25031" e_stop="24948" e_length="84"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29963" stop="29884"/>
              <exon start="29808" stop="29729"/>
              <exon start="28553" stop="28425"/>
              <exon start="28323" stop="28223"/>
              <exon start="27972" stop="27839"/>
              <exon start="27740" stop="27643"/>
              <exon start="27571" stop="27452"/>
              <exon start="27335" stop="27308"/>
              <exon start="27204" stop="27146"/>
              <exon start="26171" stop="26100"/>
              <exon start="26024" stop="25977"/>
              <exon start="25763" stop="25658"/>
              <exon start="25541" stop="25483"/>
              <exon start="25031" stop="24948"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U586458" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CTGCCATTCACTCAGAACAAAGCTGGAGATTGCTGAGAGTAACTGCATCCGTGCCGAGATTGAAGCGGCCAAATTTAGAA : GTCAACTGGAGTCACAGTTATCTGCTCAGTCCCAGGTATTAAACTCAAAAGAGGCTGAATTGATGGCGGCCAAAGAAGAG : ATCAATCGCACTCAAAGTGAGTTTTCATCTTACAAGGCTCGTGCTCACGCACTTCTCCAGCGAAAGGATGCTGAATTGGCTGCTGCTAGGGACAGCGAACAACTTAAAGCACTGGAGGAAGCATTGAAG : GAAGTGGAGAAAGAGGTAATGTCAGTCTCTTCTGAAAGGGATAGAGCCCTTCAAGATCTAAAGAGCACCTTAATTAATCATGAGAAGGAACTTTCGGACAG : AGATGAAGCTCTTCGTGCTACAGAGCAACGGATCAGAAGCATGGAAATGAAGTTCAATTCTGCTATTTCTGCTCACCAAAAAGAGAAGGAAGCATGGGAAATAAGCCTTCAAAATGTAGAAGAAACATGGCGAT : TGAAATGTGATGCATTTAAAGCAGAGAGTGTGGTTACCTCTGGTGATAATGTTCAAAAAGAACTAGATGACCTCAAACAAAGCTGTAAAAAACTGAAG : GAAGAGCTTGATTCTTTTCGTGACCTTGCTGATAAGATGATTGAGGAGAAGGACAATGAAATCTCTAGACTTCTAGACGATAACGAGAACCTTCGCCACAAACTTCAGTCTGAATTTTTA : GCCGATCGCAATGGCAATTCCAATACAG : TATATGACAAGCAAGATCCTCTGAATTCGACTACCTCAGCTGCTGATCAGCAGATTCTG : GTCTTGGCGAGACAACAAGCACAAAGAGAAGAAGAGCTTGCTCAGTCACAACGTCACATTCTAGCCCTTCAA : GAGGAGATAGAAGAGCTTGAACGTGAAAATCGTCTCCACAGCCAGCAG : GAAGCTAAGTTGAAAGAGGAGCTTAGGAATATGGATAGATCACAGAAGAGGGAAGGGGTAGATCTGACGTATCTTAAGAATGTCATTTTAAAACTTCTCGAGACAG : GTGAAGTGGAGGCTCTATTACCTGTGGTTGCAATGCTTCTTCAGTTCAGTCCTGAGGAG : ATGCGGAAGTGCCAACAAGCCTATCGCTCCTCCATAGAAGCTCAAGCAAGCCCGTCAAAAGATACATCAGGATCGGGGAGCTCA</gDNA_template>
            <first_frame> L  P  F  T  Q  N  K  A  G  D  C  *  E  *  L  H  P  C  R  D  *  S  G  Q  I  *  K :   S  T  G  V  T  V  I  C  S  V  P  G  I  K  L  K  R  G  *  I  D  G  G  Q  R  R   : D  Q  S  H  S  K  *  V  F  I  L  Q  G  S  C  S  R  T  S  P  A  K  G  C  *  I  G  C  C  *  G  Q  R  T  T  *  S  T  G  G  S  I  E   : G  S  G  E  R  G  N  V  S  L  F  *  K  G  *  S  P  S  R  S  K  E  H  L  N  *  S  *  E  G  T  F  G  Q  :  R  *  S  S  S  C  Y  R  A  T  D  Q  K  H  G  N  E  V  Q  F  C  Y  F  C  S  P  K  R  E  G  S  M  G  N  K  P  S  K  C  R  R  N  M  A  I :   E  M  *  C  I  *  S  R  E  C  G  Y  L  W  *  *  C  S  K  R  T  R  *  P  Q  T  K  L  *  K  T  E   : G  R  A  *  F  F  S  *  P  C  *  *  D  D  *  G  E  G  Q  *  N  L  *  T  S  R  R  *  R  E  P  S  P  Q  T  S  V  *  I  F   : S  R  S  Q  W  Q  F  Q  Y  S :   I  *  Q  A  R  S  S  E  F  D  Y  L  S  C  *  S  A  D  S   : G  L  G  E  T  T  S  T  K  R  R  R  A  C  S  V  T  T  S  H  S  S  P  S   : R  G  D  R  R  A  *  T  *  K  S  S  P  Q  P  A   : G  S  *  V  E  R  G  A  *  E  Y  G  *  I  T  E  E  G  R  G  R  S  D  V  S  *  E  C  H  F  K  T  S  R  D  R :   *  S  G  G  S  I  T  C  G  C  N  A  S  S  V  Q  S  *  G   : D  A  E  V  P  T  S  L  S  L  L  H  R  S  S  S  K  P  V  K  R  Y  I  R  I  G  E  L  </first_frame>
            <second_frame>  C  H  S  L  R  T  K  L  E  I  A  E  S  N  C  I  R  A  E  I  E  A  A  K  F  R   : S  Q  L  E  S  Q  L  S  A  Q  S  Q  V  L  N  S  K  E  A  E  L  M  A  A  K  E  E  :  I  N  R  T  Q  S  E  F  S  S  Y  K  A  R  A  H  A  L  L  Q  R  K  D  A  E  L  A  A  A  R  D  S  E  Q  L  K  A  L  E  E  A  L  K  :  E  V  E  K  E  V  M  S  V  S  S  E  R  D  R  A  L  Q  D  L  K  S  T  L  I  N  H  E  K  E  L  S  D  R :   D  E  A  L  R  A  T  E  Q  R  I  R  S  M  E  M  K  F  N  S  A  I  S  A  H  Q  K  E  K  E  A  W  E  I  S  L  Q  N  V  E  E  T  W  R   : L  K  C  D  A  F  K  A  E  S  V  V  T  S  G  D  N  V  Q  K  E  L  D  D  L  K  Q  S  C  K  K  L  K  :  E  E  L  D  S  F  R  D  L  A  D  K  M  I  E  E  K  D  N  E  I  S  R  L  L  D  D  N  E  N  L  R  H  K  L  Q  S  E  F  L  :  A  D  R  N  G  N  S  N  T   : V  Y  D  K  Q  D  P  L  N  S  T  T  S  A  A  D  Q  Q  I  L  :  V  L  A  R  Q  Q  A  Q  R  E  E  E  L  A  Q  S  Q  R  H  I  L  A  L  Q  :  E  E  I  E  E  L  E  R  E  N  R  L  H  S  Q  Q  :  E  A  K  L  K  E  E  L  R  N  M  D  R  S  Q  K  R  E  G  V  D  L  T  Y  L  K  N  V  I  L  K  L  L  E  T   : G  E  V  E  A  L  L  P  V  V  A  M  L  L  Q  F  S  P  E  E  :  M  R  K  C  Q  Q  A  Y  R  S  S  I  E  A  Q  A  S  P  S  K  D  T  S  G  S  G  S  S </second_frame>
            <third_frame>   A  I  H  S  E  Q  S  W  R  L  L  R  V  T  A  S  V  P  R  L  K  R  P  N  L  E  :  V  N  W  S  H  S  Y  L  L  S  P  R  Y  *  T  Q  K  R  L  N  *  W  R  P  K  K  R :   S  I  A  L  K  V  S  F  H  L  T  R  L  V  L  T  H  F  S  S  E  R  M  L  N  W  L  L  L  G  T  A  N  N  L  K  H  W  R  K  H  *  R :   K  W  R  K  R  *  C  Q  S  L  L  K  G  I  E  P  F  K  I  *  R  A  P  *  L  I  M  R  R  N  F  R  T   : E  M  K  L  F  V  L  Q  S  N  G  S  E  A  W  K  *  S  S  I  L  L  F  L  L  T  K  K  R  R  K  H  G  K  *  A  F  K  M  *  K  K  H  G  D  :  *  N  V  M  H  L  K  Q  R  V  W  L  P  L  V  I  M  F  K  K  N  *  M  T  S  N  K  A  V  K  N  *  R :   K  S  L  I  L  F  V  T  L  L  I  R  *  L  R  R  R  T  M  K  S  L  D  F  *  T  I  T  R  T  F  A  T  N  F  S  L  N  F  * :   P  I  A  M  A  I  P  I  Q  :  Y  M  T  S  K  I  L  *  I  R  L  P  Q  L  L  I  S  R  F  W :   S  W  R  D  N  K  H  K  E  K  K  S  L  L  S  H  N  V  T  F  *  P  F  K :   R  R  *  K  S  L  N  V  K  I  V  S  T  A  S  R :   K  L  S  *  K  R  S  L  G  I  W  I  D  H  R  R  G  K  G  *  I  *  R  I  L  R  M  S  F  *  N  F  S  R  Q  :  V  K  W  R  L  Y  Y  L  W  L  Q  C  F  F  S  S  V  L  R  R :   C  G  S  A  N  K  P  I  A  P  P  *  K  L  K  Q  A  R  Q  K  I  H  Q  D  R  G  A   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0031D11.1" strand="-"/>
                <serials PGL_serial="5" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="29962" stop="29884"/>
                    <exon start="29808" stop="29729"/>
                    <exon start="28553" stop="28425"/>
                    <exon start="28323" stop="28223"/>
                    <exon start="27972" stop="27839"/>
                    <exon start="27740" stop="27643"/>
                    <exon start="27571" stop="27452"/>
                    <exon start="27335" stop="27308"/>
                    <exon start="27204" stop="27146"/>
                    <exon start="26171" stop="26100"/>
                    <exon start="26024" stop="25977"/>
                    <exon start="25763" stop="25658"/>
                    <exon start="25541" stop="25483"/>
                    <exon start="25031" stop="24948"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1197</number_coding_nucleotides>
                  <number_encoded_amino_acids>399</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CHSLRTKLEIAESNCIRAEIEAAKFRSQLESQLSAQSQVLNSKEAELMAAKEEINRTQSEFSSYKARAHALLQRKDAELAAARDSEQLKALEEALKEVEKEVMSVSSERDRALQDLKSTLINHEKELSDRDEALRATEQRIRSMEMKFNSAISAHQKEKEAWEISLQNVEETWRLKCDAFKAESVVTSGDNVQKELDDLKQSCKKLKEELDSFRDLADKMIEEKDNEISRLLDDNENLRHKLQSEFLADRNGNSNTVYDKQDPLNSTTSAADQQILVLARQQAQREEELAQSQRHILALQEEIEELERENRLHSQQEAKLKEELRNMDRSQKREGVDLTYLKNVILKLLETGEVEALLPVVAMLLQFSPEEMRKCQQAYRSSIEAQASPSKDTSGSGSS</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="-" PGL_start="43333" PGL_stop="39062"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="43333" e_stop="43080"/>
            <exon e_start="42236" e_stop="42039"/>
            <exon e_start="41946" e_stop="41887"/>
            <exon e_start="41440" e_stop="41345"/>
            <exon e_start="41240" e_stop="41216"/>
            <exon e_start="41039" e_stop="40945"/>
            <exon e_start="39247" e_stop="39062"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.968" e_score="1.000"/>
          <exon-intron don_prob="0.716" acc_prob="0.765" e_score="1.000"/>
          <exon-intron don_prob="0.518" acc_prob="0.714" e_score="1.000"/>
          <exon-intron don_prob="0.987" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.990" acc_prob="0.947" e_score="1.000"/>
          <exon-intron don_prob="0.990" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="43333" e_stop="43080" e_length="254"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.968">
            <gDNA_intron_boundary i_start="43079" i_stop="42237" i_length="843"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="42236" e_stop="42039" e_length="198"/>
          </exon>
          <intron i_serial="2" don_prob="0.716" acc_prob="0.765">
            <gDNA_intron_boundary i_start="42038" i_stop="41947" i_length="92"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="41946" e_stop="41887" e_length="60"/>
          </exon>
          <intron i_serial="3" don_prob="0.518" acc_prob="0.714">
            <gDNA_intron_boundary i_start="41886" i_stop="41441" i_length="446"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="41440" e_stop="41345" e_length="96"/>
          </exon>
          <intron i_serial="4" don_prob="0.987" acc_prob="0.999">
            <gDNA_intron_boundary i_start="41344" i_stop="41241" i_length="104"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="41240" e_stop="41216" e_length="25"/>
          </exon>
          <intron i_serial="5" don_prob="0.990" acc_prob="0.947">
            <gDNA_intron_boundary i_start="41215" i_stop="41040" i_length="176"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="41039" e_stop="40945" e_length="95"/>
          </exon>
          <intron i_serial="6" don_prob="0.990" acc_prob="0.999">
            <gDNA_intron_boundary i_start="40944" i_stop="39248" i_length="1697"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="39247" e_stop="39062" e_length="186"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43333" stop="43080"/>
              <exon start="42236" stop="42039"/>
              <exon start="41946" stop="41887"/>
              <exon start="41440" stop="41345"/>
              <exon start="41240" stop="41216"/>
              <exon start="41039" stop="40945"/>
              <exon start="39247" stop="39062"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U573965" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GTTCTTGTTTGAGCGACGATACTTGGTTCGCTCTTTCTCAAATGCGTACCACCACCACCTTACAGGTCGAAGATCCACAAATAATCGGACCCAATTCCCCCGGCATGCCCGAGTACTGTTTAGAAAAAGTTTTCCCCGTTTACGCGGTTGGCGTTTCCGAACCCGACCCGAACTTGATCGTCTCTGTCGCTAACACCGCTTCTACTCTTGGTGACCCTATTTGGGATGCTGTAAAGCTTGAAGCAAAGCTTGAG : GCAGAGAAGGAGCCAATATTAAGCAGCTTCTTGTACGCAAGTATTTTGACTCATGATTGTTTGGAACGGGCATTGAGCTTTGTTCTTTCCAACCGTCTGCAAAATCCTACACTTTTGGCAACTCAATTAATGGACATATTCTCTGATGTAATAATGCACAATCGGTGCATCCAATGCTCTATTCGACTTGATTTACAG : GCATGTAAAGATAGAGATCCTTCATGTTTGTCATACTGTTCTGCTCTTTTGTACCTTAAG : GGTTATCATGCTTTACAAACACATCGAGTTGCACATACGCTATGGAATCAAGGGCGCAAAGTCTTGGCATTGGCGTTACAAAGTCGAGTTAGTGAG : GTTTTTGGAGTTGATATACATCCAG : CTGCCCAAATTGGAGAGGGAATTCTTCTGGATCATGCCACTGGTGTTGTAATTGGTGAAACTGCTGTCATAGGGAATAGAGTTTCACTTATGCAG : GGCGTAACCTTGGGAGGTACTGGGAAAGAGATTGGTGATAGGCATCCCAAAATAGGTCAAGGTGCACTGATTGGAGCTAGTGCAACTATACTTGGAAATATAGAAATAGGGGAAGGTGCAATGGTTGGTGCTGGTTCCCTTGTGATGAAGGATGTTCCTCCCCACAGGTTGAGTATTATATATTTA</gDNA_template>
            <first_frame> V  L  V  *  A  T  I  L  G  S  L  F  L  K  C  V  P  P  P  P  Y  R  S  K  I  H  K  *  S  D  P  I  P  P  A  C  P  S  T  V  *  K  K  F  S  P  F  T  R  L  A  F  P  N  P  T  R  T  *  S  S  L  S  L  T  P  L  L  L  L  V  T  L  F  G  M  L  *  S  L  K  Q  S  L  R :   Q  R  R  S  Q  Y  *  A  A  S  C  T  Q  V  F  *  L  M  I  V  W  N  G  H  *  A  L  F  F  P  T  V  C  K  I  L  H  F  W  Q  L  N  *  W  T  Y  S  L  M  *  *  C  T  I  G  A  S  N  A  L  F  D  L  I  Y  R :   H  V  K  I  E  I  L  H  V  C  H  T  V  L  L  F  C  T  L  R :   V  I  M  L  Y  K  H  I  E  L  H  I  R  Y  G  I  K  G  A  K  S  W  H  W  R  Y  K  V  E  L  V  R :   F  L  E  L  I  Y  I  Q  :  L  P  K  L  E  R  E  F  F  W  I  M  P  L  V  L  *  L  V  K  L  L  S  *  G  I  E  F  H  L  C  R :   A  *  P  W  E  V  L  G  K  R  L  V  I  G  I  P  K  *  V  K  V  H  *  L  E  L  V  Q  L  Y  L  E  I  *  K  *  G  K  V  Q  W  L  V  L  V  P  L  *  *  R  M  F  L  P  T  G  *  V  L  Y  I   </first_frame>
            <second_frame>  F  L  F  E  R  R  Y  L  V  R  S  F  S  N  A  Y  H  H  H  L  T  G  R  R  S  T  N  N  R  T  Q  F  P  R  H  A  R  V  L  F  R  K  S  F  P  R  L  R  G  W  R  F  R  T  R  P  E  L  D  R  L  C  R  *  H  R  F  Y  S  W  *  P  Y  L  G  C  C  K  A  *  S  K  A  *   : G  R  E  G  A  N  I  K  Q  L  L  V  R  K  Y  F  D  S  *  L  F  G  T  G  I  E  L  C  S  F  Q  P  S  A  K  S  Y  T  F  G  N  S  I  N  G  H  I  L  *  C  N  N  A  Q  S  V  H  P  M  L  Y  S  T  *  F  T   : G  M  *  R  *  R  S  F  M  F  V  I  L  F  C  S  F  V  P  *   : G  L  S  C  F  T  N  T  S  S  C  T  Y  A  M  E  S  R  A  Q  S  L  G  I  G  V  T  K  S  S  *  *   : G  F  W  S  *  Y  T  S  S :   C  P  N  W  R  G  N  S  S  G  S  C  H  W  C  C  N  W  *  N  C  C  H  R  E  *  S  F  T  Y  A   : G  R  N  L  G  R  Y  W  E  R  D  W  *  *  A  S  Q  N  R  S  R  C  T  D  W  S  *  C  N  Y  T  W  K  Y  R  N  R  G  R  C  N  G  W  C  W  F  P  C  D  E  G  C  S  S  P  Q  V  E  Y  Y  I  F  </second_frame>
            <third_frame>   S  C  L  S  D  D  T  W  F  A  L  S  Q  M  R  T  T  T  T  L  Q  V  E  D  P  Q  I  I  G  P  N  S  P  G  M  P  E  Y  C  L  E  K  V  F  P  V  Y  A  V  G  V  S  E  P  D  P  N  L  I  V  S  V  A  N  T  A  S  T  L  G  D  P  I  W  D  A  V  K  L  E  A  K  L  E  :  A  E  K  E  P  I  L  S  S  F  L  Y  A  S  I  L  T  H  D  C  L  E  R  A  L  S  F  V  L  S  N  R  L  Q  N  P  T  L  L  A  T  Q  L  M  D  I  F  S  D  V  I  M  H  N  R  C  I  Q  C  S  I  R  L  D  L  Q  :  A  C  K  D  R  D  P  S  C  L  S  Y  C  S  A  L  L  Y  L  K  :  G  Y  H  A  L  Q  T  H  R  V  A  H  T  L  W  N  Q  G  R  K  V  L  A  L  A  L  Q  S  R  V  S  E  :  V  F  G  V  D  I  H  P   : A  A  Q  I  G  E  G  I  L  L  D  H  A  T  G  V  V  I  G  E  T  A  V  I  G  N  R  V  S  L  M  Q  :  G  V  T  L  G  G  T  G  K  E  I  G  D  R  H  P  K  I  G  Q  G  A  L  I  G  A  S  A  T  I  L  G  N  I  E  I  G  E  G  A  M  V  G  A  G  S  L  V  M  K  D  V  P  P  H  R  L  S  I  I  Y  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0031D11.1" strand="-"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="43331" stop="43080"/>
                    <exon start="42236" stop="42039"/>
                    <exon start="41946" stop="41887"/>
                    <exon start="41440" stop="41345"/>
                    <exon start="41240" stop="41216"/>
                    <exon start="41039" stop="40945"/>
                    <exon start="39247" stop="39062"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>912</number_coding_nucleotides>
                  <number_encoded_amino_acids>304</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SCLSDDTWFALSQMRTTTTLQVEDPQIIGPNSPGMPEYCLEKVFPVYAVGVSEPDPNLIVSVANTASTLGDPIWDAVKLEAKLEAEKEPILSSFLYASILTHDCLERALSFVLSNRLQNPTLLATQLMDIFSDVIMHNRCIQCSIRLDLQACKDRDPSCLSYCSALLYLKGYHALQTHRVAHTLWNQGRKVLALALQSRVSEVFGVDIHPAAQIGEGILLDHATGVVIGETAVIGNRVSLMQGVTLGGTGKEIGDRHPKIGQGALIGASATILGNIEIGEGAMVGAGSLVMKDVPPHRLSIIYL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="+" PGL_start="54931" PGL_stop="60663"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="54931" e_stop="55597"/>
            <exon e_start="56764" e_stop="57003"/>
            <exon e_start="58415" e_stop="58493"/>
            <exon e_start="60250" e_stop="60663"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.947" e_score="0.999"/>
          <exon-intron don_prob="0.903" acc_prob="0.963" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.978" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.999">
            <gDNA_exon_boundary e_start="54931" e_stop="55597" e_length="667"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.947">
            <gDNA_intron_boundary i_start="55598" i_stop="56763" i_length="1166"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="56764" e_stop="57003" e_length="240"/>
          </exon>
          <intron i_serial="2" don_prob="0.903" acc_prob="0.963">
            <gDNA_intron_boundary i_start="57004" i_stop="58414" i_length="1411"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="58415" e_stop="58493" e_length="79"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="0.978">
            <gDNA_intron_boundary i_start="58494" i_stop="60249" i_length="1756"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="60250" e_stop="60663" e_length="414"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54931" stop="55597"/>
              <exon start="56764" stop="57003"/>
              <exon start="58415" stop="58493"/>
              <exon start="60250" stop="60663"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U567746" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54952" stop="55128"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U594054" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGAGTACATGAGGTGGTGTTTGGTCAGATGGACCGGCTATTCTTCAGCGGTTCACGCAAAATGTGGCGCGCATTGCTACCGCTCTCTCCACTTCCTTTTTTCCTTCGACTTTCTTCACTGCCCTTTCATGGCGACTTAAAGTCATTCGCAATCTGAAGAATTCAAGACAAATCAAAATCAAATAGCTATGGCTCGGAAATCCTTTCCGATCCTAAAACAACTCATCCAACAATCGACCAATCGTTGTTTTACCTCTACCGTCTCGCCGCGAGCCGTCACGCTGATTCCAGGCGATGGCGTTGGTCCACTGGTAACCGATTCAGTCGAACAGGTGATGAAGGCGATGAAGGCACCTGTTTACTTTGAGCGATACGAAGTGCGTGGTGATATGAAGTGTATGCCGGAGGAAGTAATTGATTCGATTAAGAAGAATAAGGTTTGTCTGAAAGGAGGGCTAAGGACTCCGGTTGGCGGAGGTGTTAGTTCGCTAAATGTGCAAATGAGGAAAGAGCTTGATTTGTACGCTTCCATTGTGCATTGTTTTACTCTGCCAGGGTTGCCTACGCGGCATGAGGATGTGGATATTGTTGTGATTAGGGAGAATACTGAGGGAGAGTATGCTGGCCTTGAGCATGAGGTTGTTCCTGGTGTCGTTGAGAGCCTTAAG : GTGATAACAAAATATTGCTCAGAACGAATAGCAAAATTTGCGTTTGAGTATGCTCATGTGAACAAAAGAAAGAAGGTCACAGCTGTGCACAAAGCCAACATTATGAAACTTGCAGATGGTCTATTCTTAGAATCCTGTAGGGAAGTTGCAGCTAAATATCCAGAAATACAGTATGAGGAGATTATTGTGGATAATTGCTGCATGCAACTTGTCTCAAGGCCAGAGCAATTTGATGTCATG : GTGACTCCCAACCTCTATGGAAATTTGATTGCAAATACGGCTGCTGGCATAGCTGGTGGCACAGGAGTCATGCCAGGAG : GTAATGTTGGCGCTGATCAAGCAGTTTTTGAGCAAGGTGCTTCCGCTGGGAATGTCGGCAATGAAAAGATATTGAAGCTTAAGAGAGCAAATCCAGTGGCGCTTCTTCTGTCGTCAGCAATGATGCTGAGACATCTTGAATTTCCGTCATATGCTGATCGTTTAGAAACTGCTGTAAGACATGTAATAGAAGAGGGAAAATTCAGGACAAAGGATGTTGGAGGGGATAGCTCTACTCAAGAAGTTGTTGATGCAATTATAGCTGCTTTAGACTAATCGGAATTGACAGTCGTCAAGTTTTTAGGAGAATTATTCACTGTCCAGAGATCTACTTGGCCTATTTTTTGCACAGCTGCAATTTTGTTTTAACTTTCTGAGAATATTTGCTGCTACAATTCTAAATTATCTTTTTTTC</gDNA_template>
            <first_frame> *  V  H  E  V  V  F  G  Q  M  D  R  L  F  F  S  G  S  R  K  M  W  R  A  L  L  P  L  S  P  L  P  F  F  L  R  L  S  S  L  P  F  H  G  D  L  K  S  F  A  I  *  R  I  Q  D  K  S  K  S  N  S  Y  G  S  E  I  L  S  D  P  K  T  T  H  P  T  I  D  Q  S  L  F  Y  L  Y  R  L  A  A  S  R  H  A  D  S  R  R  W  R  W  S  T  G  N  R  F  S  R  T  G  D  E  G  D  E  G  T  C  L  L  *  A  I  R  S  A  W  *  Y  E  V  Y  A  G  G  S  N  *  F  D  *  E  E  *  G  L  S  E  R  R  A  K  D  S  G  W  R  R  C  *  F  A  K  C  A  N  E  E  R  A  *  F  V  R  F  H  C  A  L  F  Y  S  A  R  V  A  Y  A  A  *  G  C  G  Y  C  C  D  *  G  E  Y  *  G  R  V  C  W  P  *  A  *  G  C  S  W  C  R  *  E  P  *   : G  D  N  K  I  L  L  R  T  N  S  K  I  C  V  *  V  C  S  C  E  Q  K  K  E  G  H  S  C  A  Q  S  Q  H  Y  E  T  C  R  W  S  I  L  R  I  L  *  G  S  C  S  *  I  S  R  N  T  V  *  G  D  Y  C  G  *  L  L  H  A  T  C  L  K  A  R  A  I  *  C  H   : G  D  S  Q  P  L  W  K  F  D  C  K  Y  G  C  W  H  S  W  W  H  R  S  H  A  R  R :   *  C  W  R  *  S  S  S  F  *  A  R  C  F  R  W  E  C  R  Q  *  K  D  I  E  A  *  E  S  K  S  S  G  A  S  S  V  V  S  N  D  A  E  T  S  *  I  S  V  I  C  *  S  F  R  N  C  C  K  T  C  N  R  R  G  K  I  Q  D  K  G  C  W  R  G  *  L  Y  S  R  S  C  *  C  N  Y  S  C  F  R  L  I  G  I  D  S  R  Q  V  F  R  R  I  I  H  C  P  E  I  Y  L  A  Y  F  L  H  S  C  N  F  V  L  T  F  *  E  Y  L  L  L  Q  F  *  I  I  F  F   </first_frame>
            <second_frame>  E  Y  M  R  W  C  L  V  R  W  T  G  Y  S  S  A  V  H  A  K  C  G  A  H  C  Y  R  S  L  H  F  L  F  S  F  D  F  L  H  C  P  F  M  A  T  *  S  H  S  Q  S  E  E  F  K  T  N  Q  N  Q  I  A  M  A  R  K  S  F  P  I  L  K  Q  L  I  Q  Q  S  T  N  R  C  F  T  S  T  V  S  P  R  A  V  T  L  I  P  G  D  G  V  G  P  L  V  T  D  S  V  E  Q  V  M  K  A  M  K  A  P  V  Y  F  E  R  Y  E  V  R  G  D  M  K  C  M  P  E  E  V  I  D  S  I  K  K  N  K  V  C  L  K  G  G  L  R  T  P  V  G  G  G  V  S  S  L  N  V  Q  M  R  K  E  L  D  L  Y  A  S  I  V  H  C  F  T  L  P  G  L  P  T  R  H  E  D  V  D  I  V  V  I  R  E  N  T  E  G  E  Y  A  G  L  E  H  E  V  V  P  G  V  V  E  S  L  K  :  V  I  T  K  Y  C  S  E  R  I  A  K  F  A  F  E  Y  A  H  V  N  K  R  K  K  V  T  A  V  H  K  A  N  I  M  K  L  A  D  G  L  F  L  E  S  C  R  E  V  A  A  K  Y  P  E  I  Q  Y  E  E  I  I  V  D  N  C  C  M  Q  L  V  S  R  P  E  Q  F  D  V  M  :  V  T  P  N  L  Y  G  N  L  I  A  N  T  A  A  G  I  A  G  G  T  G  V  M  P  G   : G  N  V  G  A  D  Q  A  V  F  E  Q  G  A  S  A  G  N  V  G  N  E  K  I  L  K  L  K  R  A  N  P  V  A  L  L  L  S  S  A  M  M  L  R  H  L  E  F  P  S  Y  A  D  R  L  E  T  A  V  R  H  V  I  E  E  G  K  F  R  T  K  D  V  G  G  D  S  S  T  Q  E  V  V  D  A  I  I  A  A  L  D  *  S  E  L  T  V  V  K  F  L  G  E  L  F  T  V  Q  R  S  T  W  P  I  F  C  T  A  A  I  L  F  *  L  S  E  N  I  C  C  Y  N  S  K  L  S  F  F  </second_frame>
            <third_frame>   S  T  *  G  G  V  W  S  D  G  P  A  I  L  Q  R  F  T  Q  N  V  A  R  I  A  T  A  L  S  T  S  F  F  P  S  T  F  F  T  A  L  S  W  R  L  K  V  I  R  N  L  K  N  S  R  Q  I  K  I  K  *  L  W  L  G  N  P  F  R  S  *  N  N  S  S  N  N  R  P  I  V  V  L  P  L  P  S  R  R  E  P  S  R  *  F  Q  A  M  A  L  V  H  W  *  P  I  Q  S  N  R  *  *  R  R  *  R  H  L  F  T  L  S  D  T  K  C  V  V  I  *  S  V  C  R  R  K  *  L  I  R  L  R  R  I  R  F  V  *  K  E  G  *  G  L  R  L  A  E  V  L  V  R  *  M  C  K  *  G  K  S  L  I  C  T  L  P  L  C  I  V  L  L  C  Q  G  C  L  R  G  M  R  M  W  I  L  L  *  L  G  R  I  L  R  E  S  M  L  A  L  S  M  R  L  F  L  V  S  L  R  A  L  R :   *  *  Q  N  I  A  Q  N  E  *  Q  N  L  R  L  S  M  L  M  *  T  K  E  R  R  S  Q  L  C  T  K  P  T  L  *  N  L  Q  M  V  Y  S  *  N  P  V  G  K  L  Q  L  N  I  Q  K  Y  S  M  R  R  L  L  W  I  I  A  A  C  N  L  S  Q  G  Q  S  N  L  M  S  W :   *  L  P  T  S  M  E  I  *  L  Q  I  R  L  L  A  *  L  V  A  Q  E  S  C  Q  E  :  V  M  L  A  L  I  K  Q  F  L  S  K  V  L  P  L  G  M  S  A  M  K  R  Y  *  S  L  R  E  Q  I  Q  W  R  F  F  C  R  Q  Q  *  C  *  D  I  L  N  F  R  H  M  L  I  V  *  K  L  L  *  D  M  *  *  K  R  E  N  S  G  Q  R  M  L  E  G  I  A  L  L  K  K  L  L  M  Q  L  *  L  L  *  T  N  R  N  *  Q  S  S  S  F  *  E  N  Y  S  L  S  R  D  L  L  G  L  F  F  A  Q  L  Q  F  C  F  N  F  L  R  I  F  A  A  T  I  L  N  Y  L  F  F </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0031D11.1" strand="+"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="55070" stop="55597"/>
                    <exon start="56764" stop="57003"/>
                    <exon start="58415" stop="58493"/>
                    <exon start="60250" stop="60524"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1119</number_coding_nucleotides>
                  <number_encoded_amino_acids>373</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SHSQSEEFKTNQNQIAMARKSFPILKQLIQQSTNRCFTSTVSPRAVTLIPGDGVGPLVTDSVEQVMKAMKAPVYFERYEVRGDMKCMPEEVIDSIKKNKVCLKGGLRTPVGGGVSSLNVQMRKELDLYASIVHCFTLPGLPTRHEDVDIVVIRENTEGEYAGLEHEVVPGVVESLKVITKYCSERIAKFAFEYAHVNKRKKVTAVHKANIMKLADGLFLESCREVAAKYPEIQYEEIIVDNCCMQLVSRPEQFDVMVTPNLYGNLIANTAAGIAGGTGVMPGGNVGADQAVFEQGASAGNVGNEKILKLKRANPVALLLSSAMMLRHLEFPSYADRLETAVRHVIEEGKFRTKDVGGDSSTQEVVDAIIAALD*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="+" PGL_start="64545" PGL_stop="65378"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="64545" e_stop="65378"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.999"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.999">
            <gDNA_exon_boundary e_start="64545" e_stop="65378" e_length="834"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64545" stop="65378"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U601102" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CGAGTACATCACTTATATGGACTAACAGAGACATATGGTCCAGGTACATATAATTTGTGGAGGCCTGAGTGGGATTCTTTACCACCAAACGAAAAGTACAAACTGAAAGCAAGACAAGGGGTGCAACATCTTTGTTCAGAGGCAGTGGATGTGATGGACCCTCTTACAATGGAGAAAGTACCAGAAGATGGTAAAACAATAGGTGAAATTATGTTTAGAGGGAATACAGTAATGAGTGAATATCTGAAAGATGAAGAAGCAACAAAAGAAGCTTTTAAAGGTGGATGGTTTCATAGTGGTGATTTGGCTGTGAAACATCCAGACGGATACATAGAAGTTAAGGACAGATTGAAAGATATCGTAATCTCTGGTGGAGAAAACATAAGCACAATAGAGGTGGAAAGAGTTTTGTATAGTCATCCAGCAGTTTTTGAAACAGCAGTGGTTGCGCGACCAGATAATCACTGGGGGCAAACACCTTGTGCATTTGTGAAGTTGAAGGATGGTTCAAATGTTAGTGAGCAAGAAATTATCAACTTCTGCAGGGATAACTTGCCTCATTACATGGCACCTCGAACAGTCATATTTCAACATCTCCCTAAAACTTCAACAGGCAAAATACAAAAATTCATTCTAAGAGAGAAAGCCAGAGCCTTGGGAAGTCTTTGCTGAAGGAAATCCGTTTTTCTTGCTGTCCGATTCTCTTTCTTCTAATTTTCTACAACTGAAAGACTTCTATCTATGCTGTAATCTGTTTTTCTTACCTTTTAAAGATTGAAGTCTCCTCAAAAGGTGTATGCTAATGATCTCTATGTTGTACAAGCTGGACATGGT</gDNA_template>
            <first_frame> R  V  H  H  L  Y  G  L  T  E  T  Y  G  P  G  T  Y  N  L  W  R  P  E  W  D  S  L  P  P  N  E  K  Y  K  L  K  A  R  Q  G  V  Q  H  L  C  S  E  A  V  D  V  M  D  P  L  T  M  E  K  V  P  E  D  G  K  T  I  G  E  I  M  F  R  G  N  T  V  M  S  E  Y  L  K  D  E  E  A  T  K  E  A  F  K  G  G  W  F  H  S  G  D  L  A  V  K  H  P  D  G  Y  I  E  V  K  D  R  L  K  D  I  V  I  S  G  G  E  N  I  S  T  I  E  V  E  R  V  L  Y  S  H  P  A  V  F  E  T  A  V  V  A  R  P  D  N  H  W  G  Q  T  P  C  A  F  V  K  L  K  D  G  S  N  V  S  E  Q  E  I  I  N  F  C  R  D  N  L  P  H  Y  M  A  P  R  T  V  I  F  Q  H  L  P  K  T  S  T  G  K  I  Q  K  F  I  L  R  E  K  A  R  A  L  G  S  L  C  *  R  K  S  V  F  L  A  V  R  F  S  F  F  *  F  S  T  T  E  R  L  L  S  M  L  *  S  V  F  L  T  F  *  R  L  K  S  P  Q  K  V  Y  A  N  D  L  Y  V  V  Q  A  G  H  G </first_frame>
            <second_frame>  E  Y  I  T  Y  M  D  *  Q  R  H  M  V  Q  V  H  I  I  C  G  G  L  S  G  I  L  Y  H  Q  T  K  S  T  N  *  K  Q  D  K  G  C  N  I  F  V  Q  R  Q  W  M  *  W  T  L  L  Q  W  R  K  Y  Q  K  M  V  K  Q  *  V  K  L  C  L  E  G  I  Q  *  *  V  N  I  *  K  M  K  K  Q  Q  K  K  L  L  K  V  D  G  F  I  V  V  I  W  L  *  N  I  Q  T  D  T  *  K  L  R  T  D  *  K  I  S  *  S  L  V  E  K  T  *  A  Q  *  R  W  K  E  F  C  I  V  I  Q  Q  F  L  K  Q  Q  W  L  R  D  Q  I  I  T  G  G  K  H  L  V  H  L  *  S  *  R  M  V  Q  M  L  V  S  K  K  L  S  T  S  A  G  I  T  C  L  I  T  W  H  L  E  Q  S  Y  F  N  I  S  L  K  L  Q  Q  A  K  Y  K  N  S  F  *  E  R  K  P  E  P  W  E  V  F  A  E  G  N  P  F  F  L  L  S  D  S  L  S  S  N  F  L  Q  L  K  D  F  Y  L  C  C  N  L  F  F  L  P  F  K  D  *  S  L  L  K  R  C  M  L  M  I  S  M  L  Y  K  L  D  M   </second_frame>
            <third_frame>   S  T  S  L  I  W  T  N  R  D  I  W  S  R  Y  I  *  F  V  E  A  *  V  G  F  F  T  T  K  R  K  V  Q  T  E  S  K  T  R  G  A  T  S  L  F  R  G  S  G  C  D  G  P  S  Y  N  G  E  S  T  R  R  W  *  N  N  R  *  N  Y  V  *  R  E  Y  S  N  E  *  I  S  E  R  *  R  S  N  K  R  S  F  *  R  W  M  V  S  *  W  *  F  G  C  E  T  S  R  R  I  H  R  S  *  G  Q  I  E  R  Y  R  N  L  W  W  R  K  H  K  H  N  R  G  G  K  S  F  V  *  S  S  S  S  F  *  N  S  S  G  C  A  T  R  *  S  L  G  A  N  T  L  C  I  C  E  V  E  G  W  F  K  C  *  *  A  R  N  Y  Q  L  L  Q  G  *  L  A  S  L  H  G  T  S  N  S  H  I  S  T  S  P  *  N  F  N  R  Q  N  T  K  I  H  S  K  R  E  S  Q  S  L  G  K  S  L  L  K  E  I  R  F  S  C  C  P  I  L  F  L  L  I  F  Y  N  *  K  T  S  I  Y  A  V  I  C  F  S  Y  L  L  K  I  E  V  S  S  K  G  V  C  *  *  S  L  C  C  T  S  W  T  W  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0031D11.1" strand="+"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="64545" stop="65216"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>669</number_coding_nucleotides>
                  <number_encoded_amino_acids>223</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RVHHLYGLTETYGPGTYNLWRPEWDSLPPNEKYKLKARQGVQHLCSEAVDVMDPLTMEKVPEDGKTIGEIMFRGNTVMSEYLKDEEATKEAFKGGWFHSGDLAVKHPDGYIEVKDRLKDIVISGGENISTIEVERVLYSHPAVFETAVVARPDNHWGQTPCAFVKLKDGSNVSEQEIINFCRDNLPHYMAPRTVIFQHLPKTSTGKIQKFILREKARALGSLC*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="+" PGL_start="70757" PGL_stop="71513"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="70757" e_stop="71103"/>
            <exon e_start="71276" e_stop="71469"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.929" acc_prob="1.000" e_score="0.997"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.997">
            <gDNA_exon_boundary e_start="70757" e_stop="71103" e_length="347"/>
          </exon>
          <intron i_serial="1" don_prob="0.929" acc_prob="1.000">
            <gDNA_intron_boundary i_start="71104" i_stop="71275" i_length="172"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="71276" e_stop="71469" e_length="194"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70757" stop="71103"/>
              <exon start="71276" stop="71469"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U588041" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCATGAATCCTTTTTTCAATATTTCAAGATTGAATGGGTTGTTACATGCTCTAAACAGAGTTCGAGTTCACCCCATTTTGAGTCAGAGGTCTCGTTATTTGTCCCAAATTATTCATGAGAATGTTGAAACTCACCCATGGGAATCCATGGAGGGACTAATGAGGTGTTCAGCTAATTATTTCCCTTTAACACCCATTAGTTTCTTGGACAGAGCTGCTAAGGTTTTTAGAGACAGGACTTCTGTTGTGTATGGTTCTTCTGTTAAATTCACTTGGGAAGAGACTCATAATAGATGTCTAAAGATGGCTTCTGCTCTGTCTCAGTTGGGTATTTCTCGTGGTGATGTT : GTTGCAACGCTGGCTCCTAATGTACCCGCAGTGCAAGAGTTGCATTTTGCGGTTCCAATGGCAGGAGCAGTGCTTTGTACGTTGAATACACGTCATGATTCAGCTATGGTATCTGTTCTCCTGAGGCATTCAGAAGCTAAGATCATTTTCGTTGACCAGCAGTTGTTTGATGTTGCTCAAGGAGCACTGGATCT</gDNA_template>
            <first_frame> S  *  I  L  F  S  I  F  Q  D  *  M  G  C  Y  M  L  *  T  E  F  E  F  T  P  F  *  V  R  G  L  V  I  C  P  K  L  F  M  R  M  L  K  L  T  H  G  N  P  W  R  D  *  *  G  V  Q  L  I  I  S  L  *  H  P  L  V  S  W  T  E  L  L  R  F  L  E  T  G  L  L  L  C  M  V  L  L  L  N  S  L  G  K  R  L  I  I  D  V  *  R  W  L  L  L  C  L  S  W  V  F  L  V  V  M  L :   L  Q  R  W  L  L  M  Y  P  Q  C  K  S  C  I  L  R  F  Q  W  Q  E  Q  C  F  V  R  *  I  H  V  M  I  Q  L  W  Y  L  F  S  *  G  I  Q  K  L  R  S  F  S  L  T  S  S  C  L  M  L  L  K  E  H  W  I  </first_frame>
            <second_frame>  H  E  S  F  F  Q  Y  F  K  I  E  W  V  V  T  C  S  K  Q  S  S  S  S  P  H  F  E  S  E  V  S  L  F  V  P  N  Y  S  *  E  C  *  N  S  P  M  G  I  H  G  G  T  N  E  V  F  S  *  L  F  P  F  N  T  H  *  F  L  G  Q  S  C  *  G  F  *  R  Q  D  F  C  C  V  W  F  F  C  *  I  H  L  G  R  D  S  *  *  M  S  K  D  G  F  C  S  V  S  V  G  Y  F  S  W  *  C   : C  C  N  A  G  S  *  C  T  R  S  A  R  V  A  F  C  G  S  N  G  R  S  S  A  L  Y  V  E  Y  T  S  *  F  S  Y  G  I  C  S  P  E  A  F  R  S  *  D  H  F  R  *  P  A  V  V  *  C  C  S  R  S  T  G  S </second_frame>
            <third_frame>   M  N  P  F  F  N  I  S  R  L  N  G  L  L  H  A  L  N  R  V  R  V  H  P  I  L  S  Q  R  S  R  Y  L  S  Q  I  I  H  E  N  V  E  T  H  P  W  E  S  M  E  G  L  M  R  C  S  A  N  Y  F  P  L  T  P  I  S  F  L  D  R  A  A  K  V  F  R  D  R  T  S  V  V  Y  G  S  S  V  K  F  T  W  E  E  T  H  N  R  C  L  K  M  A  S  A  L  S  Q  L  G  I  S  R  G  D  V  :  V  A  T  L  A  P  N  V  P  A  V  Q  E  L  H  F  A  V  P  M  A  G  A  V  L  C  T  L  N  T  R  H  D  S  A  M  V  S  V  L  L  R  H  S  E  A  K  I  I  F  V  D  Q  Q  L  F  D  V  A  Q  G  A  L  D   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0031D11.1" strand="+"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="70759" stop="71103"/>
                    <exon start="71276" stop="71467"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>537</number_coding_nucleotides>
                  <number_encoded_amino_acids>179</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>MNPFFNISRLNGLLHALNRVRVHPILSQRSRYLSQIIHENVETHPWESMEGLMRCSANYFPLTPISFLDRAAKVFRDRTSVVYGSSVKFTWEETHNRCLKMASALSQLGISRGDVVATLAPNVPAVQELHFAVPMAGAVLCTLNTRHDSAMVSVLLRHSEAKIIFVDQQLFDVAQGALD</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="70998" e_stop="71513"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.996">
            <gDNA_exon_boundary e_start="70998" e_stop="71513" e_length="516"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70998" stop="71513"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U588040" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGTTGTGTATGGTTCTTCTGTTAAATTCACTTGGGAAGAGACTCATAATAGATGTCTAAAGATGGCTTCTGCTCTGTCTCAGTTGGGTATTTCTCGTGGTGATGTTGTAAGTTCGATTTCTCCGCTTTAGAATATTACGTCTAAATGAATGGTTAATAGTATATGGCTAAACTTTTTCATCTTTGGAATAAACTTCTACTAACATTTTAGTTTGATCACATATGAAAAGTTTTTAAATCTGTGATGTCTCATGGTTGTTAGTGTAAATGCTTGAATAGGTTGCAACGCTGGCTCCTAATGTACCCGCAGTGCAAGAGTTGCATTTTGCGGTTCCAATGGCAGGAGCAGTGCTTTGTACGTTGAATACACGTCATGATTCAGCTATGGTATCTGTTCTCCTGAGGCATTCAGAAGCTAAGATCATTTTCGTTGACCAGCAGTTGTTTGATGTTGCTCAAGGAGCACTGGATCTTCTTGCAGATGCTAAAACAAAACCTCTTCTAATATTAATCCCTG</gDNA_template>
            <first_frame> C  C  V  W  F  F  C  *  I  H  L  G  R  D  S  *  *  M  S  K  D  G  F  C  S  V  S  V  G  Y  F  S  W  *  C  C  K  F  D  F  S  A  L  E  Y  Y  V  *  M  N  G  *  *  Y  M  A  K  L  F  H  L  W  N  K  L  L  L  T  F  *  F  D  H  I  *  K  V  F  K  S  V  M  S  H  G  C  *  C  K  C  L  N  R  L  Q  R  W  L  L  M  Y  P  Q  C  K  S  C  I  L  R  F  Q  W  Q  E  Q  C  F  V  R  *  I  H  V  M  I  Q  L  W  Y  L  F  S  *  G  I  Q  K  L  R  S  F  S  L  T  S  S  C  L  M  L  L  K  E  H  W  I  F  L  Q  M  L  K  Q  N  L  F  *  Y  *  S  L </first_frame>
            <second_frame>  V  V  Y  G  S  S  V  K  F  T  W  E  E  T  H  N  R  C  L  K  M  A  S  A  L  S  Q  L  G  I  S  R  G  D  V  V  S  S  I  S  P  L  *  N  I  T  S  K  *  M  V  N  S  I  W  L  N  F  F  I  F  G  I  N  F  Y  *  H  F  S  L  I  T  Y  E  K  F  L  N  L  *  C  L  M  V  V  S  V  N  A  *  I  G  C  N  A  G  S  *  C  T  R  S  A  R  V  A  F  C  G  S  N  G  R  S  S  A  L  Y  V  E  Y  T  S  *  F  S  Y  G  I  C  S  P  E  A  F  R  S  *  D  H  F  R  *  P  A  V  V  *  C  C  S  R  S  T  G  S  S  C  R  C  *  N  K  T  S  S  N  I  N  P   </second_frame>
            <third_frame>   L  C  M  V  L  L  L  N  S  L  G  K  R  L  I  I  D  V  *  R  W  L  L  L  C  L  S  W  V  F  L  V  V  M  L  *  V  R  F  L  R  F  R  I  L  R  L  N  E  W  L  I  V  Y  G  *  T  F  S  S  L  E  *  T  S  T  N  I  L  V  *  S  H  M  K  S  F  *  I  C  D  V  S  W  L  L  V  *  M  L  E  *  V  A  T  L  A  P  N  V  P  A  V  Q  E  L  H  F  A  V  P  M  A  G  A  V  L  C  T  L  N  T  R  H  D  S  A  M  V  S  V  L  L  R  H  S  E  A  K  I  I  F  V  D  Q  Q  L  F  D  V  A  Q  G  A  L  D  L  L  A  D  A  K  T  K  P  L  L  I  L  I  P  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0031D11.1" strand="+"/>
                <serials PGL_serial="9" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="71276" stop="71512"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>237</number_coding_nucleotides>
                  <number_encoded_amino_acids>79</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VATLAPNVPAVQELHFAVPMAGAVLCTLNTRHDSAMVSVLLRHSEAKIIFVDQQLFDVAQGALDLLADAKTKPLLILIP</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="-" PGL_start="77861" PGL_stop="74275"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="77861" e_stop="77279"/>
            <exon e_start="75975" e_stop="75665"/>
            <exon e_start="75588" e_stop="75456"/>
            <exon e_start="75371" e_stop="75018"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.912" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.982" acc_prob="0.982" e_score="1.000"/>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="77861" e_stop="77279" e_length="583"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.912">
            <gDNA_intron_boundary i_start="77278" i_stop="75976" i_length="1303"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="75975" e_stop="75665" e_length="311"/>
          </exon>
          <intron i_serial="2" don_prob="0.996" acc_prob="0.996">
            <gDNA_intron_boundary i_start="75664" i_stop="75589" i_length="76"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="75588" e_stop="75456" e_length="133"/>
          </exon>
          <intron i_serial="3" don_prob="0.982" acc_prob="0.982">
            <gDNA_intron_boundary i_start="75455" i_stop="75372" i_length="84"/>
          </intron>
          <exon e_serial="4" e_score="0.997">
            <gDNA_exon_boundary e_start="75371" e_stop="75018" e_length="354"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="77861" stop="77279"/>
              <exon start="75975" stop="75665"/>
              <exon start="75588" stop="75456"/>
              <exon start="75371" stop="75018"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U578511" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="77810" stop="77477"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U592849" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATAGGAACCAAATTTTATTTTTTTGTTATGATAAGAATGGAAACAAAGAGGAATACGAGTCAACACATACCTTCTTCTTTGCTGACGATTTGTTATTATCTCAAATGTTAATCCTTCATCTGCTCTTCTATTCACACTAGCCCCAATTTCTTCTTCTTCTTCTACAATAACAACTGCAAATATGACTTCTCCCTCCATCTTTCTAAACCCTATTTTTATTTCACTAATAATACCCGTTATTCTAGGTACGGTTTTCTATCAACTCGATTCCTTCGACCCGGTTTCTTATCCGACCCATGTGCTCTCTACTGACCCGCCTATTGTTGCACCAAAGCGCAATAACCAGGTGCTCCGTGGCTCCGAAAACATCGGAGTTAACCAGCTATTAGCACCCGAAGACGTAGCCTACGATCCGGAATCGGGAGTTATATACACTGCGTGTGTTGATGGGTGGGTTAAAAAAGTGAAAGTCAACGAATCGGCGGCGGATTCCACGGTGGAGGATTGGGTTTTCACCGGTGGCAGACCTCTCGGGCTTGCTCTAGGACATCACGGCGAAGTTATCGTTGCAGATTCAGAAAAG : GGATTATTACTCAACGTTACTTCTGAGGGTGAAATTAAAGTGCTAACAGAGGAAGCTGAAGGCCTGAAATTGAAATTGGCAGACGCTGTAGACGTTGCAGAGGATGGAATTATATATTTCTCCGATGCTTCTTACAAATATAATATCGAACAATACATTTATGATTTTCTTGAAGGAAGACCCCATGGAAGATTGTTAAGTTATGATCCATCAACTAAACAGACTAAAACGCTACTTAGCAACCTGCATTTTGCTAATGGCGTTGCAGTCTCTCCAGATCAAAATTATGTTATCTTCTGTGAAACTCCTCT : GAGGAAATGCAAAAAGTATCATATAAAAGGCGAAAAAAAAGGATCCGTGGATATGTTTGTTGATAATTTACCTGGATTTCCTGACAACATTCGTTACGATGGTGAAGGGCATTATTGGATTGCATTTGCCTCG : GAAAACACATATTCATGGGACTTGACCCTAAAGTACCCATTCATCAGAAAGATAATGGCTATAATGGTGAAATATGTTGGACAACCAAAGACAGAGAAAAATGGTGGTGTTTTATCTGTTGATTTACAAGGAAATCCACTGGAACACTATTATGATGAGGATTTGACAATGGTGTCAAGTGGCATTAAGATTGGTGATCATTTGTACTGTGGCTCTGTTAAGTCTCCGTATATACTACGCCTCAATCTCAAACAATATCCTGCCGTTTAAACTTCATAAACAAAAATGTAAGTGTTTGATTTCAAAAAATAATGGGTGTATTTGTTAGTACAAGTATATTCGTTCAATTTTGCA</gDNA_template>
            <first_frame> I  G  T  K  F  Y  F  F  V  M  I  R  M  E  T  K  R  N  T  S  Q  H  I  P  S  S  L  L  T  I  C  Y  Y  L  K  C  *  S  F  I  C  S  S  I  H  T  S  P  N  F  F  F  F  F  Y  N  N  N  C  K  Y  D  F  S  L  H  L  S  K  P  Y  F  Y  F  T  N  N  T  R  Y  S  R  Y  G  F  L  S  T  R  F  L  R  P  G  F  L  S  D  P  C  A  L  Y  *  P  A  Y  C  C  T  K  A  Q  *  P  G  A  P  W  L  R  K  H  R  S  *  P  A  I  S  T  R  R  R  S  L  R  S  G  I  G  S  Y  I  H  C  V  C  *  W  V  G  *  K  S  E  S  Q  R  I  G  G  G  F  H  G  G  G  L  G  F  H  R  W  Q  T  S  R  A  C  S  R  T  S  R  R  S  Y  R  C  R  F  R  K   : G  I  I  T  Q  R  Y  F  *  G  *  N  *  S  A  N  R  G  S  *  R  P  E  I  E  I  G  R  R  C  R  R  C  R  G  W  N  Y  I  F  L  R  C  F  L  Q  I  *  Y  R  T  I  H  L  *  F  S  *  R  K  T  P  W  K  I  V  K  L  *  S  I  N  *  T  D  *  N  A  T  *  Q  P  A  F  C  *  W  R  C  S  L  S  R  S  K  L  C  Y  L  L  *  N  S  S  :  E  E  M  Q  K  V  S  Y  K  R  R  K  K  R  I  R  G  Y  V  C  *  *  F  T  W  I  S  *  Q  H  S  L  R  W  *  R  A  L  L  D  C  I  C  L   : G  K  H  I  F  M  G  L  D  P  K  V  P  I  H  Q  K  D  N  G  Y  N  G  E  I  C  W  T  T  K  D  R  E  K  W  W  C  F  I  C  *  F  T  R  K  S  T  G  T  L  L  *  *  G  F  D  N  G  V  K  W  H  *  D  W  *  S  F  V  L  W  L  C  *  V  S  V  Y  T  T  P  Q  S  Q  T  I  S  C  R  L  N  F  I  N  K  N  V  S  V  *  F  Q  K  I  M  G  V  F  V  S  T  S  I  F  V  Q  F  C  </first_frame>
            <second_frame>  *  E  P  N  F  I  F  L  L  *  *  E  W  K  Q  R  G  I  R  V  N  T  Y  L  L  L  C  *  R  F  V  I  I  S  N  V  N  P  S  S  A  L  L  F  T  L  A  P  I  S  S  S  S  S  T  I  T  T  A  N  M  T  S  P  S  I  F  L  N  P  I  F  I  S  L  I  I  P  V  I  L  G  T  V  F  Y  Q  L  D  S  F  D  P  V  S  Y  P  T  H  V  L  S  T  D  P  P  I  V  A  P  K  R  N  N  Q  V  L  R  G  S  E  N  I  G  V  N  Q  L  L  A  P  E  D  V  A  Y  D  P  E  S  G  V  I  Y  T  A  C  V  D  G  W  V  K  K  V  K  V  N  E  S  A  A  D  S  T  V  E  D  W  V  F  T  G  G  R  P  L  G  L  A  L  G  H  H  G  E  V  I  V  A  D  S  E  K  :  G  L  L  L  N  V  T  S  E  G  E  I  K  V  L  T  E  E  A  E  G  L  K  L  K  L  A  D  A  V  D  V  A  E  D  G  I  I  Y  F  S  D  A  S  Y  K  Y  N  I  E  Q  Y  I  Y  D  F  L  E  G  R  P  H  G  R  L  L  S  Y  D  P  S  T  K  Q  T  K  T  L  L  S  N  L  H  F  A  N  G  V  A  V  S  P  D  Q  N  Y  V  I  F  C  E  T  P  L :   R  K  C  K  K  Y  H  I  K  G  E  K  K  G  S  V  D  M  F  V  D  N  L  P  G  F  P  D  N  I  R  Y  D  G  E  G  H  Y  W  I  A  F  A  S  :  E  N  T  Y  S  W  D  L  T  L  K  Y  P  F  I  R  K  I  M  A  I  M  V  K  Y  V  G  Q  P  K  T  E  K  N  G  G  V  L  S  V  D  L  Q  G  N  P  L  E  H  Y  Y  D  E  D  L  T  M  V  S  S  G  I  K  I  G  D  H  L  Y  C  G  S  V  K  S  P  Y  I  L  R  L  N  L  K  Q  Y  P  A  V  *  T  S  *  T  K  M  *  V  F  D  F  K  K  *  W  V  Y  L  L  V  Q  V  Y  S  F  N  F  A </second_frame>
            <third_frame>   R  N  Q  I  L  F  F  C  Y  D  K  N  G  N  K  E  E  Y  E  S  T  H  T  F  F  F  A  D  D  L  L  L  S  Q  M  L  I  L  H  L  L  F  Y  S  H  *  P  Q  F  L  L  L  L  L  Q  *  Q  L  Q  I  *  L  L  P  P  S  F  *  T  L  F  L  F  H  *  *  Y  P  L  F  *  V  R  F  S  I  N  S  I  P  S  T  R  F  L  I  R  P  M  C  S  L  L  T  R  L  L  L  H  Q  S  A  I  T  R  C  S  V  A  P  K  T  S  E  L  T  S  Y  *  H  P  K  T  *  P  T  I  R  N  R  E  L  Y  T  L  R  V  L  M  G  G  L  K  K  *  K  S  T  N  R  R  R  I  P  R  W  R  I  G  F  S  P  V  A  D  L  S  G  L  L  *  D  I  T  A  K  L  S  L  Q  I  Q  K  R :   D  Y  Y  S  T  L  L  L  R  V  K  L  K  C  *  Q  R  K  L  K  A  *  N  *  N  W  Q  T  L  *  T  L  Q  R  M  E  L  Y  I  S  P  M  L  L  T  N  I  I  S  N  N  T  F  M  I  F  L  K  E  D  P  M  E  D  C  *  V  M  I  H  Q  L  N  R  L  K  R  Y  L  A  T  C  I  L  L  M  A  L  Q  S  L  Q  I  K  I  M  L  S  S  V  K  L  L   : *  G  N  A  K  S  I  I  *  K  A  K  K  K  D  P  W  I  C  L  L  I  I  Y  L  D  F  L  T  T  F  V  T  M  V  K  G  I  I  G  L  H  L  P  R :   K  T  H  I  H  G  T  *  P  *  S  T  H  S  S  E  R  *  W  L  *  W  *  N  M  L  D  N  Q  R  Q  R  K  M  V  V  F  Y  L  L  I  Y  K  E  I  H  W  N  T  I  M  M  R  I  *  Q  W  C  Q  V  A  L  R  L  V  I  I  C  T  V  A  L  L  S  L  R  I  Y  Y  A  S  I  S  N  N  I  L  P  F  K  L  H  K  Q  K  C  K  C  L  I  S  K  N  N  G  C  I  C  *  Y  K  Y  I  R  S  I  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0031D11.1" strand="-"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="77776" stop="77279"/>
                    <exon start="75975" stop="75665"/>
                    <exon start="75588" stop="75456"/>
                    <exon start="75371" stop="75102"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1209</number_coding_nucleotides>
                  <number_encoded_amino_acids>403</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RFVIISNVNPSSALLFTLAPISSSSSTITTANMTSPSIFLNPIFISLIIPVILGTVFYQLDSFDPVSYPTHVLSTDPPIVAPKRNNQVLRGSENIGVNQLLAPEDVAYDPESGVIYTACVDGWVKKVKVNESAADSTVEDWVFTGGRPLGLALGHHGEVIVADSEKGLLLNVTSEGEIKVLTEEAEGLKLKLADAVDVAEDGIIYFSDASYKYNIEQYIYDFLEGRPHGRLLSYDPSTKQTKTLLSNLHFANGVAVSPDQNYVIFCETPLRKCKKYHIKGEKKGSVDMFVDNLPGFPDNIRYDGEGHYWIAFASENTYSWDLTLKYPFIRKIMAIMVKYVGQPKTEKNGGVLSVDLQGNPLEHYYDEDLTMVSSGIKIGDHLYCGSVKSPYILRLNLKQYPAV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="75965" e_stop="75665"/>
            <exon e_start="75588" e_stop="75085"/>
            <exon e_start="75022" e_stop="74965"/>
            <exon e_start="74397" e_stop="74275"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.996" acc_prob="0.996" e_score="0.973"/>
          <exon-intron don_prob="0.933" acc_prob="0.000" e_score="0.966"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.603"/>
          <exon-only e_score="0.593"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.973">
            <gDNA_exon_boundary e_start="75965" e_stop="75665" e_length="301"/>
          </exon>
          <intron i_serial="1" don_prob="0.996" acc_prob="0.996">
            <gDNA_intron_boundary i_start="75664" i_stop="75589" i_length="76"/>
          </intron>
          <exon e_serial="2" e_score="0.966">
            <gDNA_exon_boundary e_start="75588" e_stop="75085" e_length="504"/>
          </exon>
          <intron i_serial="2" don_prob="0.933" acc_prob="0.000">
            <gDNA_intron_boundary i_start="75084" i_stop="75023" i_length="62"/>
          </intron>
          <exon e_serial="3" e_score="0.603">
            <gDNA_exon_boundary e_start="75022" e_stop="74965" e_length="58"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="74964" i_stop="74398" i_length="567"/>
          </intron>
          <exon e_serial="4" e_score="0.593">
            <gDNA_exon_boundary e_start="74397" e_stop="74275" e_length="123"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75965" stop="75665"/>
              <exon start="75588" stop="75085"/>
              <exon start="75022" stop="74965"/>
              <exon start="74397" stop="74275"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U579500" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCAACGTTACTTCTGAGGGTGAAATTAAAGTGCTAACAGAGGAAGCTGAAGGCCTGAAATTGAAATTGGCAGACGCTGTAGACGTTGCAGAGGATGGAATTATATATTTCTCCGATGCTTCTTACAAATATAATATCGAACAATACATTTATGATTTTCTTGAAGGAAGACCCCATGGAAGATTGTTAAGTTATGATCCATCAACTAAACAGACTAAAACGCTACTTAGCAACCTGCATTTTGCTAATGGCGTTGCAGTCTCTCCAGATCAAAATTATGTTATCTTCTGTGAAACTCCTCT : GAGGAAATGCAAAAAGTATCATATAAAAGGCGAAAAAAAAGGATCCGTGGATATGTTTGTTGATAATTTACCTGGATTTCCTGACAACATTCGTTACGATGGTGAAGGGCATTATTGGATTGCATTTGCCTCGGTTAGTTTCTTCATAACATTTAAATTTAATGTGTTCAACAGGGTACACTGCTCTCTCATATTTTGTTTCTGATAACTTGAACAGGAAAACACATATTCATGGGACTTGACCCTAAAGTACCCATTCATCAGAAAGATAATGGCTATAATGGTGAAATATGTTGGACAACCAAAGACAGAGAAAAATGGTGGTGTTTTATCTGTTGATTTACAAGGAAATCCACTGGAACACTATTATGATGAGGATTTGACAATGGTGTCAAGTGGCATTAAGATTGGTGATCATTTGTACTGTGGCTCTGTTAAGTCTCCGTATATACTACGCCTCAATCTCAAACAATATCCTGCCGTTTAAACTTCATAAACAAAAAT : TTGCATAAGATTTCCACTATATAAGATGTGTAAGTGTTTTCTTTTTAATTTATTATAA : CTCGATTTATTATGACAAGCTTGAAATCTTAAACTTTTTAAAATAAAATTTATATATTTAAAAATTAAAATATAAATTAAAAACTACTATAAATGACAGACAATATAAAAGATATAAAAAAAA</gDNA_template>
            <first_frame> S  T  L  L  L  R  V  K  L  K  C  *  Q  R  K  L  K  A  *  N  *  N  W  Q  T  L  *  T  L  Q  R  M  E  L  Y  I  S  P  M  L  L  T  N  I  I  S  N  N  T  F  M  I  F  L  K  E  D  P  M  E  D  C  *  V  M  I  H  Q  L  N  R  L  K  R  Y  L  A  T  C  I  L  L  M  A  L  Q  S  L  Q  I  K  I  M  L  S  S  V  K  L  L   : *  G  N  A  K  S  I  I  *  K  A  K  K  K  D  P  W  I  C  L  L  I  I  Y  L  D  F  L  T  T  F  V  T  M  V  K  G  I  I  G  L  H  L  P  R  L  V  S  S  *  H  L  N  L  M  C  S  T  G  Y  T  A  L  S  Y  F  V  S  D  N  L  N  R  K  T  H  I  H  G  T  *  P  *  S  T  H  S  S  E  R  *  W  L  *  W  *  N  M  L  D  N  Q  R  Q  R  K  M  V  V  F  Y  L  L  I  Y  K  E  I  H  W  N  T  I  M  M  R  I  *  Q  W  C  Q  V  A  L  R  L  V  I  I  C  T  V  A  L  L  S  L  R  I  Y  Y  A  S  I  S  N  N  I  L  P  F  K  L  H  K  Q  K   : F  A  *  D  F  H  Y  I  R  C  V  S  V  F  F  L  I  Y  Y  N :   S  I  Y  Y  D  K  L  E  I  L  N  F  L  K  *  N  L  Y  I  *  K  L  K  Y  K  L  K  T  T  I  N  D  R  Q  Y  K  R  Y  K  K   </first_frame>
            <second_frame>  Q  R  Y  F  *  G  *  N  *  S  A  N  R  G  S  *  R  P  E  I  E  I  G  R  R  C  R  R  C  R  G  W  N  Y  I  F  L  R  C  F  L  Q  I  *  Y  R  T  I  H  L  *  F  S  *  R  K  T  P  W  K  I  V  K  L  *  S  I  N  *  T  D  *  N  A  T  *  Q  P  A  F  C  *  W  R  C  S  L  S  R  S  K  L  C  Y  L  L  *  N  S  S  :  E  E  M  Q  K  V  S  Y  K  R  R  K  K  R  I  R  G  Y  V  C  *  *  F  T  W  I  S  *  Q  H  S  L  R  W  *  R  A  L  L  D  C  I  C  L  G  *  F  L  H  N  I  *  I  *  C  V  Q  Q  G  T  L  L  S  H  I  L  F  L  I  T  *  T  G  K  H  I  F  M  G  L  D  P  K  V  P  I  H  Q  K  D  N  G  Y  N  G  E  I  C  W  T  T  K  D  R  E  K  W  W  C  F  I  C  *  F  T  R  K  S  T  G  T  L  L  *  *  G  F  D  N  G  V  K  W  H  *  D  W  *  S  F  V  L  W  L  C  *  V  S  V  Y  T  T  P  Q  S  Q  T  I  S  C  R  L  N  F  I  N  K  N  :  L  H  K  I  S  T  I  *  D  V  *  V  F  S  F  *  F  I  I   : T  R  F  I  M  T  S  L  K  S  *  T  F  *  N  K  I  Y  I  F  K  N  *  N  I  N  *  K  L  L  *  M  T  D  N  I  K  D  I  K  K  </second_frame>
            <third_frame>   N  V  T  S  E  G  E  I  K  V  L  T  E  E  A  E  G  L  K  L  K  L  A  D  A  V  D  V  A  E  D  G  I  I  Y  F  S  D  A  S  Y  K  Y  N  I  E  Q  Y  I  Y  D  F  L  E  G  R  P  H  G  R  L  L  S  Y  D  P  S  T  K  Q  T  K  T  L  L  S  N  L  H  F  A  N  G  V  A  V  S  P  D  Q  N  Y  V  I  F  C  E  T  P  L :   R  K  C  K  K  Y  H  I  K  G  E  K  K  G  S  V  D  M  F  V  D  N  L  P  G  F  P  D  N  I  R  Y  D  G  E  G  H  Y  W  I  A  F  A  S  V  S  F  F  I  T  F  K  F  N  V  F  N  R  V  H  C  S  L  I  F  C  F  *  *  L  E  Q  E  N  T  Y  S  W  D  L  T  L  K  Y  P  F  I  R  K  I  M  A  I  M  V  K  Y  V  G  Q  P  K  T  E  K  N  G  G  V  L  S  V  D  L  Q  G  N  P  L  E  H  Y  Y  D  E  D  L  T  M  V  S  S  G  I  K  I  G  D  H  L  Y  C  G  S  V  K  S  P  Y  I  L  R  L  N  L  K  Q  Y  P  A  V  *  T  S  *  T  K  I :   C  I  R  F  P  L  Y  K  M  C  K  C  F  L  F  N  L  L  *  :  L  D  L  L  *  Q  A  *  N  L  K  L  F  K  I  K  F  I  Y  L  K  I  K  I  *  I  K  N  Y  Y  K  *  Q  T  I  *  K  I  *  K  K </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0031D11.1" strand="-"/>
                <serials PGL_serial="10" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="75963" stop="75665"/>
                    <exon start="75588" stop="75384"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>501</number_coding_nucleotides>
                  <number_encoded_amino_acids>167</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NVTSEGEIKVLTEEAEGLKLKLADAVDVAEDGIIYFSDASYKYNIEQYIYDFLEGRPHGRLLSYDPSTKQTKTLLSNLHFANGVAVSPDQNYVIFCETPLRKCKKYHIKGEKKGSVDMFVDNLPGFPDNIRYDGEGHYWIAFASVSFFITFKFNVFNRVHCSLIFCF*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0031D11.1" strand="-"/>
                <serials PGL_serial="10" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="75380" stop="75102"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>276</number_coding_nucleotides>
                  <number_encoded_amino_acids>92</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LEQENTYSWDLTLKYPFIRKIMAIMVKYVGQPKTEKNGGVLSVDLQGNPLEHYYDEDLTMVSSGIKIGDHLYCGSVKSPYILRLNLKQYPAV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="-" PGL_start="85227" PGL_stop="84805"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="85227" e_stop="84805"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="85227" e_stop="84805" e_length="423"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="85227" stop="84805"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U584932" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TGAAGGATCGCGCTGTTGACGTAGTCAAAACTGATGGGAAAACTATAAGCACACTTGAAATTGAAGGTGTTTTGATTAGGCATCCTATGGTTTTGGAAGTTGCAGTTGTAGCAAGATGTGATGATGTTCTTGGAGAGACCCCTTGTGCTTTTGTGAAACTGAAAAAAGGGTGTTTTATGACTGATGAAGAAATTATCAAGTTTTGTGAAGATTGGCTGCAGGATTACATGGTTCCTAAGGCAGTAATCTTTGGTGATTTACCATTCAATTCTTCAGGGAAAATACAGAAATTTATACTTAGGGACAAGGTCAACAATGCAATGAAGTTGTGTCTACAAGTTGGGTGCAACTCAGTTGGCGAGCTGCCCACACCTTCATCCTAGTGGTGGGGATTCGAATTTCGATATATTCCCTCCCCACCAT</gDNA_template>
            <first_frame> *  R  I  A  L  L  T  *  S  K  L  M  G  K  L  *  A  H  L  K  L  K  V  F  *  L  G  I  L  W  F  W  K  L  Q  L  *  Q  D  V  M  M  F  L  E  R  P  L  V  L  L  *  N  *  K  K  G  V  L  *  L  M  K  K  L  S  S  F  V  K  I  G  C  R  I  T  W  F  L  R  Q  *  S  L  V  I  Y  H  S  I  L  Q  G  K  Y  R  N  L  Y  L  G  T  R  S  T  M  Q  *  S  C  V  Y  K  L  G  A  T  Q  L  A  S  C  P  H  L  H  P  S  G  G  D  S  N  F  D  I  F  P  P  H  H </first_frame>
            <second_frame>  E  G  S  R  C  *  R  S  Q  N  *  W  E  N  Y  K  H  T  *  N  *  R  C  F  D  *  A  S  Y  G  F  G  S  C  S  C  S  K  M  *  *  C  S  W  R  D  P  L  C  F  C  E  T  E  K  R  V  F  Y  D  *  *  R  N  Y  Q  V  L  *  R  L  A  A  G  L  H  G  S  *  G  S  N  L  W  *  F  T  I  Q  F  F  R  E  N  T  E  I  Y  T  *  G  Q  G  Q  Q  C  N  E  V  V  S  T  S  W  V  Q  L  S  W  R  A  A  H  T  F  I  L  V  V  G  I  R  I  S  I  Y  S  L  P  T   </second_frame>
            <third_frame>   K  D  R  A  V  D  V  V  K  T  D  G  K  T  I  S  T  L  E  I  E  G  V  L  I  R  H  P  M  V  L  E  V  A  V  V  A  R  C  D  D  V  L  G  E  T  P  C  A  F  V  K  L  K  K  G  C  F  M  T  D  E  E  I  I  K  F  C  E  D  W  L  Q  D  Y  M  V  P  K  A  V  I  F  G  D  L  P  F  N  S  S  G  K  I  Q  K  F  I  L  R  D  K  V  N  N  A  M  K  L  C  L  Q  V  G  C  N  S  V  G  E  L  P  T  P  S  S  *  W  W  G  F  E  F  R  Y  I  P  S  P  P  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0031D11.1" strand="-"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="85225" stop="84845"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>378</number_coding_nucleotides>
                  <number_encoded_amino_acids>126</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KDRAVDVVKTDGKTISTLEIEGVLIRHPMVLEVAVVARCDDVLGETPCAFVKLKKGCFMTDEEIIKFCEDWLQDYMVPKAVIFGDLPFNSSGKIQKFILRDKVNNAMKLCLQVGCNSVGELPTPSS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="-" PGL_start="85453" PGL_stop="85254"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="85453" e_stop="85254"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.995"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.995">
            <gDNA_exon_boundary e_start="85453" e_stop="85254" e_length="200"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="85453" stop="85254"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U601166" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CGTGAAGGGGTTCACAACATTATGATGGAAGAAGTTGATGTAAAAGATCCAGAGAGTATGAAAAGTGTACCAGCAGATGGAAAAACCACAGGGGAAATCATGTTTAGAGGCAATGCTATGATGATGGGGTACTTGAAAGATTCATCAAGAACTGAAGAAGCTTTTGAGGGAGGGTGGTATAGGACTAAAGATCTTGGTGT</gDNA_template>
            <first_frame> R  E  G  V  H  N  I  M  M  E  E  V  D  V  K  D  P  E  S  M  K  S  V  P  A  D  G  K  T  T  G  E  I  M  F  R  G  N  A  M  M  M  G  Y  L  K  D  S  S  R  T  E  E  A  F  E  G  G  W  Y  R  T  K  D  L  G   </first_frame>
            <second_frame>  V  K  G  F  T  T  L  *  W  K  K  L  M  *  K  I  Q  R  V  *  K  V  Y  Q  Q  M  E  K  P  Q  G  K  S  C  L  E  A  M  L  *  *  W  G  T  *  K  I  H  Q  E  L  K  K  L  L  R  E  G  G  I  G  L  K  I  L  V  </second_frame>
            <third_frame>   *  R  G  S  Q  H  Y  D  G  R  S  *  C  K  R  S  R  E  Y  E  K  C  T  S  R  W  K  N  H  R  G  N  H  V  *  R  Q  C  Y  D  D  G  V  L  E  R  F  I  K  N  *  R  S  F  *  G  R  V  V  *  D  *  R  S  W  C </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0031D11.1" strand="-"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="85453" stop="85256"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>198</number_coding_nucleotides>
                  <number_encoded_amino_acids>66</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>REGVHNIMMEEVDVKDPESMKSVPADGKTTGEIMFRGNAMMMGYLKDSSRTEEAFEGGWYRTKDLG</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="-" PGL_start="89125" PGL_stop="85797"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="89125" e_stop="88933"/>
            <exon e_start="86344" e_stop="85797"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="89125" e_stop="88933" e_length="193"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.999">
            <gDNA_intron_boundary i_start="88932" i_stop="86345" i_length="2588"/>
          </intron>
          <exon e_serial="2" e_score="0.998">
            <gDNA_exon_boundary e_start="86344" e_stop="85797" e_length="548"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="89125" stop="88933"/>
              <exon start="86344" stop="85797"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U598791" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GGGATTGGTAGTTTGCCCTGCAAACCACGTACCATTGACACCTCTAAGTTTTTTGGAACGTGCTGCATTTGTTTACCGCAAAAACATAGCCTTAATTTATGGAAACATAAGTTATTCATGGGAAGAATTACATGGAAGATGTATCAACCTTGCATCTGCTCTTTCTCAACTTGGAGTTTCATCTGGTGATGTT : GTGGCAACGGTGGCACCTAATGTAGCAGCACAATATGAGCTACATTTTGGTGTACCAATGGCTGGTGCAGTCCTTTCTGCACTCAACACAATGCTAGATGCCACCACATTGGCTCAAAAACTCCAACAATTGGAGGCCAAAATCATTTTTGTATACTCTGATTTCATTGAACTAGTGCTTCAAGCACTTGCCATTCTTCAAGAAAAAGACAAATCTTGTCTAATTGTCTTAATCCATGAAGGAAACAATGTAACAAAACCACCAGTGTCATCATCAGGGCCATCAAAAATTCTGGATTACCAAACACTTCTTGAAATGGGGCAGCCTAATTTCAAGATTATGCATCCGAAAAATGAATTTGATCCGATTTCGATCAATTTTACTTCTGGATCAACAGGGAAGCCTAAAGGGGCTGTGTATAGCCATAGAGCTGCTTATTTGAATACAATTGCTGACATTTTTCGATACGAAATGGGAAAAAGCCCTGTTTTTCTCTGGACAGTGGATATGTTTCGATGCAACGGGTGGTGTCTCCCCTGGACAATTGC</gDNA_template>
            <first_frame> G  I  G  S  L  P  C  K  P  R  T  I  D  T  S  K  F  F  G  T  C  C  I  C  L  P  Q  K  H  S  L  N  L  W  K  H  K  L  F  M  G  R  I  T  W  K  M  Y  Q  P  C  I  C  S  F  S  T  W  S  F  I  W  *  C   : C  G  N  G  G  T  *  C  S  S  T  I  *  A  T  F  W  C  T  N  G  W  C  S  P  F  C  T  Q  H  N  A  R  C  H  H  I  G  S  K  T  P  T  I  G  G  Q  N  H  F  C  I  L  *  F  H  *  T  S  A  S  S  T  C  H  S  S  R  K  R  Q  I  L  S  N  C  L  N  P  *  R  K  Q  C  N  K  T  T  S  V  I  I  R  A  I  K  N  S  G  L  P  N  T  S  *  N  G  A  A  *  F  Q  D  Y  A  S  E  K  *  I  *  S  D  F  D  Q  F  Y  F  W  I  N  R  E  A  *  R  G  C  V  *  P  *  S  C  L  F  E  Y  N  C  *  H  F  S  I  R  N  G  K  K  P  C  F  S  L  D  S  G  Y  V  S  M  Q  R  V  V  S  P  L  D  N  C </first_frame>
            <second_frame>  G  L  V  V  C  P  A  N  H  V  P  L  T  P  L  S  F  L  E  R  A  A  F  V  Y  R  K  N  I  A  L  I  Y  G  N  I  S  Y  S  W  E  E  L  H  G  R  C  I  N  L  A  S  A  L  S  Q  L  G  V  S  S  G  D  V  :  V  A  T  V  A  P  N  V  A  A  Q  Y  E  L  H  F  G  V  P  M  A  G  A  V  L  S  A  L  N  T  M  L  D  A  T  T  L  A  Q  K  L  Q  Q  L  E  A  K  I  I  F  V  Y  S  D  F  I  E  L  V  L  Q  A  L  A  I  L  Q  E  K  D  K  S  C  L  I  V  L  I  H  E  G  N  N  V  T  K  P  P  V  S  S  S  G  P  S  K  I  L  D  Y  Q  T  L  L  E  M  G  Q  P  N  F  K  I  M  H  P  K  N  E  F  D  P  I  S  I  N  F  T  S  G  S  T  G  K  P  K  G  A  V  Y  S  H  R  A  A  Y  L  N  T  I  A  D  I  F  R  Y  E  M  G  K  S  P  V  F  L  W  T  V  D  M  F  R  C  N  G  W  C  L  P  W  T  I   </second_frame>
            <third_frame>   D  W  *  F  A  L  Q  T  T  Y  H  *  H  L  *  V  F  W  N  V  L  H  L  F  T  A  K  T  *  P  *  F  M  E  T  *  V  I  H  G  K  N  Y  M  E  D  V  S  T  L  H  L  L  F  L  N  L  E  F  H  L  V  M  L :   W  Q  R  W  H  L  M  *  Q  H  N  M  S  Y  I  L  V  Y  Q  W  L  V  Q  S  F  L  H  S  T  Q  C  *  M  P  P  H  W  L  K  N  S  N  N  W  R  P  K  S  F  L  Y  T  L  I  S  L  N  *  C  F  K  H  L  P  F  F  K  K  K  T  N  L  V  *  L  S  *  S  M  K  E  T  M  *  Q  N  H  Q  C  H  H  Q  G  H  Q  K  F  W  I  T  K  H  F  L  K  W  G  S  L  I  S  R  L  C  I  R  K  M  N  L  I  R  F  R  S  I  L  L  L  D  Q  Q  G  S  L  K  G  L  C  I  A  I  E  L  L  I  *  I  Q  L  L  T  F  F  D  T  K  W  E  K  A  L  F  F  S  G  Q  W  I  C  F  D  A  T  G  G  V  S  P  G  Q  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0031D11.1" strand="-"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="89124" stop="88933"/>
                    <exon start="86344" stop="85799"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>738</number_coding_nucleotides>
                  <number_encoded_amino_acids>246</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GLVVCPANHVPLTPLSFLERAAFVYRKNIALIYGNISYSWEELHGRCINLASALSQLGVSSGDVVATVAPNVAAQYELHFGVPMAGAVLSALNTMLDATTLAQKLQQLEAKIIFVYSDFIELVLQALAILQEKDKSCLIVLIHEGNNVTKPPVSSSGPSKILDYQTLLEMGQPNFKIMHPKNEFDPISINFTSGSTGKPKGAVYSHRAAYLNTIADIFRYEMGKSPVFLWTVDMFRCNGWCLPWTI</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="+" PGL_start="94186" PGL_stop="95269"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="94186" e_stop="94482"/>
            <exon e_start="94556" e_stop="94652"/>
            <exon e_start="94714" e_stop="95269"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.994" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.990" acc_prob="0.997" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="94186" e_stop="94482" e_length="297"/>
          </exon>
          <intron i_serial="1" don_prob="0.994" acc_prob="0.999">
            <gDNA_intron_boundary i_start="94483" i_stop="94555" i_length="73"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="94556" e_stop="94652" e_length="97"/>
          </exon>
          <intron i_serial="2" don_prob="0.990" acc_prob="0.997">
            <gDNA_intron_boundary i_start="94653" i_stop="94713" i_length="61"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="94714" e_stop="95269" e_length="556"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94186" stop="94482"/>
              <exon start="94556" stop="94652"/>
              <exon start="94714" stop="95269"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U581507" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAGCCAGAGGAAAAATGAAGTTCAATATTGTATCACCCGTTGCACTGTCTTGTCTCTTTTTCTTGTTCCTAACAGGTACTTTAGCACAAAATGCCGGTTCCATTGTAACGCGGGAATTGTTCGAACAAATGCTGAGTTTTAGGAACAATGACGCATGTCCTGCCAAAGGATTCTACACTTATGATGCATTCATAGCTGCAGCCAATTCGTTTCCAGGTTTTGGTACTGCTGGTGATGATACTGCACGTAAGAAGGAAATTGCTGCCTTTTTCGGTCAAACATCTCACGAAACTAATG : GTGGTAGTGCAGGAACATTCACTGGAGGATATTGCTTTGTTAAGCAAATAGAGCAGTCAGACAGATACTATGGCAGAGGACCTATCCAATTGACACA : CCAATCTAACTACGAACGAGCTGGACAAGGTATTGGTGTTGGACAAGAGTTAGTGAACAACCCTGATTTAGTTGCGACAGATCCTATAATATCATTCAAAACAGCAATATGGTTCTGGATGACAGAACAGGATAATAAACCATCATGCCACAACGTTATCATTGGACAATGGACGCCATCCCCTAAAGATACAGCAGCTAATAGAGTTCCAGGGTACGGTGTCATTACCAACATCATTAACGGTCAATTTGAATGTGGGATGGGTCCGAATACTGCAGCGGAAAGTCGAATTGGATTTTACAGGAGGTATTGTGGTATGTTGAATGTTCCTACTGGTGAAAATTTGGACTGTAACAATCAAAAGAACTTCGCCCAGGGCTAAGCGTCTTTATTTATATATAGAGAGAGAATGCAAATTATGTTTATGTATTACGTTGTGAAGTCTATAAGTTATATTTGGATGTAATCAATAAGGGGATTCTGTATGCCCATTTAGAAAAATGGAAGTTTATTTTCAGAAATACTAAAGTTATATGATTTTGATCTTTTGTTATAA</gDNA_template>
            <first_frame> K  P  E  E  K  *  S  S  I  L  Y  H  P  L  H  C  L  V  S  F  S  C  S  *  Q  V  L  *  H  K  M  P  V  P  L  *  R  G  N  C  S  N  K  C  *  V  L  G  T  M  T  H  V  L  P  K  D  S  T  L  M  M  H  S  *  L  Q  P  I  R  F  Q  V  L  V  L  L  V  M  I  L  H  V  R  R  K  L  L  P  F  S  V  K  H  L  T  K  L  M  :  V  V  V  Q  E  H  S  L  E  D  I  A  L  L  S  K  *  S  S  Q  T  D  T  M  A  E  D  L  S  N  *  H   : T  N  L  T  T  N  E  L  D  K  V  L  V  L  D  K  S  *  *  T  T  L  I  *  L  R  Q  I  L  *  Y  H  S  K  Q  Q  Y  G  S  G  *  Q  N  R  I  I  N  H  H  A  T  T  L  S  L  D  N  G  R  H  P  L  K  I  Q  Q  L  I  E  F  Q  G  T  V  S  L  P  T  S  L  T  V  N  L  N  V  G  W  V  R  I  L  Q  R  K  V  E  L  D  F  T  G  G  I  V  V  C  *  M  F  L  L  V  K  I  W  T  V  T  I  K  R  T  S  P  R  A  K  R  L  Y  L  Y  I  E  R  E  C  K  L  C  L  C  I  T  L  *  S  L  *  V  I  F  G  C  N  Q  *  G  D  S  V  C  P  F  R  K  M  E  V  Y  F  Q  K  Y  *  S  Y  M  I  L  I  F  C  Y   </first_frame>
            <second_frame>  S  Q  R  K  N  E  V  Q  Y  C  I  T  R  C  T  V  L  S  L  F  L  V  P  N  R  Y  F  S  T  K  C  R  F  H  C  N  A  G  I  V  R  T  N  A  E  F  *  E  Q  *  R  M  S  C  Q  R  I  L  H  L  *  C  I  H  S  C  S  Q  F  V  S  R  F  W  Y  C  W  *  *  Y  C  T  *  E  G  N  C  C  L  F  R  S  N  I  S  R  N  *  W :   W  *  C  R  N  I  H  W  R  I  L  L  C  *  A  N  R  A  V  R  Q  I  L  W  Q  R  T  Y  P  I  D  T  :  P  I  *  L  R  T  S  W  T  R  Y  W  C  W  T  R  V  S  E  Q  P  *  F  S  C  D  R  S  Y  N  I  I  Q  N  S  N  M  V  L  D  D  R  T  G  *  *  T  I  M  P  Q  R  Y  H  W  T  M  D  A  I  P  *  R  Y  S  S  *  *  S  S  R  V  R  C  H  Y  Q  H  H  *  R  S  I  *  M  W  D  G  S  E  Y  C  S  G  K  S  N  W  I  L  Q  E  V  L  W  Y  V  E  C  S  Y  W  *  K  F  G  L  *  Q  S  K  E  L  R  P  G  L  S  V  F  I  Y  I  *  R  E  N  A  N  Y  V  Y  V  L  R  C  E  V  Y  K  L  Y  L  D  V  I  N  K  G  I  L  Y  A  H  L  E  K  W  K  F  I  F  R  N  T  K  V  I  *  F  *  S  F  V  I  </second_frame>
            <third_frame>   A  R  G  K  M  K  F  N  I  V  S  P  V  A  L  S  C  L  F  F  L  F  L  T  G  T  L  A  Q  N  A  G  S  I  V  T  R  E  L  F  E  Q  M  L  S  F  R  N  N  D  A  C  P  A  K  G  F  Y  T  Y  D  A  F  I  A  A  A  N  S  F  P  G  F  G  T  A  G  D  D  T  A  R  K  K  E  I  A  A  F  F  G  Q  T  S  H  E  T  N   : G  G  S  A  G  T  F  T  G  G  Y  C  F  V  K  Q  I  E  Q  S  D  R  Y  Y  G  R  G  P  I  Q  L  T  H :   Q  S  N  Y  E  R  A  G  Q  G  I  G  V  G  Q  E  L  V  N  N  P  D  L  V  A  T  D  P  I  I  S  F  K  T  A  I  W  F  W  M  T  E  Q  D  N  K  P  S  C  H  N  V  I  I  G  Q  W  T  P  S  P  K  D  T  A  A  N  R  V  P  G  Y  G  V  I  T  N  I  I  N  G  Q  F  E  C  G  M  G  P  N  T  A  A  E  S  R  I  G  F  Y  R  R  Y  C  G  M  L  N  V  P  T  G  E  N  L  D  C  N  N  Q  K  N  F  A  Q  G  *  A  S  L  F  I  Y  R  E  R  M  Q  I  M  F  M  Y  Y  V  V  K  S  I  S  Y  I  W  M  *  S  I  R  G  F  C  M  P  I  *  K  N  G  S  L  F  S  E  I  L  K  L  Y  D  F  D  L  L  L  * </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0031D11.1" strand="+"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="94188" stop="94482"/>
                    <exon start="94556" stop="94652"/>
                    <exon start="94714" stop="95095"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>771</number_coding_nucleotides>
                  <number_encoded_amino_acids>257</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ARGKMKFNIVSPVALSCLFFLFLTGTLAQNAGSIVTRELFEQMLSFRNNDACPAKGFYTYDAFIAAANSFPGFGTAGDDTARKKEIAAFFGQTSHETNGGSAGTFTGGYCFVKQIEQSDRYYGRGPIQLTHQSNYERAGQGIGVGQELVNNPDLVATDPIISFKTAIWFWMTEQDNKPSCHNVIIGQWTPSPKDTAANRVPGYGVITNIINGQFECGMGPNTAAESRIGFYRRYCGMLNVPTGENLDCNNQKNFAQG*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="94205" e_stop="94482"/>
            <exon e_start="94556" e_stop="95203"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.994" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="0.966"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="94205" e_stop="94482" e_length="278"/>
          </exon>
          <intron i_serial="1" don_prob="0.994" acc_prob="0.999">
            <gDNA_intron_boundary i_start="94483" i_stop="94555" i_length="73"/>
          </intron>
          <exon e_serial="2" e_score="0.966">
            <gDNA_exon_boundary e_start="94556" e_stop="95203" e_length="648"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94205" stop="94482"/>
              <exon start="94556" stop="95203"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U578942" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTTCAATATTGTATCACCCGTTGCACTGTCTTGTCTCTTTTTCTTGTTCCTAACAGGTACTTTAGCACAAAATGCCGGTTCCATTGTAACGCGGGAATTGTTCGAACAAATGCTGAGTTTTAGGAACAATGACGCATGTCCTGCCAAAGGATTCTACACTTATGATGCATTCATAGCTGCAGCCAATTCGTTTCCAGGTTTTGGTACTGCTGGTGATGATACTGCACGTAAGAAGGAAATTGCTGCCTTTTTCGGTCAAACATCTCACGAAACTAATG : GTGGTAGTGCAGGAACATTCACTGGAGGATATTGCTTTGTTAAGCAAATAGAGCAGTCAGACAGATACTATGGCAGAGGACCTATCCAATTGACACAGTAAGACAATTCAATAGAATATCAACATTTGGAATCATTAGTAATATTCTTTTTTATGCAGCCAATCTAACTACGAACGAGCTGGACAAGGTATTGGTGTTGGACAAGAGTTAGTGAACAACCCTGATTTAGTTGCGACAGATCCTATAATATCATTCAAAACAGCAATATGGTTCTGGATGACAGAACAGGATAATAAACCATCATGCCACAACGTTATCATTGGACAATGGACGCCATCCCCTAAAGATACAGCAGCTAATAGAGTTCCAGGGTACGGTGTCATTACCAACATCATTAACGGTCAATTTGAATGTGGGATGGGTCCGAATACTGCAGCGGAAAGTCGAATTGGATTTTACAGGAGGTATTGTGGTATGTTGAATGTTCCTACTGGTGAAAATTTGGACTGTAACAATCAAAAGAACTTCGCCCAGGGCTAAGCGTCTTTATTTATATATAGAGAGAGAATGCAAATTATGTTTATGTATTACGTTGTGAAGTCTATAAGTTATATTTGGATGTAATCAATAAGGGGATTCTGTATGCCC</gDNA_template>
            <first_frame> V  Q  Y  C  I  T  R  C  T  V  L  S  L  F  L  V  P  N  R  Y  F  S  T  K  C  R  F  H  C  N  A  G  I  V  R  T  N  A  E  F  *  E  Q  *  R  M  S  C  Q  R  I  L  H  L  *  C  I  H  S  C  S  Q  F  V  S  R  F  W  Y  C  W  *  *  Y  C  T  *  E  G  N  C  C  L  F  R  S  N  I  S  R  N  *  W :   W  *  C  R  N  I  H  W  R  I  L  L  C  *  A  N  R  A  V  R  Q  I  L  W  Q  R  T  Y  P  I  D  T  V  R  Q  F  N  R  I  S  T  F  G  I  I  S  N  I  L  F  Y  A  A  N  L  T  T  N  E  L  D  K  V  L  V  L  D  K  S  *  *  T  T  L  I  *  L  R  Q  I  L  *  Y  H  S  K  Q  Q  Y  G  S  G  *  Q  N  R  I  I  N  H  H  A  T  T  L  S  L  D  N  G  R  H  P  L  K  I  Q  Q  L  I  E  F  Q  G  T  V  S  L  P  T  S  L  T  V  N  L  N  V  G  W  V  R  I  L  Q  R  K  V  E  L  D  F  T  G  G  I  V  V  C  *  M  F  L  L  V  K  I  W  T  V  T  I  K  R  T  S  P  R  A  K  R  L  Y  L  Y  I  E  R  E  C  K  L  C  L  C  I  T  L  *  S  L  *  V  I  F  G  C  N  Q  *  G  D  S  V  C   </first_frame>
            <second_frame>  F  N  I  V  S  P  V  A  L  S  C  L  F  F  L  F  L  T  G  T  L  A  Q  N  A  G  S  I  V  T  R  E  L  F  E  Q  M  L  S  F  R  N  N  D  A  C  P  A  K  G  F  Y  T  Y  D  A  F  I  A  A  A  N  S  F  P  G  F  G  T  A  G  D  D  T  A  R  K  K  E  I  A  A  F  F  G  Q  T  S  H  E  T  N   : G  G  S  A  G  T  F  T  G  G  Y  C  F  V  K  Q  I  E  Q  S  D  R  Y  Y  G  R  G  P  I  Q  L  T  Q  *  D  N  S  I  E  Y  Q  H  L  E  S  L  V  I  F  F  F  M  Q  P  I  *  L  R  T  S  W  T  R  Y  W  C  W  T  R  V  S  E  Q  P  *  F  S  C  D  R  S  Y  N  I  I  Q  N  S  N  M  V  L  D  D  R  T  G  *  *  T  I  M  P  Q  R  Y  H  W  T  M  D  A  I  P  *  R  Y  S  S  *  *  S  S  R  V  R  C  H  Y  Q  H  H  *  R  S  I  *  M  W  D  G  S  E  Y  C  S  G  K  S  N  W  I  L  Q  E  V  L  W  Y  V  E  C  S  Y  W  *  K  F  G  L  *  Q  S  K  E  L  R  P  G  L  S  V  F  I  Y  I  *  R  E  N  A  N  Y  V  Y  V  L  R  C  E  V  Y  K  L  Y  L  D  V  I  N  K  G  I  L  Y  A  </second_frame>
            <third_frame>   S  I  L  Y  H  P  L  H  C  L  V  S  F  S  C  S  *  Q  V  L  *  H  K  M  P  V  P  L  *  R  G  N  C  S  N  K  C  *  V  L  G  T  M  T  H  V  L  P  K  D  S  T  L  M  M  H  S  *  L  Q  P  I  R  F  Q  V  L  V  L  L  V  M  I  L  H  V  R  R  K  L  L  P  F  S  V  K  H  L  T  K  L  M  :  V  V  V  Q  E  H  S  L  E  D  I  A  L  L  S  K  *  S  S  Q  T  D  T  M  A  E  D  L  S  N  *  H  S  K  T  I  Q  *  N  I  N  I  W  N  H  *  *  Y  S  F  L  C  S  Q  S  N  Y  E  R  A  G  Q  G  I  G  V  G  Q  E  L  V  N  N  P  D  L  V  A  T  D  P  I  I  S  F  K  T  A  I  W  F  W  M  T  E  Q  D  N  K  P  S  C  H  N  V  I  I  G  Q  W  T  P  S  P  K  D  T  A  A  N  R  V  P  G  Y  G  V  I  T  N  I  I  N  G  Q  F  E  C  G  M  G  P  N  T  A  A  E  S  R  I  G  F  Y  R  R  Y  C  G  M  L  N  V  P  T  G  E  N  L  D  C  N  N  Q  K  N  F  A  Q  G  *  A  S  L  F  I  Y  R  E  R  M  Q  I  M  F  M  Y  Y  V  V  K  S  I  S  Y  I  W  M  *  S  I  R  G  F  C  M  P </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0031D11.1" strand="+"/>
                <serials PGL_serial="14" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="94697" stop="95095"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>396</number_coding_nucleotides>
                  <number_encoded_amino_acids>132</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>YSFLCSQSNYERAGQGIGVGQELVNNPDLVATDPIISFKTAIWFWMTEQDNKPSCHNVIIGQWTPSPKDTAANRVPGYGVITNIINGQFECGMGPNTAAESRIGFYRRYCGMLNVPTGENLDCNNQKNFAQG*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0031D11.1" strand="+"/>
                <serials PGL_serial="14" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="94206" stop="94482"/>
                    <exon start="94556" stop="94656"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>375</number_coding_nucleotides>
                  <number_encoded_amino_acids>125</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FNIVSPVALSCLFFLFLTGTLAQNAGSIVTRELFEQMLSFRNNDACPAKGFYTYDAFIAAANSFPGFGTAGDDTARKKEIAAFFGQTSHETNGGSAGTFTGGYCFVKQIEQSDRYYGRGPIQLTQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="94195" e_stop="94757"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="94195" e_stop="94757" e_length="563"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94195" stop="94757"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U593206" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GAAAAATGAAGTTCAATATTGTATCACCCGTTGCACTGTCTTGTCTCTTTTTCTTGTTCCTAACAGGTACTTTAGCACAAAATGCCGGTTCCATTGTAACGCGGGAATTGTTCGAACAAATGCTGAGTTTTAGGAACAATGACGCATGTCCTGCCAAAGGATTCTACACTTATGATGCATTCATAGCTGCAGCCAATTCGTTTCCAGGTTTTGGTACTGCTGGTGATGATACTGCACGTAAGAAGGAAATTGCTGCCTTTTTCGGTCAAACATCTCACGAAACTAATGGTAATTTGGATCATCCTTCTTAGCATTGTAATTTATAGGTAACAATTGAATTATATCATTCGCTCTTTTGCAGGTGGTAGTGCAGGAACATTCACTGGAGGATATTGCTTTGTTAAGCAAATAGAGCAGTCAGACAGATACTATGGCAGAGGACCTATCCAATTGACACAGTAAGACAATTCAATAGAATATCAACATTTGGAATCATTAGTAATATTCTTTTTTATGCAGCCAATCTAACTACGAACGAGCTGGACAAGGTATTGGTGTTGGAC</gDNA_template>
            <first_frame> E  K  *  S  S  I  L  Y  H  P  L  H  C  L  V  S  F  S  C  S  *  Q  V  L  *  H  K  M  P  V  P  L  *  R  G  N  C  S  N  K  C  *  V  L  G  T  M  T  H  V  L  P  K  D  S  T  L  M  M  H  S  *  L  Q  P  I  R  F  Q  V  L  V  L  L  V  M  I  L  H  V  R  R  K  L  L  P  F  S  V  K  H  L  T  K  L  M  V  I  W  I  I  L  L  S  I  V  I  Y  R  *  Q  L  N  Y  I  I  R  S  F  A  G  G  S  A  G  T  F  T  G  G  Y  C  F  V  K  Q  I  E  Q  S  D  R  Y  Y  G  R  G  P  I  Q  L  T  Q  *  D  N  S  I  E  Y  Q  H  L  E  S  L  V  I  F  F  F  M  Q  P  I  *  L  R  T  S  W  T  R  Y  W  C  W   </first_frame>
            <second_frame>  K  N  E  V  Q  Y  C  I  T  R  C  T  V  L  S  L  F  L  V  P  N  R  Y  F  S  T  K  C  R  F  H  C  N  A  G  I  V  R  T  N  A  E  F  *  E  Q  *  R  M  S  C  Q  R  I  L  H  L  *  C  I  H  S  C  S  Q  F  V  S  R  F  W  Y  C  W  *  *  Y  C  T  *  E  G  N  C  C  L  F  R  S  N  I  S  R  N  *  W  *  F  G  S  S  F  L  A  L  *  F  I  G  N  N  *  I  I  S  F  A  L  L  Q  V  V  V  Q  E  H  S  L  E  D  I  A  L  L  S  K  *  S  S  Q  T  D  T  M  A  E  D  L  S  N  *  H  S  K  T  I  Q  *  N  I  N  I  W  N  H  *  *  Y  S  F  L  C  S  Q  S  N  Y  E  R  A  G  Q  G  I  G  V  G  </second_frame>
            <third_frame>   K  M  K  F  N  I  V  S  P  V  A  L  S  C  L  F  F  L  F  L  T  G  T  L  A  Q  N  A  G  S  I  V  T  R  E  L  F  E  Q  M  L  S  F  R  N  N  D  A  C  P  A  K  G  F  Y  T  Y  D  A  F  I  A  A  A  N  S  F  P  G  F  G  T  A  G  D  D  T  A  R  K  K  E  I  A  A  F  F  G  Q  T  S  H  E  T  N  G  N  L  D  H  P  S  *  H  C  N  L  *  V  T  I  E  L  Y  H  S  L  F  C  R  W  *  C  R  N  I  H  W  R  I  L  L  C  *  A  N  R  A  V  R  Q  I  L  W  Q  R  T  Y  P  I  D  T  V  R  Q  F  N  R  I  S  T  F  G  I  I  S  N  I  L  F  Y  A  A  N  L  T  T  N  E  L  D  K  V  L  V  L  D </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0031D11.1" strand="+"/>
                <serials PGL_serial="14" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="94197" stop="94505"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>306</number_coding_nucleotides>
                  <number_encoded_amino_acids>102</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KMKFNIVSPVALSCLFFLFLTGTLAQNAGSIVTRELFEQMLSFRNNDACPAKGFYTYDAFIAAANSFPGFGTAGDDTARKKEIAAFFGQTSHETNGNLDHPS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="15" PGL_strand="+" PGL_start="97511" PGL_stop="98999"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="97511" e_stop="97727"/>
            <exon e_start="98330" e_stop="98490"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.981" e_score="0.972"/>
          <exon-only e_score="0.901"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.972">
            <gDNA_exon_boundary e_start="97511" e_stop="97727" e_length="217"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.981">
            <gDNA_intron_boundary i_start="97728" i_stop="98329" i_length="602"/>
          </intron>
          <exon e_serial="2" e_score="0.901">
            <gDNA_exon_boundary e_start="98330" e_stop="98490" e_length="161"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="97511" stop="97727"/>
              <exon start="98330" stop="98490"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U592828" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CAGTAAACACTATCTAATGCATAAGAAAGAACAGAGAGAAGCAAAAAAGAAATGGAGTTTTTGAGATCACAAATGGTATTATGTTGTGTCTTTTTGTTGTTCCTAACGGGAAGCTTTGCACAAGATGTTGGTACAATTGTGACAAGTGACTTGTTCAACGAGATGCTGAAGAATCGAAACGATGATAGATGTCCTGCCAAGGGCTTCTACACTTATG : CTGGGCAAGCAATTGGACAAGACTTAGTTAACAACCCTGACTTAGTAGCTACAGATGCAACTGTATCTTTTAAAACAGCAATATGGTTCTGGATGACCGCACAAGGCAATAAGCCATCATGCCACGATGTTATCACAGGGCAATGGACGCCATCAGCCGCC</gDNA_template>
            <first_frame> Q  *  T  L  S  N  A  *  E  R  T  E  R  S  K  K  E  M  E  F  L  R  S  Q  M  V  L  C  C  V  F  L  L  F  L  T  G  S  F  A  Q  D  V  G  T  I  V  T  S  D  L  F  N  E  M  L  K  N  R  N  D  D  R  C  P  A  K  G  F  Y  T  Y   : A  G  Q  A  I  G  Q  D  L  V  N  N  P  D  L  V  A  T  D  A  T  V  S  F  K  T  A  I  W  F  W  M  T  A  Q  G  N  K  P  S  C  H  D  V  I  T  G  Q  W  T  P  S  A  A </first_frame>
            <second_frame>  S  K  H  Y  L  M  H  K  K  E  Q  R  E  A  K  K  K  W  S  F  *  D  H  K  W  Y  Y  V  V  S  F  C  C  S  *  R  E  A  L  H  K  M  L  V  Q  L  *  Q  V  T  C  S  T  R  C  *  R  I  E  T  M  I  D  V  L  P  R  A  S  T  L  M  :  L  G  K  Q  L  D  K  T  *  L  T  T  L  T  *  *  L  Q  M  Q  L  Y  L  L  K  Q  Q  Y  G  S  G  *  P  H  K  A  I  S  H  H  A  T  M  L  S  Q  G  N  G  R  H  Q  P   </second_frame>
            <third_frame>   V  N  T  I  *  C  I  R  K  N  R  E  K  Q  K  R  N  G  V  F  E  I  T  N  G  I  M  L  C  L  F  V  V  P  N  G  K  L  C  T  R  C  W  Y  N  C  D  K  *  L  V  Q  R  D  A  E  E  S  K  R  *  *  M  S  C  Q  G  L  L  H  L  C :   W  A  S  N  W  T  R  L  S  *  Q  P  *  L  S  S  Y  R  C  N  C  I  F  *  N  S  N  M  V  L  D  D  R  T  R  Q  *  A  I  M  P  R  C  Y  H  R  A  M  D  A  I  S  R  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0031D11.1" strand="+"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="97535" stop="97727"/>
                    <exon start="98330" stop="98490"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>354</number_coding_nucleotides>
                  <number_encoded_amino_acids>118</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ERTERSKKEMEFLRSQMVLCCVFLLFLTGSFAQDVGTIVTSDLFNEMLKNRNDDRCPAKGFYTYAGQAIGQDLVNNPDLVATDATVSFKTAIWFWMTAQGNKPSCHDVITGQWTPSAA</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="97538" e_stop="97805"/>
            <exon e_start="98486" e_stop="98821"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.993"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.993">
            <gDNA_exon_boundary e_start="97538" e_stop="97805" e_length="268"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="97806" i_stop="98485" i_length="680"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="98486" e_stop="98821" e_length="336"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="97538" stop="97805"/>
              <exon start="98486" stop="98821"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U593805" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGAACAGAGAGAAGCAAAAAAGAAATGGAGTTTTTGAGATCACAAATGGTATTATGTTGTGTCTTTTTGTTGTTCCTAACGGGAAGCTTTGCACAAGATGTTGGTACAATTGTGACAAGTGACTTGTTCAACGAGATGCTGAAGAATCGAAACGATGATAGATGTCCTGCCAAGGGCTTCTACACTTATGATGCATTCATAGCTGCAGCCAATTCATTTCCAGGTTTTGGTACTACCGGTGATGATACTGCGCGTAAGAAGGAAATTG : CCGCCGATGCATCAGCAAATAGACAACCAGGCTACGGTGTCATTACAAACATAATTAACGGTGGAATTGAATGTGGCAAAGGACAGAATCCACAAGTGGAGGATCGGATTGGATTCTACAGAAGGTATTGTACGATACTGAATGTTGCTCCCGGGGACAACCTTGATTGCTACGACCAGAGGAACTTTGCTGAGGCCTAGCTTTGTGTTTTAGTCATGATGATGTCTGAATGAATAAGGGATTTTGGATGCCCATTTGGAATATGTAGTTTCTTATTTTGTCTACACAAATAAGAGTTTCTTTTATCTTATAACATAATATACCACATGTACTATT</gDNA_template>
            <first_frame> R  T  E  R  S  K  K  E  M  E  F  L  R  S  Q  M  V  L  C  C  V  F  L  L  F  L  T  G  S  F  A  Q  D  V  G  T  I  V  T  S  D  L  F  N  E  M  L  K  N  R  N  D  D  R  C  P  A  K  G  F  Y  T  Y  D  A  F  I  A  A  A  N  S  F  P  G  F  G  T  T  G  D  D  T  A  R  K  K  E  I   : A  A  D  A  S  A  N  R  Q  P  G  Y  G  V  I  T  N  I  I  N  G  G  I  E  C  G  K  G  Q  N  P  Q  V  E  D  R  I  G  F  Y  R  R  Y  C  T  I  L  N  V  A  P  G  D  N  L  D  C  Y  D  Q  R  N  F  A  E  A  *  L  C  V  L  V  M  M  M  S  E  *  I  R  D  F  G  C  P  F  G  I  C  S  F  L  F  C  L  H  K  *  E  F  L  L  S  Y  N  I  I  Y  H  M  Y  Y  </first_frame>
            <second_frame>  E  Q  R  E  A  K  K  K  W  S  F  *  D  H  K  W  Y  Y  V  V  S  F  C  C  S  *  R  E  A  L  H  K  M  L  V  Q  L  *  Q  V  T  C  S  T  R  C  *  R  I  E  T  M  I  D  V  L  P  R  A  S  T  L  M  M  H  S  *  L  Q  P  I  H  F  Q  V  L  V  L  P  V  M  I  L  R  V  R  R  K  L  :  P  P  M  H  Q  Q  I  D  N  Q  A  T  V  S  L  Q  T  *  L  T  V  E  L  N  V  A  K  D  R  I  H  K  W  R  I  G  L  D  S  T  E  G  I  V  R  Y  *  M  L  L  P  G  T  T  L  I  A  T  T  R  G  T  L  L  R  P  S  F  V  F  *  S  *  *  C  L  N  E  *  G  I  L  D  A  H  L  E  Y  V  V  S  Y  F  V  Y  T  N  K  S  F  F  Y  L  I  T  *  Y  T  T  C  T  I </second_frame>
            <third_frame>   N  R  E  K  Q  K  R  N  G  V  F  E  I  T  N  G  I  M  L  C  L  F  V  V  P  N  G  K  L  C  T  R  C  W  Y  N  C  D  K  *  L  V  Q  R  D  A  E  E  S  K  R  *  *  M  S  C  Q  G  L  L  H  L  *  C  I  H  S  C  S  Q  F  I  S  R  F  W  Y  Y  R  *  *  Y  C  A  *  E  G  N  C :   R  R  C  I  S  K  *  T  T  R  L  R  C  H  Y  K  H  N  *  R  W  N  *  M  W  Q  R  T  E  S  T  S  G  G  S  D  W  I  L  Q  K  V  L  Y  D  T  E  C  C  S  R  G  Q  P  *  L  L  R  P  E  E  L  C  *  G  L  A  L  C  F  S  H  D  D  V  *  M  N  K  G  F  W  M  P  I  W  N  M  *  F  L  I  L  S  T  Q  I  R  V  S  F  I  L  *  H  N  I  P  H  V  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0031D11.1" strand="+"/>
                <serials PGL_serial="15" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="97538" stop="97805"/>
                    <exon start="98486" stop="98685"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>465</number_coding_nucleotides>
                  <number_encoded_amino_acids>155</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RTERSKKEMEFLRSQMVLCCVFLLFLTGSFAQDVGTIVTSDLFNEMLKNRNDDRCPAKGFYTYDAFIAAANSFPGFGTTGDDTARKKEIAADASANRQPGYGVITNIINGGIECGKGQNPQVEDRIGFYRRYCTILNVAPGDNLDCYDQRNFAEA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="97514" e_stop="97841"/>
            <exon e_start="98098" e_stop="98206"/>
            <exon e_start="98310" e_stop="98999"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.993" acc_prob="0.998" e_score="0.997"/>
          <exon-intron don_prob="0.950" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.997">
            <gDNA_exon_boundary e_start="97514" e_stop="97841" e_length="328"/>
          </exon>
          <intron i_serial="1" don_prob="0.993" acc_prob="0.998">
            <gDNA_intron_boundary i_start="97842" i_stop="98097" i_length="256"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="98098" e_stop="98206" e_length="109"/>
          </exon>
          <intron i_serial="2" don_prob="0.950" acc_prob="0.999">
            <gDNA_intron_boundary i_start="98207" i_stop="98309" i_length="103"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="98310" e_stop="98999" e_length="690"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="97514" stop="97841"/>
              <exon start="98098" stop="98206"/>
              <exon start="98310" stop="98999"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U577871" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TAAACACTATCTAATGCATAAGAAAGAACAGAGAGAAGCAAAAAAGAAATGGAGTTTTTGAGATCACAAATGGTATTATGTTGTGTCTTTTTGTTGTTCCTAACGGGAAGCTTTGCACAAGATGTTGGTACAATTGTGACAAGTGACTTGTTCAACGAGATGCTGAAGAATCGAAACGATGATAGATGTCCTGCCAAGGGCTTCTACACTTATGATGCATTCATAGCTGCAGCCAATTCATTTCCAGGTTTTGGTACTACCGGTGATGATACTGCGCGTAAGAAGGAAATTGCTGCCTTTTTCGGTCAAACTTCTCATGAAACTACTG : GTGGTAGCCTAAGTGCTGATGGTCCATTTGCCGGAGGATATTGTTTTGTTAGGGAAGGCAATCAAATGGGAAGTGGATTTTATGGCAGAGGACCTATCCAATTGACAGG : GCAATCTAACTATGACTTAGCTGGGCAAGCAATTGGACAAGACTTAGTTAACAACCCTGACTTAGTAGCTACAGATGCAACTGTATCTTTTAAAACAGCAATATGGTTCTGGATGACCGCACAAGGCAATAAGCCATCATGCCACGATGTTATCACAGGGCAATGGACGCCATCAGCCGCCGATGCATCAGCAAATAGACAACCAGGCTACGGTGTCATTACAAACATAATTAACGGTGGAATTGAATGTGGCAAAGGACAGAATCCACAAGTGGAGGATCGGATTGGATTCTACAGAAGGTATTGTACGATACTGAATGTTGCTCCCGGGGACAACCTTGATTGCTACGACCAGAGGAACTTTGCTGAGGCCTAGCTTTGTGTTTTAGTCATGATGATGTCTGAATGAATAAGGGATTTTGGATGCCCATTTGGAATATGTAGTTTCTTATTTTGTCTACACAAATAAGAGTTTCTTTTATCTTATAACATAATATACCACATGTACTATTATCTCATCGATATTTTAATTTCCCCTTTGTTTACGTAGTTCTTGCATTTACAATTTGCACTAGTATATGAGGGAAGCAATTTTAATAATTCAAGTGGCTACAGGGAGTGTATTTAGAGGGTTAAAAGTGTATTCTTTCTACTGACTTTTAGTAGTAGTTGCACAAAAGGCAGTGAACT</gDNA_template>
            <first_frame> *  T  L  S  N  A  *  E  R  T  E  R  S  K  K  E  M  E  F  L  R  S  Q  M  V  L  C  C  V  F  L  L  F  L  T  G  S  F  A  Q  D  V  G  T  I  V  T  S  D  L  F  N  E  M  L  K  N  R  N  D  D  R  C  P  A  K  G  F  Y  T  Y  D  A  F  I  A  A  A  N  S  F  P  G  F  G  T  T  G  D  D  T  A  R  K  K  E  I  A  A  F  F  G  Q  T  S  H  E  T  T   : G  G  S  L  S  A  D  G  P  F  A  G  G  Y  C  F  V  R  E  G  N  Q  M  G  S  G  F  Y  G  R  G  P  I  Q  L  T  G :   Q  S  N  Y  D  L  A  G  Q  A  I  G  Q  D  L  V  N  N  P  D  L  V  A  T  D  A  T  V  S  F  K  T  A  I  W  F  W  M  T  A  Q  G  N  K  P  S  C  H  D  V  I  T  G  Q  W  T  P  S  A  A  D  A  S  A  N  R  Q  P  G  Y  G  V  I  T  N  I  I  N  G  G  I  E  C  G  K  G  Q  N  P  Q  V  E  D  R  I  G  F  Y  R  R  Y  C  T  I  L  N  V  A  P  G  D  N  L  D  C  Y  D  Q  R  N  F  A  E  A  *  L  C  V  L  V  M  M  M  S  E  *  I  R  D  F  G  C  P  F  G  I  C  S  F  L  F  C  L  H  K  *  E  F  L  L  S  Y  N  I  I  Y  H  M  Y  Y  Y  L  I  D  I  L  I  S  P  L  F  T  *  F  L  H  L  Q  F  A  L  V  Y  E  G  S  N  F  N  N  S  S  G  Y  R  E  C  I  *  R  V  K  S  V  F  F  L  L  T  F  S  S  S  C  T  K  G  S  E   </first_frame>
            <second_frame>  K  H  Y  L  M  H  K  K  E  Q  R  E  A  K  K  K  W  S  F  *  D  H  K  W  Y  Y  V  V  S  F  C  C  S  *  R  E  A  L  H  K  M  L  V  Q  L  *  Q  V  T  C  S  T  R  C  *  R  I  E  T  M  I  D  V  L  P  R  A  S  T  L  M  M  H  S  *  L  Q  P  I  H  F  Q  V  L  V  L  P  V  M  I  L  R  V  R  R  K  L  L  P  F  S  V  K  L  L  M  K  L  L  :  V  V  A  *  V  L  M  V  H  L  P  E  D  I  V  L  L  G  K  A  I  K  W  E  V  D  F  M  A  E  D  L  S  N  *  Q   : G  N  L  T  M  T  *  L  G  K  Q  L  D  K  T  *  L  T  T  L  T  *  *  L  Q  M  Q  L  Y  L  L  K  Q  Q  Y  G  S  G  *  P  H  K  A  I  S  H  H  A  T  M  L  S  Q  G  N  G  R  H  Q  P  P  M  H  Q  Q  I  D  N  Q  A  T  V  S  L  Q  T  *  L  T  V  E  L  N  V  A  K  D  R  I  H  K  W  R  I  G  L  D  S  T  E  G  I  V  R  Y  *  M  L  L  P  G  T  T  L  I  A  T  T  R  G  T  L  L  R  P  S  F  V  F  *  S  *  *  C  L  N  E  *  G  I  L  D  A  H  L  E  Y  V  V  S  Y  F  V  Y  T  N  K  S  F  F  Y  L  I  T  *  Y  T  T  C  T  I  I  S  S  I  F  *  F  P  L  C  L  R  S  S  C  I  Y  N  L  H  *  Y  M  R  E  A  I  L  I  I  Q  V  A  T  G  S  V  F  R  G  L  K  V  Y  S  F  Y  *  L  L  V  V  V  A  Q  K  A  V  N  </second_frame>
            <third_frame>   N  T  I  *  C  I  R  K  N  R  E  K  Q  K  R  N  G  V  F  E  I  T  N  G  I  M  L  C  L  F  V  V  P  N  G  K  L  C  T  R  C  W  Y  N  C  D  K  *  L  V  Q  R  D  A  E  E  S  K  R  *  *  M  S  C  Q  G  L  L  H  L  *  C  I  H  S  C  S  Q  F  I  S  R  F  W  Y  Y  R  *  *  Y  C  A  *  E  G  N  C  C  L  F  R  S  N  F  S  *  N  Y  W :   W  *  P  K  C  *  W  S  I  C  R  R  I  L  F  C  *  G  R  Q  S  N  G  K  W  I  L  W  Q  R  T  Y  P  I  D  R  :  A  I  *  L  *  L  S  W  A  S  N  W  T  R  L  S  *  Q  P  *  L  S  S  Y  R  C  N  C  I  F  *  N  S  N  M  V  L  D  D  R  T  R  Q  *  A  I  M  P  R  C  Y  H  R  A  M  D  A  I  S  R  R  C  I  S  K  *  T  T  R  L  R  C  H  Y  K  H  N  *  R  W  N  *  M  W  Q  R  T  E  S  T  S  G  G  S  D  W  I  L  Q  K  V  L  Y  D  T  E  C  C  S  R  G  Q  P  *  L  L  R  P  E  E  L  C  *  G  L  A  L  C  F  S  H  D  D  V  *  M  N  K  G  F  W  M  P  I  W  N  M  *  F  L  I  L  S  T  Q  I  R  V  S  F  I  L  *  H  N  I  P  H  V  L  L  S  H  R  Y  F  N  F  P  F  V  Y  V  V  L  A  F  T  I  C  T  S  I  *  G  K  Q  F  *  *  F  K  W  L  Q  G  V  Y  L  E  G  *  K  C  I  L  S  T  D  F  *  *  *  L  H  K  R  Q  *  T </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0031D11.1" strand="+"/>
                <serials PGL_serial="15" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="97535" stop="97841"/>
                    <exon start="98098" stop="98206"/>
                    <exon start="98310" stop="98685"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>789</number_coding_nucleotides>
                  <number_encoded_amino_acids>263</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ERTERSKKEMEFLRSQMVLCCVFLLFLTGSFAQDVGTIVTSDLFNEMLKNRNDDRCPAKGFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETTGGSLSADGPFAGGYCFVREGNQMGSGFYGRGPIQLTGQSNYDLAGQAIGQDLVNNPDLVATDATVSFKTAIWFWMTAQGNKPSCHDVITGQWTPSAADASANRQPGYGVITNIINGGIECGKGQNPQVEDRIGFYRRYCTILNVAPGDNLDCYDQRNFAEA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="16" PGL_strand="+" PGL_start="105692" PGL_stop="106451"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="105692" e_stop="106451"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.934"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.934">
            <gDNA_exon_boundary e_start="105692" e_stop="106451" e_length="760"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="105692" stop="106387"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U589391" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="105879" stop="106451"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U589393" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="16" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGAACGCATAGTGCTGAGAGATCCCCTCATAATTTCCCCAAAGCGTAACCATGTGTGAATAAATTTTGAGCTAGTAGGGTTGCAGCCACGAGTAAGTCTTCCCTTGTTATTGTGTAGCCAGAATGCCGCAAAACTTCCATGCCTAAGCGAACTGTTGAGAGTACGTTTCGATTTCTGACTGTGTTAGCCTGGAAGTGCTTGTCCCAACCTTGTTTCTGAGCATGAACGCCCGCAAGCCAACATGTTAGTTGAAGCATCAGGGCGATTAGCAGCATGATATCAAAACGCTCTGAGCTGCTCGTTCGGCTATGGCGTAGGCCTAGTCCGTAGGCAGGACTTTTCAAGTCTCGGAAGGTTTCTTCAATCTGCATTCGCTTCGAATAGATATTAACAAGTTGTTTGGGTGTTCGAATTTCAACAGGTAAGTTAGTTGCTAGAATCCATGGCTCCTTTGCCGACGCTGAGTAGATTTTAGGTGACGGGTGGTGACAATGAGTCCGTGTCGAGCGCTGATTTTTTCGGCCTTTAGAGCGAGATTTATACAATAGAATTTGGCATGAGATTGGATTGCTTTTAGTCAGCCTCTTATAGCCTAAAGTCTTTGAGTGACTAGATGACATATCATGTAAGTTGCTGATAGGTTTCCAGTTTTCCGCTCCTAGGTCTGCATATTGTACTTTTCCTCTTACTCGACTTAACCAGTACCAACCCAGCTTCTCAACGGATTTATACCATGGCACTTTAAAGCCAGCATCACTGA</gDNA_template>
            <first_frame> R  T  H  S  A  E  R  S  P  H  N  F  P  K  A  *  P  C  V  N  K  F  *  A  S  R  V  A  A  T  S  K  S  S  L  V  I  V  *  P  E  C  R  K  T  S  M  P  K  R  T  V  E  S  T  F  R  F  L  T  V  L  A  W  K  C  L  S  Q  P  C  F  *  A  *  T  P  A  S  Q  H  V  S  *  S  I  R  A  I  S  S  M  I  S  K  R  S  E  L  L  V  R  L  W  R  R  P  S  P  *  A  G  L  F  K  S  R  K  V  S  S  I  C  I  R  F  E  *  I  L  T  S  C  L  G  V  R  I  S  T  G  K  L  V  A  R  I  H  G  S  F  A  D  A  E  *  I  L  G  D  G  W  *  Q  *  V  R  V  E  R  *  F  F  R  P  L  E  R  D  L  Y  N  R  I  W  H  E  I  G  L  L  L  V  S  L  L  *  P  K  V  F  E  *  L  D  D  I  S  C  K  L  L  I  G  F  Q  F  S  A  P  R  S  A  Y  C  T  F  P  L  T  R  L  N  Q  Y  Q  P  S  F  S  T  D  L  Y  H  G  T  L  K  P  A  S  L  </first_frame>
            <second_frame>  E  R  I  V  L  R  D  P  L  I  I  S  P  K  R  N  H  V  *  I  N  F  E  L  V  G  L  Q  P  R  V  S  L  P  L  L  L  C  S  Q  N  A  A  K  L  P  C  L  S  E  L  L  R  V  R  F  D  F  *  L  C  *  P  G  S  A  C  P  N  L  V  S  E  H  E  R  P  Q  A  N  M  L  V  E  A  S  G  R  L  A  A  *  Y  Q  N  A  L  S  C  S  F  G  Y  G  V  G  L  V  R  R  Q  D  F  S  S  L  G  R  F  L  Q  S  A  F  A  S  N  R  Y  *  Q  V  V  W  V  F  E  F  Q  Q  V  S  *  L  L  E  S  M  A  P  L  P  T  L  S  R  F  *  V  T  G  G  D  N  E  S  V  S  S  A  D  F  F  G  L  *  S  E  I  Y  T  I  E  F  G  M  R  L  D  C  F  *  S  A  S  Y  S  L  K  S  L  S  D  *  M  T  Y  H  V  S  C  *  *  V  S  S  F  P  L  L  G  L  H  I  V  L  F  L  L  L  D  L  T  S  T  N  P  A  S  Q  R  I  Y  T  M  A  L  *  S  Q  H  H  * </second_frame>
            <third_frame>   N  A  *  C  *  E  I  P  S  *  F  P  Q  S  V  T  M  C  E  *  I  L  S  *  *  G  C  S  H  E  *  V  F  P  C  Y  C  V  A  R  M  P  Q  N  F  H  A  *  A  N  C  *  E  Y  V  S  I  S  D  C  V  S  L  E  V  L  V  P  T  L  F  L  S  M  N  A  R  K  P  T  C  *  L  K  H  Q  G  D  *  Q  H  D  I  K  T  L  *  A  A  R  S  A  M  A  *  A  *  S  V  G  R  T  F  Q  V  S  E  G  F  F  N  L  H  S  L  R  I  D  I  N  K  L  F  G  C  S  N  F  N  R  *  V  S  C  *  N  P  W  L  L  C  R  R  *  V  D  F  R  *  R  V  V  T  M  S  P  C  R  A  L  I  F  S  A  F  R  A  R  F  I  Q  *  N  L  A  *  D  W  I  A  F  S  Q  P  L  I  A  *  S  L  *  V  T  R  *  H  I  M  *  V  A  D  R  F  P  V  F  R  S  *  V  C  I  L  Y  F  S  S  Y  S  T  *  P  V  P  T  Q  L  L  N  G  F  I  P  W  H  F  K  A  S  I  T   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02SLe0031D11.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="17" PGL_strand="-" PGL_start="107033" PGL_stop="106413"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="107033" e_stop="106413"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.919"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.919">
            <gDNA_exon_boundary e_start="107033" e_stop="106413" e_length="621"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="107033" stop="106811"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U600659" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="107004" stop="106642"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U604614" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="106942" stop="106413"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U604818" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="17" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CTGATGAATCCCCTAATGATTTTTATCAAAATCATTAAGTTAAGGTAGATACACATCTTGTCATATGATCAAATGGTTTCGCCAAAAATCAATAATCAGACAACAAAATGTGCGAACTCGATATTTTACACGACTCTCTTTACCAATTCTGCCCCGAATTACACTTAAAACGACTCAACAGCTTAACGTTGGCTTGCCACGCCTTACTTGACTGTAAAACTCTCACTCTTACCGAACTTGGCCGTAACCTGCCAACCAAAGCGAGAACAAAACATAACATCAAACGAATCGACCGATTGTTAGGTAATCGTCACCTCCACAAAGAGCGACTCGCTGTATACCGTTGGCATGCTAGCTTTATCTGTTCGGGCAATACGATGCCCATTGTACTTGTTGACTGGTCTGATATCCGTGAGCAAAAACGGCTTATGGTATTGCGAGCTTCAGTCGCACTACACGGTCGTTCTGTTACTCTTTATGAGAAAGCGTTCCCGCTTTCAGAGCAATGTTCAAAGAAAGCTCATGACCAATTTCTAGCCGACCTTGCGAGCATTCTACCGAGTAACACCACACCGCTCATTGTCAGTGATGCTGGCTTTAAAGTGCCATGGTATAAATCCG</gDNA_template>
            <first_frame> L  M  N  P  L  M  I  F  I  K  I  I  K  L  R  *  I  H  I  L  S  Y  D  Q  M  V  S  P  K  I  N  N  Q  T  T  K  C  A  N  S  I  F  Y  T  T  L  F  T  N  S  A  P  N  Y  T  *  N  D  S  T  A  *  R  W  L  A  T  P  Y  L  T  V  K  L  S  L  L  P  N  L  A  V  T  C  Q  P  K  R  E  Q  N  I  T  S  N  E  S  T  D  C  *  V  I  V  T  S  T  K  S  D  S  L  Y  T  V  G  M  L  A  L  S  V  R  A  I  R  C  P  L  Y  L  L  T  G  L  I  S  V  S  K  N  G  L  W  Y  C  E  L  Q  S  H  Y  T  V  V  L  L  L  F  M  R  K  R  S  R  F  Q  S  N  V  Q  R  K  L  M  T  N  F  *  P  T  L  R  A  F  Y  R  V  T  P  H  R  S  L  S  V  M  L  A  L  K  C  H  G  I  N  P </first_frame>
            <second_frame>  *  *  I  P  *  *  F  L  S  K  S  L  S  *  G  R  Y  T  S  C  H  M  I  K  W  F  R  Q  K  S  I  I  R  Q  Q  N  V  R  T  R  Y  F  T  R  L  S  L  P  I  L  P  R  I  T  L  K  T  T  Q  Q  L  N  V  G  L  P  R  L  T  *  L  *  N  S  H  S  Y  R  T  W  P  *  P  A  N  Q  S  E  N  K  T  *  H  Q  T  N  R  P  I  V  R  *  S  S  P  P  Q  R  A  T  R  C  I  P  L  A  C  *  L  Y  L  F  G  Q  Y  D  A  H  C  T  C  *  L  V  *  Y  P  *  A  K  T  A  Y  G  I  A  S  F  S  R  T  T  R  S  F  C  Y  S  L  *  E  S  V  P  A  F  R  A  M  F  K  E  S  S  *  P  I  S  S  R  P  C  E  H  S  T  E  *  H  H  T  A  H  C  Q  *  C  W  L  *  S  A  M  V  *  I   </second_frame>
            <third_frame>   D  E  S  P  N  D  F  Y  Q  N  H  *  V  K  V  D  T  H  L  V  I  *  S  N  G  F  A  K  N  Q  *  S  D  N  K  M  C  E  L  D  I  L  H  D  S  L  Y  Q  F  C  P  E  L  H  L  K  R  L  N  S  L  T  L  A  C  H  A  L  L  D  C  K  T  L  T  L  T  E  L  G  R  N  L  P  T  K  A  R  T  K  H  N  I  K  R  I  D  R  L  L  G  N  R  H  L  H  K  E  R  L  A  V  Y  R  W  H  A  S  F  I  C  S  G  N  T  M  P  I  V  L  V  D  W  S  D  I  R  E  Q  K  R  L  M  V  L  R  A  S  V  A  L  H  G  R  S  V  T  L  Y  E  K  A  F  P  L  S  E  Q  C  S  K  K  A  H  D  Q  F  L  A  D  L  A  S  I  L  P  S  N  T  T  P  L  I  V  S  D  A  G  F  K  V  P  W  Y  K  S  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0031D11.1" strand="-"/>
                <serials PGL_serial="17" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="106938" stop="106414"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>525</number_coding_nucleotides>
                  <number_encoded_amino_acids>175</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SDNKMCELDILHDSLYQFCPELHLKRLNSLTLACHALLDCKTLTLTELGRNLPTKARTKHNIKRIDRLLGNRHLHKERLAVYRWHASFICSGNTMPIVLVDWSDIREQKRLMVLRASVALHGRSVTLYEKAFPLSEQCSKKAHDQFLADLASILPSNTTPLIVSDAGFKVPWYKS</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="18" PGL_strand="+" PGL_start="108955" PGL_stop="110624"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="108955" e_stop="109251"/>
            <exon e_start="109926" e_stop="110079"/>
            <exon e_start="110156" e_stop="110624"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.984" acc_prob="0.998" e_score="0.997"/>
          <exon-intron don_prob="0.989" acc_prob="0.920" e_score="0.994"/>
          <exon-only e_score="0.981"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.997">
            <gDNA_exon_boundary e_start="108955" e_stop="109251" e_length="297"/>
          </exon>
          <intron i_serial="1" don_prob="0.984" acc_prob="0.998">
            <gDNA_intron_boundary i_start="109252" i_stop="109925" i_length="674"/>
          </intron>
          <exon e_serial="2" e_score="0.994">
            <gDNA_exon_boundary e_start="109926" e_stop="110079" e_length="154"/>
          </exon>
          <intron i_serial="2" don_prob="0.989" acc_prob="0.920">
            <gDNA_intron_boundary i_start="110080" i_stop="110155" i_length="76"/>
          </intron>
          <exon e_serial="3" e_score="0.981">
            <gDNA_exon_boundary e_start="110156" e_stop="110624" e_length="469"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108955" stop="109251"/>
              <exon start="109926" stop="110079"/>
              <exon start="110156" stop="110378"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U584901" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="110362" stop="110624"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U576039" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="18" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AACTTGGTAAAAACTAAATGAAGAACAAAATTATGTTTTGGGGTTTTGTTTTGTTTTGTGTGTTGTCTACAAGAGGAGGATTGACACAAGATGTTGGTGCTCTTATTAGTAAAGACATATTTGAGAGAATGCTATTGCATCGTAATGATGCCAATTGTAATGCCAAAGGATTTTACACTTATGATGCTTTTATAACAGCTGCAAGGTCCTTTGCTGCTTTTGGAACTACTGGAAACACCAACACTCGTAAGAAGGAAATCGCTGCATTTTTGGCACAAACTTCTCTTGAAACAACCG : GGGGGTGGGGAACAGCTCCGGATGGTCCATTTTCATGGGGATATTGCTTCAAGCAAGAACAAGGTAGCCCACCAGATTACTGTGTTGCAAATCAACAGTGGCCTTGTGCTCCTGGTAAAAAATACTTTGGTCGAGGTCCCATCCAAATATCCTA : CAACTACAACTATGGACCAGCAGGAAGAGCCATAGGAGTTGATTTGTTAAACAATCCAGATGCTGTTGCAAATGATGCAGTCGTTTCATTCAAGACAGCCTTGTGGTTCTGGATGACGGCCCAGAGACCAAAGCCATCGGCCCATTTTGTTATTACTGGTAAATGGAGACCAACAGGAGCTGATTTGTCTGCTGGTCGTGTCTCTGGCTATGGTTTAATCACCAACATAATTAATGGAGGAATAGAATGTGGAAAAGGTTCTAATCCAAAAATGGAGAATAGAATTGGGTTTTACAAGAGATACTTGGAGTCAATCCTGGGGTCAATTTGGACTGTGCTAAACAAACGCCTTTTGGCCAGTAAAATAAACTACTACATAGTCAAATAATGTACTTCTTCCAGCCATAGTGATTGGTGAGAAATATGTTATCCAAAATATTTAAGTTATATAATAAAACAAAGTTATATT</gDNA_template>
            <first_frame> N  L  V  K  T  K  *  R  T  K  L  C  F  G  V  L  F  C  F  V  C  C  L  Q  E  E  D  *  H  K  M  L  V  L  L  L  V  K  T  Y  L  R  E  C  Y  C  I  V  M  M  P  I  V  M  P  K  D  F  T  L  M  M  L  L  *  Q  L  Q  G  P  L  L  L  L  E  L  L  E  T  P  T  L  V  R  R  K  S  L  H  F  W  H  K  L  L  L  K  Q  P  :  G  G  G  E  Q  L  R  M  V  H  F  H  G  D  I  A  S  S  K  N  K  V  A  H  Q  I  T  V  L  Q  I  N  S  G  L  V  L  L  V  K  N  T  L  V  E  V  P  S  K  Y  P   : T  T  T  T  M  D  Q  Q  E  E  P  *  E  L  I  C  *  T  I  Q  M  L  L  Q  M  M  Q  S  F  H  S  R  Q  P  C  G  S  G  *  R  P  R  D  Q  S  H  R  P  I  L  L  L  L  V  N  G  D  Q  Q  E  L  I  C  L  L  V  V  S  L  A  M  V  *  S  P  T  *  L  M  E  E  *  N  V  E  K  V  L  I  Q  K  W  R  I  E  L  G  F  T  R  D  T  W  S  Q  S  W  G  Q  F  G  L  C  *  T  N  A  F  W  P  V  K  *  T  T  T  *  S  N  N  V  L  L  P  A  I  V  I  G  E  K  Y  V  I  Q  N  I  *  V  I  *  *  N  K  V  I   </first_frame>
            <second_frame>  T  W  *  K  L  N  E  E  Q  N  Y  V  L  G  F  C  F  V  L  C  V  V  Y  K  R  R  I  D  T  R  C  W  C  S  Y  *  *  R  H  I  *  E  N  A  I  A  S  *  *  C  Q  L  *  C  Q  R  I  L  H  L  *  C  F  Y  N  S  C  K  V  L  C  C  F  W  N  Y  W  K  H  Q  H  S  *  E  G  N  R  C  I  F  G  T  N  F  S  *  N  N  R :   G  V  G  N  S  S  G  W  S  I  F  M  G  I  L  L  Q  A  R  T  R  *  P  T  R  L  L  C  C  K  S  T  V  A  L  C  S  W  *  K  I  L  W  S  R  S  H  P  N  I  L  :  Q  L  Q  L  W  T  S  R  K  S  H  R  S  *  F  V  K  Q  S  R  C  C  C  K  *  C  S  R  F  I  Q  D  S  L  V  V  L  D  D  G  P  E  T  K  A  I  G  P  F  C  Y  Y  W  *  M  E  T  N  R  S  *  F  V  C  W  S  C  L  W  L  W  F  N  H  Q  H  N  *  W  R  N  R  M  W  K  R  F  *  S  K  N  G  E  *  N  W  V  L  Q  E  I  L  G  V  N  P  G  V  N  L  D  C  A  K  Q  T  P  F  G  Q  *  N  K  L  L  H  S  Q  I  M  Y  F  F  Q  P  *  *  L  V  R  N  M  L  S  K  I  F  K  L  Y  N  K  T  K  L  Y  </second_frame>
            <third_frame>   L  G  K  N  *  M  K  N  K  I  M  F  W  G  F  V  L  F  C  V  L  S  T  R  G  G  L  T  Q  D  V  G  A  L  I  S  K  D  I  F  E  R  M  L  L  H  R  N  D  A  N  C  N  A  K  G  F  Y  T  Y  D  A  F  I  T  A  A  R  S  F  A  A  F  G  T  T  G  N  T  N  T  R  K  K  E  I  A  A  F  L  A  Q  T  S  L  E  T  T   : G  G  W  G  T  A  P  D  G  P  F  S  W  G  Y  C  F  K  Q  E  Q  G  S  P  P  D  Y  C  V  A  N  Q  Q  W  P  C  A  P  G  K  K  Y  F  G  R  G  P  I  Q  I  S  Y :   N  Y  N  Y  G  P  A  G  R  A  I  G  V  D  L  L  N  N  P  D  A  V  A  N  D  A  V  V  S  F  K  T  A  L  W  F  W  M  T  A  Q  R  P  K  P  S  A  H  F  V  I  T  G  K  W  R  P  T  G  A  D  L  S  A  G  R  V  S  G  Y  G  L  I  T  N  I  I  N  G  G  I  E  C  G  K  G  S  N  P  K  M  E  N  R  I  G  F  Y  K  R  Y  L  E  S  I  L  G  S  I  W  T  V  L  N  K  R  L  L  A  S  K  I  N  Y  Y  I  V  K  *  C  T  S  S  S  H  S  D  W  *  E  I  C  Y  P  K  Y  L  S  Y  I  I  K  Q  S  Y  I </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0031D11.1" strand="+"/>
                <serials PGL_serial="18" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="108972" stop="109251"/>
                    <exon start="109926" stop="110079"/>
                    <exon start="110156" stop="110543"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>819</number_coding_nucleotides>
                  <number_encoded_amino_acids>273</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>MKNKIMFWGFVLFCVLSTRGGLTQDVGALISKDIFERMLLHRNDANCNAKGFYTYDAFITAARSFAAFGTTGNTNTRKKEIAAFLAQTSLETTGGWGTAPDGPFSWGYCFKQEQGSPPDYCVANQQWPCAPGKKYFGRGPIQISYNYNYGPAGRAIGVDLLNNPDAVANDAVVSFKTALWFWMTAQRPKPSAHFVITGKWRPTGADLSAGRVSGYGLITNIINGGIECGKGSNPKMENRIGFYKRYLESILGSIWTVLNKRLLASKINYYIVK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="19" PGL_strand="+" PGL_start="113251" PGL_stop="114136"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="113251" e_stop="114136"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.997">
            <gDNA_exon_boundary e_start="113251" e_stop="114136" e_length="886"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="113251" stop="114136"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U584361" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="19" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGAACCCTAATTTTGTCCTCACAGAAGGAAGAAGTGGTTACAACAAGACGAAGAAACAGCTGAGAAAATGGGGAAATTACCACCTTCCTTAAGGTCAGCTAACTTTGCTGTAAACACTCTCATCAAAACTCCATCTCCATCCCCATCCCCATCCCCACCTCCAACCTCAAAACCCCATTATTATCCCAAAAAATCACAATCACCCAAGAAAAAACCCACATCAATTACTGAACCCCAGCTTCCATCATCTATTCTAGCCTTTGATTCAACATCTCTTTCAGATGCTAAAACCCTTTTCAATTCTCTGATTTCCAGTACCAGAAACCCCTCTACAGACAACAAATTTTATAATGCAGTTCTTCAATCATTTTCCTCCAATTCAACTCTCCAAGATTCAATCTTTTTCCTTAATCACATGATCAAGGTTCACCCTCCTTTCTCCCCTGACAGGTTTACATACCATGTTCTCCTCGTCCAATCTTGTAAGTCTGTTGACCTTTCTTTATCCCCTGTTCATCAGGTTCTTAATCTTATGACTACCAATGGTTTCCCTCCTAATAAGGTCTCCACAGACATTGCTGTGAGGACCCTTTGCTCTTCCGGCCACGAAGAGCAAGCCATTGAGCTAGTGAAAGAACTTTCCTCCAAAGACTCTCCCCCTGATACATATACTTATAATTTTATTATTAGGCATTTGTGCAAGAACAGGCCTTTGAGTACCATGAATAACTTTATTAAAGAAATGAGGGAAGGTTTTGATATAAAACCTGATCTTGTTACATATACAATTATGATTGACAATGTTTGTAATAGTAAAAATCTTAGGGAAGCGACTAGATTATTAGGAGTTCTGAGTGAGGAAGGCTACAAGCCTGATTGCTATGTT</gDNA_template>
            <first_frame> R  T  L  I  L  S  S  Q  K  E  E  V  V  T  T  R  R  R  N  S  *  E  N  G  E  I  T  T  F  L  K  V  S  *  L  C  C  K  H  S  H  Q  N  S  I  S  I  P  I  P  I  P  T  S  N  L  K  T  P  L  L  S  Q  K  I  T  I  T  Q  E  K  T  H  I  N  Y  *  T  P  A  S  I  I  Y  S  S  L  *  F  N  I  S  F  R  C  *  N  P  F  Q  F  S  D  F  Q  Y  Q  K  P  L  Y  R  Q  Q  I  L  *  C  S  S  S  I  I  F  L  Q  F  N  S  P  R  F  N  L  F  P  *  S  H  D  Q  G  S  P  S  F  L  P  *  Q  V  Y  I  P  C  S  P  R  P  I  L  *  V  C  *  P  F  F  I  P  C  S  S  G  S  *  S  Y  D  Y  Q  W  F  P  S  *  *  G  L  H  R  H  C  C  E  D  P  L  L  F  R  P  R  R  A  S  H  *  A  S  E  R  T  F  L  Q  R  L  S  P  *  Y  I  Y  L  *  F  Y  Y  *  A  F  V  Q  E  Q  A  F  E  Y  H  E  *  L  Y  *  R  N  E  G  R  F  *  Y  K  T  *  S  C  Y  I  Y  N  Y  D  *  Q  C  L  *  *  *  K  S  *  G  S  D  *  I  I  R  S  S  E  *  G  R  L  Q  A  *  L  L  C  </first_frame>
            <second_frame>  E  P  *  F  C  P  H  R  R  K  K  W  L  Q  Q  D  E  E  T  A  E  K  M  G  K  L  P  P  S  L  R  S  A  N  F  A  V  N  T  L  I  K  T  P  S  P  S  P  S  P  S  P  P  P  T  S  K  P  H  Y  Y  P  K  K  S  Q  S  P  K  K  K  P  T  S  I  T  E  P  Q  L  P  S  S  I  L  A  F  D  S  T  S  L  S  D  A  K  T  L  F  N  S  L  I  S  S  T  R  N  P  S  T  D  N  K  F  Y  N  A  V  L  Q  S  F  S  S  N  S  T  L  Q  D  S  I  F  F  L  N  H  M  I  K  V  H  P  P  F  S  P  D  R  F  T  Y  H  V  L  L  V  Q  S  C  K  S  V  D  L  S  L  S  P  V  H  Q  V  L  N  L  M  T  T  N  G  F  P  P  N  K  V  S  T  D  I  A  V  R  T  L  C  S  S  G  H  E  E  Q  A  I  E  L  V  K  E  L  S  S  K  D  S  P  P  D  T  Y  T  Y  N  F  I  I  R  H  L  C  K  N  R  P  L  S  T  M  N  N  F  I  K  E  M  R  E  G  F  D  I  K  P  D  L  V  T  Y  T  I  M  I  D  N  V  C  N  S  K  N  L  R  E  A  T  R  L  L  G  V  L  S  E  E  G  Y  K  P  D  C  Y  V </second_frame>
            <third_frame>   N  P  N  F  V  L  T  E  G  R  S  G  Y  N  K  T  K  K  Q  L  R  K  W  G  N  Y  H  L  P  *  G  Q  L  T  L  L  *  T  L  S  S  K  L  H  L  H  P  H  P  H  P  H  L  Q  P  Q  N  P  I  I  I  P  K  N  H  N  H  P  R  K  N  P  H  Q  L  L  N  P  S  F  H  H  L  F  *  P  L  I  Q  H  L  F  Q  M  L  K  P  F  S  I  L  *  F  P  V  P  E  T  P  L  Q  T  T  N  F  I  M  Q  F  F  N  H  F  P  P  I  Q  L  S  K  I  Q  S  F  S  L  I  T  *  S  R  F  T  L  L  S  P  L  T  G  L  H  T  M  F  S  S  S  N  L  V  S  L  L  T  F  L  Y  P  L  F  I  R  F  L  I  L  *  L  P  M  V  S  L  L  I  R  S  P  Q  T  L  L  *  G  P  F  A  L  P  A  T  K  S  K  P  L  S  *  *  K  N  F  P  P  K  T  L  P  L  I  H  I  L  I  I  L  L  L  G  I  C  A  R  T  G  L  *  V  P  *  I  T  L  L  K  K  *  G  K  V  L  I  *  N  L  I  L  L  H  I  Q  L  *  L  T  M  F  V  I  V  K  I  L  G  K  R  L  D  Y  *  E  F  *  V  R  K  A  T  S  L  I  A  M   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0031D11.1" strand="+"/>
                <serials PGL_serial="19" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="113261" stop="114136"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>876</number_coding_nucleotides>
                  <number_encoded_amino_acids>292</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FCPHRRKKWLQQDEETAEKMGKLPPSLRSANFAVNTLIKTPSPSPSPSPPPTSKPHYYPKKSQSPKKKPTSITEPQLPSSILAFDSTSLSDAKTLFNSLISSTRNPSTDNKFYNAVLQSFSSNSTLQDSIFFLNHMIKVHPPFSPDRFTYHVLLVQSCKSVDLSLSPVHQVLNLMTTNGFPPNKVSTDIAVRTLCSSGHEEQAIELVKELSSKDSPPDTYTYNFIIRHLCKNRPLSTMNNFIKEMREGFDIKPDLVTYTIMIDNVCNSKNLREATRLLGVLSEEGYKPDCYV</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 67 chains have been computed
$ 
$ memory statistics:
$ 137192 bytes spliced alignments in total
$ 35 spliced alignments have been stored
$ 3919 bytes was the average size of a spliced alignment
$ 29128 bytes predicted gene locations in total
$ 19 predicted gene locations have been stored
$ 1533 bytes was the average size of a predicted gene location
$ 1 megabytes was the average size of the backtrace matrix
$ 78 backtrace matrices have been allocated
$ 
$ date finished: 2009-12-01 10:58:27
-->
