<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-12-01 10:53:13"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C02SLe0034H10-9CaQU/GenomeThreader_SGN_U_tomato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C02SLe0034H10-9CaQU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0034H10-9CaQU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U588438" ref_strand="+" ref_description="SGN-U588438 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>cttcttgtagcagacgaaatcaaatacccttttgtctccaacgcgaaacagaggatccaaatcagaaggtttccccttgcccactggtttatccaagtttccctttcggtgttttcctaaaccccatttctcaaattggggtagttaaatctgagaatgatggaggcgtcgtcgtaggagaagattcacttaagatatgggcggatagtgtgaagaaaaagaggaagaggaagatgaacaagcacaagttgaagaagctgaggaagcgcttgaggaggaagacaaaggcataggtgaaatttgatgtccctttccggcataatgttaattgtttctgactgaaagatagtcctttttcccatgtcctcgccattttgagttgaaaatattgctcaatttcgattgctaaatcatgttttaggaataatgaacctttttcctcccgagtagagatgtatgtttgggatttattggtcaggctttgtgtaactgttgcagtctaacatagataagccatcatcttagaagcttttagagcaattctgaagaacttttgagaaattcttccacatctatagatagttgttgctgttatttacaattatctgaactctgaagaacacggatcgatagcttcttgttgttattatct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0034H10-9CaQU/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0034H10.2" temp_strand="-" temp_description="C02SLe0034H10.2  AC215453.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0034H10 sequenced_by:kribb upload_account_name:korea">
        <position start="5874" stop="4623"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="5574" g_stop="4923" g_length="652"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="652" r_length="652" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0034H10.2" gen_strand="-" ref_id="SGN-U588438" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>652</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0034H10.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U588438" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="5574" e_stop="4923"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTCTTGTAGCAGACGAAATCAAATACCCTTTTGTCTCCAACGCGAAACAGAGGATCCAAATCAGAAGGTTTCCCCTTGCCCACTGGTTTATCCAAGTTTCCCTTTCGGTGTTTTCCTAAACCCCATTTCTCAAATTGGGGTAGTTAAATCTGAGAATGATGGAGGCGTCGTCGTAGGAGAAGATTCACTTAAGATATGGGCGGATAGTGTGAAGAAAAAGAGGAAGAGGAAGATGAACAAGCACAAGTTGAAGAAGCTGAGGAAGCGCTTGAGGAGGAAGACAAAGGCATAGGTGAAATTTGATGTCCCTTTCCGGCATAATGTTAATTGTTTCTGACTGAAAGATAGTCCTTTTTCCCATGTCCTCGCCATTTTGAGTTGAAAATATTGCTCAATTTCGATTGCTAAATCATGTTTTAGGAATAATGAACCTTTTTCCTCCCGAGTAGAGATGTATGTTTGGGATTTATTGGTCAGGCTTTGTGTAACTGTTGCAGTCTAACATAGATAAGCCATCATCTTAGAAGCTTTTAGAGCAATTCTGAAGAACTTTTGAGAAATTCTTCCACATCTATAGATAGTTGTTGCTGTTATTTACAATTATCTGAACTCTGAAGAACACGGATCGATAGCTTCTTGTTGTTATTATCT</genome_strand>
        <mrna_strand>CTTCTTGTAGCAGACGAAATCAAATACCCTTTTGTCTCCAACGCGAAACAGAGGATCCAAATCAGAAGGTTTCCCCTTGCCCACTGGTTTATCCAAGTTTCCCTTTCGGTGTTTTCCTAAACCCCATTTCTCAAATTGGGGTAGTTAAATCTGAGAATGATGGAGGCGTCGTCGTAGGAGAAGATTCACTTAAGATATGGGCGGATAGTGTGAAGAAAAAGAGGAAGAGGAAGATGAACAAGCACAAGTTGAAGAAGCTGAGGAAGCGCTTGAGGAGGAAGACAAAGGCATAGGTGAAATTTGATGTCCCTTTCCGGCATAATGTTAATTGTTTCTGACTGAAAGATAGTCCTTTTTCCCATGTCCTCGCCATTTTGAGTTGAAAATATTGCTCAATTTCGATTGCTAAATCATGTTTTAGGAATAATGAACCTTTTTCCTCCCGAGTAGAGATGTATGTTTGGGATTTATTGGTCAGGCTTTGTGTAACTGTTGCAGTCTAACATAGATAAGCCATCATCTTAGAAGCTTTTAGAGCAATTCTGAAGAACTTTTGAGAAATTCTTCCACATCTATAGATAGTTGTTGCTGTTATTTACAATTATCTGAACTCTGAAGAACACGGATCGATAGCTTCTTGTTGTTATTATCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0034H10-9CaQU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U566462" ref_strand="+" ref_description="SGN-U566462 Tomato 200607#2 [5 ESTs aligned] ">
      <seq>tttttgatggttcttgaattgttgcactaaatggcttcaattcttcggaaagctctgaggaaccaatttcaatcttccacaacaagaatcatcactaaccttaataaatccgaaccggcaatcctcagttctacctctcctcaaccaccaatcttggctcatccttcttgtagcagacgaaatcaaatacccttttgtctccaacgcgaaacagaggatccaaatcagaaggtttccccttgcccactggtttatccaagtttccctttcggtgttttcctaaaccccatttctcaaattggggtagttaaatctgagaatgatggaggcgtcgtcgtaggagaagattcacttaagatatgggcggatagtgtgaagaaaaagaggaagaggaagatgaacaagcacaagttgaagaagctgaggaagcgcttgaggaggaagacaaaggcataggtgaaatttgatgtccctttccggcataatgttaattgtttctgactgaaagatagtcctttttcccatgtcctcgccattttgagttgaaaatattgctcaatttcgattgctaaatcatgttttaggaataatgaacctttttcctcccgagtagagatgtatgtttggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0034H10-9CaQU/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0034H10.2" temp_strand="-" temp_description="C02SLe0034H10.2  AC215453.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0034H10 sequenced_by:kribb upload_account_name:korea">
        <position start="6037" stop="4810"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="5737" g_stop="5110" g_length="628"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="628" r_length="628" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0034H10.2" gen_strand="-" ref_id="SGN-U566462" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>628</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0034H10.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U566462" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="5737" e_stop="5110"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTTGATGGTTCTTGAATTGTTGCACTAAATGGCTTCAATTCTTCGGAAAGCTCTGAGGAACCAATTTCAATCTTCCACAACAAGAATCATCACTAACCTTAATAAATCCGAACCGGCAATCCTCAGTTCTACCTCTCCTCAACCACCAATCTTGGCTCATCCTTCTTGTAGCAGACGAAATCAAATACCCTTTTGTCTCCAACGCGAAACAGAGGATCCAAATCAGAAGGTTTCCCCTTGCCCACTGGTTTATCCAAGTTTCCCTTTCGGTGTTTTCCTAAACCCCATTTCTCAAATTGGGGTAGTTAAATCTGAGAATGATGGAGGCGTCGTCGTAGGAGAAGATTCACTTAAGATATGGGCGGATAGTGTGAAGAAAAAGAGGAAGAGGAAGATGAACAAGCACAAGTTGAAGAAGCTGAGGAAGCGCTTGAGGAGGAAGACAAAGGCATAGGTGAAATTTGATGTCCCTTTCCGGCATAATGTTAATTGTTTCTGACTGAAAGATAGTCCTTTTTCCCATGTCCTCGCCATTTTGAGTTGAAAATATTGCTCAATTTCGATTGCTAAATCATGTTTTAGGAATAATGAACCTTTTTCCTCCCGAGTAGAGATGTATGTTTGGG</genome_strand>
        <mrna_strand>TTTTTGATGGTTCTTGAATTGTTGCACTAAATGGCTTCAATTCTTCGGAAAGCTCTGAGGAACCAATTTCAATCTTCCACAACAAGAATCATCACTAACCTTAATAAATCCGAACCGGCAATCCTCAGTTCTACCTCTCCTCAACCACCAATCTTGGCTCATCCTTCTTGTAGCAGACGAAATCAAATACCCTTTTGTCTCCAACGCGAAACAGAGGATCCAAATCAGAAGGTTTCCCCTTGCCCACTGGTTTATCCAAGTTTCCCTTTCGGTGTTTTCCTAAACCCCATTTCTCAAATTGGGGTAGTTAAATCTGAGAATGATGGAGGCGTCGTCGTAGGAGAAGATTCACTTAAGATATGGGCGGATAGTGTGAAGAAAAAGAGGAAGAGGAAGATGAACAAGCACAAGTTGAAGAAGCTGAGGAAGCGCTTGAGGAGGAAGACAAAGGCATAGGTGAAATTTGATGTCCCTTTCCGGCATAATGTTAATTGTTTCTGACTGAAAGATAGTCCTTTTTCCCATGTCCTCGCCATTTTGAGTTGAAAATATTGCTCAATTTCGATTGCTAAATCATGTTTTAGGAATAATGAACCTTTTTCCTCCCGAGTAGAGATGTATGTTTGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0034H10-9CaQU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U588439" ref_strand="+" ref_description="SGN-U588439 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>ttcggacgaggttattctttctttctttctctttttgatggttcttgaattgttgcactaaatggcttcaattcttcggaaagctctgaggaaccaatttcaatcttccacaacaagaatcatcactaaccttaataaatccgaaccggcaatcctcagttctacctctcctcaaccaccaatcttggctcatccttcttgtagcagacgaaatcaaatacccttttgtctccaacgcgaaacagaggatccaaatcagaaggtttccccttgcccactggtttatccaagtttccctttcggtgttttcctaaaccccatttctcaaattggggtagttaaatctgagaatgatggaggcgtcgtcgtaggagaagattcacttaagatatgggcggatagtgtgaagaaaaagaggaagaggaagatgaacaagcacaagttgaagaagctgaggaagcgcttgaggaggaagacaaaggcatag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0034H10-9CaQU/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0034H10.2" temp_strand="-" temp_description="C02SLe0034H10.2  AC215453.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0034H10 sequenced_by:kribb upload_account_name:korea">
        <position start="6058" stop="4982"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="5769" g_stop="5282" g_length="488"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="487" r_length="487" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0034H10.2" gen_strand="-" ref_id="SGN-U588439" ref_strand="+">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>488</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0034H10.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U588439" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="5769" e_stop="5282"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCAATTCTCTGTTATTCTTTCTTTCTTTCTCTTTTTGATGGTTCTTGAATTGTTGCACTAAATGGCTTCAATTCTTCGGAAAGCTCTGAGGAACCAATTTCAATCTTCCACAACAAGAATCATCACTAACCTTAATAAATCCGAACCGGCAATCCTCAGTTCTACCTCTCCTCAACCACCAATCTTGGCTCATCCTTCTTGTAGCAGACGAAATCAAATACCCTTTTGTCTCCAACGCGAAACAGAGGATCCAAATCAGAAGGTTTCCCCTTGCCCACTGGTTTATCCAAGTTTCCCTTTCGGTGTTTTCCTAAACCCCATTTCTCAAATTGGGGTAGTTAAATCTGAGAATGATGGAGGCGTCGTCGTAGGAGAAGATTCACTTAAGATATGGGCGGATAGTGTGAAGAAAAAGAGGAAGAGGAAGATGAACAAGCACAAGTTGAAGAAGCTGAGGAAGCGCTTGAGGAGGAAGACAAAGGCATAG</genome_strand>
        <mrna_strand>TTCG-GACGAGGTTATTCTTTCTTTCTTTCTCTTTTTGATGGTTCTTGAATTGTTGCACTAAATGGCTTCAATTCTTCGGAAAGCTCTGAGGAACCAATTTCAATCTTCCACAACAAGAATCATCACTAACCTTAATAAATCCGAACCGGCAATCCTCAGTTCTACCTCTCCTCAACCACCAATCTTGGCTCATCCTTCTTGTAGCAGACGAAATCAAATACCCTTTTGTCTCCAACGCGAAACAGAGGATCCAAATCAGAAGGTTTCCCCTTGCCCACTGGTTTATCCAAGTTTCCCTTTCGGTGTTTTCCTAAACCCCATTTCTCAAATTGGGGTAGTTAAATCTGAGAATGATGGAGGCGTCGTCGTAGGAGAAGATTCACTTAAGATATGGGCGGATAGTGTGAAGAAAAAGAGGAAGAGGAAGATGAACAAGCACAAGTTGAAGAAGCTGAGGAAGCGCTTGAGGAGGAAGACAAAGGCATAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0034H10-9CaQU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U586161" ref_strand="+" ref_description="SGN-U586161 Tomato 200607#2 [2 ESTs aligned] (*GB) gi|157345367|emb|CAO14665.1| (e_value=1e-91) unnamed; (*ATH) AT3G01660.1 (e_value=2e-80) | Symbol: None | expressed protein, similar to putative protein GB:CAB45319 (Arabidopsis thaliana) | chr3:245485-246439 FORWARD | Aliases: F4P13.20, F4P13_20; ">
      <seq>gcccaagacatggaaatccccaaacttacacttgtttcctcttccatccaaaaccaaaacacagccctcaataataataactccaaaagcctataataatgaagataacaattcaacagcaggaaaaatcaaacgaatggtacttactcaacaaggaagaaccaaactaaacattttaccagacaaggaattttatgcctatccaagattcgtcacacacgtcgatgatcgtttcatttccaatttaaccgatctttacaggaaatgtttgaaacctgaatttgaaattcttgaccttatgagctcatgggtcagtcatttaccacaagaagtgaagtacaaaaaggtggttggtcatggacttaatgcccaagagctagcaaaaaatcccaaattggattatttctttgtgagggatttgaatgaagatgagaaatttgagtttgaaaattgtagttttgatgctgttttatgcactgtcagtgtgcagtatcttcaacagcctgagaaggttttcgcggaagtatttcgaattctaagacctggaggagtgtttattgtaagtttcagtaacagattgttctacgataaagcaattagtgcctggagggacagtacaggatacggggagagtgcaacttgtggtacaatattttcaatgtattaagggatttacagagccacaagtgattcgtaaattaccaactaatgatgatcaacanaataaatcacctctcagtaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0034H10-9CaQU/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0034H10.2" temp_strand="-" temp_description="C02SLe0034H10.2  AC215453.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0034H10 sequenced_by:kribb upload_account_name:korea">
        <position start="7859" stop="6256"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7560" g_stop="7300" g_length="261"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="261" r_length="261" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="7299" i_stop="7232" i_length="68">
            <donor d_prob="0.940" d_score="1.00"/>
            <acceptor a_prob="0.845" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="7231" g_stop="6982" g_length="250"/>
          <reference_exon_boundary r_type="cDNA" r_start="262" r_stop="511" r_length="250" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="6981" i_stop="6787" i_length="195">
            <donor d_prob="0.626" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="6786" g_stop="6556" g_length="231"/>
          <reference_exon_boundary r_type="cDNA" r_start="512" r_stop="743" r_length="232" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0034H10.2" gen_strand="-" ref_id="SGN-U586161" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>742</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0034H10.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U586161" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7560" e_stop="7300"/>
          <exon e_start="7231" e_stop="6982"/>
          <exon e_start="6786" e_stop="6556"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCCAAGACATGGAAATCCCCAAACTTACACTTGTTTCCTCTTCCATCCAAAACCAAAACACAGCCCTCAATAATAATAACTCCAAAAGCCTATAATAATGAAGATAACAATTCAACAGCAGGAAAAATCAAACGAATGGTACTTACTCAACAAGGAAGAACCAAACTAAACATTTTACCAGACAAGGAATTTTATGCCTATCCAAGATTCGTCACACACGTCGATGATCGTTTCATTTCCAATTTAACCGATCTTTACAGGTAACGGTGTCAAAATTAAGTTCAAATATGTTATTGATTAATTTGACTCCCCTGCGCTGTTTTTATAGGAAATGTTTGAAACCTGAATTTGAAATTCTTGACCTTATGAGCTCATGGGTCAGTCATTTACCACAAGAAGTGAAGTACAAAAAGGTGGTTGGTCATGGACTTAATGCCCAAGAGCTAGCAAAAAATCCCAAATTGGATTATTTCTTTGTGAGGGATTTGAATGAAGATGAGAAATTTGAGTTTGAAAATTGTAGTTTTGATGCTGTTTTATGCACTGTCAGTGTGCAGTATCTTCAACAGCCTGAGAAGGTAACTTAATTAGATGATAAAGAGAATCAAGTGTCACCACAACCACATAAACATTGTTGCAAAAATGTGTGGTTGGTTATAAGCCAAACAATATAGTGATAAGGTTATATTATTAACTAAATTTTGCATTAAGAACACAATGTTTAGTTTCTATTTTGATCATTGTGTTACTAATACAATGTTATTAAATTTCAGGTTTTCGCGGAAGTATTTCGAATTCTAAGACCTGGAGGAGTGTTTATTGTAAGTTTCAGTAACAGATTGTTCTACGATAAAGCAATTAGTGCCTGGAGGGACAGTACAGGATAC-GGGAGAGTGCAACTTGTGGTACAATATTTTCAATGTATTAAGGGATTTACAGAGCCACAAGTGATTCGTAAATTACCAACTAATGATGATCAACAAAATAAATCACCTCTCAGTAAA</genome_strand>
        <mrna_strand>GCCCAAGACATGGAAATCCCCAAACTTACACTTGTTTCCTCTTCCATCCAAAACCAAAACACAGCCCTCAATAATAATAACTCCAAAAGCCTATAATAATGAAGATAACAATTCAACAGCAGGAAAAATCAAACGAATGGTACTTACTCAACAAGGAAGAACCAAACTAAACATTTTACCAGACAAGGAATTTTATGCCTATCCAAGATTCGTCACACACGTCGATGATCGTTTCATTTCCAATTTAACCGATCTTTACAG....................................................................GAAATGTTTGAAACCTGAATTTGAAATTCTTGACCTTATGAGCTCATGGGTCAGTCATTTACCACAAGAAGTGAAGTACAAAAAGGTGGTTGGTCATGGACTTAATGCCCAAGAGCTAGCAAAAAATCCCAAATTGGATTATTTCTTTGTGAGGGATTTGAATGAAGATGAGAAATTTGAGTTTGAAAATTGTAGTTTTGATGCTGTTTTATGCACTGTCAGTGTGCAGTATCTTCAACAGCCTGAGAAG...................................................................................................................................................................................................GTTTTCGCGGAAGTATTTCGAATTCTAAGACCTGGAGGAGTGTTTATTGTAAGTTTCAGTAACAGATTGTTCTACGATAAAGCAATTAGTGCCTGGAGGGACAGTACAGGATACGGGGAGAGTGCAACTTGTGGTACAATATTTTCAATGTATTAAGGGATTTACAGAGCCACAAGTGATTCGTAAATTACCAACTAATGATGATCAACANAATAAATCACCTCTCAGTAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0034H10-9CaQU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U586160" ref_strand="+" ref_description="SGN-U586160 Tomato 200607#2 [3 ESTs aligned] (*GB) gi|217073308|gb|ACJ85013.1| (e_value=8e-36) unknown; (*ATH) AT3G01660.1 (e_value=1e-35) | Symbol: None | expressed protein, similar to putative protein GB:CAB45319 (Arabidopsis thaliana) | chr3:245485-246439 FORWARD | Aliases: F4P13.20, F4P13_20; ">
      <seq>cttgattctctttatcatctaattaagttaccttctcaggctgttgaagatactgcacactgacagtgcataaaacagcatcaaaactacaattttcaaactcaaatttctcatcttcattcaaatccctcacaaagaaataatccaatttgggattttttgctagctcttgggcattaagtccatgaccaaccacctttttgtacttcacttcttgtggtaaatgactgacccatgagctcataaggtcaagaatttcaaattcaggtttcaaacatttcctataaaaacagcgcaggggagtcaaattaatcaataacatatttgaacttaattttgacaccgttacctgtaaagatcggttaaattggaaatgaaacgatcatcgacgtgtgtgacgaatcttggataggcataaaattccttgtctggtaaaatgtttagtttggttcttccttggtgagtaagtaccattcgtttgatttttcctgctgttgaattgttatcttcattattataggcttttggagttattattattgagggctgtggtttggttttggatggaaaaagaaacaaatgtaagtttggggatttccatgtcttgggatgggc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0034H10-9CaQU/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0034H10.2" temp_strand="+" temp_description="C02SLe0034H10.2  AC215453.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0034H10 sequenced_by:kribb upload_account_name:korea">
        <position start="6651" stop="7864"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="6951" g_stop="7565" g_length="615"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="615" r_length="615" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0034H10.2" gen_strand="+" ref_id="SGN-U586160" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>615</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0034H10.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U586160" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="6951" e_stop="7565"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTGATTCTCTTTATCATCTAATTAAGTTACCTTCTCAGGCTGTTGAAGATACTGCACACTGACAGTGCATAAAACAGCATCAAAACTACAATTTTCAAACTCAAATTTCTCATCTTCATTCAAATCCCTCACAAAGAAATAATCCAATTTGGGATTTTTTGCTAGCTCTTGGGCATTAAGTCCATGACCAACCACCTTTTTGTACTTCACTTCTTGTGGTAAATGACTGACCCATGAGCTCATAAGGTCAAGAATTTCAAATTCAGGTTTCAAACATTTCCTATAAAAACAGCGCAGGGGAGTCAAATTAATCAATAACATATTTGAACTTAATTTTGACACCGTTACCTGTAAAGATCGGTTAAATTGGAAATGAAACGATCATCGACGTGTGTGACGAATCTTGGATAGGCATAAAATTCCTTGTCTGGTAAAATGTTTAGTTTGGTTCTTCCTTGTTGAGTAAGTACCATTCGTTTGATTTTTCCTGCTGTTGAATTGTTATCTTCATTATTATAGGCTTTTGGAGTTATTATTATTGAGGGCTGTGTTTTGGTTTTGGATGGAAGAGGAAACAAGTGTAAGTTTGGGGATTTCCATGTCTTGGGATGGGA</genome_strand>
        <mrna_strand>CTTGATTCTCTTTATCATCTAATTAAGTTACCTTCTCAGGCTGTTGAAGATACTGCACACTGACAGTGCATAAAACAGCATCAAAACTACAATTTTCAAACTCAAATTTCTCATCTTCATTCAAATCCCTCACAAAGAAATAATCCAATTTGGGATTTTTTGCTAGCTCTTGGGCATTAAGTCCATGACCAACCACCTTTTTGTACTTCACTTCTTGTGGTAAATGACTGACCCATGAGCTCATAAGGTCAAGAATTTCAAATTCAGGTTTCAAACATTTCCTATAAAAACAGCGCAGGGGAGTCAAATTAATCAATAACATATTTGAACTTAATTTTGACACCGTTACCTGTAAAGATCGGTTAAATTGGAAATGAAACGATCATCGACGTGTGTGACGAATCTTGGATAGGCATAAAATTCCTTGTCTGGTAAAATGTTTAGTTTGGTTCTTCCTTGGTGAGTAAGTACCATTCGTTTGATTTTTCCTGCTGTTGAATTGTTATCTTCATTATTATAGGCTTTTGGAGTTATTATTATTGAGGGCTGTGGTTTGGTTTTGGATGGAAAAAGAAACAAATGTAAGTTTGGGGATTTCCATGTCTTGGGATGGGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0034H10-9CaQU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U573044" ref_strand="+" ref_description="SGN-U573044 Tomato 200607#2 [25 ESTs aligned] (*GB) gi|118481778|gb|ABK92828.1| (e_value=2e-108) unknown; (*ATH) AT4G35860.1 (e_value=1e-109) | Symbol: None | Ras-related GTP-binding protein, putative, similar to Rab2-like GTP-binding protein GI:1765896 from (Arabidopsis thaliana) | chr4:16986843-16989041 REVERSE | Aliases: F4B14.130, F4B14_130; (*SWP) sp|P49104|RAB2B_MAIZE (e_value=2e-97) Ras-related protein Rab-2-B OS=Zea mays GN=RAB2B; ">
      <seq>tttgcttatatacgtttccttataaaatctgtatacaaaatttggacgtcacctcttacattacattactttactttattttagtgttatccgtttccccctctctctcgtctttgctttcttcatacttacgttgctcatctttgactcttttccaactgtcttaacttctccgactgcataactctgctccggcgcttctcttcatcggaaaatgtcttacgattatctcttcaagtacataatcatcggagatacaggagtcggaaaatcgtgtctgctgctgcaattcacagacaagaggtttcagccagtgcatgatctcaccattggagtcgagtttggggctcgtatggtcaccattgacggcaagcctattaaacttcaaatttgggacactgctgggcaggaatctttcagatccatcaccaggtcatattacagaggagcagctggcgcacttctggtttatgacatcaccaggagagagacatttaatcacctagccagctggcttgaagatgctaggcagcatgcaaatccaaatatgactataatgctggtaggaaataagagtgatctgtctcatcgaagagctgtcagtaaagaggagggagaacaatttgcaaaagaaaatgggcttttgtttcttgaggcgtctgctagaactgctcaaagtgttgaggaggcctttatacagactgctgccaagatacttcaaaagatccaagaaggtgtttttgatgtctccaacgagtcatctggaatcaaggttggttatgggcgtacgcaaggtccagctggtccaagggatggagcagttgctcaaagaggtggatgctgcagctagtgtacaatagggttccaaattgtaatgatactcatgaacttgctttggtccctcactagacttgtacagctcaaattcagttgactcaatttactcatattattcagagtaaaataggttcttaaggagctgttaattccagtacatgtggtgtttgagttgcattcaatgttaatatagtacatggattgttgtttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0034H10-9CaQU/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0034H10.2" temp_strand="+" temp_description="C02SLe0034H10.2  AC215453.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0034H10 sequenced_by:kribb upload_account_name:korea">
        <position start="15867" stop="21029"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16167" g_stop="16426" g_length="260"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="260" r_length="260" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16427" i_stop="16531" i_length="105">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16532" g_stop="16671" g_length="140"/>
          <reference_exon_boundary r_type="cDNA" r_start="261" r_stop="400" r_length="140" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="16672" i_stop="18336" i_length="1665">
            <donor d_prob="0.963" d_score="1.00"/>
            <acceptor a_prob="0.916" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="18337" g_stop="18419" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="401" r_stop="483" r_length="83" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="18420" i_stop="19716" i_length="1297">
            <donor d_prob="0.942" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="19717" g_stop="19921" g_length="205"/>
          <reference_exon_boundary r_type="cDNA" r_start="484" r_stop="688" r_length="205" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="19922" i_stop="20023" i_length="102">
            <donor d_prob="0.913" d_score="1.00"/>
            <acceptor a_prob="0.973" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="20024" g_stop="20092" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="689" r_stop="757" r_length="69" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="20093" i_stop="20438" i_length="346">
            <donor d_prob="0.901" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="20439" g_stop="20729" g_length="291"/>
          <reference_exon_boundary r_type="cDNA" r_start="758" r_stop="1048" r_length="291" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0034H10.2" gen_strand="+" ref_id="SGN-U573044" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>1048</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0034H10.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U573044" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16167" e_stop="16426"/>
          <exon e_start="16532" e_stop="16671"/>
          <exon e_start="18337" e_stop="18419"/>
          <exon e_start="19717" e_stop="19921"/>
          <exon e_start="20024" e_stop="20092"/>
          <exon e_start="20439" e_stop="20729"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGCTTATATACGTTTCCTTATAAAATCTGTATACAAAATTTGGACGTCACCTCTTACATTACATTACTTTACTTTATTTTAGTGTTATCCGTTTCCCCCTCTCTCTCGTCTTTGCTTTCTTCATACTTACGTTGCTCATCTTTGACTCTTTTCCAACTGTCTTAACTTCTCCGACTGCATAACTCTGCTCCGGCGCTTCTCTTCATCGGAAAATGTCTTACGATTATCTCTTCAAGTACATAATCATCGGAGATACAGGTTAAACTCTCTTTCATCTCTTCATTTTCTTTTTTGTCTAGTTTACTCTGCTTTTTGTCTATTTTGAAACCCTAATTGACCGTACGGATTACTTTATTTCAACAGGAGTCGGAAAATCGTGTCTGCTGCTGCAATTCACAGACAAGAGGTTTCAGCCAGTGCATGATCTCACCATTGGAGTCGAGTTTGGGGCTCGTATGGTCACCATTGACGGCAAGCCTATTAAACTTCAAATTTGGGACACTGTAATAGATTTTTCCGCTTGTTCTCTCACCAGTTAGCTTTAAATTTTGACTGTTTGATATCGCATTGAATACTTGGTCGCTGTACACGTATCTATAATTAGAAATCATACGTCATTAAGTACGGTAACATTTGAGAAAAGTACACACTCATCAGAAGTCTCTATTTAACTTGGTGCTGCTCTGGTTACTGTTCTTCGGCTCTTGTTCTCCTCTGTAATCTCCACAAATCGGATTGCTATCAGTTTTCCTATCCTTGCCTCAAAGTAAATAGACAAAGGGAAAACTAAGTATATATTAAACGTCAATGCTTTTAGGAAAATCCTTTAGCTGTGTAAAGTGAACTAGGTACAGTCTTTTTGAGTCCTCTAACAATAGGACTAGCAAACTTGCTGACCATGTCTCTTGGTCTCTATGAGTAGAACTTTGACATCAACTCTCTCTGTCTTTGCTCCCGGTCAAACTTAGTGAAAATTGCACCATCATTGACACTTTAATGCCAAAGTTTTTAAGGATAAAAAATTTGAACTATCATACATATCTGAAGAAATGGAACGGTAGGTGCTAGGTGATGCAGGATTGCACGAGTGCCAGTCTCTGCACTCAACTGGGACATGATGCTGGTACAAACATTTTAAGGTTGAATGGTAAATTTGCAATTGAGTATTATTTTTAAGAAAAATTGGAGTTAAGTTTTTAATTTCCTATGTTTAATTTGTGTTCATCAATGAATAGTTGTTGGATCATCTTATGTAGAGTTAATTACATTTCCTTGATTTAATCCAAACTTGAGTACCTATGGCCTAGTCCTGCATAGTTTTAGGGGGAAGTGCTAGGTAAAGTTCTCAGGCTGTTTGGTCGCTTTTCATTACGAGTAGGAAGACATGTTCCGAGATGGTTGTTTGTTTGTGATCTAGTTTTTATTTCACATGTCCATAGCATTTTTTTGATAAGGACGTGGCCATAGTGTTTCATGCATTCTGCATAGGTGATATACAGTTAGAAGCCATACAACTTACTCATGATCTTAAATAAGTTGCACAGTCAGATCAAGGAGGGGGGATCTGCGAATATTGGGTTGGGGTTTGAGTCACCAAGGGTACAAAGTGGCATTGGTACTCGCGGGTTGGAATTTATTTTTTGGAGTAGGGGAGAGTTGGGGGTAGGGGTGTGGGCGTTTTTACCATGTCAACTATGTGTGCGTGATCAAATTTAAGTATGATGCTACACATTTCCTGTCTAACCCTTGGTTGTTCGTTCTTCAAACAATCAACTTAACATAAACTGATGTTAAACTGACGGCTATCTCTATGTTAAAAGACAACCTATTTGATGCTTGAACTTCTATCCTTTTTCACTTTTTGATGGTCAAGTTGCTTTAAACTGCTGTCATATTACATTAAATCTAAGAAACTACATGTATGTATTATGAGGTGTTTCGCTTTAAACTGCTGTCATATTACATTAACTCTTGGTCAAATATTGCATTTTCCAACCCTTGGATTGTGGAAGAACGGACAAAAGCTATGCAATTAGGGGATATACATGTACTTAATAATTGTGGATCACTCAGTATCTTTTTTATTCAAATTAATTTCTTATTCTATCAGCATTTCAATTACAGTGATATATAACTCTCCATCCCTCCATGGACCTTTCTTTCTCTAGGCTGGGCAGGAATCTTTCAGATCCATCACCAGGTCATATTACAGAGGAGCAGCTGGCGCACTTCTGGTTTATGACATCACCAGGTATAATCCCATTGCTGTTTGTTGTACACATAAACCTATGATAGCTCACACGTAAACTTGCATTTGCTTCTTTGAAAAATCTGGTTATTATCAGCTGAGAATCTTGTTGTAGGAGAAAATTTTACTTTTTCCCTTTTTATATTTTCTTTTGGGGGGCTTTTGCCTTTTCAATTGCCAAATCCTCTTGCACAGAAGCCCTGCTTTACTGTAGAGACAAAAATTCTTGAGATGTCAAGCTGGTCTCTGATCGTATGAAACACTAATTGAGGATTCCTGTAGACATTCCACTTCCCTTCAAGTCATTAATATGCAGAAATAAGATATTTAAAACTTTAACTTGGGATGTGTTTGGTATGGAGGAAAATATTTTCTATTTAGGGAACTTTTTTTCCTAGAGACGTGTTATCTAAAAACATTGACCAACCCTCCATTGCAAACACAGCGAAAAAGTTTTTTTTTTTTTCAATTTTCCATGTTTGGTTGGTCGAAGTTTTGGAAAATTTTCTCTAGGAAACAAATTCTTCAAAAATGAGGAAAGTGACTTCCATGATGGAAGTGGCATACCACACATATTGCACCCTCCCACCCTCCAACAGGCCCCACCCCCATAGTCCCTCATCCCCTGCCCCTCTACCCCAACCTCCTTTAGTATTTTCCTATATAATATACCAAATGCTTTTGGATAATATTTTTTTGCATATATACCAAATGCAAGAAAATAAGTATAAAACCTCACGTATTTTCTATGGAAAACATCCCCTCCCTACCAAACACACCATCTTGTGGACTAAATGGGCAATACTTTTGTTGTTGCAACATTGATTTGATGAACTTTACTAATCATTCCAATTGCTGTAGTTCACCGAAAGTGACACAAGTAACTTTAGAATTTTTGGCTGGACATGGAAATTATAAGTAGGTAGCATATAAATTGTATGAACTAATGAAGTGTGTGCATTATTGGTGTATCATGTACATATTCTAGCAGATTGTAATTGTAATAAGAGAAGTATGTTCGGTTTTTTTTACATAATATTGGATTCTTGGAGTAAAATTATACCGACAAGTTGAATAAATGGAAACTGGTAACTTGACAGGGATATTTTCCATCAGATTAGTTAAGTCCATGTGATGATTCTAGCAGAGCACTAGCTCAGTTGTATCAGTACCTATATGATCACATTTACACATCTTGCGGAATGATTGTCTCCGATGGTTCTAGTATTTAATTCTGATTTTCATTTCTTGCATGATTTTTCATCACTTTGTTAAAGCTAGTAATTGTTCTGTTGTCTAGGAGAGAGACATTTAATCACCTAGCCAGCTGGCTTGAAGATGCTAGGCAGCATGCAAATCCAAATATGACTATAATGCTGGTAGGAAATAAGAGTGATCTGTCTCATCGAAGAGCTGTCAGTAAAGAGGAGGGAGAACAATTTGCAAAAGAAAATGGGCTTTTGTTTCTTGAGGCGTCTGCTAGAACTGCTCAAAGTGTTGAGGAGGTATACATATTAGCCGGTGCCCATGGCATCTCTTATCTACAATATCACTTTTATCAAATTCCATTGAAGCTAATTTCTTAAACTAATGCAATGCATTCACAGGCCTTTATACAGACTGCTGCCAAGATACTTCAAAAGATCCAAGAAGGTGTTTTTGATGTCTCCAACGAGGTAAACAGTTAGTTTTCCGCGTAAATGTATGACGAGGCATTTTCATCATTGCTAATTGTACTGCTTTCATGAGCATCTCGTTTTAGAATCTGCATGAGTAACTAAAATAGGATAAGATCGTTTGTTTGCAAGCTCTGGATATGGGCAACTTAGATGGGTGAAATCGTTGTTTAGTTGGTTGTTAACTTCCTATAAATGGAGGGGTAAGTTTTAGTGGGCCTGAAATTGGGGTGTCCCAACCAAGGAGTTGTTTCGGATCTGTACACAGTTATACTTTTTTTATCCCCTTGGAATGAACGTTATCATTGATAAATTTTCTAACATACCTCACTTGCTACTGTTGTAGTCATCTGGAATCAAGGTTGGTTATGGGCGTACGCAAGGTCCAGCTGGTCCAAGGGATGGAGCAGTTGCTCAAAGAGGTGGATGCTGCAGCTAGTGTACAATAGGGTTCCAAATTGTAATGATACTCATGAACTTGCTTTGGTCCCTCACTAGACTTGTACAGCTCAAATTCAGTTGACTCAATTTACTCATATTATTCAGAGTAAAATAGGTTCTTAAGGAGCTGTTAATTCCAGTACATGTGGTGTTTGAGTTGCATTCAATGTTAATATAGTACATGGATTGTTGTTTT</genome_strand>
        <mrna_strand>TTTGCTTATATACGTTTCCTTATAAAATCTGTATACAAAATTTGGACGTCACCTCTTACATTACATTACTTTACTTTATTTTAGTGTTATCCGTTTCCCCCTCTCTCTCGTCTTTGCTTTCTTCATACTTACGTTGCTCATCTTTGACTCTTTTCCAACTGTCTTAACTTCTCCGACTGCATAACTCTGCTCCGGCGCTTCTCTTCATCGGAAAATGTCTTACGATTATCTCTTCAAGTACATAATCATCGGAGATACAG.........................................................................................................GAGTCGGAAAATCGTGTCTGCTGCTGCAATTCACAGACAAGAGGTTTCAGCCAGTGCATGATCTCACCATTGGAGTCGAGTTTGGGGCTCGTATGGTCACCATTGACGGCAAGCCTATTAAACTTCAAATTTGGGACACT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGGGCAGGAATCTTTCAGATCCATCACCAGGTCATATTACAGAGGAGCAGCTGGCGCACTTCTGGTTTATGACATCACCAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAGAGACATTTAATCACCTAGCCAGCTGGCTTGAAGATGCTAGGCAGCATGCAAATCCAAATATGACTATAATGCTGGTAGGAAATAAGAGTGATCTGTCTCATCGAAGAGCTGTCAGTAAAGAGGAGGGAGAACAATTTGCAAAAGAAAATGGGCTTTTGTTTCTTGAGGCGTCTGCTAGAACTGCTCAAAGTGTTGAGGAG......................................................................................................GCCTTTATACAGACTGCTGCCAAGATACTTCAAAAGATCCAAGAAGGTGTTTTTGATGTCTCCAACGAG..........................................................................................................................................................................................................................................................................................................................................................TCATCTGGAATCAAGGTTGGTTATGGGCGTACGCAAGGTCCAGCTGGTCCAAGGGATGGAGCAGTTGCTCAAAGAGGTGGATGCTGCAGCTAGTGTACAATAGGGTTCCAAATTGTAATGATACTCATGAACTTGCTTTGGTCCCTCACTAGACTTGTACAGCTCAAATTCAGTTGACTCAATTTACTCATATTATTCAGAGTAAAATAGGTTCTTAAGGAGCTGTTAATTCCAGTACATGTGGTGTTTGAGTTGCATTCAATGTTAATATAGTACATGGATTGTTGTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0034H10-9CaQU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U577064" ref_strand="+" ref_description="SGN-U577064 Tomato 200607#2 [2 ESTs aligned] ">
      <seq>cagacatgttgtgagtgtgggagagcgcttgagaattgcccaatatgtcgaagttcaattcaaaccagaataaagctctattgagctgcttgttttgccctgattccttttgctattccaacctgcaatgctttttgatcagtttggatgtgaaaccatggtgatgaagctgatttttttatttgttggatatggctttggccttgtgctaatgcaaatttccttctgtacatggcttggttcttgtttgtgttttgcttttgccaaattactttacttccaactatagaagcataagatccctagattcaaattgtctgtaaatcaactgtttattgtgcagtgacctttaaagagtcttgtgctgatactagacctaatacattgccatttgtcaatatgtaccgactattttccaccagagaatgtgcaaacaaagaagaatgtgattcaggaacaagaatatttcataagagcgagcgagaaggtgatttctatccgatcattttggtggacacgattatttggtatatgttgcttatgagaggtaagcaggaagggtctagtggtcgatgaagtgaggagaatagcgagtttttgggtttacacctcagcggaaacaaaagtagaatgggnattgattgtttctcattttgtccaagttttaagtggatatagtattagcaagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0034H10-9CaQU/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0034H10.2" temp_strand="-" temp_description="C02SLe0034H10.2  AC215453.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0034H10 sequenced_by:kribb upload_account_name:korea">
        <position start="24646" stop="23359"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="24346" g_stop="23659" g_length="688"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="689" r_length="689" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0034H10.2" gen_strand="-" ref_id="SGN-U577064" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>688</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0034H10.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U577064" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="24346" e_stop="23659"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGACATGTTGTGAGTGTGGGAGAGCGCTTGAGAATTGCCCAATATGTCGAAGTTCAATTCAAACCAGAATAAAGCTCTATTGAGCTGCTTGTTTTGCCCTGATTCCTTTTGCTATTCCAACCTGCAATGCTTTTTGATCAGTTTGGATGTGAAACCATGGTGATGAAGCTGATTTTTTTATTTGTTGGATATGGCTTTGGCCTTGTGCTAATGCAAATTTCCTTCTGTACATGGCTTGGTTCTTGTTTGTGTTTTGCTTTTGCCAAATTACTTTACTTCCAACTATAGAAGCATAAGATCCCTAGATTCAAATTGTCTGTAAATCAACTGTTTATTGTGCAGTGACCTTTAAAGAGTCTTGTGCTGATACTAGACCTAATACATTGCCATTTGTCAATATGTACCGACTATTTTCCACCAGAGAATGTGCAAACAAAGAAGAATGTGATTCAGGAACAAGAATATTTCATAAGAGCGAGCGAGAAGGTGATTTCTATCCGATCATTTTGGTGGACACGATTATTTGGTATATGTTGCTTATGAGAGGTAAGCAGGAGGGGTCTAGTGGTCGATGAAGTGAGGAGAATAGCGAGTTTTTGGGTTTACACCTCAGCGGAAACAAAAGTAGTAT-GGTATTGATTGTTTCTCATTTTGTCCAAGTTTTAAGTGGATATAGTATTAGCAAGC</genome_strand>
        <mrna_strand>CAGACATGTTGTGAGTGTGGGAGAGCGCTTGAGAATTGCCCAATATGTCGAAGTTCAATTCAAACCAGAATAAAGCTCTATTGAGCTGCTTGTTTTGCCCTGATTCCTTTTGCTATTCCAACCTGCAATGCTTTTTGATCAGTTTGGATGTGAAACCATGGTGATGAAGCTGATTTTTTTATTTGTTGGATATGGCTTTGGCCTTGTGCTAATGCAAATTTCCTTCTGTACATGGCTTGGTTCTTGTTTGTGTTTTGCTTTTGCCAAATTACTTTACTTCCAACTATAGAAGCATAAGATCCCTAGATTCAAATTGTCTGTAAATCAACTGTTTATTGTGCAGTGACCTTTAAAGAGTCTTGTGCTGATACTAGACCTAATACATTGCCATTTGTCAATATGTACCGACTATTTTCCACCAGAGAATGTGCAAACAAAGAAGAATGTGATTCAGGAACAAGAATATTTCATAAGAGCGAGCGAGAAGGTGATTTCTATCCGATCATTTTGGTGGACACGATTATTTGGTATATGTTGCTTATGAGAGGTAAGCAGGAAGGGTCTAGTGGTCGATGAAGTGAGGAGAATAGCGAGTTTTTGGGTTTACACCTCAGCGGAAACAAAAGTAGAATGGGNATTGATTGTTTCTCATTTTGTCCAAGTTTTAAGTGGATATAGTATTAGCAAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0034H10-9CaQU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U577065" ref_strand="+" ref_description="SGN-U577065 Tomato 200607#2 [35 ESTs aligned] (*GB) gi|60459371|gb|AAX20031.1| (e_value=0) RING-finger; (*ATH) AT5G14420.3 (e_value=3e-165) | Symbol: None | copine-related, low similarity to SP:Q99829 Copine I {Homo sapiens} | chr5:4648115-4650793 REVERSE | Aliases: None; (*SWP) sp|Q9LY87|RGLG2_ARATH (e_value=3e-164) E3 ubiquitin-protein ligase RGLG2 OS=Arabidopsis thaliana GN=RGLG2; ">
      <seq>aaaaaacccaactttttcatccgtgacctaacgacgaaacttccatgtgtctacacaaaacttttaactcacatactgttttaattatatagaaaaaaaaaaagtgtattccctttctgatactgcaattttttttcaaacagattcgattcgatccaccattagaatccaataatcacaagtttttaaaccccacaactccaattgctgcacatcctctgtttttaagataagttgactttgatgggtggcaagagttcaagagaggatagttggaggcaagcttcatcgactcgatcttcctcttggaatcaatacgattatcctcaaactgcttatcctcaagatagttacagttactcacagcagacggctgttccttcttatgcaccaccaccaccatcccaacagaattatcccccacagcaccaacacaattattcttcacaaccccaacagaattatgcttctcatgaacatgaatctcggactcatactcatgctccacgaccaaggcttgatcggagatactcgaggattgcagacaattataattccctggatgaggtgactgaagcccttgcacgagctggtttggagtcttcgaatcttattgtgggtattgatttcaccaagagtaatgaatggacaggtaagaggtcttttagtaatcggagtctacatcacattgggcagaatttgaacccatatgagcaagccatttccataattggaaaaaccttagcggcatttgatgaggataacttgattccttgttttggattcggagatgcatcaactcatgatcaagatgtattcagtttctttcccaatgaaagattttgtaatggttttgaggaagttctgtctcgttacagagaaattgtcccccagctgaagcttgcaggaccaacatcattcgccccggtcattgaaatggccatgacaatagttgagcagagtggaggccagtaccatgttctattaatcattgcagatgggcaggtaactagaagtgttgatactggccgtggacaattaagtccgcaggagcagaaaacggtggatgcaatcgtacaagcaagcaagtttcccttgtcaattatactggttggggttggcgatggaccgtgggatatgatgaaggaatttgatgataatattcctgctagggacttcgataatttccagttcgtcaatttcacggacataatggccaaaaatgtgcctcaatctcgaaaggagacggagtttgcgctttcagcattgatggaaatcccttcacaatacaaagcgacgatggaacttaacttactgggtggacaaagtggaaaatctgtcaatagggtagctcttcctcctcctatgtatggggcaagttctgtcggtggttcaaagacctcacatgcaccaagttttcagcagcctgcaagctcgtattatggttatggaagccctgcagatgcagaaccacattttcagccgacttcaagttcttactacgacagtgctcgcccagttgacaatgctccatctgctccgagttcgccctacactgctcccagttctacctatgacaatcaggtttgccccatttgtcttactaacccaaaagacatggcctttggctgtgggcatcagacatgttgtgagtgtgggagagcgcttgagaattgcccaatatgtcgaagttcaattcaaaccagaataaagctctattgagctgcttgttttgccctgattccttttgctattccaacctgcaatgctttttgatcagtttggatgtgaaaccatggtgatgaagctgatttttttatttgttggatatggctttggccttgtgctaatgcaaatttccttctgtacatggcttggttcttgtttgtgttttgcttttgccaaattactttacttccaactatagaagcataagatccctagattcaaattgtctgtaaatcaactgtttattgtgcagtgacctttaaagagtcttgtgctgatactagacctaatacattgccatttgtcaaaaaaaaaaaaaaaaaactcgagactagttctccctcgaatccatcgccgtcaaatcacagcttcttcttcgccggcggcggctatggcgtgtgtgcctaattcatcgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0034H10-9CaQU/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0034H10.2" temp_strand="-" temp_description="C02SLe0034H10.2  AC215453.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0034H10 sequenced_by:kribb upload_account_name:korea">
        <position start="28707" stop="23647"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28407" g_stop="28179" g_length="229"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="229" r_length="229" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="28178" i_stop="27633" i_length="546">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.626" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="27632" g_stop="27295" g_length="338"/>
          <reference_exon_boundary r_type="cDNA" r_start="230" r_stop="567" r_length="338" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="27294" i_stop="26431" i_length="864">
            <donor d_prob="0.868" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="26430" g_stop="26346" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="568" r_stop="652" r_length="85" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="26345" i_stop="26259" i_length="87">
            <donor d_prob="0.933" d_score="1.00"/>
            <acceptor a_prob="0.628" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="26258" g_stop="26118" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="653" r_stop="793" r_length="141" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="26117" i_stop="26019" i_length="99">
            <donor d_prob="0.953" d_score="1.00"/>
            <acceptor a_prob="0.843" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="26018" g_stop="25905" g_length="114"/>
          <reference_exon_boundary r_type="cDNA" r_start="794" r_stop="907" r_length="114" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="25904" i_stop="25820" i_length="85">
            <donor d_prob="0.722" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="25819" g_stop="25722" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="908" r_stop="1005" r_length="98" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="25721" i_stop="25533" i_length="189">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="25532" g_stop="25453" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="1006" r_stop="1085" r_length="80" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="25452" i_stop="25329" i_length="124">
            <donor d_prob="0.977" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="25328" g_stop="25223" g_length="106"/>
          <reference_exon_boundary r_type="cDNA" r_start="1086" r_stop="1191" r_length="106" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="25222" i_stop="25130" i_length="93">
            <donor d_prob="0.180" d_score="1.00"/>
            <acceptor a_prob="0.939" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="25129" g_stop="25002" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="1192" r_stop="1319" r_length="128" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="25001" i_stop="24883" i_length="119">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="24882" g_stop="24618" g_length="265"/>
          <reference_exon_boundary r_type="cDNA" r_start="1320" r_stop="1584" r_length="265" r_score="1.000"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="24617" i_stop="24493" i_length="125">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="24492" g_stop="24436" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="1585" r_stop="1641" r_length="57" r_score="1.000"/>
        </exon>
        <intron i_serial="11">
          <gDNA_intron_boundary i_start="24435" i_stop="24344" i_length="92">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="12">
          <gDNA_exon_boundary g_start="24343" g_stop="23946" g_length="398"/>
          <reference_exon_boundary r_type="cDNA" r_start="1642" r_stop="2039" r_length="398" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0034H10.2" gen_strand="-" ref_id="SGN-U577065" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>2039</cumulative_length_of_scored_exons>
        <coverage percentage="0.950" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0034H10.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U577065" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28407" e_stop="28179"/>
          <exon e_start="27632" e_stop="27295"/>
          <exon e_start="26430" e_stop="26346"/>
          <exon e_start="26258" e_stop="26118"/>
          <exon e_start="26018" e_stop="25905"/>
          <exon e_start="25819" e_stop="25722"/>
          <exon e_start="25532" e_stop="25453"/>
          <exon e_start="25328" e_stop="25223"/>
          <exon e_start="25129" e_stop="25002"/>
          <exon e_start="24882" e_stop="24618"/>
          <exon e_start="24492" e_stop="24436"/>
          <exon e_start="24343" e_stop="23946"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAAACCCAACTTTTTCATCCGTGACCTAACGACGAAACTTCCATGTGTCTACACAAAACTTTTAACTCACATACTGTTTTAATTATATAGAAAAAAAAAAAGTGTATTCCCTTTCTGATACTGCAATTTTTTTTCAAACAGATTCGATTCGATCCACCATTAGAATCCAATAATCACAAGTTTTTAAACCCCACAACTCCAATTGCTGCACATCCTCTGTTTTTAAGGTATGTGGTTTGTCCCTCTCTATTTACCCTTTTGACTCTTCAATTTTCGATTGAATAATGTGAAACCCGTTGCTTAAATTGACTGTCATTTTCTGGGTTTTTTTTTAAAAACTTCCCATGGAAGTTATGGTTGATTTTACGTCTTGGGTTTGTATTATTTTAGTGTTAACGTGTCTTCTCTCTTGTTTCTTACTGTTATCCTGCTGTCGTAATTGCGTAGCTTGTAAAAGGACAATGTAGAAGAGCCAAAGTCTATATTGAGTCGGTTTTGAATGATTACAAGTCTCAATTTGATAGCCGCCTTTCTCTTCTTAACCTGCCCCTGCCGCGTGAAGTAATATTCAAGATTCACAACCTATCCAGAAACTTCAGTTGTTTGTAAATATAAAAAACCATTCTTGATAACAGATTCAGATTATTGGTGTATCATTTGGGTTTTTTTTTTTGATTGATTTTGACAGGCCTTTTTGATTGATTGTATTGTGGAACAAAACAAAAAAGTTGTCTTTTTTTCTTTTTGGCTTAAGGGAGTTAGTAATTTTGTAGATAAGTTGACTTTGATGGGTGGCAAGAGTTCAAGAGAGGATAGTTGGAGGCAAGCTTCATCGACTCGATCTTCCTCTTGGAATCAATACGATTATCCTCAAACTGCTTATCCTCAAGATAGTTACAGTTACTCACAGCAGACGGCTGTTCCTTCTTATGCACCACCACCACCATCCCAACAGAATTATCCCCCACAGCACCAACACAATTATTCTTCACAACCCCAACAGAATTATGCTTCTCATGAACATGAATCTCGGACTCATACTCATGCTCCACGACCAAGGCTTGATCGGAGATACTCGAGGATTGCAGACAATTATAATTCCCTGGATGAGGTATGGATTAGAGATAAGTATGAAGCAATTTGGATGTTTTCAGCAATTCTCTATTATTTTTCTGCCAGCCTTTTAGACTTTACTATTAGCATTGTGATTCACTCCATCATAATTCTGAATTTAGTACTTCTAGCGCATGTTGTTTTCATTTCTTCAGTTATCATATTATGTTTTCCTTAGCTACTGCTTTCATTACCATATAAAACTGCTTTGAGATGTGCTACTTGAGTCGAAGGTCTCAAGGAAATAGCTCGTTGTAGAGTAACGTTTGCTTACACTCTACCTATCTAGACCCACTTGTGGGATTATACGGAATATATTATTGTTGTAGTACTACTTCTAATGCCTACATATTATGCTGTATGCAGTTGCATTCACCCATTAATGTTATTAAGGTATGTCTGACAACTGAATTAGGAAAAGCTATTTAGGAGTAGGGTTATAAATATGGGATGCATGAAGTTTTTATCATCTTAATTTTCTACGTGTGTGCAAGCACTAAAACATCATAGACACTATTTTCAACGATGCTGGAAATAAGACTGCATATGGAAATAGAAGGGGGGAAGGGGGTGAATGATGATAGACCAGATAACTGCCGGAAGATGCTACCTTTGAAAAGCTTTACTTTTTTTAATCTCTCCTACTTCCATAGAGGTGTAATTTTGATTATTGTTAATCTTAATATCAGATGCTTTACTTAACAGATCAAGAGAAGTGGACACTATAAGAACCATAGAATTTTTAAATTTTAACGACCCCCTTTTAAGGACATTGGCTCATGATTTTTCACCTTTTATATATGATAATTTTTTATGATGAAAACACTATGTATGACAAAAATGCAATTTTATTTTTAATCAGGTGACTGAAGCCCTTGCACGAGCTGGTTTGGAGTCTTCGAATCTTATTGTGGGTATTGATTTCACCAAGAGTAATGAATGGACAGGTTAAGTTTTTTTCTTCTGTTTCGTGCCTCTCTGGTCAGTTGCATGCTATGTTTTTCAATAGTCTAAAGTGGGCATATGCTTTTTAGGTAAGAGGTCTTTTAGTAATCGGAGTCTACATCACATTGGGCAGAATTTGAACCCATATGAGCAAGCCATTTCCATAATTGGAAAAACCTTAGCGGCATTTGATGAGGATAACTTGATTCCTTGTTTTGGATTCGGAGATGGTAACTCTATGAGCCTTCTCTTTTTAATCCATAAAACTTCTCTTCGGATATGCTCAGTACGAGATTAATGTTTTGTTCATGTGGATAATTTTTTGACAGCATCAACTCATGATCAAGATGTATTCAGTTTCTTTCCCAATGAAAGATTTTGTAATGGTTTTGAGGAAGTTCTGTCTCGTTACAGAGAAATTGTCCCCCAGCTGAAGCTTGCAGGTTTAAATTCTACTACAACCAATTCTACTGCTTTAGACTCAGTAATTGATCCAATTCACTTAGATTCCTTCGCATTTTGTTACAGGACCAACATCATTCGCCCCGGTCATTGAAATGGCCATGACAATAGTTGAGCAGAGTGGAGGCCAGTACCATGTTCTATTAATCATTGCAGATGGGCAGGTAATATGTTTTTATCAATCTACATCTCTGTCTGAATTCAAGACAAGAACAATAACGAATAGTACACTGGCACAGATCAACTTCAACTTTAGTTGCATAGTGCATGAGTTAGTTGGATTTTCTTTTTGGTTGTCATATTTGAGTGTGTTACAACTGTATATTTTAACTGTCATTTCTGTATCTGTTCAGGTAACTAGAAGTGTTGATACTGGCCGTGGACAATTAAGTCCGCAGGAGCAGAAAACGGTGGATGCAATCGTACAAGCAAGGTACTTGCCTCTAGTTTCCCTGTGCTGACTGGCATTCGTATTTGTAAAATCTTTTAGTTCTGTTACATGCTGCTTTTTCATACTTATGCTCAAACTCCACAGTGCATTGTCTTATTTCGTGCAGCAAGTTTCCCTTGTCAATTATACTGGTTGGGGTTGGCGATGGACCGTGGGATATGATGAAGGAATTTGATGATAATATTCCTGCTAGGGACTTCGATAATTTCCAGGTTGGTGGTGGTGGTCTAGATTGTGGTGTCTCTTATTGCTTGTCTAGGAACATTTTCCTTTTATGTGGTTTAATTGCTAATTTATTTTGCTAGTTCGTCAATTTCACGGACATAATGGCCAAAAATGTGCCTCAATCTCGAAAGGAGACGGAGTTTGCGCTTTCAGCATTGATGGAAATCCCTTCACAATACAAAGCGACGATGGAACTTAACTTACTGGGGTCAGATTCCACTCTGCCTATTTATTCATGTATTTCTTTGTTTTCATTCTGCTATACGTCTCTCCTGACCTCCCCTGTCAAGTTGTAGGTGATGACATATTCTAATTTCTTAATTGCAGTGGACAAAGTGGAAAATCTGTCAATAGGGTAGCTCTTCCTCCTCCTATGTATGGGGCAAGTTCTGTCGGTGGTTCAAAGACCTCACATGCACCAAGTTTTCAGCAGCCTGCAAGCTCGTATTATGGTTATGGAAGCCCTGCAGATGCAGAACCACATTTTCAGCCGACTTCAAGTTCTTACTACGACAGTGCTCGCCCAGTTGACAATGCTCCATCTGCTCCGAGTTCGCCCTACACTGCTCCCAGTTCTACCTATGACAATCAGGTAAACCATAAACTCACATTTGCTTTATAATGCTGCATTTTTCAATTTCTTTTGATCTTCTGTTGCTGGTTTTACAAATAAACTGTGCGTGTTCTCTGGAATGAATGTTTTCCATCATTGTGCAGGTTTGCCCCATTTGTCTTACTAACCCAAAAGACATGGCCTTTGGCTGTGGGCATCAGGTACCTTTTTTTTCTCCTCCCATTAAGCAGGCCTGATGTTTTGAGGAAATTAAACGTTGTTGTGACTTAACACTGTCGTGTTGCTGATGCAGACATGTTGTGAGTGTGGGAGAGCGCTTGAGAATTGCCCAATATGTCGAAGTTCAATTCAAACCAGAATAAAGCTCTATTGAGCTGCTTGTTTTGCCCTGATTCCTTTTGCTATTCCAACCTGCAATGCTTTTTGATCAGTTTGGATGTGAAACCATGGTGATGAAGCTGATTTTTTTATTTGTTGGATATGGCTTTGGCCTTGTGCTAATGCAAATTTCCTTCTGTACATGGCTTGGTTCTTGTTTGTGTTTTGCTTTTGCCAAATTACTTTACTTCCAACTATAGAAGCATAAGATCCCTAGATTCAAATTGTCTGTAAATCAACTGTTTATTGTGCAGTGACCTTTAAAGAGTCTTGTGCTGATACTAGACCTAATACATTGCCATTTGTCAATAT</genome_strand>
        <mrna_strand>AAAAAACCCAACTTTTTCATCCGTGACCTAACGACGAAACTTCCATGTGTCTACACAAAACTTTTAACTCACATACTGTTTTAATTATATAGAAAAAAAAAAAGTGTATTCCCTTTCTGATACTGCAATTTTTTTTCAAACAGATTCGATTCGATCCACCATTAGAATCCAATAATCACAAGTTTTTAAACCCCACAACTCCAATTGCTGCACATCCTCTGTTTTTAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAAGTTGACTTTGATGGGTGGCAAGAGTTCAAGAGAGGATAGTTGGAGGCAAGCTTCATCGACTCGATCTTCCTCTTGGAATCAATACGATTATCCTCAAACTGCTTATCCTCAAGATAGTTACAGTTACTCACAGCAGACGGCTGTTCCTTCTTATGCACCACCACCACCATCCCAACAGAATTATCCCCCACAGCACCAACACAATTATTCTTCACAACCCCAACAGAATTATGCTTCTCATGAACATGAATCTCGGACTCATACTCATGCTCCACGACCAAGGCTTGATCGGAGATACTCGAGGATTGCAGACAATTATAATTCCCTGGATGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGACTGAAGCCCTTGCACGAGCTGGTTTGGAGTCTTCGAATCTTATTGTGGGTATTGATTTCACCAAGAGTAATGAATGGACAG.......................................................................................GTAAGAGGTCTTTTAGTAATCGGAGTCTACATCACATTGGGCAGAATTTGAACCCATATGAGCAAGCCATTTCCATAATTGGAAAAACCTTAGCGGCATTTGATGAGGATAACTTGATTCCTTGTTTTGGATTCGGAGATG...................................................................................................CATCAACTCATGATCAAGATGTATTCAGTTTCTTTCCCAATGAAAGATTTTGTAATGGTTTTGAGGAAGTTCTGTCTCGTTACAGAGAAATTGTCCCCCAGCTGAAGCTTGCAG.....................................................................................GACCAACATCATTCGCCCCGGTCATTGAAATGGCCATGACAATAGTTGAGCAGAGTGGAGGCCAGTACCATGTTCTATTAATCATTGCAGATGGGCAG.............................................................................................................................................................................................GTAACTAGAAGTGTTGATACTGGCCGTGGACAATTAAGTCCGCAGGAGCAGAAAACGGTGGATGCAATCGTACAAGCAAG............................................................................................................................CAAGTTTCCCTTGTCAATTATACTGGTTGGGGTTGGCGATGGACCGTGGGATATGATGAAGGAATTTGATGATAATATTCCTGCTAGGGACTTCGATAATTTCCAG.............................................................................................TTCGTCAATTTCACGGACATAATGGCCAAAAATGTGCCTCAATCTCGAAAGGAGACGGAGTTTGCGCTTTCAGCATTGATGGAAATCCCTTCACAATACAAAGCGACGATGGAACTTAACTTACTGGG.......................................................................................................................TGGACAAAGTGGAAAATCTGTCAATAGGGTAGCTCTTCCTCCTCCTATGTATGGGGCAAGTTCTGTCGGTGGTTCAAAGACCTCACATGCACCAAGTTTTCAGCAGCCTGCAAGCTCGTATTATGGTTATGGAAGCCCTGCAGATGCAGAACCACATTTTCAGCCGACTTCAAGTTCTTACTACGACAGTGCTCGCCCAGTTGACAATGCTCCATCTGCTCCGAGTTCGCCCTACACTGCTCCCAGTTCTACCTATGACAATCAG.............................................................................................................................GTTTGCCCCATTTGTCTTACTAACCCAAAAGACATGGCCTTTGGCTGTGGGCATCAG............................................................................................ACATGTTGTGAGTGTGGGAGAGCGCTTGAGAATTGCCCAATATGTCGAAGTTCAATTCAAACCAGAATAAAGCTCTATTGAGCTGCTTGTTTTGCCCTGATTCCTTTTGCTATTCCAACCTGCAATGCTTTTTGATCAGTTTGGATGTGAAACCATGGTGATGAAGCTGATTTTTTTATTTGTTGGATATGGCTTTGGCCTTGTGCTAATGCAAATTTCCTTCTGTACATGGCTTGGTTCTTGTTTGTGTTTTGCTTTTGCCAAATTACTTTACTTCCAACTATAGAAGCATAAGATCCCTAGATTCAAATTGTCTGTAAATCAACTGTTTATTGTGCAGTGACCTTTAAAGAGTCTTGTGCTGATACTAGACCTAATACATTGCCATTTGTCAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0034H10-9CaQU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U577066" ref_strand="+" ref_description="SGN-U577066 Tomato 200607#2 [14 ESTs aligned] (*GB) gi|60459371|gb|AAX20031.1| (e_value=4e-47) RING-finger; (*ATH) AT5G14420.3 (e_value=2e-29) | Symbol: None | copine-related, low similarity to SP:Q99829 Copine I {Homo sapiens} | chr5:4648115-4650793 REVERSE | Aliases: None; (*SWP) sp|Q9LY87|RGLG2_ARATH (e_value=1e-28) E3 ubiquitin-protein ligase RGLG2 OS=Arabidopsis thaliana GN=RGLG2; ">
      <seq>gcgtcttgggtttgtattattttagtgttaacgtgtcttctctcttgtttcttactgttatcctgctgtcgtaattgcgtagcttgtaaaaggacaatgtagaagagccaaagtctatattgagtcggttttgaatgattacaagtctcaatttgatagccgcctttctcttcttaacctgcccctgccgcgtgaagtaatattcaagattcacaacctatccagaaacttcagttgtttgtaaatataaaaaaccattcttgataacagattcagattattggtgtatcatttgggtttttttttttgattgattttgacaggcctttttgattgattgtattgtggaacaaaacaaaaaagttgtctttttttctttttggcttaagggagttagtaattttgtagataagttgactttgatgggtggcaagagttcaagagaggatagttggaggcaagcttcatcgactcgatcttcctcttggaatcaatacgattatcctcaaactgcttatcctcaagatagttacagttactcacagcagacggctgttccttcttatgcaccaccaccaccatcccaacagaattatcccccacagcaccaacacaattattcttcacaaccccaacagaattatgcttctcatgaacatgaatctcggactcatactcatgctccacgaccaaggcttgatcggagatactcgaggattgcagacaattataattccctggatgaggtgactgaagcccttgcacgagctggtttggagtcttcgaatcttattgtgggtattgatttcaccaagagtaatgaatggacaggtaagaggtcttttagtaatcggagtctacatcacattgggcagaatttgaaaccatatgagcaagccatttccataattggaaaaacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0034H10-9CaQU/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0034H10.2" temp_strand="-" temp_description="C02SLe0034H10.2  AC215453.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0034H10 sequenced_by:kribb upload_account_name:korea">
        <position start="28339" stop="25870"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28040" g_stop="27295" g_length="746"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="746" r_length="746" r_score="0.999"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="27294" i_stop="26431" i_length="864">
            <donor d_prob="0.868" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="26430" g_stop="26346" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="747" r_stop="831" r_length="85" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="26345" i_stop="26259" i_length="87">
            <donor d_prob="0.933" d_score="1.00"/>
            <acceptor a_prob="0.628" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="26258" g_stop="26170" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="832" r_stop="920" r_length="89" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0034H10.2" gen_strand="-" ref_id="SGN-U577066" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>920</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0034H10.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U577066" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28040" e_stop="27295"/>
          <exon e_start="26430" e_stop="26346"/>
          <exon e_start="26258" e_stop="26170"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACGTCTTGGGTTTGTATTATTTTAGTGTTAACGTGTCTTCTCTCTTGTTTCTTACTGTTATCCTGCTGTCGTAATTGCGTAGCTTGTAAAAGGACAATGTAGAAGAGCCAAAGTCTATATTGAGTCGGTTTTGAATGATTACAAGTCTCAATTTGATAGCCGCCTTTCTCTTCTTAACCTGCCCCTGCCGCGTGAAGTAATATTCAAGATTCACAACCTATCCAGAAACTTCAGTTGTTTGTAAATATAAAAAACCATTCTTGATAACAGATTCAGATTATTGGTGTATCATTTGGGTTTTTTTTTTTGATTGATTTTGACAGGCCTTTTTGATTGATTGTATTGTGGAACAAAACAAAAAAGTTGTCTTTTTTTCTTTTTGGCTTAAGGGAGTTAGTAATTTTGTAGATAAGTTGACTTTGATGGGTGGCAAGAGTTCAAGAGAGGATAGTTGGAGGCAAGCTTCATCGACTCGATCTTCCTCTTGGAATCAATACGATTATCCTCAAACTGCTTATCCTCAAGATAGTTACAGTTACTCACAGCAGACGGCTGTTCCTTCTTATGCACCACCACCACCATCCCAACAGAATTATCCCCCACAGCACCAACACAATTATTCTTCACAACCCCAACAGAATTATGCTTCTCATGAACATGAATCTCGGACTCATACTCATGCTCCACGACCAAGGCTTGATCGGAGATACTCGAGGATTGCAGACAATTATAATTCCCTGGATGAGGTATGGATTAGAGATAAGTATGAAGCAATTTGGATGTTTTCAGCAATTCTCTATTATTTTTCTGCCAGCCTTTTAGACTTTACTATTAGCATTGTGATTCACTCCATCATAATTCTGAATTTAGTACTTCTAGCGCATGTTGTTTTCATTTCTTCAGTTATCATATTATGTTTTCCTTAGCTACTGCTTTCATTACCATATAAAACTGCTTTGAGATGTGCTACTTGAGTCGAAGGTCTCAAGGAAATAGCTCGTTGTAGAGTAACGTTTGCTTACACTCTACCTATCTAGACCCACTTGTGGGATTATACGGAATATATTATTGTTGTAGTACTACTTCTAATGCCTACATATTATGCTGTATGCAGTTGCATTCACCCATTAATGTTATTAAGGTATGTCTGACAACTGAATTAGGAAAAGCTATTTAGGAGTAGGGTTATAAATATGGGATGCATGAAGTTTTTATCATCTTAATTTTCTACGTGTGTGCAAGCACTAAAACATCATAGACACTATTTTCAACGATGCTGGAAATAAGACTGCATATGGAAATAGAAGGGGGGAAGGGGGTGAATGATGATAGACCAGATAACTGCCGGAAGATGCTACCTTTGAAAAGCTTTACTTTTTTTAATCTCTCCTACTTCCATAGAGGTGTAATTTTGATTATTGTTAATCTTAATATCAGATGCTTTACTTAACAGATCAAGAGAAGTGGACACTATAAGAACCATAGAATTTTTAAATTTTAACGACCCCCTTTTAAGGACATTGGCTCATGATTTTTCACCTTTTATATATGATAATTTTTTATGATGAAAACACTATGTATGACAAAAATGCAATTTTATTTTTAATCAGGTGACTGAAGCCCTTGCACGAGCTGGTTTGGAGTCTTCGAATCTTATTGTGGGTATTGATTTCACCAAGAGTAATGAATGGACAGGTTAAGTTTTTTTCTTCTGTTTCGTGCCTCTCTGGTCAGTTGCATGCTATGTTTTTCAATAGTCTAAAGTGGGCATATGCTTTTTAGGTAAGAGGTCTTTTAGTAATCGGAGTCTACATCACATTGGGCAGAATTTGAACCCATATGAGCAAGCCATTTCCATAATTGGAAAAACC</genome_strand>
        <mrna_strand>GCGTCTTGGGTTTGTATTATTTTAGTGTTAACGTGTCTTCTCTCTTGTTTCTTACTGTTATCCTGCTGTCGTAATTGCGTAGCTTGTAAAAGGACAATGTAGAAGAGCCAAAGTCTATATTGAGTCGGTTTTGAATGATTACAAGTCTCAATTTGATAGCCGCCTTTCTCTTCTTAACCTGCCCCTGCCGCGTGAAGTAATATTCAAGATTCACAACCTATCCAGAAACTTCAGTTGTTTGTAAATATAAAAAACCATTCTTGATAACAGATTCAGATTATTGGTGTATCATTTGGGTTTTTTTTTTTGATTGATTTTGACAGGCCTTTTTGATTGATTGTATTGTGGAACAAAACAAAAAAGTTGTCTTTTTTTCTTTTTGGCTTAAGGGAGTTAGTAATTTTGTAGATAAGTTGACTTTGATGGGTGGCAAGAGTTCAAGAGAGGATAGTTGGAGGCAAGCTTCATCGACTCGATCTTCCTCTTGGAATCAATACGATTATCCTCAAACTGCTTATCCTCAAGATAGTTACAGTTACTCACAGCAGACGGCTGTTCCTTCTTATGCACCACCACCACCATCCCAACAGAATTATCCCCCACAGCACCAACACAATTATTCTTCACAACCCCAACAGAATTATGCTTCTCATGAACATGAATCTCGGACTCATACTCATGCTCCACGACCAAGGCTTGATCGGAGATACTCGAGGATTGCAGACAATTATAATTCCCTGGATGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGACTGAAGCCCTTGCACGAGCTGGTTTGGAGTCTTCGAATCTTATTGTGGGTATTGATTTCACCAAGAGTAATGAATGGACAG.......................................................................................GTAAGAGGTCTTTTAGTAATCGGAGTCTACATCACATTGGGCAGAATTTGAAACCATATGAGCAAGCCATTTCCATAATTGGAAAAACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0034H10-9CaQU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U589497" ref_strand="+" ref_description="SGN-U589497 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>aacctatccagaaacttcagttgtttgtaaatataaaaaaccattcttgataacagattcagattattggtgtatcatttgggtttttttttttgattgattttgacaggcctttttgattgattgtattgtggaacaaaacaaaaaagttgtctttttttctttttggcttaagggagttagtaattttgtagataagttgactttgatgggtggcaagagttcaagagaggatagttggaggcaagcttcatccactccatcttcctcttggaatccataccaatatcctccaactgcttatcctccagataagtaccggtaatcaccgcaaacggctggtccttcctattcaccaccaccaccattcccacagaaatattccccaccacacccacaccattattcttcaccacccccacagaaatatggttctcctggacctgaatctccgactcctactcctgcttcaccaacaaaggtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0034H10-9CaQU/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0034H10.2" temp_strand="-" temp_description="C02SLe0034H10.2  AC215453.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0034H10 sequenced_by:kribb upload_account_name:korea">
        <position start="28126" stop="27044"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="27826" g_stop="27343" g_length="484"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="484" r_length="484" r_score="0.917"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0034H10.2" gen_strand="-" ref_id="SGN-U589497" ref_strand="+">
        <total_alignment_score>0.917</total_alignment_score>
        <cumulative_length_of_scored_exons>484</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0034H10.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U589497" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="27826" e_stop="27343"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACCTATCCAGAAACTTCAGTTGTTTGTAAATATAAAAAACCATTCTTGATAACAGATTCAGATTATTGGTGTATCATTTGGGTTTTTTTTTTTGATTGATTTTGACAGGCCTTTTTGATTGATTGTATTGTGGAACAAAACAAAAAAGTTGTCTTTTTTTCTTTTTGGCTTAAGGGAGTTAGTAATTTTGTAGATAAGTTGACTTTGATGGGTGGCAAGAGTTCAAGAGAGGATAGTTGGAGGCAAGCTTCATCGACTCGATCTTCCTCTTGGAATCAATACGATTATCCTCAAACTGCTTATCCTCAAGATAGTTACAGTTACTCACAGCAGACGGCTGTTCCTTCTTATGCACCACCACCACCATCCCAACAGAATTATCCCCCACAGCACCAACACAATTATTCTTCACAACCCCAACAGAATTATGCTTCTCATGAACATGAATCTCGGACTCATACTCATGCTCCACGACCAAGGCTT</genome_strand>
        <mrna_strand>AACCTATCCAGAAACTTCAGTTGTTTGTAAATATAAAAAACCATTCTTGATAACAGATTCAGATTATTGGTGTATCATTTGGGTTTTTTTTTTTGATTGATTTTGACAGGCCTTTTTGATTGATTGTATTGTGGAACAAAACAAAAAAGTTGTCTTTTTTTCTTTTTGGCTTAAGGGAGTTAGTAATTTTGTAGATAAGTTGACTTTGATGGGTGGCAAGAGTTCAAGAGAGGATAGTTGGAGGCAAGCTTCATCCACTCCATCTTCCTCTTGGAATCCATACCAATATCCTCCAACTGCTTATCCTCCAGATAAGTACCGGTAATCACCGCAAACGGCTGGTCCTTCCTATTCACCACCACCACCATTCCCACAGAAATATTCCCCACCACACCCACACCATTATTCTTCACCACCCCCACAGAAATATGGTTCTCCTGGACCTGAATCTCCGACTCCTACTCCTGCTTCACCAACAAAGGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0034H10-9CaQU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U564941" ref_strand="+" ref_description="SGN-U564941 Tomato 200607#2 [5 ESTs aligned] (*GB) gi|157345377|emb|CAO14675.1| (e_value=3e-50) unnamed; (*ATH) AT5G40570.1 (e_value=1e-39) | Symbol: None | surfeit locus protein 2 family protein / SURF2 family protein, contains Pfam profile PF05477: Surfeit locus protein 2 (SURF2) | chr5:16264026-16265479 FORWARD | Aliases: MNF13.9, MNF13_9; ">
      <seq>gcgaagaaagctatggggaagaaagcaagtggagtaggagaaggaggagatggatccactggaaaagaaggttacaagcttctgggcaatccgactttcaaaaaattggagaatggccgcttcaaatgcgttcaaacagggcatgagctgccggaacacgctagggactcttatgcccacagcaagcactgacgcttgggtctaattgatgctgcactttctaagaataaacctcctctcaatatgtttaaccaagatcctctcaatcggtcaaagttgatatgtaaattaacaggagatacagttaataagtcagaggagcatatatggaaacacatgagtggaaagcgctttctcagaatgttagagaaaaaggaaactgaaactgaaatggaaaatggagggctagaaaagcaagtagaaaatgaagcggctaagaagacggacagcaaagccaatcgtagggacaaaaagaaaaacaaaaagaaagaaatagaagatgctagcaaggttatatctgaaataagggattcttctggaaagaacagtggctctgaagatgatgatgagttttggatgcctccagttggtgctcgctgggacaatgatgatggaggtgatcgatggggatctggttcggaatcagaagaagaagaagaagatgctattgggcaagatggaggaactgaagaggaaaaccatgacaccggagagctttccaagcgggcaaaacgcatgtccattgagattggacccagtagctttgcctcaaggaagaaaaagaagaagaccaatgctacatgatatttttcctccgaaaaagcattacaaattttgttatcatcttgggtttagttgtgcttgcttcattttagcttttctttattttccttattattgtgttactgaaaggaagaaatttcttacatttagagcgtcaacacatttattgattaattttcggactaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0034H10-9CaQU/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0034H10.2" temp_strand="-" temp_description="C02SLe0034H10.2  AC215453.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0034H10 sequenced_by:kribb upload_account_name:korea">
        <position start="36044" stop="32617"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="35744" g_stop="35476" g_length="269"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="269" r_length="269" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="35475" i_stop="34839" i_length="637">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="34838" g_stop="34741" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="270" r_stop="367" r_length="98" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="34740" i_stop="34631" i_length="110">
            <donor d_prob="0.951" d_score="1.00"/>
            <acceptor a_prob="0.964" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34630" g_stop="34322" g_length="309"/>
          <reference_exon_boundary r_type="cDNA" r_start="368" r_stop="676" r_length="309" r_score="0.997"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="34321" i_stop="33363" i_length="959">
            <donor d_prob="0.925" d_score="1.00"/>
            <acceptor a_prob="0.959" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="33362" g_stop="33314" g_length="49"/>
          <reference_exon_boundary r_type="cDNA" r_start="677" r_stop="725" r_length="49" r_score="0.980"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="33313" i_stop="33164" i_length="150">
            <donor d_prob="0.875" d_score="0.98"/>
            <acceptor a_prob="0.998" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="33163" g_stop="32908" g_length="256"/>
          <reference_exon_boundary r_type="cDNA" r_start="726" r_stop="977" r_length="252" r_score="0.918"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0034H10.2" gen_strand="-" ref_id="SGN-U564941" ref_strand="+">
        <total_alignment_score>0.975</total_alignment_score>
        <cumulative_length_of_scored_exons>981</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0034H10.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U564941" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="35744" e_stop="35476"/>
          <exon e_start="34838" e_stop="34741"/>
          <exon e_start="34630" e_stop="34322"/>
          <exon e_start="33362" e_stop="33314"/>
          <exon e_start="33163" e_stop="32908"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCGAAGAAAGCTATGGGGAAGAAAGCAAGTGGAGTAGGAGAAGGAGGAGATGGATCCACTGGAAAAGAAGGTTACAAGCTTCTGGGCAATCCGACTTTCAAAAAATTGGAGAATGGCCGCTTCAAATGCGTTCAAACAGGGCATGAGCTGCCGGAACACGCTAGGGACTCTTATGCCCACAGCAAGCACTGCCGCTTGGGTCTAATTGATGCTGCACTTTCTAAGAATAAACCTCCTCTCAATATGTTTAACCAAGATCCTCTCAATCGGTAATAGTCCTTATTTCTACTACTAGGGTTTTATATGCAAACGCTAATCACTGCTAGAGTCAATGCATCCTCTGGTTCCAAAAAAAAAATGCCTAGTACTGTAGTAGGTATTATATCCTCCGAATTTGGCCTATGAATTTCTCTACAAAGAGGGAAAAATAGTTAAATTGGAACTATTGAATACGATTGCACTAGAAATAGTCATAGTTATTTCAACCTTTGTCATTATAACAATACATTGCACTCTCAAGCAATCAAGGGAGAAGAGTTTACAAATATAAAATAAGACAACTGGAGTTTAGTGCACCAGGCTGCCCTTTTATTTCCTTTTGCCTGAAAAATCCACCCGGATATATCATGAGGTTCATCATTCTAATAATCATAATGGGATATACATTGGAATTCAATTTAAAGCATATATACAGCGTATGACCTTAGTATGACATGTTTGTTTGAATTGTAACTTGTAGCAATCTAGTGGAATACTTTTGATGTACAACAGAGAAATTGATCATTTGTTGCACGCTAGGCGCAAAATTTCTTGGAAATTATGGAGGAAAATCTGATATATGTGTATTTTCCTATTGTTCTTATGCTAATTTAATCTCTGGCGTAATTTGTTATGCAATTCGTGCAGGTCAAAGTTGATATGTAAATTAACAGGAGATACAGTTAATAAGTCAGAGGAGCATATATGGAAACACATGAGTGGAAAGCGCTTTCTCAGAATGTTAGGTTTGTTATGAGTCCCCAGTTACTTGTTTATTGAGATGTTTGTGTATGTATATTATGTTCTTGCGCATTCTACTGAGTACCACTTATGATACATGCACTACTTTGAACAGAGAAAAAGGAAACTGAAACTGAAATGGAAAATGGAGGGCTAGAAAAGCAAGTAGAAAATGAAGCGGCTAAGAAGACGGACAGCAAAGCCAATCGTCGGGACAAAAAGAAAAACAAAAAGAAAGAAATAGAAGATGCTAGCAAGGTTATATCTGAAATAAGGGATTCTTCTGGAAAGAACAGTGGCTCTGAAGATGATGATGAGTTTTGGATGCCTCCAGTTGGTGCTCGCTGGGACAATGATGATGGAGGTGATCGATGGGGATCTGGTTCGGAATCAGAAGAAGAAGAAGAAGATGCTATTGGGCAAGGTATCCGTTATTACTTATTAGTAATCGTAAACTTTAAGGGTGGAAATTGCCAAAAATCCCACGTATATCTTTGTATGTTAGGTCACAACAACAACATACTCAGTGGCGAATTTAGAGGCAAAAAATGCTCGTGGTCTCTTCATAAATTAGATATTTTATGTATAAATTTCTCAAATTTGTATAATATTATATTATGGCACCTGTACTAGAAAAAGTCTAGTGGGTCCACATGGTTAAGTGTTGAGCTTTTGACCTTGAGGACTGAAGATCAATTCCCCCACTTAATAAATTTTTCTTGGTGCACCCATATTCGAAAAAATCTTAGATTCGCCTCTGTTACATGCCTAGATAATACCACAAGTGGGGTCTGGAGAGGTTGGTGTGTACACAGTCTTATCCCTACCTTAGGCTGTATGTAAGATTGATACATTAATGCCTACACTGCATGCAAATTTGGCGATGGTAGGGCAGAAGCTTAACACTGTTCTTGTACAATCAAACCTGTGAATTGAATGTGTAATCTGTCTCTGCTTTTTTTCTGTGCTAAATATATTGTTTCATACTTCACGGCTAGTGAATTGCAATGCATGCTCCTTGAATATTATAAACATAAATCTGATGGAGCTCAACATTAGCTCTTTTATCTACTTTCAGAGGTGTTCGATAAATATTTGCCTTCCAATGTGAGAAAAGTCATTCCTTTTTCTCCTTCTCATATATATGTTTCATGAAGAAGTCATCGTGTTTTCTTCTCTAAAGCGAATTGTTAGAACAAAATATATAAAGGCCATACTGCATATGATATAGAGCTCTTTGAATTCAGTAAGCATATATATGGTATTGAGGTTTCACTTAACAGCTAACGGCTTGGGTGTGTGTTTGTCAATTATCAGTATAAGTGCCTATTGAATTTGATTTGGTGAATGCATGAAAAATCTTACTACATTTTATGCGATCAGATGGAGGAACTGAAGAGGAAAATCATGACACCGGAGAGCTTTCCAAGCGGTATGGTTACTCTGTCAATGTTTTGATGTCTCCTGCCACACGTTTTGTGTTGACCACCATACCCTTCCCCTCTATATTTAAAAATTATATGCAGAAACTGGGTGAACATTTAAATTTAACATGTGAAGTCAAATTTTTGTTTTGTGGCAGGGCAAAACGCATGTCCCTTGAGATTGGACCCAGTAGCTTTGCCTCAAGGAAGAAAAAGAAGAAGACCAGTGCTACATGATATTTTTCCTCTGAAAAAGCATTACAAATTTTGTTATCATCTTGGGTTTAGTTGTATACTGCTTGCTTCATTTTAGCTTTTCTTTATTTTCCTTACTATTGTGTTACTG-TAGGAAGAAATTTCTTACAGTTAGAGCGTCAACACATGTATTGATTAATTTTCGGACTATTATGTTGA</genome_strand>
        <mrna_strand>GCGAAGAAAGCTATGGGGAAGAAAGCAAGTGGAGTAGGAGAAGGAGGAGATGGATCCACTGGAAAAGAAGGTTACAAGCTTCTGGGCAATCCGACTTTCAAAAAATTGGAGAATGGCCGCTTCAAATGCGTTCAAACAGGGCATGAGCTGCCGGAACACGCTAGGGACTCTTATGCCCACAGCAAGCACTGACGCTTGGGTCTAATTGATGCTGCACTTTCTAAGAATAAACCTCCTCTCAATATGTTTAACCAAGATCCTCTCAATCG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAAGTTGATATGTAAATTAACAGGAGATACAGTTAATAAGTCAGAGGAGCATATATGGAAACACATGAGTGGAAAGCGCTTTCTCAGAATGTTAG..............................................................................................................AGAAAAAGGAAACTGAAACTGAAATGGAAAATGGAGGGCTAGAAAAGCAAGTAGAAAATGAAGCGGCTAAGAAGACGGACAGCAAAGCCAATCGTAGGGACAAAAAGAAAAACAAAAAGAAAGAAATAGAAGATGCTAGCAAGGTTATATCTGAAATAAGGGATTCTTCTGGAAAGAACAGTGGCTCTGAAGATGATGATGAGTTTTGGATGCCTCCAGTTGGTGCTCGCTGGGACAATGATGATGGAGGTGATCGATGGGGATCTGGTTCGGAATCAGAAGAAGAAGAAGAAGATGCTATTGGGCAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGAGGAACTGAAGAGGAAAACCATGACACCGGAGAGCTTTCCAAGCG......................................................................................................................................................GGCAAAACGCATGTCCATTGAGATTGGACCCAGTAGCTTTGCCTCAAGGAAGAAAAAGAAGAAGACCAATGCTACATGATATTTTTCCTCCGAAAAAGCATTACAAATTTTGTTATCATCTTGGGTTTAGTTG-----TGCTTGCTTCATTTTAGCTTTTCTTTATTTTCCTTATTATTGTGTTACTGAAAGGAAGAAATTTCTTACATTTAGAGCGTCAACACATTTATTGATTAATTTTCGGACTAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0034H10-9CaQU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U590635" ref_strand="-" ref_description="SGN-U590635 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|168274274|dbj|BAG09557.1| (e_value=3e-47) acetylcholinesterase; (*ATH) AT5G14450.1 (e_value=1e-42)  Symbol: None | GDSL-motif lipase/hydrolase family protein, similar to early nodulin ENOD8 (Medicago sativa) GI:304037, elicitor-induced glycoprotein iEP4 (Daucus carota) GI:1911765, pollen-expressed coil protein (Medicago sativa) GI:1110502; contain... ; (*SWP) sp|Q7Y1X1|EST_HEVBR (e_value=1e-21) Esterase OS=Hevea brasiliensis; ">
      <seq>gcgggtccaacgttattatacattgatagcaagacaaaacgacataatgaattggccttagagttcaatagacagctgaaagccaggataagaacattgagagcagagcttaagcatgctgctataacatatgtagatgtttatgctgccaagtatgaactgatcagcaatgccaagagccaagatttcatggaaccccagaaaatatgctgtgggttacacgaggggaacagacatgtatggtgtggtcagaaaggaatagtgagaggtgcagaagtttttggaggagcttgtgtcaacccttcagattatataagctgggatggaatacattactcacaagctgctaatcaatggattgcaaatcacatactaaatggcaatttctctgatcctcccattcccatcactcatgcttgtcataaacatcttcactattaggaatcttgtattataaacatgcatcttaactaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0034H10-9CaQU/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0034H10.2" temp_strand="+" temp_description="C02SLe0034H10.2  AC215453.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0034H10 sequenced_by:kribb upload_account_name:korea">
        <position start="38566" stop="39724"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="38872" g_stop="39014" g_length="143"/>
          <reference_exon_boundary r_type="cDNA" r_start="42" r_stop="184" r_length="143" r_score="0.986"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="39015" i_stop="39133" i_length="119">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="39134" g_stop="39424" g_length="291"/>
          <reference_exon_boundary r_type="cDNA" r_start="185" r_stop="475" r_length="291" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0034H10.2" gen_strand="+" ref_id="SGN-U590635" ref_strand="-">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>434</cumulative_length_of_scored_exons>
        <coverage percentage="0.914" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0034H10.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U590635" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="38872" e_stop="39014"/>
          <exon e_start="39134" e_stop="39424"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACATAATGAATTGGCCTTAGAGTTCAATAGACAGCTGAAAGCCAGGATAAGAACATTGAGAGCAGAGCTTGAGCATGCTGCTATAACATATGTAGATGTCTATGCTGCCAAGTATGAACTGATCAGCAATGCCAAGAGCCAAGGTATATGTTAATACACAAACACATACCAATAATTTTACCATACACTTGTTGTTTCGTACCAAGGCTTAAACAGATGAAAATAAATCATCTAACTCTACGGGCTTTAAAATTTTGAACAGATTTCATGGAACCCCAGAAAATATGCTGTGGGTTACACGAGGGGAACAGACATGTATGGTGTGGTCAGAAAGGAATAGTGAGAGGTGCAGAAGTTTTTGGAGGAGCTTGTGTCAACCCTTCAGATTATATAAGCTGGGATGGAATACATTACTCACAAGCTGCTAATCAATGGATTGCAAATCACATACTAAATGGCAATTTCTCTGATCCTCCCATTCCCATCACTCATGCTTGTCATAAACATCTTCACTATTAGGAATCTTGTATTATAAACATGCATCTTAACTAGC</genome_strand>
        <mrna_strand>ACATAATGAATTGGCCTTAGAGTTCAATAGACAGCTGAAAGCCAGGATAAGAACATTGAGAGCAGAGCTTAAGCATGCTGCTATAACATATGTAGATGTTTATGCTGCCAAGTATGAACTGATCAGCAATGCCAAGAGCCAAG.......................................................................................................................ATTTCATGGAACCCCAGAAAATATGCTGTGGGTTACACGAGGGGAACAGACATGTATGGTGTGGTCAGAAAGGAATAGTGAGAGGTGCAGAAGTTTTTGGAGGAGCTTGTGTCAACCCTTCAGATTATATAAGCTGGGATGGAATACATTACTCACAAGCTGCTAATCAATGGATTGCAAATCACATACTAAATGGCAATTTCTCTGATCCTCCCATTCCCATCACTCATGCTTGTCATAAACATCTTCACTATTAGGAATCTTGTATTATAAACATGCATCTTAACTAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0034H10-9CaQU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U586538" ref_strand="+" ref_description="SGN-U586538 Tomato 200607#2 [8 ESTs aligned] (*GB) gi|147777887|emb|CAN77974.1| (e_value=2e-37) hypothetical; ">
      <seq>cagagtttatgatacgccgaaagcgtaatagaccaattgattccaaatataaaattccttaaagaaggaaggagcaaatgatcaatatggtcatgataatgaggcaagtgctataaaggagcacattgacataacacttcataaaatcttgaaaaaggttcaggtacctgaaataatgaaaaaaattgaagagatctcgataagttatgtcttgttggaatcgatatcaaataaccgtcgacggtatctttgatataaggtagcgctcaatgaaataaaattgtgatgaggatcttgaattcaaatctgtcatatagtgtggacagattaatggttgaccaagtaaaatgcacaattcaagtatattttgtttcacttagaaaagtgacattttggactggtagtccataaatcaaggtataatgtcagtggggtacaaataaattattatgcaataatataaccgtaagatatcaaatacggtttgtgtcttggggcataaaggtttatcgcaaaaatcctgacattattggagatgttttctcctttggtggatgcaatgaggtttgttttgatctggcaacatatgaaaagcttgaatgcatgtaatgaataattgtaatgtctagctagacaatgaaggttatatgaaaatccttgaaacaatcgaggtgtctgaagcatacaagagtttgaaagaaactttttcaataaagcttcaagaatccttatatggattgaaatagtcaaggaagaaaagggtacaaaagaatgatcctaattgtccttgtatttttatgaaaaggtcttggtaagacaaaattttgtcttgacctacagattgttaatttgacaaataaaatatttgtctaacagtgcacatacactgaaaaattttgatgcaattttatgtggatatatcgcattcattgagtaccccaatgattatgagatcacttgtcataaatgatgattcagtttgatctcaaaagaaggatgatgagtttcttggtgatgaaactctatcttggtgcaatcagggcactagtgcatcttactaacaatactagaccagatatctgttttgcagtaagtctactggcaagattcagttcctccccaacaaaaagacattggaatggcgttaaacacatacttcgatatcttcgagggaccatggacatgggtttattctattccaatgaatccaaatcagaactgattggttacgcagatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0034H10-9CaQU/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0034H10.2" temp_strand="-" temp_description="C02SLe0034H10.2  AC215453.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0034H10 sequenced_by:kribb upload_account_name:korea">
        <position start="47071" stop="45239"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="46771" g_stop="45539" g_length="1233"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="1237" r_length="1237" r_score="0.942"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0034H10.2" gen_strand="-" ref_id="SGN-U586538" ref_strand="+">
        <total_alignment_score>0.942</total_alignment_score>
        <cumulative_length_of_scored_exons>1233</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0034H10.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U586538" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="46771" e_stop="45539"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGAGTCTATGATACGCCGAAAGCGTAATAGACCAATTGATTCCAAATATAAAATTCCTTAAAGAAGGAAGGAGCAAATGATCAATATGGTCATGATAATGAGGCAAGTGCTATAAAAGAGCACATTGACATAACACTTCATAAAATCTTGAAAAAGGTTCAGGTACCTGAAATAATG--AAAAA-TGAAGAGATCTCGATAAGTTATGTCTTGTTGGAATCGATATCAAATAACCGTCGACAGTATCTTTGATATGAGGTAGCGCTCAATGATAT-AAATTGTGATGAGGATCTTGAATTCAAATCTGTCATATAGTGTGAACAGATAAATGGTTGGCCAAGTAAAATGCACAATTCAAGTATATTTTGTTTCACTTAGAAAAGTGATATTTTGGACTTGTAGTCCATAAATCAAGGTATAATGTCAGTGGGGTACAAATAAATTATTATGCGATAGTATAACCATAAGATATCAAATATGGTTTGTGCCTTGGGGCATAAAGGTTTATCGCAAAAATCCTGACATTATTGGAGATGTTTTCTCCTTTGATGGATGCAATGAGGTTTGTTTTGATCTGACAACATATGAAAA-CTTGAATGCATGTAAATGAATAATTGTAATGTCTAGCTAGACAATGAAGGTTATATGAAAATTCTTGAAACAATCGAGGTGTCTGAAGCATATAAGAGTTTGAAAGAAACTTTTCCAATAAAGCTTCAAGAATCCTTATATGGATTGAAATAGTCAAGGAAGAAAAAGGGTACAAGAGAATGACCCTAATTTTCCTTGTATTTTTATGAAAAGGTCTTGGTAAGACAAAATTTTGTCTAGACCTACAGATTGTTAATTTGACAAATAAAATATTTGTCTAGCAGTGCACATACACTGAAAAATTTTGATGCAATTTTATGTGGATATATCGCATTCATTGAGTACCCCAATGATTATGAGATCACTTGACATAAATGATGATTCAGTTTGATCTCAAAAGAAGGATGAAGAGTTTCTTAGTGATGAAACTCTATCTTGGTGCAATCAGGGCACTAGTGCATCTTACTAACAATATTTGACCAGATATTTGTTTTGCAGTAAATTTACTGGCAAGATTCAGTTTCTCCCCGA-TAAAGGACATTGAAATGGTGTTGAACACATGATTGAATATCCTCATAGGACCATAGTTATGGGCTTATTCTATTCCGAGGAATCCAAAACAAAATTGATTGGTTACGCAGATG</genome_strand>
        <mrna_strand>CAGAGTTTATGATACGCCGAAAGCGTAATAGACCAATTGATTCCAAATATAAAATTCCTTAAAGAAGGAAGGAGCAAATGATCAATATGGTCATGATAATGAGGCAAGTGCTATAAAGGAGCACATTGACATAACACTTCATAAAATCTTGAAAAAGGTTCAGGTACCTGAAATAATGAAAAAAATTGAAGAGATCTCGATAAGTTATGTCTTGTTGGAATCGATATCAAATAACCGTCGACGGTATCTTTGATATAAGGTAGCGCTCAATGAAATAAAATTGTGATGAGGATCTTGAATTCAAATCTGTCATATAGTGTGGACAGATTAATGGTTGACCAAGTAAAATGCACAATTCAAGTATATTTTGTTTCACTTAGAAAAGTGACATTTTGGACTGGTAGTCCATAAATCAAGGTATAATGTCAGTGGGGTACAAATAAATTATTATGCAATAATATAACCGTAAGATATCAAATACGGTTTGTGTCTTGGGGCATAAAGGTTTATCGCAAAAATCCTGACATTATTGGAGATGTTTTCTCCTTTGGTGGATGCAATGAGGTTTGTTTTGATCTGGCAACATATGAAAAGCTTGAATGCATGT-AATGAATAATTGTAATGTCTAGCTAGACAATGAAGGTTATATGAAAATCCTTGAAACAATCGAGGTGTCTGAAGCATACAAGAGTTTGAAAGAAACTTTTTCAATAAAGCTTCAAGAATCCTTATATGGATTGAAATAGTCAAGGAAG-AAAAGGGTACAAAAGAATGATCCTAATTGTCCTTGTATTTTTATGAAAAGGTCTTGGTAAGACAAAATTTTGTCTTGACCTACAGATTGTTAATTTGACAAATAAAATATTTGTCTAACAGTGCACATACACTGAAAAATTTTGATGCAATTTTATGTGGATATATCGCATTCATTGAGTACCCCAATGATTATGAGATCACTTGTCATAAATGATGATTCAGTTTGATCTCAAAAGAAGGATGATGAGTTTCTTGGTGATGAAACTCTATCTTGGTGCAATCAGGGCACTAGTGCATCTTACTAACAATACTAGACCAGATATCTGTTTTGCAGTAAGTCTACTGGCAAGATTCAGTTCCTCCCCAACAAAAAGACATTGGAATGGCGTTAAACACATACTTCGATATCTTCGAGGGACCATGGACATGGGTTTATTCTATTCCAATGAATCCAAATCAGAACTGATTGGTTACGCAGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0034H10-9CaQU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U567070" ref_strand="+" ref_description="SGN-U567070 Tomato 200607#2 [3 ESTs aligned] ">
      <seq>ttcttttagaattttagtaagttcttttataacacgttatcagcacgagtctctagctaattgagagtgagttttagttttttctttaactcatgttttggttgatctcgatatgagaatcaaggtattatttgcataagatcaggtatgtattttctaaaatattttatgatttagaataaaatagtattcagtcactagcaattatcaggaaccgaagacatatactactattggttgaatatgacatgctatataaaacttattaaatggaagaaggtataaaattttaatagcatgagtttgaatgttattttgattgttttgaaagactcaaagggtgagtcgtgttgtacttcggtctattataccgttggtcaagggtaagacgattgattcaagtttcatcgcaccaaaagggtaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0034H10-9CaQU/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0034H10.2" temp_strand="-" temp_description="C02SLe0034H10.2  AC215453.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0034H10 sequenced_by:kribb upload_account_name:korea">
        <position start="48112" stop="47113"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="47812" g_stop="47413" g_length="400"/>
          <reference_exon_boundary r_type="cDNA" r_start="25" r_stop="425" r_length="401" r_score="0.923"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0034H10.2" gen_strand="-" ref_id="SGN-U567070" ref_strand="+">
        <total_alignment_score>0.923</total_alignment_score>
        <cumulative_length_of_scored_exons>400</cumulative_length_of_scored_exons>
        <coverage percentage="0.941" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0034H10.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U567070" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="47812" e_stop="47413"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTATAACACGTTATCAGCACGAGTCTCTAGCCAATTAAGATTGAGTTTTA-CTTTTTCTTTAACTCATGTTTTGGTTGATTTCGTTATGAAGATCAAAGTATTGTATGCATAAAATCAGGTATGTATTTTCTAAAATATTTTATGATTTAGAATAAAATAGTGTTCAGTCACTAACAATTATCAGGAACCGAAGACATATACTACTATTGGTTGAATATGACATGCTATACAAAATTTCTTAAATAGAAAAAGGTGTAAGATTTTAATAGCATGAATTTGAATGTTATTTTGATTGTTTTGAAAGACTCAAAGGATAAATCATGTTGTACTTCGGTTTATTATACCGTTGGTTAAGGGTAAGACGATGGATTCAAGTTTCATCGCACCAAAAGGGTAAG</genome_strand>
        <mrna_strand>TTTTATAACACGTTATCAGCACGAGTCTCTAGCTAATTGAGAGTGAGTTTTAGTTTTTTCTTTAACTCATGTTTTGGTTGATCTCGATATGAGAATCAAGGTATTATTTGCATAAGATCAGGTATGTATTTTCTAAAATATTTTATGATTTAGAATAAAATAGTATTCAGTCACTAGCAATTATCAGGAACCGAAGACATATACTACTATTGGTTGAATATGACATGCTATATAAAACTTATTAAATGGAAGAAGGTATAAAATTTTAATAGCATGAGTTTGAATGTTATTTTGATTGTTTTGAAAGACTCAAAGGGTGAGTCGTGTTGTACTTCGGTCTATTATACCGTTGGTCAAGGGTAAGACGATTGATTCAAGTTTCATCGCACCAAAAGGGTAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0034H10-9CaQU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U603695" ref_strand="+" ref_description="SGN-U603695 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|157345382|emb|CAO14680.1| (e_value=1e-23) unnamed; (*ATH) AT3G27470.1 (e_value=5e-17) | Symbol: None | expressed protein, contains Pfam profile PF05212: Protein of unknown function (DUF707) | chr3:10164286-10168111 FORWARD | Aliases: K1G2.18; ">
      <seq>gccccttcagggttgactataatgcaatacttttgtggatcactgaagtcaactgtttgcggcttctcctttttgtgattctgaaatctccgaggagaatgggttcacctacgcgcagcagctctaacactagaagaggaaatgaaatgatgaggcttcttgtgacaaccattgtcggagttgtgattggtattttcttaggcgtgtcgtttcctactctttcattgaccaagctgaacttaccttctaatctttttgggttaattaatctcacttacattgaggagaagtattcaggcctctcaacgcaagatctattaaatgtcttgtcttcccttaagagatacagaggccattcacacggccacaagcattccgacacaaagatttgggttccatcaaaccctcgaggtgctgagaggctaccag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0034H10-9CaQU/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0034H10.2" temp_strand="+" temp_description="C02SLe0034H10.2  AC215453.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0034H10 sequenced_by:kribb upload_account_name:korea">
        <position start="49856" stop="51426"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="49986" g_stop="49995" g_length="10"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="10" r_length="10" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="49996" i_stop="50160" i_length="165">
            <donor d_prob="0.999" d_score="0.00"/>
            <acceptor a_prob="0.684" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="50161" g_stop="50268" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="11" r_stop="118" r_length="108" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="50269" i_stop="50366" i_length="98">
            <donor d_prob="0.831" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="50367" g_stop="50481" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="119" r_stop="233" r_length="115" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="50482" i_stop="50733" i_length="252">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.908" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="50734" g_stop="50886" g_length="153"/>
          <reference_exon_boundary r_type="cDNA" r_start="234" r_stop="386" r_length="153" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="50887" i_stop="51083" i_length="197">
            <donor d_prob="0.927" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="51084" g_stop="51126" g_length="43"/>
          <reference_exon_boundary r_type="cDNA" r_start="387" r_stop="429" r_length="43" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0034H10.2" gen_strand="+" ref_id="SGN-U603695" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>429</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0034H10.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U603695" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="49986" e_stop="49995"/>
          <exon e_start="50161" e_stop="50268"/>
          <exon e_start="50367" e_stop="50481"/>
          <exon e_start="50734" e_stop="50886"/>
          <exon e_start="51084" e_stop="51126"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCCCCTTCAGGTATATTTATGGAACATTTACAAATTTCTGCATATTTTTTTAAGGCATTTTTCCGACATATAATTGGAGTAATGTGAAATTTGAATTGATTTGTGTGGTGTAAGTAATCTAATTTTTGGGATAAGGGAACGGAAAAATTGATTCGTAATCGTTTTGATGTTTTAGGGTTGACTATAATGCAATACTTTTGTGGATCACTGAAGTCAACTGTTTGCGGCTTCTCCTTTTTGTGATTCTGAAATCTCCGAGGAGAATGGGTTCACCTACGCGCAGGTTTTTAGTTTTAAAGTGATTTATGGGTCCTTTATTGCCTTTTATTGAGAGACGTCGAAGAAGGTTATCAAGTTTTTAACTTAGACCTTCTGTGACAGCAGCTCTAACACTAGAAGAGGAAATGAAATGATGAGGCTTCTTGTGACAACCATTGTCGGAGTTGTGATTGGTATTTTCTTAGGCGTGTCGTTTCCTACTCTTTCATTGACCAAGGCAAGGGAGTTACTTTGGCTTTTGAATTTAATAAGATACATAAATATTTAATCAGGGTGGATCTTTATGATGTAGAATCCATGTCTGTTCTGAATTCTAACTGTATTTGAAGAGTAAATGCACACACACACGCGCGAAAAAACACACTCACTGCTAAGTGCTCCCCTGATTTAATGCCTCATTTTTCTCTTTTAAGTGACTATTTGTATAAGAGCTGATAAGATGATCTGCTTGTGTATTTCAATGTTGCAGCTGAACTTACCTTCTAATCTTTTTGGGTTAATTAATCTCACTTACATTGAGGAGAAGTATTCAGGCCTCTCAACGCAAGATCTATTAAATGTCTTGTCTTCCCTTAAGAGATACAGAGGCCATTCACACGGCCACAAGCATTCCGACACAAAGGTAATAACATTTGCCTCTTATACGGGCTCCAAGCAGCTTCTCTTGAGGCTTTGGTGCTACAATTTTATTGTTTCCATTTTATTATTACATTCAGATATTGAGGGTCAACTTTAGTTATATAGAGATAAGATTGTACCAAGTCTCTTGGAAATTTATACCTCCTTTCAAGACTTACGCTATTTGCACAAATATTGCAGATTTGGGTTCCATCAAACCCTCGAGGTGCTGAGAGGCTACCAG</genome_strand>
        <mrna_strand>GCCCCTTCAG.....................................................................................................................................................................GGTTGACTATAATGCAATACTTTTGTGGATCACTGAAGTCAACTGTTTGCGGCTTCTCCTTTTTGTGATTCTGAAATCTCCGAGGAGAATGGGTTCACCTACGCGCAG..................................................................................................CAGCTCTAACACTAGAAGAGGAAATGAAATGATGAGGCTTCTTGTGACAACCATTGTCGGAGTTGTGATTGGTATTTTCTTAGGCGTGTCGTTTCCTACTCTTTCATTGACCAAG............................................................................................................................................................................................................................................................CTGAACTTACCTTCTAATCTTTTTGGGTTAATTAATCTCACTTACATTGAGGAGAAGTATTCAGGCCTCTCAACGCAAGATCTATTAAATGTCTTGTCTTCCCTTAAGAGATACAGAGGCCATTCACACGGCCACAAGCATTCCGACACAAAG.....................................................................................................................................................................................................ATTTGGGTTCCATCAAACCCTCGAGGTGCTGAGAGGCTACCAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0034H10-9CaQU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U580047" ref_strand="+" ref_description="SGN-U580047 Tomato 200607#2 [9 ESTs aligned] (*GB) gi|157345382|emb|CAO14680.1| (e_value=1e-95) unnamed; (*ATH) AT1G67850.2 (e_value=3e-89) | Symbol: None | expressed protein, contains Pfam profile PF05212: Protein of unknown function (DUF707) | chr1:25441633-25445782 FORWARD | Aliases: None; ">
      <seq>taaaagaaaagaggactggtcttcatgtgtttggattttgagtttacttgcaacgacatctcgacaaagaatacatatccttttgacaattccaaggttggatattttcctatattaaagattccgatgaacattgaaaacttaacaacatcccaaattttgattttggttgaagcatagattcttactttcctaatctttcagatcagctacttcaacttcaggaatctcccaactcatatttgggctaagcagatgttagtccttttctgattctgaaaaggattgtgagcttgtgactaagatggggacgcctatgaaacgcagctcaaactcgagaagacggaatgaaaagatgaggctttttgtgactacttttattggagttgtattcgggtttttcctaggtgtaacttttcctacaatttcattgtccaagctgcccttacctacgaatcttatcccatcgattgatctacctgacatggaaaagtcaggcctctcaactcaagctctattaaatgttttgaattccttgaaggatcgtgttggcagttcacacaagaataaggccgcgaagatttgggttccatcaaatcccagaggcgccgagaggctacccccgggtattgtagcatctgaatctgatctttatactcgaaggctgtggggactgccaagtgaggacttgatcatcaagccaaggtaccttgtgaccttcacagttggcctcaagcagaagagtaacattgatgcagcagtgaaaaagttttcagagaactttaccattatgctgtttcactatgacggccgaacaactgaatgggatgaccttgagtggtcagcacgggctatccatgtcagtacaccgaaacagactaaatggtggtatgcaaaacgttttctacatcctgacattgtagcaccatatgactatatattcatctgggatgaagacttggggcttgaaaattttaacgcggaggaatatataaagttggtgacgaaacatggtttgaatatttcacagcctggtttagaaccaaacagtgggttgacatggcagatgacaaaagggagaaatgacactgaagtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0034H10-9CaQU/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0034H10.2" temp_strand="+" temp_description="C02SLe0034H10.2  AC215453.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0034H10 sequenced_by:kribb upload_account_name:korea">
        <position start="56240" stop="59840"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="56539" g_stop="56762" g_length="224"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="224" r_length="224" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="56763" i_stop="57024" i_length="262">
            <donor d_prob="0.950" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="57025" g_stop="57127" g_length="103"/>
          <reference_exon_boundary r_type="cDNA" r_start="225" r_stop="327" r_length="103" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="57128" i_stop="57235" i_length="108">
            <donor d_prob="0.269" d_score="1.00"/>
            <acceptor a_prob="0.650" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="57236" g_stop="57347" g_length="112"/>
          <reference_exon_boundary r_type="cDNA" r_start="328" r_stop="439" r_length="112" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="57348" i_stop="57466" i_length="119">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="57467" g_stop="57607" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="440" r_stop="580" r_length="141" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="57608" i_stop="57769" i_length="162">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.929" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="57770" g_stop="57874" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="581" r_stop="685" r_length="105" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="57875" i_stop="58386" i_length="512">
            <donor d_prob="0.904" d_score="1.00"/>
            <acceptor a_prob="0.941" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="58387" g_stop="58470" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="686" r_stop="769" r_length="84" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="58471" i_stop="59045" i_length="575">
            <donor d_prob="0.864" d_score="1.00"/>
            <acceptor a_prob="0.860" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="59046" g_stop="59161" g_length="116"/>
          <reference_exon_boundary r_type="cDNA" r_start="770" r_stop="885" r_length="116" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="59162" i_stop="59249" i_length="88">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.946" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="59250" g_stop="59351" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="886" r_stop="987" r_length="102" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="59352" i_stop="59431" i_length="80">
            <donor d_prob="0.981" d_score="1.00"/>
            <acceptor a_prob="0.899" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="59432" g_stop="59540" g_length="109"/>
          <reference_exon_boundary r_type="cDNA" r_start="988" r_stop="1096" r_length="109" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0034H10.2" gen_strand="+" ref_id="SGN-U580047" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>1096</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0034H10.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U580047" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="56539" e_stop="56762"/>
          <exon e_start="57025" e_stop="57127"/>
          <exon e_start="57236" e_stop="57347"/>
          <exon e_start="57467" e_stop="57607"/>
          <exon e_start="57770" e_stop="57874"/>
          <exon e_start="58387" e_stop="58470"/>
          <exon e_start="59046" e_stop="59161"/>
          <exon e_start="59250" e_stop="59351"/>
          <exon e_start="59432" e_stop="59540"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAAAGAAAAGAGGACTGGTCTTCATGTGTTTGGATTTTGAGTTTACTTGCAACGACATCTCGACAAAGAATACATATCCTTTTGACAATTCCAAGGTTGGATATTTTCCTATATTAAAGATTCCGATGAACATTGAAAACTTAACAACATCCCAAATTTTGATTTTGGTTGAAGCATAGATTCTTACTTTCCTAATCTTTCAGATCAGCTACTTCAACTTCAGGTTCGATTCCATTCAAGATTCAAGATTTCAACTTCAAACACTTCAAGAAAATTTATTGCTTCTTTTTTAGGCTAATATTTGGCTACTGTTTGTCCAAGATTGCAATTATTTGTCTTTTAGTAATATTTGAACTTACTAGCATAGACCAAGTTAAGTAGTAATTAATAAATCTTTGAGATATAACGAATGGGAAAATGGGAACTTTACTCAAAAGTGTTCAGTAATTGCAAAGTACTGATCTTTTTTTGCTTTCTGGTTTTAGGAATCTCCCAACTCATATTTGGGCTAAGCAGATGTTAGTCCTTTTCTGATTCTGAAAAGGATTGTGAGCTTGTGACTAAGATGGGGACGCCTATGAAACGCAGGTTCTTGATTTGACACAAATTTATTCATATAAGCATCCCAACTGATTCAGGATTGAGGCGTAATTGATTGGTTGATCCATTTATTTATTTACTGCTGAATTTCCACAGCTCAAACTCGAGAAGACGGAATGAAAAGATGAGGCTTTTTGTGACTACTTTTATTGGAGTTGTATTCGGGTTTTTCCTAGGTGTAACTTTTCCTACAATTTCATTGTCCAAGGCAAGGGGAACTACTTTTAATCCATTTCAATCTTAATATAAACATATTTGATGGGGACATTTTATTTTTAAGTCTCAGTTGAATAAGAGCTAATGAGGTAATGTGCTTCAATTTTGCAGCTGCCCTTACCTACGAATCTTATCCCATCGATTGATCTACCTGACATGGAAAAGTCAGGCCTCTCAACTCAAGCTCTATTAAATGTTTTGAATTCCTTGAAGGATCGTGTTGGCAGTTCACACAAGAATAAGGCCGCGAAGGTATTTTACTTGTCTTTCCTGTAGGTTCCATCAGCTTCTTGTTACTTGTCACTGTTTGTTATAGCAGATACTCCTAAAAGATTGCACCTCCATGATTCCATCTTTTGGAAGTTCGTATACCAATTGATGTTCAATATTTATGCTATTTGGGAGATCTTGCAGATTTGGGTTCCATCAAATCCCAGAGGCGCCGAGAGGCTACCCCCGGGTATTGTAGCATCTGAATCTGATCTTTATACTCGAAGGCTGTGGGGACTGCCAAGTGAGGTCTGTCAATTCTGCATGTATGCCTATTGAAGTACTCTATTGATTCTTCTCATTACTTGTCAACAATTACTAGTTCATGTTATGTGAATTGATGGCATTATTTGTGGCTTAAAATGCAAAAAAAAAAATAAAATCATCCATGGCATTATGTTAATTGGAGGAACGGTTTTCATACAAGCAAAATTGGAAGGAGGGTGTTCATATCAGACACATGTTAGATGAATATGGAAAGAGTATCTGAATAAGATATATTGAGGGAGCTGCTGAAGTGGACTGATAGATACATACTTGCATGCTTCTGGTTTCTAGTGCTCAAAAAAACATTCTATAATGATTGGTGAGAACAGGTTCAACGGCAGCTAAAATGTGATTTTAGAATGTCATTGTGCTTTAAAAGTGAACGATGTCCATGTCTCTCTCTCCTTTCCTTACCTTTATTTTTGGAATGAGAAAACATAATGATTATGTATGGTGTCCCTCTAGCATAATCAGCTCCATTAATTGATATGCAGGACTTGATCATCAAGCCAAGGTACCTTGTGACCTTCACAGTTGGCCTCAAGCAGAAGAGTAACATTGATGCAGCAGTGAAAAAGGTTGTGCTCAAGTTTCTCTATCTCATTTTCCTTGAAGTCGCTCTTTTGAGCACTACTCTGTGCTTTTGGAGGTTATTTTGTTCATGTATAAGGGCCAGAAGTGTAACTAATTTTTTTCTTTTCTTGAGCATGTGTCTTGCGTTGTTTTATGTGCAATACCTTGGCTGTTCTTATCTATAATGTTTCCCTTAGTTCCTGTTGCATGTATGTAAATTTATTGATGAATCTCTGAAAATCATTAAGAATCAATCTTATTGTCCATCCCACATTTTATCTCATCACAGAATTGGAATTACCAGAGACGGGCACTCATTTTAGGGTGGCTAGCACCATACATAGAGGTCTCATTTTACTATTGCCCAGTATTGGCTCTTGCTACACATATAAGTCTTGGTTTCTTGTTCCTTTGAAAATTTTAAAGCTTTCTGTTATTATCAAGGCCCACCATTGGTTGTTGGATGAGTGCTAAGTTGGATTGTTTGCCACTCATGATTTACATTTCAAATGGAACATAAAAATGTAGGTTAAAGGTGGACTGTTGTATCATTACATTCTTATTCTTGTATTGTAAACAGTTTTCAGAGAACTTTACCATTATGCTGTTTCACTATGACGGCCGAACAACTGAATGGGATGACCTTGAGTGGTCAGCACGGGCTATCCATGTCAGTACACCGAAACAGACTAAATGGTACCTTTCTTGTAAATTCTTTCTATCCTCAATTCTTCAACATATTTGATGGATATGTAAGTGCAGTGTTTATTCATTTTGTTGAAAGGTGGTATGCAAAACGTTTTCTACATCCTGACATTGTAGCACCATATGACTATATATTCATCTGGGATGAAGACTTGGGGCTTGAAAATTTTAACGCGGAGGAGTAAGTGATTATAATTAGAGCCATGTGAATCAACAAATATATTGAATTATGTGGAGTCTTAAGGCTTAATGCAAATGCAGATATATAAAGTTGGTGACGAAACATGGTTTGGATATTTCACAGCCTGGTTTAGAACCAAACAGTGGGTTGACATGGCAGATGACAAAAGGGAGAAATGACACTGAAGTT</genome_strand>
        <mrna_strand>TAAAAGAAAAGAGGACTGGTCTTCATGTGTTTGGATTTTGAGTTTACTTGCAACGACATCTCGACAAAGAATACATATCCTTTTGACAATTCCAAGGTTGGATATTTTCCTATATTAAAGATTCCGATGAACATTGAAAACTTAACAACATCCCAAATTTTGATTTTGGTTGAAGCATAGATTCTTACTTTCCTAATCTTTCAGATCAGCTACTTCAACTTCAG......................................................................................................................................................................................................................................................................GAATCTCCCAACTCATATTTGGGCTAAGCAGATGTTAGTCCTTTTCTGATTCTGAAAAGGATTGTGAGCTTGTGACTAAGATGGGGACGCCTATGAAACGCAG............................................................................................................CTCAAACTCGAGAAGACGGAATGAAAAGATGAGGCTTTTTGTGACTACTTTTATTGGAGTTGTATTCGGGTTTTTCCTAGGTGTAACTTTTCCTACAATTTCATTGTCCAAG.......................................................................................................................CTGCCCTTACCTACGAATCTTATCCCATCGATTGATCTACCTGACATGGAAAAGTCAGGCCTCTCAACTCAAGCTCTATTAAATGTTTTGAATTCCTTGAAGGATCGTGTTGGCAGTTCACACAAGAATAAGGCCGCGAAG..................................................................................................................................................................ATTTGGGTTCCATCAAATCCCAGAGGCGCCGAGAGGCTACCCCCGGGTATTGTAGCATCTGAATCTGATCTTTATACTCGAAGGCTGTGGGGACTGCCAAGTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTTGATCATCAAGCCAAGGTACCTTGTGACCTTCACAGTTGGCCTCAAGCAGAAGAGTAACATTGATGCAGCAGTGAAAAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTCAGAGAACTTTACCATTATGCTGTTTCACTATGACGGCCGAACAACTGAATGGGATGACCTTGAGTGGTCAGCACGGGCTATCCATGTCAGTACACCGAAACAGACTAAATG........................................................................................GTGGTATGCAAAACGTTTTCTACATCCTGACATTGTAGCACCATATGACTATATATTCATCTGGGATGAAGACTTGGGGCTTGAAAATTTTAACGCGGAGGA................................................................................ATATATAAAGTTGGTGACGAAACATGGTTTGAATATTTCACAGCCTGGTTTAGAACCAAACAGTGGGTTGACATGGCAGATGACAAAAGGGAGAAATGACACTGAAGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0034H10-9CaQU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U576636" ref_strand="+" ref_description="SGN-U576636 Tomato 200607#2 [2 ESTs aligned] ">
      <seq>gcacttgacagctctgcgacgagattcaattggagagtatacagcggatgatgcttgggaatttaaagaattggaagaggcaatcaccaaaggatatttgtaagatttttttgaggttccatgggacagagttatccagtacatgtctgtgctggtaagaagctgcaggtatcagcggaatagtctgggtgccaacaagctggcttgcacaccaccattgaagaagaaacagttgttggaaattccacatttttggtggcaattggagatctatacatacttatcttctgtctagctacttcaacaaagggacagtagttttttcaccttctcctccacattacctctttccttgtgggcgaaaagtgttgtgatggaacctttataacatatagattaggaagaactgtaatatatctttgtctttcagtcattgctggtaatctggcacaactcaaagtgtcaagtgccatgaaaaatacatattttttatctgttattagatcagttctgttaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0034H10-9CaQU/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0034H10.2" temp_strand="-" temp_description="C02SLe0034H10.2  AC215453.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0034H10 sequenced_by:kribb upload_account_name:korea">
        <position start="62124" stop="60718"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="61825" g_stop="61794" g_length="32"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="32" r_length="32" r_score="0.969"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="61793" i_stop="61502" i_length="292">
            <donor d_prob="0.988" d_score="0.00"/>
            <acceptor a_prob="0.949" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="61501" g_stop="61018" g_length="484"/>
          <reference_exon_boundary r_type="cDNA" r_start="33" r_stop="517" r_length="485" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0034H10.2" gen_strand="-" ref_id="SGN-U576636" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>516</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0034H10.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U576636" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="61825" e_stop="61794"/>
          <exon e_start="61501" e_stop="61018"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCACTTGACAGCTCTGCGACGAGATTCAATTGGTAAGACACTGTTATTTTGAATTCGGTTATTTATAGTTAGTCCTGAAAGTCTAGCTTGTCATGTTTACATACGAGAGGTCTGCATTGCTGCCTGTGAGCAGATCGTAGTCAGGGTTTACAACAATGTTATTGTAGTATTAGAGAATGTTGCCTGAATCTTGCTCCTAATAACATGGCAAGAACACCATTATATGCCTTTTATCTGAAGTAGTCTTGAATTCCACAAGCCAAATCAATCCTGATTCCTTCAAGTACTTGTTCAGTAGCTCATTGTGCTCTCTTTACCTCACAGGAGAGTATACAGCGGATGATGCTTGGGAATTTAAAGAATTGGAAGAGGCAATCACCAAAGGATATTTGTAAGATTTTTTTGAGGTTCCATGGGACAGAGTTATCCAGTACATGTCTGTGCTGGTAAGAAGCTGCAGGTATCAGCGGAATAGTCTGGGTGCCAACAAGCTGGCTTGCACACCACCATTGAAGAAGAAACAGTTGTTGGAAATTCCACATTTTTGGTGGCAATTGGAGATCTATACATACTTATCTTCTGTCTAGCTACTTCAACAAAGGGACAGTAGTTTTTTCACCTTCTCCTCCACATTACCTCTTTCCTTGTGGGCGAAAAGTGTTGTGATGGAACCTTTATAACATATAGATTAGGAAGAACTGTAATATATCTTTGTCTTTCAGTCATTGCTGGTAATCTGGCACAACTCAAAGTGTCAAGTGCCATGAAAAATACATA-TTTTTATCTGTTATTAGATCAGTTCTGTTAA</genome_strand>
        <mrna_strand>GCACTTGACAGCTCTGCGACGAGATTCAATTG....................................................................................................................................................................................................................................................................................................GAGAGTATACAGCGGATGATGCTTGGGAATTTAAAGAATTGGAAGAGGCAATCACCAAAGGATATTTGTAAGATTTTTTTGAGGTTCCATGGGACAGAGTTATCCAGTACATGTCTGTGCTGGTAAGAAGCTGCAGGTATCAGCGGAATAGTCTGGGTGCCAACAAGCTGGCTTGCACACCACCATTGAAGAAGAAACAGTTGTTGGAAATTCCACATTTTTGGTGGCAATTGGAGATCTATACATACTTATCTTCTGTCTAGCTACTTCAACAAAGGGACAGTAGTTTTTTCACCTTCTCCTCCACATTACCTCTTTCCTTGTGGGCGAAAAGTGTTGTGATGGAACCTTTATAACATATAGATTAGGAAGAACTGTAATATATCTTTGTCTTTCAGTCATTGCTGGTAATCTGGCACAACTCAAAGTGTCAAGTGCCATGAAAAATACATATTTTTTATCTGTTATTAGATCAGTTCTGTTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0034H10-9CaQU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U603939" ref_strand="+" ref_description="SGN-U603939 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|157345383|emb|CAO14681.1| (e_value=9e-47) unnamed; (*ATH) AT5G14460.1 (e_value=2e-45)  Symbol: None | pseudouridylate synthase TruB family protein, similar to SP:P09171 tRNA pseudouridine synthase B (EC 4.2.1.70) (tRNA pseudouridine 55 synthase) (Pseudouridylate synthase) (Uracil hydrolyase) {Escherichia coli O157:H7}; contains Pfam p... ; (*SWP) sp|Q9RB36|TRUB_FLAJO (e_value=3e-22) tRNA pseudouridine synthase B OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) GN=truB; ">
      <seq>ggcttaacaaaagtgaaaaaggttggccatgctggaacacttgatcctatggcaactggattattgattgtatgtgttggtaaatctacaaagatcgttgacagctatcagggtatgactaagggctacagtgggatcttccgtttgggagaagccacctctacctgggatgcagattccccggttattcaacgagagccatgggagcatatcaaggatgaggacataaagaaaacggcagcatccttttttggagagatatggcaagtccctccgatgttctcagcaatcaaagtaagtttatttttgttgcagcacttccgatcgtccaattttttattttgctgaacatgtagtgtgcctctgcatattttgataatgtaccgaattattacatcacttccttaccctggagaatagaattagtgataccaaattaacacttcctcaaacaattcattcttaaagttttcaacatgcttaattgtattgaagtcatgttgtttatcgatctcatgaaaagaaagcgtgttgaatcaacttcagctata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0034H10-9CaQU/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0034H10.2" temp_strand="-" temp_description="C02SLe0034H10.2  AC215453.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0034H10 sequenced_by:kribb upload_account_name:korea">
        <position start="65013" stop="62661"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64714" g_stop="64694" g_length="21"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="21" r_length="21" r_score="0.952"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64693" i_stop="63898" i_length="796">
            <donor d_prob="0.687" d_score="0.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63897" g_stop="63815" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="22" r_stop="104" r_length="83" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63814" i_stop="63661" i_length="154">
            <donor d_prob="0.042" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="63660" g_stop="63582" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="105" r_stop="183" r_length="79" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="63581" i_stop="63329" i_length="253">
            <donor d_prob="0.939" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="63328" g_stop="62961" g_length="368"/>
          <reference_exon_boundary r_type="cDNA" r_start="184" r_stop="551" r_length="368" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0034H10.2" gen_strand="-" ref_id="SGN-U603939" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>551</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0034H10.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U603939" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64714" e_stop="64694"/>
          <exon e_start="63897" e_stop="63815"/>
          <exon e_start="63660" e_stop="63582"/>
          <exon e_start="63328" e_stop="62961"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGCTTAACAAAAGTGAAAAAGGTATATCTTTCCTAAGAACAATGTAGGGACTATTTGATATGGTCTTGGAGAAGCAGTATGCAAACTCGCTTTAAAAATATTTCAGGATAAGCTTTTTATGGTAATCTTTTGTATTTGAAGGTGCATTAGCACGTCAGTCTTAGGAAGAAGAATGCAAGTTAAAATTATTTGGATGAATGTTTTCACTTTAACTTTGAGTCTGTACTTTGGTTATATCCATGCTGATTAATAGAACTCTTACATTAAAAAGTAGGAGCTTGAATAAAGTTTTGATTTTTGTCTGTAGATTTACTATTTTGATTTTCTTCTAAGATATCCATTCCTAATGTAAGATACTGAAATCTTAGAATTCTAACATGAGTATCAATTCCCTTCATCAAGTTTTCTTTATTCTTTTTGGTGTTGGACCCTCCATTAAATCTAGTCTGCTAGCCAGAAGACTTTATTCAGTAAAGTTAGAGCTGTGGAGTATGGGCTTAAGAAGATGCTGGGCATATAGAAAAAAAGAGTATCTAGAAAATTTTGGGGAATTAGGGTACATTTCTAAGCATTTTGTTACCTCCTCCACCAAATTTTTATTTTAAATTGAAGACCTTCAAACAAACTTCTGTTTCTAAAAAAATTGTGCCACTCTATCAGGAGGGGGCAGGTTTTTATGTCTTATTCATTTGATTTGATTGGGGGTTTTATGCTTATGTTCACGTGGTTGGGGGCATTTTTCACTTTCTGACTTAATACAAACTGCACTGAGGCATTTCATGCTTACCAGCTTCTCGTTCAATGTAATCTTTTGCAGGTTGGCCATGCTGGAACACTTGATCCTATGGCAACTGGATTATTGATTGTATGTGTTGGTAAATCTACAAAGATCGTTGACAGGTAATAAGGTTTTAGATGATTAAACTGAGGGAGATTTCAGGGGTTCCTAAAATTTCATGAGACTTTCTTCCTGCTAATTTCCCTCTGTCTTAAGAGAACTTATCCATGTCTATGGGAAGTTATGTAATAACTTAAGTTGAATTGTTCTTGGCAGCTATCAGGGTATGACTAAGGGCTACAGTGGGATCTTCCGTTTGGGAGAAGCCACCTCTACCTGGGATGCAGATTCCCCGGTATTTAGTTGTTTTTTTTGAAGTTATATTTCTTCAGATAAATCTGGAATGTGTGGCTTATTTCACCCACACGAAAGTCTCATTTAATCATCAGCAACACAAATTAAGATGGAAAGATGAGAAATTTCGTGATAAAGCCATCATGAATAAAGTCTACACACTCACACTAGTTGATGTTACATAAACAGGATCTAGTTATTTGTTTACCCCAGGTTTCATCTTACCTATGAATTTTGGATTTTGCAATGTTCAGGTTATTCAACGAGAGCCATGGGAGCATATCAAGGATGAGGACATAAAGAAAACGGCAGCATCCTTTTTTGGAGAGATATGGCAAGTCCCTCCGATGTTCTCAGCAATCAAAGTAAGTTTATTTTTGTTGCAGCACTTCCGATCGTCCAATTTTTTATTTTGCTGAACATGTAGTGTGCCTCTGCATATTTTGATAATGTACCGAATTATTACATCACTTCCTTACCCTGGAGAATAGAATTAGTGATACCAAATTAACACTTCCTCAAACAATTCATTCTTAAAGTTTTCAACATGCTTAATTGTATTGAAGTCATGTTGTTTATCGATCTCATGAAAAGAAAGCGTGTTGAATCAACTTCAGCTATA</genome_strand>
        <mrna_strand>GGCTTAACAAAAGTGAAAAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGGCCATGCTGGAACACTTGATCCTATGGCAACTGGATTATTGATTGTATGTGTTGGTAAATCTACAAAGATCGTTGACAG..........................................................................................................................................................CTATCAGGGTATGACTAAGGGCTACAGTGGGATCTTCCGTTTGGGAGAAGCCACCTCTACCTGGGATGCAGATTCCCCG.............................................................................................................................................................................................................................................................GTTATTCAACGAGAGCCATGGGAGCATATCAAGGATGAGGACATAAAGAAAACGGCAGCATCCTTTTTTGGAGAGATATGGCAAGTCCCTCCGATGTTCTCAGCAATCAAAGTAAGTTTATTTTTGTTGCAGCACTTCCGATCGTCCAATTTTTTATTTTGCTGAACATGTAGTGTGCCTCTGCATATTTTGATAATGTACCGAATTATTACATCACTTCCTTACCCTGGAGAATAGAATTAGTGATACCAAATTAACACTTCCTCAAACAATTCATTCTTAAAGTTTTCAACATGCTTAATTGTATTGAAGTCATGTTGTTTATCGATCTCATGAAAAGAAAGCGTGTTGAATCAACTTCAGCTATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0034H10-9CaQU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U573431" ref_strand="+" ref_description="SGN-U573431 Tomato 200607#2 [3 ESTs aligned] ">
      <seq>ggaacaacataaatctctctaacgaaccaaatctttactcatacaacattatctgccaaatcattccagaaattcttaatcaatcaatacaacataatcacgaaaattttttatttttaaagtttgaagatcccgttacatattatacctcgagaagtagtatgttttagtggtgtgggttgaaggtttttaccaagaaagaggaacgatactgtcactgcaagtcgccaaaaatggcgaagtcagtagtaattcctcgcatgtctctcatcttcctccgctccaaatccatctctcagccacgcaccgtcttctttccctcaatgctcaattcccttttgctcaaatcccattcacttcactttttctctacaacttcaaccccatacccacttcaatacgaaatgataatctcccgccctgcaaacccaccttcaccaaccctaaaatctcgccaacaacgcttccttcccaagtcaaaacctaatgattcagaacccctacccggttcagaactagggttcgacgattgggtcgacagaaaattgaatatgaaatcttcttctgcac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0034H10-9CaQU/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0034H10.2" temp_strand="-" temp_description="C02SLe0034H10.2  AC215453.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0034H10 sequenced_by:kribb upload_account_name:korea">
        <position start="66843" stop="65675"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="66544" g_stop="65975" g_length="570"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="570" r_length="570" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0034H10.2" gen_strand="-" ref_id="SGN-U573431" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>570</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0034H10.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U573431" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="66544" e_stop="65975"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAACAACATAAATCTCTCTAACGAACCAAATCTTTACTCATACAACATTATCTGCCAAATCATTCCAGAAATTCTTAATCAATCAATACAACATAATCACGAAAATTTTTTATTTTTAAAGTTTGAAGATCCCGTTACATATTATACCTCGAGAAGTAGTATGTTTTAGTGGTGTGGGTTGAAGGTTTTTACCAAGAAAGAGGAACGATACTGTCACTGCAAGTCGCCAAAAATGGCGAAGTCAGTAGTAATTCCTCGCATGTCTCTCATCTTCCTCCGCTCCAAATCCATCTCTCAGCCACGCACCGTCTTCTTTCCCTCAATGCTCAATTCCCTTTTGCTCAAATCCCATTCACTTCACTTTTTCTCTACAACTTCAACCCCATACCCACTTCAATACGAAATGATAATCTCCCGCCCTGCAAACCCACCTTCACCAACCCTAAAATCTCGCCAACAACGCTTCCTTCCCAAGTCAAAACCTAATGATTCAGAACCCCTACCCGGTTCAGAACTTGGGTTCGACGATTGGGTCGACAGAAAATTGAATTTGAAATCTTCTTCTCCAC</genome_strand>
        <mrna_strand>GGAACAACATAAATCTCTCTAACGAACCAAATCTTTACTCATACAACATTATCTGCCAAATCATTCCAGAAATTCTTAATCAATCAATACAACATAATCACGAAAATTTTTTATTTTTAAAGTTTGAAGATCCCGTTACATATTATACCTCGAGAAGTAGTATGTTTTAGTGGTGTGGGTTGAAGGTTTTTACCAAGAAAGAGGAACGATACTGTCACTGCAAGTCGCCAAAAATGGCGAAGTCAGTAGTAATTCCTCGCATGTCTCTCATCTTCCTCCGCTCCAAATCCATCTCTCAGCCACGCACCGTCTTCTTTCCCTCAATGCTCAATTCCCTTTTGCTCAAATCCCATTCACTTCACTTTTTCTCTACAACTTCAACCCCATACCCACTTCAATACGAAATGATAATCTCCCGCCCTGCAAACCCACCTTCACCAACCCTAAAATCTCGCCAACAACGCTTCCTTCCCAAGTCAAAACCTAATGATTCAGAACCCCTACCCGGTTCAGAACTAGGGTTCGACGATTGGGTCGACAGAAAATTGAATATGAAATCTTCTTCTGCAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0034H10-9CaQU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U581110" ref_strand="+" ref_description="SGN-U581110 Tomato 200607#2 [2 ESTs aligned] ">
      <seq>caatttaggccagcgaattatacaattgtatatgtatagcaaattatacagttttatgtttgctatgcagcgcaattatgcaaagtttgctagcatacaaatatgaattttttatttgctatatgtaaaagttgcccaataatgtatcatggacatatgaaaatagttcttccaaaatcagtttatctccgagttaatactttagatggtcattcaactaatctttgtgctcaaaaccccgattcaaatagtcatttgtttggtatcgccgaaggagcgggaacggtcattctaactcttctcgggggattccacccatactttctctcaaaaagtcactcaactttcaatttttccttaaaagtattcaattatccatacatttctcaaaaagtgactcaactttgaattttaactcaaaagtgactcaactatttattttttcctcaagtcactcaatctattaaattactttttaaattaaaatttatttacgttaattgtttatataacaaatcaaaattttttaaaaaaataaaaaatactatttagtgatccacccacctaacccgacccattaaaaaatataatatgaaccattttattttacccttaattctaaattattccctctctttctcctctacatttaatatatacacatagcttatttaattcgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0034H10-9CaQU/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0034H10.2" temp_strand="+" temp_description="C02SLe0034H10.2  AC215453.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0034H10 sequenced_by:kribb upload_account_name:korea">
        <position start="66869" stop="68149"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="67169" g_stop="67849" g_length="681"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="681" r_length="681" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0034H10.2" gen_strand="+" ref_id="SGN-U581110" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>681</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0034H10.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U581110" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="67169" e_stop="67849"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAATTTAGGCCAGCGAATTATACAATTGTATATGTATAGCAAATTATACAGTTTTATGTTTGCTATGCAGCGCAATTATGCAAAGTTTGCTAGCATACAAATATGAATTTTTTATTTGCTATATGTAAAAGTTGCCCAATAATGTATCATGGACATATGAAAATAGTTCTTCCAAAATCAGTTTATCTCCGAGTTAATACTTTAGATGGTCATTCAACTAATCTTTGTGCTCAAAACCCCGATTCAAATAGTCATTTGTTTGGTATCGCCGAAGGAGCGGGAACGGTCATTCTAACTCTTCTCGGGGGATTCCACCCATACTTTCTCTCAAAAAGTCACTCAACTTTCAATTTTTCCTTAAAAGTATTCAATTATCCATACATTTCTCAAAAAGTGACTCAACTTTGAATTTTAACTCAAAAGTGACTCAACTATTTATTTTTTCCTCAAGTCACTCAATCTATTAAATTACTTTTTAAATTAAAATTTATTTACGTTAATTGTTTATATAACAAATCAAAATTTTTTAAAAAAATAAAAAATACTATTTAGTGATCCACCCACCTAACCCGACCCATTAAAAAATATAATATGAACCATTTTATTTTACCCTTAATTCTAAATTATTCCCTCTCTTTCTCCTCTACATTTAATATATACACATAGCTTATTTAATTCGAT</genome_strand>
        <mrna_strand>CAATTTAGGCCAGCGAATTATACAATTGTATATGTATAGCAAATTATACAGTTTTATGTTTGCTATGCAGCGCAATTATGCAAAGTTTGCTAGCATACAAATATGAATTTTTTATTTGCTATATGTAAAAGTTGCCCAATAATGTATCATGGACATATGAAAATAGTTCTTCCAAAATCAGTTTATCTCCGAGTTAATACTTTAGATGGTCATTCAACTAATCTTTGTGCTCAAAACCCCGATTCAAATAGTCATTTGTTTGGTATCGCCGAAGGAGCGGGAACGGTCATTCTAACTCTTCTCGGGGGATTCCACCCATACTTTCTCTCAAAAAGTCACTCAACTTTCAATTTTTCCTTAAAAGTATTCAATTATCCATACATTTCTCAAAAAGTGACTCAACTTTGAATTTTAACTCAAAAGTGACTCAACTATTTATTTTTTCCTCAAGTCACTCAATCTATTAAATTACTTTTTAAATTAAAATTTATTTACGTTAATTGTTTATATAACAAATCAAAATTTTTTAAAAAAATAAAAAATACTATTTAGTGATCCACCCACCTAACCCGACCCATTAAAAAATATAATATGAACCATTTTATTTTACCCTTAATTCTAAATTATTCCCTCTCTTTCTCCTCTACATTTAATATATACACATAGCTTATTTAATTCGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0034H10-9CaQU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U584836" ref_strand="+" ref_description="SGN-U584836 Tomato 200607#2 [9 ESTs aligned] (*GB) gi|157345384|emb|CAO14682.1| (e_value=1e-36) unnamed; (*ATH) AT3G27520.1 (e_value=2e-27) | Symbol: None | expressed protein | chr3:10193659-10194736 FORWARD | Aliases: MMJ24.7; ">
      <seq>tttcacaactcctaaaatactccagtgataggtctgcgctttactctttcaaagaggagtgcaactgctattgcaattttattttgaatttcagtcgatggcggcaggggattgggcaaacgaagacgaactggagctcgttaacgaggatggcttcgtctacaagcgtcggaagaagtttcatcttaacccaaccgctgctccgaagctaaaagatccggcagttgaggagaagaatcgactgcaaaggaagaaaaaggtgctcatgaaaatcaaagagagataccaaaacgagatcaaccagtgggaacttttatcaacaacattgagtgaaatgcagaaaagtcagccaaacccttatcaagaaagggacactctatcattcaacccgccggtcatgtcatcggatccgacttgccaaccccttgttgatcagctccttactcaggttgaagcacaggaggctgtaattggcaacatatcaaaactttgtgatgttgttgaagctgtctggactgcacaagaagaaaaaatgaaacagtcagttttggacctcccgatctgggcacacacacctggtgaacttatttcttccctgtgttcagattaagttctgcaagagaactttaccagggaaaaattacgtcgatgtgtcttcgggcttgttacctttattcagtttcttagtttgagtttgttttgtatatattcttcttggaccttcccgcttcaaatgatgggaatgaccacttagattcaggaatcctctgttgttggaaaggagtgagatgtggttgtgtaacatctttgtaatgtttaacatcttttccgtgttcacctgaatatttttgacagtcttgtcaaatttctttaagta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0034H10-9CaQU/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0034H10.2" temp_strand="+" temp_description="C02SLe0034H10.2  AC215453.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0034H10 sequenced_by:kribb upload_account_name:korea">
        <position start="67671" stop="71000"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="67971" g_stop="68418" g_length="448"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="448" r_length="448" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="68419" i_stop="70270" i_length="1852">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="70271" g_stop="70700" g_length="430"/>
          <reference_exon_boundary r_type="cDNA" r_start="449" r_stop="877" r_length="429" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0034H10.2" gen_strand="+" ref_id="SGN-U584836" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>878</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0034H10.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U584836" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="67971" e_stop="68418"/>
          <exon e_start="70271" e_stop="70700"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCACAACTCCTAAAATACTCCAGTGATAGGTCTGCGCTTTACTCTTTCAAAGAGGAGTGCAACTGCTATTGCAATTTTATTTTGAATTTCAGTCGATGGCGGCAGGGGATTGGGCAAACGAAGACGAACTGGAGCTCGTTAACGAGGATGGCTTCGTCTACAAGCGTCGGAAGAAGTTTCATCTTAACCCAACCGCTGCTCCGAAGCTAAAAGATCCGGCAGTTGAGGAGAAGAATCGACTGCAAAGGAAGAAAAAGGTGCTCATGAAAATCAAAGAGAGATACCAAAACGAGATCAACCAGTGGGAACTTTTATCAACAACATTGAGTGAAATGCAGAAAAGTCAGCCAAACCCTTATCAAGAAAGGGACACTCTATCATTCAACCCGCCGGTCATGTCATCGGATCCGACTTGCCAACCCCTTGTTGATCAGCTCCTTACTCAGGTATGATTTACAGTTTTAAATTTGATTCCATTGTAATTCATTATTATAGCAACAATGTTAAGTTTGGAATGAAAATGGCAATCAACACAACTGCTTTAATCACCCTTGATTATTACCTTTGAGTTACCTGGGATTTGGGAAATTGTAATTTAGGGCAAGAAGAATAGAGAAGAGAGAGAAGAAAAGAAAGCGTGTGAGAGAGAGATAGGGCAGGTGCTTCCTCCCCTTCTATTGTGCTCTCCAATGGAAATTCCTCTACTCCTTGTTCATCAGCAATGAGGAGATTCAATTGCTTGCCCTTGCAAACATAGCAAGGATGGTAACTTTCTCCACATCTTCAATAAGCCCCTGGTGTGCCCTGTATTCTGGCTTGTCAGATCCTTCCACTCTCTTCATTCAACCAGTGCGCCGATGGTTAGTTATAAGGCCCCTTACTGTTTACCCTTTGATTCCTCCTTGCAATGGCCTCCACCATCTTCTCTTGCCATTTGGCAAACTTTGCTGTGTGGGATAGTGAAACAGGTTCCAGATTTTTCACCCCTTCCTTCAGTCCACCAATGAAACTTGACAGTAAGTGATCCTCTGGCACATTTGGGTTACAAATCCTCTGTCCTCAAACTTCTCAAGGAAGGCTCTCCAATGGTGGTTTGACTTAGCTTGTCTTCTCCACTGTAGAGTCCTGTTTTTTATCCTAAAATCTCCAGACCACTTCTCTACAAAACTCAAACCATCGGATGTTGCTGCAAGGGAGTGTGCAAGAGAAATACCGAGCCTCAGCCCTTCCTTCCAAATGCAGGTTGACAGCTTCCAATTTTTTATCACCATCTTCAATATTATAGGAGTTAAAATGCCTTTGATACCTCCTTACCCACGTTCTATGATCCTCAACCTCGAAAACTGAGAACTAAAATCCATGTGAAAATTGTGAGTTACCTCATCTGCTGGGGACAGAATCATAGGGACTGTCATCAATTGCGACCCCCCTTGGCCTTGGCAGTATTCCATCACCCCTGCTAGTAGCTCCCTCCTCTGCGAGGGCCTTCTTCGGATTTGCTAGATAGCCATTGATCCTTCCACTCATCCTTGCTAATGAGGTCTGGGAGTCCTCAATCATCATCTTCAGTTCCTCCAAGTTCGTGTCAGTTGCTCCCCATATAGTTCTGAAGCTGACTCTTCAGTTCCCAGAGATTTTCCTCCTGTTGCTACAATCGTGTAGCTTCAGCCTGTCATCGATACACGGGTTAATATCAATGGTCTGGTACCAAACGTAATGAGCTCAAATTCATGATAAGGTTCAAACAGTAAATTCAATTCCATTCCACAGTCAATCGGGATTACAGCAACAACGACAATACTAAACTAAGTTTGGAATGAAATGTGACTAATTATTACAATCAATTAGTAATAGACAAATCTACTATACGCCTTCAATCTCCCTCTATTATCACCATTGAATTGCCTGTGATTTGGGAAATTGTACTTTAGGGCAGGAAGAATAAAGAAAGAGAGAGAGAGAAGAAAAGAGAGCGAGATATGAAATTTACCAGAATTCATTCTGCTTCCCTCCCCTTGCTAAGACTTCTTATCCTTTCGTTGAACTTATTGTTTTGGTCAAATATCCTTTCCTTGAACTAATCGGAGCCCTTAGATGATAATGAATCACAGACTTAGTCGTTATAGCAGAAATATGGAATTGTCCAGCTAACCAAAATGACAAAGTCTGCTAACTCCCTTTATTGTCTACTTTTCTATCCTTGTGACACTTCTGTGATCAAAGCAAGTTATTGCCTTTAGGCAACGTTTAAACTTGAAAGTGCTAAATTCCATTTTTATTATGAATTACTTGGTACAGGTTGAAGCACAGGAGGCTGTAATTGGCAACATATCAAAACTTTGTGATGTTGTTGAAGCTGTCTGGACTGCACAAGAAGAAAAAATGAAACAGTCAGTTTTGGACCTCCCGATCTGGGCACACACACCTGGTGAACTTATTTCTTCCCTGTGTTCAGATTAAGTTCTGCAAGAGAACTTTACCAGGGAAAAATTACGTCGATGTGTCTTCGGGCTTGTTACCTTTATTCAGTTTCTTAGTTTGAGTTTGTTTTGTATATATTCTTCTTGGACCTTCCCGCTTCAAATGATGGGAATGACCACTTAGATTCAGGAATCCTCTGTTGTTGGAAAGGAGTGAGATGTGGTTGTGTAACATCTTTGTAATGTTTAACATCTTTTCCGTGTTCACCTGAATATTTTTGACAGTCTTGTCAATTTTTCTTTAAGTA</genome_strand>
        <mrna_strand>TTTCACAACTCCTAAAATACTCCAGTGATAGGTCTGCGCTTTACTCTTTCAAAGAGGAGTGCAACTGCTATTGCAATTTTATTTTGAATTTCAGTCGATGGCGGCAGGGGATTGGGCAAACGAAGACGAACTGGAGCTCGTTAACGAGGATGGCTTCGTCTACAAGCGTCGGAAGAAGTTTCATCTTAACCCAACCGCTGCTCCGAAGCTAAAAGATCCGGCAGTTGAGGAGAAGAATCGACTGCAAAGGAAGAAAAAGGTGCTCATGAAAATCAAAGAGAGATACCAAAACGAGATCAACCAGTGGGAACTTTTATCAACAACATTGAGTGAAATGCAGAAAAGTCAGCCAAACCCTTATCAAGAAAGGGACACTCTATCATTCAACCCGCCGGTCATGTCATCGGATCCGACTTGCCAACCCCTTGTTGATCAGCTCCTTACTCAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGAAGCACAGGAGGCTGTAATTGGCAACATATCAAAACTTTGTGATGTTGTTGAAGCTGTCTGGACTGCACAAGAAGAAAAAATGAAACAGTCAGTTTTGGACCTCCCGATCTGGGCACACACACCTGGTGAACTTATTTCTTCCCTGTGTTCAGATTAAGTTCTGCAAGAGAACTTTACCAGGGAAAAATTACGTCGATGTGTCTTCGGGCTTGTTACCTTTATTCAGTTTCTTAGTTTGAGTTTGTTTTGTATATATTCTTCTTGGACCTTCCCGCTTCAAATGATGGGAATGACCACTTAGATTCAGGAATCCTCTGTTGTTGGAAAGGAGTGAGATGTGGTTGTGTAACATCTTTGTAATGTTTAACATCTTTTCCGTGTTCACCTGAATATTTTTGACAGTCTTGTCAA-ATTTCTTTAAGTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0034H10-9CaQU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U582213" ref_strand="+" ref_description="SGN-U582213 Tomato 200607#2 [26 ESTs aligned] (*GB) gi|157345385|emb|CAO14683.1| (e_value=2e-164) unnamed; (*ATH) AT3G01640.1 (e_value=1e-161) | Symbol: None | GHMP kinase family protein, contains GHMP kinases putative ATP-binding protein domain, Pfam:PF00288 | chr3:239388-241450 FORWARD | Aliases: F4P13.18, F4P13_18; ">
      <seq>cagtagctaacgattagatctatagattccaatttctgcagtaacacctacaataagcaacaatggcggcagtgatcgagcacaagtcttacgctagagttggactgcttggaaaccctagcgatgtttattttgggaacactatatccttcagcctcgggaatttttgggcttctgttcgtttggaaccttctatagatctcgtcattgttcctcatccttctcacgatctcgtccaattcaattcaatttctcacctggtgaacaggttgcagaatgaggggtactatggaggggttcgtttacttatggcaatcgttaaaatatttcacaactattgcaaagagagcaacatcaccttacatgatgggaatttcactctctcgtatgacactaacattccccgccagacagggctttcaggttctagtgcaatcgtaagtgctgcactgagttgccttcttgatttttacaaagtcagacatctcatcaaagttgaggtaaggccgaaccttgtccttaatgcagagaaggaacttggaattgttgcaggtcttcaagatagagtggcccaggtgtatggaggcgttgtatatatggactttgacaagaatcacatggatgaattaggtcatggcatatatacacccatggatgttgatcttctcccacctctttatctgatctatgcagaaaatcccagtgattctggaaaggtacatagtacagttcgacaaagatggttagatggtgataaatttataagatcaaccattgaagaggttgcaaatatagctgtggagggacggaaagctcttcttgagaaggactacaataagttagcagccctcatgaatcacaattttgacttgagaaggcgtatgtttggagataatgcccttggagctatgaatatagagatggttgaaatcgctcgaaaggtaggtgctgcttccaagttcacaggaagtggtggggctgtggttgtgtactgtccggatggaacttcacaagtgaagcagctggaggacgcatgccacaaagctggtttcacttttcaaccaattaaagttatgccttcgtttctaaacgaaactgatcttcaaactctgaaatcaaagtgaaaatgatgatctgctttcaaatatgtcgagagtcctctttattctttatttctttcacctttcattggcatatgctaagcgcttttcaccaagtatgtagcgaccattgaaagaaatgctagtatagatagttttagttacaattgttttgctgctattgtaatgcatttcgagaagcgcttactttacagttttagcgtaaaccgtcattagattcacatattttaactccaattgtgtgatgccaattataattactactaaatctgttacttct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0034H10-9CaQU/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0034H10.2" temp_strand="-" temp_description="C02SLe0034H10.2  AC215453.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0034H10 sequenced_by:kribb upload_account_name:korea">
        <position start="74989" stop="71025"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="74689" g_stop="74430" g_length="260"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="260" r_length="260" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="74429" i_stop="74164" i_length="266">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="74163" g_stop="74014" g_length="150"/>
          <reference_exon_boundary r_type="cDNA" r_start="261" r_stop="410" r_length="150" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="74013" i_stop="73530" i_length="484">
            <donor d_prob="0.976" d_score="1.00"/>
            <acceptor a_prob="0.871" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="73529" g_stop="73341" g_length="189"/>
          <reference_exon_boundary r_type="cDNA" r_start="411" r_stop="599" r_length="189" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="73340" i_stop="73247" i_length="94">
            <donor d_prob="0.668" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="73246" g_stop="73130" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="600" r_stop="716" r_length="117" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="73129" i_stop="72746" i_length="384">
            <donor d_prob="0.752" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="72745" g_stop="72585" g_length="161"/>
          <reference_exon_boundary r_type="cDNA" r_start="717" r_stop="877" r_length="161" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="72584" i_stop="71849" i_length="736">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="71848" g_stop="71325" g_length="524"/>
          <reference_exon_boundary r_type="cDNA" r_start="878" r_stop="1401" r_length="524" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0034H10.2" gen_strand="-" ref_id="SGN-U582213" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>1401</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0034H10.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U582213" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="74689" e_stop="74430"/>
          <exon e_start="74163" e_stop="74014"/>
          <exon e_start="73529" e_stop="73341"/>
          <exon e_start="73246" e_stop="73130"/>
          <exon e_start="72745" e_stop="72585"/>
          <exon e_start="71848" e_stop="71325"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGTAGCTAACGATTAGATCTATAGATTCCAATTTCTGCAGTAACACCTACAATAAGCAACAATGGCGGCAGTGATCGAGCACAAGTCTTACGCTAGAGTTGGACTGCTTGGAAACCCTAGCGATGTTTATTTTGGGAACACTATATCCTTCAGCCTCGGGAATTTTTGGGCTTCTGTTCGTTTGGAACCTTCTATAGATCTCGTCATTGTTCCTCATCCTTCTCACGATCTCGTCCAATTCAATTCAATTTCTCACCTGGTATTCTATCTTATACTTCTCCTTTATTCATCTGTTTTACTTATACTGTTTTCGGTTATCAGGATATATTAGAATTATTGACATGCCAATGCGTTTATACTTTGGGATGCGTTTATCAGGATATATAATTGATGTTTAATTAATCATTGATTAGCCAATTCTGATTGGTATTTTCATAATCAAGATCAGAAATTTAACACTTTTTTTTTAGTTCTATGTGGATTCTCTTGCAGGTTGATTGAATTTGACTTAACACTTGGCTGTAGGTGAACAGGTTGCAGAATGAGGGGTACTATGGAGGGGTTCGTTTACTTATGGCAATCGTTAAAATATTTCACAACTATTGCAAAGAGAGCAACATCACCTTACATGATGGGAATTTCACTCTCTCGTATGACACTAACATTCCCCGCCAGGTAGAACCTAACATTGCAAGATTTATCTGCCCTTCGATAGATAAGTTATGTGGATTGGAATCACGTTAGCTAATTGTTGTTAAACTCTTACTAAACGTTCTTTGACTTGAAACTGCTCAAATATAGAGTGAGCTTCTGTTTATATGGTCCTATTGTTTGGTTTTGGAAATGTCTTTTCGTAGGTTTACAATTTATCTAAAATGTCTTAGTCGAGTAAAATAATTCTTTAATTTCAACCAGGCACAATCAAAACCTACATCTCGGACGTTGAAACTTTACATACTACCTTCTGGATTTTAGCTATGCAAATAAATTAGGAGTGAAATACATGCTTGTTTCAATCATAACTGACATTACATCACACTACTTCATGATCATGATCTGAATATGGCATTGCTATATGATGAATAAGATAAATAAAAGATTTGATTTATCTCATGTTGAAAAAGTTTGATTAACATATCAAATACTTTCCACATCTCAGACAGGGCTTTCAGGTTCTAGTGCAATCGTAAGTGCTGCACTGAGTTGCCTTCTTGATTTTTACAAAGTCAGACATCTCATCAAAGTTGAGGTAAGGCCGAACCTTGTCCTTAATGCAGAGAAGGAACTTGGAATTGTTGCAGGTCTTCAAGATAGAGTGGCCCAGGTGTATGGAGGCGTTGTATATATGGTGTGTATGTGTGATACTCTTTTTTATCTTTGACAAGTAGCTTGTAGTTGTAAAGTAAATATTGCATGTTCATCTTTAAACCTTTATTTTGCAGGACTTTGACAAGAATCACATGGATGAATTAGGTCATGGCATATATACACCCATGGATGTTGATCTTCTCCCACCTCTTTATCTGATCTATGCAGAAAATCCCAGTGATTCTGGAAAGGTTTGAACTTAATGTGCAGAATATGAGTGAAAAATCTCTGTTGTCTGGCCAAAGATTCTATAGATGAGTGTTATTTGCTTAGCCATGCAATGGGTTAGAATATTACATTTTGGTTTTCACTTCACACTAAGAATTAGACAACGAGTATTGATGTAGGCTTATAGTCCACGGGGCAGCCCCTTTATTTTCAGTAATTATTTAACAGGGTAACCTCTTATATGATTCCAGTATTTATTGAATATTTTCCAGACAATGGATGACATAACAATTGCAGCAGTTTCTCAAGGAATTGTGAATATCAGTGTCCGGATTAACTTTGTCACTAATAGTTACTTTGTTGACAGTAGTTACAAAATATAGATGATACTTTTTTTTCAAATGCAGGTACATAGTACAGTTCGACAAAGATGGTTAGATGGTGATAAATTTATAAGATCAACCATTGAAGAGGTTGCAAATATAGCTGTGGAGGGACGGAAAGCTCTTCTTGAGAAGGACTACAATAAGTTAGCAGCCCTCATGAATCACAATTTTGACTTGAGAAGGTAATATACATGCTTAGTTTAATGAGGGTTACATTTGTTAATATCTTTTATGTGCTTCGTGGCGTCCCCAACACCTATTTGATAGTGTCATGTGTCATGACCTGCCACCTTACCCTTCAAATTTTGCACTGGAAGAGGGGACGAAGAACCTAAAGTTGTGGAGAGGTCAGTGGAAGACTCTAGAATAACTTAGAAGATATCGTAGAAAGCTTTAGAATTCTCTAGACTAGTAGAGAATTCTAGAGCATGGACTAAAGTATAAATAAGAGTGATATGTGAAGTAAATATTATTTACTAGGTCCTAGGAAGTAGTATAAATAGAAGGGTCTCTCATTTGGAAGGCTTCCAAGAAGCAAGCAATCACTCAAGTTGTAAATAATGTTTCGAGCAATACAAAACCTTCTTATAAAACTCTCTTGTCTTTCTTTTCATTCTCTTAGCGACCTTAAGTGTAAATGACTTACTTGAGCTTACAAGACCTTGAAAGATTAGTGAGTAAGTAGTCGAGTGCTGGCTTTAGTGAGACTCTCTTAGTCCATGACAATATCATGACCCATTTGTTTTCATGTTATTACTTGTAACAATTTCATGTGCTGTCACAATGCACTTTTACCTCCCTTTTGCATCTTATTTCATGGTGTTATGATATACTCAAATATTGCTAAGATTTTATCACAGAAAGCAGGTAATATGATATGCAAATGGAATACTTTAATATTGTGGGTCTACTATGTAGGCGTATGTTTGGAGATAATGCCCTTGGAGCTATGAATATAGAGATGGTTGAAATCGCTCGAAAGGTAGGTGCTGCTTCCAAGTTCACAGGAAGTGGTGGGGCTGTGGTTGTGTACTGTCCGGATGGAACTTCACAAGTGAAGCAGCTGGAGGACGCATGCCACAAAGCTGGTTTCACTTTTCAACCAATTAAAGTTATGCCTTCGTTTCTAAACGAAACTGATCTTCAAACTCTGAAATCAAAGTGAAAATGATGATCTGCTTTCAAATATGTCGAGAGTCCTCTTTATTCTTTATTTCTTTCACCTTTCATTGGCATATGCTAAGCGCTTTTCACCAAGTATGTAGCGACCATTGAAAGAAATGCTAGTATAGATAGTTTTAGTTACAATTGTTTTGCTGCTATTGTAATGCATTTCGAGAAGCGCTTACTTTACAGTTTTAGCGTAAACCGTCATTAGATTCACATATTTTAACTCCAATTGTGTGATGCCAATTATAATTACTACTAAATCTGTTACTTCT</genome_strand>
        <mrna_strand>CAGTAGCTAACGATTAGATCTATAGATTCCAATTTCTGCAGTAACACCTACAATAAGCAACAATGGCGGCAGTGATCGAGCACAAGTCTTACGCTAGAGTTGGACTGCTTGGAAACCCTAGCGATGTTTATTTTGGGAACACTATATCCTTCAGCCTCGGGAATTTTTGGGCTTCTGTTCGTTTGGAACCTTCTATAGATCTCGTCATTGTTCCTCATCCTTCTCACGATCTCGTCCAATTCAATTCAATTTCTCACCTG..........................................................................................................................................................................................................................................................................GTGAACAGGTTGCAGAATGAGGGGTACTATGGAGGGGTTCGTTTACTTATGGCAATCGTTAAAATATTTCACAACTATTGCAAAGAGAGCAACATCACCTTACATGATGGGAATTTCACTCTCTCGTATGACACTAACATTCCCCGCCAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGGGCTTTCAGGTTCTAGTGCAATCGTAAGTGCTGCACTGAGTTGCCTTCTTGATTTTTACAAAGTCAGACATCTCATCAAAGTTGAGGTAAGGCCGAACCTTGTCCTTAATGCAGAGAAGGAACTTGGAATTGTTGCAGGTCTTCAAGATAGAGTGGCCCAGGTGTATGGAGGCGTTGTATATATG..............................................................................................GACTTTGACAAGAATCACATGGATGAATTAGGTCATGGCATATATACACCCATGGATGTTGATCTTCTCCCACCTCTTTATCTGATCTATGCAGAAAATCCCAGTGATTCTGGAAAG................................................................................................................................................................................................................................................................................................................................................................................................GTACATAGTACAGTTCGACAAAGATGGTTAGATGGTGATAAATTTATAAGATCAACCATTGAAGAGGTTGCAAATATAGCTGTGGAGGGACGGAAAGCTCTTCTTGAGAAGGACTACAATAAGTTAGCAGCCCTCATGAATCACAATTTTGACTTGAGAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGTATGTTTGGAGATAATGCCCTTGGAGCTATGAATATAGAGATGGTTGAAATCGCTCGAAAGGTAGGTGCTGCTTCCAAGTTCACAGGAAGTGGTGGGGCTGTGGTTGTGTACTGTCCGGATGGAACTTCACAAGTGAAGCAGCTGGAGGACGCATGCCACAAAGCTGGTTTCACTTTTCAACCAATTAAAGTTATGCCTTCGTTTCTAAACGAAACTGATCTTCAAACTCTGAAATCAAAGTGAAAATGATGATCTGCTTTCAAATATGTCGAGAGTCCTCTTTATTCTTTATTTCTTTCACCTTTCATTGGCATATGCTAAGCGCTTTTCACCAAGTATGTAGCGACCATTGAAAGAAATGCTAGTATAGATAGTTTTAGTTACAATTGTTTTGCTGCTATTGTAATGCATTTCGAGAAGCGCTTACTTTACAGTTTTAGCGTAAACCGTCATTAGATTCACATATTTTAACTCCAATTGTGTGATGCCAATTATAATTACTACTAAATCTGTTACTTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0034H10-9CaQU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U582212" ref_strand="+" ref_description="SGN-U582212 Tomato 200607#2 [2 ESTs aligned] (*GB) gi|195628732|gb|ACG36196.1| (e_value=1e-64) ATP; (*ATH) AT3G01640.1 (e_value=1e-30) | Symbol: None | GHMP kinase family protein, contains GHMP kinases putative ATP-binding protein domain, Pfam:PF00288 | chr3:239388-241450 FORWARD | Aliases: F4P13.18, F4P13_18; ">
      <seq>ggaccgctgtagattccaatatctgccgtaacagtagctaacgattagatctatagattccaatttctgcagtaacacctacaataagcaacaatggcggcagtgatcgagcacaagtcttacgctagagttggactgcttggaaaccctagcgatgtttattttggaaacactatatccttcagcctcgggaatttttgggcttctgttcgtttggaaccttctatagatctcgtcattgttcctcatccttctcacgatctcgtccaattcaattcaatttctcacctgttctatgtggattctcttgcaggttgattgaatttgacttaacacttggctgtaggtgaacaggttgcagaatgaggggtactatggaggggttcgtttacttatggcaatcgttaaaatatttcacaactattgcaaagagagcaacatcaccttacatgatgggaatttcactctctcgtatgacactaacattcccccgccagacagggctttcaggttctagtgcaatcgtaagtgctgcactgagttgccttcttgatttttacaaagtcagacatctcatcaaagttgaggtaaggccgaaccttgtccttaatgcagagaaggaacttggaattgttgcaggtcttcaagatagagtggcccaggtgtatgggagcgttgtatatatggactttgancagaatcacatggatgaatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0034H10-9CaQU/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0034H10.2" temp_strand="-" temp_description="C02SLe0034H10.2  AC215453.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0034H10 sequenced_by:kribb upload_account_name:korea">
        <position start="75019" stop="72918"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="74720" g_stop="74430" g_length="291"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="291" r_length="291" r_score="0.993"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="74429" i_stop="74219" i_length="211">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="74218" g_stop="74014" g_length="205"/>
          <reference_exon_boundary r_type="cDNA" r_start="292" r_stop="497" r_length="206" r_score="0.990"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="74013" i_stop="73530" i_length="484">
            <donor d_prob="0.976" d_score="0.96"/>
            <acceptor a_prob="0.871" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="73529" g_stop="73341" g_length="189"/>
          <reference_exon_boundary r_type="cDNA" r_start="498" r_stop="686" r_length="189" r_score="0.989"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="73340" i_stop="73247" i_length="94">
            <donor d_prob="0.668" d_score="0.96"/>
            <acceptor a_prob="1.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="73246" g_stop="73218" g_length="29"/>
          <reference_exon_boundary r_type="cDNA" r_start="687" r_stop="715" r_length="29" r_score="0.931"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0034H10.2" gen_strand="-" ref_id="SGN-U582212" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>714</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0034H10.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U582212" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="74720" e_stop="74430"/>
          <exon e_start="74218" e_stop="74014"/>
          <exon e_start="73529" e_stop="73341"/>
          <exon e_start="73246" e_stop="73218"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGACCGCTGTAGATTCCAATATCTGCCGTAACAGTAGCTAACGATTAGATCTATAGATTCCAATTTCTGCAGTAACACCTACAATAAGCAACAATGGCGGCAGTGATCGAGCACAAGTCTTACGCTAGAGTTGGACTGCTTGGAAACCCTAGCGATGTTTATTTTGGGAACACTATATCCTTCAGCCTCGGGAATTTTTGGGCTTCTGTTCGTTTGGAACCTTCTATAGATCTCGTCATTGTTCCTCATCCTTCTCACGATCTCGTCCAATTCAATTCAATTTCTCACCTGGTATTCTATCTTATACTTCTCCTTTATTCATCTGTTTTACTTATACTGTTTTCGGTTATCAGGATATATTAGAATTATTGACATGCCAATGCGTTTATACTTTGGGATGCGTTTATCAGGATATATAATTGATGTTTAATTAATCATTGATTAGCCAATTCTGATTGGTATTTTCATAATCAAGATCAGAAATTTAACACTTTTTTTTTAGTTCTATGTGGATTCTCTTGCAGGTTGATTGAATTTGACTTAACACTTGGCTGTAGGTGAACAGGTTGCAGAATGAGGGGTACTATGGAGGGGTTCGTTTACTTATGGCAATCGTTAAAATATTTCACAACTATTGCAAAGAGAGCAACATCACCTTACATGATGGGAATTTCACTCTCTCGTATGACACTAACATT-CCCCGCCAGGTAGAACCTAACATTGCAAGATTTATCTGCCCTTCGATAGATAAGTTATGTGGATTGGAATCACGTTAGCTAATTGTTGTTAAACTCTTACTAAACGTTCTTTGACTTGAAACTGCTCAAATATAGAGTGAGCTTCTGTTTATATGGTCCTATTGTTTGGTTTTGGAAATGTCTTTTCGTAGGTTTACAATTTATCTAAAATGTCTTAGTCGAGTAAAATAATTCTTTAATTTCAACCAGGCACAATCAAAACCTACATCTCGGACGTTGAAACTTTACATACTACCTTCTGGATTTTAGCTATGCAAATAAATTAGGAGTGAAATACATGCTTGTTTCAATCATAACTGACATTACATCACACTACTTCATGATCATGATCTGAATATGGCATTGCTATATGATGAATAAGATAAATAAAAGATTTGATTTATCTCATGTTGAAAAAGTTTGATTAACATATCAAATACTTTCCACATCTCAGACAGGGCTTTCAGGTTCTAGTGCAATCGTAAGTGCTGCACTGAGTTGCCTTCTTGATTTTTACAAAGTCAGACATCTCATCAAAGTTGAGGTAAGGCCGAACCTTGTCCTTAATGCAGAGAAGGAACTTGGAATTGTTGCAGGTCTTCAAGATAGAGTGGCCCAGGTGTATGGAGGCGTTGTATATATGGTGTGTATGTGTGATACTCTTTTTTATCTTTGACAAGTAGCTTGTAGTTGTAAAGTAAATATTGCATGTTCATCTTTAAACCTTTATTTTGCAGGACTTTGACAAGAATCACATGGATGAATT</genome_strand>
        <mrna_strand>GGACCGCTGTAGATTCCAATATCTGCCGTAACAGTAGCTAACGATTAGATCTATAGATTCCAATTTCTGCAGTAACACCTACAATAAGCAACAATGGCGGCAGTGATCGAGCACAAGTCTTACGCTAGAGTTGGACTGCTTGGAAACCCTAGCGATGTTTATTTTGGAAACACTATATCCTTCAGCCTCGGGAATTTTTGGGCTTCTGTTCGTTTGGAACCTTCTATAGATCTCGTCATTGTTCCTCATCCTTCTCACGATCTCGTCCAATTCAATTCAATTTCTCACCTG...................................................................................................................................................................................................................TTCTATGTGGATTCTCTTGCAGGTTGATTGAATTTGACTTAACACTTGGCTGTAGGTGAACAGGTTGCAGAATGAGGGGTACTATGGAGGGGTTCGTTTACTTATGGCAATCGTTAAAATATTTCACAACTATTGCAAAGAGAGCAACATCACCTTACATGATGGGAATTTCACTCTCTCGTATGACACTAACATTCCCCCGCCAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGGGCTTTCAGGTTCTAGTGCAATCGTAAGTGCTGCACTGAGTTGCCTTCTTGATTTTTACAAAGTCAGACATCTCATCAAAGTTGAGGTAAGGCCGAACCTTGTCCTTAATGCAGAGAAGGAACTTGGAATTGTTGCAGGTCTTCAAGATAGAGTGGCCCAGGTGTATGGGAGCGTTGTATATATG..............................................................................................GACTTTGANCAGAATCACATGGATGAATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0034H10-9CaQU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U584150" ref_strand="+" ref_description="SGN-U584150 Tomato 200607#2 [11 ESTs aligned] (*GB) gi|157345386|emb|CAO14684.1| (e_value=0) unnamed; (*ATH) AT3G27540.1 (e_value=2e-180)  Symbol: None | glycosyl transferase family 17 protein, low similarity to beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase (EC 2.4.1.144) from Mus musculus (SP:Q10470), Rattus norvegicus (SP:Q02527), Homo sapiens (SP:Q09327) ; ... ; (*SWP) sp|Q02527|MGAT3_RAT (e_value=1e-17) Beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase OS=Rattus norvegicus GN=Mgat3; ">
      <seq>aggtgaaggagaagatacagcgtgggtggggggtggggggtggggttgcatcgtgtgtgtctctatatatagtttatctgtagaaagagtgttgaattagaagaaaaagaagaagaacacaacaaacggctacaatttagcgtgtttttatatagtcaaattcaatccactaagaaaaaaaaattgtaaaataacttcccctctcattgataatggcaattccattgctgtaaatttgagagggaagggggtttcttttttcttcagacaatctctcttttcataattcgtttattttctgaattttacagaaggtaacaaaaaatcttgaaaaagagaggaaaaaaattggaagaagccaaagtttcattggccatttttagagaaggggtttgaagaaattatcttggtagtgctcatggtgcctgatatttattacccttcaaagaaaagcgacgatttttgtgaagacgtttgtggcgagcagtctacccctggaatagtaagcatgtcaagattaaggtgtatgcttcgaggattggatttaaaggctattgtcttcttggttgtttttgtgccattatgtatagttggtatatacttgcatggacagaagattacctacttcctccgaccaatatggcaatctcctccaaagccctttattgaacttacccattattatcatgagaatgtctccatggagaatctttgcaagcaacatggatggggaattcgtgaatatcctaggcgtgtctatgatgctgttttgtttagtaatgaagtggacatgcttactatcagatggaaggaattgtatccttacatcacacagtttgttctgctcgagtcaaactccacgtttactggattaccaaaaccatttacttttgctattaaccgggaccaatttaagtttgttgagcctcgattgacttatggaaccattggaggaagattcaggaaaggtgaaaatccgtttgttgaagaggcatatcagagagtagcactcgaccagcttttgagaatagctggaatagaggatgatgatttgctgataatgtccgatgttgatgaaattcctagcaggcacaccatcgatcttttaagatggtgtgatgacattcctccaattcttcaccttcattttaggaattacttgtactcttttgaatttgagcttaagcacagaagttggagagcttcagtccacaggtatcagagtggcaagactcgatacgtacactatcgtcagactgattaccttttggcagattcaggttggcattgtagcttttgcttccgccacatctctgacttcatattcaaaatgaaagcttacagccacactgatagagtgaggttcttgcattatttgaaccctagaagaatacaagatatcatttgtgaaggatctgatttatatgacatgcttcctgaggagtacacattcaaggatatcattggtaacatgggacctctacctcattcttactcagccgtgcatcttcctgcgcatttgctggataatcccgagaagtataagtatctcttgcctgggaactgcaaaagagaaagtggctaagttgttaccacaaagttggacgcattttcgtacataggaggtgttcatgtgcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0034H10-9CaQU/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0034H10.2" temp_strand="+" temp_description="C02SLe0034H10.2  AC215453.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0034H10 sequenced_by:kribb upload_account_name:korea">
        <position start="87858" stop="90583"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="88158" g_stop="88641" g_length="484"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="484" r_length="484" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="88642" i_stop="89128" i_length="487">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.966" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="89129" g_stop="90283" g_length="1155"/>
          <reference_exon_boundary r_type="cDNA" r_start="485" r_stop="1638" r_length="1154" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0034H10.2" gen_strand="+" ref_id="SGN-U584150" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>1639</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0034H10.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U584150" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="88158" e_stop="88641"/>
          <exon e_start="89129" e_stop="90283"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGTGAAGGAGAAGATACAGCGTGGGTGGGGGGTGGGGGGTGGGGTTGCATCGTGTGTGTCTCTATATATAGTTTATCTGTAGAAAGAGTGTTGAATTAGAAGAAAAAGAAGAAGAACACAACAAACGGCTACAATTTAGCGTGTTTTTATATAGTCAAATTCAATCCACTAAGAAAAAAAAATTGTAAAATAACTTCCCCTCTCATTGATAATGGCAATTCCATTGCTGTAAATTTGAGAGGGAAGGGGGTTTCTTTTTTCTTCAGACAATCTCTCTTTTCATAATTCGTTTATTTTCTGAATTTTACAGAAGGTAACAAAAAATCTTGAAAAAGAGAGGAAAAAAATTGGAAGAAGCCAAAGTTTCATTGGCCATTTTTAGAGAAGGGGTTTGAAGAAATTATCTTGGTAGTGCTCATGGTGCCTGATATTTATTACCCTTCAAAGAAAAGCGACGATTTTTGTGAAGACGTTTGTGGCGAGGTACCTTTTTTCCCTTTTAATTGTCATTCACCATTTTATGTGCTTAATAGTTTGGAATTTTTAGTAAATATTGGTTTTTTGTTGTTGGGTTTCTGGGGAATTATGAAATATGTTGTTGTCTTTTTTCATTCTGGTATTGCTTATAAACCCTAAAATCTTGAATTGGGATGATGTGGGGTTGCTCTGCTTCCAAAGAGGAATTTTATTTTCATAACAATATGCAATTTGGTTGTTTTTTCTTCTGGAAATTTGTGGGTGTGTTGGGGTTTTGGGAACTATTCATATGGATATTATCTAAACTGATGGAAGGTTCAGTTTTCTTATGGTTGGATGAAAAGCTTTGAAACAAAAAATTAATATGTTGTTCTCCTCTTGAAAGATATTTGGGAATTTCTAAGGGGTTCAATAAACTAATGTGTGAATATTTGATTGTTTCAAAGGTTTGCTGCTATTTGCATCTTTCTAAAATCATTTTTTTGATATGCAGCAGTCTACCCCTGGAATAGTAAGCATGTCAAGATTAAGGTGTATGCTTCGAGGATTGGATTTAAAGGCTATTGTCTTCTTGGTTGTTTTTGTGCCATTATGTATAGTTGGTATATACTTGCATGGACAGAAGATTACCTACTTCCTCCGACCAATATGGCAATCTCCTCCAAAGCCCTTTATTGAACTTACCCATTATTATCATGAGAATGTCTCCATGGAGAATCTTTGCAAGCAACATGGATGGGGAATTCGTGAATATCCTAGGCGTGTCTATGATGCTGTTTTGTTTAGTAATGAAGTGGACATGCTTACTATCAGATGGAAGGAATTGTATCCTTACATCACACAGTTTGTTCTGCTCGAGTCAAACTCCACGTTTACTGGATTACCAAAACCATTTACTTTTGCTATTAACCGGGACCAATTTAAGTTTGTTGAGCCTCGATTGACTTATGGAACCATTGGAGGAAGATTCAGGAAAGGTGAAAATCCGTTTGTTGAAGAGGCATATCAGAGAGTAGCACTCGACCAGCTTTTGAGAATAGCTGGAATAGAGGATGATGATTTGCTGATAATGTCCGATGTTGATGAAATTCCTAGCAGGCACACCATCGATCTTTTAAGATGGTGTGATGACATTCCTCCAATTCTTCACCTTCATTTTAGGAATTACTTGTACTCTTTTGAATTTGAGCTTAAGCACAGAAGTTGGAGAGCTTCAGTCCACAGGTATCAGAGTGGCAAGACTCGATACGTACACTATCGTCAGACTGATTACCTTTTGGCAGATTCAGGTTGGCATTGTAGCTTTTGCTTCCGCCACATCTCTGACTTCATATTCAAAATGAAAGCTTACAGCCACACTGATAGAGTGAGGTTCTTGCATTATTTGAACCCTAGAAGAATACAAGATATCATTTGTGAAGGATCTGATTTATATGACATGCTTCCTGAGGAGTACACATTCAAGGATATCATTGGTAACATGGGACCTCTACCTCATTCTTACTCAGCCGTGCATCTTCCTGCGCATTTGCTGGATAATCCCGAGAAGTATAAGTATCTCTTGCCTGGGAACTGCAAAAGAGAAAGTGGCTAAGTTGTTACCACAAAGTTGGACGCATTTTCGTAACATAGGAGGTGTTCATGTGCC</genome_strand>
        <mrna_strand>AGGTGAAGGAGAAGATACAGCGTGGGTGGGGGGTGGGGGGTGGGGTTGCATCGTGTGTGTCTCTATATATAGTTTATCTGTAGAAAGAGTGTTGAATTAGAAGAAAAAGAAGAAGAACACAACAAACGGCTACAATTTAGCGTGTTTTTATATAGTCAAATTCAATCCACTAAGAAAAAAAAATTGTAAAATAACTTCCCCTCTCATTGATAATGGCAATTCCATTGCTGTAAATTTGAGAGGGAAGGGGGTTTCTTTTTTCTTCAGACAATCTCTCTTTTCATAATTCGTTTATTTTCTGAATTTTACAGAAGGTAACAAAAAATCTTGAAAAAGAGAGGAAAAAAATTGGAAGAAGCCAAAGTTTCATTGGCCATTTTTAGAGAAGGGGTTTGAAGAAATTATCTTGGTAGTGCTCATGGTGCCTGATATTTATTACCCTTCAAAGAAAAGCGACGATTTTTGTGAAGACGTTTGTGGCGAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTCTACCCCTGGAATAGTAAGCATGTCAAGATTAAGGTGTATGCTTCGAGGATTGGATTTAAAGGCTATTGTCTTCTTGGTTGTTTTTGTGCCATTATGTATAGTTGGTATATACTTGCATGGACAGAAGATTACCTACTTCCTCCGACCAATATGGCAATCTCCTCCAAAGCCCTTTATTGAACTTACCCATTATTATCATGAGAATGTCTCCATGGAGAATCTTTGCAAGCAACATGGATGGGGAATTCGTGAATATCCTAGGCGTGTCTATGATGCTGTTTTGTTTAGTAATGAAGTGGACATGCTTACTATCAGATGGAAGGAATTGTATCCTTACATCACACAGTTTGTTCTGCTCGAGTCAAACTCCACGTTTACTGGATTACCAAAACCATTTACTTTTGCTATTAACCGGGACCAATTTAAGTTTGTTGAGCCTCGATTGACTTATGGAACCATTGGAGGAAGATTCAGGAAAGGTGAAAATCCGTTTGTTGAAGAGGCATATCAGAGAGTAGCACTCGACCAGCTTTTGAGAATAGCTGGAATAGAGGATGATGATTTGCTGATAATGTCCGATGTTGATGAAATTCCTAGCAGGCACACCATCGATCTTTTAAGATGGTGTGATGACATTCCTCCAATTCTTCACCTTCATTTTAGGAATTACTTGTACTCTTTTGAATTTGAGCTTAAGCACAGAAGTTGGAGAGCTTCAGTCCACAGGTATCAGAGTGGCAAGACTCGATACGTACACTATCGTCAGACTGATTACCTTTTGGCAGATTCAGGTTGGCATTGTAGCTTTTGCTTCCGCCACATCTCTGACTTCATATTCAAAATGAAAGCTTACAGCCACACTGATAGAGTGAGGTTCTTGCATTATTTGAACCCTAGAAGAATACAAGATATCATTTGTGAAGGATCTGATTTATATGACATGCTTCCTGAGGAGTACACATTCAAGGATATCATTGGTAACATGGGACCTCTACCTCATTCTTACTCAGCCGTGCATCTTCCTGCGCATTTGCTGGATAATCCCGAGAAGTATAAGTATCTCTTGCCTGGGAACTGCAAAAGAGAAAGTGGCTAAGTTGTTACCACAAAGTTGGACGCATTTTCGT-ACATAGGAGGTGTTCATGTGCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0034H10-9CaQU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U574194" ref_strand="-" ref_description="SGN-U574194 Tomato 200607#2 [4 ESTs aligned] (*GB) gi|157345389|emb|CAO14687.1| (e_value=3e-28) unnamed; ">
      <seq>gaagatgaaaaagaaggtgaatatgtggtttcaaaaatcttttaccaacagcagaagcaatctgtcaaggccaatgattgttgtgacaatgaggaagccagtgtgggagcgaatcaaactgggcctacaactcccaagacggttacacccaatccccctcgagatggagaaaccccttcctatgatgatattttagatgaatctttacccttctcacctgatcaggaagtggaagttgccaaagaaccagggcagccttctgatgctaaaattaagtgtgagatggagtactccacatgcttggctggagaatcacaagcagctgatgcaaatgatgttcataattctctgttgtgtgatgaacataatgattattcacttcttgatagttttggacccaatcttggcccttctgttgactacactcatagcacttgccatttaccagaagtgaatggtaacacaacctgtggaatttcagaattggataacttggaactggatagtcctccagacttccaacttgcagatttgccgtttggttctcaagagaatatctttagttggttggaccggctatagagatgatggcaatgagataatgctttatgcattctcggatggagaatatacttcaacaagattgtgttcttgaacagctacaggaatctttcttcaatttcagttttcgtggtttcaacaaatccttatcaaaaaatgctcattttcccaccattactacagcccccagaagaaaagaaaacagaaatattgctatatctaaaatgctggacgatatacaagttgaaggagttgttgcaagaacctactacaatataccaaggatcaacgtttgggagttggaactgttaccccttagcttattgaattggctcaaactttgatttaatgttctgatttctcttgtcaagactctcatatcccttctgttctattcagcatgttctgttttgacccccaaatacttcgggaagtttctcgtttgtgctagtttatattttacttgaagtgtggacaggattctattgctttcttatgcatctttcattgtctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0034H10-9CaQU/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0034H10.2" temp_strand="-" temp_description="C02SLe0034H10.2  AC215453.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0034H10 sequenced_by:kribb upload_account_name:korea">
        <position start="93225" stop="91289"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="92925" g_stop="92701" g_length="225"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="225" r_length="225" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="92700" i_stop="92530" i_length="171">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="92529" g_stop="92227" g_length="303"/>
          <reference_exon_boundary r_type="cDNA" r_start="226" r_stop="528" r_length="303" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="92226" i_stop="92136" i_length="91">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="92135" g_stop="91589" g_length="547"/>
          <reference_exon_boundary r_type="cDNA" r_start="529" r_stop="1075" r_length="547" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0034H10.2" gen_strand="-" ref_id="SGN-U574194" ref_strand="-">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>1075</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0034H10.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U574194" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="92925" e_stop="92701"/>
          <exon e_start="92529" e_stop="92227"/>
          <exon e_start="92135" e_stop="91589"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGATGAAAAAGAAGGTGAATATGTGGTTTCAAAAATCTTTTACCAACAGCAGAAGCAATCTGTCAAGGCCAATGATTGTTGTGACAATGAGGAAGCCAGTGTGGGAGCGAATCAAACTGGGCCTACAACTCCCAAGACGGTTACACCCAATCCCCCTCGAGATGGAGAAACCCCTTCCTATGATGATATTTTAGATGAATCTTTACCCTTCTCACCTGATCAGGTAAAAACAATTGGATGATGCAGTTGCATCTTTGGCTGTTCTGTACATTATTTCTGTTTGCAAAATTGCATGTTTTCAACTCATGAATACATATTTCTCGTAGTTCTTTCTACCTATATGCATTTTTTTAACATAATTTTTTCGTACACTGATCTTTGTTTTGTTGTTTAGGAAGTGGAAGTTGCCAAAGAACCAGGGCAGCCTTCTGATGCTAAAATTAAGTGTGAGATGGAGTACTCCACATGCTTGGCTGGAGAATCACAAGCAGCTGATGCAAATGATGTTCATAATTCTCTGTTGTGTGATGAACATAATGATTATTCACTTCTTGATAGTTTTGGACCCAATCTTGGCCCTTCTGTTGACTACACTCATAGCACTTGCCATTTACCAGAAGTGAATGGTAACACAACCTGTGGAATTTCAGAATTGGATAACTTGGAACTGGATAGTCCTCCAGACTTCCAACTTGCAGTAAGTTTCCCATCCTTGTAGATGGTAATGTGTTTTTTGTTTTATATGTATAAGAATAGCATGTGTAGCTGATGATGTTGTGTTTTACCAGGATTTGCCGTTTGGTTCTCAAGAGAATATCTTTAGTTGGTTGGACCGGCTATAGAGATGATGGCAATGAGATAATGCTTTATGCATTCTCGGATGGAGAATATACTTCAACAAGATTGTGTTCTTGAACAGCTACAGGAATCTTTCTTCAATTTCAGTTTTCGTGGTTTCAACAAATCCTTATCAAAAAATGCTCATTTTCCCACCATTACTACAGCCCACAGAAGAAAAGAAAACAGAAATATTGCTATATCTAAAATGCTGGACGATATACAAGTTGAAGGAGTTGTTGCAAGAACCTACTACAATATACCAAGGATCAACGTTTGGGAGTTGGAACTGTTACACCTTAGCTTATTGAATTGGCTCAAACTTTGATTTAATGTTCTGATTTCTCTTGTCAAGACTCTCATATCCCTTCTGTTCTATTCAGCATGTTCTGTTCTGACCCCCAAATACTTCGGGAAGTTTCTCGTTTGTGCTAGTTTATATTTTACTTGAAGTGTGGACAGGATTCTATTGCTTTCTTATGCATCTTTCATTGTCTG</genome_strand>
        <mrna_strand>GAAGATGAAAAAGAAGGTGAATATGTGGTTTCAAAAATCTTTTACCAACAGCAGAAGCAATCTGTCAAGGCCAATGATTGTTGTGACAATGAGGAAGCCAGTGTGGGAGCGAATCAAACTGGGCCTACAACTCCCAAGACGGTTACACCCAATCCCCCTCGAGATGGAGAAACCCCTTCCTATGATGATATTTTAGATGAATCTTTACCCTTCTCACCTGATCAG...........................................................................................................................................................................GAAGTGGAAGTTGCCAAAGAACCAGGGCAGCCTTCTGATGCTAAAATTAAGTGTGAGATGGAGTACTCCACATGCTTGGCTGGAGAATCACAAGCAGCTGATGCAAATGATGTTCATAATTCTCTGTTGTGTGATGAACATAATGATTATTCACTTCTTGATAGTTTTGGACCCAATCTTGGCCCTTCTGTTGACTACACTCATAGCACTTGCCATTTACCAGAAGTGAATGGTAACACAACCTGTGGAATTTCAGAATTGGATAACTTGGAACTGGATAGTCCTCCAGACTTCCAACTTGCA...........................................................................................GATTTGCCGTTTGGTTCTCAAGAGAATATCTTTAGTTGGTTGGACCGGCTATAGAGATGATGGCAATGAGATAATGCTTTATGCATTCTCGGATGGAGAATATACTTCAACAAGATTGTGTTCTTGAACAGCTACAGGAATCTTTCTTCAATTTCAGTTTTCGTGGTTTCAACAAATCCTTATCAAAAAATGCTCATTTTCCCACCATTACTACAGCCCCCAGAAGAAAAGAAAACAGAAATATTGCTATATCTAAAATGCTGGACGATATACAAGTTGAAGGAGTTGTTGCAAGAACCTACTACAATATACCAAGGATCAACGTTTGGGAGTTGGAACTGTTACCCCTTAGCTTATTGAATTGGCTCAAACTTTGATTTAATGTTCTGATTTCTCTTGTCAAGACTCTCATATCCCTTCTGTTCTATTCAGCATGTTCTGTTTTGACCCCCAAATACTTCGGGAAGTTTCTCGTTTGTGCTAGTTTATATTTTACTTGAAGTGTGGACAGGATTCTATTGCTTTCTTATGCATCTTTCATTGTCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0034H10-9CaQU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U586918" ref_strand="+" ref_description="SGN-U586918 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|157345389|emb|CAO14687.1| (e_value=4e-86) unnamed; (*ATH) AT1G25580.1 (e_value=2e-61) | Symbol: ANAC008 | no apical meristem (NAM) family protein, contains Pfam PF02365: No apical meristem (NAM) domain; similar to putative NAM protein (GP:21554371) (Arabidopsis thaliana) | chr1:8996755-8999847 REVERSE | Aliases: F2J7.1, ANAC008; ">
      <seq>aaactcagattcaccgaattttcttcaaaaatcttgaaatttttttcgatcctttatgggaaggtcttggcttattaatggcagagggcttgcaagtaaagttaaaaatgccagtgcccctgctgctcatcaaatcaaagattgtggggcaaagcggcaatgcccaaactgcaactactctattgataacaaagatgtttctcatgaatgcctggtctacctgttggtgtgaaatttgatccatctgatgctgagctcgtggagcatttagaagcaaagtgtggggtgggaaattcagaacaacacaaattcattgatgagttcatcccgacccttgaggttcacgaaggaatttgctacacccatcctgaaaatcttcctggttcaaaaaaggatggaagtagcattcacttcttttatcgcattactaatgcatatgcaactggtaaacggaagcgtagaaggattcatgatgaaaataatttgatgaaagaacatgtccgctggcacaagactggaaagaccaaggttgttatggagaatggattccaaaagggatgcaagaaggtcatggttctctatcaaactcttaagaaggggtcgaagcaggaaaagactaattgggtaatgcatcantaccacctgggccctgatgaanatgaaaaanannnngaatatgtggtttcaaaaatcttttaccaacagcanaancaatctgtca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0034H10-9CaQU/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0034H10.2" temp_strand="-" temp_description="C02SLe0034H10.2  AC215453.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0034H10 sequenced_by:kribb upload_account_name:korea">
        <position start="95181" stop="92559"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="94881" g_stop="94819" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="63" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="94818" i_stop="93986" i_length="833">
            <donor d_prob="0.909" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="93985" g_stop="93853" g_length="133"/>
          <reference_exon_boundary r_type="cDNA" r_start="64" r_stop="196" r_length="133" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="93852" i_stop="93656" i_length="197">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="93655" g_stop="93469" g_length="187"/>
          <reference_exon_boundary r_type="cDNA" r_start="197" r_stop="382" r_length="186" r_score="0.995"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="93468" i_stop="93198" i_length="271">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.958" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="93197" g_stop="92859" g_length="339"/>
          <reference_exon_boundary r_type="cDNA" r_start="383" r_stop="721" r_length="339" r_score="0.971"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0034H10.2" gen_strand="-" ref_id="SGN-U586918" ref_strand="+">
        <total_alignment_score>0.985</total_alignment_score>
        <cumulative_length_of_scored_exons>722</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0034H10.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U586918" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="94881" e_stop="94819"/>
          <exon e_start="93985" e_stop="93853"/>
          <exon e_start="93655" e_stop="93469"/>
          <exon e_start="93197" e_stop="92859"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAACTCAGATTCACCGAATTTTCTTCAAAAATCTTGAAATTTTTTTCGATCCTTTATGGGAAGGTGAGGATTAATTTTTGTGATGAAACTTCAAAGTTTTGGTGTTCTTAGGCAAAAAAAAAGATTGATCTAGGTTTGATTGGGAATGATCAAAGATGATTTAAAAATTGAATCTTTAAACAATTATTCTGGAAAAAAATTCTATCTTTTCGGTAGCTTACGTTGTAAGATTTGTGTTTGCTACTGGGGATTATGCTGAATACTAGTGTAGTTTCTTAAGGATTTTGGGTTATCTGGGTTTAGATTTATTATTCGTTTTGGGGGCCATTGTGAATGGCGTTTGAGTTATTCTTCATCCGATTATTTAACGTATTTGAAAATGCTTATAGCATGTTCTGTGTTTACAATCGAAAATGTGAAATGTGTGCTTTAATTGGGTGATTGCTGGAAGTATCCATTAGTTCTAATTGCCCAAATTTTTTGATGGTCTCATGTTCTTGATCATCTGCCCAATATTGTCTAGGTTCAAAATTTGCTTGCAATGAATCATATCAAAACCTCATGTTGAAATTTGTCTATTTACCTGTTCAATATGTCAGTGTCATAGAAAGATTTGGGAAAGTTGGTCTCAGGTCTAAACTGATAGTGAAACCAGATGGATTATTGAATTTATCAAGAGTATTTACTGAACTTATAGTTAATTGTTATGTATTCTAGACGAATTACATTGGGTATGTTGTTCTGGTTGTTGTATTGTTAATTGTCAAGTATATTTCCTTTAGGCTTCAATCGAAGTTTTTGAATCTGTTGGAAGACATTGTTGTTCTTTTGTCAATTATATATGTCACCATAAGAAGATTTATAGTTCTAATCTGTTTCTTTTTTTATTGATCCAGGTCTTGGCTTATTAATGGCAGAGGGCTTGCAAGTAAAGTTAAAAATGCCAGTGCCCCTGCTGCTCATCAAATCAAAGATTGTGGGGCAAAGCGGCAATGCCCAAACTGCAACTACTCTATTGATAACAAAGATGTAAGCTAACAAGTGTTCATGCATAAGTTACTGACCTCTTGTAGTTTTCTTAACAGCTTCCTCAAACTGTTTTGTCTAGTTGAAAATTTCTCTTGTATAGAAAGTTCTTTTTTCCCCCGGTTCAAGATTAGGCCAACCAATAGTTGTAAATTAGCTGCTCAAAGCCTGCTTCAATATTCTACTGCTTTCTTATTCAGGTTTCTCATGAATGGCCTGGTCTACCTGTTGGTGTGAAATTTGATCCATCTGATGCTGAGCTCGTGGAGCATTTAGAAGCAAAGTGTGGGGTGGGAAATTCAGAACAACACAAATTCATTGATGAGTTCATCCCGACCCTTGAGGTTCACGAAGGAATTTGCTACACCCATCCTGAAAATCTTCCTGGTTTGTAGCACACCCAGTTCTTCAATAAACTAGTTAATGTTTGCTTTAACTGCATTAATCAAGTCAATAAGCTGTACTGGTGAAATAAATAGAGGGAAGGCTATCATCAGGAAAGGCTATTGTTGTTTTCAGGGTTGCATTTATCTAGAAATGAAAATGTAGCAAAAGTTAGTTGTTGTAAGGAGCATGTTTCCGTTTTTCTGGTTGAAACCGGACAACCATCTATATGTTGTGGCAGAATTTCATTCCTCAATCTCTTATTTTGCTTCAGGTTCAAAAAAGGATGGAAGTAGCATTCACTTCTTTTATCGCATTACTAATGCATATGCAACTGGTAAACGGAAGCGTAGAAAGATTCATGATGAAAATAATTTGATGAAAGAACATGTCCGCTGGCACAAGACTGGAAAGACCAAGGTTGTTATGGAGAATGGATTCCAAAAGGGATGCAAGAAGGTCATGGTTCTCTATCAAACTCTTAAGAAGGGGTCGAAGCAGGAAAAGACTAATTGGGTAATGCATCAGTACCACCTGGGCCCTGATGAAGATGAAAAAGAAGGTGAATATGTGGTTTCAAAAATCTTTTACCAACAGCAGAAGCAATCTGTCA</genome_strand>
        <mrna_strand>AAACTCAGATTCACCGAATTTTCTTCAAAAATCTTGAAATTTTTTTCGATCCTTTATGGGAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTTGGCTTATTAATGGCAGAGGGCTTGCAAGTAAAGTTAAAAATGCCAGTGCCCCTGCTGCTCATCAAATCAAAGATTGTGGGGCAAAGCGGCAATGCCCAAACTGCAACTACTCTATTGATAACAAAGAT.....................................................................................................................................................................................................GTTTCTCATGAAT-GCCTGGTCTACCTGTTGGTGTGAAATTTGATCCATCTGATGCTGAGCTCGTGGAGCATTTAGAAGCAAAGTGTGGGGTGGGAAATTCAGAACAACACAAATTCATTGATGAGTTCATCCCGACCCTTGAGGTTCACGAAGGAATTTGCTACACCCATCCTGAAAATCTTCCTG...............................................................................................................................................................................................................................................................................GTTCAAAAAAGGATGGAAGTAGCATTCACTTCTTTTATCGCATTACTAATGCATATGCAACTGGTAAACGGAAGCGTAGAAGGATTCATGATGAAAATAATTTGATGAAAGAACATGTCCGCTGGCACAAGACTGGAAAGACCAAGGTTGTTATGGAGAATGGATTCCAAAAGGGATGCAAGAAGGTCATGGTTCTCTATCAAACTCTTAAGAAGGGGTCGAAGCAGGAAAAGACTAATTGGGTAATGCATCANTACCACCTGGGCCCTGATGAANATGAAAAANANNNNGAATATGTGGTTTCAAAAATCTTTTACCAACAGCANAANCAATCTGTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0034H10-9CaQU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U568149" ref_strand="+" ref_description="SGN-U568149 Tomato 200607#2 [15 ESTs aligned] (*GB) gi|157345390|emb|CAO14688.1| (e_value=1e-175) unnamed; (*ATH) AT5G50180.1 (e_value=4e-156) | Symbol: None | protein kinase, putative, similar to protein kinase ATN1 (Arabidopsis thaliana) gi:1054633:emb:CAA63387 | chr5:20448164-20450326 FORWARD | Aliases: K6A12.4, K6A12_4; (*SWP) sp|Q2MHE4|HT1_ARATH (e_value=2e-54) Serine/threonine-protein kinase HT1 OS=Arabidopsis thaliana GN=HT1; ">
      <seq>cggccggggctcctaattgcttaacattcatctctatctttcattatctttcctcttattctactcactcttcaccttatttatctctcttttttcttctcctcctcctgatagcctcaattgatccaccaaccaaaccagctgatctacttcttctgaactttttatttttcaattgaaccagtaggaatttctggggtttcttgtttgtggggttcatttttctcttgttttaaacacaagggcatgttgtagatttgtttctggtttgtgggtctatgagttttctggttcttggtcataaagtcttgaactttttttgctgcttcaaatgctaggtgaattgttattaagtgtttcgaatttggtagttaaatagatgtgctactagttcattcttgaagttattatagggggagagtatttggggtctggaaaatgggatctgctaatgggttttactccggagaagaagagttcaatttggaggcgaaatggttaattgatccgaagcttctgttcgttggtcctaagattggagagggtgctcatgccaaagtgtatgagggaaaatacagaaaccagaatgtagcaataaagattgtgcataaaggggagacacctgaggagattgccaagagggaatctcgttttggaagggaggttgctatgttatccagagttcagcacaagaacttagtgaagttcataggagcttgcaaggagcctgtcatggtcatagtaactgaacttcttctcggggggacgctgaagaaatacttgctgaacctgaggccaaggtgcttggatactggtgttgctattagatttgcccttgatatagcccgtgcaatggagtgcttgcactctcatggtatcattcatcgcgacctaaaacctgagaacttgcttttgactgcggaccacaaaactgtcaaacttgcggattttggtttggcaagagaagaatcattgacagaaatgatgactgctgaaactggaacctatcgctggatggctccagagctctacagcacggtcactttaagacacggcgagaagaagcattataatcacaaagtagatgcctacagttttgcaatcgttctgtgggaactcgtacataacaaattaccatttgagggcatgtctaatttgcaggctgcttatgcagctgcttttaagaatgtgagaccaagtgcagatgatctccccgaggatttggcagtaattgtaacttcgtgttggaaagaggatccaaacactcgtcccaacttcactcagataatacagatgcttcttcattttctctcttcagtttcccctccggaaccagtaataccagctaggattttcacttcagagaatcatgtattaccaccggagtctccaggtaccagctccttaatgtccaagcgtgatgactcggttgagacccctaaaacacccatggagaatcagccaagaggtttcttcttctgttttaaccaatgctactgatccccaagggaaaagtttgttaattctctagaaaatactcggagttgagctatcttattatacaatagtaagctcacaaaatgtttagcccagatatgtcactagataacttagcttttggtctttcttccacataagataaaaaggtacacttttgagttttagccatggtaattcaaaggtgaaggacgttgttgcaggaacgtgttctgactaattgtgaggagttgggttgatgtgatgtatattatagttgtaaaaataaggtccatccaaagacctgtactccaatattttaatcgttttgacgcattatatgaactcattaatgtaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0034H10-9CaQU/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0034H10.2" temp_strand="-" temp_description="C02SLe0034H10.2  AC215453.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0034H10 sequenced_by:kribb upload_account_name:korea">
        <position start="104315" stop="99620"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="104023" g_stop="103451" g_length="573"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="572" r_length="572" r_score="0.988"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="103450" i_stop="102937" i_length="514">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="102936" g_stop="102804" g_length="133"/>
          <reference_exon_boundary r_type="cDNA" r_start="573" r_stop="705" r_length="133" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="102803" i_stop="102689" i_length="115">
            <donor d_prob="0.760" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="102688" g_stop="102493" g_length="196"/>
          <reference_exon_boundary r_type="cDNA" r_start="706" r_stop="901" r_length="196" r_score="0.990"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="102492" i_stop="101438" i_length="1055">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="101437" g_stop="101313" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="902" r_stop="1026" r_length="125" r_score="0.992"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="101312" i_stop="101212" i_length="101">
            <donor d_prob="0.905" d_score="0.98"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="101211" g_stop="101053" g_length="159"/>
          <reference_exon_boundary r_type="cDNA" r_start="1027" r_stop="1185" r_length="159" r_score="0.981"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="101052" i_stop="100551" i_length="502">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="100550" g_stop="99920" g_length="631"/>
          <reference_exon_boundary r_type="cDNA" r_start="1186" r_stop="1797" r_length="612" r_score="0.965"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="1833" polyA_stop="1846"/>
      <MATCH_line gen_id="C02SLe0034H10.2" gen_strand="-" ref_id="SGN-U568149" ref_strand="+">
        <total_alignment_score>0.981</total_alignment_score>
        <cumulative_length_of_scored_exons>1817</cumulative_length_of_scored_exons>
        <coverage percentage="0.984" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0034H10.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U568149" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="104023" e_stop="103451"/>
          <exon e_start="102936" e_stop="102804"/>
          <exon e_start="102688" e_stop="102493"/>
          <exon e_start="101437" e_stop="101313"/>
          <exon e_start="101211" e_stop="101053"/>
          <exon e_start="100550" e_stop="99920"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAACTAAAGTCTCCTAATTGCTTAACATTCATCTCTATCTTTCATTATCTTTCCTCTTATTCTACTCACTCTTCACCTTATTTATCTCTCTTTTTTCTTCTCCTCCTCCTGATAGCCTCAATTGATCCACCAACCAAACCAGCTGATCTACTTCTTCTGAACTTTTTATTTTTCAATTGAACCAGTAGGAATTTCTGGGGTTTCTTGTTTGTGGGGTTCATTTTTCTCTTGTTTTAAACACAAGGGCATGTTGTAGATTTGTTTCTGGTTTGTGGGTCTATGAGTTTTCTGGTTCTTGGTCATAAAGTCTTGAACTTTTTTTGCTGCTTCAAATGCTAGGTGAATTGTTATTAAGTGTTTCGAATTTGGTAGTTAAATAGATGTGCTACTAGTTCATTCTTGAAGTTATTATAGGGGGAGAGTATTTGGGGTCTGGAAAATGGGATCTGCTAATGGGTTTTACTCCGGAGAAGAAGAGTTCAATTTGGAGGCGAAATGGTTAATTGATCCGAAGCTTCTGTTCGTTGGTCCTAAGATTGGAGAGGGTGCTCATGCCAAAGTGTATGAGGGAAAGTAAGTTTACTTTCTCTGTTAGTAAAACTATGTATTTGACTGATCTGTAAGAGCCGGACTCAGTTTGTTGGATCACACTGGGTATGTTGTTGTTGTTGTACTGATTTGTAAGTGTTGTTTGGTTATTTGAACTTCTGAACTAATACGGCTAGATTCTGTAGGTAGGGCATTACTGTTTGATTTAATTCAGCTAGTTCAATGGTTTAATCTTAGGAAAATGTTTGAAGAACTGACAGTAAATAGTCGCTAAAGTTTCCGTTAGATTTATAGTATGTGTATAAGGGTGTATAATCAGAGTATAGTCTATGTATACTGCTCAAAAAATAAACAAGTGAATTCGACTGGCTATTTGTGAAAAAATCCGAAGTGTTTTGCTAAAAAGATATTGTTCTTGATTCTGAAGTTACGGTATTTAAAAGTATGTGCTAGTTTGTTAAATTAGTAAAGCCTAAATGTGTGTCTTGATGCAGCTTTGTGCTTCTTTAGTTATACTTTTTGGTTGGGTTCTTGTCAGATACAGAAACCAGAATGTAGCAATAAAGATTGTGCATAAAGGGGAGACACCTGAGGAGATTGCCAAGAGGGAATCTCGTTTTGGAAGGGAGGTTGCTATGTTATCCAGAGTTCAGCACAAGAACTTAGTGAAGGTTGTTTTTAAGTCCCAAACTTGTGTTTGGGTATGATCTATTTGATGAGTTGTTAAGACGGCTAAATGAATTGCTCACATTGGTTATTGGTTTTCATTTTATTTTTCATTTACAGTTCATAGGAGCTTGCAAGGAGCCTGTCATGGTCATAGTAACTGAACTTCTTCTCGGGGGGACGCTGAGGAAATACTTGCTGAACCTGAGGCCAAGGTGCTTGGATACTGGTGTCGCTATTAGATTTGCCCTTGATATAGCCCGTGCAATGGAGTGCTTGCACTCTCATGGTATCATTCATCGCGACCTAAAACCTGGTACTAATACGTCTCTTTCACTGGTTTTTTTTTATGTTACATATTTTTAAATTCAGACATTTCAACATCCATTTGATCTGGTCTGAAATCACCACTGATCTCTTAACCTTTATATGGTCTTGATCTCTAGTAAATGTGTTTCAATGGTCACATGCTTCAATATGGTACTAGAGCAGGCAAAGGTCCTGGGATGGAATCTCACCGTCGCCTTTTATTGAATAGAATTTTCACGTGCTCGCCCCATGAAAAAAGAATCAAGCTCGCACGTGAAGGGACGTGTTTAAAATATAATTGAAAAAATAAGTGTGTTCTCTCTATAACAACTTAAGCTTATAAATGAGACGGTCACACATCTCAATAGCCCCTGTATGGTAAAAACATTACTGGTTAAGTAATTTCATCTGGCATATGGTTCCAGATCACTGTTCCTATTATTGTCTGTGGGTTAGTAGAACAGATAAGTTAATAATTGATAGTACTCTAGAGATGCTCTCATTAGTGAAATCACATGGAACTAGATTCTTGACAATATTACCAGTACATGGTTGGTAGGAGCAGGTGAATACATAAGAAACTTTAACTGGAATAAATTCCCCTGAAAGTGCTGCAGAGTAGATGCTTACTCATCATCCTTTTTAATAAAGTGGTCGAGAAAATTGATTTTTTTTTCTTTTGTTTTCTTCTTTCAAGGTTAGAAAATTTTGAGCTCCTAAATAAAATGATAAGATCATTTTAGTTTCTACTACAAAATTGAGATGCATAACGATTTTTAGGTATTTTAATTTCTTTTTCTTGGATGAAGTTATGAGTTATATACAAAGGCATCAAGAAGATGCAAAATTACAGTTAATGTCAGCAATTATGATTGTTGTCTGCTTTGGCCTGGTAGTGTAACTTATACTTGTCAAGGTTTAGCAATGATTTCAAACTTTACAAGTCTTCTCTGCTAATCGAATGGTGTTGACAACATTTATGGATATTGTTATTCCTTTAAAAGTTACAAGGCTGTTAGTATCATTTTTTCTGATTTGGGTTCTGTTTGCATTTACTTCCAGAGAACTTGCTTTTGACTGCGGACCACAAAACTGTCAAACTTGCGGATTTTGGTTTGGCAAGAGAAGAATCATTGACAGAGATGATGACTGCTGAAACTGGAACCTATCGCTGGATGGCTCCAGAGGTTGATTCTTGAATTCCCGTGCTTATTAATATATTCTCCGTTCCCTTTCTCTTCTCCTATGGCTATATAGTGCTGACTTATCACTCTCCTTTTTGTGGCAGCTCTACAGCACGGTCACTTTAAGACACGGCGAGAAGAAGCATTATAATCATAAAGTAGATGCCTACAGTTTTGCGATCGTTCTGTGGGAACTCGTACATAACAAATTACCATTTGAGGGCATGTCTAATTTACAGGCTGCTTATGCAGCTGCTTTTAAGGTAAATATCTTCTCTCCATTGGTCTTTGTCATCTAGTTATTTCAATATCATAATTTTAATTTTCCTAAACTAAAAGGATGAGAGAGGTTAAGATGTGATAGCAATTAGTTGGTTCACATCACACTGCCTCCTTTACAAAGGGCACATCAAAGACTAAATTGGACCACTGGGACACTAGTACAACTTTGGCTGAATGCCCTTTAATTTACCAACGTTTTTTACACAGCTGAAAATAGTTGTTTTTGTCTCAAATCACCTAACTTTTGACTGAAGAACACAAATACGTGGATAATTACAATGCAGAAACTTGAGACCCAGGGATTTGGTCTAGCGGTAAGAGCGTGTGTAGCACATGATGTGGGGACGAAAGCCTATATTTAAGTGGAAAATGGTACGAGAAATAAAATAAAAAAGGAACTTGGGGTCCAGAAAGAAGTTTAGTATAACAATTAATATCTGTTTAGTTTCGCTAAACCAAGTTTATACCTTGTGTGTTTTTCAGAATGTGAGACCAAGTGCAGATGATCTCCCCGAGGATTTGGCAGTAATTGTAACTTCGTGTTGGAAAGAGGATCCAAACACTCGTCCCAACTTCACTCAGATAATACAGATGCTTCTTCATTTTCTCTCTTCAGTTTCCCCTCCGGAACCAGTAATACCAGCTAGGATTTTCACTTCAGAGAATCATGTATTACCACCGGAGTCTCCAGGTACCAGCTCGTTAATGTCCAAGCGTGATGACTCGGTTGAGACCCCTAAAACACCCATGGAGAATCAGCCAAGAGGTTTCTTCTTCTGTTTTAACCAATGCTACTGATCCCCAAGGGAAAAGTTTGTTAATTCTCTAGAAAATACTCGGAGTTGAGCTATCTTATTATACAATAGTAAGCTCACAAAATGTTTAGCCCAGATATGTCACTAGATAACTTAGCTTTTGGTCTTTCTTCCACATAAGATAAAAAGGTACACTTTTGAGTTTTAGCCATGGTAATTCAAAGGTGAAGGACGTTGTTGCAGGAAGATGCATGATCTAGACTCGCGTTCTGACTTAATTGTGAGGAGTTGGGTTGCTGTGATGTATATTATAGTTGTAAAAAATAAGGTCCATCCAAAGACCTGTACTCCTATATTTT</genome_strand>
        <mrna_strand>CGGC-CGGGGCTCCTAATTGCTTAACATTCATCTCTATCTTTCATTATCTTTCCTCTTATTCTACTCACTCTTCACCTTATTTATCTCTCTTTTTTCTTCTCCTCCTCCTGATAGCCTCAATTGATCCACCAACCAAACCAGCTGATCTACTTCTTCTGAACTTTTTATTTTTCAATTGAACCAGTAGGAATTTCTGGGGTTTCTTGTTTGTGGGGTTCATTTTTCTCTTGTTTTAAACACAAGGGCATGTTGTAGATTTGTTTCTGGTTTGTGGGTCTATGAGTTTTCTGGTTCTTGGTCATAAAGTCTTGAACTTTTTTTGCTGCTTCAAATGCTAGGTGAATTGTTATTAAGTGTTTCGAATTTGGTAGTTAAATAGATGTGCTACTAGTTCATTCTTGAAGTTATTATAGGGGGAGAGTATTTGGGGTCTGGAAAATGGGATCTGCTAATGGGTTTTACTCCGGAGAAGAAGAGTTCAATTTGGAGGCGAAATGGTTAATTGATCCGAAGCTTCTGTTCGTTGGTCCTAAGATTGGAGAGGGTGCTCATGCCAAAGTGTATGAGGGAAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACAGAAACCAGAATGTAGCAATAAAGATTGTGCATAAAGGGGAGACACCTGAGGAGATTGCCAAGAGGGAATCTCGTTTTGGAAGGGAGGTTGCTATGTTATCCAGAGTTCAGCACAAGAACTTAGTGAAG...................................................................................................................TTCATAGGAGCTTGCAAGGAGCCTGTCATGGTCATAGTAACTGAACTTCTTCTCGGGGGGACGCTGAAGAAATACTTGCTGAACCTGAGGCCAAGGTGCTTGGATACTGGTGTTGCTATTAGATTTGCCCTTGATATAGCCCGTGCAATGGAGTGCTTGCACTCTCATGGTATCATTCATCGCGACCTAAAACCTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAACTTGCTTTTGACTGCGGACCACAAAACTGTCAAACTTGCGGATTTTGGTTTGGCAAGAGAAGAATCATTGACAGAAATGATGACTGCTGAAACTGGAACCTATCGCTGGATGGCTCCAGAG.....................................................................................................CTCTACAGCACGGTCACTTTAAGACACGGCGAGAAGAAGCATTATAATCACAAAGTAGATGCCTACAGTTTTGCAATCGTTCTGTGGGAACTCGTACATAACAAATTACCATTTGAGGGCATGTCTAATTTGCAGGCTGCTTATGCAGCTGCTTTTAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGTGAGACCAAGTGCAGATGATCTCCCCGAGGATTTGGCAGTAATTGTAACTTCGTGTTGGAAAGAGGATCCAAACACTCGTCCCAACTTCACTCAGATAATACAGATGCTTCTTCATTTTCTCTCTTCAGTTTCCCCTCCGGAACCAGTAATACCAGCTAGGATTTTCACTTCAGAGAATCATGTATTACCACCGGAGTCTCCAGGTACCAGCTCCTTAATGTCCAAGCGTGATGACTCGGTTGAGACCCCTAAAACACCCATGGAGAATCAGCCAAGAGGTTTCTTCTTCTGTTTTAACCAATGCTACTGATCCCCAAGGGAAAAGTTTGTTAATTCTCTAGAAAATACTCGGAGTTGAGCTATCTTATTATACAATAGTAAGCTCACAAAATGTTTAGCCCAGATATGTCACTAGATAACTTAGCTTTTGGTCTTTCTTCCACATAAGATAAAAAGGTACACTTTTGAGTTTTAGCCATGGTAATTCAAAGGTGAAGGACGTTGTTGC----AG--G-A--A-C--G--T---GTTCTGAC-TAATTGTGAGGAGTTGGGTTGATGTGATGTATATTATAGTTGT-AAAAATAAGGTCCATCCAAAGACCTGTACTCCAATATTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0034H10-9CaQU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U599584" ref_strand="+" ref_description="SGN-U599584 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>ggctccgtcgattttgccgccgggatgtattcaaccgcccgccgtactaccctagttgactataatcaacgtcattcgccgtcgacgatctccaaatcgtcgttgcaactaattcacttgcgtagaattgtttctatttctcttttcgctaaaaataatcaccttcccaatagatgccggcgaatgcgtaccatatccggcagacatttatcttctcattcatcggattcttcaagcgactatgaaaacccgttaagttgtgattcaactcacattgactctgtactgcggccaggtaatctgctgtccaaaagtgttacatggattggtgttgccactattactagcaaagttctggtgattatttcctaatatgtttttaaatgggttattgagggaaattgttatagcttcagcttttggcattggtcctgtagtaactgccttcaggtatgcttcggtgctgcctggttttgctgcatcagttcttggtggtgttaatggccctattcacatcacaatgacaactacattaaggctagttgctatctctgtatgctactatcttgaatcctaaagatgaattcagagtgttctgcactttaactgctacagaattattttttaccaggagccaaaggcaccatattcctgttgtcgccatattcatctaaagaagcttgcnatacttgaatttatgtgtctctacatgtgataacccagnattctttgngcacagtaccatnanatgacaaatta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0034H10-9CaQU/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0034H10.2" temp_strand="+" temp_description="C02SLe0034H10.2  AC215453.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0034H10 sequenced_by:kribb upload_account_name:korea">
        <position start="107971" stop="109964"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108271" g_stop="108565" g_length="295"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="295" r_length="295" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108566" i_stop="108640" i_length="75">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.967" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108641" g_stop="108730" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="296" r_stop="385" r_length="90" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108731" i_stop="108806" i_length="76">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="108807" g_stop="108871" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="386" r_stop="450" r_length="65" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="108872" i_stop="109041" i_length="170">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="109042" g_stop="109085" g_length="44"/>
          <reference_exon_boundary r_type="cDNA" r_start="451" r_stop="494" r_length="44" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="109086" i_stop="109400" i_length="315">
            <donor d_prob="0.899" d_score="1.00"/>
            <acceptor a_prob="0.839" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="109401" g_stop="109664" g_length="264"/>
          <reference_exon_boundary r_type="cDNA" r_start="495" r_stop="759" r_length="265" r_score="0.973"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0034H10.2" gen_strand="+" ref_id="SGN-U599584" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>758</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0034H10.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U599584" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108271" e_stop="108565"/>
          <exon e_start="108641" e_stop="108730"/>
          <exon e_start="108807" e_stop="108871"/>
          <exon e_start="109042" e_stop="109085"/>
          <exon e_start="109401" e_stop="109664"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGCTCCGTCGATTTTGCCGCCGGGATGTATTCAACCGCCCGCCGTACTACCCTAGTTGACTATAATCAACGTCATTCGCCGTCGACGATCTCCAAATCGTCGTTGCAACTAATTCACTTGCGTAGAATTGTTTCTATTTCTCTTTTCGCTAAAAATAATCACCTTCCCAATAGATGCCGGCGAATGCGTACCATATCCGGCAGACATTTATCTTCTCATTCATCGGATTCTTCAAGCGACTATGAAAACCCGTTAAGTTGTGATTCAACTCACATTGACTCTGTACTGCGGCCAGGTCCGTCATTTACAAACAATATCCATCTTTATACATTTGTATGTTAATCATTTATTCTTAGTTTGTCTCATGTAGGTAATCTGCTGTCCAAAAGTGTTACATGGATTGGTGTTGCCACTATTACTAGCAAAGTTCTGGTGATTATTTCCTAATATGTTTTTAAATGTACTTACTGTTAAACCTTTAAATTCTTCTCTCAATATTTTTGTTGTTTTCGGTAAACCAATTTTTGGTTATTTAGGGGTTATTGAGGGAAATTGTTATAGCTTCAGCTTTTGGCATTGGTCCTGTAGTAACTGCCTTCAGGTATGCCGTTTACCTGACTTGGAAATTTTTTCACCTTCCCCATTCTTTTCTAAGAGAACAAGAGAGTGTTCTATGTTTCCTAAAAAGTTTCTTACTTGTCAAACTTCAAGATATTTAGTTGTTACTCTCCTCACCATTTTAGTCTTAATCGAGTGGTGCTGTAATTACAGGTATGCTTCGGTGCTGCCTGGTTTTGCTGCATCAGTTCTTGGTGGTGAGTAGAGGATAAAATAAAGTAGATGGTTTATCTGTCCATAAGAGTATTGAGATACAAAACATAATAGCATTGTCTTTAGAGTTGGGTTCACTTTGTTTGTGTATGCATGATTATTTTTTTTTCTCTTTAGTCAAAACATGGGTGTAAGTAACAGCCATCTTTTTCTATAAGCAGTGTGTTGTTACCAGCTGCAGACAATATATTTCTAAGGAAATAGGCAACTCATATATAAGAAGTTTGTTAGTTCACAAAATGTTTTATGTGTGGGAGATGATAAGAACATTTTGATCACTGTCTCCTTACTTCACGCAGGTGTTAATGGCCCTATTCACATCACAATGACAACTACATTAAGGCTAGTTGCTATCTCTGTATGCTACTATCTTGAATCCTAAAGATGAATTCAGAGTGTTCTGCACTTTAACTGCTACAGAATTA-TTTTTACCAGGAGCCAAAGGCACCATATTCCTGTTGTCGCCATATTCATCTAAAGAAGCTTGCGATACTTGAATTTATGTGTCTCTACATGTGATAACCCAGGATTCTTTGTGCACAGTACCATAACATGACAAATTA</genome_strand>
        <mrna_strand>GGCTCCGTCGATTTTGCCGCCGGGATGTATTCAACCGCCCGCCGTACTACCCTAGTTGACTATAATCAACGTCATTCGCCGTCGACGATCTCCAAATCGTCGTTGCAACTAATTCACTTGCGTAGAATTGTTTCTATTTCTCTTTTCGCTAAAAATAATCACCTTCCCAATAGATGCCGGCGAATGCGTACCATATCCGGCAGACATTTATCTTCTCATTCATCGGATTCTTCAAGCGACTATGAAAACCCGTTAAGTTGTGATTCAACTCACATTGACTCTGTACTGCGGCCAG...........................................................................GTAATCTGCTGTCCAAAAGTGTTACATGGATTGGTGTTGCCACTATTACTAGCAAAGTTCTGGTGATTATTTCCTAATATGTTTTTAAAT............................................................................GGGTTATTGAGGGAAATTGTTATAGCTTCAGCTTTTGGCATTGGTCCTGTAGTAACTGCCTTCAG..........................................................................................................................................................................GTATGCTTCGGTGCTGCCTGGTTTTGCTGCATCAGTTCTTGGTG...........................................................................................................................................................................................................................................................................................................................GTGTTAATGGCCCTATTCACATCACAATGACAACTACATTAAGGCTAGTTGCTATCTCTGTATGCTACTATCTTGAATCCTAAAGATGAATTCAGAGTGTTCTGCACTTTAACTGCTACAGAATTATTTTTTACCAGGAGCCAAAGGCACCATATTCCTGTTGTCGCCATATTCATCTAAAGAAGCTTGCNATACTTGAATTTATGTGTCTCTACATGTGATAACCCAGNATTCTTTGNGCACAGTACCATNANATGACAAATTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>28</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="-" PGL_start="5769" PGL_stop="4923"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="5769" e_stop="4923"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="5769" e_stop="4923" e_length="847"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="5769" stop="5282"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U588439" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="5737" stop="5110"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U566462" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="5574" stop="4923"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U588438" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TGCAATTCTCTGTTATTCTTTCTTTCTTTCTCTTTTTGATGGTTCTTGAATTGTTGCACTAAATGGCTTCAATTCTTCGGAAAGCTCTGAGGAACCAATTTCAATCTTCCACAACAAGAATCATCACTAACCTTAATAAATCCGAACCGGCAATCCTCAGTTCTACCTCTCCTCAACCACCAATCTTGGCTCATCCTTCTTGTAGCAGACGAAATCAAATACCCTTTTGTCTCCAACGCGAAACAGAGGATCCAAATCAGAAGGTTTCCCCTTGCCCACTGGTTTATCCAAGTTTCCCTTTCGGTGTTTTCCTAAACCCCATTTCTCAAATTGGGGTAGTTAAATCTGAGAATGATGGAGGCGTCGTCGTAGGAGAAGATTCACTTAAGATATGGGCGGATAGTGTGAAGAAAAAGAGGAAGAGGAAGATGAACAAGCACAAGTTGAAGAAGCTGAGGAAGCGCTTGAGGAGGAAGACAAAGGCATAGGTGAAATTTGATGTCCCTTTCCGGCATAATGTTAATTGTTTCTGACTGAAAGATAGTCCTTTTTCCCATGTCCTCGCCATTTTGAGTTGAAAATATTGCTCAATTTCGATTGCTAAATCATGTTTTAGGAATAATGAACCTTTTTCCTCCCGAGTAGAGATGTATGTTTGGGATTTATTGGTCAGGCTTTGTGTAACTGTTGCAGTCTAACATAGATAAGCCATCATCTTAGAAGCTTTTAGAGCAATTCTGAAGAACTTTTGAGAAATTCTTCCACATCTATAGATAGTTGTTGCTGTTATTTACAATTATCTGAACTCTGAAGAACACGGATCGATAGCTTCTTGTTGTTATTATCT</gDNA_template>
            <first_frame> C  N  S  L  L  F  F  L  S  F  S  F  *  W  F  L  N  C  C  T  K  W  L  Q  F  F  G  K  L  *  G  T  N  F  N  L  P  Q  Q  E  S  S  L  T  L  I  N  P  N  R  Q  S  S  V  L  P  L  L  N  H  Q  S  W  L  I  L  L  V  A  D  E  I  K  Y  P  F  V  S  N  A  K  Q  R  I  Q  I  R  R  F  P  L  A  H  W  F  I  Q  V  S  L  S  V  F  S  *  T  P  F  L  K  L  G  *  L  N  L  R  M  M  E  A  S  S  *  E  K  I  H  L  R  Y  G  R  I  V  *  R  K  R  G  R  G  R  *  T  S  T  S  *  R  S  *  G  S  A  *  G  G  R  Q  R  H  R  *  N  L  M  S  L  S  G  I  M  L  I  V  S  D  *  K  I  V  L  F  P  M  S  S  P  F  *  V  E  N  I  A  Q  F  R  L  L  N  H  V  L  G  I  M  N  L  F  P  P  E  *  R  C  M  F  G  I  Y  W  S  G  F  V  *  L  L  Q  S  N  I  D  K  P  S  S  *  K  L  L  E  Q  F  *  R  T  F  E  K  F  F  H  I  Y  R  *  L  L  L  L  F  T  I  I  *  T  L  K  N  T  D  R  *  L  L  V  V  I  I  </first_frame>
            <second_frame>  A  I  L  C  Y  S  F  F  L  S  L  F  D  G  S  *  I  V  A  L  N  G  F  N  S  S  E  S  S  E  E  P  I  S  I  F  H  N  K  N  H  H  *  P  *  *  I  R  T  G  N  P  Q  F  Y  L  S  S  T  T  N  L  G  S  S  F  L  *  Q  T  K  S  N  T  L  L  S  P  T  R  N  R  G  S  K  S  E  G  F  P  L  P  T  G  L  S  K  F  P  F  R  C  F  P  K  P  H  F  S  N  W  G  S  *  I  *  E  *  W  R  R  R  R  R  R  R  F  T  *  D  M  G  G  *  C  E  E  K  E  E  E  E  D  E  Q  A  Q  V  E  E  A  E  E  A  L  E  E  E  D  K  G  I  G  E  I  *  C  P  F  P  A  *  C  *  L  F  L  T  E  R  *  S  F  F  P  C  P  R  H  F  E  L  K  I  L  L  N  F  D  C  *  I  M  F  *  E  *  *  T  F  F  L  P  S  R  D  V  C  L  G  F  I  G  Q  A  L  C  N  C  C  S  L  T  *  I  S  H  H  L  R  S  F  *  S  N  S  E  E  L  L  R  N  S  S  T  S  I  D  S  C  C  C  Y  L  Q  L  S  E  L  *  R  T  R  I  D  S  F  L  L  L  L  S </second_frame>
            <third_frame>   Q  F  S  V  I  L  S  F  F  L  F  L  M  V  L  E  L  L  H  *  M  A  S  I  L  R  K  A  L  R  N  Q  F  Q  S  S  T  T  R  I  I  T  N  L  N  K  S  E  P  A  I  L  S  S  T  S  P  Q  P  P  I  L  A  H  P  S  C  S  R  R  N  Q  I  P  F  C  L  Q  R  E  T  E  D  P  N  Q  K  V  S  P  C  P  L  V  Y  P  S  F  P  F  G  V  F  L  N  P  I  S  Q  I  G  V  V  K  S  E  N  D  G  G  V  V  V  G  E  D  S  L  K  I  W  A  D  S  V  K  K  K  R  K  R  K  M  N  K  H  K  L  K  K  L  R  K  R  L  R  R  K  T  K  A  *  V  K  F  D  V  P  F  R  H  N  V  N  C  F  *  L  K  D  S  P  F  S  H  V  L  A  I  L  S  *  K  Y  C  S  I  S  I  A  K  S  C  F  R  N  N  E  P  F  S  S  R  V  E  M  Y  V  W  D  L  L  V  R  L  C  V  T  V  A  V  *  H  R  *  A  I  I  L  E  A  F  R  A  I  L  K  N  F  *  E  I  L  P  H  L  *  I  V  V  A  V  I  Y  N  Y  L  N  S  E  E  H  G  S  I  A  S  C  C  Y  Y   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0034H10.2" strand="-"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="5707" stop="5282"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>423</number_coding_nucleotides>
                  <number_encoded_amino_acids>141</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>MASILRKALRNQFQSSTTRIITNLNKSEPAILSSTSPQPPILAHPSCSRRNQIPFCLQRETEDPNQKVSPCPLVYPSFPFGVFLNPISQIGVVKSENDGGVVVGEDSLKIWADSVKKKRKRKMNKHKLKKLRKRLRRKTKA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="-" PGL_start="7560" PGL_stop="6556"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="7560" e_stop="7300"/>
            <exon e_start="7231" e_stop="6982"/>
            <exon e_start="6786" e_stop="6556"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.940" acc_prob="0.845" e_score="0.996"/>
          <exon-intron don_prob="0.626" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="0.987"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.996">
            <gDNA_exon_boundary e_start="7560" e_stop="7300" e_length="261"/>
          </exon>
          <intron i_serial="1" don_prob="0.940" acc_prob="0.845">
            <gDNA_intron_boundary i_start="7299" i_stop="7232" i_length="68"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="7231" e_stop="6982" e_length="250"/>
          </exon>
          <intron i_serial="2" don_prob="0.626" acc_prob="0.999">
            <gDNA_intron_boundary i_start="6981" i_stop="6787" i_length="195"/>
          </intron>
          <exon e_serial="3" e_score="0.987">
            <gDNA_exon_boundary e_start="6786" e_stop="6556" e_length="231"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7560" stop="7300"/>
              <exon start="7231" stop="6982"/>
              <exon start="6786" stop="6556"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U586161" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCCCAAGACATGGAAATCCCCAAACTTACACTTGTTTCCTCTTCCATCCAAAACCAAAACACAGCCCTCAATAATAATAACTCCAAAAGCCTATAATAATGAAGATAACAATTCAACAGCAGGAAAAATCAAACGAATGGTACTTACTCAACAAGGAAGAACCAAACTAAACATTTTACCAGACAAGGAATTTTATGCCTATCCAAGATTCGTCACACACGTCGATGATCGTTTCATTTCCAATTTAACCGATCTTTACAG : GAAATGTTTGAAACCTGAATTTGAAATTCTTGACCTTATGAGCTCATGGGTCAGTCATTTACCACAAGAAGTGAAGTACAAAAAGGTGGTTGGTCATGGACTTAATGCCCAAGAGCTAGCAAAAAATCCCAAATTGGATTATTTCTTTGTGAGGGATTTGAATGAAGATGAGAAATTTGAGTTTGAAAATTGTAGTTTTGATGCTGTTTTATGCACTGTCAGTGTGCAGTATCTTCAACAGCCTGAGAAG : GTTTTCGCGGAAGTATTTCGAATTCTAAGACCTGGAGGAGTGTTTATTGTAAGTTTCAGTAACAGATTGTTCTACGATAAAGCAATTAGTGCCTGGAGGGACAGTACAGGATACGGGAGAGTGCAACTTGTGGTACAATATTTTCAATGTATTAAGGGATTTACAGAGCCACAAGTGATTCGTAAATTACCAACTAATGATGATCAACAAAATAAATCACCTCTCAGTAAA</gDNA_template>
            <first_frame> S  Q  D  M  E  I  P  K  L  T  L  V  S  S  S  I  Q  N  Q  N  T  A  L  N  N  N  N  S  K  S  L  *  *  *  R  *  Q  F  N  S  R  K  N  Q  T  N  G  T  Y  S  T  R  K  N  Q  T  K  H  F  T  R  Q  G  I  L  C  L  S  K  I  R  H  T  R  R  *  S  F  H  F  Q  F  N  R  S  L  Q  :  E  M  F  E  T  *  I  *  N  S  *  P  Y  E  L  M  G  Q  S  F  T  T  R  S  E  V  Q  K  G  G  W  S  W  T  *  C  P  R  A  S  K  K  S  Q  I  G  L  F  L  C  E  G  F  E  *  R  *  E  I  *  V  *  K  L  *  F  *  C  C  F  M  H  C  Q  C  A  V  S  S  T  A  *  E   : G  F  R  G  S  I  S  N  S  K  T  W  R  S  V  Y  C  K  F  Q  *  Q  I  V  L  R  *  S  N  *  C  L  E  G  Q  Y  R  I  R  E  S  A  T  C  G  T  I  F  S  M  Y  *  G  I  Y  R  A  T  S  D  S  *  I  T  N  *  *  *  S  T  K  *  I  T  S  Q  *  </first_frame>
            <second_frame>  P  K  T  W  K  S  P  N  L  H  L  F  P  L  P  S  K  T  K  T  Q  P  S  I  I  I  T  P  K  A  Y  N  N  E  D  N  N  S  T  A  G  K  I  K  R  M  V  L  T  Q  Q  G  R  T  K  L  N  I  L  P  D  K  E  F  Y  A  Y  P  R  F  V  T  H  V  D  D  R  F  I  S  N  L  T  D  L  Y  R :   K  C  L  K  P  E  F  E  I  L  D  L  M  S  S  W  V  S  H  L  P  Q  E  V  K  Y  K  K  V  V  G  H  G  L  N  A  Q  E  L  A  K  N  P  K  L  D  Y  F  F  V  R  D  L  N  E  D  E  K  F  E  F  E  N  C  S  F  D  A  V  L  C  T  V  S  V  Q  Y  L  Q  Q  P  E  K  :  V  F  A  E  V  F  R  I  L  R  P  G  G  V  F  I  V  S  F  S  N  R  L  F  Y  D  K  A  I  S  A  W  R  D  S  T  G  Y  G  R  V  Q  L  V  V  Q  Y  F  Q  C  I  K  G  F  T  E  P  Q  V  I  R  K  L  P  T  N  D  D  Q  Q  N  K  S  P  L  S  K </second_frame>
            <third_frame>   P  R  H  G  N  P  Q  T  Y  T  C  F  L  F  H  P  K  P  K  H  S  P  Q  *  *  *  L  Q  K  P  I  I  M  K  I  T  I  Q  Q  Q  E  K  S  N  E  W  Y  L  L  N  K  E  E  P  N  *  T  F  Y  Q  T  R  N  F  M  P  I  Q  D  S  S  H  T  S  M  I  V  S  F  P  I  *  P  I  F  T   : G  N  V  *  N  L  N  L  K  F  L  T  L  *  A  H  G  S  V  I  Y  H  K  K  *  S  T  K  R  W  L  V  M  D  L  M  P  K  S  *  Q  K  I  P  N  W  I  I  S  L  *  G  I  *  M  K  M  R  N  L  S  L  K  I  V  V  L  M  L  F  Y  A  L  S  V  C  S  I  F  N  S  L  R  R :   F  S  R  K  Y  F  E  F  *  D  L  E  E  C  L  L  *  V  S  V  T  D  C  S  T  I  K  Q  L  V  P  G  G  T  V  Q  D  T  G  E  C  N  L  W  Y  N  I  F  N  V  L  R  D  L  Q  S  H  K  *  F  V  N  Y  Q  L  M  M  I  N  K  I  N  H  L  S  V   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0034H10.2" strand="-"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="7559" stop="7300"/>
                    <exon start="7231" stop="6982"/>
                    <exon start="6786" stop="6556"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>741</number_coding_nucleotides>
                  <number_encoded_amino_acids>247</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PKTWKSPNLHLFPLPSKTKTQPSIIITPKAYNNEDNNSTAGKIKRMVLTQQGRTKLNILPDKEFYAYPRFVTHVDDRFISNLTDLYRKCLKPEFEILDLMSSWVSHLPQEVKYKKVVGHGLNAQELAKNPKLDYFFVRDLNEDEKFEFENCSFDAVLCTVSVQYLQQPEKVFAEVFRILRPGGVFIVSFSNRLFYDKAISAWRDSTGYGRVQLVVQYFQCIKGFTEPQVIRKLPTNDDQQNKSPLSK</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="+" PGL_start="6951" PGL_stop="7565"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="6951" e_stop="7565"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.990"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.990">
            <gDNA_exon_boundary e_start="6951" e_stop="7565" e_length="615"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="6951" stop="7565"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U586160" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTTGATTCTCTTTATCATCTAATTAAGTTACCTTCTCAGGCTGTTGAAGATACTGCACACTGACAGTGCATAAAACAGCATCAAAACTACAATTTTCAAACTCAAATTTCTCATCTTCATTCAAATCCCTCACAAAGAAATAATCCAATTTGGGATTTTTTGCTAGCTCTTGGGCATTAAGTCCATGACCAACCACCTTTTTGTACTTCACTTCTTGTGGTAAATGACTGACCCATGAGCTCATAAGGTCAAGAATTTCAAATTCAGGTTTCAAACATTTCCTATAAAAACAGCGCAGGGGAGTCAAATTAATCAATAACATATTTGAACTTAATTTTGACACCGTTACCTGTAAAGATCGGTTAAATTGGAAATGAAACGATCATCGACGTGTGTGACGAATCTTGGATAGGCATAAAATTCCTTGTCTGGTAAAATGTTTAGTTTGGTTCTTCCTTGTTGAGTAAGTACCATTCGTTTGATTTTTCCTGCTGTTGAATTGTTATCTTCATTATTATAGGCTTTTGGAGTTATTATTATTGAGGGCTGTGTTTTGGTTTTGGATGGAAGAGGAAACAAGTGTAAGTTTGGGGATTTCCATGTCTTGGGATGGGA</gDNA_template>
            <first_frame> L  D  S  L  Y  H  L  I  K  L  P  S  Q  A  V  E  D  T  A  H  *  Q  C  I  K  Q  H  Q  N  Y  N  F  Q  T  Q  I  S  H  L  H  S  N  P  S  Q  R  N  N  P  I  W  D  F  L  L  A  L  G  H  *  V  H  D  Q  P  P  F  C  T  S  L  L  V  V  N  D  *  P  M  S  S  *  G  Q  E  F  Q  I  Q  V  S  N  I  S  Y  K  N  S  A  G  E  S  N  *  S  I  T  Y  L  N  L  I  L  T  P  L  P  V  K  I  G  *  I  G  N  E  T  I  I  D  V  C  D  E  S  W  I  G  I  K  F  L  V  W  *  N  V  *  F  G  S  S  L  L  S  K  Y  H  S  F  D  F  S  C  C  *  I  V  I  F  I  I  I  G  F  W  S  Y  Y  Y  *  G  L  C  F  G  F  G  W  K  R  K  Q  V  *  V  W  G  F  P  C  L  G  M  G </first_frame>
            <second_frame>  L  I  L  F  I  I  *  L  S  Y  L  L  R  L  L  K  I  L  H  T  D  S  A  *  N  S  I  K  T  T  I  F  K  L  K  F  L  I  F  I  Q  I  P  H  K  E  I  I  Q  F  G  I  F  C  *  L  L  G  I  K  S  M  T  N  H  L  F  V  L  H  F  L  W  *  M  T  D  P  *  A  H  K  V  K  N  F  K  F  R  F  Q  T  F  P  I  K  T  A  Q  G  S  Q  I  N  Q  *  H  I  *  T  *  F  *  H  R  Y  L  *  R  S  V  K  L  E  M  K  R  S  S  T  C  V  T  N  L  G  *  A  *  N  S  L  S  G  K  M  F  S  L  V  L  P  C  *  V  S  T  I  R  L  I  F  P  A  V  E  L  L  S  S  L  L  *  A  F  G  V  I  I  I  E  G  C  V  L  V  L  D  G  R  G  N  K  C  K  F  G  D  F  H  V  L  G  W   </second_frame>
            <third_frame>   *  F  S  L  S  S  N  *  V  T  F  S  G  C  *  R  Y  C  T  L  T  V  H  K  T  A  S  K  L  Q  F  S  N  S  N  F  S  S  S  F  K  S  L  T  K  K  *  S  N  L  G  F  F  A  S  S  W  A  L  S  P  *  P  T  T  F  L  Y  F  T  S  C  G  K  *  L  T  H  E  L  I  R  S  R  I  S  N  S  G  F  K  H  F  L  *  K  Q  R  R  G  V  K  L  I  N  N  I  F  E  L  N  F  D  T  V  T  C  K  D  R  L  N  W  K  *  N  D  H  R  R  V  *  R  I  L  D  R  H  K  I  P  C  L  V  K  C  L  V  W  F  F  L  V  E  *  V  P  F  V  *  F  F  L  L  L  N  C  Y  L  H  Y  Y  R  L  L  E  L  L  L  L  R  A  V  F  W  F  W  M  E  E  E  T  S  V  S  L  G  I  S  M  S  W  D  G  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02SLe0034H10.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="+" PGL_start="16167" PGL_stop="20729"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="16167" e_stop="16426"/>
            <exon e_start="16532" e_stop="16671"/>
            <exon e_start="18337" e_stop="18419"/>
            <exon e_start="19717" e_stop="19921"/>
            <exon e_start="20024" e_stop="20092"/>
            <exon e_start="20439" e_stop="20729"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.990" e_score="1.000"/>
          <exon-intron don_prob="0.963" acc_prob="0.916" e_score="1.000"/>
          <exon-intron don_prob="0.942" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.913" acc_prob="0.973" e_score="1.000"/>
          <exon-intron don_prob="0.901" acc_prob="0.997" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="16167" e_stop="16426" e_length="260"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.990">
            <gDNA_intron_boundary i_start="16427" i_stop="16531" i_length="105"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="16532" e_stop="16671" e_length="140"/>
          </exon>
          <intron i_serial="2" don_prob="0.963" acc_prob="0.916">
            <gDNA_intron_boundary i_start="16672" i_stop="18336" i_length="1665"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="18337" e_stop="18419" e_length="83"/>
          </exon>
          <intron i_serial="3" don_prob="0.942" acc_prob="0.989">
            <gDNA_intron_boundary i_start="18420" i_stop="19716" i_length="1297"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="19717" e_stop="19921" e_length="205"/>
          </exon>
          <intron i_serial="4" don_prob="0.913" acc_prob="0.973">
            <gDNA_intron_boundary i_start="19922" i_stop="20023" i_length="102"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="20024" e_stop="20092" e_length="69"/>
          </exon>
          <intron i_serial="5" don_prob="0.901" acc_prob="0.997">
            <gDNA_intron_boundary i_start="20093" i_stop="20438" i_length="346"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="20439" e_stop="20729" e_length="291"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16167" stop="16426"/>
              <exon start="16532" stop="16671"/>
              <exon start="18337" stop="18419"/>
              <exon start="19717" stop="19921"/>
              <exon start="20024" stop="20092"/>
              <exon start="20439" stop="20729"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U573044" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTTGCTTATATACGTTTCCTTATAAAATCTGTATACAAAATTTGGACGTCACCTCTTACATTACATTACTTTACTTTATTTTAGTGTTATCCGTTTCCCCCTCTCTCTCGTCTTTGCTTTCTTCATACTTACGTTGCTCATCTTTGACTCTTTTCCAACTGTCTTAACTTCTCCGACTGCATAACTCTGCTCCGGCGCTTCTCTTCATCGGAAAATGTCTTACGATTATCTCTTCAAGTACATAATCATCGGAGATACAG : GAGTCGGAAAATCGTGTCTGCTGCTGCAATTCACAGACAAGAGGTTTCAGCCAGTGCATGATCTCACCATTGGAGTCGAGTTTGGGGCTCGTATGGTCACCATTGACGGCAAGCCTATTAAACTTCAAATTTGGGACACT : GCTGGGCAGGAATCTTTCAGATCCATCACCAGGTCATATTACAGAGGAGCAGCTGGCGCACTTCTGGTTTATGACATCACCAG : GAGAGAGACATTTAATCACCTAGCCAGCTGGCTTGAAGATGCTAGGCAGCATGCAAATCCAAATATGACTATAATGCTGGTAGGAAATAAGAGTGATCTGTCTCATCGAAGAGCTGTCAGTAAAGAGGAGGGAGAACAATTTGCAAAAGAAAATGGGCTTTTGTTTCTTGAGGCGTCTGCTAGAACTGCTCAAAGTGTTGAGGAG : GCCTTTATACAGACTGCTGCCAAGATACTTCAAAAGATCCAAGAAGGTGTTTTTGATGTCTCCAACGAG : TCATCTGGAATCAAGGTTGGTTATGGGCGTACGCAAGGTCCAGCTGGTCCAAGGGATGGAGCAGTTGCTCAAAGAGGTGGATGCTGCAGCTAGTGTACAATAGGGTTCCAAATTGTAATGATACTCATGAACTTGCTTTGGTCCCTCACTAGACTTGTACAGCTCAAATTCAGTTGACTCAATTTACTCATATTATTCAGAGTAAAATAGGTTCTTAAGGAGCTGTTAATTCCAGTACATGTGGTGTTTGAGTTGCATTCAATGTTAATATAGTACATGGATTGTTGTTTT</gDNA_template>
            <first_frame> F  A  Y  I  R  F  L  I  K  S  V  Y  K  I  W  T  S  P  L  T  L  H  Y  F  T  L  F  *  C  Y  P  F  P  P  L  S  R  L  C  F  L  H  T  Y  V  A  H  L  *  L  F  S  N  C  L  N  F  S  D  C  I  T  L  L  R  R  F  S  S  S  E  N  V  L  R  L  S  L  Q  V  H  N  H  R  R  Y  R :   S  R  K  I  V  S  A  A  A  I  H  R  Q  E  V  S  A  S  A  *  S  H  H  W  S  R  V  W  G  S  Y  G  H  H  *  R  Q  A  Y  *  T  S  N  L  G  H   : C  W  A  G  I  F  Q  I  H  H  Q  V  I  L  Q  R  S  S  W  R  T  S  G  L  *  H  H  Q  :  E  R  D  I  *  S  P  S  Q  L  A  *  R  C  *  A  A  C  K  S  K  Y  D  Y  N  A  G  R  K  *  E  *  S  V  S  S  K  S  C  Q  *  R  G  G  R  T  I  C  K  R  K  W  A  F  V  S  *  G  V  C  *  N  C  S  K  C  *  G   : G  L  Y  T  D  C  C  Q  D  T  S  K  D  P  R  R  C  F  *  C  L  Q  R   : V  I  W  N  Q  G  W  L  W  A  Y  A  R  S  S  W  S  K  G  W  S  S  C  S  K  R  W  M  L  Q  L  V  Y  N  R  V  P  N  C  N  D  T  H  E  L  A  L  V  P  H  *  T  C  T  A  Q  I  Q  L  T  Q  F  T  H  I  I  Q  S  K  I  G  S  *  G  A  V  N  S  S  T  C  G  V  *  V  A  F  N  V  N  I  V  H  G  L  L  F  </first_frame>
            <second_frame>  L  L  I  Y  V  S  L  *  N  L  Y  T  K  F  G  R  H  L  L  H  Y  I  T  L  L  Y  F  S  V  I  R  F  P  L  S  L  V  F  A  F  F  I  L  T  L  L  I  F  D  S  F  P  T  V  L  T  S  P  T  A  *  L  C  S  G  A  S  L  H  R  K  M  S  Y  D  Y  L  F  K  Y  I  I  I  G  D  T   : G  V  G  K  S  C  L  L  L  Q  F  T  D  K  R  F  Q  P  V  H  D  L  T  I  G  V  E  F  G  A  R  M  V  T  I  D  G  K  P  I  K  L  Q  I  W  D  T  :  A  G  Q  E  S  F  R  S  I  T  R  S  Y  Y  R  G  A  A  G  A  L  L  V  Y  D  I  T  R :   R  E  T  F  N  H  L  A  S  W  L  E  D  A  R  Q  H  A  N  P  N  M  T  I  M  L  V  G  N  K  S  D  L  S  H  R  R  A  V  S  K  E  E  G  E  Q  F  A  K  E  N  G  L  L  F  L  E  A  S  A  R  T  A  Q  S  V  E  E  :  A  F  I  Q  T  A  A  K  I  L  Q  K  I  Q  E  G  V  F  D  V  S  N  E  :  S  S  G  I  K  V  G  Y  G  R  T  Q  G  P  A  G  P  R  D  G  A  V  A  Q  R  G  G  C  C  S  *  C  T  I  G  F  Q  I  V  M  I  L  M  N  L  L  W  S  L  T  R  L  V  Q  L  K  F  S  *  L  N  L  L  I  L  F  R  V  K  *  V  L  K  E  L  L  I  P  V  H  V  V  F  E  L  H  S  M  L  I  *  Y  M  D  C  C  F </second_frame>
            <third_frame>   C  L  Y  T  F  P  Y  K  I  C  I  Q  N  L  D  V  T  S  Y  I  T  L  L  Y  F  I  L  V  L  S  V  S  P  S  L  S  S  L  L  S  S  Y  L  R  C  S  S  L  T  L  F  Q  L  S  *  L  L  R  L  H  N  S  A  P  A  L  L  F  I  G  K  C  L  T  I  I  S  S  S  T  *  S  S  E  I  Q  :  E  S  E  N  R  V  C  C  C  N  S  Q  T  R  G  F  S  Q  C  M  I  S  P  L  E  S  S  L  G  L  V  W  S  P  L  T  A  S  L  L  N  F  K  F  G  T  L :   L  G  R  N  L  S  D  P  S  P  G  H  I  T  E  E  Q  L  A  H  F  W  F  M  T  S  P   : G  E  R  H  L  I  T  *  P  A  G  L  K  M  L  G  S  M  Q  I  Q  I  *  L  *  C  W  *  E  I  R  V  I  C  L  I  E  E  L  S  V  K  R  R  E  N  N  L  Q  K  K  M  G  F  C  F  L  R  R  L  L  E  L  L  K  V  L  R  R :   P  L  Y  R  L  L  P  R  Y  F  K  R  S  K  K  V  F  L  M  S  P  T  S :   H  L  E  S  R  L  V  M  G  V  R  K  V  Q  L  V  Q  G  M  E  Q  L  L  K  E  V  D  A  A  A  S  V  Q  *  G  S  K  L  *  *  Y  S  *  T  C  F  G  P  S  L  D  L  Y  S  S  N  S  V  D  S  I  Y  S  Y  Y  S  E  *  N  R  F  L  R  S  C  *  F  Q  Y  M  W  C  L  S  C  I  Q  C  *  Y  S  T  W  I  V  V   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0034H10.2" strand="+"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="16351" stop="16426"/>
                    <exon start="16532" stop="16671"/>
                    <exon start="18337" stop="18419"/>
                    <exon start="19717" stop="19921"/>
                    <exon start="20024" stop="20092"/>
                    <exon start="20439" stop="20531"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>663</number_coding_nucleotides>
                  <number_encoded_amino_acids>221</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LCSGASLHRKMSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLVGNKSDLSHRRAVSKEEGEQFAKENGLLFLEASARTAQSVEEAFIQTAAKILQKIQEGVFDVSNESSGIKVGYGRTQGPAGPRDGAVAQRGGCCS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="-" PGL_start="28407" PGL_stop="23659"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="28040" e_stop="27295"/>
            <exon e_start="26430" e_stop="26346"/>
            <exon e_start="26258" e_stop="26170"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.868" acc_prob="1.000" e_score="0.999"/>
          <exon-intron don_prob="0.933" acc_prob="0.628" e_score="1.000"/>
          <exon-only e_score="0.989"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.999">
            <gDNA_exon_boundary e_start="28040" e_stop="27295" e_length="746"/>
          </exon>
          <intron i_serial="1" don_prob="0.868" acc_prob="1.000">
            <gDNA_intron_boundary i_start="27294" i_stop="26431" i_length="864"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="26430" e_stop="26346" e_length="85"/>
          </exon>
          <intron i_serial="2" don_prob="0.933" acc_prob="0.628">
            <gDNA_intron_boundary i_start="26345" i_stop="26259" i_length="87"/>
          </intron>
          <exon e_serial="3" e_score="0.989">
            <gDNA_exon_boundary e_start="26258" e_stop="26170" e_length="89"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28040" stop="27295"/>
              <exon start="26430" stop="26346"/>
              <exon start="26258" stop="26170"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U577066" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="27826" stop="27343"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U589497" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ACGTCTTGGGTTTGTATTATTTTAGTGTTAACGTGTCTTCTCTCTTGTTTCTTACTGTTATCCTGCTGTCGTAATTGCGTAGCTTGTAAAAGGACAATGTAGAAGAGCCAAAGTCTATATTGAGTCGGTTTTGAATGATTACAAGTCTCAATTTGATAGCCGCCTTTCTCTTCTTAACCTGCCCCTGCCGCGTGAAGTAATATTCAAGATTCACAACCTATCCAGAAACTTCAGTTGTTTGTAAATATAAAAAACCATTCTTGATAACAGATTCAGATTATTGGTGTATCATTTGGGTTTTTTTTTTTGATTGATTTTGACAGGCCTTTTTGATTGATTGTATTGTGGAACAAAACAAAAAAGTTGTCTTTTTTTCTTTTTGGCTTAAGGGAGTTAGTAATTTTGTAGATAAGTTGACTTTGATGGGTGGCAAGAGTTCAAGAGAGGATAGTTGGAGGCAAGCTTCATCGACTCGATCTTCCTCTTGGAATCAATACGATTATCCTCAAACTGCTTATCCTCAAGATAGTTACAGTTACTCACAGCAGACGGCTGTTCCTTCTTATGCACCACCACCACCATCCCAACAGAATTATCCCCCACAGCACCAACACAATTATTCTTCACAACCCCAACAGAATTATGCTTCTCATGAACATGAATCTCGGACTCATACTCATGCTCCACGACCAAGGCTTGATCGGAGATACTCGAGGATTGCAGACAATTATAATTCCCTGGATGAG : GTGACTGAAGCCCTTGCACGAGCTGGTTTGGAGTCTTCGAATCTTATTGTGGGTATTGATTTCACCAAGAGTAATGAATGGACAG : GTAAGAGGTCTTTTAGTAATCGGAGTCTACATCACATTGGGCAGAATTTGAACCCATATGAGCAAGCCATTTCCATAATTGGAAAAACC</gDNA_template>
            <first_frame> T  S  W  V  C  I  I  L  V  L  T  C  L  L  S  C  F  L  L  L  S  C  C  R  N  C  V  A  C  K  R  T  M  *  K  S  Q  S  L  Y  *  V  G  F  E  *  L  Q  V  S  I  *  *  P  P  F  S  S  *  P  A  P  A  A  *  S  N  I  Q  D  S  Q  P  I  Q  K  L  Q  L  F  V  N  I  K  N  H  S  *  *  Q  I  Q  I  I  G  V  S  F  G  F  F  F  L  I  D  F  D  R  P  F  *  L  I  V  L  W  N  K  T  K  K  L  S  F  F  L  F  G  L  R  E  L  V  I  L  *  I  S  *  L  *  W  V  A  R  V  Q  E  R  I  V  G  G  K  L  H  R  L  D  L  P  L  G  I  N  T  I  I  L  K  L  L  I  L  K  I  V  T  V  T  H  S  R  R  L  F  L  L  M  H  H  H  H  H  P  N  R  I  I  P  H  S  T  N  T  I  I  L  H  N  P  N  R  I  M  L  L  M  N  M  N  L  G  L  I  L  M  L  H  D  Q  G  L  I  G  D  T  R  G  L  Q  T  I  I  I  P  W  M  R :   *  L  K  P  L  H  E  L  V  W  S  L  R  I  L  L  W  V  L  I  S  P  R  V  M  N  G  Q  :  V  R  G  L  L  V  I  G  V  Y  I  T  L  G  R  I  *  T  H  M  S  K  P  F  P  *  L  E  K   </first_frame>
            <second_frame>  R  L  G  F  V  L  F  *  C  *  R  V  F  S  L  V  S  Y  C  Y  P  A  V  V  I  A  *  L  V  K  G  Q  C  R  R  A  K  V  Y  I  E  S  V  L  N  D  Y  K  S  Q  F  D  S  R  L  S  L  L  N  L  P  L  P  R  E  V  I  F  K  I  H  N  L  S  R  N  F  S  C  L  *  I  *  K  T  I  L  D  N  R  F  R  L  L  V  Y  H  L  G  F  F  F  *  L  I  L  T  G  L  F  D  *  L  Y  C  G  T  K  Q  K  S  C  L  F  F  F  L  A  *  G  S  *  *  F  C  R  *  V  D  F  D  G  W  Q  E  F  K  R  G  *  L  E  A  S  F  I  D  S  I  F  L  L  E  S  I  R  L  S  S  N  C  L  S  S  R  *  L  Q  L  L  T  A  D  G  C  S  F  L  C  T  T  T  T  I  P  T  E  L  S  P  T  A  P  T  Q  L  F  F  T  T  P  T  E  L  C  F  S  *  T  *  I  S  D  S  Y  S  C  S  T  T  K  A  *  S  E  I  L  E  D  C  R  Q  L  *  F  P  G  *   : G  D  *  S  P  C  T  S  W  F  G  V  F  E  S  Y  C  G  Y  *  F  H  Q  E  *  *  M  D  R :   *  E  V  F  *  *  S  E  S  T  S  H  W  A  E  F  E  P  I  *  A  S  H  F  H  N  W  K  N  </second_frame>
            <third_frame>   V  L  G  L  Y  Y  F  S  V  N  V  S  S  L  L  F  L  T  V  I  L  L  S  *  L  R  S  L  *  K  D  N  V  E  E  P  K  S  I  L  S  R  F  *  M  I  T  S  L  N  L  I  A  A  F  L  F  L  T  C  P  C  R  V  K  *  Y  S  R  F  T  T  Y  P  E  T  S  V  V  C  K  Y  K  K  P  F  L  I  T  D  S  D  Y  W  C  I  I  W  V  F  F  F  D  *  F  *  Q  A  F  L  I  D  C  I  V  E  Q  N  K  K  V  V  F  F  S  F  W  L  K  G  V  S  N  F  V  D  K  L  T  L  M  G  G  K  S  S  R  E  D  S  W  R  Q  A  S  S  T  R  S  S  S  W  N  Q  Y  D  Y  P  Q  T  A  Y  P  Q  D  S  Y  S  Y  S  Q  Q  T  A  V  P  S  Y  A  P  P  P  P  S  Q  Q  N  Y  P  P  Q  H  Q  H  N  Y  S  S  Q  P  Q  Q  N  Y  A  S  H  E  H  E  S  R  T  H  T  H  A  P  R  P  R  L  D  R  R  Y  S  R  I  A  D  N  Y  N  S  L  D  E  :  V  T  E  A  L  A  R  A  G  L  E  S  S  N  L  I  V  G  I  D  F  T  K  S  N  E  W  T   : G  K  R  S  F  S  N  R  S  L  H  H  I  G  Q  N  L  N  P  Y  E  Q  A  I  S  I  I  G  K  T </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0034H10.2" strand="-"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="27720" stop="27295"/>
                    <exon start="26430" stop="26346"/>
                    <exon start="26258" stop="26170"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>600</number_coding_nucleotides>
                  <number_encoded_amino_acids>200</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QAFLIDCIVEQNKKVVFFSFWLKGVSNFVDKLTLMGGKSSREDSWRQASSTRSSSWNQYDYPQTAYPQDSYSYSQQTAVPSYAPPPPSQQNYPPQHQHNYSSQPQQNYASHEHESRTHTHAPRPRLDRRYSRIADNYNSLDEVTEALARAGLESSNLIVGIDFTKSNEWTGKRSFSNRSLHHIGQNLNPYEQAISIIGKT</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="24346" e_stop="23659"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.993"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.993">
            <gDNA_exon_boundary e_start="24346" e_stop="23659" e_length="688"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24346" stop="23659"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U577064" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CAGACATGTTGTGAGTGTGGGAGAGCGCTTGAGAATTGCCCAATATGTCGAAGTTCAATTCAAACCAGAATAAAGCTCTATTGAGCTGCTTGTTTTGCCCTGATTCCTTTTGCTATTCCAACCTGCAATGCTTTTTGATCAGTTTGGATGTGAAACCATGGTGATGAAGCTGATTTTTTTATTTGTTGGATATGGCTTTGGCCTTGTGCTAATGCAAATTTCCTTCTGTACATGGCTTGGTTCTTGTTTGTGTTTTGCTTTTGCCAAATTACTTTACTTCCAACTATAGAAGCATAAGATCCCTAGATTCAAATTGTCTGTAAATCAACTGTTTATTGTGCAGTGACCTTTAAAGAGTCTTGTGCTGATACTAGACCTAATACATTGCCATTTGTCAATATGTACCGACTATTTTCCACCAGAGAATGTGCAAACAAAGAAGAATGTGATTCAGGAACAAGAATATTTCATAAGAGCGAGCGAGAAGGTGATTTCTATCCGATCATTTTGGTGGACACGATTATTTGGTATATGTTGCTTATGAGAGGTAAGCAGGAGGGGTCTAGTGGTCGATGAAGTGAGGAGAATAGCGAGTTTTTGGGTTTACACCTCAGCGGAAACAAAAGTAGTATGGTATTGATTGTTTCTCATTTTGTCCAAGTTTTAAGTGGATATAGTATTAGCAAGC</gDNA_template>
            <first_frame> Q  T  C  C  E  C  G  R  A  L  E  N  C  P  I  C  R  S  S  I  Q  T  R  I  K  L  Y  *  A  A  C  F  A  L  I  P  F  A  I  P  T  C  N  A  F  *  S  V  W  M  *  N  H  G  D  E  A  D  F  F  I  C  W  I  W  L  W  P  C  A  N  A  N  F  L  L  Y  M  A  W  F  L  F  V  F  C  F  C  Q  I  T  L  L  P  T  I  E  A  *  D  P  *  I  Q  I  V  C  K  S  T  V  Y  C  A  V  T  F  K  E  S  C  A  D  T  R  P  N  T  L  P  F  V  N  M  Y  R  L  F  S  T  R  E  C  A  N  K  E  E  C  D  S  G  T  R  I  F  H  K  S  E  R  E  G  D  F  Y  P  I  I  L  V  D  T  I  I  W  Y  M  L  L  M  R  G  K  Q  E  G  S  S  G  R  *  S  E  E  N  S  E  F  L  G  L  H  L  S  G  N  K  S  S  M  V  L  I  V  S  H  F  V  Q  V  L  S  G  Y  S  I  S  K  </first_frame>
            <second_frame>  R  H  V  V  S  V  G  E  R  L  R  I  A  Q  Y  V  E  V  Q  F  K  P  E  *  S  S  I  E  L  L  V  L  P  *  F  L  L  L  F  Q  P  A  M  L  F  D  Q  F  G  C  E  T  M  V  M  K  L  I  F  L  F  V  G  Y  G  F  G  L  V  L  M  Q  I  S  F  C  T  W  L  G  S  C  L  C  F  A  F  A  K  L  L  Y  F  Q  L  *  K  H  K  I  P  R  F  K  L  S  V  N  Q  L  F  I  V  Q  *  P  L  K  S  L  V  L  I  L  D  L  I  H  C  H  L  S  I  C  T  D  Y  F  P  P  E  N  V  Q  T  K  K  N  V  I  Q  E  Q  E  Y  F  I  R  A  S  E  K  V  I  S  I  R  S  F  W  W  T  R  L  F  G  I  C  C  L  *  E  V  S  R  R  G  L  V  V  D  E  V  R  R  I  A  S  F  W  V  Y  T  S  A  E  T  K  V  V  W  Y  *  L  F  L  I  L  S  K  F  *  V  D  I  V  L  A  S </second_frame>
            <third_frame>   D  M  L  *  V  W  E  S  A  *  E  L  P  N  M  S  K  F  N  S  N  Q  N  K  A  L  L  S  C  L  F  C  P  D  S  F  C  Y  S  N  L  Q  C  F  L  I  S  L  D  V  K  P  W  *  *  S  *  F  F  Y  L  L  D  M  A  L  A  L  C  *  C  K  F  P  S  V  H  G  L  V  L  V  C  V  L  L  L  P  N  Y  F  T  S  N  Y  R  S  I  R  S  L  D  S  N  C  L  *  I  N  C  L  L  C  S  D  L  *  R  V  L  C  *  Y  *  T  *  Y  I  A  I  C  Q  Y  V  P  T  I  F  H  Q  R  M  C  K  Q  R  R  M  *  F  R  N  K  N  I  S  *  E  R  A  R  R  *  F  L  S  D  H  F  G  G  H  D  Y  L  V  Y  V  A  Y  E  R  *  A  G  G  V  *  W  S  M  K  *  G  E  *  R  V  F  G  F  T  P  Q  R  K  Q  K  *  Y  G  I  D  C  F  S  F  C  P  S  F  K  W  I  *  Y  *  Q   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0034H10.2" strand="-"/>
                <serials PGL_serial="5" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="24040" stop="23771"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>267</number_coding_nucleotides>
                  <number_encoded_amino_acids>89</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IQIVCKSTVYCAVTFKESCADTRPNTLPFVNMYRLFSTRECANKEECDSGTRIFHKSEREGDFYPIILVDTIIWYMLLMRGKQEGSSGR*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0034H10.2" strand="-"/>
                <serials PGL_serial="5" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="24000" stop="23803"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>195</number_coding_nucleotides>
                  <number_encoded_amino_acids>65</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PLKSLVLILDLIHCHLSICTDYFPPENVQTKKNVIQEQEYFIRASEKVISIRSFWWTRLFGICCL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="28407" e_stop="28179"/>
            <exon e_start="27632" e_stop="27295"/>
            <exon e_start="26430" e_stop="26346"/>
            <exon e_start="26258" e_stop="26118"/>
            <exon e_start="26018" e_stop="25905"/>
            <exon e_start="25819" e_stop="25722"/>
            <exon e_start="25532" e_stop="25453"/>
            <exon e_start="25328" e_stop="25223"/>
            <exon e_start="25129" e_stop="25002"/>
            <exon e_start="24882" e_stop="24618"/>
            <exon e_start="24492" e_stop="24436"/>
            <exon e_start="24343" e_stop="23946"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.626" e_score="1.000"/>
          <exon-intron don_prob="0.868" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.933" acc_prob="0.628" e_score="1.000"/>
          <exon-intron don_prob="0.953" acc_prob="0.843" e_score="1.000"/>
          <exon-intron don_prob="0.722" acc_prob="0.982" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.977" acc_prob="0.984" e_score="1.000"/>
          <exon-intron don_prob="0.180" acc_prob="0.939" e_score="1.000"/>
          <exon-intron don_prob="0.985" acc_prob="0.984" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.997" e_score="1.000"/>
          <exon-only e_score="0.995"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="28407" e_stop="28179" e_length="229"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.626">
            <gDNA_intron_boundary i_start="28178" i_stop="27633" i_length="546"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="27632" e_stop="27295" e_length="338"/>
          </exon>
          <intron i_serial="2" don_prob="0.868" acc_prob="1.000">
            <gDNA_intron_boundary i_start="27294" i_stop="26431" i_length="864"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="26430" e_stop="26346" e_length="85"/>
          </exon>
          <intron i_serial="3" don_prob="0.933" acc_prob="0.628">
            <gDNA_intron_boundary i_start="26345" i_stop="26259" i_length="87"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="26258" e_stop="26118" e_length="141"/>
          </exon>
          <intron i_serial="4" don_prob="0.953" acc_prob="0.843">
            <gDNA_intron_boundary i_start="26117" i_stop="26019" i_length="99"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="26018" e_stop="25905" e_length="114"/>
          </exon>
          <intron i_serial="5" don_prob="0.722" acc_prob="0.982">
            <gDNA_intron_boundary i_start="25904" i_stop="25820" i_length="85"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="25819" e_stop="25722" e_length="98"/>
          </exon>
          <intron i_serial="6" don_prob="0.999" acc_prob="1.000">
            <gDNA_intron_boundary i_start="25721" i_stop="25533" i_length="189"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="25532" e_stop="25453" e_length="80"/>
          </exon>
          <intron i_serial="7" don_prob="0.977" acc_prob="0.984">
            <gDNA_intron_boundary i_start="25452" i_stop="25329" i_length="124"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="25328" e_stop="25223" e_length="106"/>
          </exon>
          <intron i_serial="8" don_prob="0.180" acc_prob="0.939">
            <gDNA_intron_boundary i_start="25222" i_stop="25130" i_length="93"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="25129" e_stop="25002" e_length="128"/>
          </exon>
          <intron i_serial="9" don_prob="0.985" acc_prob="0.984">
            <gDNA_intron_boundary i_start="25001" i_stop="24883" i_length="119"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="24882" e_stop="24618" e_length="265"/>
          </exon>
          <intron i_serial="10" don_prob="1.000" acc_prob="0.998">
            <gDNA_intron_boundary i_start="24617" i_stop="24493" i_length="125"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="24492" e_stop="24436" e_length="57"/>
          </exon>
          <intron i_serial="11" don_prob="0.996" acc_prob="0.997">
            <gDNA_intron_boundary i_start="24435" i_stop="24344" i_length="92"/>
          </intron>
          <exon e_serial="12" e_score="0.995">
            <gDNA_exon_boundary e_start="24343" e_stop="23946" e_length="398"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28407" stop="28179"/>
              <exon start="27632" stop="27295"/>
              <exon start="26430" stop="26346"/>
              <exon start="26258" stop="26118"/>
              <exon start="26018" stop="25905"/>
              <exon start="25819" stop="25722"/>
              <exon start="25532" stop="25453"/>
              <exon start="25328" stop="25223"/>
              <exon start="25129" stop="25002"/>
              <exon start="24882" stop="24618"/>
              <exon start="24492" stop="24436"/>
              <exon start="24343" stop="23946"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U577065" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAAAAACCCAACTTTTTCATCCGTGACCTAACGACGAAACTTCCATGTGTCTACACAAAACTTTTAACTCACATACTGTTTTAATTATATAGAAAAAAAAAAAGTGTATTCCCTTTCTGATACTGCAATTTTTTTTCAAACAGATTCGATTCGATCCACCATTAGAATCCAATAATCACAAGTTTTTAAACCCCACAACTCCAATTGCTGCACATCCTCTGTTTTTAAG : ATAAGTTGACTTTGATGGGTGGCAAGAGTTCAAGAGAGGATAGTTGGAGGCAAGCTTCATCGACTCGATCTTCCTCTTGGAATCAATACGATTATCCTCAAACTGCTTATCCTCAAGATAGTTACAGTTACTCACAGCAGACGGCTGTTCCTTCTTATGCACCACCACCACCATCCCAACAGAATTATCCCCCACAGCACCAACACAATTATTCTTCACAACCCCAACAGAATTATGCTTCTCATGAACATGAATCTCGGACTCATACTCATGCTCCACGACCAAGGCTTGATCGGAGATACTCGAGGATTGCAGACAATTATAATTCCCTGGATGAG : GTGACTGAAGCCCTTGCACGAGCTGGTTTGGAGTCTTCGAATCTTATTGTGGGTATTGATTTCACCAAGAGTAATGAATGGACAG : GTAAGAGGTCTTTTAGTAATCGGAGTCTACATCACATTGGGCAGAATTTGAACCCATATGAGCAAGCCATTTCCATAATTGGAAAAACCTTAGCGGCATTTGATGAGGATAACTTGATTCCTTGTTTTGGATTCGGAGATG : CATCAACTCATGATCAAGATGTATTCAGTTTCTTTCCCAATGAAAGATTTTGTAATGGTTTTGAGGAAGTTCTGTCTCGTTACAGAGAAATTGTCCCCCAGCTGAAGCTTGCAG : GACCAACATCATTCGCCCCGGTCATTGAAATGGCCATGACAATAGTTGAGCAGAGTGGAGGCCAGTACCATGTTCTATTAATCATTGCAGATGGGCAG : GTAACTAGAAGTGTTGATACTGGCCGTGGACAATTAAGTCCGCAGGAGCAGAAAACGGTGGATGCAATCGTACAAGCAAG : CAAGTTTCCCTTGTCAATTATACTGGTTGGGGTTGGCGATGGACCGTGGGATATGATGAAGGAATTTGATGATAATATTCCTGCTAGGGACTTCGATAATTTCCAG : TTCGTCAATTTCACGGACATAATGGCCAAAAATGTGCCTCAATCTCGAAAGGAGACGGAGTTTGCGCTTTCAGCATTGATGGAAATCCCTTCACAATACAAAGCGACGATGGAACTTAACTTACTGGG : TGGACAAAGTGGAAAATCTGTCAATAGGGTAGCTCTTCCTCCTCCTATGTATGGGGCAAGTTCTGTCGGTGGTTCAAAGACCTCACATGCACCAAGTTTTCAGCAGCCTGCAAGCTCGTATTATGGTTATGGAAGCCCTGCAGATGCAGAACCACATTTTCAGCCGACTTCAAGTTCTTACTACGACAGTGCTCGCCCAGTTGACAATGCTCCATCTGCTCCGAGTTCGCCCTACACTGCTCCCAGTTCTACCTATGACAATCAG : GTTTGCCCCATTTGTCTTACTAACCCAAAAGACATGGCCTTTGGCTGTGGGCATCAG : ACATGTTGTGAGTGTGGGAGAGCGCTTGAGAATTGCCCAATATGTCGAAGTTCAATTCAAACCAGAATAAAGCTCTATTGAGCTGCTTGTTTTGCCCTGATTCCTTTTGCTATTCCAACCTGCAATGCTTTTTGATCAGTTTGGATGTGAAACCATGGTGATGAAGCTGATTTTTTTATTTGTTGGATATGGCTTTGGCCTTGTGCTAATGCAAATTTCCTTCTGTACATGGCTTGGTTCTTGTTTGTGTTTTGCTTTTGCCAAATTACTTTACTTCCAACTATAGAAGCATAAGATCCCTAGATTCAAATTGTCTGTAAATCAACTGTTTATTGTGCAGTGACCTTTAAAGAGTCTTGTGCTGATACTAGACCTAATACATTGCCATTTGTCAATAT</gDNA_template>
            <first_frame> K  K  P  N  F  F  I  R  D  L  T  T  K  L  P  C  V  Y  T  K  L  L  T  H  I  L  F  *  L  Y  R  K  K  K  S  V  F  P  F  *  Y  C  N  F  F  S  N  R  F  D  S  I  H  H  *  N  P  I  I  T  S  F  *  T  P  Q  L  Q  L  L  H  I  L  C  F  *   : D  K  L  T  L  M  G  G  K  S  S  R  E  D  S  W  R  Q  A  S  S  T  R  S  S  S  W  N  Q  Y  D  Y  P  Q  T  A  Y  P  Q  D  S  Y  S  Y  S  Q  Q  T  A  V  P  S  Y  A  P  P  P  P  S  Q  Q  N  Y  P  P  Q  H  Q  H  N  Y  S  S  Q  P  Q  Q  N  Y  A  S  H  E  H  E  S  R  T  H  T  H  A  P  R  P  R  L  D  R  R  Y  S  R  I  A  D  N  Y  N  S  L  D  E  :  V  T  E  A  L  A  R  A  G  L  E  S  S  N  L  I  V  G  I  D  F  T  K  S  N  E  W  T   : G  K  R  S  F  S  N  R  S  L  H  H  I  G  Q  N  L  N  P  Y  E  Q  A  I  S  I  I  G  K  T  L  A  A  F  D  E  D  N  L  I  P  C  F  G  F  G  D   : A  S  T  H  D  Q  D  V  F  S  F  F  P  N  E  R  F  C  N  G  F  E  E  V  L  S  R  Y  R  E  I  V  P  Q  L  K  L  A   : G  P  T  S  F  A  P  V  I  E  M  A  M  T  I  V  E  Q  S  G  G  Q  Y  H  V  L  L  I  I  A  D  G  Q  :  V  T  R  S  V  D  T  G  R  G  Q  L  S  P  Q  E  Q  K  T  V  D  A  I  V  Q  A  S :   K  F  P  L  S  I  I  L  V  G  V  G  D  G  P  W  D  M  M  K  E  F  D  D  N  I  P  A  R  D  F  D  N  F  Q  :  F  V  N  F  T  D  I  M  A  K  N  V  P  Q  S  R  K  E  T  E  F  A  L  S  A  L  M  E  I  P  S  Q  Y  K  A  T  M  E  L  N  L  L  G :   G  Q  S  G  K  S  V  N  R  V  A  L  P  P  P  M  Y  G  A  S  S  V  G  G  S  K  T  S  H  A  P  S  F  Q  Q  P  A  S  S  Y  Y  G  Y  G  S  P  A  D  A  E  P  H  F  Q  P  T  S  S  S  Y  Y  D  S  A  R  P  V  D  N  A  P  S  A  P  S  S  P  Y  T  A  P  S  S  T  Y  D  N  Q  :  V  C  P  I  C  L  T  N  P  K  D  M  A  F  G  C  G  H  Q  :  T  C  C  E  C  G  R  A  L  E  N  C  P  I  C  R  S  S  I  Q  T  R  I  K  L  Y  *  A  A  C  F  A  L  I  P  F  A  I  P  T  C  N  A  F  *  S  V  W  M  *  N  H  G  D  E  A  D  F  F  I  C  W  I  W  L  W  P  C  A  N  A  N  F  L  L  Y  M  A  W  F  L  F  V  F  C  F  C  Q  I  T  L  L  P  T  I  E  A  *  D  P  *  I  Q  I  V  C  K  S  T  V  Y  C  A  V  T  F  K  E  S  C  A  D  T  R  P  N  T  L  P  F  V  N   </first_frame>
            <second_frame>  K  N  P  T  F  S  S  V  T  *  R  R  N  F  H  V  S  T  Q  N  F  *  L  T  Y  C  F  N  Y  I  E  K  K  K  V  Y  S  L  S  D  T  A  I  F  F  Q  T  D  S  I  R  S  T  I  R  I  Q  *  S  Q  V  F  K  P  H  N  S  N  C  C  T  S  S  V  F  K  :  I  S  *  L  *  W  V  A  R  V  Q  E  R  I  V  G  G  K  L  H  R  L  D  L  P  L  G  I  N  T  I  I  L  K  L  L  I  L  K  I  V  T  V  T  H  S  R  R  L  F  L  L  M  H  H  H  H  H  P  N  R  I  I  P  H  S  T  N  T  I  I  L  H  N  P  N  R  I  M  L  L  M  N  M  N  L  G  L  I  L  M  L  H  D  Q  G  L  I  G  D  T  R  G  L  Q  T  I  I  I  P  W  M  R :   *  L  K  P  L  H  E  L  V  W  S  L  R  I  L  L  W  V  L  I  S  P  R  V  M  N  G  Q  :  V  R  G  L  L  V  I  G  V  Y  I  T  L  G  R  I  *  T  H  M  S  K  P  F  P  *  L  E  K  P  *  R  H  L  M  R  I  T  *  F  L  V  L  D  S  E  M  :  H  Q  L  M  I  K  M  Y  S  V  S  F  P  M  K  D  F  V  M  V  L  R  K  F  C  L  V  T  E  K  L  S  P  S  *  S  L  Q  :  D  Q  H  H  S  P  R  S  L  K  W  P  *  Q  *  L  S  R  V  E  A  S  T  M  F  Y  *  S  L  Q  M  G  R :   *  L  E  V  L  I  L  A  V  D  N  *  V  R  R  S  R  K  R  W  M  Q  S  Y  K  Q   : A  S  F  P  C  Q  L  Y  W  L  G  L  A  M  D  R  G  I  *  *  R  N  L  M  I  I  F  L  L  G  T  S  I  I  S  S :   S  S  I  S  R  T  *  W  P  K  M  C  L  N  L  E  R  R  R  S  L  R  F  Q  H  *  W  K  S  L  H  N  T  K  R  R  W  N  L  T  Y  W   : V  D  K  V  E  N  L  S  I  G  *  L  F  L  L  L  C  M  G  Q  V  L  S  V  V  Q  R  P  H  M  H  Q  V  F  S  S  L  Q  A  R  I  M  V  M  E  A  L  Q  M  Q  N  H  I  F  S  R  L  Q  V  L  T  T  T  V  L  A  Q  L  T  M  L  H  L  L  R  V  R  P  T  L  L  P  V  L  P  M  T  I  R :   F  A  P  F  V  L  L  T  Q  K  T  W  P  L  A  V  G  I  R :   H  V  V  S  V  G  E  R  L  R  I  A  Q  Y  V  E  V  Q  F  K  P  E  *  S  S  I  E  L  L  V  L  P  *  F  L  L  L  F  Q  P  A  M  L  F  D  Q  F  G  C  E  T  M  V  M  K  L  I  F  L  F  V  G  Y  G  F  G  L  V  L  M  Q  I  S  F  C  T  W  L  G  S  C  L  C  F  A  F  A  K  L  L  Y  F  Q  L  *  K  H  K  I  P  R  F  K  L  S  V  N  Q  L  F  I  V  Q  *  P  L  K  S  L  V  L  I  L  D  L  I  H  C  H  L  S  I  </second_frame>
            <third_frame>   K  T  Q  L  F  H  P  *  P  N  D  E  T  S  M  C  L  H  K  T  F  N  S  H  T  V  L  I  I  *  K  K  K  K  C  I  P  F  L  I  L  Q  F  F  F  K  Q  I  R  F  D  P  P  L  E  S  N  N  H  K  F  L  N  P  T  T  P  I  A  A  H  P  L  F  L  R :   *  V  D  F  D  G  W  Q  E  F  K  R  G  *  L  E  A  S  F  I  D  S  I  F  L  L  E  S  I  R  L  S  S  N  C  L  S  S  R  *  L  Q  L  L  T  A  D  G  C  S  F  L  C  T  T  T  T  I  P  T  E  L  S  P  T  A  P  T  Q  L  F  F  T  T  P  T  E  L  C  F  S  *  T  *  I  S  D  S  Y  S  C  S  T  T  K  A  *  S  E  I  L  E  D  C  R  Q  L  *  F  P  G  *   : G  D  *  S  P  C  T  S  W  F  G  V  F  E  S  Y  C  G  Y  *  F  H  Q  E  *  *  M  D  R :   *  E  V  F  *  *  S  E  S  T  S  H  W  A  E  F  E  P  I  *  A  S  H  F  H  N  W  K  N  L  S  G  I  *  *  G  *  L  D  S  L  F  W  I  R  R  C :   I  N  S  *  S  R  C  I  Q  F  L  S  Q  *  K  I  L  *  W  F  *  G  S  S  V  S  L  Q  R  N  C  P  P  A  E  A  C  R :   T  N  I  I  R  P  G  H  *  N  G  H  D  N  S  *  A  E  W  R  P  V  P  C  S  I  N  H  C  R  W  A   : G  N  *  K  C  *  Y  W  P  W  T  I  K  S  A  G  A  E  N  G  G  C  N  R  T  S  K  :  Q  V  S  L  V  N  Y  T  G  W  G  W  R  W  T  V  G  Y  D  E  G  I  *  *  *  Y  S  C  *  G  L  R  *  F  P   : V  R  Q  F  H  G  H  N  G  Q  K  C  A  S  I  S  K  G  D  G  V  C  A  F  S  I  D  G  N  P  F  T  I  Q  S  D  D  G  T  *  L  T  G  :  W  T  K  W  K  I  C  Q  *  G  S  S  S  S  S  Y  V  W  G  K  F  C  R  W  F  K  D  L  T  C  T  K  F  S  A  A  C  K  L  V  L  W  L  W  K  P  C  R  C  R  T  T  F  S  A  D  F  K  F  L  L  R  Q  C  S  P  S  *  Q  C  S  I  C  S  E  F  A  L  H  C  S  Q  F  Y  L  *  Q  S   : G  L  P  H  L  S  Y  *  P  K  R  H  G  L  W  L  W  A  S   : D  M  L  *  V  W  E  S  A  *  E  L  P  N  M  S  K  F  N  S  N  Q  N  K  A  L  L  S  C  L  F  C  P  D  S  F  C  Y  S  N  L  Q  C  F  L  I  S  L  D  V  K  P  W  *  *  S  *  F  F  Y  L  L  D  M  A  L  A  L  C  *  C  K  F  P  S  V  H  G  L  V  L  V  C  V  L  L  L  P  N  Y  F  T  S  N  Y  R  S  I  R  S  L  D  S  N  C  L  *  I  N  C  L  L  C  S  D  L  *  R  V  L  C  *  Y  *  T  *  Y  I  A  I  C  Q  Y </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0034H10.2" strand="-"/>
                <serials PGL_serial="5" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="28179" stop="27295"/>
                    <exon start="26430" stop="26346"/>
                    <exon start="26258" stop="26118"/>
                    <exon start="26018" stop="25905"/>
                    <exon start="25819" stop="25722"/>
                    <exon start="25532" stop="25453"/>
                    <exon start="25328" stop="25223"/>
                    <exon start="25129" stop="25002"/>
                    <exon start="24882" stop="24618"/>
                    <exon start="24492" stop="24436"/>
                    <exon start="24343" stop="24263"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1491</number_coding_nucleotides>
                  <number_encoded_amino_acids>497</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DKLTLMGGKSSREDSWRQASSTRSSSWNQYDYPQTAYPQDSYSYSQQTAVPSYAPPPPSQQNYPPQHQHNYSSQPQQNYASHEHESRTHTHAPRPRLDRRYSRIADNYNSLDEVTEALARAGLESSNLIVGIDFTKSNEWTGKRSFSNRSLHHIGQNLNPYEQAISIIGKTLAAFDEDNLIPCFGFGDASTHDQDVFSFFPNERFCNGFEEVLSRYREIVPQLKLAGPTSFAPVIEMAMTIVEQSGGQYHVLLIIADGQVTRSVDTGRGQLSPQEQKTVDAIVQASKFPLSIILVGVGDGPWDMMKEFDDNIPARDFDNFQFVNFTDIMAKNVPQSRKETEFALSALMEIPSQYKATMELNLLGGQSGKSVNRVALPPPMYGASSVGGSKTSHAPSFQQPASSYYGYGSPADAEPHFQPTSSSYYDSARPVDNAPSAPSSPYTAPSSTYDNQVCPICLTNPKDMAFGCGHQTCCECGRALENCPICRSSIQTRIKLY*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="-" PGL_start="35744" PGL_stop="32908"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="35744" e_stop="35476"/>
            <exon e_start="34838" e_stop="34741"/>
            <exon e_start="34630" e_stop="34322"/>
            <exon e_start="33362" e_stop="33314"/>
            <exon e_start="33163" e_stop="32908"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.997" acc_prob="0.998" e_score="0.996"/>
          <exon-intron don_prob="0.951" acc_prob="0.964" e_score="1.000"/>
          <exon-intron don_prob="0.925" acc_prob="0.959" e_score="0.997"/>
          <exon-intron don_prob="0.875" acc_prob="0.998" e_score="0.980"/>
          <exon-only e_score="0.918"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.996">
            <gDNA_exon_boundary e_start="35744" e_stop="35476" e_length="269"/>
          </exon>
          <intron i_serial="1" don_prob="0.997" acc_prob="0.998">
            <gDNA_intron_boundary i_start="35475" i_stop="34839" i_length="637"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="34838" e_stop="34741" e_length="98"/>
          </exon>
          <intron i_serial="2" don_prob="0.951" acc_prob="0.964">
            <gDNA_intron_boundary i_start="34740" i_stop="34631" i_length="110"/>
          </intron>
          <exon e_serial="3" e_score="0.997">
            <gDNA_exon_boundary e_start="34630" e_stop="34322" e_length="309"/>
          </exon>
          <intron i_serial="3" don_prob="0.925" acc_prob="0.959">
            <gDNA_intron_boundary i_start="34321" i_stop="33363" i_length="959"/>
          </intron>
          <exon e_serial="4" e_score="0.980">
            <gDNA_exon_boundary e_start="33362" e_stop="33314" e_length="49"/>
          </exon>
          <intron i_serial="4" don_prob="0.875" acc_prob="0.998">
            <gDNA_intron_boundary i_start="33313" i_stop="33164" i_length="150"/>
          </intron>
          <exon e_serial="5" e_score="0.918">
            <gDNA_exon_boundary e_start="33163" e_stop="32908" e_length="256"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="35744" stop="35476"/>
              <exon start="34838" stop="34741"/>
              <exon start="34630" stop="34322"/>
              <exon start="33362" stop="33314"/>
              <exon start="33163" stop="32908"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U564941" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GCGAAGAAAGCTATGGGGAAGAAAGCAAGTGGAGTAGGAGAAGGAGGAGATGGATCCACTGGAAAAGAAGGTTACAAGCTTCTGGGCAATCCGACTTTCAAAAAATTGGAGAATGGCCGCTTCAAATGCGTTCAAACAGGGCATGAGCTGCCGGAACACGCTAGGGACTCTTATGCCCACAGCAAGCACTGCCGCTTGGGTCTAATTGATGCTGCACTTTCTAAGAATAAACCTCCTCTCAATATGTTTAACCAAGATCCTCTCAATCG : GTCAAAGTTGATATGTAAATTAACAGGAGATACAGTTAATAAGTCAGAGGAGCATATATGGAAACACATGAGTGGAAAGCGCTTTCTCAGAATGTTAG : AGAAAAAGGAAACTGAAACTGAAATGGAAAATGGAGGGCTAGAAAAGCAAGTAGAAAATGAAGCGGCTAAGAAGACGGACAGCAAAGCCAATCGTCGGGACAAAAAGAAAAACAAAAAGAAAGAAATAGAAGATGCTAGCAAGGTTATATCTGAAATAAGGGATTCTTCTGGAAAGAACAGTGGCTCTGAAGATGATGATGAGTTTTGGATGCCTCCAGTTGGTGCTCGCTGGGACAATGATGATGGAGGTGATCGATGGGGATCTGGTTCGGAATCAGAAGAAGAAGAAGAAGATGCTATTGGGCAAG : ATGGAGGAACTGAAGAGGAAAATCATGACACCGGAGAGCTTTCCAAGCG : GGCAAAACGCATGTCCCTTGAGATTGGACCCAGTAGCTTTGCCTCAAGGAAGAAAAAGAAGAAGACCAGTGCTACATGATATTTTTCCTCTGAAAAAGCATTACAAATTTTGTTATCATCTTGGGTTTAGTTGTATACTGCTTGCTTCATTTTAGCTTTTCTTTATTTTCCTTACTATTGTGTTACTGTAGGAAGAAATTTCTTACAGTTAGAGCGTCAACACATGTATTGATTAATTTTCGGACTATTATGTTGA</gDNA_template>
            <first_frame> A  K  K  A  M  G  K  K  A  S  G  V  G  E  G  G  D  G  S  T  G  K  E  G  Y  K  L  L  G  N  P  T  F  K  K  L  E  N  G  R  F  K  C  V  Q  T  G  H  E  L  P  E  H  A  R  D  S  Y  A  H  S  K  H  C  R  L  G  L  I  D  A  A  L  S  K  N  K  P  P  L  N  M  F  N  Q  D  P  L  N  R :   S  K  L  I  C  K  L  T  G  D  T  V  N  K  S  E  E  H  I  W  K  H  M  S  G  K  R  F  L  R  M  L   : E  K  K  E  T  E  T  E  M  E  N  G  G  L  E  K  Q  V  E  N  E  A  A  K  K  T  D  S  K  A  N  R  R  D  K  K  K  N  K  K  K  E  I  E  D  A  S  K  V  I  S  E  I  R  D  S  S  G  K  N  S  G  S  E  D  D  D  E  F  W  M  P  P  V  G  A  R  W  D  N  D  D  G  G  D  R  W  G  S  G  S  E  S  E  E  E  E  E  D  A  I  G  Q   : D  G  G  T  E  E  E  N  H  D  T  G  E  L  S  K  R :   A  K  R  M  S  L  E  I  G  P  S  S  F  A  S  R  K  K  K  K  K  T  S  A  T  *  Y  F  S  S  E  K  A  L  Q  I  L  L  S  S  W  V  *  L  Y  T  A  C  F  I  L  A  F  L  Y  F  P  Y  Y  C  V  T  V  G  R  N  F  L  Q  L  E  R  Q  H  M  Y  *  L  I  F  G  L  L  C  * </first_frame>
            <second_frame>  R  R  K  L  W  G  R  K  Q  V  E  *  E  K  E  E  M  D  P  L  E  K  K  V  T  S  F  W  A  I  R  L  S  K  N  W  R  M  A  A  S  N  A  F  K  Q  G  M  S  C  R  N  T  L  G  T  L  M  P  T  A  S  T  A  A  W  V  *  L  M  L  H  F  L  R  I  N  L  L  S  I  C  L  T  K  I  L  S  I   : G  Q  S  *  Y  V  N  *  Q  E  I  Q  L  I  S  Q  R  S  I  Y  G  N  T  *  V  E  S  A  F  S  E  C  *  :  R  K  R  K  L  K  L  K  W  K  M  E  G  *  K  S  K  *  K  M  K  R  L  R  R  R  T  A  K  P  I  V  G  T  K  R  K  T  K  R  K  K  *  K  M  L  A  R  L  Y  L  K  *  G  I  L  L  E  R  T  V  A  L  K  M  M  M  S  F  G  C  L  Q  L  V  L  A  G  T  M  M  M  E  V  I  D  G  D  L  V  R  N  Q  K  K  K  K  K  M  L  L  G  K  :  M  E  E  L  K  R  K  I  M  T  P  E  S  F  P  S   : G  Q  N  A  C  P  L  R  L  D  P  V  A  L  P  Q  G  R  K  R  R  R  P  V  L  H  D  I  F  P  L  K  K  H  Y  K  F  C  Y  H  L  G  F  S  C  I  L  L  A  S  F  *  L  F  F  I  F  L  T  I  V  L  L  *  E  E  I  S  Y  S  *  S  V  N  T  C  I  D  *  F  S  D  Y  Y  V   </second_frame>
            <third_frame>   E  E  S  Y  G  E  E  S  K  W  S  R  R  R  R  R  W  I  H  W  K  R  R  L  Q  A  S  G  Q  S  D  F  Q  K  I  G  E  W  P  L  Q  M  R  S  N  R  A  *  A  A  G  T  R  *  G  L  L  C  P  Q  Q  A  L  P  L  G  S  N  *  C  C  T  F  *  E  *  T  S  S  Q  Y  V  *  P  R  S  S  Q  S  :  V  K  V  D  M  *  I  N  R  R  Y  S  *  *  V  R  G  A  Y  M  E  T  H  E  W  K  A  L  S  Q  N  V  R :   E  K  G  N  *  N  *  N  G  K  W  R  A  R  K  A  S  R  K  *  S  G  *  E  D  G  Q  Q  S  Q  S  S  G  Q  K  E  K  Q  K  E  R  N  R  R  C  *  Q  G  Y  I  *  N  K  G  F  F  W  K  E  Q  W  L  *  R  *  *  *  V  L  D  A  S  S  W  C  S  L  G  Q  *  *  W  R  *  S  M  G  I  W  F  G  I  R  R  R  R  R  R  C  Y  W  A  R :   W  R  N  *  R  G  K  S  *  H  R  R  A  F  Q  A  :  G  K  T  H  V  P  *  D  W  T  Q  *  L  C  L  K  E  E  K  E  E  D  Q  C  Y  M  I  F  F  L  *  K  S  I  T  N  F  V  I  I  L  G  L  V  V  Y  C  L  L  H  F  S  F  S  L  F  S  L  L  L  C  Y  C  R  K  K  F  L  T  V  R  A  S  T  H  V  L  I  N  F  R  T  I  M  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0034H10.2" strand="-"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="35744" stop="35476"/>
                    <exon start="34838" stop="34741"/>
                    <exon start="34630" stop="34322"/>
                    <exon start="33362" stop="33314"/>
                    <exon start="33163" stop="33085"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>801</number_coding_nucleotides>
                  <number_encoded_amino_acids>267</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>AKKAMGKKASGVGEGGDGSTGKEGYKLLGNPTFKKLENGRFKCVQTGHELPEHARDSYAHSKHCRLGLIDAALSKNKPPLNMFNQDPLNRSKLICKLTGDTVNKSEEHIWKHMSGKRFLRMLEKKETETEMENGGLEKQVENEAAKKTDSKANRRDKKKNKKKEIEDASKVISEIRDSSGKNSGSEDDDEFWMPPVGARWDNDDGGDRWGSGSESEEEEEDAIGQDGGTEEENHDTGELSKRAKRMSLEIGPSSFASRKKKKKTSAT*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="+" PGL_start="38872" PGL_stop="39424"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="38872" e_stop="39014"/>
            <exon e_start="39134" e_stop="39424"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.971" e_score="0.986"/>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.986">
            <gDNA_exon_boundary e_start="38872" e_stop="39014" e_length="143"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.971">
            <gDNA_intron_boundary i_start="39015" i_stop="39133" i_length="119"/>
          </intron>
          <exon e_serial="2" e_score="0.997">
            <gDNA_exon_boundary e_start="39134" e_stop="39424" e_length="291"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="38872" stop="39014"/>
              <exon start="39134" stop="39424"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U590635" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ACATAATGAATTGGCCTTAGAGTTCAATAGACAGCTGAAAGCCAGGATAAGAACATTGAGAGCAGAGCTTGAGCATGCTGCTATAACATATGTAGATGTCTATGCTGCCAAGTATGAACTGATCAGCAATGCCAAGAGCCAAG : ATTTCATGGAACCCCAGAAAATATGCTGTGGGTTACACGAGGGGAACAGACATGTATGGTGTGGTCAGAAAGGAATAGTGAGAGGTGCAGAAGTTTTTGGAGGAGCTTGTGTCAACCCTTCAGATTATATAAGCTGGGATGGAATACATTACTCACAAGCTGCTAATCAATGGATTGCAAATCACATACTAAATGGCAATTTCTCTGATCCTCCCATTCCCATCACTCATGCTTGTCATAAACATCTTCACTATTAGGAATCTTGTATTATAAACATGCATCTTAACTAGC</gDNA_template>
            <first_frame> T  *  *  I  G  L  R  V  Q  *  T  A  E  S  Q  D  K  N  I  E  S  R  A  *  A  C  C  Y  N  I  C  R  C  L  C  C  Q  V  *  T  D  Q  Q  C  Q  E  P  R :   F  H  G  T  P  E  N  M  L  W  V  T  R  G  E  Q  T  C  M  V  W  S  E  R  N  S  E  R  C  R  S  F  W  R  S  L  C  Q  P  F  R  L  Y  K  L  G  W  N  T  L  L  T  S  C  *  S  M  D  C  K  S  H  T  K  W  Q  F  L  *  S  S  H  S  H  H  S  C  L  S  *  T  S  S  L  L  G  I  L  Y  Y  K  H  A  S  *  L   </first_frame>
            <second_frame>  H  N  E  L  A  L  E  F  N  R  Q  L  K  A  R  I  R  T  L  R  A  E  L  E  H  A  A  I  T  Y  V  D  V  Y  A  A  K  Y  E  L  I  S  N  A  K  S  Q   : D  F  M  E  P  Q  K  I  C  C  G  L  H  E  G  N  R  H  V  W  C  G  Q  K  G  I  V  R  G  A  E  V  F  G  G  A  C  V  N  P  S  D  Y  I  S  W  D  G  I  H  Y  S  Q  A  A  N  Q  W  I  A  N  H  I  L  N  G  N  F  S  D  P  P  I  P  I  T  H  A  C  H  K  H  L  H  Y  *  E  S  C  I  I  N  M  H  L  N  *  </second_frame>
            <third_frame>   I  M  N  W  P  *  S  S  I  D  S  *  K  P  G  *  E  H  *  E  Q  S  L  S  M  L  L  *  H  M  *  M  S  M  L  P  S  M  N  *  S  A  M  P  R  A  K  :  I  S  W  N  P  R  K  Y  A  V  G  Y  T  R  G  T  D  M  Y  G  V  V  R  K  E  *  *  E  V  Q  K  F  L  E  E  L  V  S  T  L  Q  I  I  *  A  G  M  E  Y  I  T  H  K  L  L  I  N  G  L  Q  I  T  Y  *  M  A  I  S  L  I  L  P  F  P  S  L  M  L  V  I  N  I  F  T  I  R  N  L  V  L  *  T  C  I  L  T  S </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0034H10.2" strand="+"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="38873" stop="39014"/>
                    <exon start="39134" stop="39390"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>396</number_coding_nucleotides>
                  <number_encoded_amino_acids>132</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>HNELALEFNRQLKARIRTLRAELEHAAITYVDVYAAKYELISNAKSQDFMEPQKICCGLHEGNRHVWCGQKGIVRGAEVFGGACVNPSDYISWDGIHYSQAANQWIANHILNGNFSDPPIPITHACHKHLHY*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="-" PGL_start="46771" PGL_stop="45539"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="46771" e_stop="45539"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.942"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.942">
            <gDNA_exon_boundary e_start="46771" e_stop="45539" e_length="1233"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46771" stop="45539"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U586538" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CAGAGTCTATGATACGCCGAAAGCGTAATAGACCAATTGATTCCAAATATAAAATTCCTTAAAGAAGGAAGGAGCAAATGATCAATATGGTCATGATAATGAGGCAAGTGCTATAAAAGAGCACATTGACATAACACTTCATAAAATCTTGAAAAAGGTTCAGGTACCTGAAATAATGAAAAATGAAGAGATCTCGATAAGTTATGTCTTGTTGGAATCGATATCAAATAACCGTCGACAGTATCTTTGATATGAGGTAGCGCTCAATGATATAAATTGTGATGAGGATCTTGAATTCAAATCTGTCATATAGTGTGAACAGATAAATGGTTGGCCAAGTAAAATGCACAATTCAAGTATATTTTGTTTCACTTAGAAAAGTGATATTTTGGACTTGTAGTCCATAAATCAAGGTATAATGTCAGTGGGGTACAAATAAATTATTATGCGATAGTATAACCATAAGATATCAAATATGGTTTGTGCCTTGGGGCATAAAGGTTTATCGCAAAAATCCTGACATTATTGGAGATGTTTTCTCCTTTGATGGATGCAATGAGGTTTGTTTTGATCTGACAACATATGAAAACTTGAATGCATGTAAATGAATAATTGTAATGTCTAGCTAGACAATGAAGGTTATATGAAAATTCTTGAAACAATCGAGGTGTCTGAAGCATATAAGAGTTTGAAAGAAACTTTTCCAATAAAGCTTCAAGAATCCTTATATGGATTGAAATAGTCAAGGAAGAAAAAGGGTACAAGAGAATGACCCTAATTTTCCTTGTATTTTTATGAAAAGGTCTTGGTAAGACAAAATTTTGTCTAGACCTACAGATTGTTAATTTGACAAATAAAATATTTGTCTAGCAGTGCACATACACTGAAAAATTTTGATGCAATTTTATGTGGATATATCGCATTCATTGAGTACCCCAATGATTATGAGATCACTTGACATAAATGATGATTCAGTTTGATCTCAAAAGAAGGATGAAGAGTTTCTTAGTGATGAAACTCTATCTTGGTGCAATCAGGGCACTAGTGCATCTTACTAACAATATTTGACCAGATATTTGTTTTGCAGTAAATTTACTGGCAAGATTCAGTTTCTCCCCGATAAAGGACATTGAAATGGTGTTGAACACATGATTGAATATCCTCATAGGACCATAGTTATGGGCTTATTCTATTCCGAGGAATCCAAAACAAAATTGATTGGTTACGCAGATG</gDNA_template>
            <first_frame> Q  S  L  *  Y  A  E  S  V  I  D  Q  L  I  P  N  I  K  F  L  K  E  G  R  S  K  *  S  I  W  S  *  *  *  G  K  C  Y  K  R  A  H  *  H  N  T  S  *  N  L  E  K  G  S  G  T  *  N  N  E  K  *  R  D  L  D  K  L  C  L  V  G  I  D  I  K  *  P  S  T  V  S  L  I  *  G  S  A  Q  *  Y  K  L  *  *  G  S  *  I  Q  I  C  H  I  V  *  T  D  K  W  L  A  K  *  N  A  Q  F  K  Y  I  L  F  H  L  E  K  *  Y  F  G  L  V  V  H  K  S  R  Y  N  V  S  G  V  Q  I  N  Y  Y  A  I  V  *  P  *  D  I  K  Y  G  L  C  L  G  A  *  R  F  I  A  K  I  L  T  L  L  E  M  F  S  P  L  M  D  A  M  R  F  V  L  I  *  Q  H  M  K  T  *  M  H  V  N  E  *  L  *  C  L  A  R  Q  *  R  L  Y  E  N  S  *  N  N  R  G  V  *  S  I  *  E  F  E  R  N  F  S  N  K  A  S  R  I  L  I  W  I  E  I  V  K  E  E  K  G  Y  K  R  M  T  L  I  F  L  V  F  L  *  K  G  L  G  K  T  K  F  C  L  D  L  Q  I  V  N  L  T  N  K  I  F  V  *  Q  C  T  Y  T  E  K  F  *  C  N  F  M  W  I  Y  R  I  H  *  V  P  Q  *  L  *  D  H  L  T  *  M  M  I  Q  F  D  L  K  R  R  M  K  S  F  L  V  M  K  L  Y  L  G  A  I  R  A  L  V  H  L  T  N  N  I  *  P  D  I  C  F  A  V  N  L  L  A  R  F  S  F  S  P  I  K  D  I  E  M  V  L  N  T  *  L  N  I  L  I  G  P  *  L  W  A  Y  S  I  P  R  N  P  K  Q  N  *  L  V  T  Q  M </first_frame>
            <second_frame>  R  V  Y  D  T  P  K  A  *  *  T  N  *  F  Q  I  *  N  S  L  K  K  E  G  A  N  D  Q  Y  G  H  D  N  E  A  S  A  I  K  E  H  I  D  I  T  L  H  K  I  L  K  K  V  Q  V  P  E  I  M  K  N  E  E  I  S  I  S  Y  V  L  L  E  S  I  S  N  N  R  R  Q  Y  L  *  Y  E  V  A  L  N  D  I  N  C  D  E  D  L  E  F  K  S  V  I  *  C  E  Q  I  N  G  W  P  S  K  M  H  N  S  S  I  F  C  F  T  *  K  S  D  I  L  D  L  *  S  I  N  Q  G  I  M  S  V  G  Y  K  *  I  I  M  R  *  Y  N  H  K  I  S  N  M  V  C  A  L  G  H  K  G  L  S  Q  K  S  *  H  Y  W  R  C  F  L  L  *  W  M  Q  *  G  L  F  *  S  D  N  I  *  K  L  E  C  M  *  M  N  N  C  N  V  *  L  D  N  E  G  Y  M  K  I  L  E  T  I  E  V  S  E  A  Y  K  S  L  K  E  T  F  P  I  K  L  Q  E  S  L  Y  G  L  K  *  S  R  K  K  K  G  T  R  E  *  P  *  F  S  L  Y  F  Y  E  K  V  L  V  R  Q  N  F  V  *  T  Y  R  L  L  I  *  Q  I  K  Y  L  S  S  S  A  H  T  L  K  N  F  D  A  I  L  C  G  Y  I  A  F  I  E  Y  P  N  D  Y  E  I  T  *  H  K  *  *  F  S  L  I  S  K  E  G  *  R  V  S  *  *  *  N  S  I  L  V  Q  S  G  H  *  C  I  L  L  T  I  F  D  Q  I  F  V  L  Q  *  I  Y  W  Q  D  S  V  S  P  R  *  R  T  L  K  W  C  *  T  H  D  *  I  S  S  *  D  H  S  Y  G  L  I  L  F  R  G  I  Q  N  K  I  D  W  L  R  R   </second_frame>
            <third_frame>   E  S  M  I  R  R  K  R  N  R  P  I  D  S  K  Y  K  I  P  *  R  R  K  E  Q  M  I  N  M  V  M  I  M  R  Q  V  L  *  K  S  T  L  T  *  H  F  I  K  S  *  K  R  F  R  Y  L  K  *  *  K  M  K  R  S  R  *  V  M  S  C  W  N  R  Y  Q  I  T  V  D  S  I  F  D  M  R  *  R  S  M  I  *  I  V  M  R  I  L  N  S  N  L  S  Y  S  V  N  R  *  M  V  G  Q  V  K  C  T  I  Q  V  Y  F  V  S  L  R  K  V  I  F  W  T  C  S  P  *  I  K  V  *  C  Q  W  G  T  N  K  L  L  C  D  S  I  T  I  R  Y  Q  I  W  F  V  P  W  G  I  K  V  Y  R  K  N  P  D  I  I  G  D  V  F  S  F  D  G  C  N  E  V  C  F  D  L  T  T  Y  E  N  L  N  A  C  K  *  I  I  V  M  S  S  *  T  M  K  V  I  *  K  F  L  K  Q  S  R  C  L  K  H  I  R  V  *  K  K  L  F  Q  *  S  F  K  N  P  Y  M  D  *  N  S  Q  G  R  K  R  V  Q  E  N  D  P  N  F  P  C  I  F  M  K  R  S  W  *  D  K  I  L  S  R  P  T  D  C  *  F  D  K  *  N  I  C  L  A  V  H  I  H  *  K  I  L  M  Q  F  Y  V  D  I  S  H  S  L  S  T  P  M  I  M  R  S  L  D  I  N  D  D  S  V  *  S  Q  K  K  D  E  E  F  L  S  D  E  T  L  S  W  C  N  Q  G  T  S  A  S  Y  *  Q  Y  L  T  R  Y  L  F  C  S  K  F  T  G  K  I  Q  F  L  P  D  K  G  H  *  N  G  V  E  H  M  I  E  Y  P  H  R  T  I  V  M  G  L  F  Y  S  E  E  S  K  T  K  L  I  G  Y  A  D  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0034H10.2" strand="-"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="46719" stop="46522"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>195</number_coding_nucleotides>
                  <number_encoded_amino_acids>65</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NSLKKEGANDQYGHDNEASAIKEHIDITLHKILKKVQVPEIMKNEEISISYVLLESISNNRRQYL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="-" PGL_start="47812" PGL_stop="47413"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="47812" e_stop="47413"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.923"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.923">
            <gDNA_exon_boundary e_start="47812" e_stop="47413" e_length="400"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47812" stop="47413"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U567070" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTTTATAACACGTTATCAGCACGAGTCTCTAGCCAATTAAGATTGAGTTTTACTTTTTCTTTAACTCATGTTTTGGTTGATTTCGTTATGAAGATCAAAGTATTGTATGCATAAAATCAGGTATGTATTTTCTAAAATATTTTATGATTTAGAATAAAATAGTGTTCAGTCACTAACAATTATCAGGAACCGAAGACATATACTACTATTGGTTGAATATGACATGCTATACAAAATTTCTTAAATAGAAAAAGGTGTAAGATTTTAATAGCATGAATTTGAATGTTATTTTGATTGTTTTGAAAGACTCAAAGGATAAATCATGTTGTACTTCGGTTTATTATACCGTTGGTTAAGGGTAAGACGATGGATTCAAGTTTCATCGCACCAAAAGGGTAAG</gDNA_template>
            <first_frame> F  Y  N  T  L  S  A  R  V  S  S  Q  L  R  L  S  F  T  F  S  L  T  H  V  L  V  D  F  V  M  K  I  K  V  L  Y  A  *  N  Q  V  C  I  F  *  N  I  L  *  F  R  I  K  *  C  S  V  T  N  N  Y  Q  E  P  K  T  Y  T  T  I  G  *  I  *  H  A  I  Q  N  F  L  N  R  K  R  C  K  I  L  I  A  *  I  *  M  L  F  *  L  F  *  K  T  Q  R  I  N  H  V  V  L  R  F  I  I  P  L  V  K  G  K  T  M  D  S  S  F  I  A  P  K  G  *  </first_frame>
            <second_frame>  F  I  T  R  Y  Q  H  E  S  L  A  N  *  D  *  V  L  L  F  L  *  L  M  F  W  L  I  S  L  *  R  S  K  Y  C  M  H  K  I  R  Y  V  F  S  K  I  F  Y  D  L  E  *  N  S  V  Q  S  L  T  I  I  R  N  R  R  H  I  L  L  L  V  E  Y  D  M  L  Y  K  I  S  *  I  E  K  G  V  R  F  *  *  H  E  F  E  C  Y  F  D  C  F  E  R  L  K  G  *  I  M  L  Y  F  G  L  L  Y  R  W  L  R  V  R  R  W  I  Q  V  S  S  H  Q  K  G  K </second_frame>
            <third_frame>   L  *  H  V  I  S  T  S  L  *  P  I  K  I  E  F  Y  F  F  F  N  S  C  F  G  *  F  R  Y  E  D  Q  S  I  V  C  I  K  S  G  M  Y  F  L  K  Y  F  M  I  *  N  K  I  V  F  S  H  *  Q  L  S  G  T  E  D  I  Y  Y  Y  W  L  N  M  T  C  Y  T  K  F  L  K  *  K  K  V  *  D  F  N  S  M  N  L  N  V  I  L  I  V  L  K  D  S  K  D  K  S  C  C  T  S  V  Y  Y  T  V  G  *  G  *  D  D  G  F  K  F  H  R  T  K  R  V   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02SLe0034H10.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="+" PGL_start="49986" PGL_stop="51126"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="49986" e_stop="49995"/>
            <exon e_start="50161" e_stop="50268"/>
            <exon e_start="50367" e_stop="50481"/>
            <exon e_start="50734" e_stop="50886"/>
            <exon e_start="51084" e_stop="51126"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.684" e_score="1.000"/>
          <exon-intron don_prob="0.831" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.908" e_score="1.000"/>
          <exon-intron don_prob="0.927" acc_prob="0.993" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="49986" e_stop="49995" e_length="10"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.684">
            <gDNA_intron_boundary i_start="49996" i_stop="50160" i_length="165"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="50161" e_stop="50268" e_length="108"/>
          </exon>
          <intron i_serial="2" don_prob="0.831" acc_prob="0.000">
            <gDNA_intron_boundary i_start="50269" i_stop="50366" i_length="98"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="50367" e_stop="50481" e_length="115"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="0.908">
            <gDNA_intron_boundary i_start="50482" i_stop="50733" i_length="252"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="50734" e_stop="50886" e_length="153"/>
          </exon>
          <intron i_serial="4" don_prob="0.927" acc_prob="0.993">
            <gDNA_intron_boundary i_start="50887" i_stop="51083" i_length="197"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="51084" e_stop="51126" e_length="43"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49986" stop="49995"/>
              <exon start="50161" stop="50268"/>
              <exon start="50367" stop="50481"/>
              <exon start="50734" stop="50886"/>
              <exon start="51084" stop="51126"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U603695" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GCCCCTTCAG : GGTTGACTATAATGCAATACTTTTGTGGATCACTGAAGTCAACTGTTTGCGGCTTCTCCTTTTTGTGATTCTGAAATCTCCGAGGAGAATGGGTTCACCTACGCGCAG : CAGCTCTAACACTAGAAGAGGAAATGAAATGATGAGGCTTCTTGTGACAACCATTGTCGGAGTTGTGATTGGTATTTTCTTAGGCGTGTCGTTTCCTACTCTTTCATTGACCAAG : CTGAACTTACCTTCTAATCTTTTTGGGTTAATTAATCTCACTTACATTGAGGAGAAGTATTCAGGCCTCTCAACGCAAGATCTATTAAATGTCTTGTCTTCCCTTAAGAGATACAGAGGCCATTCACACGGCCACAAGCATTCCGACACAAAG : ATTTGGGTTCCATCAAACCCTCGAGGTGCTGAGAGGCTACCAG</gDNA_template>
            <first_frame> A  P  S   : G  L  T  I  M  Q  Y  F  C  G  S  L  K  S  T  V  C  G  F  S  F  L  *  F  *  N  L  R  G  E  W  V  H  L  R  A   : A  A  L  T  L  E  E  E  M  K  *  *  G  F  L  *  Q  P  L  S  E  L  *  L  V  F  S  *  A  C  R  F  L  L  F  H  *  P  S :   *  T  Y  L  L  I  F  L  G  *  L  I  S  L  T  L  R  R  S  I  Q  A  S  Q  R  K  I  Y  *  M  S  C  L  P  L  R  D  T  E  A  I  H  T  A  T  S  I  P  T  Q  R :   F  G  F  H  Q  T  L  E  V  L  R  G  Y  Q </first_frame>
            <second_frame>  P  L  Q  :  G  *  L  *  C  N  T  F  V  D  H  *  S  Q  L  F  A  A  S  P  F  C  D  S  E  I  S  E  E  N  G  F  T  Y  A  Q  :  Q  L  *  H  *  K  R  K  *  N  D  E  A  S  C  D  N  H  C  R  S  C  D  W  Y  F  L  R  R  V  V  S  Y  S  F  I  D  Q   : A  E  L  T  F  *  S  F  W  V  N  *  S  H  L  H  *  G  E  V  F  R  P  L  N  A  R  S  I  K  C  L  V  F  P  *  E  I  Q  R  P  F  T  R  P  Q  A  F  R  H  K   : D  L  G  S  I  K  P  S  R  C  *  E  A  T   </second_frame>
            <third_frame>   P  F  R :   V  D  Y  N  A  I  L  L  W  I  T  E  V  N  C  L  R  L  L  L  F  V  I  L  K  S  P  R  R  M  G  S  P  T  R  S :   S  S  N  T  R  R  G  N  E  M  M  R  L  L  V  T  T  I  V  G  V  V  I  G  I  F  L  G  V  S  F  P  T  L  S  L  T  K  :  L  N  L  P  S  N  L  F  G  L  I  N  L  T  Y  I  E  E  K  Y  S  G  L  S  T  Q  D  L  L  N  V  L  S  S  L  K  R  Y  R  G  H  S  H  G  H  K  H  S  D  T  K  :  I  W  V  P  S  N  P  R  G  A  E  R  L  P  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0034H10.2" strand="+"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="49988" stop="49995"/>
                    <exon start="50161" stop="50268"/>
                    <exon start="50367" stop="50481"/>
                    <exon start="50734" stop="50886"/>
                    <exon start="51084" stop="51125"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>426</number_coding_nucleotides>
                  <number_encoded_amino_acids>142</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PFRVDYNAILLWITEVNCLRLLLFVILKSPRRMGSPTRSSSNTRRGNEMMRLLVTTIVGVVIGIFLGVSFPTLSLTKLNLPSNLFGLINLTYIEEKYSGLSTQDLLNVLSSLKRYRGHSHGHKHSDTKIWVPSNPRGAERLP</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="+" PGL_start="56539" PGL_stop="59540"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="56539" e_stop="56762"/>
            <exon e_start="57025" e_stop="57127"/>
            <exon e_start="57236" e_stop="57347"/>
            <exon e_start="57467" e_stop="57607"/>
            <exon e_start="57770" e_stop="57874"/>
            <exon e_start="58387" e_stop="58470"/>
            <exon e_start="59046" e_stop="59161"/>
            <exon e_start="59250" e_stop="59351"/>
            <exon e_start="59432" e_stop="59540"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.950" acc_prob="0.981" e_score="0.996"/>
          <exon-intron don_prob="0.269" acc_prob="0.650" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.992" acc_prob="0.929" e_score="1.000"/>
          <exon-intron don_prob="0.904" acc_prob="0.941" e_score="1.000"/>
          <exon-intron don_prob="0.864" acc_prob="0.860" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.946" e_score="1.000"/>
          <exon-intron don_prob="0.981" acc_prob="0.899" e_score="1.000"/>
          <exon-only e_score="0.991"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.996">
            <gDNA_exon_boundary e_start="56539" e_stop="56762" e_length="224"/>
          </exon>
          <intron i_serial="1" don_prob="0.950" acc_prob="0.981">
            <gDNA_intron_boundary i_start="56763" i_stop="57024" i_length="262"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="57025" e_stop="57127" e_length="103"/>
          </exon>
          <intron i_serial="2" don_prob="0.269" acc_prob="0.650">
            <gDNA_intron_boundary i_start="57128" i_stop="57235" i_length="108"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="57236" e_stop="57347" e_length="112"/>
          </exon>
          <intron i_serial="3" don_prob="0.997" acc_prob="0.992">
            <gDNA_intron_boundary i_start="57348" i_stop="57466" i_length="119"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="57467" e_stop="57607" e_length="141"/>
          </exon>
          <intron i_serial="4" don_prob="0.992" acc_prob="0.929">
            <gDNA_intron_boundary i_start="57608" i_stop="57769" i_length="162"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="57770" e_stop="57874" e_length="105"/>
          </exon>
          <intron i_serial="5" don_prob="0.904" acc_prob="0.941">
            <gDNA_intron_boundary i_start="57875" i_stop="58386" i_length="512"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="58387" e_stop="58470" e_length="84"/>
          </exon>
          <intron i_serial="6" don_prob="0.864" acc_prob="0.860">
            <gDNA_intron_boundary i_start="58471" i_stop="59045" i_length="575"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="59046" e_stop="59161" e_length="116"/>
          </exon>
          <intron i_serial="7" don_prob="0.996" acc_prob="0.946">
            <gDNA_intron_boundary i_start="59162" i_stop="59249" i_length="88"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="59250" e_stop="59351" e_length="102"/>
          </exon>
          <intron i_serial="8" don_prob="0.981" acc_prob="0.899">
            <gDNA_intron_boundary i_start="59352" i_stop="59431" i_length="80"/>
          </intron>
          <exon e_serial="9" e_score="0.991">
            <gDNA_exon_boundary e_start="59432" e_stop="59540" e_length="109"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="56539" stop="56762"/>
              <exon start="57025" stop="57127"/>
              <exon start="57236" stop="57347"/>
              <exon start="57467" stop="57607"/>
              <exon start="57770" stop="57874"/>
              <exon start="58387" stop="58470"/>
              <exon start="59046" stop="59161"/>
              <exon start="59250" stop="59351"/>
              <exon start="59432" stop="59540"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U580047" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GAAAAGAAAAGAGGACTGGTCTTCATGTGTTTGGATTTTGAGTTTACTTGCAACGACATCTCGACAAAGAATACATATCCTTTTGACAATTCCAAGGTTGGATATTTTCCTATATTAAAGATTCCGATGAACATTGAAAACTTAACAACATCCCAAATTTTGATTTTGGTTGAAGCATAGATTCTTACTTTCCTAATCTTTCAGATCAGCTACTTCAACTTCAG : GAATCTCCCAACTCATATTTGGGCTAAGCAGATGTTAGTCCTTTTCTGATTCTGAAAAGGATTGTGAGCTTGTGACTAAGATGGGGACGCCTATGAAACGCAG : CTCAAACTCGAGAAGACGGAATGAAAAGATGAGGCTTTTTGTGACTACTTTTATTGGAGTTGTATTCGGGTTTTTCCTAGGTGTAACTTTTCCTACAATTTCATTGTCCAAG : CTGCCCTTACCTACGAATCTTATCCCATCGATTGATCTACCTGACATGGAAAAGTCAGGCCTCTCAACTCAAGCTCTATTAAATGTTTTGAATTCCTTGAAGGATCGTGTTGGCAGTTCACACAAGAATAAGGCCGCGAAG : ATTTGGGTTCCATCAAATCCCAGAGGCGCCGAGAGGCTACCCCCGGGTATTGTAGCATCTGAATCTGATCTTTATACTCGAAGGCTGTGGGGACTGCCAAGTGAG : GACTTGATCATCAAGCCAAGGTACCTTGTGACCTTCACAGTTGGCCTCAAGCAGAAGAGTAACATTGATGCAGCAGTGAAAAAG : TTTTCAGAGAACTTTACCATTATGCTGTTTCACTATGACGGCCGAACAACTGAATGGGATGACCTTGAGTGGTCAGCACGGGCTATCCATGTCAGTACACCGAAACAGACTAAATG : GTGGTATGCAAAACGTTTTCTACATCCTGACATTGTAGCACCATATGACTATATATTCATCTGGGATGAAGACTTGGGGCTTGAAAATTTTAACGCGGAGGA : ATATATAAAGTTGGTGACGAAACATGGTTTGGATATTTCACAGCCTGGTTTAGAACCAAACAGTGGGTTGACATGGCAGATGACAAAAGGGAGAAATGACACTGAAGTT</gDNA_template>
            <first_frame> E  K  K  R  G  L  V  F  M  C  L  D  F  E  F  T  C  N  D  I  S  T  K  N  T  Y  P  F  D  N  S  K  V  G  Y  F  P  I  L  K  I  P  M  N  I  E  N  L  T  T  S  Q  I  L  I  L  V  E  A  *  I  L  T  F  L  I  F  Q  I  S  Y  F  N  F  R :   N  L  P  T  H  I  W  A  K  Q  M  L  V  L  F  *  F  *  K  G  L  *  A  C  D  *  D  G  D  A  Y  E  T  Q  :  L  K  L  E  K  T  E  *  K  D  E  A  F  C  D  Y  F  Y  W  S  C  I  R  V  F  P  R  C  N  F  S  Y  N  F  I  V  Q   : A  A  L  T  Y  E  S  Y  P  I  D  *  S  T  *  H  G  K  V  R  P  L  N  S  S  S  I  K  C  F  E  F  L  E  G  S  C  W  Q  F  T  Q  E  *  G  R  E   : D  L  G  S  I  K  S  Q  R  R  R  E  A  T  P  G  Y  C  S  I  *  I  *  S  L  Y  S  K  A  V  G  T  A  K  *   : G  L  D  H  Q  A  K  V  P  C  D  L  H  S  W  P  Q  A  E  E  *  H  *  C  S  S  E  K   : V  F  R  E  L  Y  H  Y  A  V  S  L  *  R  P  N  N  *  M  G  *  P  *  V  V  S  T  G  Y  P  C  Q  Y  T  E  T  D  *  M  :  V  V  C  K  T  F  S  T  S  *  H  C  S  T  I  *  L  Y  I  H  L  G  *  R  L  G  A  *  K  F  *  R  G  G  :  I  Y  K  V  G  D  E  T  W  F  G  Y  F  T  A  W  F  R  T  K  Q  W  V  D  M  A  D  D  K  R  E  K  *  H  *  S  </first_frame>
            <second_frame>  K  R  K  E  D  W  S  S  C  V  W  I  L  S  L  L  A  T  T  S  R  Q  R  I  H  I  L  L  T  I  P  R  L  D  I  F  L  Y  *  R  F  R  *  T  L  K  T  *  Q  H  P  K  F  *  F  W  L  K  H  R  F  L  L  S  *  S  F  R  S  A  T  S  T  S   : G  I  S  Q  L  I  F  G  L  S  R  C  *  S  F  S  D  S  E  K  D  C  E  L  V  T  K  M  G  T  P  M  K  R  S :   S  N  S  R  R  R  N  E  K  M  R  L  F  V  T  T  F  I  G  V  V  F  G  F  F  L  G  V  T  F  P  T  I  S  L  S  K  :  L  P  L  P  T  N  L  I  P  S  I  D  L  P  D  M  E  K  S  G  L  S  T  Q  A  L  L  N  V  L  N  S  L  K  D  R  V  G  S  S  H  K  N  K  A  A  K  :  I  W  V  P  S  N  P  R  G  A  E  R  L  P  P  G  I  V  A  S  E  S  D  L  Y  T  R  R  L  W  G  L  P  S  E  :  D  L  I  I  K  P  R  Y  L  V  T  F  T  V  G  L  K  Q  K  S  N  I  D  A  A  V  K  K  :  F  S  E  N  F  T  I  M  L  F  H  Y  D  G  R  T  T  E  W  D  D  L  E  W  S  A  R  A  I  H  V  S  T  P  K  Q  T  K  W :   W  Y  A  K  R  F  L  H  P  D  I  V  A  P  Y  D  Y  I  F  I  W  D  E  D  L  G  L  E  N  F  N  A  E  E :   Y  I  K  L  V  T  K  H  G  L  D  I  S  Q  P  G  L  E  P  N  S  G  L  T  W  Q  M  T  K  G  R  N  D  T  E  V </second_frame>
            <third_frame>   K  E  K  R  T  G  L  H  V  F  G  F  *  V  Y  L  Q  R  H  L  D  K  E  Y  I  S  F  *  Q  F  Q  G  W  I  F  S  Y  I  K  D  S  D  E  H  *  K  L  N  N  I  P  N  F  D  F  G  *  S  I  D  S  Y  F  P  N  L  S  D  Q  L  L  Q  L  Q  :  E  S  P  N  S  Y  L  G  *  A  D  V  S  P  F  L  I  L  K  R  I  V  S  L  *  L  R  W  G  R  L  *  N  A   : A  Q  T  R  E  D  G  M  K  R  *  G  F  L  *  L  L  L  L  E  L  Y  S  G  F  S  *  V  *  L  F  L  Q  F  H  C  P  S :   C  P  Y  L  R  I  L  S  H  R  L  I  Y  L  T  W  K  S  Q  A  S  Q  L  K  L  Y  *  M  F  *  I  P  *  R  I  V  L  A  V  H  T  R  I  R  P  R  R :   F  G  F  H  Q  I  P  E  A  P  R  G  Y  P  R  V  L  *  H  L  N  L  I  F  I  L  E  G  C  G  D  C  Q  V  R :   T  *  S  S  S  Q  G  T  L  *  P  S  Q  L  A  S  S  R  R  V  T  L  M  Q  Q  *  K  S :   F  Q  R  T  L  P  L  C  C  F  T  M  T  A  E  Q  L  N  G  M  T  L  S  G  Q  H  G  L  S  M  S  V  H  R  N  R  L  N   : G  G  M  Q  N  V  F  Y  I  L  T  L  *  H  H  M  T  I  Y  S  S  G  M  K  T  W  G  L  K  I  L  T  R  R   : N  I  *  S  W  *  R  N  M  V  W  I  F  H  S  L  V  *  N  Q  T  V  G  *  H  G  R  *  Q  K  G  E  M  T  L  K   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0034H10.2" strand="+"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="57063" stop="57127"/>
                    <exon start="57236" stop="57347"/>
                    <exon start="57467" stop="57607"/>
                    <exon start="57770" stop="57874"/>
                    <exon start="58387" stop="58470"/>
                    <exon start="59046" stop="59161"/>
                    <exon start="59250" stop="59351"/>
                    <exon start="59432" stop="59540"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>834</number_coding_nucleotides>
                  <number_encoded_amino_acids>278</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SFSDSEKDCELVTKMGTPMKRSSNSRRRNEKMRLFVTTFIGVVFGFFLGVTFPTISLSKLPLPTNLIPSIDLPDMEKSGLSTQALLNVLNSLKDRVGSSHKNKAAKIWVPSNPRGAERLPPGIVASESDLYTRRLWGLPSEDLIIKPRYLVTFTVGLKQKSNIDAAVKKFSENFTIMLFHYDGRTTEWDDLEWSARAIHVSTPKQTKWWYAKRFLHPDIVAPYDYIFIWDEDLGLENFNAEEYIKLVTKHGLDISQPGLEPNSGLTWQMTKGRNDTEV</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="-" PGL_start="61825" PGL_stop="61018"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="61825" e_stop="61794"/>
            <exon e_start="61501" e_stop="61018"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.988" acc_prob="0.949" e_score="0.969"/>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.969">
            <gDNA_exon_boundary e_start="61825" e_stop="61794" e_length="32"/>
          </exon>
          <intron i_serial="1" don_prob="0.988" acc_prob="0.949">
            <gDNA_intron_boundary i_start="61793" i_stop="61502" i_length="292"/>
          </intron>
          <exon e_serial="2" e_score="0.996">
            <gDNA_exon_boundary e_start="61501" e_stop="61018" e_length="484"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61825" stop="61794"/>
              <exon start="61501" stop="61018"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U576636" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCACTTGACAGCTCTGCGACGAGATTCAATTG : GAGAGTATACAGCGGATGATGCTTGGGAATTTAAAGAATTGGAAGAGGCAATCACCAAAGGATATTTGTAAGATTTTTTTGAGGTTCCATGGGACAGAGTTATCCAGTACATGTCTGTGCTGGTAAGAAGCTGCAGGTATCAGCGGAATAGTCTGGGTGCCAACAAGCTGGCTTGCACACCACCATTGAAGAAGAAACAGTTGTTGGAAATTCCACATTTTTGGTGGCAATTGGAGATCTATACATACTTATCTTCTGTCTAGCTACTTCAACAAAGGGACAGTAGTTTTTTCACCTTCTCCTCCACATTACCTCTTTCCTTGTGGGCGAAAAGTGTTGTGATGGAACCTTTATAACATATAGATTAGGAAGAACTGTAATATATCTTTGTCTTTCAGTCATTGCTGGTAATCTGGCACAACTCAAAGTGTCAAGTGCCATGAAAAATACATATTTTTATCTGTTATTAGATCAGTTCTGTTAA</gDNA_template>
            <first_frame> S  L  D  S  S  A  T  R  F  N  W :   R  V  Y  S  G  *  C  L  G  I  *  R  I  G  R  G  N  H  Q  R  I  F  V  R  F  F  *  G  S  M  G  Q  S  Y  P  V  H  V  C  A  G  K  K  L  Q  V  S  A  E  *  S  G  C  Q  Q  A  G  L  H  T  T  I  E  E  E  T  V  V  G  N  S  T  F  L  V  A  I  G  D  L  Y  I  L  I  F  C  L  A  T  S  T  K  G  Q  *  F  F  H  L  L  L  H  I  T  S  F  L  V  G  E  K  C  C  D  G  T  F  I  T  Y  R  L  G  R  T  V  I  Y  L  C  L  S  V  I  A  G  N  L  A  Q  L  K  V  S  S  A  M  K  N  T  Y  F  Y  L  L  L  D  Q  F  C  * </first_frame>
            <second_frame>  H  L  T  A  L  R  R  D  S  I   : G  E  Y  T  A  D  D  A  W  E  F  K  E  L  E  E  A  I  T  K  G  Y  L  *  D  F  F  E  V  P  W  D  R  V  I  Q  Y  M  S  V  L  V  R  S  C  R  Y  Q  R  N  S  L  G  A  N  K  L  A  C  T  P  P  L  K  K  K  Q  L  L  E  I  P  H  F  W  W  Q  L  E  I  Y  T  Y  L  S  S  V  *  L  L  Q  Q  R  D  S  S  F  F  T  F  S  S  T  L  P  L  S  L  W  A  K  S  V  V  M  E  P  L  *  H  I  D  *  E  E  L  *  Y  I  F  V  F  Q  S  L  L  V  I  W  H  N  S  K  C  Q  V  P  *  K  I  H  I  F  I  C  Y  *  I  S  S  V   </second_frame>
            <third_frame>   T  *  Q  L  C  D  E  I  Q  L  :  E  S  I  Q  R  M  M  L  G  N  L  K  N  W  K  R  Q  S  P  K  D  I  C  K  I  F  L  R  F  H  G  T  E  L  S  S  T  C  L  C  W  *  E  A  A  G  I  S  G  I  V  W  V  P  T  S  W  L  A  H  H  H  *  R  R  N  S  C  W  K  F  H  I  F  G  G  N  W  R  S  I  H  T  Y  L  L  S  S  Y  F  N  K  G  T  V  V  F  S  P  S  P  P  H  Y  L  F  P  C  G  R  K  V  L  *  W  N  L  Y  N  I  *  I  R  K  N  C  N  I  S  L  S  F  S  H  C  W  *  S  G  T  T  Q  S  V  K  C  H  E  K  Y  I  F  L  S  V  I  R  S  V  L  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0034H10.2" strand="-"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="61215" stop="61018"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>195</number_coding_nucleotides>
                  <number_encoded_amino_acids>65</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FFHLLLHITSFLVGEKCCDGTFITYRLGRTVIYLCLSVIAGNLAQLKVSSAMKNTYFYLLLDQFC*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="-" PGL_start="64714" PGL_stop="62961"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="64714" e_stop="64694"/>
            <exon e_start="63897" e_stop="63815"/>
            <exon e_start="63660" e_stop="63582"/>
            <exon e_start="63328" e_stop="62961"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.687" acc_prob="0.994" e_score="0.952"/>
          <exon-intron don_prob="0.042" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.939" acc_prob="0.997" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.952">
            <gDNA_exon_boundary e_start="64714" e_stop="64694" e_length="21"/>
          </exon>
          <intron i_serial="1" don_prob="0.687" acc_prob="0.994">
            <gDNA_intron_boundary i_start="64693" i_stop="63898" i_length="796"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="63897" e_stop="63815" e_length="83"/>
          </exon>
          <intron i_serial="2" don_prob="0.042" acc_prob="0.996">
            <gDNA_intron_boundary i_start="63814" i_stop="63661" i_length="154"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="63660" e_stop="63582" e_length="79"/>
          </exon>
          <intron i_serial="3" don_prob="0.939" acc_prob="0.997">
            <gDNA_intron_boundary i_start="63581" i_stop="63329" i_length="253"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="63328" e_stop="62961" e_length="368"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64714" stop="64694"/>
              <exon start="63897" stop="63815"/>
              <exon start="63660" stop="63582"/>
              <exon start="63328" stop="62961"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U603939" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CGCTTAACAAAAGTGAAAAAG : GTTGGCCATGCTGGAACACTTGATCCTATGGCAACTGGATTATTGATTGTATGTGTTGGTAAATCTACAAAGATCGTTGACAG : CTATCAGGGTATGACTAAGGGCTACAGTGGGATCTTCCGTTTGGGAGAAGCCACCTCTACCTGGGATGCAGATTCCCCG : GTTATTCAACGAGAGCCATGGGAGCATATCAAGGATGAGGACATAAAGAAAACGGCAGCATCCTTTTTTGGAGAGATATGGCAAGTCCCTCCGATGTTCTCAGCAATCAAAGTAAGTTTATTTTTGTTGCAGCACTTCCGATCGTCCAATTTTTTATTTTGCTGAACATGTAGTGTGCCTCTGCATATTTTGATAATGTACCGAATTATTACATCACTTCCTTACCCTGGAGAATAGAATTAGTGATACCAAATTAACACTTCCTCAAACAATTCATTCTTAAAGTTTTCAACATGCTTAATTGTATTGAAGTCATGTTGTTTATCGATCTCATGAAAAGAAAGCGTGTTGAATCAACTTCAGCTATA</gDNA_template>
            <first_frame> R  L  T  K  V  K  K  :  V  G  H  A  G  T  L  D  P  M  A  T  G  L  L  I  V  C  V  G  K  S  T  K  I  V  D  S :   Y  Q  G  M  T  K  G  Y  S  G  I  F  R  L  G  E  A  T  S  T  W  D  A  D  S  P  :  V  I  Q  R  E  P  W  E  H  I  K  D  E  D  I  K  K  T  A  A  S  F  F  G  E  I  W  Q  V  P  P  M  F  S  A  I  K  V  S  L  F  L  L  Q  H  F  R  S  S  N  F  L  F  C  *  T  C  S  V  P  L  H  I  L  I  M  Y  R  I  I  T  S  L  P  Y  P  G  E  *  N  *  *  Y  Q  I  N  T  S  S  N  N  S  F  L  K  F  S  T  C  L  I  V  L  K  S  C  C  L  S  I  S  *  K  E  S  V  L  N  Q  L  Q  L   </first_frame>
            <second_frame>  A  *  Q  K  *  K  R :   L  A  M  L  E  H  L  I  L  W  Q  L  D  Y  *  L  Y  V  L  V  N  L  Q  R  S  L  T   : A  I  R  V  *  L  R  A  T  V  G  S  S  V  W  E  K  P  P  L  P  G  M  Q  I  P  R :   L  F  N  E  S  H  G  S  I  S  R  M  R  T  *  R  K  R  Q  H  P  F  L  E  R  Y  G  K  S  L  R  C  S  Q  Q  S  K  *  V  Y  F  C  C  S  T  S  D  R  P  I  F  Y  F  A  E  H  V  V  C  L  C  I  F  *  *  C  T  E  L  L  H  H  F  L  T  L  E  N  R  I  S  D  T  K  L  T  L  P  Q  T  I  H  S  *  S  F  Q  H  A  *  L  Y  *  S  H  V  V  Y  R  S  H  E  K  K  A  C  *  I  N  F  S  Y  </second_frame>
            <third_frame>   L  N  K  S  E  K   : G  W  P  C  W  N  T  *  S  Y  G  N  W  I  I  D  C  M  C  W  *  I  Y  K  D  R  *  Q  :  L  S  G  Y  D  *  G  L  Q  W  D  L  P  F  G  R  S  H  L  Y  L  G  C  R  F  P   : G  Y  S  T  R  A  M  G  A  Y  Q  G  *  G  H  K  E  N  G  S  I  L  F  W  R  D  M  A  S  P  S  D  V  L  S  N  Q  S  K  F  I  F  V  A  A  L  P  I  V  Q  F  F  I  L  L  N  M  *  C  A  S  A  Y  F  D  N  V  P  N  Y  Y  I  T  S  L  P  W  R  I  E  L  V  I  P  N  *  H  F  L  K  Q  F  I  L  K  V  F  N  M  L  N  C  I  E  V  M  L  F  I  D  L  M  K  R  K  R  V  E  S  T  S  A  I </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0034H10.2" strand="-"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="64714" stop="64694"/>
                    <exon start="63897" stop="63815"/>
                    <exon start="63660" stop="63582"/>
                    <exon start="63328" stop="63164"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>345</number_coding_nucleotides>
                  <number_encoded_amino_acids>115</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RLTKVKKVGHAGTLDPMATGLLIVCVGKSTKIVDSYQGMTKGYSGIFRLGEATSTWDADSPVIQREPWEHIKDEDIKKTAASFFGEIWQVPPMFSAIKVSLFLLQHFRSSNFLFC*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="-" PGL_start="66544" PGL_stop="65975"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="66544" e_stop="65975"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.993"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.993">
            <gDNA_exon_boundary e_start="66544" e_stop="65975" e_length="570"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="66544" stop="65975"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U573431" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGAACAACATAAATCTCTCTAACGAACCAAATCTTTACTCATACAACATTATCTGCCAAATCATTCCAGAAATTCTTAATCAATCAATACAACATAATCACGAAAATTTTTTATTTTTAAAGTTTGAAGATCCCGTTACATATTATACCTCGAGAAGTAGTATGTTTTAGTGGTGTGGGTTGAAGGTTTTTACCAAGAAAGAGGAACGATACTGTCACTGCAAGTCGCCAAAAATGGCGAAGTCAGTAGTAATTCCTCGCATGTCTCTCATCTTCCTCCGCTCCAAATCCATCTCTCAGCCACGCACCGTCTTCTTTCCCTCAATGCTCAATTCCCTTTTGCTCAAATCCCATTCACTTCACTTTTTCTCTACAACTTCAACCCCATACCCACTTCAATACGAAATGATAATCTCCCGCCCTGCAAACCCACCTTCACCAACCCTAAAATCTCGCCAACAACGCTTCCTTCCCAAGTCAAAACCTAATGATTCAGAACCCCTACCCGGTTCAGAACTTGGGTTCGACGATTGGGTCGACAGAAAATTGAATTTGAAATCTTCTTCTCCAC</gDNA_template>
            <first_frame> R  T  T  *  I  S  L  T  N  Q  I  F  T  H  T  T  L  S  A  K  S  F  Q  K  F  L  I  N  Q  Y  N  I  I  T  K  I  F  Y  F  *  S  L  K  I  P  L  H  I  I  P  R  E  V  V  C  F  S  G  V  G  *  R  F  L  P  R  K  R  N  D  T  V  T  A  S  R  Q  K  W  R  S  Q  *  *  F  L  A  C  L  S  S  S  S  A  P  N  P  S  L  S  H  A  P  S  S  F  P  Q  C  S  I  P  F  C  S  N  P  I  H  F  T  F  S  L  Q  L  Q  P  H  T  H  F  N  T  K  *  *  S  P  A  L  Q  T  H  L  H  Q  P  *  N  L  A  N  N  A  S  F  P  S  Q  N  L  M  I  Q  N  P  Y  P  V  Q  N  L  G  S  T  I  G  S  T  E  N  *  I  *  N  L  L  L  H </first_frame>
            <second_frame>  E  Q  H  K  S  L  *  R  T  K  S  L  L  I  Q  H  Y  L  P  N  H  S  R  N  S  *  S  I  N  T  T  *  S  R  K  F  F  I  F  K  V  *  R  S  R  Y  I  L  Y  L  E  K  *  Y  V  L  V  V  W  V  E  G  F  Y  Q  E  R  G  T  I  L  S  L  Q  V  A  K  N  G  E  V  S  S  N  S  S  H  V  S  H  L  P  P  L  Q  I  H  L  S  A  T  H  R  L  L  S  L  N  A  Q  F  P  F  A  Q  I  P  F  T  S  L  F  L  Y  N  F  N  P  I  P  T  S  I  R  N  D  N  L  P  P  C  K  P  T  F  T  N  P  K  I  S  P  T  T  L  P  S  Q  V  K  T  *  *  F  R  T  P  T  R  F  R  T  W  V  R  R  L  G  R  Q  K  I  E  F  E  I  F  F  S   </second_frame>
            <third_frame>   N  N  I  N  L  S  N  E  P  N  L  Y  S  Y  N  I  I  C  Q  I  I  P  E  I  L  N  Q  S  I  Q  H  N  H  E  N  F  L  F  L  K  F  E  D  P  V  T  Y  Y  T  S  R  S  S  M  F  *  W  C  G  L  K  V  F  T  K  K  E  E  R  Y  C  H  C  K  S  P  K  M  A  K  S  V  V  I  P  R  M  S  L  I  F  L  R  S  K  S  I  S  Q  P  R  T  V  F  F  P  S  M  L  N  S  L  L  L  K  S  H  S  L  H  F  F  S  T  T  S  T  P  Y  P  L  Q  Y  E  M  I  I  S  R  P  A  N  P  P  S  P  T  L  K  S  R  Q  Q  R  F  L  P  K  S  K  P  N  D  S  E  P  L  P  G  S  E  L  G  F  D  D  W  V  D  R  K  L  N  L  K  S  S  S  P  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0034H10.2" strand="-"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="66374" stop="65976"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>399</number_coding_nucleotides>
                  <number_encoded_amino_acids>133</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>WCGLKVFTKKEERYCHCKSPKMAKSVVIPRMSLIFLRSKSISQPRTVFFPSMLNSLLLKSHSLHFFSTTSTPYPLQYEMIISRPANPPSPTLKSRQQRFLPKSKPNDSEPLPGSELGFDDWVDRKLNLKSSSP</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0034H10.2" strand="-"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="66384" stop="66058"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>324</number_coding_nucleotides>
                  <number_encoded_amino_acids>108</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>YVLVVWVEGFYQERGTILSLQVAKNGEVSSNSSHVSHLPPLQIHLSATHRLLSLNAQFPFAQIPFTSLFLYNFNPIPTSIRNDNLPPCKPTFTNPKISPTTLPSQVKT*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="15" PGL_strand="+" PGL_start="67169" PGL_stop="67849"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="67169" e_stop="67849"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="67169" e_stop="67849" e_length="681"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="67169" stop="67849"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U581110" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CAATTTAGGCCAGCGAATTATACAATTGTATATGTATAGCAAATTATACAGTTTTATGTTTGCTATGCAGCGCAATTATGCAAAGTTTGCTAGCATACAAATATGAATTTTTTATTTGCTATATGTAAAAGTTGCCCAATAATGTATCATGGACATATGAAAATAGTTCTTCCAAAATCAGTTTATCTCCGAGTTAATACTTTAGATGGTCATTCAACTAATCTTTGTGCTCAAAACCCCGATTCAAATAGTCATTTGTTTGGTATCGCCGAAGGAGCGGGAACGGTCATTCTAACTCTTCTCGGGGGATTCCACCCATACTTTCTCTCAAAAAGTCACTCAACTTTCAATTTTTCCTTAAAAGTATTCAATTATCCATACATTTCTCAAAAAGTGACTCAACTTTGAATTTTAACTCAAAAGTGACTCAACTATTTATTTTTTCCTCAAGTCACTCAATCTATTAAATTACTTTTTAAATTAAAATTTATTTACGTTAATTGTTTATATAACAAATCAAAATTTTTTAAAAAAATAAAAAATACTATTTAGTGATCCACCCACCTAACCCGACCCATTAAAAAATATAATATGAACCATTTTATTTTACCCTTAATTCTAAATTATTCCCTCTCTTTCTCCTCTACATTTAATATATACACATAGCTTATTTAATTCGAT</gDNA_template>
            <first_frame> Q  F  R  P  A  N  Y  T  I  V  Y  V  *  Q  I  I  Q  F  Y  V  C  Y  A  A  Q  L  C  K  V  C  *  H  T  N  M  N  F  L  F  A  I  C  K  S  C  P  I  M  Y  H  G  H  M  K  I  V  L  P  K  S  V  Y  L  R  V  N  T  L  D  G  H  S  T  N  L  C  A  Q  N  P  D  S  N  S  H  L  F  G  I  A  E  G  A  G  T  V  I  L  T  L  L  G  G  F  H  P  Y  F  L  S  K  S  H  S  T  F  N  F  S  L  K  V  F  N  Y  P  Y  I  S  Q  K  V  T  Q  L  *  I  L  T  Q  K  *  L  N  Y  L  F  F  P  Q  V  T  Q  S  I  K  L  L  F  K  L  K  F  I  Y  V  N  C  L  Y  N  K  S  K  F  F  K  K  I  K  N  T  I  *  *  S  T  H  L  T  R  P  I  K  K  Y  N  M  N  H  F  I  L  P  L  I  L  N  Y  S  L  S  F  S  S  T  F  N  I  Y  T  *  L  I  *  F  D </first_frame>
            <second_frame>  N  L  G  Q  R  I  I  Q  L  Y  M  Y  S  K  L  Y  S  F  M  F  A  M  Q  R  N  Y  A  K  F  A  S  I  Q  I  *  I  F  Y  L  L  Y  V  K  V  A  Q  *  C  I  M  D  I  *  K  *  F  F  Q  N  Q  F  I  S  E  L  I  L  *  M  V  I  Q  L  I  F  V  L  K  T  P  I  Q  I  V  I  C  L  V  S  P  K  E  R  E  R  S  F  *  L  F  S  G  D  S  T  H  T  F  S  Q  K  V  T  Q  L  S  I  F  P  *  K  Y  S  I  I  H  T  F  L  K  K  *  L  N  F  E  F  *  L  K  S  D  S  T  I  Y  F  F  L  K  S  L  N  L  L  N  Y  F  L  N  *  N  L  F  T  L  I  V  Y  I  T  N  Q  N  F  L  K  K  *  K  I  L  F  S  D  P  P  T  *  P  D  P  L  K  N  I  I  *  T  I  L  F  Y  P  *  F  *  I  I  P  S  L  S  P  L  H  L  I  Y  T  H  S  L  F  N  S   </second_frame>
            <third_frame>   I  *  A  S  E  L  Y  N  C  I  C  I  A  N  Y  T  V  L  C  L  L  C  S  A  I  M  Q  S  L  L  A  Y  K  Y  E  F  F  I  C  Y  M  *  K  L  P  N  N  V  S  W  T  Y  E  N  S  S  S  K  I  S  L  S  P  S  *  Y  F  R  W  S  F  N  *  S  L  C  S  K  P  R  F  K  *  S  F  V  W  Y  R  R  R  S  G  N  G  H  S  N  S  S  R  G  I  P  P  I  L  S  L  K  K  S  L  N  F  Q  F  F  L  K  S  I  Q  L  S  I  H  F  S  K  S  D  S  T  L  N  F  N  S  K  V  T  Q  L  F  I  F  S  S  S  H  S  I  Y  *  I  T  F  *  I  K  I  Y  L  R  *  L  F  I  *  Q  I  K  I  F  *  K  N  K  K  Y  Y  L  V  I  H  P  P  N  P  T  H  *  K  I  *  Y  E  P  F  Y  F  T  L  N  S  K  L  F  P  L  F  L  L  Y  I  *  Y  I  H  I  A  Y  L  I  R  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0034H10.2" strand="+"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="67262" stop="67576"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>312</number_coding_nucleotides>
                  <number_encoded_amino_acids>104</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>HTNMNFLFAICKSCPIMYHGHMKIVLPKSVYLRVNTLDGHSTNLCAQNPDSNSHLFGIAEGAGTVILTLLGGFHPYFLSKSHSTFNFSLKVFNYPYISQKVTQL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="16" PGL_strand="+" PGL_start="67971" PGL_stop="70700"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="67971" e_stop="68418"/>
            <exon e_start="70271" e_stop="70700"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="0.995"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="67971" e_stop="68418" e_length="448"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.999">
            <gDNA_intron_boundary i_start="68419" i_stop="70270" i_length="1852"/>
          </intron>
          <exon e_serial="2" e_score="0.995">
            <gDNA_exon_boundary e_start="70271" e_stop="70700" e_length="430"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="67971" stop="68418"/>
              <exon start="70271" stop="70700"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U584836" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="16" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTTCACAACTCCTAAAATACTCCAGTGATAGGTCTGCGCTTTACTCTTTCAAAGAGGAGTGCAACTGCTATTGCAATTTTATTTTGAATTTCAGTCGATGGCGGCAGGGGATTGGGCAAACGAAGACGAACTGGAGCTCGTTAACGAGGATGGCTTCGTCTACAAGCGTCGGAAGAAGTTTCATCTTAACCCAACCGCTGCTCCGAAGCTAAAAGATCCGGCAGTTGAGGAGAAGAATCGACTGCAAAGGAAGAAAAAGGTGCTCATGAAAATCAAAGAGAGATACCAAAACGAGATCAACCAGTGGGAACTTTTATCAACAACATTGAGTGAAATGCAGAAAAGTCAGCCAAACCCTTATCAAGAAAGGGACACTCTATCATTCAACCCGCCGGTCATGTCATCGGATCCGACTTGCCAACCCCTTGTTGATCAGCTCCTTACTCAG : GTTGAAGCACAGGAGGCTGTAATTGGCAACATATCAAAACTTTGTGATGTTGTTGAAGCTGTCTGGACTGCACAAGAAGAAAAAATGAAACAGTCAGTTTTGGACCTCCCGATCTGGGCACACACACCTGGTGAACTTATTTCTTCCCTGTGTTCAGATTAAGTTCTGCAAGAGAACTTTACCAGGGAAAAATTACGTCGATGTGTCTTCGGGCTTGTTACCTTTATTCAGTTTCTTAGTTTGAGTTTGTTTTGTATATATTCTTCTTGGACCTTCCCGCTTCAAATGATGGGAATGACCACTTAGATTCAGGAATCCTCTGTTGTTGGAAAGGAGTGAGATGTGGTTGTGTAACATCTTTGTAATGTTTAACATCTTTTCCGTGTTCACCTGAATATTTTTGACAGTCTTGTCAATTTTTCTTTAAGTA</gDNA_template>
            <first_frame> F  H  N  S  *  N  T  P  V  I  G  L  R  F  T  L  S  K  R  S  A  T  A  I  A  I  L  F  *  I  S  V  D  G  G  R  G  L  G  K  R  R  R  T  G  A  R  *  R  G  W  L  R  L  Q  A  S  E  E  V  S  S  *  P  N  R  C  S  E  A  K  R  S  G  S  *  G  E  E  S  T  A  K  E  E  K  G  A  H  E  N  Q  R  E  I  P  K  R  D  Q  P  V  G  T  F  I  N  N  I  E  *  N  A  E  K  S  A  K  P  L  S  R  K  G  H  S  I  I  Q  P  A  G  H  V  I  G  S  D  L  P  T  P  C  *  S  A  P  Y  S   : G  *  S  T  G  G  C  N  W  Q  H  I  K  T  L  *  C  C  *  S  C  L  D  C  T  R  R  K  N  E  T  V  S  F  G  P  P  D  L  G  T  H  T  W  *  T  Y  F  F  P  V  F  R  L  S  S  A  R  E  L  Y  Q  G  K  I  T  S  M  C  L  R  A  C  Y  L  Y  S  V  S  *  F  E  F  V  L  Y  I  F  F  L  D  L  P  A  S  N  D  G  N  D  H  L  D  S  G  I  L  C  C  W  K  G  V  R  C  G  C  V  T  S  L  *  C  L  T  S  F  P  C  S  P  E  Y  F  *  Q  S  C  Q  F  F  F  K   </first_frame>
            <second_frame>  F  T  T  P  K  I  L  Q  *  *  V  C  A  L  L  F  Q  R  G  V  Q  L  L  L  Q  F  Y  F  E  F  Q  S  M  A  A  G  D  W  A  N  E  D  E  L  E  L  V  N  E  D  G  F  V  Y  K  R  R  K  K  F  H  L  N  P  T  A  A  P  K  L  K  D  P  A  V  E  E  K  N  R  L  Q  R  K  K  K  V  L  M  K  I  K  E  R  Y  Q  N  E  I  N  Q  W  E  L  L  S  T  T  L  S  E  M  Q  K  S  Q  P  N  P  Y  Q  E  R  D  T  L  S  F  N  P  P  V  M  S  S  D  P  T  C  Q  P  L  V  D  Q  L  L  T  Q  :  V  E  A  Q  E  A  V  I  G  N  I  S  K  L  C  D  V  V  E  A  V  W  T  A  Q  E  E  K  M  K  Q  S  V  L  D  L  P  I  W  A  H  T  P  G  E  L  I  S  S  L  C  S  D  *  V  L  Q  E  N  F  T  R  E  K  L  R  R  C  V  F  G  L  V  T  F  I  Q  F  L  S  L  S  L  F  C  I  Y  S  S  W  T  F  P  L  Q  M  M  G  M  T  T  *  I  Q  E  S  S  V  V  G  K  E  *  D  V  V  V  *  H  L  C  N  V  *  H  L  F  R  V  H  L  N  I  F  D  S  L  V  N  F  S  L  S  </second_frame>
            <third_frame>   S  Q  L  L  K  Y  S  S  D  R  S  A  L  Y  S  F  K  E  E  C  N  C  Y  C  N  F  I  L  N  F  S  R  W  R  Q  G  I  G  Q  T  K  T  N  W  S  S  L  T  R  M  A  S  S  T  S  V  G  R  S  F  I  L  T  Q  P  L  L  R  S  *  K  I  R  Q  L  R  R  R  I  D  C  K  G  R  K  R  C  S  *  K  S  K  R  D  T  K  T  R  S  T  S  G  N  F  Y  Q  Q  H  *  V  K  C  R  K  V  S  Q  T  L  I  K  K  G  T  L  Y  H  S  T  R  R  S  C  H  R  I  R  L  A  N  P  L  L  I  S  S  L  L  R :   L  K  H  R  R  L  *  L  A  T  Y  Q  N  F  V  M  L  L  K  L  S  G  L  H  K  K  K  K  *  N  S  Q  F  W  T  S  R  S  G  H  T  H  L  V  N  L  F  L  P  C  V  Q  I  K  F  C  K  R  T  L  P  G  K  N  Y  V  D  V  S  S  G  L  L  P  L  F  S  F  L  V  *  V  C  F  V  Y  I  L  L  G  P  S  R  F  K  *  W  E  *  P  L  R  F  R  N  P  L  L  L  E  R  S  E  M  W  L  C  N  I  F  V  M  F  N  I  F  S  V  F  T  *  I  F  L  T  V  L  S  I  F  L  *  V </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0034H10.2" strand="+"/>
                <serials PGL_serial="16" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="68002" stop="68418"/>
                    <exon start="70271" stop="70432"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>576</number_coding_nucleotides>
                  <number_encoded_amino_acids>192</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VCALLFQRGVQLLLQFYFEFQSMAAGDWANEDELELVNEDGFVYKRRKKFHLNPTAAPKLKDPAVEEKNRLQRKKKVLMKIKERYQNEINQWELLSTTLSEMQKSQPNPYQERDTLSFNPPVMSSDPTCQPLVDQLLTQVEAQEAVIGNISKLCDVVEAVWTAQEEKMKQSVLDLPIWAHTPGELISSLCSD*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="17" PGL_strand="-" PGL_start="74720" PGL_stop="71325"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="74720" e_stop="74430"/>
            <exon e_start="74218" e_stop="74014"/>
            <exon e_start="73529" e_stop="73341"/>
            <exon e_start="73246" e_stop="73218"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.000" e_score="0.993"/>
          <exon-intron don_prob="0.976" acc_prob="0.871" e_score="0.990"/>
          <exon-intron don_prob="0.668" acc_prob="1.000" e_score="0.989"/>
          <exon-only e_score="0.931"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.993">
            <gDNA_exon_boundary e_start="74720" e_stop="74430" e_length="291"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.000">
            <gDNA_intron_boundary i_start="74429" i_stop="74219" i_length="211"/>
          </intron>
          <exon e_serial="2" e_score="0.990">
            <gDNA_exon_boundary e_start="74218" e_stop="74014" e_length="205"/>
          </exon>
          <intron i_serial="2" don_prob="0.976" acc_prob="0.871">
            <gDNA_intron_boundary i_start="74013" i_stop="73530" i_length="484"/>
          </intron>
          <exon e_serial="3" e_score="0.989">
            <gDNA_exon_boundary e_start="73529" e_stop="73341" e_length="189"/>
          </exon>
          <intron i_serial="3" don_prob="0.668" acc_prob="1.000">
            <gDNA_intron_boundary i_start="73340" i_stop="73247" i_length="94"/>
          </intron>
          <exon e_serial="4" e_score="0.931">
            <gDNA_exon_boundary e_start="73246" e_stop="73218" e_length="29"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="74720" stop="74430"/>
              <exon start="74218" stop="74014"/>
              <exon start="73529" stop="73341"/>
              <exon start="73246" stop="73218"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U582212" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="17" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGACCGCTGTAGATTCCAATATCTGCCGTAACAGTAGCTAACGATTAGATCTATAGATTCCAATTTCTGCAGTAACACCTACAATAAGCAACAATGGCGGCAGTGATCGAGCACAAGTCTTACGCTAGAGTTGGACTGCTTGGAAACCCTAGCGATGTTTATTTTGGGAACACTATATCCTTCAGCCTCGGGAATTTTTGGGCTTCTGTTCGTTTGGAACCTTCTATAGATCTCGTCATTGTTCCTCATCCTTCTCACGATCTCGTCCAATTCAATTCAATTTCTCACCTG : TTCTATGTGGATTCTCTTGCAGGTTGATTGAATTTGACTTAACACTTGGCTGTAGGTGAACAGGTTGCAGAATGAGGGGTACTATGGAGGGGTTCGTTTACTTATGGCAATCGTTAAAATATTTCACAACTATTGCAAAGAGAGCAACATCACCTTACATGATGGGAATTTCACTCTCTCGTATGACACTAACATTCCCCGCCAG : ACAGGGCTTTCAGGTTCTAGTGCAATCGTAAGTGCTGCACTGAGTTGCCTTCTTGATTTTTACAAAGTCAGACATCTCATCAAAGTTGAGGTAAGGCCGAACCTTGTCCTTAATGCAGAGAAGGAACTTGGAATTGTTGCAGGTCTTCAAGATAGAGTGGCCCAGGTGTATGGAGGCGTTGTATATATG : GACTTTGACAAGAATCACATGGATGAATT</gDNA_template>
            <first_frame> R  P  L  *  I  P  I  S  A  V  T  V  A  N  D  *  I  Y  R  F  Q  F  L  Q  *  H  L  Q  *  A  T  M  A  A  V  I  E  H  K  S  Y  A  R  V  G  L  L  G  N  P  S  D  V  Y  F  G  N  T  I  S  F  S  L  G  N  F  W  A  S  V  R  L  E  P  S  I  D  L  V  I  V  P  H  P  S  H  D  L  V  Q  F  N  S  I  S  H  L  :  F  Y  V  D  S  L  A  G  *  L  N  L  T  *  H  L  A  V  G  E  Q  V  A  E  *  G  V  L  W  R  G  S  F  T  Y  G  N  R  *  N  I  S  Q  L  L  Q  R  E  Q  H  H  L  T  *  W  E  F  H  S  L  V  *  H  *  H  S  P  P   : D  R  A  F  R  F  *  C  N  R  K  C  C  T  E  L  P  S  *  F  L  Q  S  Q  T  S  H  Q  S  *  G  K  A  E  P  C  P  *  C  R  E  G  T  W  N  C  C  R  S  S  R  *  S  G  P  G  V  W  R  R  C  I  Y   : G  L  *  Q  E  S  H  G  *  I </first_frame>
            <second_frame>  D  R  C  R  F  Q  Y  L  P  *  Q  *  L  T  I  R  S  I  D  S  N  F  C  S  N  T  Y  N  K  Q  Q  W  R  Q  *  S  S  T  S  L  T  L  E  L  D  C  L  E  T  L  A  M  F  I  L  G  T  L  Y  P  S  A  S  G  I  F  G  L  L  F  V  W  N  L  L  *  I  S  S  L  F  L  I  L  L  T  I  S  S  N  S  I  Q  F  L  T  C :   S  M  W  I  L  L  Q  V  D  *  I  *  L  N  T  W  L  *  V  N  R  L  Q  N  E  G  Y  Y  G  G  V  R  L  L  M  A  I  V  K  I  F  H  N  Y  C  K  E  S  N  I  T  L  H  D  G  N  F  T  L  S  Y  D  T  N  I  P  R  Q  :  T  G  L  S  G  S  S  A  I  V  S  A  A  L  S  C  L  L  D  F  Y  K  V  R  H  L  I  K  V  E  V  R  P  N  L  V  L  N  A  E  K  E  L  G  I  V  A  G  L  Q  D  R  V  A  Q  V  Y  G  G  V  V  Y  M  :  D  F  D  K  N  H  M  D  E   </second_frame>
            <third_frame>   T  A  V  D  S  N  I  C  R  N  S  S  *  R  L  D  L  *  I  P  I  S  A  V  T  P  T  I  S  N  N  G  G  S  D  R  A  Q  V  L  R  *  S  W  T  A  W  K  P  *  R  C  L  F  W  E  H  Y  I  L  Q  P  R  E  F  L  G  F  C  S  F  G  T  F  Y  R  S  R  H  C  S  S  S  F  S  R  S  R  P  I  Q  F  N  F  S  P   : V  L  C  G  F  S  C  R  L  I  E  F  D  L  T  L  G  C  R  *  T  G  C  R  M  R  G  T  M  E  G  F  V  Y  L  W  Q  S  L  K  Y  F  T  T  I  A  K  R  A  T  S  P  Y  M  M  G  I  S  L  S  R  M  T  L  T  F  P  A  R :   Q  G  F  Q  V  L  V  Q  S  *  V  L  H  *  V  A  F  L  I  F  T  K  S  D  I  S  S  K  L  R  *  G  R  T  L  S  L  M  Q  R  R  N  L  E  L  L  Q  V  F  K  I  E  W  P  R  C  M  E  A  L  Y  I  W :   T  L  T  R  I  T  W  M  N  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0034H10.2" strand="-"/>
                <serials PGL_serial="17" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="74163" stop="74014"/>
                    <exon start="73529" stop="73341"/>
                    <exon start="73246" stop="73220"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>366</number_coding_nucleotides>
                  <number_encoded_amino_acids>122</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VNRLQNEGYYGGVRLLMAIVKIFHNYCKESNITLHDGNFTLSYDTNIPRQTGLSGSSAIVSAALSCLLDFYKVRHLIKVEVRPNLVLNAEKELGIVAGLQDRVAQVYGGVVYMDFDKNHMDE</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0034H10.2" strand="-"/>
                <serials PGL_serial="17" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="74633" stop="74430"/>
                    <exon start="74218" stop="74192"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>228</number_coding_nucleotides>
                  <number_encoded_amino_acids>76</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ATMAAVIEHKSYARVGLLGNPSDVYFGNTISFSLGNFWASVRLEPSIDLVIVPHPSHDLVQFNSISHLFYVDSLAG*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="74689" e_stop="74430"/>
            <exon e_start="74163" e_stop="74014"/>
            <exon e_start="73529" e_stop="73341"/>
            <exon e_start="73246" e_stop="73130"/>
            <exon e_start="72745" e_stop="72585"/>
            <exon e_start="71848" e_stop="71325"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.987" e_score="1.000"/>
          <exon-intron don_prob="0.976" acc_prob="0.871" e_score="1.000"/>
          <exon-intron don_prob="0.668" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.752" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="74689" e_stop="74430" e_length="260"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.987">
            <gDNA_intron_boundary i_start="74429" i_stop="74164" i_length="266"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="74163" e_stop="74014" e_length="150"/>
          </exon>
          <intron i_serial="2" don_prob="0.976" acc_prob="0.871">
            <gDNA_intron_boundary i_start="74013" i_stop="73530" i_length="484"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="73529" e_stop="73341" e_length="189"/>
          </exon>
          <intron i_serial="3" don_prob="0.668" acc_prob="1.000">
            <gDNA_intron_boundary i_start="73340" i_stop="73247" i_length="94"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="73246" e_stop="73130" e_length="117"/>
          </exon>
          <intron i_serial="4" don_prob="0.752" acc_prob="0.999">
            <gDNA_intron_boundary i_start="73129" i_stop="72746" i_length="384"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="72745" e_stop="72585" e_length="161"/>
          </exon>
          <intron i_serial="5" don_prob="0.994" acc_prob="0.999">
            <gDNA_intron_boundary i_start="72584" i_stop="71849" i_length="736"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="71848" e_stop="71325" e_length="524"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="74689" stop="74430"/>
              <exon start="74163" stop="74014"/>
              <exon start="73529" stop="73341"/>
              <exon start="73246" stop="73130"/>
              <exon start="72745" stop="72585"/>
              <exon start="71848" stop="71325"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U582213" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="17" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CAGTAGCTAACGATTAGATCTATAGATTCCAATTTCTGCAGTAACACCTACAATAAGCAACAATGGCGGCAGTGATCGAGCACAAGTCTTACGCTAGAGTTGGACTGCTTGGAAACCCTAGCGATGTTTATTTTGGGAACACTATATCCTTCAGCCTCGGGAATTTTTGGGCTTCTGTTCGTTTGGAACCTTCTATAGATCTCGTCATTGTTCCTCATCCTTCTCACGATCTCGTCCAATTCAATTCAATTTCTCACCTG : GTGAACAGGTTGCAGAATGAGGGGTACTATGGAGGGGTTCGTTTACTTATGGCAATCGTTAAAATATTTCACAACTATTGCAAAGAGAGCAACATCACCTTACATGATGGGAATTTCACTCTCTCGTATGACACTAACATTCCCCGCCAG : ACAGGGCTTTCAGGTTCTAGTGCAATCGTAAGTGCTGCACTGAGTTGCCTTCTTGATTTTTACAAAGTCAGACATCTCATCAAAGTTGAGGTAAGGCCGAACCTTGTCCTTAATGCAGAGAAGGAACTTGGAATTGTTGCAGGTCTTCAAGATAGAGTGGCCCAGGTGTATGGAGGCGTTGTATATATG : GACTTTGACAAGAATCACATGGATGAATTAGGTCATGGCATATATACACCCATGGATGTTGATCTTCTCCCACCTCTTTATCTGATCTATGCAGAAAATCCCAGTGATTCTGGAAAG : GTACATAGTACAGTTCGACAAAGATGGTTAGATGGTGATAAATTTATAAGATCAACCATTGAAGAGGTTGCAAATATAGCTGTGGAGGGACGGAAAGCTCTTCTTGAGAAGGACTACAATAAGTTAGCAGCCCTCATGAATCACAATTTTGACTTGAGAAG : GCGTATGTTTGGAGATAATGCCCTTGGAGCTATGAATATAGAGATGGTTGAAATCGCTCGAAAGGTAGGTGCTGCTTCCAAGTTCACAGGAAGTGGTGGGGCTGTGGTTGTGTACTGTCCGGATGGAACTTCACAAGTGAAGCAGCTGGAGGACGCATGCCACAAAGCTGGTTTCACTTTTCAACCAATTAAAGTTATGCCTTCGTTTCTAAACGAAACTGATCTTCAAACTCTGAAATCAAAGTGAAAATGATGATCTGCTTTCAAATATGTCGAGAGTCCTCTTTATTCTTTATTTCTTTCACCTTTCATTGGCATATGCTAAGCGCTTTTCACCAAGTATGTAGCGACCATTGAAAGAAATGCTAGTATAGATAGTTTTAGTTACAATTGTTTTGCTGCTATTGTAATGCATTTCGAGAAGCGCTTACTTTACAGTTTTAGCGTAAACCGTCATTAGATTCACATATTTTAACTCCAATTGTGTGATGCCAATTATAATTACTACTAAATCTGTTACTTCT</gDNA_template>
            <first_frame> Q  *  L  T  I  R  S  I  D  S  N  F  C  S  N  T  Y  N  K  Q  Q  W  R  Q  *  S  S  T  S  L  T  L  E  L  D  C  L  E  T  L  A  M  F  I  L  G  T  L  Y  P  S  A  S  G  I  F  G  L  L  F  V  W  N  L  L  *  I  S  S  L  F  L  I  L  L  T  I  S  S  N  S  I  Q  F  L  T  W :   *  T  G  C  R  M  R  G  T  M  E  G  F  V  Y  L  W  Q  S  L  K  Y  F  T  T  I  A  K  R  A  T  S  P  Y  M  M  G  I  S  L  S  R  M  T  L  T  F  P  A  R :   Q  G  F  Q  V  L  V  Q  S  *  V  L  H  *  V  A  F  L  I  F  T  K  S  D  I  S  S  K  L  R  *  G  R  T  L  S  L  M  Q  R  R  N  L  E  L  L  Q  V  F  K  I  E  W  P  R  C  M  E  A  L  Y  I  W :   T  L  T  R  I  T  W  M  N  *  V  M  A  Y  I  H  P  W  M  L  I  F  S  H  L  F  I  *  S  M  Q  K  I  P  V  I  L  E  R :   Y  I  V  Q  F  D  K  D  G  *  M  V  I  N  L  *  D  Q  P  L  K  R  L  Q  I  *  L  W  R  D  G  K  L  F  L  R  R  T  T  I  S  *  Q  P  S  *  I  T  I  L  T  *  E   : G  V  C  L  E  I  M  P  L  E  L  *  I  *  R  W  L  K  S  L  E  R  *  V  L  L  P  S  S  Q  E  V  V  G  L  W  L  C  T  V  R  M  E  L  H  K  *  S  S  W  R  T  H  A  T  K  L  V  S  L  F  N  Q  L  K  L  C  L  R  F  *  T  K  L  I  F  K  L  *  N  Q  S  E  N  D  D  L  L  S  N  M  S  R  V  L  F  I  L  Y  F  F  H  L  S  L  A  Y  A  K  R  F  S  P  S  M  *  R  P  L  K  E  M  L  V  *  I  V  L  V  T  I  V  L  L  L  L  *  C  I  S  R  S  A  Y  F  T  V  L  A  *  T  V  I  R  F  T  Y  F  N  S  N  C  V  M  P  I  I  I  T  T  K  S  V  T  S </first_frame>
            <second_frame>  S  S  *  R  L  D  L  *  I  P  I  S  A  V  T  P  T  I  S  N  N  G  G  S  D  R  A  Q  V  L  R  *  S  W  T  A  W  K  P  *  R  C  L  F  W  E  H  Y  I  L  Q  P  R  E  F  L  G  F  C  S  F  G  T  F  Y  R  S  R  H  C  S  S  S  F  S  R  S  R  P  I  Q  F  N  F  S  P   : G  E  Q  V  A  E  *  G  V  L  W  R  G  S  F  T  Y  G  N  R  *  N  I  S  Q  L  L  Q  R  E  Q  H  H  L  T  *  W  E  F  H  S  L  V  *  H  *  H  S  P  P   : D  R  A  F  R  F  *  C  N  R  K  C  C  T  E  L  P  S  *  F  L  Q  S  Q  T  S  H  Q  S  *  G  K  A  E  P  C  P  *  C  R  E  G  T  W  N  C  C  R  S  S  R  *  S  G  P  G  V  W  R  R  C  I  Y   : G  L  *  Q  E  S  H  G  *  I  R  S  W  H  I  Y  T  H  G  C  *  S  S  P  T  S  L  S  D  L  C  R  K  S  Q  *  F  W  K   : G  T  *  Y  S  S  T  K  M  V  R  W  *  *  I  Y  K  I  N  H  *  R  G  C  K  Y  S  C  G  G  T  E  S  S  S  *  E  G  L  Q  *  V  S  S  P  H  E  S  Q  F  *  L  E  K  :  A  Y  V  W  R  *  C  P  W  S  Y  E  Y  R  D  G  *  N  R  S  K  G  R  C  C  F  Q  V  H  R  K  W  W  G  C  G  C  V  L  S  G  W  N  F  T  S  E  A  A  G  G  R  M  P  Q  S  W  F  H  F  S  T  N  *  S  Y  A  F  V  S  K  R  N  *  S  S  N  S  E  I  K  V  K  M  M  I  C  F  Q  I  C  R  E  S  S  L  F  F  I  S  F  T  F  H  W  H  M  L  S  A  F  H  Q  V  C  S  D  H  *  K  K  C  *  Y  R  *  F  *  L  Q  L  F  C  C  Y  C  N  A  F  R  E  A  L  T  L  Q  F  *  R  K  P  S  L  D  S  H  I  L  T  P  I  V  *  C  Q  L  *  L  L  L  N  L  L  L   </second_frame>
            <third_frame>   V  A  N  D  *  I  Y  R  F  Q  F  L  Q  *  H  L  Q  *  A  T  M  A  A  V  I  E  H  K  S  Y  A  R  V  G  L  L  G  N  P  S  D  V  Y  F  G  N  T  I  S  F  S  L  G  N  F  W  A  S  V  R  L  E  P  S  I  D  L  V  I  V  P  H  P  S  H  D  L  V  Q  F  N  S  I  S  H  L  :  V  N  R  L  Q  N  E  G  Y  Y  G  G  V  R  L  L  M  A  I  V  K  I  F  H  N  Y  C  K  E  S  N  I  T  L  H  D  G  N  F  T  L  S  Y  D  T  N  I  P  R  Q  :  T  G  L  S  G  S  S  A  I  V  S  A  A  L  S  C  L  L  D  F  Y  K  V  R  H  L  I  K  V  E  V  R  P  N  L  V  L  N  A  E  K  E  L  G  I  V  A  G  L  Q  D  R  V  A  Q  V  Y  G  G  V  V  Y  M  :  D  F  D  K  N  H  M  D  E  L  G  H  G  I  Y  T  P  M  D  V  D  L  L  P  P  L  Y  L  I  Y  A  E  N  P  S  D  S  G  K  :  V  H  S  T  V  R  Q  R  W  L  D  G  D  K  F  I  R  S  T  I  E  E  V  A  N  I  A  V  E  G  R  K  A  L  L  E  K  D  Y  N  K  L  A  A  L  M  N  H  N  F  D  L  R  R :   R  M  F  G  D  N  A  L  G  A  M  N  I  E  M  V  E  I  A  R  K  V  G  A  A  S  K  F  T  G  S  G  G  A  V  V  V  Y  C  P  D  G  T  S  Q  V  K  Q  L  E  D  A  C  H  K  A  G  F  T  F  Q  P  I  K  V  M  P  S  F  L  N  E  T  D  L  Q  T  L  K  S  K  *  K  *  *  S  A  F  K  Y  V  E  S  P  L  Y  S  L  F  L  S  P  F  I  G  I  C  *  A  L  F  T  K  Y  V  A  T  I  E  R  N  A  S  I  D  S  F  S  Y  N  C  F  A  A  I  V  M  H  F  E  K  R  L  L  Y  S  F  S  V  N  R  H  *  I  H  I  F  *  L  Q  L  C  D  A  N  Y  N  Y  Y  *  I  C  Y  F  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0034H10.2" strand="-"/>
                <serials PGL_serial="17" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="74633" stop="74430"/>
                    <exon start="74163" stop="74014"/>
                    <exon start="73529" stop="73341"/>
                    <exon start="73246" stop="73130"/>
                    <exon start="72745" stop="72585"/>
                    <exon start="71848" stop="71602"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1065</number_coding_nucleotides>
                  <number_encoded_amino_acids>355</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ATMAAVIEHKSYARVGLLGNPSDVYFGNTISFSLGNFWASVRLEPSIDLVIVPHPSHDLVQFNSISHLVNRLQNEGYYGGVRLLMAIVKIFHNYCKESNITLHDGNFTLSYDTNIPRQTGLSGSSAIVSAALSCLLDFYKVRHLIKVEVRPNLVLNAEKELGIVAGLQDRVAQVYGGVVYMDFDKNHMDELGHGIYTPMDVDLLPPLYLIYAENPSDSGKVHSTVRQRWLDGDKFIRSTIEEVANIAVEGRKALLEKDYNKLAALMNHNFDLRRRMFGDNALGAMNIEMVEIARKVGAASKFTGSGGAVVVYCPDGTSQVKQLEDACHKAGFTFQPIKVMPSFLNETDLQTLKSK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="18" PGL_strand="+" PGL_start="88158" PGL_stop="90283"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="88158" e_stop="88641"/>
            <exon e_start="89129" e_stop="90283"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.966" e_score="1.000"/>
          <exon-only e_score="0.999"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="88158" e_stop="88641" e_length="484"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.966">
            <gDNA_intron_boundary i_start="88642" i_stop="89128" i_length="487"/>
          </intron>
          <exon e_serial="2" e_score="0.999">
            <gDNA_exon_boundary e_start="89129" e_stop="90283" e_length="1155"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88158" stop="88641"/>
              <exon start="89129" stop="90283"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U584150" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="18" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGGTGAAGGAGAAGATACAGCGTGGGTGGGGGGTGGGGGGTGGGGTTGCATCGTGTGTGTCTCTATATATAGTTTATCTGTAGAAAGAGTGTTGAATTAGAAGAAAAAGAAGAAGAACACAACAAACGGCTACAATTTAGCGTGTTTTTATATAGTCAAATTCAATCCACTAAGAAAAAAAAATTGTAAAATAACTTCCCCTCTCATTGATAATGGCAATTCCATTGCTGTAAATTTGAGAGGGAAGGGGGTTTCTTTTTTCTTCAGACAATCTCTCTTTTCATAATTCGTTTATTTTCTGAATTTTACAGAAGGTAACAAAAAATCTTGAAAAAGAGAGGAAAAAAATTGGAAGAAGCCAAAGTTTCATTGGCCATTTTTAGAGAAGGGGTTTGAAGAAATTATCTTGGTAGTGCTCATGGTGCCTGATATTTATTACCCTTCAAAGAAAAGCGACGATTTTTGTGAAGACGTTTGTGGCGAG : CAGTCTACCCCTGGAATAGTAAGCATGTCAAGATTAAGGTGTATGCTTCGAGGATTGGATTTAAAGGCTATTGTCTTCTTGGTTGTTTTTGTGCCATTATGTATAGTTGGTATATACTTGCATGGACAGAAGATTACCTACTTCCTCCGACCAATATGGCAATCTCCTCCAAAGCCCTTTATTGAACTTACCCATTATTATCATGAGAATGTCTCCATGGAGAATCTTTGCAAGCAACATGGATGGGGAATTCGTGAATATCCTAGGCGTGTCTATGATGCTGTTTTGTTTAGTAATGAAGTGGACATGCTTACTATCAGATGGAAGGAATTGTATCCTTACATCACACAGTTTGTTCTGCTCGAGTCAAACTCCACGTTTACTGGATTACCAAAACCATTTACTTTTGCTATTAACCGGGACCAATTTAAGTTTGTTGAGCCTCGATTGACTTATGGAACCATTGGAGGAAGATTCAGGAAAGGTGAAAATCCGTTTGTTGAAGAGGCATATCAGAGAGTAGCACTCGACCAGCTTTTGAGAATAGCTGGAATAGAGGATGATGATTTGCTGATAATGTCCGATGTTGATGAAATTCCTAGCAGGCACACCATCGATCTTTTAAGATGGTGTGATGACATTCCTCCAATTCTTCACCTTCATTTTAGGAATTACTTGTACTCTTTTGAATTTGAGCTTAAGCACAGAAGTTGGAGAGCTTCAGTCCACAGGTATCAGAGTGGCAAGACTCGATACGTACACTATCGTCAGACTGATTACCTTTTGGCAGATTCAGGTTGGCATTGTAGCTTTTGCTTCCGCCACATCTCTGACTTCATATTCAAAATGAAAGCTTACAGCCACACTGATAGAGTGAGGTTCTTGCATTATTTGAACCCTAGAAGAATACAAGATATCATTTGTGAAGGATCTGATTTATATGACATGCTTCCTGAGGAGTACACATTCAAGGATATCATTGGTAACATGGGACCTCTACCTCATTCTTACTCAGCCGTGCATCTTCCTGCGCATTTGCTGGATAATCCCGAGAAGTATAAGTATCTCTTGCCTGGGAACTGCAAAAGAGAAAGTGGCTAAGTTGTTACCACAAAGTTGGACGCATTTTCGTAACATAGGAGGTGTTCATGTGCC</gDNA_template>
            <first_frame> R  *  R  R  R  Y  S  V  G  G  G  W  G  V  G  L  H  R  V  C  L  Y  I  *  F  I  C  R  K  S  V  E  L  E  E  K  E  E  E  H  N  K  R  L  Q  F  S  V  F  L  Y  S  Q  I  Q  S  T  K  K  K  K  L  *  N  N  F  P  S  H  *  *  W  Q  F  H  C  C  K  F  E  R  E  G  G  F  F  F  L  Q  T  I  S  L  F  I  I  R  L  F  S  E  F  Y  R  R  *  Q  K  I  L  K  K  R  G  K  K  L  E  E  A  K  V  S  L  A  I  F  R  E  G  V  *  R  N  Y  L  G  S  A  H  G  A  *  Y  L  L  P  F  K  E  K  R  R  F  L  *  R  R  L  W  R   : A  V  Y  P  W  N  S  K  H  V  K  I  K  V  Y  A  S  R  I  G  F  K  G  Y  C  L  L  G  C  F  C  A  I  M  Y  S  W  Y  I  L  A  W  T  E  D  Y  L  L  P  P  T  N  M  A  I  S  S  K  A  L  Y  *  T  Y  P  L  L  S  *  E  C  L  H  G  E  S  L  Q  A  T  W  M  G  N  S  *  I  S  *  A  C  L  *  C  C  F  V  *  *  *  S  G  H  A  Y  Y  Q  M  E  G  I  V  S  L  H  H  T  V  C  S  A  R  V  K  L  H  V  Y  W  I  T  K  T  I  Y  F  C  Y  *  P  G  P  I  *  V  C  *  A  S  I  D  L  W  N  H  W  R  K  I  Q  E  R  *  K  S  V  C  *  R  G  I  S  E  S  S  T  R  P  A  F  E  N  S  W  N  R  G  *  *  F  A  D  N  V  R  C  *  *  N  S  *  Q  A  H  H  R  S  F  K  M  V  *  *  H  S  S  N  S  S  P  S  F  *  E  L  L  V  L  F  *  I  *  A  *  A  Q  K  L  E  S  F  S  P  Q  V  S  E  W  Q  D  S  I  R  T  L  S  S  D  *  L  P  F  G  R  F  R  L  A  L  *  L  L  L  P  P  H  L  *  L  H  I  Q  N  E  S  L  Q  P  H  *  *  S  E  V  L  A  L  F  E  P  *  K  N  T  R  Y  H  L  *  R  I  *  F  I  *  H  A  S  *  G  V  H  I  Q  G  Y  H  W  *  H  G  T  S  T  S  F  L  L  S  R  A  S  S  C  A  F  A  G  *  S  R  E  V  *  V  S  L  A  W  E  L  Q  K  R  K  W  L  S  C  Y  H  K  V  G  R  I  F  V  T  *  E  V  F  M  C  </first_frame>
            <second_frame>  G  E  G  E  D  T  A  W  V  G  G  G  G  W  G  C  I  V  C  V  S  I  Y  S  L  S  V  E  R  V  L  N  *  K  K  K  K  K  N  T  T  N  G  Y  N  L  A  C  F  Y  I  V  K  F  N  P  L  R  K  K  N  C  K  I  T  S  P  L  I  D  N  G  N  S  I  A  V  N  L  R  G  K  G  V  S  F  F  F  R  Q  S  L  F  S  *  F  V  Y  F  L  N  F  T  E  G  N  K  K  S  *  K  R  E  E  K  N  W  K  K  P  K  F  H  W  P  F  L  E  K  G  F  E  E  I  I  L  V  V  L  M  V  P  D  I  Y  Y  P  S  K  K  S  D  D  F  C  E  D  V  C  G  E  :  Q  S  T  P  G  I  V  S  M  S  R  L  R  C  M  L  R  G  L  D  L  K  A  I  V  F  L  V  V  F  V  P  L  C  I  V  G  I  Y  L  H  G  Q  K  I  T  Y  F  L  R  P  I  W  Q  S  P  P  K  P  F  I  E  L  T  H  Y  Y  H  E  N  V  S  M  E  N  L  C  K  Q  H  G  W  G  I  R  E  Y  P  R  R  V  Y  D  A  V  L  F  S  N  E  V  D  M  L  T  I  R  W  K  E  L  Y  P  Y  I  T  Q  F  V  L  L  E  S  N  S  T  F  T  G  L  P  K  P  F  T  F  A  I  N  R  D  Q  F  K  F  V  E  P  R  L  T  Y  G  T  I  G  G  R  F  R  K  G  E  N  P  F  V  E  E  A  Y  Q  R  V  A  L  D  Q  L  L  R  I  A  G  I  E  D  D  D  L  L  I  M  S  D  V  D  E  I  P  S  R  H  T  I  D  L  L  R  W  C  D  D  I  P  P  I  L  H  L  H  F  R  N  Y  L  Y  S  F  E  F  E  L  K  H  R  S  W  R  A  S  V  H  R  Y  Q  S  G  K  T  R  Y  V  H  Y  R  Q  T  D  Y  L  L  A  D  S  G  W  H  C  S  F  C  F  R  H  I  S  D  F  I  F  K  M  K  A  Y  S  H  T  D  R  V  R  F  L  H  Y  L  N  P  R  R  I  Q  D  I  I  C  E  G  S  D  L  Y  D  M  L  P  E  E  Y  T  F  K  D  I  I  G  N  M  G  P  L  P  H  S  Y  S  A  V  H  L  P  A  H  L  L  D  N  P  E  K  Y  K  Y  L  L  P  G  N  C  K  R  E  S  G  *  V  V  T  T  K  L  D  A  F  S  *  H  R  R  C  S  C  A </second_frame>
            <third_frame>   V  K  E  K  I  Q  R  G  W  G  V  G  G  G  V  A  S  C  V  S  L  Y  I  V  Y  L  *  K  E  C  *  I  R  R  K  R  R  R  T  Q  Q  T  A  T  I  *  R  V  F  I  *  S  N  S  I  H  *  E  K  K  I  V  K  *  L  P  L  S  L  I  M  A  I  P  L  L  *  I  *  E  G  R  G  F  L  F  S  S  D  N  L  S  F  H  N  S  F  I  F  *  I  L  Q  K  V  T  K  N  L  E  K  E  R  K  K  I  G  R  S  Q  S  F  I  G  H  F  *  R  R  G  L  K  K  L  S  W  *  C  S  W  C  L  I  F  I  T  L  Q  R  K  A  T  I  F  V  K  T  F  V  A  S :   S  L  P  L  E  *  *  A  C  Q  D  *  G  V  C  F  E  D  W  I  *  R  L  L  S  S  W  L  F  L  C  H  Y  V  *  L  V  Y  T  C  M  D  R  R  L  P  T  S  S  D  Q  Y  G  N  L  L  Q  S  P  L  L  N  L  P  I  I  I  M  R  M  S  P  W  R  I  F  A  S  N  M  D  G  E  F  V  N  I  L  G  V  S  M  M  L  F  C  L  V  M  K  W  T  C  L  L  S  D  G  R  N  C  I  L  T  S  H  S  L  F  C  S  S  Q  T  P  R  L  L  D  Y  Q  N  H  L  L  L  L  L  T  G  T  N  L  S  L  L  S  L  D  *  L  M  E  P  L  E  E  D  S  G  K  V  K  I  R  L  L  K  R  H  I  R  E  *  H  S  T  S  F  *  E  *  L  E  *  R  M  M  I  C  *  *  C  P  M  L  M  K  F  L  A  G  T  P  S  I  F  *  D  G  V  M  T  F  L  Q  F  F  T  F  I  L  G  I  T  C  T  L  L  N  L  S  L  S  T  E  V  G  E  L  Q  S  T  G  I  R  V  A  R  L  D  T  Y  T  I  V  R  L  I  T  F  W  Q  I  Q  V  G  I  V  A  F  A  S  A  T  S  L  T  S  Y  S  K  *  K  L  T  A  T  L  I  E  *  G  S  C  I  I  *  T  L  E  E  Y  K  I  S  F  V  K  D  L  I  Y  M  T  C  F  L  R  S  T  H  S  R  I  S  L  V  T  W  D  L  Y  L  I  L  T  Q  P  C  I  F  L  R  I  C  W  I  I  P  R  S  I  S  I  S  C  L  G  T  A  K  E  K  V  A  K  L  L  P  Q  S  W  T  H  F  R  N  I  G  G  V  H  V   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0034H10.2" strand="+"/>
                <serials PGL_serial="18" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="88489" stop="88641"/>
                    <exon start="89129" stop="90229"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1251</number_coding_nucleotides>
                  <number_encoded_amino_acids>417</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KREEKNWKKPKFHWPFLEKGFEEIILVVLMVPDIYYPSKKSDDFCEDVCGEQSTPGIVSMSRLRCMLRGLDLKAIVFLVVFVPLCIVGIYLHGQKITYFLRPIWQSPPKPFIELTHYYHENVSMENLCKQHGWGIREYPRRVYDAVLFSNEVDMLTIRWKELYPYITQFVLLESNSTFTGLPKPFTFAINRDQFKFVEPRLTYGTIGGRFRKGENPFVEEAYQRVALDQLLRIAGIEDDDLLIMSDVDEIPSRHTIDLLRWCDDIPPILHLHFRNYLYSFEFELKHRSWRASVHRYQSGKTRYVHYRQTDYLLADSGWHCSFCFRHISDFIFKMKAYSHTDRVRFLHYLNPRRIQDIICEGSDLYDMLPEEYTFKDIIGNMGPLPHSYSAVHLPAHLLDNPEKYKYLLPGNCKRESG*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="19" PGL_strand="-" PGL_start="94881" PGL_stop="91589"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="94881" e_stop="94819"/>
            <exon e_start="93985" e_stop="93853"/>
            <exon e_start="93655" e_stop="93469"/>
            <exon e_start="93197" e_stop="92701"/>
            <exon e_start="92529" e_stop="92227"/>
            <exon e_start="92135" e_stop="91589"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.909" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.985" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.958" e_score="0.995"/>
          <exon-intron don_prob="0.993" acc_prob="1.000" e_score="0.971"/>
          <exon-intron don_prob="0.999" acc_prob="0.991" e_score="1.000"/>
          <exon-only e_score="0.995"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="94881" e_stop="94819" e_length="63"/>
          </exon>
          <intron i_serial="1" don_prob="0.909" acc_prob="0.999">
            <gDNA_intron_boundary i_start="94818" i_stop="93986" i_length="833"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="93985" e_stop="93853" e_length="133"/>
          </exon>
          <intron i_serial="2" don_prob="0.985" acc_prob="0.992">
            <gDNA_intron_boundary i_start="93852" i_stop="93656" i_length="197"/>
          </intron>
          <exon e_serial="3" e_score="0.995">
            <gDNA_exon_boundary e_start="93655" e_stop="93469" e_length="187"/>
          </exon>
          <intron i_serial="3" don_prob="0.991" acc_prob="0.958">
            <gDNA_intron_boundary i_start="93468" i_stop="93198" i_length="271"/>
          </intron>
          <exon e_serial="4" e_score="0.971">
            <gDNA_exon_boundary e_start="93197" e_stop="92701" e_length="497"/>
          </exon>
          <intron i_serial="4" don_prob="0.993" acc_prob="1.000">
            <gDNA_intron_boundary i_start="92700" i_stop="92530" i_length="171"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="92529" e_stop="92227" e_length="303"/>
          </exon>
          <intron i_serial="5" don_prob="0.999" acc_prob="0.991">
            <gDNA_intron_boundary i_start="92226" i_stop="92136" i_length="91"/>
          </intron>
          <exon e_serial="6" e_score="0.995">
            <gDNA_exon_boundary e_start="92135" e_stop="91589" e_length="547"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94881" stop="94819"/>
              <exon start="93985" stop="93853"/>
              <exon start="93655" stop="93469"/>
              <exon start="93197" stop="92859"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U586918" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92925" stop="92701"/>
              <exon start="92529" stop="92227"/>
              <exon start="92135" stop="91589"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U574194" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="19" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAACTCAGATTCACCGAATTTTCTTCAAAAATCTTGAAATTTTTTTCGATCCTTTATGGGAAG : GTCTTGGCTTATTAATGGCAGAGGGCTTGCAAGTAAAGTTAAAAATGCCAGTGCCCCTGCTGCTCATCAAATCAAAGATTGTGGGGCAAAGCGGCAATGCCCAAACTGCAACTACTCTATTGATAACAAAGAT : GTTTCTCATGAATGGCCTGGTCTACCTGTTGGTGTGAAATTTGATCCATCTGATGCTGAGCTCGTGGAGCATTTAGAAGCAAAGTGTGGGGTGGGAAATTCAGAACAACACAAATTCATTGATGAGTTCATCCCGACCCTTGAGGTTCACGAAGGAATTTGCTACACCCATCCTGAAAATCTTCCTG : GTTCAAAAAAGGATGGAAGTAGCATTCACTTCTTTTATCGCATTACTAATGCATATGCAACTGGTAAACGGAAGCGTAGAAAGATTCATGATGAAAATAATTTGATGAAAGAACATGTCCGCTGGCACAAGACTGGAAAGACCAAGGTTGTTATGGAGAATGGATTCCAAAAGGGATGCAAGAAGGTCATGGTTCTCTATCAAACTCTTAAGAAGGGGTCGAAGCAGGAAAAGACTAATTGGGTAATGCATCAGTACCACCTGGGCCCTGATGAAGATGAAAAAGAAGGTGAATATGTGGTTTCAAAAATCTTTTACCAACAGCAGAAGCAATCTGTCAAGGCCAATGATTGTTGTGACAATGAGGAAGCCAGTGTGGGAGCGAATCAAACTGGGCCTACAACTCCCAAGACGGTTACACCCAATCCCCCTCGAGATGGAGAAACCCCTTCCTATGATGATATTTTAGATGAATCTTTACCCTTCTCACCTGATCAG : GAAGTGGAAGTTGCCAAAGAACCAGGGCAGCCTTCTGATGCTAAAATTAAGTGTGAGATGGAGTACTCCACATGCTTGGCTGGAGAATCACAAGCAGCTGATGCAAATGATGTTCATAATTCTCTGTTGTGTGATGAACATAATGATTATTCACTTCTTGATAGTTTTGGACCCAATCTTGGCCCTTCTGTTGACTACACTCATAGCACTTGCCATTTACCAGAAGTGAATGGTAACACAACCTGTGGAATTTCAGAATTGGATAACTTGGAACTGGATAGTCCTCCAGACTTCCAACTTGCA : GATTTGCCGTTTGGTTCTCAAGAGAATATCTTTAGTTGGTTGGACCGGCTATAGAGATGATGGCAATGAGATAATGCTTTATGCATTCTCGGATGGAGAATATACTTCAACAAGATTGTGTTCTTGAACAGCTACAGGAATCTTTCTTCAATTTCAGTTTTCGTGGTTTCAACAAATCCTTATCAAAAAATGCTCATTTTCCCACCATTACTACAGCCCACAGAAGAAAAGAAAACAGAAATATTGCTATATCTAAAATGCTGGACGATATACAAGTTGAAGGAGTTGTTGCAAGAACCTACTACAATATACCAAGGATCAACGTTTGGGAGTTGGAACTGTTACACCTTAGCTTATTGAATTGGCTCAAACTTTGATTTAATGTTCTGATTTCTCTTGTCAAGACTCTCATATCCCTTCTGTTCTATTCAGCATGTTCTGTTCTGACCCCCAAATACTTCGGGAAGTTTCTCGTTTGTGCTAGTTTATATTTTACTTGAAGTGTGGACAGGATTCTATTGCTTTCTTATGCATCTTTCATTGTCTG</gDNA_template>
            <first_frame> K  L  R  F  T  E  F  S  S  K  I  L  K  F  F  S  I  L  Y  G  K  :  V  L  A  Y  *  W  Q  R  A  C  K  *  S  *  K  C  Q  C  P  C  C  S  S  N  Q  R  L  W  G  K  A  A  M  P  K  L  Q  L  L  Y  *  *  Q  R   : C  F  S  *  M  A  W  S  T  C  W  C  E  I  *  S  I  *  C  *  A  R  G  A  F  R  S  K  V  W  G  G  K  F  R  T  T  Q  I  H  *  *  V  H  P  D  P  *  G  S  R  R  N  L  L  H  P  S  *  K  S  S  W :   F  K  K  G  W  K  *  H  S  L  L  L  S  H  Y  *  C  I  C  N  W  *  T  E  A  *  K  D  S  *  *  K  *  F  D  E  R  T  C  P  L  A  Q  D  W  K  D  Q  G  C  Y  G  E  W  I  P  K  G  M  Q  E  G  H  G  S  L  S  N  S  *  E  G  V  E  A  G  K  D  *  L  G  N  A  S  V  P  P  G  P  *  *  R  *  K  R  R  *  I  C  G  F  K  N  L  L  P  T  A  E  A  I  C  Q  G  Q  *  L  L  *  Q  *  G  S  Q  C  G  S  E  S  N  W  A  Y  N  S  Q  D  G  Y  T  Q  S  P  S  R  W  R  N  P  F  L  *  *  Y  F  R  *  I  F  T  L  L  T  *  S   : G  S  G  S  C  Q  R  T  R  A  A  F  *  C  *  N  *  V  *  D  G  V  L  H  M  L  G  W  R  I  T  S  S  *  C  K  *  C  S  *  F  S  V  V  *  *  T  *  *  L  F  T  S  *  *  F  W  T  Q  S  W  P  F  C  *  L  H  S  *  H  L  P  F  T  R  S  E  W  *  H  N  L  W  N  F  R  I  G  *  L  G  T  G  *  S  S  R  L  P  T  C   : R  F  A  V  W  F  S  R  E  Y  L  *  L  V  G  P  A  I  E  M  M  A  M  R  *  C  F  M  H  S  R  M  E  N  I  L  Q  Q  D  C  V  L  E  Q  L  Q  E  S  F  F  N  F  S  F  R  G  F  N  K  S  L  S  K  N  A  H  F  P  T  I  T  T  A  H  R  R  K  E  N  R  N  I  A  I  S  K  M  L  D  D  I  Q  V  E  G  V  V  A  R  T  Y  Y  N  I  P  R  I  N  V  W  E  L  E  L  L  H  L  S  L  L  N  W  L  K  L  *  F  N  V  L  I  S  L  V  K  T  L  I  S  L  L  F  Y  S  A  C  S  V  L  T  P  K  Y  F  G  K  F  L  V  C  A  S  L  Y  F  T  *  S  V  D  R  I  L  L  L  S  Y  A  S  F  I  V   </first_frame>
            <second_frame>  N  S  D  S  P  N  F  L  Q  K  S  *  N  F  F  R  S  F  M  G  R :   S  W  L  I  N  G  R  G  L  A  S  K  V  K  N  A  S  A  P  A  A  H  Q  I  K  D  C  G  A  K  R  Q  C  P  N  C  N  Y  S  I  D  N  K  D  :  V  S  H  E  W  P  G  L  P  V  G  V  K  F  D  P  S  D  A  E  L  V  E  H  L  E  A  K  C  G  V  G  N  S  E  Q  H  K  F  I  D  E  F  I  P  T  L  E  V  H  E  G  I  C  Y  T  H  P  E  N  L  P   : G  S  K  K  D  G  S  S  I  H  F  F  Y  R  I  T  N  A  Y  A  T  G  K  R  K  R  R  K  I  H  D  E  N  N  L  M  K  E  H  V  R  W  H  K  T  G  K  T  K  V  V  M  E  N  G  F  Q  K  G  C  K  K  V  M  V  L  Y  Q  T  L  K  K  G  S  K  Q  E  K  T  N  W  V  M  H  Q  Y  H  L  G  P  D  E  D  E  K  E  G  E  Y  V  V  S  K  I  F  Y  Q  Q  Q  K  Q  S  V  K  A  N  D  C  C  D  N  E  E  A  S  V  G  A  N  Q  T  G  P  T  T  P  K  T  V  T  P  N  P  P  R  D  G  E  T  P  S  Y  D  D  I  L  D  E  S  L  P  F  S  P  D  Q  :  E  V  E  V  A  K  E  P  G  Q  P  S  D  A  K  I  K  C  E  M  E  Y  S  T  C  L  A  G  E  S  Q  A  A  D  A  N  D  V  H  N  S  L  L  C  D  E  H  N  D  Y  S  L  L  D  S  F  G  P  N  L  G  P  S  V  D  Y  T  H  S  T  C  H  L  P  E  V  N  G  N  T  T  C  G  I  S  E  L  D  N  L  E  L  D  S  P  P  D  F  Q  L  A  :  D  L  P  F  G  S  Q  E  N  I  F  S  W  L  D  R  L  *  R  *  W  Q  *  D  N  A  L  C  I  L  G  W  R  I  Y  F  N  K  I  V  F  L  N  S  Y  R  N  L  S  S  I  S  V  F  V  V  S  T  N  P  Y  Q  K  M  L  I  F  P  P  L  L  Q  P  T  E  E  K  K  T  E  I  L  L  Y  L  K  C  W  T  I  Y  K  L  K  E  L  L  Q  E  P  T  T  I  Y  Q  G  S  T  F  G  S  W  N  C  Y  T  L  A  Y  *  I  G  S  N  F  D  L  M  F  *  F  L  L  S  R  L  S  Y  P  F  C  S  I  Q  H  V  L  F  *  P  P  N  T  S  G  S  F  S  F  V  L  V  Y  I  L  L  E  V  W  T  G  F  Y  C  F  L  M  H  L  S  L  S  </second_frame>
            <third_frame>   T  Q  I  H  R  I  F  F  K  N  L  E  I  F  F  D  P  L  W  E   : G  L  G  L  L  M  A  E  G  L  Q  V  K  L  K  M  P  V  P  L  L  L  I  K  S  K  I  V  G  Q  S  G  N  A  Q  T  A  T  T  L  L  I  T  K  M :   F  L  M  N  G  L  V  Y  L  L  V  *  N  L  I  H  L  M  L  S  S  W  S  I  *  K  Q  S  V  G  W  E  I  Q  N  N  T  N  S  L  M  S  S  S  R  P  L  R  F  T  K  E  F  A  T  P  I  L  K  I  F  L  :  V  Q  K  R  M  E  V  A  F  T  S  F  I  A  L  L  M  H  M  Q  L  V  N  G  S  V  E  R  F  M  M  K  I  I  *  *  K  N  M  S  A  G  T  R  L  E  R  P  R  L  L  W  R  M  D  S  K  R  D  A  R  R  S  W  F  S  I  K  L  L  R  R  G  R  S  R  K  R  L  I  G  *  C  I  S  T  T  W  A  L  M  K  M  K  K  K  V  N  M  W  F  Q  K  S  F  T  N  S  R  S  N  L  S  R  P  M  I  V  V  T  M  R  K  P  V  W  E  R  I  K  L  G  L  Q  L  P  R  R  L  H  P  I  P  L  E  M  E  K  P  L  P  M  M  I  F  *  M  N  L  Y  P  S  H  L  I  R :   K  W  K  L  P  K  N  Q  G  S  L  L  M  L  K  L  S  V  R  W  S  T  P  H  A  W  L  E  N  H  K  Q  L  M  Q  M  M  F  I  I  L  C  C  V  M  N  I  M  I  I  H  F  L  I  V  L  D  P  I  L  A  L  L  L  T  T  L  I  A  L  A  I  Y  Q  K  *  M  V  T  Q  P  V  E  F  Q  N  W  I  T  W  N  W  I  V  L  Q  T  S  N  L  Q :   I  C  R  L  V  L  K  R  I  S  L  V  G  W  T  G  Y  R  D  D  G  N  E  I  M  L  Y  A  F  S  D  G  E  Y  T  S  T  R  L  C  S  *  T  A  T  G  I  F  L  Q  F  Q  F  S  W  F  Q  Q  I  L  I  K  K  C  S  F  S  H  H  Y  Y  S  P  Q  K  K  R  K  Q  K  Y  C  Y  I  *  N  A  G  R  Y  T  S  *  R  S  C  C  K  N  L  L  Q  Y  T  K  D  Q  R  L  G  V  G  T  V  T  P  *  L  I  E  L  A  Q  T  L  I  *  C  S  D  F  S  C  Q  D  S  H  I  P  S  V  L  F  S  M  F  C  S  D  P  Q  I  L  R  E  V  S  R  L  C  *  F  I  F  Y  L  K  C  G  Q  D  S  I  A  F  L  C  I  F  H  C  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0034H10.2" strand="-"/>
                <serials PGL_serial="19" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="94844" stop="94819"/>
                    <exon start="93985" stop="93853"/>
                    <exon start="93655" stop="93469"/>
                    <exon start="93197" stop="92701"/>
                    <exon start="92529" stop="92227"/>
                    <exon start="92135" stop="92082"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1197</number_coding_nucleotides>
                  <number_encoded_amino_acids>399</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NFFRSFMGRSWLINGRGLASKVKNASAPAAHQIKDCGAKRQCPNCNYSIDNKDVSHEWPGLPVGVKFDPSDAELVEHLEAKCGVGNSEQHKFIDEFIPTLEVHEGICYTHPENLPGSKKDGSSIHFFYRITNAYATGKRKRRKIHDENNLMKEHVRWHKTGKTKVVMENGFQKGCKKVMVLYQTLKKGSKQEKTNWVMHQYHLGPDEDEKEGEYVVSKIFYQQQKQSVKANDCCDNEEASVGANQTGPTTPKTVTPNPPRDGETPSYDDILDESLPFSPDQEVEVAKEPGQPSDAKIKCEMEYSTCLAGESQAADANDVHNSLLCDEHNDYSLLDSFGPNLGPSVDYTHSTCHLPEVNGNTTCGISELDNLELDSPPDFQLADLPFGSQENIFSWLDRL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0034H10.2" strand="-"/>
                <serials PGL_serial="19" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="92061" stop="91759"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>300</number_coding_nucleotides>
                  <number_encoded_amino_acids>100</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CFMHSRMENILQQDCVLEQLQESFFNFSFRGFNKSLSKNAHFPTITTAHRRKENRNIAISKMLDDIQVEGVVARTYYNIPRINVWELELLHLSLLNWLKL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="20" PGL_strand="-" PGL_start="104023" PGL_stop="99920"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="104023" e_stop="103451"/>
            <exon e_start="102936" e_stop="102804"/>
            <exon e_start="102688" e_stop="102493"/>
            <exon e_start="101437" e_stop="101313"/>
            <exon e_start="101211" e_stop="101053"/>
            <exon e_start="100550" e_stop="99920"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.998" e_score="0.988"/>
          <exon-intron don_prob="0.760" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.991" e_score="0.990"/>
          <exon-intron don_prob="0.905" acc_prob="0.993" e_score="0.992"/>
          <exon-intron don_prob="1.000" acc_prob="1.000" e_score="0.981"/>
          <exon-only e_score="0.965"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.988">
            <gDNA_exon_boundary e_start="104023" e_stop="103451" e_length="573"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.998">
            <gDNA_intron_boundary i_start="103450" i_stop="102937" i_length="514"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="102936" e_stop="102804" e_length="133"/>
          </exon>
          <intron i_serial="2" don_prob="0.760" acc_prob="0.993">
            <gDNA_intron_boundary i_start="102803" i_stop="102689" i_length="115"/>
          </intron>
          <exon e_serial="3" e_score="0.990">
            <gDNA_exon_boundary e_start="102688" e_stop="102493" e_length="196"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="0.991">
            <gDNA_intron_boundary i_start="102492" i_stop="101438" i_length="1055"/>
          </intron>
          <exon e_serial="4" e_score="0.992">
            <gDNA_exon_boundary e_start="101437" e_stop="101313" e_length="125"/>
          </exon>
          <intron i_serial="4" don_prob="0.905" acc_prob="0.993">
            <gDNA_intron_boundary i_start="101312" i_stop="101212" i_length="101"/>
          </intron>
          <exon e_serial="5" e_score="0.981">
            <gDNA_exon_boundary e_start="101211" e_stop="101053" e_length="159"/>
          </exon>
          <intron i_serial="5" don_prob="1.000" acc_prob="1.000">
            <gDNA_intron_boundary i_start="101052" i_stop="100551" i_length="502"/>
          </intron>
          <exon e_serial="6" e_score="0.965">
            <gDNA_exon_boundary e_start="100550" e_stop="99920" e_length="631"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104023" stop="103451"/>
              <exon start="102936" stop="102804"/>
              <exon start="102688" stop="102493"/>
              <exon start="101437" stop="101313"/>
              <exon start="101211" stop="101053"/>
              <exon start="100550" stop="99920"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U568149" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="20" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CAACTAAAGTCTCCTAATTGCTTAACATTCATCTCTATCTTTCATTATCTTTCCTCTTATTCTACTCACTCTTCACCTTATTTATCTCTCTTTTTTCTTCTCCTCCTCCTGATAGCCTCAATTGATCCACCAACCAAACCAGCTGATCTACTTCTTCTGAACTTTTTATTTTTCAATTGAACCAGTAGGAATTTCTGGGGTTTCTTGTTTGTGGGGTTCATTTTTCTCTTGTTTTAAACACAAGGGCATGTTGTAGATTTGTTTCTGGTTTGTGGGTCTATGAGTTTTCTGGTTCTTGGTCATAAAGTCTTGAACTTTTTTTGCTGCTTCAAATGCTAGGTGAATTGTTATTAAGTGTTTCGAATTTGGTAGTTAAATAGATGTGCTACTAGTTCATTCTTGAAGTTATTATAGGGGGAGAGTATTTGGGGTCTGGAAAATGGGATCTGCTAATGGGTTTTACTCCGGAGAAGAAGAGTTCAATTTGGAGGCGAAATGGTTAATTGATCCGAAGCTTCTGTTCGTTGGTCCTAAGATTGGAGAGGGTGCTCATGCCAAAGTGTATGAGGGAAA : ATACAGAAACCAGAATGTAGCAATAAAGATTGTGCATAAAGGGGAGACACCTGAGGAGATTGCCAAGAGGGAATCTCGTTTTGGAAGGGAGGTTGCTATGTTATCCAGAGTTCAGCACAAGAACTTAGTGAAG : TTCATAGGAGCTTGCAAGGAGCCTGTCATGGTCATAGTAACTGAACTTCTTCTCGGGGGGACGCTGAGGAAATACTTGCTGAACCTGAGGCCAAGGTGCTTGGATACTGGTGTCGCTATTAGATTTGCCCTTGATATAGCCCGTGCAATGGAGTGCTTGCACTCTCATGGTATCATTCATCGCGACCTAAAACCTG : AGAACTTGCTTTTGACTGCGGACCACAAAACTGTCAAACTTGCGGATTTTGGTTTGGCAAGAGAAGAATCATTGACAGAGATGATGACTGCTGAAACTGGAACCTATCGCTGGATGGCTCCAGAG : CTCTACAGCACGGTCACTTTAAGACACGGCGAGAAGAAGCATTATAATCATAAAGTAGATGCCTACAGTTTTGCGATCGTTCTGTGGGAACTCGTACATAACAAATTACCATTTGAGGGCATGTCTAATTTACAGGCTGCTTATGCAGCTGCTTTTAAG : AATGTGAGACCAAGTGCAGATGATCTCCCCGAGGATTTGGCAGTAATTGTAACTTCGTGTTGGAAAGAGGATCCAAACACTCGTCCCAACTTCACTCAGATAATACAGATGCTTCTTCATTTTCTCTCTTCAGTTTCCCCTCCGGAACCAGTAATACCAGCTAGGATTTTCACTTCAGAGAATCATGTATTACCACCGGAGTCTCCAGGTACCAGCTCGTTAATGTCCAAGCGTGATGACTCGGTTGAGACCCCTAAAACACCCATGGAGAATCAGCCAAGAGGTTTCTTCTTCTGTTTTAACCAATGCTACTGATCCCCAAGGGAAAAGTTTGTTAATTCTCTAGAAAATACTCGGAGTTGAGCTATCTTATTATACAATAGTAAGCTCACAAAATGTTTAGCCCAGATATGTCACTAGATAACTTAGCTTTTGGTCTTTCTTCCACATAAGATAAAAAGGTACACTTTTGAGTTTTAGCCATGGTAATTCAAAGGTGAAGGACGTTGTTGCAGGAAGATGCATGATCTAGACTCGCGTTCTGACTTAATTGTGAGGAGTTGGGTTGCTGTGATGTATATTATAGTTGTAAAAAATAAGGTCCATCCAAAGACCTGTACTCCTATATTTT</gDNA_template>
            <first_frame> Q  L  K  S  P  N  C  L  T  F  I  S  I  F  H  Y  L  S  S  Y  S  T  H  S  S  P  Y  L  S  L  F  F  L  L  L  L  L  I  A  S  I  D  P  P  T  K  P  A  D  L  L  L  L  N  F  L  F  F  N  *  T  S  R  N  F  W  G  F  L  F  V  G  F  I  F  L  L  F  *  T  Q  G  H  V  V  D  L  F  L  V  C  G  S  M  S  F  L  V  L  G  H  K  V  L  N  F  F  C  C  F  K  C  *  V  N  C  Y  *  V  F  R  I  W  *  L  N  R  C  A  T  S  S  F  L  K  L  L  *  G  E  S  I  W  G  L  E  N  G  I  C  *  W  V  L  L  R  R  R  R  V  Q  F  G  G  E  M  V  N  *  S  E  A  S  V  R  W  S  *  D  W  R  G  C  S  C  Q  S  V  *  G  K  :  I  Q  K  P  E  C  S  N  K  D  C  A  *  R  G  D  T  *  G  D  C  Q  E  G  I  S  F  W  K  G  G  C  Y  V  I  Q  S  S  A  Q  E  L  S  E   : V  H  R  S  L  Q  G  A  C  H  G  H  S  N  *  T  S  S  R  G  D  A  E  E  I  L  A  E  P  E  A  K  V  L  G  Y  W  C  R  Y  *  I  C  P  *  Y  S  P  C  N  G  V  L  A  L  S  W  Y  H  S  S  R  P  K  T  * :   E  L  A  F  D  C  G  P  Q  N  C  Q  T  C  G  F  W  F  G  K  R  R  I  I  D  R  D  D  D  C  *  N  W  N  L  S  L  D  G  S  R   : A  L  Q  H  G  H  F  K  T  R  R  E  E  A  L  *  S  *  S  R  C  L  Q  F  C  D  R  S  V  G  T  R  T  *  Q  I  T  I  *  G  H  V  *  F  T  G  C  L  C  S  C  F  *   : E  C  E  T  K  C  R  *  S  P  R  G  F  G  S  N  C  N  F  V  L  E  R  G  S  K  H  S  S  Q  L  H  S  D  N  T  D  A  S  S  F  S  L  F  S  F  P  S  G  T  S  N  T  S  *  D  F  H  F  R  E  S  C  I  T  T  G  V  S  R  Y  Q  L  V  N  V  Q  A  *  *  L  G  *  D  P  *  N  T  H  G  E  S  A  K  R  F  L  L  L  F  *  P  M  L  L  I  P  K  G  K  V  C  *  F  S  R  K  Y  S  E  L  S  Y  L  I  I  Q  *  *  A  H  K  M  F  S  P  D  M  S  L  D  N  L  A  F  G  L  S  S  T  *  D  K  K  V  H  F  *  V  L  A  M  V  I  Q  R  *  R  T  L  L  Q  E  D  A  *  S  R  L  A  F  *  L  N  C  E  E  L  G  C  C  D  V  Y  Y  S  C  K  K  *  G  P  S  K  D  L  Y  S  Y  I   </first_frame>
            <second_frame>  N  *  S  L  L  I  A  *  H  S  S  L  S  F  I  I  F  P  L  I  L  L  T  L  H  L  I  Y  L  S  F  F  F  S  S  S  *  *  P  Q  L  I  H  Q  P  N  Q  L  I  Y  F  F  *  T  F  Y  F  S  I  E  P  V  G  I  S  G  V  S  C  L  W  G  S  F  F  S  C  F  K  H  K  G  M  L  *  I  C  F  W  F  V  G  L  *  V  F  W  F  L  V  I  K  S  *  T  F  F  A  A  S  N  A  R  *  I  V  I  K  C  F  E  F  G  S  *  I  D  V  L  L  V  H  S  *  S  Y  Y  R  G  R  V  F  G  V  W  K  M  G  S  A  N  G  F  Y  S  G  E  E  E  F  N  L  E  A  K  W  L  I  D  P  K  L  L  F  V  G  P  K  I  G  E  G  A  H  A  K  V  Y  E  G  K :   Y  R  N  Q  N  V  A  I  K  I  V  H  K  G  E  T  P  E  E  I  A  K  R  E  S  R  F  G  R  E  V  A  M  L  S  R  V  Q  H  K  N  L  V  K  :  F  I  G  A  C  K  E  P  V  M  V  I  V  T  E  L  L  L  G  G  T  L  R  K  Y  L  L  N  L  R  P  R  C  L  D  T  G  V  A  I  R  F  A  L  D  I  A  R  A  M  E  C  L  H  S  H  G  I  I  H  R  D  L  K  P   : E  N  L  L  L  T  A  D  H  K  T  V  K  L  A  D  F  G  L  A  R  E  E  S  L  T  E  M  M  T  A  E  T  G  T  Y  R  W  M  A  P  E  :  L  Y  S  T  V  T  L  R  H  G  E  K  K  H  Y  N  H  K  V  D  A  Y  S  F  A  I  V  L  W  E  L  V  H  N  K  L  P  F  E  G  M  S  N  L  Q  A  A  Y  A  A  A  F  K  :  N  V  R  P  S  A  D  D  L  P  E  D  L  A  V  I  V  T  S  C  W  K  E  D  P  N  T  R  P  N  F  T  Q  I  I  Q  M  L  L  H  F  L  S  S  V  S  P  P  E  P  V  I  P  A  R  I  F  T  S  E  N  H  V  L  P  P  E  S  P  G  T  S  S  L  M  S  K  R  D  D  S  V  E  T  P  K  T  P  M  E  N  Q  P  R  G  F  F  F  C  F  N  Q  C  Y  *  S  P  R  E  K  F  V  N  S  L  E  N  T  R  S  *  A  I  L  L  Y  N  S  K  L  T  K  C  L  A  Q  I  C  H  *  I  T  *  L  L  V  F  L  P  H  K  I  K  R  Y  T  F  E  F  *  P  W  *  F  K  G  E  G  R  C  C  R  K  M  H  D  L  D  S  R  S  D  L  I  V  R  S  W  V  A  V  M  Y  I  I  V  V  K  N  K  V  H  P  K  T  C  T  P  I  F  </second_frame>
            <third_frame>   T  K  V  S  *  L  L  N  I  H  L  Y  L  S  L  S  F  L  L  F  Y  S  L  F  T  L  F  I  S  L  F  S  S  P  P  P  D  S  L  N  *  S  T  N  Q  T  S  *  S  T  S  S  E  L  F  I  F  Q  L  N  Q  *  E  F  L  G  F  L  V  C  G  V  H  F  S  L  V  L  N  T  R  A  C  C  R  F  V  S  G  L  W  V  Y  E  F  S  G  S  W  S  *  S  L  E  L  F  L  L  L  Q  M  L  G  E  L  L  L  S  V  S  N  L  V  V  K  *  M  C  Y  *  F  I  L  E  V  I  I  G  G  E  Y  L  G  S  G  K  W  D  L  L  M  G  F  T  P  E  K  K  S  S  I  W  R  R  N  G  *  L  I  R  S  F  C  S  L  V  L  R  L  E  R  V  L  M  P  K  C  M  R  E   : N  T  E  T  R  M  *  Q  *  R  L  C  I  K  G  R  H  L  R  R  L  P  R  G  N  L  V  L  E  G  R  L  L  C  Y  P  E  F  S  T  R  T  *  *  S :   S  *  E  L  A  R  S  L  S  W  S  *  *  L  N  F  F  S  G  G  R  *  G  N  T  C  *  T  *  G  Q  G  A  W  I  L  V  S  L  L  D  L  P  L  I  *  P  V  Q  W  S  A  C  T  L  M  V  S  F  I  A  T  *  N  L  :  R  T  C  F  *  L  R  T  T  K  L  S  N  L  R  I  L  V  W  Q  E  K  N  H  *  Q  R  *  *  L  L  K  L  E  P  I  A  G  W  L  Q  S :   S  T  A  R  S  L  *  D  T  A  R  R  S  I  I  I  I  K  *  M  P  T  V  L  R  S  F  C  G  N  S  Y  I  T  N  Y  H  L  R  A  C  L  I  Y  R  L  L  M  Q  L  L  L  R :   M  *  D  Q  V  Q  M  I  S  P  R  I  W  Q  *  L  *  L  R  V  G  K  R  I  Q  T  L  V  P  T  S  L  R  *  Y  R  C  F  F  I  F  S  L  Q  F  P  L  R  N  Q  *  Y  Q  L  G  F  S  L  Q  R  I  M  Y  Y  H  R  S  L  Q  V  P  A  R  *  C  P  S  V  M  T  R  L  R  P  L  K  H  P  W  R  I  S  Q  E  V  S  S  S  V  L  T  N  A  T  D  P  Q  G  K  S  L  L  I  L  *  K  I  L  G  V  E  L  S  Y  Y  T  I  V  S  S  Q  N  V  *  P  R  Y  V  T  R  *  L  S  F  W  S  F  F  H  I  R  *  K  G  T  L  L  S  F  S  H  G  N  S  K  V  K  D  V  V  A  G  R  C  M  I  *  T  R  V  L  T  *  L  *  G  V  G  L  L  *  C  I  L  *  L  *  K  I  R  S  I  Q  R  P  V  L  L  Y  F </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0034H10.2" strand="-"/>
                <serials PGL_serial="20" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="103620" stop="103451"/>
                    <exon start="102936" stop="102804"/>
                    <exon start="102688" stop="102493"/>
                    <exon start="101437" stop="101313"/>
                    <exon start="101211" stop="101053"/>
                    <exon start="100550" stop="100236"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1095</number_coding_nucleotides>
                  <number_encoded_amino_acids>365</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SYYRGRVFGVWKMGSANGFYSGEEEFNLEAKWLIDPKLLFVGPKIGEGAHAKVYEGKYRNQNVAIKIVHKGETPEEIAKRESRFGREVAMLSRVQHKNLVKFIGACKEPVMVIVTELLLGGTLRKYLLNLRPRCLDTGVAIRFALDIARAMECLHSHGIIHRDLKPENLLLTADHKTVKLADFGLAREESLTEMMTAETGTYRWMAPELYSTVTLRHGEKKHYNHKVDAYSFAIVLWELVHNKLPFEGMSNLQAAYAAAFKNVRPSADDLPEDLAVIVTSCWKEDPNTRPNFTQIIQMLLHFLSSVSPPEPVIPARIFTSENHVLPPESPGTSSLMSKRDDSVETPKTPMENQPRGFFFCFNQCY*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="21" PGL_strand="+" PGL_start="108271" PGL_stop="109664"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="108271" e_stop="108565"/>
            <exon e_start="108641" e_stop="108730"/>
            <exon e_start="108807" e_stop="108871"/>
            <exon e_start="109042" e_stop="109085"/>
            <exon e_start="109401" e_stop="109664"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.997" acc_prob="0.967" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.984" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.899" acc_prob="0.839" e_score="1.000"/>
          <exon-only e_score="0.973"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="108271" e_stop="108565" e_length="295"/>
          </exon>
          <intron i_serial="1" don_prob="0.997" acc_prob="0.967">
            <gDNA_intron_boundary i_start="108566" i_stop="108640" i_length="75"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="108641" e_stop="108730" e_length="90"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.984">
            <gDNA_intron_boundary i_start="108731" i_stop="108806" i_length="76"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="108807" e_stop="108871" e_length="65"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="0.999">
            <gDNA_intron_boundary i_start="108872" i_stop="109041" i_length="170"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="109042" e_stop="109085" e_length="44"/>
          </exon>
          <intron i_serial="4" don_prob="0.899" acc_prob="0.839">
            <gDNA_intron_boundary i_start="109086" i_stop="109400" i_length="315"/>
          </intron>
          <exon e_serial="5" e_score="0.973">
            <gDNA_exon_boundary e_start="109401" e_stop="109664" e_length="264"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108271" stop="108565"/>
              <exon start="108641" stop="108730"/>
              <exon start="108807" stop="108871"/>
              <exon start="109042" stop="109085"/>
              <exon start="109401" stop="109664"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U599584" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="21" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GGCTCCGTCGATTTTGCCGCCGGGATGTATTCAACCGCCCGCCGTACTACCCTAGTTGACTATAATCAACGTCATTCGCCGTCGACGATCTCCAAATCGTCGTTGCAACTAATTCACTTGCGTAGAATTGTTTCTATTTCTCTTTTCGCTAAAAATAATCACCTTCCCAATAGATGCCGGCGAATGCGTACCATATCCGGCAGACATTTATCTTCTCATTCATCGGATTCTTCAAGCGACTATGAAAACCCGTTAAGTTGTGATTCAACTCACATTGACTCTGTACTGCGGCCAG : GTAATCTGCTGTCCAAAAGTGTTACATGGATTGGTGTTGCCACTATTACTAGCAAAGTTCTGGTGATTATTTCCTAATATGTTTTTAAAT : GGGTTATTGAGGGAAATTGTTATAGCTTCAGCTTTTGGCATTGGTCCTGTAGTAACTGCCTTCAG : GTATGCTTCGGTGCTGCCTGGTTTTGCTGCATCAGTTCTTGGTG : GTGTTAATGGCCCTATTCACATCACAATGACAACTACATTAAGGCTAGTTGCTATCTCTGTATGCTACTATCTTGAATCCTAAAGATGAATTCAGAGTGTTCTGCACTTTAACTGCTACAGAATTATTTTTACCAGGAGCCAAAGGCACCATATTCCTGTTGTCGCCATATTCATCTAAAGAAGCTTGCGATACTTGAATTTATGTGTCTCTACATGTGATAACCCAGGATTCTTTGTGCACAGTACCATAACATGACAAATTA</gDNA_template>
            <first_frame> G  S  V  D  F  A  A  G  M  Y  S  T  A  R  R  T  T  L  V  D  Y  N  Q  R  H  S  P  S  T  I  S  K  S  S  L  Q  L  I  H  L  R  R  I  V  S  I  S  L  F  A  K  N  N  H  L  P  N  R  C  R  R  M  R  T  I  S  G  R  H  L  S  S  H  S  S  D  S  S  S  D  Y  E  N  P  L  S  C  D  S  T  H  I  D  S  V  L  R  P   : G  N  L  L  S  K  S  V  T  W  I  G  V  A  T  I  T  S  K  V  L  V  I  I  S  *  Y  V  F  K   : W  V  I  E  G  N  C  Y  S  F  S  F  W  H  W  S  C  S  N  C  L  Q  :  V  C  F  G  A  A  W  F  C  C  I  S  S  W  W :   C  *  W  P  Y  S  H  H  N  D  N  Y  I  K  A  S  C  Y  L  C  M  L  L  S  *  I  L  K  M  N  S  E  C  S  A  L  *  L  L  Q  N  Y  F  Y  Q  E  P  K  A  P  Y  S  C  C  R  H  I  H  L  K  K  L  A  I  L  E  F  M  C  L  Y  M  *  *  P  R  I  L  C  A  Q  Y  H  N  M  T  N   </first_frame>
            <second_frame>  A  P  S  I  L  P  P  G  C  I  Q  P  P  A  V  L  P  *  L  T  I  I  N  V  I  R  R  R  R  S  P  N  R  R  C  N  *  F  T  C  V  E  L  F  L  F  L  F  S  L  K  I  I  T  F  P  I  D  A  G  E  C  V  P  Y  P  A  D  I  Y  L  L  I  H  R  I  L  Q  A  T  M  K  T  R  *  V  V  I  Q  L  T  L  T  L  Y  C  G  Q  :  V  I  C  C  P  K  V  L  H  G  L  V  L  P  L  L  L  A  K  F  W  *  L  F  P  N  M  F  L  N  :  G  L  L  R  E  I  V  I  A  S  A  F  G  I  G  P  V  V  T  A  F  R :   Y  A  S  V  L  P  G  F  A  A  S  V  L  G   : G  V  N  G  P  I  H  I  T  M  T  T  T  L  R  L  V  A  I  S  V  C  Y  Y  L  E  S  *  R  *  I  Q  S  V  L  H  F  N  C  Y  R  I  I  F  T  R  S  Q  R  H  H  I  P  V  V  A  I  F  I  *  R  S  L  R  Y  L  N  L  C  V  S  T  C  D  N  P  G  F  F  V  H  S  T  I  T  *  Q  I  </second_frame>
            <third_frame>   L  R  R  F  C  R  R  D  V  F  N  R  P  P  Y  Y  P  S  *  L  *  S  T  S  F  A  V  D  D  L  Q  I  V  V  A  T  N  S  L  A  *  N  C  F  Y  F  S  F  R  *  K  *  S  P  S  Q  *  M  P  A  N  A  Y  H  I  R  Q  T  F  I  F  S  F  I  G  F  F  K  R  L  *  K  P  V  K  L  *  F  N  S  H  *  L  C  T  A  A  R :   *  S  A  V  Q  K  C  Y  M  D  W  C  C  H  Y  Y  *  Q  S  S  G  D  Y  F  L  I  C  F  *  M :   G  Y  *  G  K  L  L  *  L  Q  L  L  A  L  V  L  *  *  L  P  S   : G  M  L  R  C  C  L  V  L  L  H  Q  F  L  V  :  V  L  M  A  L  F  T  S  Q  *  Q  L  H  *  G  *  L  L  S  L  Y  A  T  I  L  N  P  K  D  E  F  R  V  F  C  T  L  T  A  T  E  L  F  L  P  G  A  K  G  T  I  F  L  L  S  P  Y  S  S  K  E  A  C  D  T  *  I  Y  V  S  L  H  V  I  T  Q  D  S  L  C  T  V  P  *  H  D  K  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0034H10.2" strand="+"/>
                <serials PGL_serial="21" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="108271" stop="108565"/>
                    <exon start="108641" stop="108717"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>369</number_coding_nucleotides>
                  <number_encoded_amino_acids>123</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GSVDFAAGMYSTARRTTLVDYNQRHSPSTISKSSLQLIHLRRIVSISLFAKNNHLPNRCRRMRTISGRHLSSHSSDSSSDYENPLSCDSTHIDSVLRPGNLLSKSVTWIGVATITSKVLVIIS*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0034H10.2" strand="+"/>
                <serials PGL_serial="21" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="108707" stop="108730"/>
                    <exon start="108807" stop="108871"/>
                    <exon start="109042" stop="109085"/>
                    <exon start="109401" stop="109483"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>213</number_coding_nucleotides>
                  <number_encoded_amino_acids>71</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LFPNMFLNGLLREIVIASAFGIGPVVTAFRYASVLPGFAASVLGGVNGPIHITMTTTLRLVAISVCYYLES*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 37 chains have been computed
$ 
$ memory statistics:
$ 60800 bytes spliced alignments in total
$ 28 spliced alignments have been stored
$ 2171 bytes was the average size of a spliced alignment
$ 31392 bytes predicted gene locations in total
$ 21 predicted gene locations have been stored
$ 1494 bytes was the average size of a predicted gene location
$ 0 megabytes was the average size of the backtrace matrix
$ 40 backtrace matrices have been allocated
$ 
$ date finished: 2009-12-01 10:53:42
-->
