<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-12-01 11:04:31"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C02SLe0053H21-RnoJv/GenomeThreader_SGN_U_tomato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C02SLe0053H21-RnoJv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0053H21-RnoJv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U563566" ref_strand="+" ref_description="SGN-U563566 Tomato 200607#2 [2 ESTs aligned] (*GB) gi|217073810|gb|ACJ85265.1| (e_value=3e-58) unknown; (*SWP) sp|Q54II8|U553_DICDI (e_value=1e-18) UPF0553 protein OS=Dictyostelium discoideum GN=DDB_0266855; ">
      <seq>cccacgaggatcatgtgattgacatacacaagggacacaactggtcatcgacactatatcattatacaaacctttcggccttcacgtgagaggcttgaaacatgaacgcgaaatttcggttggtttgagaaggcgcaaaaacagtcctctattcttatgtcccttgtttttaactactactagggttttaatcttcaccggtggccgccatggaagaagttcggtctaccacagcttgggtcgctactcactcctctcatgtcaccgttgatttcacaggcattgagaaggttgctgaaaatatgaagaactcattaacaaaagtggagtgggattttgaagggattcactattttgataacgggccactcaccgtacagtatttgttggtcttggatacattgaatttctgtttctggccagatgaggagatgagttatgatcatctggaatccggattaaaggttactcttgaaagtgacaaatctgcatttgatgctgatcgtctacagaaatatactggtcctcaattaaggaaaatgttgaactggtcaaagaccattgcctttggaggatgaacgagtgcgcttattgcatgaggttgggcttgagcttgagaggagctttgagggaaaggcatctaaacttgtggagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0053H21-RnoJv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0053H21.1" temp_strand="+" temp_description="C02SLe0053H21.1  AC226516.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0053H21 sequenced_by:kribb upload_account_name:korea">
        <position start="2821" stop="5800"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="3093" g_stop="3357" g_length="265"/>
          <reference_exon_boundary r_type="cDNA" r_start="15" r_stop="279" r_length="265" r_score="0.928"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="3358" i_stop="3505" i_length="148">
            <donor d_prob="0.768" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="3506" g_stop="3649" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="280" r_stop="423" r_length="144" r_score="0.993"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="3650" i_stop="3999" i_length="350">
            <donor d_prob="0.319" d_score="0.98"/>
            <acceptor a_prob="0.993" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="4000" g_stop="4098" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="424" r_stop="522" r_length="99" r_score="0.990"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="4099" i_stop="5179" i_length="1081">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="5180" g_stop="5256" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="523" r_stop="600" r_length="78" r_score="0.974"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="5257" i_stop="5445" i_length="189">
            <donor d_prob="0.998" d_score="0.96"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="5446" g_stop="5500" g_length="55"/>
          <reference_exon_boundary r_type="cDNA" r_start="601" r_stop="655" r_length="55" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0053H21.1" gen_strand="+" ref_id="SGN-U563566" ref_strand="+">
        <total_alignment_score>0.964</total_alignment_score>
        <cumulative_length_of_scored_exons>640</cumulative_length_of_scored_exons>
        <coverage percentage="0.977" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0053H21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U563566" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="3093" e_stop="3357"/>
          <exon e_start="3506" e_stop="3649"/>
          <exon e_start="4000" e_stop="4098"/>
          <exon e_start="5180" e_stop="5256"/>
          <exon e_start="5446" e_stop="5500"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGAGTGAAATAGACAAGGGACCCAGGCGGTTAGTGATACTAGATCATTAGCCAGACTTTTCGGCCTTCACGTGGGAGGCTTGAAACATGAGCGCGAAATTTCGGTTGGTTTGAGAAGGCGCAAAAACAGTCCTCTATTCTTATGTCCCTTGTTTTTAACTACTACTAGGGTTTTAATCTTCTCCGGTGGCCGCCATGGAAGAAGTTCGGTCTACCACAGCTTGGGTCGCTACTCACTCCTCTCATGTCACCGTTGATTTCACAGGTCCCTCAGCATTCTCTCCGTGTTTCCCATTACGTTAATCCAATGCACTTCCGTTACTAATTTTCTTTTAATCTCAAATTATTTAGAGTCTGTTATTTGGCTTGTATTTGATAGTATAAGATTACATTTTGGTATGTGTTATATGCAGGCATTGAGAAGGTTGCTGAAAATATGAAGAACTCATTAACAAAAGTGGAGTGGGATTTTGAAGGGATTCACTATTTTGATAACGGGCCACTCACCGTTCAGTATTTGTTGGTCTTGGATACATTGAATTTCTGTTTCTGGCCAGGTACCTTAATAAGTTTATCGTTAAGGAAGCAGTAAACAGCCTTGTAAATTATTCAGATGCTAAACTTGTGAAATTGCTTTAATATTATTTGTCTTTAAGCTATATTTCTTATAAATGAATGACATAAGTGCTGGGAAACTTCAGTGTTGTACTTGGTCAAAATGTCAGAAGTATCTTCTAACTTTTTATCCTTGAACTCGCACATTTATGTTGATCAAGAAAATTTGTAATACAGAACCGTATTCATGATGCTTGTTAGGGCTTATTTAAAGGTTCTTATAGCAGTTTTTATTTCAGTTGTTTGAAAATATGCTCTGGTGTATTGACCTTTAACTTGCATCTAATTGCAGATGAGGAGATGAGTTATGATCATCTGGCATCCGGATTAAAGGTTACTCTTGAAAGTGACAAATCTGCATTTGATGCTGATCGTCTACAGAAATATACTGGTAAGCAGGTTTCTTTGAGACTCTGCCTTTTGGATTTTTTTTTTACTTTGCCTACTCCACCCATTGCGTGAGGAAAGCCTTCTAGTAGTGGCATGAGACTGTTGGCATCCAGTGATGCACTCGGGGGCTATGTGATGTTCACTGAACAGTCTCTCAATTCGTATATAAAAGTGGTCCCTTAAGAATGCGAATGATGTCCACTTTTTCTTTTGAATACCCATCTTATAATTTAATCCCTTTCAATCCAACTAACTACAATCTATGGGAATGCCTTTGTGATCATTAACTTTAAGGTCCTCATTTAACTATTACAAGTGAGGTAATCCAAGATCCAAAACTTGTTATCATTTTTTAGCCTTTAGTTAAAATTTTCTATTGTTGTTGAAGTAGCTCATTATTCGACAAAAAATATTGTGATAAATCCTAGTTTAGAATCTCTGGCATGACACTCACTCTCTTAAATCTTTAGAATTTAACTCCTATTGCAATTTATTCCACGTCTCAAGGTTAAGTCAGGAGATTGAAAAGAATTAAAATTTGATGCAGCAATAGAGACACATAAGATTAATAAAGTATAAAAGGGATCATAACTGATGTAGCAATAAAGACTCGTGAGATTAATAAACTATTAGGGCCAGAACAGAATAATTTTTTTTATGACAAGGGAAACCTGCAGCTGCTACTCTTCGGGTGCACACAAAATAAAACCCCTACTCATGTGCAATAGCTCGCAAACCACACAGGAGAGTAATCCGCATTAGAAAAGCCTGATGCGATAAGCTCGATGGGAAACCCCTTGCTTTTGCTGGCAAGGGGTTTCGAACTTGAGACCTCCAACATGGAAGTCCCAAGCCCAAACCACATGGCCACGGGCCATCCCAAAGGGTAGCTAGAGGAGAACATTACCTTGAAAGCATCTTCGTTGGTTATGTTTGTGTTCAGCAAGTCTTTATGTTAAGCAACTCACGGGTTCAATTTATATAGTTTGACAAATGTCTTGAATGTTTTGAGTTCTGAAATCTTATAACCTTTCCCTTTGTACTTGTTTGAAGATAATCTCATTGCAAACACCATTTTTTAGGTCCTCAATTAAGGAAAATGTTGAACTGGTC-AAGACCATTGCCTTTGGAGGATGAACGAGTGCGCTTATTGCATGAGGTACACTTCTTAATTCTTGATTTGGTGTTCTATGCACTCTTTTAATGCTTCGGCAGGTGATAATTATTTTTTTTTTGCATTATGTGCATTCTCTTAATGTTCAGAAGTCGTAATTTGCTGTGACTTATAATAATGTGTGATCTCTTAAGCTTGTTAGTGAGCTAATAGCTCTGTGGAATAATGGTTAAGGTTGGGCTTGAGCTTGAGAGGAGCTTTGAGGGAAAGGCATCTAAACTTGTGGAGT</genome_strand>
        <mrna_strand>GTGATTGACATACACAAGGGACACAACTGGTCATCGACACTATATCATTATACAAACCTTTCGGCCTTCACGTGAGAGGCTTGAAACATGAACGCGAAATTTCGGTTGGTTTGAGAAGGCGCAAAAACAGTCCTCTATTCTTATGTCCCTTGTTTTTAACTACTACTAGGGTTTTAATCTTCACCGGTGGCCGCCATGGAAGAAGTTCGGTCTACCACAGCTTGGGTCGCTACTCACTCCTCTCATGTCACCGTTGATTTCACAG....................................................................................................................................................GCATTGAGAAGGTTGCTGAAAATATGAAGAACTCATTAACAAAAGTGGAGTGGGATTTTGAAGGGATTCACTATTTTGATAACGGGCCACTCACCGTACAGTATTTGTTGGTCTTGGATACATTGAATTTCTGTTTCTGGCCAG..............................................................................................................................................................................................................................................................................................................................................................ATGAGGAGATGAGTTATGATCATCTGGAATCCGGATTAAAGGTTACTCTTGAAAGTGACAAATCTGCATTTGATGCTGATCGTCTACAGAAATATACTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCTCAATTAAGGAAAATGTTGAACTGGTCAAAGACCATTGCCTTTGGAGGATGAACGAGTGCGCTTATTGCATGAG.............................................................................................................................................................................................GTTGGGCTTGAGCTTGAGAGGAGCTTTGAGGGAAAGGCATCTAAACTTGTGGAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0053H21-RnoJv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U582589" ref_strand="-" ref_description="SGN-U582589 Tomato 200607#2 [3 ESTs aligned] (*GB) gi|147768860|emb|CAN78136.1| (e_value=1e-40) hypothetical; (*SWP) sp|Q54II8|U553_DICDI (e_value=2e-14) UPF0553 protein OS=Dictyostelium discoideum GN=DDB_0266855; ">
      <seq>aagacataagctcaataaccatatttgctgattatattgttccagctgtccttcagcaacttggagtgctgagatatcgttcttccctggataatattatcaagaaaaatactgaaattgtctcaggcagtgaggaggaagtagaactccgagcctgctctgtttatgctgtggagaaaataaaggagttgatcagtaaaaagactgggaagcaggtgttgagtgttgaactggatctctggttatgggcttttggcatacaatgcccatctcttcaacaccatcggacactctctatctattattgactatagtaattaagctccattttcattgcagtcttgcatacaattatggtcttgattttgggattttgacatttccacgtctagatgtaacagtacagaaattatacaggattattttctccttttggtggtgaatttacttttttcaaggagtgcagaggagaggttgattatccgtttatgcagttccttgtataatgttgatggggtcaacactcgggctgttgtggttagagttatggatgtatttgtttagatagaatttagtgtaggatgagttattagttattcaaatattatttatataagatttaattatgcacatatattagtcatgaaagatttagttggataggtattagtatgtagatctttttaaaaaaatggtaagcttattcttatttctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0053H21-RnoJv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0053H21.1" temp_strand="+" temp_description="C02SLe0053H21.1  AC226516.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0053H21 sequenced_by:kribb upload_account_name:korea">
        <position start="5455" stop="7900"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="5755" g_stop="5969" g_length="215"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="215" r_length="215" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="5970" i_stop="7101" i_length="1132">
            <donor d_prob="0.976" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="7102" g_stop="7600" g_length="499"/>
          <reference_exon_boundary r_type="cDNA" r_start="216" r_stop="715" r_length="500" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0053H21.1" gen_strand="+" ref_id="SGN-U582589" ref_strand="-">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>714</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0053H21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U582589" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="5755" e_stop="5969"/>
          <exon e_start="7102" e_stop="7600"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGACATAAGCTCAATAACCATATTTGCTGATTATATTGTTCCAGCTGTCCTTCAGCAACTTGGAGTGCTGAGATATCGTTCTTCCCTGGATAATATTATCAAGAAAAATACTGAAATTGTCTCAGGCAGTGAGGAGGAAGTAGAACTCCGAGCCTGCTCTGTTTATGCTGTGGAGAAAATAAAGGAGTTGATCAGTAAAAAGACTGGGAAGCAGGTTGGTCTTGCTCATTTCCATTGTTTTGATGTTCTTTAGTGGTTAGATTTGGTGATTGCTAACTTATACTCAGCCAATTTTGTTGAATGAATATGCATTTTTTTGCATGTGTAAAGCTTGACGTCTCTTATTGACAGGGCTATGAGGAAACGTGCAATATTTCATATACTTCACCCTAGAACAGTTATATCCCGAAGTTTGCAGATAAATGACTTCATGAAATAGAATAATCTACAATATAGAAAATCATTCTTTTAGCTTTAACAGTTGATCGGCTGGTATTAATTGAAATTCTGGCCATCTAGAGTGTTGGTTTTAGATATTTGATGCCTACTCTTCGATTTTAAAACATACAAGTCAACTTGTATGCTTTTTTTTTTTTACTTTCTAATATATAGTTATACCTATTGGAACAAGAAATCATCAAATGGAAATGTTAGAAACACATTCGTAAAAGTGAGCCTTCAAAAGGCAACAGGCAATCAAATTGCAGCTAACATGCCTACTCTAGCTAAGGTTAGAAATATATAGTTATTGCGCCAGCTAAGTTTTTTCTTACATCATGTTGATGTCTTGAGGTTAAATACAAGACTATAAAAAGGTGAGTTACATGTCCAATGGTTAAGGTAAGTTATATCTGAGCTGAGATCTATATACCTGATTTCATTGCTGGCAATAAATAAATAAAGGCTGCACTTGTCGGGGTGGCCCAATGGTTTGAGCTTGGGACTTCCATGTTGGAGGTCTCAAGTTCAAAACCCCTTGCCAGCGAAAGCAAATGGTTTGTTTTCTGGGTCAAGCTCGTCACACTAGGCTTGTCTAGTGCGGGTTACCTCTTCTATGTGATTTGCAAGCTATTGCACAAGAGTAGAGGTTTTACCCTGTGCACACTTAAAGGGTACTGGCTGTAGGTTTCCCTTGTCATCAAAAATAAAAATAAAGGCTGCTACTGTGGTTACTGTTAGTCTGACATGTAAGCTATGTTCCTTGCAAGATATTTGGTAGAATTTTTTCCTTTCTAATATTTATCAACTTGTTATTCCTGTGCTATGTGTATTCTAAAGTGAGTTCCCAATTTACTTTGTTTGAATGCCACTTTTACAAAAATGTGACATCTCATTTTGCTATACAGGTGTTGAGTGTTGAACTGGATCTCTGGTTATGGGCTTTTGGCATACAATGCCCATCTCTTCAACACCATCGGACACTCTCTATCTATTATTGACTATAGTAATTAAGCTCCATTTTCATTGCAGTCTTGCATACAATTATGGTCTTGATTTTGGGATTTTGACATTTCCACGTCTAGATGTAACAGTACAGAAATTATACAGGATTATTTTCTCCTCTTGGTGGTGAATTTACTTTTTTCAAGGAGTGCAGAGGAGAGGTTGATTATCCGTTTATGCAGTACCTTGTATAATGTTGATGGGCTCAACACTCGGGCTGTT-TGGTTAGAGTTATGGATGTATTCGTTTAGATAGAATTTAGTGTAGGATGAGTTATTAGTTATTCAAATATTAGTTATATAAGATTTAATTATGCACATATATTAGTCATGAAAGATTTAGTTAGATAGGTATTAGTATGTAGATCTTTTTAAAAAAATGGTAAGCTTATTCTTATTTCTT</genome_strand>
        <mrna_strand>AAGACATAAGCTCAATAACCATATTTGCTGATTATATTGTTCCAGCTGTCCTTCAGCAACTTGGAGTGCTGAGATATCGTTCTTCCCTGGATAATATTATCAAGAAAAATACTGAAATTGTCTCAGGCAGTGAGGAGGAAGTAGAACTCCGAGCCTGCTCTGTTTATGCTGTGGAGAAAATAAAGGAGTTGATCAGTAAAAAGACTGGGAAGCAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTTGAGTGTTGAACTGGATCTCTGGTTATGGGCTTTTGGCATACAATGCCCATCTCTTCAACACCATCGGACACTCTCTATCTATTATTGACTATAGTAATTAAGCTCCATTTTCATTGCAGTCTTGCATACAATTATGGTCTTGATTTTGGGATTTTGACATTTCCACGTCTAGATGTAACAGTACAGAAATTATACAGGATTATTTTCTCCTTTTGGTGGTGAATTTACTTTTTTCAAGGAGTGCAGAGGAGAGGTTGATTATCCGTTTATGCAGTTCCTTGTATAATGTTGATGGGGTCAACACTCGGGCTGTTGTGGTTAGAGTTATGGATGTATTTGTTTAGATAGAATTTAGTGTAGGATGAGTTATTAGTTATTCAAATATTATTTATATAAGATTTAATTATGCACATATATTAGTCATGAAAGATTTAGTTGGATAGGTATTAGTATGTAGATCTTTTTAAAAAAATGGTAAGCTTATTCTTATTTCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0053H21-RnoJv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U600879" ref_strand="+" ref_description="SGN-U600879 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>gcaggattcgtctgagtttccttatcaaatttaatgcaaacgatggttcattttagctctcaggatacatctcaggtcaatgtgtagtcaacgtttacacagtgaaggtccttctatatttctgatccacttatttccgtatattttctggacaaagaaaacggaaacctaatgtttgtttgaacttagtctcctagtttttacttatcaatcattcctgaactgataagagcatggggagtcaatagatgtacacgagacggggagtcaaaagaagagtggtactggacatagaatctgaagaatctaggatactatactcaatctcaccctggtgtctcgcattttattgatgttccattggttcctgataccactgataaatgctgtcttggagggtgccaaagttctccaacagtttgataagaagttaattccgattgtgtcaaacacaacgcttgctataattgatcaggtctattctggcctttgcatagtccaatatggccatactcggtttctcatgaatttccttataatacattgtagtctatagtattgcatggactactttaactatggtttcgtatgcttcatgtacatcagcaacatcaaaatacaacatcaaaatacagccattccgataatatgcatgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0053H21-RnoJv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0053H21.1" temp_strand="+" temp_description="C02SLe0053H21.1  AC226516.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0053H21 sequenced_by:kribb upload_account_name:korea">
        <position start="14184" stop="16056"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="14483" g_stop="14589" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="107" r_length="107" r_score="0.991"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="14590" i_stop="14678" i_length="89">
            <donor d_prob="0.730" d_score="1.00"/>
            <acceptor a_prob="0.940" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="14679" g_stop="14749" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="108" r_stop="178" r_length="71" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="14750" i_stop="14849" i_length="100">
            <donor d_prob="0.647" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="14850" g_stop="14948" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="179" r_stop="277" r_length="99" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="14949" i_stop="15377" i_length="429">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.570" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="15378" g_stop="15756" g_length="379"/>
          <reference_exon_boundary r_type="cDNA" r_start="278" r_stop="656" r_length="379" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0053H21.1" gen_strand="+" ref_id="SGN-U600879" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>656</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0053H21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U600879" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="14483" e_stop="14589"/>
          <exon e_start="14679" e_stop="14749"/>
          <exon e_start="14850" e_stop="14948"/>
          <exon e_start="15378" e_stop="15756"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAGGATTCGTCTGAGTTTCCTTATCAAATTTAATGCAAACGATGGTTCATTTTAGCTCTCAGGATACATCTCAGGTCAATGTGTAGTCAACGTTTACACAGTGAAGGTATACAGGTCTAAACTGATGGATAAGAGATGTGAATATGCTATCTTTTCTTCTCTTTGTTTCCCTAACAATCACTGTTTAATTTGCAGGTCCTTCTATATTTCTGATCCACTTATTTCCGTATATTTTCTGGACAAAGAAAACGGAAACCTAATGTTTGGTTAGCATTTACTATATCATACATACTTGTTTTTCTGATTGGAGTGTTGTATTTCATATTCCAATGTATTTGCTGCTTCTAAGACCTACAATTCTTCCAGTTTGAACTTAGTCTCCTAGTTTTTACTTATCAATCATTCCTGAACTGATAAGAGCATGGGGAGTCAATAGATGTACACGAGACGGGGAGTCAAAAGAAGGTAAAACAATTCTTGTATTTGTTGCTGACCTGAATAAGAGCTGAATTGTTCTAATGCATGTGTCAATTAATTAGTTTCATTTCTTTCATCCACTTTTCAAGATTATCTTAGACTGCATTTTTATTAACCATGAAAGCATTAGATATTATAATGTCTTTTTCTAAGTTTTGTAACTACATAGTTTCTTCCAAATTCTATCTTGCTTATGTTCTGATCTTGTAATAGAATTGTCATGCCGGACATTTTTTATTCAAATTTTCAGAATTTGCACCAACAAAATCTCAAAGTTTCTTTGTTTATGGGACAAATGGAGGGACTTCCGTCTTGATATTATAGTTGAGTACCTTAGCTATATCTCGGAATGTTTTTGCGTCTTCTCCTCTAATTTGTTAAGATGATGGAGTTTTTTTTTTCCAATATGAGATGCAGAGTGGTACTGGACATAGAATCTGAAGAATCTAGGATACTATACTCAATCTCACCCTGGTGTCTCGCATTTTATTGATGTTCCATTGGTTCCTGATACCACTGATAAATGCTGTCTTGGAGGGTGCCAAAGTTCTCCAACAGTTTGATAAGAAGTTAATTCCGATTGTGTCAAACACAACGCTTGCTATAATTGATCAGGTCTATTCTGGCCTTTGCATAGTCCAATATGGCCATACTCGGTTTCTCATGAATTTCCTTATAATACATTGTAGTCTATAGTATTGCATGGACTACTTTAACTATGGTTTCGTATGCTTCATGTACATCAGCAACATCAAAATACAACATCAAAATACAGCCATTCCGATAATATGCATGC</genome_strand>
        <mrna_strand>GCAGGATTCGTCTGAGTTTCCTTATCAAATTTAATGCAAACGATGGTTCATTTTAGCTCTCAGGATACATCTCAGGTCAATGTGTAGTCAACGTTTACACAGTGAAG.........................................................................................GTCCTTCTATATTTCTGATCCACTTATTTCCGTATATTTTCTGGACAAAGAAAACGGAAACCTAATGTTTG....................................................................................................TTTGAACTTAGTCTCCTAGTTTTTACTTATCAATCATTCCTGAACTGATAAGAGCATGGGGAGTCAATAGATGTACACGAGACGGGGAGTCAAAAGAAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGGTACTGGACATAGAATCTGAAGAATCTAGGATACTATACTCAATCTCACCCTGGTGTCTCGCATTTTATTGATGTTCCATTGGTTCCTGATACCACTGATAAATGCTGTCTTGGAGGGTGCCAAAGTTCTCCAACAGTTTGATAAGAAGTTAATTCCGATTGTGTCAAACACAACGCTTGCTATAATTGATCAGGTCTATTCTGGCCTTTGCATAGTCCAATATGGCCATACTCGGTTTCTCATGAATTTCCTTATAATACATTGTAGTCTATAGTATTGCATGGACTACTTTAACTATGGTTTCGTATGCTTCATGTACATCAGCAACATCAAAATACAACATCAAAATACAGCCATTCCGATAATATGCATGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0053H21-RnoJv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U602640" ref_strand="+" ref_description="SGN-U602640 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>gttttttaaggtattcctattttccttgacccttgtaatgcagatatcaattccaaaggaccatacataatattacttgattacatagctatgagttttgacggtgcttttgacattgagaagcaaagtagatctcggatatatccacttttttgttgaaccgcaactgcccaagatctttgtatgattcgactttggagccttcaaagacctctgtggtatttaagagcttcgtgaagcggagatggaattggggagagatcaaatagccctagctagattctcaagcttggattcaccccaaaaggtcgaaaagcccttctttaagctttcttattcgctttttagcgcataacttactctctcacttatattcaagatacatggtatttgttcaaagttcatgataagttagaatatgggtaggaattttccaccaattggactatctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0053H21-RnoJv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0053H21.1" temp_strand="+" temp_description="C02SLe0053H21.1  AC226516.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0053H21 sequenced_by:kribb upload_account_name:korea">
        <position start="16448" stop="25673"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16748" g_stop="16973" g_length="226"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="227" r_length="227" r_score="0.991"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16974" i_stop="25148" i_length="8175">
            <donor d_prob="0.882" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="25149" g_stop="25373" g_length="225"/>
          <reference_exon_boundary r_type="cDNA" r_start="228" r_stop="452" r_length="225" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0053H21.1" gen_strand="+" ref_id="SGN-U602640" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>451</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0053H21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U602640" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16748" e_stop="16973"/>
          <exon e_start="25149" e_stop="25373"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTTTTAAGGTATTCCTATTTTCCTTGACCCTTGTAATGCAGATATCAATTCCAAAGGACCATACATAA-ATTACTTGATTACATAGCTATGAGTTTTGACGGTGCTTTTGACATTGAGAAGCAAAGTAGATCTCGGATATATCCACTTTTTTGTTGAACCGCAACTGCCCAAGATCTTTGTATGATTCGACTTTGGAGCCTTCAAAGACCTCTGTGGTATTTAAGGTGAGATTTTTTGTTGAAATTTTATGGTTTAATTTGTTTTGGGGTTAGGAAACAAATGTGAGGCTTTGGATTTATTTTATAGAATTGTGTTTATGTTGGTGTTTGTTTTGTGAGAATTGGTTTGAGTTGTTTTCTATAAAACAATATTTCAAAACACCTAATCATTTTTTGGAACTTCAATATGAGTGAAATTAATAGATTAAAAGTGGCTAAACCATTATTTATTATTAAATCCTATTGGATTACAAAGCATTAAAAGGAACCCCTGACCCCAGCAAGGTCCTTGCATCACAGCTGTTCCCTGAGAACAAAATAATCCCTTTGTTTTGGGAGAACAATGCTAAACCACATTTCTAATCTTCTTTTGGTTTCAAAACCAAACAGGCCAATGTAAACAAGGACATGTCATACATTTGTTTTACTGATTGGAGTACTGTATTTCATAGTACAATGTGCTGTTGTTTCCTGATACTGATAATTCTTCCAGTTTGAACTTAAGTCTCATGGTTTTTGCTTACCCAATCATTTCTGCTTCCTTTAAATGGATTTTGCGGTTTTTAAAAATAATTTACATCAATCTTCTTGGAGCCTTGTTATCATTAAGAAATGGTGAAATCCAGCTATATAATGATTTTTTGATTTCTGATCTAGTATTTTTTGAAATGATATGGTTCTTTGTTGTTCCTCTCTGATTTCTTGGAATTCCTAATAGAAATTTATTGCATACATCGGTAATGCTTGTTAATAAGCTTGTGATAGTTTTGTCACTGCACCACAAGAAGAATATTTGTCATGGGATGTATATTTTTCCCACAAGTATCAATTTTAGATTTTACTTGCCCCAGGGCTTTGGTAAGTGATGAGGACTCAAAAACGGGATTGTGATAGGGAGAATGCCACAAATTTGTTGAATCCTATCATCGACAATGAACCTGATATTTTAGTGGGATCTGGGTAAGGAGGTGGCTCGTATTCTCAGGAGTTTTTAACTTGTAGGTCAATCTGGGCCATTTGATATCACCATAAAATTTTCTGTTATTCAGAAAAAATTTGAGCCCAACCAGAATATTTAGGTTGATCTTCACTCTTCCGCTGCGTAGGTGGGAAACACAGCTTTGACCTATAAATATGCTAACAGTGTTGATCTTTGGCATTATTCTAGAGACTCATTAGCTTTTGAGGATACCTTTTTATGTATCCTTTCAAAAGGTATCAATGTACCTCCTTCATTTTACCAAGGCAATGAAGAAGTTCTTTGCCCCGAGTGAGACTTCAAGAAAGGCAGCAGGAAATAATAATATTAAGACTGTTCATGATGTGCTACTCATGCCAGATAATTTGTCCTTTAGTTCTTGTTTGTATTAATATAAATCAATGGGAACTCGCATAAATGGATTGATGCTGGAAATTGAGGTAAAACAGATGAGCTTATAAGGCAAAAAGATTAAGACTGTTCATGATGTGATGCGAGTGAGTCTTCAATAAAGGCTGGACGAAATAACTATGTTAAGAATGTTTATGTCTTCATGATGTGCCGCTCATACCCTAAGTTGCTCAGACTCTCCAAATATGTTGCTGCACCCATGTGGACTCCTCCAAAATTGCACCACTTTTGAAGGATCTGACACGCACTCGATGACATTTTTGAAGAGTCCGAGAAACATAGCTCATACCAGGCAATTTTTCCTTGAGTGCTTGTTTGTGTTATAATCAATGATGACAGAAAAGGTGTACAACTAATTAATGTTCTTTTCTATCATGCAGCAACTTGAGCAGTATGGAGACTACATCATTCTGCAGAAGCTATCTGCTCGGAGCTTATACAGTTGTCATCCCAACAGTGTGATCCGTATACTTCAGCTAGAACAATTATTTCCTAATTTGCAGATAGATGACTTCATGAACTAGACTAATCTACAATATAAAAAATCATCCTTTTAGTTTTAACAGTTATACAACTGACATTAATTTAAATCCTGGCCATCTAAAGTGTTGGTGTTGGATATTTGATGCGTACTCTTTGATTTAATACCAAATCGAGTAAGGAATTTTCCATTTATATGGTTTTTTTTACTTTCTAATATATAGTTATTGCCTATTGGAACAAGAAATCATCAAATGGAAAATATTAGAAAAACAGTAGTAAAAGTGAGGGCATCGAAAGGCAATAGGCAAACAAATTGCAGCTAACATGCCTACTCCAGCTAAGGTTAGAACATGTAGTTACTGCTCCAGCCAAGGTTTTGGATTATATCATGTTGATGTCTTAAGGTAAAATACAAGAAAAAATTTGAAAAAGTGAGTTACATGTCCAATGTTTAAGGTAGTTTATATCTGAGCTGAGATCTATATACCTGATTTCATTATACAAGCAATAAATAAATAAAGGCTGCTAGTGTGGTTACTGTTAGTCTGAAATGTAACCTGTGTTCCTTGCAAGATATTATTTGGTAGAACTTCCTTCCTAAATTTATTAACTTGGTTATTGCTGTTCTGTGTGTATTCCAAAGTGAGTTTCCAATTTTTCCAGTTTTCTTTGTTTGAATGTCATTTTCACTAAAATGTGACGACATCTCGTTTTGCTATCTAGGTGTTGAATGTGGAACTGGATCTTTGGTTATGGGCTTTTGGCATATGCTCATCTCTTCAACACCACCGGACACTATCTATCTATTATTGACTATAAAAATTAAGCTCCATTTCCATTGCAGTCTTGCATTCAAATGATGGTTCTGGTTTTGGGATTTTCACATTTACATGTCTAGGCGAAATATTACAGAAACTATACAGGATTATTTTCTCCTCCTAGTGGTGGATTTACTTTCTTTAAGGAGTGCAGAGGTTGAATATCAGTTATTTAACCTCTTTCAATCTCATTGAATTTCTGTAAGTTGGCCTACATACATATTTTGTTTTATTTTATTTTTATGGTAAATGTTGGCTGGAGATGTGCCTCACTTTTTGCTGAATTGGTCTTATTTATCCTGTGTTTTTTGTTGCCTTTGACTGTTGTCATGATTTATTTTTTTTTATGTTGGAGACATTTCTGTGAGAATCCTTTTTAAACCTCATTTGCTTCATGGACTCTGGAAAATACGTTACTCTTTCCTATTTATAAAATACGTCAATGTTTTAACTCTGAAAATTCACGAGAGGCAGCAACATTAGGATGATTAGTCCAAGTATGAAGTTTACCATGTTCCGATTTAAAAATTATTTATGGTCTCACTGGTGATACCGAGCTATTACATTTTCAAGAACATGTCTACATCTTTAGATGTTAAGAAGGTCTAGTTAGGCTTCATGCATCTCACCTTTGCTTCTTTCAACTTGGTCATACAATTCCAGCAGTAGCTGTACATGCATATACCATGCTCAAGAGCTAGCATCCATGTTGCAGCTGCTCCCTTGTTGATGGAGCAAAGGATTTTTGGTGATTGGCAGGTTTCCATCATAAGTACATTGTGGAATTCCTGGATTCCTTATAAGCCTTGGCCCAAGGGGCACTTTATTGACCTTTGGGCGAATATCCTGCATCAAACAAGTGATTCTGTTGGAATAAAACAGAACTTCCTGCTCATGAAAACCAGCAATAGAGGCCGATTTCTTAGAACCAGGTTTAAATAGTTCTAGATCAATTTCAGTTACCTGTATCTATTATTTTTAATTACCCACATAATGTGGTTTCATTCGACACTTGCAAGGAATTTCAGTCCTGATCATGTGATAAACATTGATTTTGATTCTAAGAGGATATAAGATCGTGTCGGACTAGACTGCTTACTTTATCTTCCATGAATAAGAAATGAGAAAACTATTTGTGTGTGCAGCTTATTTGTCCGATAATCCAATAAGGTATTTAAATAAGCATAGCACTGGGGGAAAAAAGCCATCTTAGAAAGAAATTTGGAGGAAAAGTTTAGAAGGAAAAGATTATGTAGAGACTGAAGCAACTTGTAAGCCTTTTAAGTCATTAGTATTTAGAATTATGTGATGAGCATTGAACAAAATCTCATCTTCGTAGTTATTTGTCCCCAGCACAAGAAGATTCAGAAATCAGAAGGAAATGTGTACCATGACTTACTAATTCAGCTATAGGCTTATAAACTGTATCAGAAAAGATATTTATTTTGCTTGTGTGAACTCCAAAGGTATTTAGTAAAAGATGCGACTCCTTCGATACACAATCCTTATTAGTATTATTGTTATTTATTTTTGTTTCAGATTAGGAACCGGAAAAAACAAATTCATTGCTTGCTAGTTGTTCTTAGAGATGCAACTTAACCGGCGCTTAGACACATCCAAACTCAAGGTATTTCTGAGAAAAGCAATATAACAGACCTAGAGATGCGTCCCAAACTTGGTTATCTCCAGTGTTCGTATATGGAAAATATTTCTTTTAAAAGAACATTGGACATGAGATAAACTTGGTTATCTCCAGAGTTCGTACATGCAGAATATTTCTTTTAAAGAACATTGGACATAAGATTGTAGAGGAACATTGACTTTGGTTAGCTCATTCGTCTATGGTTTCTTCCATGTGTGCTTCCTACTGACTTCCATGAGCTTCTTAGAATTGTTCTTGCGGATATTTATTGCCTCTAGCTTAATCTGGTGAAAGATATTTTACTGATTGATCTACTTCAGATAACTGAACAATTTCACCAATTCCTTCTTCCATTTGCTCGTCTAGCCCATCTGTTGTCAATAAGCTGGTAAAAATTTCCTAGTGATGATGTATCTTGTCATAGCTGGCTTCTCTAAAGTTACATATATATTCATGTGCTGATTACTGATATTATGCTATAGATTGTAGTTCTACCTACTAAAATAGCTTGGATTTCAGTCATTGCATAGAATTATTAGTTTGCAGTTGCTATCAGAGAGGATGTTCCTATAAGATGCCTTGACTTAGTATGATATTTCCATTGATTACTCCATGCTTAATAATAGCTCAGTGCCCCAGAAGATATAGAAATTTCAGATATTGGAATCACATTTATTGGACCTGTAGGTTGCAACTCTTATATTATCTTTAATTGAACCCTGAGAAGTACTAGTACCTGGTCAAAAATAGCTGTTGGGATGGCAAGGGTGGCAACAGCATTGGGGGCATCAACAATTCCTGAAATCCTTCCTTCGCATGGACAGCACGAAAGTAAAAGATAAACCTGATAGCACCAGCATAATGTTTATATCAGCAATTCCTGAATGTTAATGTTATCTGTTCCCGAGAGTATTCTGTTACAAGAAGATTTTCGGGGAGAGTTTTAATACCTGTTCCTTTGAGTAGCCAAATTTTGAGAGGTAATCAATTGCATTTAGTACTGCACGCTTGTATGCAACACTGGCATCAAGATAGTGTTGTTGTCCACTTTCATCTACACTGATGCCCTCAAACACCAACCACTCCGAGAATCTTGGCTCCATGGGTCCTATCTCAAAAATTGGGTTCACATGTAGTGATGTGGGTCCCATTGGAGTGAGATATTCTTTCATTCCGTTTCTTATAATCTCACACCTGTTTACAAGAAAAAAAACGTAAATCTAAATCTAGTAAAGATCTATTGTTAGCTTATAAATGCTGAGGTGTAGCGCATAGAAAGAAAGGCACTTGATGCAAAACGAGTGGTGCTTAAGGAGGTCTGTTATTGTGTTCTTGCTAATGAAAATTAAAGTTAATAGCTGGTGTTGTTTTCAGGTTGTGTTTCATAGTTCAGGTTCACATATAAAAAAGGTTATAGGACGTTAGAAATAAATAAGATTTAGGAGTATGTAGTTTTTAGTTTGTTTTTAAAATATACATATCCAAATTACATTATACATTTTTTGGCTTCTTCATAGTTATGCTCCAGCGATTAATTGATAAAGAATTAGGTGAGCTAAGCGTAAGTGACTTCCCAACTTGGGTGTTTCCAACATGGTACATATTTTTCTTTTTAAGAAAAAGGCTGTTCTATTGAAATTCTTCACTTAATCCTGGGAACCACTTGCTCTATGCCAATACGGATACCTTTGCAACTCTTATAGTATATTTTTGAGTACCTTAAGATAAAGAATATAGATGTAGCATATAAGCAGTGATGTGAAAGAGGGTGGCATAGTAAATAACACAGTCATTAATGGAGCCCAGTTTTGAAGTTATAATGTGCTTGTTGATGCAAAGGATTGATACTGATAACAGTCAATTCCAGTGCAGCAAAAGATTATTTAGTCATGACAATTTAGCGCTAAATTGAGATGTGGAAAGTACTTGAGCTCTAGGAAGCCACTCATCTCAATTGCCCCACAAAATGATACTTCACCGTCACCTTGAGAAAAATGCATATCACCAGTACTGAGGTTTGCTCCTTCTACAAATACTGGAAGGTATATTTTTGAACCTCTGCTGAGATTTTTGATGTCACAGTTTCCTCCATTTTCACGTCCAGGTATTGTTCTTGCAGCCTCGTTGGCAATTCTAATCCACTCAGGAGTTCCATCTTGAATCTACATTATAATCATGAGTTGTCAAAAAAAAAATTTATGTGCTTGACAGTGAAGTTTGTTTGTTCATTCTCTTCTCTATTCAGTTTGTTTAACATATTACTATGACTCTTTATCATATTCTGTTTACTGTTTACAATAAAGTTAGGCTGCAGTTTTGTTGACAAGGAATTTGTCTTTTGTTTTTTTACAGAATTTGGTTTGGATTGACAGAACATGTAACTTTTAGGGAATGACAAAGTTGTCAGTTCCTGAAACAATTGCAAACCAATCATACCTTGCCAAGAATGCACCCTTTTGTTGAAGGTAGGTTAGCCAATGGTCTAGAATGCAAGACCTCACATAATTTGAGAGATCGGGGACCTGTTTCTTCGAGCTTTCTTTCCCTCTCATTCCATATATTGAGTAGTTCTTTTGAAGGCGCTGTTCCAATTATTCCAGGATGAATTAAACCAGGAAATCTTACACCTGTTTGTGAGATTTTTCAGTAGATCTTATTAGGATTAGATACGTATATTTGTCTAGGATATATTAGGAGAAGATATGCAGCCTTACCTGGTATATGAGGTGAGTAGGCATATATGCCTTCGAAATACCAAATAGCTTTAGTTGCACGGGGAAAATGGTCTGTTAGAAATCCTCCACCGTTCTCTCTGTCGAATATTGCTGTAAAACCCCATTCATCTCCAGGGAGAGGCCCTAAGTTGCATATTTCAACAGCAAGGAGATCACCTGGTTCAGCAGGATTTCCATCTGTGTCAACGACTCGTATTGGCCCACTGAGATAATGCACCTGCATAGGAGAGTTATATGATTCAGCCTGAAGTGATATCCAACATCATATGACTTAGGATCTAGTACTCTTTCTTGGTTAGATGCACCGGGTATGTTAGATTATGCACACTTACAGTGGATAGATCAACGGTTTTTACATCAATTGCAGAGTTATTATCTTGGATAGAGCCTGCTGTCCAATCAACCATCTCAATTCGGAACATCTCCCCTGTTTTAATCTCTGTTACAGGAGGTATCTCTGGGTGCCAACGGTTGTGGAGTGGCAACTTTTGTTGCCATGGCTTTTTCTTTAGGTCTATGGGGATTACTAGTCTTGGAGTTGGAGGAGCCATGGTGACTTAGTGTTCTGTGAATCTCTGAGCCTGTTTACTTCCATTACATGGCACTCTAAGGAAAGCAACTGACAAGGTTCCTAGCTGATTGGGACAAGGTTGCTAGTTGACAAATGGGGGTCACATCTCAGTAATTGTCACGGTTTGCCTTCTTGAAAATGACAATAAATATTGGACAGTGGACAGACTTGACGTTAGTATTTATCGCTTAGTGAGTATATTCAACTTGGAAAACTCAGCTCAATCCAGGCCAGTAAAATCAGAGCAAGAAATAACCCTTTCTAGCTTGAAAACAATGACATAAGAGTGTTGTGAAGAACTCACAACAGACAGATCCGCATGCTTGATGTCCTCGGCAGTATAGTCTATTGTTAGGCCGCCTCCACTAAAATCCAACATCTCAACCCTGAACACCTACCCAACTCGCACCTCTGCTACTGGAGGTATCTCCAGGTGCCACCGGTTGTGAGTAGGTGGATTTTGCTCAAATGGCTTCTTTTTTAAATCTACCTGCACTACTAACCTTGGACCCATTGAATTCATATTTTTTTTTCCTATGCAGAGCTTCGTGAAGCGGAGATGGAATTGGGGAGAGATCAAATAGCCCTAGCTAGATTCTCAAGCTTGGATTCACCCGAAAAGGTCGAAAAGCCCTTCTTTAAGCTTTCTTATTCGCTTTTTAGCGCATAACTTACTCTCTCACTTATATTCAAGATACATGGTATTTGTTCAAAGTTCATGATAAGTTAGAATATGGTTAGGATTTTTCCACCAATTGGACTATCTG</genome_strand>
        <mrna_strand>GTTTTTTAAGGTATTCCTATTTTCCTTGACCCTTGTAATGCAGATATCAATTCCAAAGGACCATACATAATATTACTTGATTACATAGCTATGAGTTTTGACGGTGCTTTTGACATTGAGAAGCAAAGTAGATCTCGGATATATCCACTTTTTTGTTGAACCGCAACTGCCCAAGATCTTTGTATGATTCGACTTTGGAGCCTTCAAAGACCTCTGTGGTATTTAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................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      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0053H21-RnoJv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U574584" ref_strand="+" ref_description="SGN-U574584 Tomato 200607#2 [4 ESTs aligned] (*GB) gi|217074056|gb|ACJ85388.1| (e_value=1e-30) unknown; (*ATH) AT4G37550.1 (e_value=5e-31)  Symbol: None | formamidase, putative / formamide amidohydrolase, putative, similar to SP:Q50228 Formamidase (EC 3.5.1.49) (Formamide amidohydrolase) {Methylophilus methylotrophus}; contains Pfam profile PF03069: Acetamidase/Formamidase family | chr4... ; ">
      <seq>ggaacaggtttatcttttactttcgtgctgtccatgcgaaggaaggatttcaggaattgttgatgcccccaatgctgttgccacccttgccatcccaacagctatttttgaccaggatattcgcccaaaggtcaataaagtgccccttgggccaaggcttataaggaatccaggaattccacaatgtacttatgatggaaacctgccaatcaccaaaaatcctttgctccatcaacaagggagcagctgcaacatggatgctagctcttgagcatggtatatgcatgtacagctactgctggaattgtatgaccaagttgaaagaagcaaagattagtctagttcatgaagtcatctatctgcaaattaggaaataattgttctagctgaagtatacggatcacactgttgggatgacaactgtataagctccgagcagatagcttctgcagaatgatgtagtctccatactgctcaagttgctgcatgatagaaaagaacattaattagttgtacaccttttctgtcatcattgattataacacaaacaagcactcaaggaaaaattgcctggtatgagctatgtttctcggactcttcaaaaatgtcatcgagtgcgtgtcagatccttcaaaagtggtgcaattttggaggagtccacatgggtgcagcaacatatttggagagtctgagcaacttanggtatgagcggcacatcatgaagacataaacattcttaacata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0053H21-RnoJv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0053H21.1" temp_strand="-" temp_description="C02SLe0053H21.1  AC226516.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0053H21 sequenced_by:kribb upload_account_name:korea">
        <position start="22449" stop="18176"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="22257" g_stop="22251" g_length="7"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="7" r_length="7" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="22250" i_stop="22145" i_length="106">
            <donor d_prob="0.934" d_score="0.00"/>
            <acceptor a_prob="0.968" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="22144" g_stop="22037" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="8" r_stop="115" r_length="108" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="22036" i_stop="20505" i_length="1532">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.944" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="20504" g_stop="20288" g_length="217"/>
          <reference_exon_boundary r_type="cDNA" r_start="116" r_stop="332" r_length="217" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="20287" i_stop="18888" i_length="1400">
            <donor d_prob="0.914" d_score="1.00"/>
            <acceptor a_prob="0.322" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="18887" g_stop="18476" g_length="412"/>
          <reference_exon_boundary r_type="cDNA" r_start="333" r_stop="744" r_length="412" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0053H21.1" gen_strand="-" ref_id="SGN-U574584" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>744</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0053H21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U574584" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="22257" e_stop="22251"/>
          <exon e_start="22144" e_stop="22037"/>
          <exon e_start="20504" e_stop="20288"/>
          <exon e_start="18887" e_stop="18476"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAACAGGTATTAAAACTCTCCCCGAAAATCTTCTTGTAACAGAATACTCTCGGGAACAGATAACATTAACATTCAGGAATTGCTGATATAAACATTATGCTGGTGCTATCAGGTTTATCTTTTACTTTCGTGCTGTCCATGCGAAGGAAGGATTTCAGGAATTGTTGATGCCCCCAATGCTGTTGCCACCCTTGCCATCCCAACAGCTATTTTTGACCAGGTACTAGTACTTCTCAGGGTTCAATTAAAGATAATATAAGAGTTGCAACCTACAGGTCCAATAAATGTGATTCCAATATCTGAAATTTCTATATCTTCTGGGGCACTGAGCTATTATTAAGCATGGAGTAATCAATGGAAATATCATACTAAGTCAAGGCATCTTATAGGAACATCCTCTCTGATAGCAACTGCAAACTAATAATTCTATGCAATGACTGAAATCCAAGCTATTTTAGTAGGTAGAACTACAATCTATAGCATAATATCAGTAATCAGCACATGAATATATATGTAACTTTAGAGAAGCCAGCTATGACAAGATACATCATCACTAGGAAATTTTTACCAGCTTATTGACAACAGATGGGCTAGACGAGCAAATGGAAGAAGGAATTGGTGAAATTGTTCAGTTATCTGAAGTAGATCAATCAGTAAAATATCTTTCACCAGATTAAGCTAGAGGCAATAAATATCCGCAAGAACAATTCTAAGAAGCTCATGGAAGTCAGTAGGAAGCACACATGGAAGAAACCATAGACGAATGAGCTAACCAAAGTCAATGTTCCTCTACAATCTTATGTCCAATGTTCTTTAAAAGAAATATTCTGCATGTACGAACTCTGGAGATAACCAAGTTTATCTCATGTCCAATGTTCTTTTAAAAGAAATATTTTCCATATACGAACACTGGAGATAACCAAGTTTGGGACGCATCTCTAGGTCTGTTATATTGCTTTTCTCAGAAATACCTTGAGTTTGGATGTGTCTAAGCGCCGGTTAAGTTGCATCTCTAAGAACAACTAGCAAGCAATGAATTTGTTTTTTCCGGTTCCTAATCTGAAACAAAAATAAATAACAATAATACTAATAAGGATTGTGTATCGAAGGAGTCGCATCTTTTACTAAATACCTTTGGAGTTCACACAAGCAAAATAAATATCTTTTCTGATACAGTTTATAAGCCTATAGCTGAATTAGTAAGTCATGGTACACATTTCCTTCTGATTTCTGAATCTTCTTGTGCTGGGGACAAATAACTACGAAGATGAGATTTTGTTCAATGCTCATCACATAATTCTAAATACTAATGACTTAAAAGGCTTACAAGTTGCTTCAGTCTCTACATAATCTTTTCCTTCTAAACTTTTCCTCCAAATTTCTTTCTAAGATGGCTTTTTTCCCCCAGTGCTATGCTTATTTAAATACCTTATTGGATTATCGGACAAATAAGCTGCACACACAAATAGTTTTCTCATTTCTTATTCATGGAAGATAAAGTAAGCAGTCTAGTCCGACACGATCTTATATCCTCTTAGAATCAAAATCAATGTTTATCACATGATCAGGACTGAAATTCCTTGCAAGTGTCGAATGAAACCACATTATGTGGGTAATTAAAAATAATAGATACAGGTAACTGAAATTGATCTAGAACTATTTAAACCTGGTTCTAAGAAATCGGCCTCTATTGCTGGTTTTCATGAGCAGGAAGTTCTGTTTTATTCCAACAGAATCACTTGTTTGATGCAGGATATTCGCCCAAAGGTCAATAAAGTGCCCCTTGGGCCAAGGCTTATAAGGAATCCAGGAATTCCACAATGTACTTATGATGGAAACCTGCCAATCACCAAAAATCCTTTGCTCCATCAACAAGGGAGCAGCTGCAACATGGATGCTAGCTCTTGAGCATGGTATATGCATGTACAGCTACTGCTGGAATTGTATGACCAAGTTGAAAGAAGCAAAGGTGAGATGCATGAAGCCTAACTAGACCTTCTTAACATCTAAAGATGTAGACATGTTCTTGAAAATGTAATAGCTCGGTATCACCAGTGAGACCATAAATAATTTTTAAATCGGAACATGGTAAACTTCATACTTGGACTAATCATCCTAATGTTGCTGCCTCTCGTGAATTTTCAGAGTTAAAACATTGACGTATTTTATAAATAGGAAAGAGTAACGTATTTTCCAGAGTCCATGAAGCAAATGAGGTTTAAAAAGGATTCTCACAGAAATGTCTCCAACATAAAAAAAAATAAATCATGACAACAGTCAAAGGCAACAAAAAACACAGGATAAATAAGACCAATTCAGCAAAAAGTGAGGCACATCTCCAGCCAACATTTACCATAAAAATAAAATAAAACAAAATATGTATGTAGGCCAACTTACAGAAATTCAATGAGATTGAAAGAGGTTAAATAACTGATATTCAACCTCTGCACTCCTTAAAGAAAGTAAATCCACCACTAGGAGGAGAAAATAATCCTGTATAGTTTCTGTAATATTTCGCCTAGACATGTAAATGTGAAAATCCCAAAACCAGAACCATCATTTGAATGCAAGACTGCAATGGAAATGGAGCTTAATTTTTATAGTCAATAATAGATAGATAGTGTCCGGTGGTGTTGAAGAGATGAGCATATGCCAAAAGCCCATAACCAAAGATCCAGTTCCACATTCAACACCTAGATAGCAAAACGAGATGTCGTCACATTTTAGTGAAAATGACATTCAAACAAAGAAAACTGGAAAAATTGGAAACTCACTTTGGAATACACACAGAACAGCAATAACCAAGTTAATAAATTTAGGAAGGAAGTTCTACCAAATAATATCTTGCAAGGAACACAGGTTACATTTCAGACTAACAGTAACCACACTAGCAGCCTTTATTTATTTATTGCTTGTATAATGAAATCAGGTATATAGATCTCAGCTCAGATATAAACTACCTTAAACATTGGACATGTAACTCACTTTTTCAAATTTTTTCTTGTATTTTACCTTAAGACATCAACATGATATAATCCAAAACCTTGGCTGGAGCAGTAACTACATGTTCTAACCTTAGCTGGAGTAGGCATGTTAGCTGCAATTTGTTTGCCTATTGCCTTTCGATGCCCTCACTTTTACTACTGTTTTTCTAATATTTTCCATTTGATGATTTCTTGTTCCAATAGGCAATAACTATATATTAGAAAGTAAAAAAAACCATATAAATGGAAAATTCCTTACTCGATTTGGTATTAAATCAAAGAGTACGCATCAAATATCCAACACCAACACTTTAGATGGCCAGGATTTAAATTAATGTCAGTTGTATAACTGTTAAAACTAAAAGGATGATTTTTTATATTGTAGATTAGTCTAGTTCATGAAGTCATCTATCTGCAAATTAGGAAATAATTGTTCTAGCTGAAGTATACGGATCACACTGTTGGGATGACAACTGTATAAGCTCCGAGCAGATAGCTTCTGCAGAATGATGTAGTCTCCATACTGCTCAAGTTGCTGCATGATAGAAAAGAACATTAATTAGTTGTACACCTTTTCTGTCATCATTGATTATAACACAAACAAGCACTCAAGGAAAAATTGCCTGGTATGAGCTATGTTTCTCGGACTCTTCAAAAATGTCATCGAGTGCGTGTCAGATCCTTCAAAAGTGGTGCAATTTTGGAGGAGTCCACATGGGTGCAGCAACATATTTGGAGAGTCTGAGCAACTTAGGGTATGAGCGGCACATCATGAAGACATAAACATTCTTAACATA</genome_strand>
        <mrna_strand>GGAACAG..........................................................................................................GTTTATCTTTTACTTTCGTGCTGTCCATGCGAAGGAAGGATTTCAGGAATTGTTGATGCCCCCAATGCTGTTGCCACCCTTGCCATCCCAACAGCTATTTTTGACCAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATATTCGCCCAAAGGTCAATAAAGTGCCCCTTGGGCCAAGGCTTATAAGGAATCCAGGAATTCCACAATGTACTTATGATGGAAACCTGCCAATCACCAAAAATCCTTTGCTCCATCAACAAGGGAGCAGCTGCAACATGGATGCTAGCTCTTGAGCATGGTATATGCATGTACAGCTACTGCTGGAATTGTATGACCAAGTTGAAAGAAGCAAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTAGTCTAGTTCATGAAGTCATCTATCTGCAAATTAGGAAATAATTGTTCTAGCTGAAGTATACGGATCACACTGTTGGGATGACAACTGTATAAGCTCCGAGCAGATAGCTTCTGCAGAATGATGTAGTCTCCATACTGCTCAAGTTGCTGCATGATAGAAAAGAACATTAATTAGTTGTACACCTTTTCTGTCATCATTGATTATAACACAAACAAGCACTCAAGGAAAAATTGCCTGGTATGAGCTATGTTTCTCGGACTCTTCAAAAATGTCATCGAGTGCGTGTCAGATCCTTCAAAAGTGGTGCAATTTTGGAGGAGTCCACATGGGTGCAGCAACATATTTGGAGAGTCTGAGCAACTTANGGTATGAGCGGCACATCATGAAGACATAAACATTCTTAACATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0053H21-RnoJv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U570534" ref_strand="+" ref_description="SGN-U570534 Tomato 200607#2 [6 ESTs aligned] ">
      <seq>ggaattggtgaaattgttcagttatctgaagtagatcaatcagtaaaatatctttcaccagattaagctagaggcaataaatatccgcaagaacaattctaagaagctcatggaagtcagtaggaagcacacatggaagaaaccatagacgaatgagctaaccaaagtcaatgttcctctacaatcttatgtccaatgttctttaaaagaaatattctgcatgtacgaactctggagataaccaagtttatctcatgtccaatgttcttttaaaagaaatattttccata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0053H21-RnoJv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0053H21.1" temp_strand="-" temp_description="C02SLe0053H21.1  AC226516.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0053H21 sequenced_by:kribb upload_account_name:korea">
        <position start="21945" stop="21056"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="21645" g_stop="21356" g_length="290"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="290" r_length="290" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0053H21.1" gen_strand="-" ref_id="SGN-U570534" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>290</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0053H21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U570534" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="21645" e_stop="21356"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAATTGGTGAAATTGTTCAGTTATCTGAAGTAGATCAATCAGTAAAATATCTTTCACCAGATTAAGCTAGAGGCAATAAATATCCGCAAGAACAATTCTAAGAAGCTCATGGAAGTCAGTAGGAAGCACACATGGAAGAAACCATAGACGAATGAGCTAACCAAAGTCAATGTTCCTCTACAATCTTATGTCCAATGTTCTTTAAAAGAAATATTCTGCATGTACGAACTCTGGAGATAACCAAGTTTATCTCATGTCCAATGTTCTTTTAAAAGAAATATTTTCCATA</genome_strand>
        <mrna_strand>GGAATTGGTGAAATTGTTCAGTTATCTGAAGTAGATCAATCAGTAAAATATCTTTCACCAGATTAAGCTAGAGGCAATAAATATCCGCAAGAACAATTCTAAGAAGCTCATGGAAGTCAGTAGGAAGCACACATGGAAGAAACCATAGACGAATGAGCTAACCAAAGTCAATGTTCCTCTACAATCTTATGTCCAATGTTCTTTAAAAGAAATATTCTGCATGTACGAACTCTGGAGATAACCAAGTTTATCTCATGTCCAATGTTCTTTTAAAAGAAATATTTTCCATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0053H21-RnoJv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U572965" ref_strand="+" ref_description="SGN-U572965 Tomato 200607#2 [9 ESTs aligned] (*GB) gi|147768857|emb|CAN78133.1| (e_value=2e-148) hypothetical; (*ATH) AT4G37560.1 (e_value=1e-142)  Symbol: None | formamidase, putative / formamide amidohydrolase, putative, similar to SP:Q50228 Formamidase (EC 3.5.1.49) (Formamide amidohydrolase) {Methylophilus methylotrophus}; contains Pfam profile PF03069: Acetamidase/Formamidase family | chr4... ; (*SWP) sp|Q9URY7|FMDA_SCHPO (e_value=7e-84) Putative formamidase C869.04 OS=Schizosaccharomyces pombe GN=SPAC869.04; ">
      <seq>gccatggctcctccaactccaagactagtaatccccatagacctaaagaaaaagccatggcaacaaaagttgccactccacaaccgttggcacccagagatacctcctgtaacagagattaaaacaggggagatgttccgaattgagatggttgattggacagcaggctctatccaagataataactctgcaattgatgtaaaaaccgttgatctatccactgtgcattatctcagtgggccaatacgagtcgttgacacagatggaaatcctgctgaaccaggtgatctccttgctgttgaaatatgcaacttagggcctctccctggagatgaatggggttttacagcaatattcgacagagagaacggtggaggatttctaacagaccattttccccgtgcaactaaagctatttggtatttcgaaggcatatatgcctactcacctcatataccaggtgtaagatttcctggtttaattcatcctggaataattggaacagcgccttcaaaagaactactcaatatatggaatgagagggaaagaaagctcgaagaaacaggtccccgatctctcaaattatgtgaggtcttgcattctagaccattggctaacctaccttcaacaaaagggtgcattcttggcaagattcaagatggaactcctgagtggattagaattgccaacgaggctgcaagaacaatacctggacgtgaaaatggaggaaactgtgacatcaaaaatctcagcagaggttcaaaaatataccttccagtatttgtagaaggagcaaacctcagtactggtgatatgcatttttctcaaggtgacggtgaagtatcattttgtggggcaattgagatgagtggcttcctagagctcaagtgtgagatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0053H21-RnoJv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0053H21.1" temp_strand="-" temp_description="C02SLe0053H21.1  AC226516.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0053H21 sequenced_by:kribb upload_account_name:korea">
        <position start="24888" stop="22925"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="24589" g_stop="24368" g_length="222"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="222" r_length="222" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="24367" i_stop="24253" i_length="115">
            <donor d_prob="0.852" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="24252" g_stop="24015" g_length="238"/>
          <reference_exon_boundary r_type="cDNA" r_start="223" r_stop="460" r_length="238" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="24014" i_stop="23928" i_length="87">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.970" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="23927" g_stop="23737" g_length="191"/>
          <reference_exon_boundary r_type="cDNA" r_start="461" r_stop="651" r_length="191" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="23736" i_stop="23463" i_length="274">
            <donor d_prob="0.962" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="23462" g_stop="23227" g_length="236"/>
          <reference_exon_boundary r_type="cDNA" r_start="652" r_stop="887" r_length="236" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0053H21.1" gen_strand="-" ref_id="SGN-U572965" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>887</cumulative_length_of_scored_exons>
        <coverage percentage="0.989" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0053H21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U572965" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="24589" e_stop="24368"/>
          <exon e_start="24252" e_stop="24015"/>
          <exon e_start="23927" e_stop="23737"/>
          <exon e_start="23462" e_stop="23227"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACCATGGCTCCTCCAACTCCAAGACTAGTAATCCCCATAGACCTAAAGAAAAAGCCATGGCAACAAAAGTTGCCACTCCACAACCGTTGGCACCCAGAGATACCTCCTGTAACAGAGATTAAAACAGGGGAGATGTTCCGAATTGAGATGGTTGATTGGACAGCAGGCTCTATCCAAGATAATAACTCTGCAATTGATGTAAAAACCGTTGATCTATCCACTGTAAGTGTGCATAATCTAACATACCCGGTGCATCTAACCAAGAAAGAGTACTAGATCCTAAGTCATATGATGTTGGATATCACTTCAGGCTGAATCATATAACTCTCCTATGCAGGTGCATTATCTCAGTGGGCCAATACGAGTCGTTGACACAGATGGAAATCCTGCTGAACCAGGTGATCTCCTTGCTGTTGAAATATGCAACTTAGGGCCTCTCCCTGGAGATGAATGGGGTTTTACAGCAATATTCGACAGAGAGAACGGTGGAGGATTTCTAACAGACCATTTTCCCCGTGCAACTAAAGCTATTTGGTATTTCGAAGGCATATATGCCTACTCACCTCATATACCAGGTAAGGCTGCATATCTTCTCCTAATATATCCTAGACAAATATACGTATCTAATCCTAATAAGATCTACTGAAAAATCTCACAAACAGGTGTAAGATTTCCTGGTTTAATTCATCCTGGAATAATTGGAACAGCGCCTTCAAAAGAACTACTCAATATATGGAATGAGAGGGAAAGAAAGCTCGAAGAAACAGGTCCCCGATCTCTCAAATTATGTGAGGTCTTGCATTCTAGACCATTGGCTAACCTACCTTCAACAAAAGGGTGCATTCTTGGCAAGGTATGATTGGTTTGCAATTGTTTCAGGAACTGACAACTTTGTCATTCCCTAAAAGTTACATGTTCTGTCAATCCAAACCAAATTCTGTAAAAAAACAAAAGACAAATTCCTTGTCAACAAAACTGCAGCCTAACTTTATTGTAAACAGTAAACAGAATATGATAAAGAGTCATAGTAATATGTTAAACAAACTGAATAGAGAAGAGAATGAACAAACAAACTTCACTGTCAAGCACATAAATTTTTTTTTTGACAACTCATGATTATAATGTAGATTCAAGATGGAACTCCTGAGTGGATTAGAATTGCCAACGAGGCTGCAAGAACAATACCTGGACGTGAAAATGGAGGAAACTGTGACATCAAAAATCTCAGCAGAGGTTCAAAAATATACCTTCCAGTATTTGTAGAAGGAGCAAACCTCAGTACTGGTGATATGCATTTTTCTCAAGGTGACGGTGAAGTATCATTTTGTGGGGCAATTGAGATGAGTGGCTTCCTAGAGCTCAA</genome_strand>
        <mrna_strand>GCCATGGCTCCTCCAACTCCAAGACTAGTAATCCCCATAGACCTAAAGAAAAAGCCATGGCAACAAAAGTTGCCACTCCACAACCGTTGGCACCCAGAGATACCTCCTGTAACAGAGATTAAAACAGGGGAGATGTTCCGAATTGAGATGGTTGATTGGACAGCAGGCTCTATCCAAGATAATAACTCTGCAATTGATGTAAAAACCGTTGATCTATCCACT...................................................................................................................GTGCATTATCTCAGTGGGCCAATACGAGTCGTTGACACAGATGGAAATCCTGCTGAACCAGGTGATCTCCTTGCTGTTGAAATATGCAACTTAGGGCCTCTCCCTGGAGATGAATGGGGTTTTACAGCAATATTCGACAGAGAGAACGGTGGAGGATTTCTAACAGACCATTTTCCCCGTGCAACTAAAGCTATTTGGTATTTCGAAGGCATATATGCCTACTCACCTCATATACCAG.......................................................................................GTGTAAGATTTCCTGGTTTAATTCATCCTGGAATAATTGGAACAGCGCCTTCAAAAGAACTACTCAATATATGGAATGAGAGGGAAAGAAAGCTCGAAGAAACAGGTCCCCGATCTCTCAAATTATGTGAGGTCTTGCATTCTAGACCATTGGCTAACCTACCTTCAACAAAAGGGTGCATTCTTGGCAAG..................................................................................................................................................................................................................................................................................ATTCAAGATGGAACTCCTGAGTGGATTAGAATTGCCAACGAGGCTGCAAGAACAATACCTGGACGTGAAAATGGAGGAAACTGTGACATCAAAAATCTCAGCAGAGGTTCAAAAATATACCTTCCAGTATTTGTAGAAGGAGCAAACCTCAGTACTGGTGATATGCATTTTTCTCAAGGTGACGGTGAAGTATCATTTTGTGGGGCAATTGAGATGAGTGGCTTCCTAGAGCTCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0053H21-RnoJv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U565427" ref_strand="+" ref_description="SGN-U565427 Tomato 200607#2 [5 ESTs aligned] ">
      <seq>aaaagttttatcgtgttatctagattaaattctagtgtgatgacttgatttaacctttgatttatctttagtgatttaacagagatacatcagttgcattcaccaagaaacagtgcaaaaagaagtgttatttttcacaagtatcatcattttgaggacagaaataatggtcctaaagctaatcctggacctaattgccttttgtagaggacccacaaatcaaaatctttaggatttgccaatatcttttgatggcttcacttcactgcaagtgcttggttttttgtctgcccacaaggatgatggtccctcaacggctgaacgtagtcttgtggtactcatctctgagaatacttttctacatatcacatatgtggttgcaatgtcttcaatcaagaaaggaaatgacttcactcatgttccgtagtttgattgggacatcttcacttgaaaaatgttactcaaggtactttctatcctggtggtagccagtgtgagaagtgttcccctcgtatcaattaggtgaacttcatacaaaatccttggtacttactatatttgaatgcagatgcacgaatcacactagtcatattgtgcactcaggccactagccagtgctgaagttgaactttagtgattcctgtttgtgtagattatatctatccatttgacattaactgtttgaagaagttgcaacagtgtccagcaactggggatcattccaaaaataggtgattccatgaactgggagattgctatttgatatgcttgatgtcaatctgcatcatcttttggccaaggagaaaaattatttaagtagaattaacctataacttctcacccaactgcttgaactaaaaatagtacgtgccatatatgtataatatgtactacctccgttcatgtttaattgtcatgatttctatttttagaatcaaactataagaactttgacaaaaattttaaaacgtatctttatcatattgatatggaaaaaattataactt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0053H21-RnoJv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0053H21.1" temp_strand="+" temp_description="C02SLe0053H21.1  AC226516.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0053H21 sequenced_by:kribb upload_account_name:korea">
        <position start="25201" stop="26807"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="25501" g_stop="26507" g_length="1007"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="1007" r_length="1007" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0053H21.1" gen_strand="+" ref_id="SGN-U565427" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>1007</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0053H21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U565427" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="25501" e_stop="26507"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAGTTTTATCGTGTTATCTAGATTAAATTCTAGTGTGATGACTTGATTTAACCTTTGATTTATCTTTAGTGATTTAACAGAGATACATCAGTTGCATTCACCAAGAAACAGTGCAAAAAGAAGTGTTATTTTTCACAAGTATCATCATTTTGAGGACAGAAATAATGGTCCTAAAGCTAATCCTGGACCTAATTGCCTTTTGTAGAGGACCCACAAATCAAAATCTTTAGGATTTGCCAATATCTTTTGATGGCTTCACTTCACTGCAAGTGCTTGGTTTTTTGTCTGCCCACAAGGATGATGGTCCCTCAACGGCTGAACGTAGTCTTGTGGTACTCATCTCTGAGAATACTTTTCTACATATCACATATGTGGTTGCAATGTCTTCAATCAAGAAAGGAAATGACTTCACTCATGTTCCGTAGTTTGATTGGGACATCTTCACTTGAAAAATGTTACTCAAGGTACTTTCTATCCTGGTGGTAGCCAGTGTGAGAAGTGTTCCCCTCGTATCAATTAGGTGAACTTCATACAAAATCCTTGGTACTTACTATATTTGAATGCAGATGCACGAATCACACTAGTCATATTGTGCACTCAGGCCACTAGCCAGTGCTGAAGTTGAACTTTAGTGATTCCTGTTTGTGTAGATTATATCTATCCATTTGACATTAACTGTTTGAAGAAGTTGCAACAGTGTCCAGCAACTGGGGATCATTCCAAAAATAGGTGATTCCATGAACTGGGAGATTGCTATTTGATATGCTTGATGTCAATCTGCATCATCTTTTGGCCAAGGAGAAAAATTATTTAAGTAGAATTAACCTATAACTTCTCACCCAACTGCTTGAACTAAAAATAGTACGTGCCATATATGTATAATATGTACTACCTCCGTTCATGTTTAATTGTCATGATTTCTATTTTTAGAGTCAAACTATAAGAACTTTGACAAAAATTTTAAAACGTATCTTTATCATATTGATATGGAAAAAATTATAACTT</genome_strand>
        <mrna_strand>AAAAGTTTTATCGTGTTATCTAGATTAAATTCTAGTGTGATGACTTGATTTAACCTTTGATTTATCTTTAGTGATTTAACAGAGATACATCAGTTGCATTCACCAAGAAACAGTGCAAAAAGAAGTGTTATTTTTCACAAGTATCATCATTTTGAGGACAGAAATAATGGTCCTAAAGCTAATCCTGGACCTAATTGCCTTTTGTAGAGGACCCACAAATCAAAATCTTTAGGATTTGCCAATATCTTTTGATGGCTTCACTTCACTGCAAGTGCTTGGTTTTTTGTCTGCCCACAAGGATGATGGTCCCTCAACGGCTGAACGTAGTCTTGTGGTACTCATCTCTGAGAATACTTTTCTACATATCACATATGTGGTTGCAATGTCTTCAATCAAGAAAGGAAATGACTTCACTCATGTTCCGTAGTTTGATTGGGACATCTTCACTTGAAAAATGTTACTCAAGGTACTTTCTATCCTGGTGGTAGCCAGTGTGAGAAGTGTTCCCCTCGTATCAATTAGGTGAACTTCATACAAAATCCTTGGTACTTACTATATTTGAATGCAGATGCACGAATCACACTAGTCATATTGTGCACTCAGGCCACTAGCCAGTGCTGAAGTTGAACTTTAGTGATTCCTGTTTGTGTAGATTATATCTATCCATTTGACATTAACTGTTTGAAGAAGTTGCAACAGTGTCCAGCAACTGGGGATCATTCCAAAAATAGGTGATTCCATGAACTGGGAGATTGCTATTTGATATGCTTGATGTCAATCTGCATCATCTTTTGGCCAAGGAGAAAAATTATTTAAGTAGAATTAACCTATAACTTCTCACCCAACTGCTTGAACTAAAAATAGTACGTGCCATATATGTATAATATGTACTACCTCCGTTCATGTTTAATTGTCATGATTTCTATTTTTAGAATCAAACTATAAGAACTTTGACAAAAATTTTAAAACGTATCTTTATCATATTGATATGGAAAAAATTATAACTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0053H21-RnoJv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U571488" ref_strand="+" ref_description="SGN-U571488 Tomato 200607#2 [7 ESTs aligned] (*GB) gi|157345259|emb|CAO71987.1| (e_value=9e-74) unnamed; (*ATH) AT5G67420.1 (e_value=4e-65) | Symbol: None | LOB domain protein 37 / lateral organ boundaries domain protein 37 (LBD37), identical to LOB DOMAIN 37 (Arabidopsis thaliana) GI:17227170 | chr5:26921515-26923252 REVERSE | Aliases: K8K14.16, K8K14_16; (*SWP) sp|Q9FN11|LBD37_ARATH (e_value=4e-64) LOB domain-containing protein 37 OS=Arabidopsis thaliana GN=LBD37; ">
      <seq>aaacttgaagccgactctttctctctcaagtctcaacctcattgtttatatataggcacatttcattctcttttcccttgcttattactatacaaatttttatttcttagctgcaaaagtatatcgctaattcttcatgctccggtaaccaattaatatatatacaaaaatatcagtataacaacaaaacggaaaaatgagttgtaatggttgtcgagtccttcgaaaaggatgcagtgataactgtatattgagaccttgtttgcaatggatcgaaacaccggaagcacaaggacacgctactgtatttgtagctaagttttttggccgtgctggacttatgtccttcatttccgccgttccagaaaaccaacggcctgctttgtttcagtccttgttatacgaagctgctgggagaacagtgaacccagtcaacggtgctgtaggtttattatggacaggtaattggcacgtctgtcaagcggcggtggaaaccgtcctccgcggcggcgcgttacggccgatctctgaatttctcggcgcgtcggtagagattgatgaggtgtctgattgcaccgatgtatttaagcttcaggatccaagtctaaacatgcgaccgaagatgcagaaacgacgtcgttctcctgaggaaacttcaatgttggatctcagtttaacaccaggttttaatcagaaagtgtataatagtcaccctttgccggagaatcatcggcgacctggaactccgtctatgaattcagaagaatctggaacaactacttgttttgagagtagtgctgtcattggagatcatcaaggaaaagaacccaaattactcagcttgttcaattagtttgtattaatattttccattttcttttttttttttactatgaggaaggttttttcctggaagtaaaattccggcgaatttttgtaaattattggcactggatttccctcgtgtaaaaaggaggggaaagtgaaagttttgccggggattccttccttgttttgttattttctcctttttgttttcataacgagtcttatgaatgttgaacattgaataaactgattgttaatcgattt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0053H21-RnoJv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0053H21.1" temp_strand="+" temp_description="C02SLe0053H21.1  AC226516.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0053H21 sequenced_by:kribb upload_account_name:korea">
        <position start="29260" stop="31027"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29560" g_stop="29937" g_length="378"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="380" r_length="380" r_score="0.979"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29938" i_stop="30015" i_length="78">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="30016" g_stop="30727" g_length="712"/>
          <reference_exon_boundary r_type="cDNA" r_start="381" r_stop="1092" r_length="712" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0053H21.1" gen_strand="+" ref_id="SGN-U571488" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>1090</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0053H21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U571488" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29560" e_stop="29937"/>
          <exon e_start="30016" e_stop="30727"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAACTTGAAGCCGACTCTTTCTCTCTCAAGTCTCAACCTCATTGTTTATATATAGGCACATTTCATTCTCTTTTCC-TTGCTTATTACTATCCAAATTTTTATTTCTT-GCTGCAAAAGTATATCGCTATTTGTTCATGTTCCGGTAACCAATTAATATATATACAAAAATATCAGTATAACAACAAAACGGAAAAATGAGTTGTAATGGTTGTCGAGTCCTTCGAAAAGGATGCAGTGATAACTGTATATTGAGACCTTGTTTGCAATGGATCGAAACACCGGAAGCACAAGGACACGCTACTGTATTTGTAGCTAAGTTTTTTGGCCGTGCTGGACTTATGTCCTTCATTTCCGCCGTTCCAGAAAACCAACGGCCTGGTATAGTCTCTTTGTTCATCAACTCTTTTTTTTTTTTGGTTTATCAACTCTGATTGATTTTGTGTATTTTGCTTGCAGCTTTGTTTCAGTCCTTGTTATACGAAGCTGCTGGGAGAACAGTGAACCCAGTCAACGGTGCTGTAGGTTTATTATGGACAGGTAATTGGCACGTCTGTCAAGCGGCGGTGGAAACCGTCCTCCGCGGCGGCGCGTTACGGCCGATCTCTGAATTTCTCGGCGCGTCGGTAGAGATTGATGAGGTGTCTGATTGCACCGATGTATTTAAGCTTCAGGATCCAAGTCTAAACATGCGACCGAAGATGCAGAAACGACGTCGTTCTCCTGAGGAAACTTCAATGTTGGATCTCAGTTTAACACCAGGTTTTAATCAGAAAGTGTATAATAGTCACCCTTTGCCGGAGAATCATCGGCGACCTGGAACTCCGTCTATGAATTCAGAAGAATCTGGAACAACTACTTGTTTTGAGAGTAGTGCTGTCATTGGAGATCATCAAGGAAAAGAACCCAAATTACTCAGCTTGTTCAATTAGTTTGTATTAATATTTTCCATTTTCTTTTTTTTTTTTACTATGAGGAAGGTTTTTTCCTGGAAGTAAAATTCCGGCGAATTTTTGTAAATTATTGGCACTGGATTTCCCTCGTGTAGAAAGGAGGGGAAAGTGAAAGTTTTGCCGGTGATTCCTTCCTTGTTTTGTTATTTTCTCCTTTTTGTTTTCATAACGAGTCTTATGAATGTTGAACATTGAATAAACTGATTGTTAATCGATTT</genome_strand>
        <mrna_strand>AAACTTGAAGCCGACTCTTTCTCTCTCAAGTCTCAACCTCATTGTTTATATATAGGCACATTTCATTCTCTTTTCCCTTGCTTATTACTATACAAATTTTTATTTCTTAGCTGCAAAAGTATATCGCTAATTCTTCATGCTCCGGTAACCAATTAATATATATACAAAAATATCAGTATAACAACAAAACGGAAAAATGAGTTGTAATGGTTGTCGAGTCCTTCGAAAAGGATGCAGTGATAACTGTATATTGAGACCTTGTTTGCAATGGATCGAAACACCGGAAGCACAAGGACACGCTACTGTATTTGTAGCTAAGTTTTTTGGCCGTGCTGGACTTATGTCCTTCATTTCCGCCGTTCCAGAAAACCAACGGCCTG..............................................................................CTTTGTTTCAGTCCTTGTTATACGAAGCTGCTGGGAGAACAGTGAACCCAGTCAACGGTGCTGTAGGTTTATTATGGACAGGTAATTGGCACGTCTGTCAAGCGGCGGTGGAAACCGTCCTCCGCGGCGGCGCGTTACGGCCGATCTCTGAATTTCTCGGCGCGTCGGTAGAGATTGATGAGGTGTCTGATTGCACCGATGTATTTAAGCTTCAGGATCCAAGTCTAAACATGCGACCGAAGATGCAGAAACGACGTCGTTCTCCTGAGGAAACTTCAATGTTGGATCTCAGTTTAACACCAGGTTTTAATCAGAAAGTGTATAATAGTCACCCTTTGCCGGAGAATCATCGGCGACCTGGAACTCCGTCTATGAATTCAGAAGAATCTGGAACAACTACTTGTTTTGAGAGTAGTGCTGTCATTGGAGATCATCAAGGAAAAGAACCCAAATTACTCAGCTTGTTCAATTAGTTTGTATTAATATTTTCCATTTTCTTTTTTTTTTTTACTATGAGGAAGGTTTTTTCCTGGAAGTAAAATTCCGGCGAATTTTTGTAAATTATTGGCACTGGATTTCCCTCGTGTAAAAAGGAGGGGAAAGTGAAAGTTTTGCCGGGGATTCCTTCCTTGTTTTGTTATTTTCTCCTTTTTGTTTTCATAACGAGTCTTATGAATGTTGAACATTGAATAAACTGATTGTTAATCGATTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0053H21-RnoJv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U574291" ref_strand="+" ref_description="SGN-U574291 Tomato 200607#2 [25 ESTs aligned] (*GB) gi|147772913|emb|CAN71562.1| (e_value=0) hypothetical; (*ATH) AT5G67385.1 (e_value=0)  Symbol: None | similar to phototropic-responsive protein, putative [Arabidopsis thaliana] (TAIR:At3g49970.1); similar to hypothetical protein-like protein [Sorghum bicolor] (GB:AAO16690.1); contains InterPro domain BTB/POZ domain (InterPro:IPR000210... ; (*SWP) sp|Q9FKB6|Y5880_ARATH (e_value=2e-123) BTB/POZ domain-containing protein At5g48800 OS=Arabidopsis thaliana GN=At5g48800; ">
      <seq>ggattcctccaatacaaaatacattttttcagagacctactgctactgttaacaataatatgaccactaaaaaggatgagcttctattctctgctatgaagaggacctctgactggattttctcccaagagattcccagtgatgtaactgtaaatgcaggaggaacctcctttacactgcacaagttcccattagtttcaaagagtggatacataagaaagttgatctcagaatctaatgaggctgatgtttctactatcgatatccctgatatacctggtggaggagaggcatttgaacttgcagcaaagttttgttatggaataaattttgagattagcacagaaaacattgccttgctgagatgcgtggcggaatatcttgagatgacagaagactatgcagttgcaaatttggtggaaagaactgaggcctactttaatgaagtagcaattacgagtcttgcgggtgcagttacaattttgcgttcatcagaaaaccttcttcccattgcagagaaagtaaaattggtgagccgatgcatagacacaattgcatatacagcctgcaaggataaccaattctccacatcaggtagagcagaagctggtatcaacggatccacgttttcaaacccgaagcctatagttgactggtggtctgaagatataaccgtccttagaattgattttttccaaagggttctgattgcgatgatggcaaggggattcaagcggtatgcacttggaccaatattaatgctctacgcacagaagtctcttcgaggtttggaaatatttggaaagggaaggaaaaagattgaaccaaagcaagaacatgaaaaaagagttgttttagaaaccatcgttagtcttctgccaaaggagaaaaatgcattgtccgttagctttctgtcaatgctgctccgagctgcaatatatctggagaccacgatagcttgcaggcttgacctggagaagacgatggcattgcagcggggacaggctggattggatgatctgctaattccttcaagttccttcacaggagacaccttgtatgatgttgaaaccgtgcagcgtattatgatgaatttccttgacaatgaggagggaaatccattaagagatgaagagtatcatgtgtctccttcattaagagacatggagcgggatggaaaacttatggaaaattaccttgctgaaatagcctctgaccgtaatctgtctgtcacaaacttcattaatcttgctgaagtcatcccagagcaagcaaggatcactgaagatgggatgtacagggccattgacatttatttgaaggcacatccagctctaagcgacatagaaagaaaaaaggtttgtggtattatggactgtcaaaaactatctcgagaagcttgtgctcatgctgctcaaaatgataggctccctggtcagacagttgagcaagtactttactaccagcagcaacggcttcacaatgggagccagcttgtagcaactgaacctcctgctcttggttcttccaaaagggatgatcagttctctactaaccctgtttcagacgaggtctcgagtctaaaacgagaaaatcaggagctgaaatttgagctgctgaaaatgaagacgaggttgatagaaattgaaaaaccaaagtcaaatacatcagcctcaagcagccctttggtcattactcagccatctgctggtaaacctcctttgccaagaaaatctaacttcatgagctcagtatcgaaaaagctcggaagatttattcgagcggatggactcacgcatggcaaagcccgaaataaaccaagtaaagatagacgtcattccatatcgtgatttcagctagctatatttccattattgtcaaaatatggtacatattggaatttttcaatttaatcatgcaagtttgtatggtaaagtatatattttttcgtgctttatccagaaatattatttatgaaagattgtaatatttgatttctcttatataccatgaaaaaatatttgcaattaaaaaaagggaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0053H21-RnoJv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0053H21.1" temp_strand="-" temp_description="C02SLe0053H21.1  AC226516.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0053H21 sequenced_by:kribb upload_account_name:korea">
        <position start="41244" stop="37133"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="40944" g_stop="40830" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="115" r_length="115" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="40829" i_stop="40740" i_length="90">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="40739" g_stop="40670" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="116" r_stop="185" r_length="70" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="40669" i_stop="40365" i_length="305">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.840" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="40364" g_stop="39759" g_length="606"/>
          <reference_exon_boundary r_type="cDNA" r_start="186" r_stop="791" r_length="606" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="39758" i_stop="39677" i_length="82">
            <donor d_prob="0.976" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="39676" g_stop="39146" g_length="531"/>
          <reference_exon_boundary r_type="cDNA" r_start="792" r_stop="1322" r_length="531" r_score="0.983"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="39145" i_stop="38140" i_length="1006">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="38139" g_stop="37436" g_length="704"/>
          <reference_exon_boundary r_type="cDNA" r_start="1323" r_stop="2026" r_length="704" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0053H21.1" gen_strand="-" ref_id="SGN-U574291" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>2026</cumulative_length_of_scored_exons>
        <coverage percentage="0.992" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0053H21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U574291" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="40944" e_stop="40830"/>
          <exon e_start="40739" e_stop="40670"/>
          <exon e_start="40364" e_stop="39759"/>
          <exon e_start="39676" e_stop="39146"/>
          <exon e_start="38139" e_stop="37436"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGATTCCTCCAATACAAAATACATTTTTTCAGAGACCTACTGCTACTGTTAACAATAATATGACCACTAAAAAGGATGAGCTTCTATTCTCTGCTATGAAGAGGACCTCTGACTGGTATGTTCTTTTCTCATTTTTTTAAATCTTCTGCTTTCTAGAAGTAATCTATCTCTTTATTATATTCTTCTATTATAATAATCTTAACAGGATTTTCTCCCAAGAGATTCCCAGTGATGTAACTGTAAATGCAGGAGGAACCTCCTTTACACTGCACAAGGTGAGTTGTTCTATCTGTGCCTTTGTCATAACTAATCCCTGCACACAATCAAAAAAATTGTTGTTGGTTTAATTACTAAAATTCCTAATTGGATTGAAATTATCGACCTTAGTCACATCTCAGTGTAATTATAACAACAAATTCAGTGTAATCGGGGTCGGGGGAGGGGTTATGTAGACTTACCCTAACTTTTAGGGATAGAGAGGTCCTCGCCAATATGAACGAGCTCACACAGGTCGAGTTAAGGCCTTAGTCATGATGATTGATAAGTAGGATCAATAATGTATCAGTTGTGATCCTTGCAGTTCCCATTAGTTTCAAAGAGTGGATACATAAGAAAGTTGATCTCAGAATCTAATGAGGCTGATGTTTCTACTATCGATATCCCTGATATACCTGGTGGAGGAGAGGCATTTGAACTTGCAGCAAAGTTTTGTTATGGAATAAATTTTGAGATTAGCACAGAAAACATTGCCTTGCTGAGATGCGTGGCGGAATATCTTGAGATGACAGAAGACTATGCAGTTGCAAATTTGGTGGAAAGAACTGAGGCCTACTTTAATGAAGTAGCAATTACGAGTCTTGCGGGTGCAGTTACAATTTTGCGTTCATCAGAAAACCTTCTTCCCATTGCAGAGAAAGTAAAATTGGTGAGCCGATGCATAGACACAATTGCATATACAGCCTGCAAGGATAACCAATTCTCCACATCAGGTAGAGCAGAAGCTGGTATCAACGGATCCACGTTTTCAAACCCGAAGCCTATAGTTGACTGGTGGTCTGAAGATATAACCGTCCTTAGAATTGATTTTTTCCAAAGGGTTCTGATTGCGATGATGGCAAGGGGATTCAAGCGGTATGCACTTGGACCAATATTAATGCTCTACGCACAGAAGTCTCTTCGAGGTTTGGTGAGGCCTTGTACTATAAAATCTTGATAAATTGGTTAAAATGAAATAATTATGCTTATAGTAGTTTTTTTGTTTATTACAGGAAATATTTGGAAAGGGAAGGAAAAAGATTGAACCAAAGCAAGAACATGAAAAAAGAGTTGTTTTAGAAACCATCGTTAGTCTTCTGCCAAAGGAGAAAAATGCATTGTCCGTTAGCTTTCTGTCAATGCTGCTCCGAGCTGCAATATATCTGGAGACCACGATAGCTTGCAGGCTTGACCTGGAGAAGAGGATGGCATTGCAGCTTGGACAGGCTGTATTGGATGATCTGTTAATTCCTTCAAGTTCCTTCACAGGAGACACCTTGTATGATGTTGAAACCGTGCAGCGTATTATGATGAATTTCCTTGACAATGAGGAGGGAAATCGATTAGGAGATGAAGAGTATCATGTGTCTCCTTCATTAAGTGACATGGAGCGGGTTGGAAAACTTATGGAAAATTACCTTGCTGAAATAGCCTCTGACCGTAATCTGTCTGTCACAAACTTCATTAATCTTGCTGAAGTCATCCCAGAGCAAGCAAGGATCACTGAAGATGGGATGTACAGGGCCATTGACATTTATTTGAAGGTATGTGCGAATAACATAACCTGATTAGTTTTAAGTTCATTTTTTTATATTTACGCATACAAGCAGCATTTCATCAATTTAGGATTACAGGCCATGTTTAGTAATGGGAAAAAACTATTGGTCCTGACTGCTACATTGTAATTGCCACGCTTAAATTTTATAATTTCCTTACAATTTACCTCCTGGTGCTAGCATGATAGTCTCCCTTTATTAGAGGTATGCATCTGGACCTCTGAAGCTTCTGATGTTCTATTAGACTATGTAAAGGGATATTTATATCATTCCGTGTTCTCTGATCACGGGAGTTATGTGCCTAATTCAGACTGAAATGCTTTTTGGGAATAAACATAATTTGGCATGCTTATACATAATGAGTTTAAGTTCGATGCATCCTAACCTTTACACTCAATACCATGTATATAAGCATGGTATATAAGAATTTGACATGCCTATATTCTTGAGTATTCTCAAAAAAAAAAAAATAGTCTCGGTTCTACGCACTGACAGATGTTATGAAACTTAAATCCATACATGTATTTCATATTGGGTTTCTCCTCCTAAAGAAGAAGCTCGTATATGTGTTCATAGATGTGCAACTTGCACCCCCCTGCTGTTACTTTTTCTAAAGATGAGGGTAGAATCAATAGTTTGTCAGAGTAGAAGCTCCAAATCCTATATTTGCTGAGTTACATAATAACAAGATAGAAACCATGTACCCCATTTGTTGATCTTCACCTATCATGTCGTCAGTTCTATATTCTTGAGTAATGAGTTGAACTTGATCAGAAAGTCTAAGCTTTTCAATCGCTGATTAAAAAGCGTGGAAACCTTGATTTAAAGCTAACATGATCTTATTGTTGAATTGTGTTATTATCTTAATTCTTTAGTAAAAGCTTGGACTACTAGAGATTACATGAGCACAGTTTTATTTGCTTAATTATGTCTTCAACGCATCAATTAAACTATGGAAGTGTGTTTAATATGTTATTGTTGTTGCAATTTGAAGGCACATCCAGCTCTAAGCGACATAGAAAGAAAAAAGGTTTGTGGTATTATGGACTGTCAAAAACTATCTCGAGAAGCTTGTGCTCATGCTGCTCAAAATGATAGGCTCCCTGTTCAGACAGTTGTGCAAGTACTTTACTACGAGCAGCAACGTCTTCACAATGGGAGCCAGCTTGTAGCAACTGAACCTCCTGCTCTTGTTTCTTCCAAAAGGGATGATCAGTTCTCTACTAACCCTGTTTCAGACGAGGTCTCGAGTCTAAAACGAGAAAATCAGGAGCTGAAATTTGAGCTGCTGAAAATGAAGACGAGGTTGATAGAAATTGAAAAACCAAAGTCAAATACATCAGCCTCAAGCAGCCCTTTGGTCATTACTCAGCCATCTGCTGGTAAACCTCCTTTGCCAAGAAAATCTAACTTCATGAGCTCAGTATCGAAAAAGCTCGGAAGATTTATTCGAGCGGATGGACTCACGCATGGCAAAGCCCGAAATAAACCAAGTAAAGATAGACGTCATTCCATATCGTGATTTCAGCTAGCTATATTTCCATTATTGTCAAAATATGGTACATATTGGAATTTTTCAATTTAATCATGCAAGTTTGTATGGTAAAGTATATATTTTTTCGTGCTTTATCCAGAAATATTATTTATGAAAGATTGTAATATTTGATTTCTCTTATATACCATGAAAAAATATTTGCA</genome_strand>
        <mrna_strand>GGATTCCTCCAATACAAAATACATTTTTTCAGAGACCTACTGCTACTGTTAACAATAATATGACCACTAAAAAGGATGAGCTTCTATTCTCTGCTATGAAGAGGACCTCTGACTG..........................................................................................GATTTTCTCCCAAGAGATTCCCAGTGATGTAACTGTAAATGCAGGAGGAACCTCCTTTACACTGCACAAG.................................................................................................................................................................................................................................................................................................................TTCCCATTAGTTTCAAAGAGTGGATACATAAGAAAGTTGATCTCAGAATCTAATGAGGCTGATGTTTCTACTATCGATATCCCTGATATACCTGGTGGAGGAGAGGCATTTGAACTTGCAGCAAAGTTTTGTTATGGAATAAATTTTGAGATTAGCACAGAAAACATTGCCTTGCTGAGATGCGTGGCGGAATATCTTGAGATGACAGAAGACTATGCAGTTGCAAATTTGGTGGAAAGAACTGAGGCCTACTTTAATGAAGTAGCAATTACGAGTCTTGCGGGTGCAGTTACAATTTTGCGTTCATCAGAAAACCTTCTTCCCATTGCAGAGAAAGTAAAATTGGTGAGCCGATGCATAGACACAATTGCATATACAGCCTGCAAGGATAACCAATTCTCCACATCAGGTAGAGCAGAAGCTGGTATCAACGGATCCACGTTTTCAAACCCGAAGCCTATAGTTGACTGGTGGTCTGAAGATATAACCGTCCTTAGAATTGATTTTTTCCAAAGGGTTCTGATTGCGATGATGGCAAGGGGATTCAAGCGGTATGCACTTGGACCAATATTAATGCTCTACGCACAGAAGTCTCTTCGAGGTTTG..................................................................................GAAATATTTGGAAAGGGAAGGAAAAAGATTGAACCAAAGCAAGAACATGAAAAAAGAGTTGTTTTAGAAACCATCGTTAGTCTTCTGCCAAAGGAGAAAAATGCATTGTCCGTTAGCTTTCTGTCAATGCTGCTCCGAGCTGCAATATATCTGGAGACCACGATAGCTTGCAGGCTTGACCTGGAGAAGACGATGGCATTGCAGCGGGGACAGGCTGGATTGGATGATCTGCTAATTCCTTCAAGTTCCTTCACAGGAGACACCTTGTATGATGTTGAAACCGTGCAGCGTATTATGATGAATTTCCTTGACAATGAGGAGGGAAATCCATTAAGAGATGAAGAGTATCATGTGTCTCCTTCATTAAGAGACATGGAGCGGGATGGAAAACTTATGGAAAATTACCTTGCTGAAATAGCCTCTGACCGTAATCTGTCTGTCACAAACTTCATTAATCTTGCTGAAGTCATCCCAGAGCAAGCAAGGATCACTGAAGATGGGATGTACAGGGCCATTGACATTTATTTGAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACATCCAGCTCTAAGCGACATAGAAAGAAAAAAGGTTTGTGGTATTATGGACTGTCAAAAACTATCTCGAGAAGCTTGTGCTCATGCTGCTCAAAATGATAGGCTCCCTGGTCAGACAGTTGAGCAAGTACTTTACTACCAGCAGCAACGGCTTCACAATGGGAGCCAGCTTGTAGCAACTGAACCTCCTGCTCTTGGTTCTTCCAAAAGGGATGATCAGTTCTCTACTAACCCTGTTTCAGACGAGGTCTCGAGTCTAAAACGAGAAAATCAGGAGCTGAAATTTGAGCTGCTGAAAATGAAGACGAGGTTGATAGAAATTGAAAAACCAAAGTCAAATACATCAGCCTCAAGCAGCCCTTTGGTCATTACTCAGCCATCTGCTGGTAAACCTCCTTTGCCAAGAAAATCTAACTTCATGAGCTCAGTATCGAAAAAGCTCGGAAGATTTATTCGAGCGGATGGACTCACGCATGGCAAAGCCCGAAATAAACCAAGTAAAGATAGACGTCATTCCATATCGTGATTTCAGCTAGCTATATTTCCATTATTGTCAAAATATGGTACATATTGGAATTTTTCAATTTAATCATGCAAGTTTGTATGGTAAAGTATATATTTTTTCGTGCTTTATCCAGAAATATTATTTATGAAAGATTGTAATATTTGATTTCTCTTATATACCATGAAAAAATATTTGCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0053H21-RnoJv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U587305" ref_strand="+" ref_description="SGN-U587305 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>tttttcagagacctactgctactgttaacaataatatgaccactaaaaaggatgagcttctattctctgctatgaagaggacctctgactggtatgttcttttctcatttttttaaatcttctgctttctagaagtaatctatctctttattatattcttctattataataatcttaacaggattttctcccaagagattcccagtgatgtaactgtaaatgcaggaggaacctcctttacactgcacaaggtgagttgttctatctgtgcctttgtcataactaatccctgcacacaatcaaaaaaattgttgttggtttaattactaaaattcctaattggattgaaattatcgaccttagtcacatctcagtgtaattataacaacaaattcagtgtaatcggggtcgggggaggggttatgtagacttaccctaacttttagggatagagaggtcctcgccaatatgaacgagctcacacaggtcgagttaaggccttagtcatgatgattgataagtaggatcaataatgtatcagttgtgatccttgcagttcccattagtttcaaagagtggatacataagaaagttgatctcagaatctaatgaggctgatgtttctactatcgatatccctgatatacctggtggaggagaggcatttgaacttgca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0053H21-RnoJv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0053H21.1" temp_strand="-" temp_description="C02SLe0053H21.1  AC226516.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0053H21 sequenced_by:kribb upload_account_name:korea">
        <position start="41220" stop="39945"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="40920" g_stop="40245" g_length="676"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="676" r_length="676" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0053H21.1" gen_strand="-" ref_id="SGN-U587305" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>676</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0053H21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U587305" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="40920" e_stop="40245"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTTCAGAGACCTACTGCTACTGTTAACAATAATATGACCACTAAAAAGGATGAGCTTCTATTCTCTGCTATGAAGAGGACCTCTGACTGGTATGTTCTTTTCTCATTTTTTTAAATCTTCTGCTTTCTAGAAGTAATCTATCTCTTTATTATATTCTTCTATTATAATAATCTTAACAGGATTTTCTCCCAAGAGATTCCCAGTGATGTAACTGTAAATGCAGGAGGAACCTCCTTTACACTGCACAAGGTGAGTTGTTCTATCTGTGCCTTTGTCATAACTAATCCCTGCACACAATCAAAAAAATTGTTGTTGGTTTAATTACTAAAATTCCTAATTGGATTGAAATTATCGACCTTAGTCACATCTCAGTGTAATTATAACAACAAATTCAGTGTAATCGGGGTCGGGGGAGGGGTTATGTAGACTTACCCTAACTTTTAGGGATAGAGAGGTCCTCGCCAATATGAACGAGCTCACACAGGTCGAGTTAAGGCCTTAGTCATGATGATTGATAAGTAGGATCAATAATGTATCAGTTGTGATCCTTGCAGTTCCCATTAGTTTCAAAGAGTGGATACATAAGAAAGTTGATCTCAGAATCTAATGAGGCTGATGTTTCTACTATCGATATCCCTGATATACCTGGTGGAGGAGAGGCATTTGAACTTGCA</genome_strand>
        <mrna_strand>TTTTTCAGAGACCTACTGCTACTGTTAACAATAATATGACCACTAAAAAGGATGAGCTTCTATTCTCTGCTATGAAGAGGACCTCTGACTGGTATGTTCTTTTCTCATTTTTTTAAATCTTCTGCTTTCTAGAAGTAATCTATCTCTTTATTATATTCTTCTATTATAATAATCTTAACAGGATTTTCTCCCAAGAGATTCCCAGTGATGTAACTGTAAATGCAGGAGGAACCTCCTTTACACTGCACAAGGTGAGTTGTTCTATCTGTGCCTTTGTCATAACTAATCCCTGCACACAATCAAAAAAATTGTTGTTGGTTTAATTACTAAAATTCCTAATTGGATTGAAATTATCGACCTTAGTCACATCTCAGTGTAATTATAACAACAAATTCAGTGTAATCGGGGTCGGGGGAGGGGTTATGTAGACTTACCCTAACTTTTAGGGATAGAGAGGTCCTCGCCAATATGAACGAGCTCACACAGGTCGAGTTAAGGCCTTAGTCATGATGATTGATAAGTAGGATCAATAATGTATCAGTTGTGATCCTTGCAGTTCCCATTAGTTTCAAAGAGTGGATACATAAGAAAGTTGATCTCAGAATCTAATGAGGCTGATGTTTCTACTATCGATATCCCTGATATACCTGGTGGAGGAGAGGCATTTGAACTTGCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0053H21-RnoJv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U600722" ref_strand="+" ref_description="SGN-U600722 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|147765629|emb|CAN62656.1| (e_value=2e-79) hypothetical; (*ATH) AT3G49950.1 (e_value=4e-52) | Symbol: None | scarecrow transcription factor family protein, lateral suppressor protein - Lycopersicon esculentum,  EMBL:AF098674 | chr3:18533555-18534787 FORWARD | Aliases: F3A4.30; (*SWP) sp|Q9SZF7|SHR_ARATH (e_value=1e-20) Protein SHORT-ROOT OS=Arabidopsis thaliana GN=SHR; ">
      <seq>agtctttttctcttctcttctcctctctacttatttctctaaaaacaaaaacaaaaaaaaaaaagtttcattcacaagttcaattggaaaaacttttctctaattccttcctctcatgatgcaatttactgagagtttacctccacaagtttcatcattttcaagtttgatgatgaacaaggatagtagtactaataataatcagatccaacgcgcccgcccgtggcctggttttcacacatcgaagaatttggggaacattggggatactaattgcatggaacagttgttagtccattgcgccaatgccatcgagagcaatgacgcaactttagcacaacaaatattatgggtccttaataacattgcccctcctgatggtgactcgaaccaacgcctaacttgtggattcctacgagccctaattcttcgtgctgcgaaaattgggacttgtaaattactcactgctaatctgaatcattccatggaaactcataaattctccattattgagcttgcaagtttcgttgatttaaccccttggcatcggttcgggttcacggctgctaacgcttctatattagaagctgtggaaggttactctattattcacattgttgatttcagcttaactcattgcatgcaaattccaacacttatagatgcagtttctactcgagtagaagga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0053H21-RnoJv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0053H21.1" temp_strand="+" temp_description="C02SLe0053H21.1  AC226516.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0053H21 sequenced_by:kribb upload_account_name:korea">
        <position start="47081" stop="48369"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="47381" g_stop="48069" g_length="689"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="688" r_length="688" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0053H21.1" gen_strand="+" ref_id="SGN-U600722" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>689</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0053H21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U600722" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="47381" e_stop="48069"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTCTTTTTCTCTTCTCTTCTCCTCTCTACTTATTTCTCTAAAAACAAAAACAAAAAAAAAAAAGTTTCATTCACAAGTTCAATTGGAAAAACTTTTCTCTAATTCCTTCCTCTCATGATGCAATTTACTGAGAGTTTACCTCCACAAGTTTCATCATTTTCAAGTTTGATGATGAACAAGGATAGTAGTACTAATAATAATCAGATCCAACGCGCCCGCCCGTGGCCTGGTTTTCACACATCGAAGAATTTGGGGAACATTGGGGATACTAATTGCATGGAACAGTTGTTAGTCCATTGCGCCAATGCCATCGAGAGCAATGACGCAACTTTAGCACAACAAATATTATGGGTCCTTAATAACATTGCCCCTCCTGATGGTGACTCGAACCAACGCCTAACTTGTGGATTCCTACGAGCCCTAATTCTTCGTGCTGCGAAAATTGGGACTTGTAAATTACTCACTGCTAATCTGAATCATTCCATGGAAACTCATAAATTCTCCATTATTGAGCTTGCAAGTTTCGTTGATTTAACCCCCTTGGCATCGGTTCGGGTTCACGGCTGCTAACGCTTCTATATTAGAAGCTGTGGAAGGTTACTCTATTATTCACATTGTTGATTTCAGCTTAACTCATTGCATGCAAATTCCAACACTTATAGATGCAGTTTCTACTCGAGTAGAAGGA</genome_strand>
        <mrna_strand>AGTCTTTTTCTCTTCTCTTCTCCTCTCTACTTATTTCTCTAAAAACAAAAACAAAAAAAAAAAAGTTTCATTCACAAGTTCAATTGGAAAAACTTTTCTCTAATTCCTTCCTCTCATGATGCAATTTACTGAGAGTTTACCTCCACAAGTTTCATCATTTTCAAGTTTGATGATGAACAAGGATAGTAGTACTAATAATAATCAGATCCAACGCGCCCGCCCGTGGCCTGGTTTTCACACATCGAAGAATTTGGGGAACATTGGGGATACTAATTGCATGGAACAGTTGTTAGTCCATTGCGCCAATGCCATCGAGAGCAATGACGCAACTTTAGCACAACAAATATTATGGGTCCTTAATAACATTGCCCCTCCTGATGGTGACTCGAACCAACGCCTAACTTGTGGATTCCTACGAGCCCTAATTCTTCGTGCTGCGAAAATTGGGACTTGTAAATTACTCACTGCTAATCTGAATCATTCCATGGAAACTCATAAATTCTCCATTATTGAGCTTGCAAGTTTCGTTGATTTAA-CCCCTTGGCATCGGTTCGGGTTCACGGCTGCTAACGCTTCTATATTAGAAGCTGTGGAAGGTTACTCTATTATTCACATTGTTGATTTCAGCTTAACTCATTGCATGCAAATTCCAACACTTATAGATGCAGTTTCTACTCGAGTAGAAGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0053H21-RnoJv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U597652" ref_strand="+" ref_description="SGN-U597652 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|147765629|emb|CAN62656.1| (e_value=4e-81) hypothetical; (*ATH) AT3G49950.1 (e_value=1e-56) | Symbol: None | scarecrow transcription factor family protein, lateral suppressor protein - Lycopersicon esculentum,  EMBL:AF098674 | chr3:18533555-18534787 FORWARD | Aliases: F3A4.30; (*SWP) sp|Q8GVE1|CIGR2_ORYSJ (e_value=6e-14) Chitin-inducible gibberellin-responsive protein 2 OS=Oryza sativa subsp. japonica GN=CIGR2; ">
      <seq>cgaacagctacgtgttcaaaatctaatacgtccggataatggcgaagcactagtaataaactgtcacatgatgcttcattacataccggaggaaacaacggtaatttccaactcattccgtgccatgtttcttaaggccattcggaatttggacccaacaattgttgtgctagtagatgaagacgcggattttacttctaataatctggtgtgcagattaagatcggcgtttaattatttatggataccttatgatacagtggatacatttcttccgcgagggagcaagcaaaggcagtggtatgaagcggatatttgctggaagattgagaacgtgatagctcaggagggaatacaacgactagaacggctggagccgaagagtcagtgggtgcaacggatgagaaatgcaaatttcagaagcagtggatttagcgaagagggagttacggaagtgaagaacatgttggatgaacatgcagctgggtggggggctaaagaaggatgaagaatatcttgtgcttacatgggaaggacataatgttgtatttgctactgcttgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0053H21-RnoJv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0053H21.1" temp_strand="+" temp_description="C02SLe0053H21.1  AC226516.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0053H21 sequenced_by:kribb upload_account_name:korea">
        <position start="47943" stop="49104"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="48243" g_stop="48804" g_length="562"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="563" r_length="563" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0053H21.1" gen_strand="+" ref_id="SGN-U597652" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>562</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0053H21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U597652" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="48243" e_stop="48804"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGAACAGCTACGTGTTCAAAATCTAATACGTCCGGATAATGGCGAAGCACTAGTAATAAACTGTCACATGATGCTTCATTACATACCGGAGGAAACAACGGTAATTTCCAACTCATTCCGTGCCATGTTTCTTAAGGCCATTCGGAATTTGGACCCAACAATTGTTGTGCTAGTAGATGAAGACGCGGATTTTACTTCTAATAATCTGGTGTGCAGATTAAGATCGGCGTTTAATTATTTATGGATACCTTATGATACAGTGGATACATTTCTTCCGCGAGGGAGCAAGCAAAGGCAGTGGTATGAAGCGGATATTTGCTGGAAGATTGAGAACGTGATAGCTCAGGAGGGAATACAACGACTAGAACGGCTGGAGCCGAAGAGTCAGTGGGTGCAACGGATGAGAAATGCAAATTTCAGAAGCAGTGGATTTAGCGAAGAGGGAGTTACGGAAGTGAAGAACATGTTGGATGAACATGCAGCTGGGT-GGGGGCTAAAGAGGGATGAAGAATATCTTGTGCTTACATGGAAAGGACATAATGTTGTATTTGCTACTGCTTGG</genome_strand>
        <mrna_strand>CGAACAGCTACGTGTTCAAAATCTAATACGTCCGGATAATGGCGAAGCACTAGTAATAAACTGTCACATGATGCTTCATTACATACCGGAGGAAACAACGGTAATTTCCAACTCATTCCGTGCCATGTTTCTTAAGGCCATTCGGAATTTGGACCCAACAATTGTTGTGCTAGTAGATGAAGACGCGGATTTTACTTCTAATAATCTGGTGTGCAGATTAAGATCGGCGTTTAATTATTTATGGATACCTTATGATACAGTGGATACATTTCTTCCGCGAGGGAGCAAGCAAAGGCAGTGGTATGAAGCGGATATTTGCTGGAAGATTGAGAACGTGATAGCTCAGGAGGGAATACAACGACTAGAACGGCTGGAGCCGAAGAGTCAGTGGGTGCAACGGATGAGAAATGCAAATTTCAGAAGCAGTGGATTTAGCGAAGAGGGAGTTACGGAAGTGAAGAACATGTTGGATGAACATGCAGCTGGGTGGGGGGCTAAAGAAGGATGAAGAATATCTTGTGCTTACATGGGAAGGACATAATGTTGTATTTGCTACTGCTTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0053H21-RnoJv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U580841" ref_strand="+" ref_description="SGN-U580841 Tomato 200607#2 [102 ESTs aligned] (*GB) gi|14485511|emb|CAC42086.1| (e_value=7e-151) putative peroxidase [Solanum tuberosum]; (*ATH) AT4G37530.1 (e_value=8e-127)  Symbol: None | peroxidase, putative, similar to peroxidase (Arabidopsis thaliana) gi:1402906:emb:CAA66958; identical to Pfam profile PF00141: Peroxidase; identical to cDNA peroxidase ATP37 GI:18874553 | chr4:17634778-17636282 FORWARD | Aliases: F19F... ; (*SWP) sp|Q9SZE7|PER51_ARATH (e_value=7e-126) Peroxidase 51 OS=Arabidopsis thaliana GN=PER51; ">
      <seq>cggctcggggcataacccattgtacttaattttatagccagagaaattaaatgggtcgtctaaatcttcttatgtcagtattattatcaattttatcagttagtattgtgttgatgcctaacttggcatctgcacaattaaagaccaattattacgccaatatttgtcctaatgttgaatccattgttagaaatgttgttaaccagaaattcaaacaaacttttgtcactgtccctgctgttctccgtctcttcttccatgattgctttgttgagggatgtgatgcttcagtgattgtatcatcaacaccagggaacacagctgagaaggatcattcagataatctatcattggcaggagatggatttgatactgtaattaaagccaaagccgctgttgattcaaactcacgttgtaaaaataaagtctcttgtgctgacattctcgctttagccaccagagatgtcattcagctgtctgggggaccatggtacccagtggaattaggaaggcttgatgggttcacatcaaaagcatcgaatgtggaagggaagctaccaaaaccaacattcaatctcaatcaactcaattctatgtttgcctctcatggtctaactcaggctgacatgatcgccctttctgcggcccattctgttggtttttctcattgtggcaaattttccaaccggatctacaacttcagccctaaaaatccaatagacccaacccttaacaagcaatatgcagcccaattacaagggatgtgtccaaggaatgttgacccaagaatagccattgacatggatcccaaaactccaaggacatttgacaataattactacaaaaatttacaacaaggtatgggcctattcacgtcagatcaagtgttgtatacagacaaaaggtccaagggaactgtggatctttgggccagtaactcaaaatcattccaaaatgcttttgtaactgcaatgacaaaactgggccgagttggtgtgaagacggggaggaacggaaatattcggtttgattgtggaagaatgaattgaagtgacattttacacaaatggccaatacttatagattctgtcccagttagcttaatggattaaatttgtcgaataaattaaaattttattttaattacgcaaaaattagttcgttgagtgttgtcaaggataggagtttatttatatttttatttgtaggaaggtgagtcctgaataaggggattagtcttgaaccttctaatgtttatatgaaaaataacagtcctattgtgggatgtgtaattgttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0053H21-RnoJv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0053H21.1" temp_strand="-" temp_description="C02SLe0053H21.1  AC226516.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0053H21 sequenced_by:kribb upload_account_name:korea">
        <position start="54621" stop="51614"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54321" g_stop="54056" g_length="266"/>
          <reference_exon_boundary r_type="cDNA" r_start="10" r_stop="275" r_length="266" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="54055" i_stop="53887" i_length="169">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="53886" g_stop="53686" g_length="201"/>
          <reference_exon_boundary r_type="cDNA" r_start="276" r_stop="476" r_length="201" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="53685" i_stop="53582" i_length="104">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="53581" g_stop="53416" g_length="166"/>
          <reference_exon_boundary r_type="cDNA" r_start="477" r_stop="642" r_length="166" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="53415" i_stop="52570" i_length="846">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.927" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="52569" g_stop="51914" g_length="656"/>
          <reference_exon_boundary r_type="cDNA" r_start="643" r_stop="1298" r_length="656" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0053H21.1" gen_strand="-" ref_id="SGN-U580841" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>1289</cumulative_length_of_scored_exons>
        <coverage percentage="0.993" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0053H21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U580841" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54321" e_stop="54056"/>
          <exon e_start="53886" e_stop="53686"/>
          <exon e_start="53581" e_stop="53416"/>
          <exon e_start="52569" e_stop="51914"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCATAACCCATTGTACTTAATTTTATAGCCAGAGAAATTAAATGGGTCGTCTAAATCTTCTTATGTCAGTATTATTATCAATTTTATCAGTTAGTATTGTGTTGATGCCTAACTTGGCATCTGCACAATTAAAGACCAATTATTACGCCAATATTTGTCCTAATGTTGAATCCATTGTTAGAAATGTTGTTAACCAGAAATTCAAACAAACTTTTGTCACTGTCCCTGCTGTTCTCCGTCTCTTCTTCCATGATTGCTTTGTTGAGGTACGTTTATTAACTACTCTGTTCCATTAATTTCTAATCATGATACTGTTGAGAGTCTTACACGCGATACGTGTGAATTTGAGTTTCGTTCTACAATATTAATCCCTTTCCCCCAATGGTTCAAGCATTTAGAAAAGAGACTTACGTTTATTTTTGTAATTGGAACTAGGGATGTGATGCTTCAGTGATTGTATCATCAACACCAGGGAACACAGCTGAGAAGGATCATTCAGATAATCTATCATTGGCAGGAGATGGATTTGATACTGTAATTAAAGCCAAAGCCGCTGTTGATTCAAACTCACGTTGTAAAAATAAAGTCTCTTGTGCTGACATTCTCGCTTTAGCCACCAGAGATGTCATTCAGCTGGTTAGTATAAATAATTTATTTACATTCTTAGGTGACATGATCAAGTTAATGTTGTCACTATCACTATATATAGAAATTAAACTCATCTTGTAACATGCGTGTAGTCTGGGGGACCATGGTACCCAGTGGAATTAGGAAGGCTTGATGGGTTCACATCAAAAGCATCGAATGTGGAAGGGAAGCTACCAAAACCAACATTCAATCTCAATCAACTCAATTCTATGTTTGCCTCTCATGGTCTAACTCAGGCTGACATGATCGCCCTTTCTGGTAATTCTGATGTTAATTACTTTCTTTATATAACTATTAATTAATTGTTAATTGTTATATTTAGTAGTTGATCTAGCTAGCTGTTTTGAAAATTCTGCTTTCAATATCTGAAGCAAGCAAGCAGATTTTAAAACAAATATAATATATAAAAAGGTTTATTTCGCTAAAGAAAATAAAATGCTCTATATAGATAGTAATATATTACTCAGTTTCTTTTTTAGTAAGTAGAAGAGAACTAGATTATAAATTTCAAAAGTTTATTTTTTTAAAAAAAAATTATGTACTAAGTCAAACTAACTTATACTCCTTCGATTCACAAATAGTTATACTAAAAAGGATGTTCAAGATTAATTGTCAATTTAAACGTTCAAGAAATAATTAGTTTTTTTTCTTAATTCTACCCTTAATAATTACTTCATTTTAATCAATTGAAAAACTATGTAGACTTTTGATATTCTTGCTATTATAAAATTATATTAGTCAAATTATACTTTGCATTAAATTTTTCTTGTCGAAAGTACATGATTTTACTCAGATAAATAATTGTGGACGGAGAAAATATGAAATAGGATTATGAGAGTATTAAATATTATTCAAACACTCGAATCATGGTCTTAAATTCCTTTTAATAAGTCTCTTATCATTTTTCATTTGACCTTTTGCTTTTTAGCACGTGTTATTGATTCAGACGTAACCATTACTCAATTATTTGGTTCATTATACTCCAGCCAGCTCAGTAGACAAAAGGGAAAAAAATAAGTCCAGACATTATCATGAGCATCTTCCACAATGTAATAATTTTATATGCTTGATCGAGAAATTAAGATCTCTTGCTCACTTATGCAGCGGCCCATTCTGTTGGTTTTTCTCATTGTGGCAAATTTTCCAACCGGATCTACAACTTCAGCCCTAAAAATCCAATAGACCCAACCCTTAACAAGCAATATGCAGCCCAATTACAAGGGATGTGTCCAAGGAATGTTGACCCAAGAATAGCCATTGACATGGATCCCAAAACTCCAAGGACATTTGACAATAATTACTACAAAAATTTACAACAAGGTATGGGCCTATTCACGTCAGATCAAGTGTTGTATACAGACAAAAGGTCCAAGGGAACTGTGGATCTTTGGGCCAGTAACTCAAAATCATTCCAAAATGCTTTTGTAACTGCAATGACAAAACTGGGCCGAGTTGGTGTGAAGACGGGGAGGAACGGAAATATTCGGTTTGATTGTGGAAGAATGAATTGAAGTGACATTTTACACAAATGGCCAATACTTATAGATTCTGTCCCAGTTAGCTTAATGGATTAAATTTGTCGAATAAATTAAAATTTTATTTTAATTACGCAAAAATTAGTTCGTTGAGTGTTGTCAAGGATAGGAGTTTATTTATATTTTTATTTGTAGGAAGGTGAGTCCTGAATAAGGGGATTAGTCTTGAACCTTCTAATGTTTATATGAAAAATAACAGTCCTATTGTGGGATGTGTAATTGTTG</genome_strand>
        <mrna_strand>GCATAACCCATTGTACTTAATTTTATAGCCAGAGAAATTAAATGGGTCGTCTAAATCTTCTTATGTCAGTATTATTATCAATTTTATCAGTTAGTATTGTGTTGATGCCTAACTTGGCATCTGCACAATTAAAGACCAATTATTACGCCAATATTTGTCCTAATGTTGAATCCATTGTTAGAAATGTTGTTAACCAGAAATTCAAACAAACTTTTGTCACTGTCCCTGCTGTTCTCCGTCTCTTCTTCCATGATTGCTTTGTTGAG.........................................................................................................................................................................GGATGTGATGCTTCAGTGATTGTATCATCAACACCAGGGAACACAGCTGAGAAGGATCATTCAGATAATCTATCATTGGCAGGAGATGGATTTGATACTGTAATTAAAGCCAAAGCCGCTGTTGATTCAAACTCACGTTGTAAAAATAAAGTCTCTTGTGCTGACATTCTCGCTTTAGCCACCAGAGATGTCATTCAGCTG........................................................................................................TCTGGGGGACCATGGTACCCAGTGGAATTAGGAAGGCTTGATGGGTTCACATCAAAAGCATCGAATGTGGAAGGGAAGCTACCAAAACCAACATTCAATCTCAATCAACTCAATTCTATGTTTGCCTCTCATGGTCTAACTCAGGCTGACATGATCGCCCTTTCTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGCCCATTCTGTTGGTTTTTCTCATTGTGGCAAATTTTCCAACCGGATCTACAACTTCAGCCCTAAAAATCCAATAGACCCAACCCTTAACAAGCAATATGCAGCCCAATTACAAGGGATGTGTCCAAGGAATGTTGACCCAAGAATAGCCATTGACATGGATCCCAAAACTCCAAGGACATTTGACAATAATTACTACAAAAATTTACAACAAGGTATGGGCCTATTCACGTCAGATCAAGTGTTGTATACAGACAAAAGGTCCAAGGGAACTGTGGATCTTTGGGCCAGTAACTCAAAATCATTCCAAAATGCTTTTGTAACTGCAATGACAAAACTGGGCCGAGTTGGTGTGAAGACGGGGAGGAACGGAAATATTCGGTTTGATTGTGGAAGAATGAATTGAAGTGACATTTTACACAAATGGCCAATACTTATAGATTCTGTCCCAGTTAGCTTAATGGATTAAATTTGTCGAATAAATTAAAATTTTATTTTAATTACGCAAAAATTAGTTCGTTGAGTGTTGTCAAGGATAGGAGTTTATTTATATTTTTATTTGTAGGAAGGTGAGTCCTGAATAAGGGGATTAGTCTTGAACCTTCTAATGTTTATATGAAAAATAACAGTCCTATTGTGGGATGTGTAATTGTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0053H21-RnoJv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U567764" ref_strand="+" ref_description="SGN-U567764 Tomato 200607#2 [2 ESTs aligned] (*GB) gi|82623371|gb|ABB87100.1| (e_value=5e-27) unknown; (*ATH) AT5G67390.2 (e_value=2e-16)  Symbol: None | expressed protein, similar to expressed protein [Arabidopsis thaliana] (TAIR:At5g57340.2); similar to expressed protein [Arabidopsis thaliana] (TAIR:At5g57340.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)... ; ">
      <seq>gaaagtaaaaaaaaatatgttatcgtgattagaaaatgtttaaatattatgtgcactgctggacttgtctgggggcatctctttcacaaaactcaaaccacattggctaaggggactggatttgtttggcatgcttcctccctagtcccccccctacatacctatttcaccttctttttttttctatcaaaactccaaaaatactacaacatttgctttgatttctgtgtgataaatgagaatcttaaattcttccttatcagtcctaataatgatattttattctttcctcttttaacttttatacatatatatatatatctttgggggtgctcactttggcagtatatactagaggcaaaattaaaagtgggatgttaataaactctctcaaacaaagaaaaagcctaaaagtctccaagttttggtttttaaactcctcaaagttcttcatttcgatcaataaagtacgacgttacaggtactaatatacattcccaattccggagatatatcgagtcaaatcgaagaaacatcgttctcttcctcttctttctggctatttttatttttaaaatggagaagcttatcaatccttacgataaggaatacatgaagatggcaatgttaaagcatgaagagatcttcaaagaacaggtgtacgaactgcatcgtctatatcaaacacagaaattgctgatgaggaacatgtncagtagtactaataatcggcctcaacaagtcatgaaagatcatcatcaagtagtggtaaaccatttagattcaaacaaaagataactgctcgtcaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0053H21-RnoJv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0053H21.1" temp_strand="+" temp_description="C02SLe0053H21.1  AC226516.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0053H21 sequenced_by:kribb upload_account_name:korea">
        <position start="68223" stop="70491"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="68516" g_stop="69000" g_length="485"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="481" r_length="481" r_score="0.930"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="69001" i_stop="69790" i_length="790">
            <donor d_prob="0.994" d_score="0.81"/>
            <acceptor a_prob="0.996" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="69791" g_stop="69965" g_length="175"/>
          <reference_exon_boundary r_type="cDNA" r_start="482" r_stop="657" r_length="176" r_score="0.954"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="69966" i_stop="70047" i_length="82">
            <donor d_prob="1.000" d_score="0.96"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="70048" g_stop="70132" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="658" r_stop="742" r_length="85" r_score="0.965"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0053H21.1" gen_strand="+" ref_id="SGN-U567764" ref_strand="+">
        <total_alignment_score>0.940</total_alignment_score>
        <cumulative_length_of_scored_exons>745</cumulative_length_of_scored_exons>
        <coverage percentage="0.921" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0053H21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U567764" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="68516" e_stop="69000"/>
          <exon e_start="69791" e_stop="69965"/>
          <exon e_start="70048" e_stop="70132"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAAGTTAA-AAAAATATGTTATCGTGATTAGAAAATGTTTAAATATTATGTGCACTGCTGGACTTGTCTGGGGGCATCTCTTTCACAAAACTCAAACCACATTGGCTAAGGGGACTGGATTTGTTTGGCATGCTTCCTCCCTAGT-CCCCCCCTACATACCTATTTCACCCTCTTTTTTTTCCTATC-AAACTCCAAAAATACAACAACATTTGCTTTGATTTCCGTGTGCTAAATGAGAATCTTAAATTCTTCCTTATCAGTCCTAATAATGATATTTTATTCTTTCCTCTTTTAATTTTATATATATAATATATATATATATATATATCTTTGGGGGTGCTCACTTTGGCAGTATATACTAGAGGCAAAATTAAAAGTGGGATGTTAATAAACTCTCTCAAACAAAGAAAAAGCCTAAAAGTCTCCAAGTTTTGGTTTTTAAACTCCTCAAAGTTCTTCTATTCGATCAATAAAGT---ACGTTGCAGGTAAGGACGCTGAATTCAATCATAAAAAAATATGTATTTTTTCTTGCTCTTTCTTTCTTTCTTTGGTACTCTATAATTTAAGTTCATTTTTATAATTTACATGAACATTATTGTTGCATGCTTAGCGTCGATCAACGACAAAAATAATCAAAAATATCCATCTGATCATCAATTAATAGCTAGCAAATTTCTTTGATACACGGAATGGAATTATATGTTTTCTAATTACCTATCTAATGAAAACTAAAAATATCGAAAACGTATTAACAAAAAAAAAGAAGTGAGAAAAGCATGTGGCATGCCGTAAACTGGTAACAGAGAATAGTTTAATTTGTCGAAAAATATCTGTATTTTTTTTAGGATATATGAATTAACTTGATTTTACAAGAATATTACTACTGTTGTTATGATGGTGATATATATATATATATGTTGATCATGTCTTGCTTTATAATAGGACATATATAGATGATTTATGTATATAATGCTGTTGTTATTATTATTGGTGTGGCCCAAATTGACAGTAATTTGTATGGAAAAGAACGAACAATAAAAACAAACAAAATCACACATGCCAAAATAGGGGTACTGCGTTAATCTCCTTCAGTCATAAAAAAGTTGTGCAATAAATTGGGAAGCTTGATATTTTCTTAGATCATAGCCTTTAACGTCTATCAACTTCTTTTCTATTATTATTATTATTATTACAACAATTAAATAGCTACTATTTCTTTATTCATTTTTCAATTTTTTTTTAAAAAAAAACTTACTTGATTTCTGCTTCTTTTAGGTACTAATATACATTCCCAATTCCGGAGATACATTGAGTCAAATCGAAGAAACATCGTTCTCTTCCTCTTCTTTCTGTCT-TTTTTATTTTAAAAATGGAGAAGCTTATCAATCCTTACGATAAGGAATACATGAAGATGGCGATGTTAAAGCATGAAGAGATCTTCAGAGAACAGGTAAATTTATATTATGTTTCGTTCTGAATCAACTGACTCTAGATTTTATTTATTAATTGCTTAACGACATGTGTTTTGTCAGGTGTACGAACTGCATCGTCTATATCAAACACAGAAATTGCTGATGAGAAACATGTCAAGTAGTACTAATAATCGGCCTCAACAAG</genome_strand>
        <mrna_strand>GAAAGTAAAAAAAAATATGTTATCGTGATTAGAAAATGTTTAAATATTATGTGCACTGCTGGACTTGTCTGGGGGCATCTCTTTCACAAAACTCAAACCACATTGGCTAAGGGGACTGGATTTGTTTGGCATGCTTCCTCCCTAGTCCCCCCCCTACATACCTATTTCACCTTCTTTTTTTTTCTATCAAAACTCCAAAAATACTACAACATTTGCTTTGATTTCTGTGTGATAAATGAGAATCTTAAATTCTTCCTTATCAGTCCTAATAATGATATTTTATTCTTTCCTCTTTT-A----A-CT-T-T--TATACATATATATATATATCTTTGGGGGTGCTCACTTTGGCAGTATATACTAGAGGCAAAATTAAAAGTGGGATGTTAATAAACTCTCTCAAACAAAGAAAAAGCCTAAAAGTCTCCAAGTTTTGGTTTTTAAACTCCTCAAAGTTCTTCATTTCGATCAATAAAGTACGACGTTACAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACTAATATACATTCCCAATTCCGGAGATATATCGAGTCAAATCGAAGAAACATCGTTCTCTTCCTCTTCTTTCTGGCTATTTTTATTTTTAAAATGGAGAAGCTTATCAATCCTTACGATAAGGAATACATGAAGATGGCAATGTTAAAGCATGAAGAGATCTTCAAAGAACAG..................................................................................GTGTACGAACTGCATCGTCTATATCAAACACAGAAATTGCTGATGAGGAACATGTNCAGTAGTACTAATAATCGGCCTCAACAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0053H21-RnoJv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U588484" ref_strand="+" ref_description="SGN-U588484 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>ctggacttgtctgggggcatctctttcacaaaactcaaaccacattggctaaggggactggatttgtttggcatgcttcctccctagtccccccctacatacctatttcaccctcttttttttcctatcaaactccaaaaatacaacaacatttgctttgatttccgtgtgctaaatgagaatcttaaattcttccttatcagtcctaataatgatattttattctttcctcttttaattttatatatataatatatatatatatatatatctttgggggtgctcactttggcagtatatactagaggcaaaattaaaagtgggatgttaataaactctctcaaacaaagaaaaagcctaaaagtctccaagttttggtttttaaactcctcaaagttcttctattcgatcaataaagtactaatatacattcccaattccggagatacattgagtcaaatcgaagaaacatcgttctcttcctcttctttct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0053H21-RnoJv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0053H21.1" temp_strand="+" temp_description="C02SLe0053H21.1  AC226516.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0053H21 sequenced_by:kribb upload_account_name:korea">
        <position start="68273" stop="70166"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="68573" g_stop="68989" g_length="417"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="417" r_length="417" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="68990" i_stop="69790" i_length="801">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="69791" g_stop="69866" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="418" r_stop="493" r_length="76" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0053H21.1" gen_strand="+" ref_id="SGN-U588484" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>493</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0053H21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U588484" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="68573" e_stop="68989"/>
          <exon e_start="69791" e_stop="69866"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGGACTTGTCTGGGGGCATCTCTTTCACAAAACTCAAACCACATTGGCTAAGGGGACTGGATTTGTTTGGCATGCTTCCTCCCTAGTCCCCCCCTACATACCTATTTCACCCTCTTTTTTTTCCTATCAAACTCCAAAAATACAACAACATTTGCTTTGATTTCCGTGTGCTAAATGAGAATCTTAAATTCTTCCTTATCAGTCCTAATAATGATATTTTATTCTTTCCTCTTTTAATTTTATATATATAATATATATATATATATATATCTTTGGGGGTGCTCACTTTGGCAGTATATACTAGAGGCAAAATTAAAAGTGGGATGTTAATAAACTCTCTCAAACAAAGAAAAAGCCTAAAAGTCTCCAAGTTTTGGTTTTTAAACTCCTCAAAGTTCTTCTATTCGATCAATAAAGTACGTTGCAGGTAAGGACGCTGAATTCAATCATAAAAAAATATGTATTTTTTCTTGCTCTTTCTTTCTTTCTTTGGTACTCTATAATTTAAGTTCATTTTTATAATTTACATGAACATTATTGTTGCATGCTTAGCGTCGATCAACGACAAAAATAATCAAAAATATCCATCTGATCATCAATTAATAGCTAGCAAATTTCTTTGATACACGGAATGGAATTATATGTTTTCTAATTACCTATCTAATGAAAACTAAAAATATCGAAAACGTATTAACAAAAAAAAAGAAGTGAGAAAAGCATGTGGCATGCCGTAAACTGGTAACAGAGAATAGTTTAATTTGTCGAAAAATATCTGTATTTTTTTTAGGATATATGAATTAACTTGATTTTACAAGAATATTACTACTGTTGTTATGATGGTGATATATATATATATATGTTGATCATGTCTTGCTTTATAATAGGACATATATAGATGATTTATGTATATAATGCTGTTGTTATTATTATTGGTGTGGCCCAAATTGACAGTAATTTGTATGGAAAAGAACGAACAATAAAAACAAACAAAATCACACATGCCAAAATAGGGGTACTGCGTTAATCTCCTTCAGTCATAAAAAAGTTGTGCAATAAATTGGGAAGCTTGATATTTTCTTAGATCATAGCCTTTAACGTCTATCAACTTCTTTTCTATTATTATTATTATTATTACAACAATTAAATAGCTACTATTTCTTTATTCATTTTTCAATTTTTTTTTAAAAAAAAACTTACTTGATTTCTGCTTCTTTTAGGTACTAATATACATTCCCAATTCCGGAGATACATTGAGTCAAATCGAAGAAACATCGTTCTCTTCCTCTTCTTTCT</genome_strand>
        <mrna_strand>CTGGACTTGTCTGGGGGCATCTCTTTCACAAAACTCAAACCACATTGGCTAAGGGGACTGGATTTGTTTGGCATGCTTCCTCCCTAGTCCCCCCCTACATACCTATTTCACCCTCTTTTTTTTCCTATCAAACTCCAAAAATACAACAACATTTGCTTTGATTTCCGTGTGCTAAATGAGAATCTTAAATTCTTCCTTATCAGTCCTAATAATGATATTTTATTCTTTCCTCTTTTAATTTTATATATATAATATATATATATATATATATCTTTGGGGGTGCTCACTTTGGCAGTATATACTAGAGGCAAAATTAAAAGTGGGATGTTAATAAACTCTCTCAAACAAAGAAAAAGCCTAAAAGTCTCCAAGTTTTGGTTTTTAAACTCCTCAAAGTTCTTCTATTCGATCAATAAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACTAATATACATTCCCAATTCCGGAGATACATTGAGTCAAATCGAAGAAACATCGTTCTCTTCCTCTTCTTTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0053H21-RnoJv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U567766" ref_strand="+" ref_description="SGN-U567766 Tomato 200607#2 [31 ESTs aligned] (*GB) gi|82623371|gb|ABB87100.1| (e_value=5e-87) unknown; (*ATH) AT5G67390.2 (e_value=8e-17)  Symbol: None | expressed protein, similar to expressed protein [Arabidopsis thaliana] (TAIR:At5g57340.2); similar to expressed protein [Arabidopsis thaliana] (TAIR:At5g57340.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)... ; ">
      <seq>gtttgctttgatttccgtgtgctaaatgagaatcttaaattcttccttatcagtcctaataatgatattttattctttcctcttttaattttatatatataatatatatatatatatatatctttgggggtgctcactttggcagtatatactagaggcaaaattaaaagtgggatgttaataaactctctcaaacaaagaaaaagcctaaaagtctccaagttttggtttttaaactcctcaaagttcttctattcgatcaataaagtacgttgcaggtactaatatacattcccaattccggagatacattgagtcaaatcgaagaaacatcgttctcttcctcttctttctgtcttttttattttaaaaatggagaagcttatcaatccttacgataaggaatacatgaagatggcgatgttaaagcatgaagagatcttcagagaacaggtgtacgaactgcatcgtctatatcaaacacagaaattgctgatgagaaacatgtcaagtagtactaataatcggcctcaacaagatcatcatcaagtagtggtaaaccaattagactcgaacaaaaagataactgctcgtcaatgtattgacttggaaataaggccaaatacagacgaagaacacattgcagaatcaggtggtgaagatgatactcatgaattggaattaacattagggctatcaagttacaacgttcgtcgaaggagaaaaacagctcattttgattcttcttcaccaagtttttcttcatctaattcaacaggatctgcttctagccaaataaagaacactacgacaaatttagtgagaaattcgaggaatattgaaggtagtaaatggggacttgaagagaaattgccagtttcgaataattttcagattggtgcaaaaagttcccaaagtaatcaaaatgttgatcaagagcaatatagatcccaagattcgttgaataatcctccttggctttttcaagttttgagtttgaatatgacgtaaaaaaaaaaactactattatttaattatgatgctgatcgatgattaattagtcgatcggatgtgataagattttagactttcatcctaccgatcgactacttatgtaatttaattttgtgtgaaattttaggatcatcttttgtttaattctgatctctttgttttaatttgctaacggtattttcgggattcaacagcccaaatatagttgatttggat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0053H21-RnoJv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0053H21.1" temp_strand="+" temp_description="C02SLe0053H21.1  AC226516.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0053H21 sequenced_by:kribb upload_account_name:korea">
        <position start="68424" stop="71121"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="68723" g_stop="69000" g_length="278"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="278" r_length="278" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="69001" i_stop="69790" i_length="790">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="69791" g_stop="69965" g_length="175"/>
          <reference_exon_boundary r_type="cDNA" r_start="279" r_stop="453" r_length="175" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="69966" i_stop="70047" i_length="82">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="70048" g_stop="70821" g_length="774"/>
          <reference_exon_boundary r_type="cDNA" r_start="454" r_stop="1230" r_length="777" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0053H21.1" gen_strand="+" ref_id="SGN-U567766" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>1227</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0053H21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U567766" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="68723" e_stop="69000"/>
          <exon e_start="69791" e_stop="69965"/>
          <exon e_start="70048" e_stop="70821"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTGCTTTGATTTCCGTGTGCTAAATGAGAATCTTAAATTCTTCCTTATCAGTCCTAATAATGATATTTTATTCTTTCCTCTTTTAATTTTATATATATAATATATATATATATATATATCTTTGGGGGTGCTCACTTTGGCAGTATATACTAGAGGCAAAATTAAAAGTGGGATGTTAATAAACTCTCTCAAACAAAGAAAAAGCCTAAAAGTCTCCAAGTTTTGGTTTTTAAACTCCTCAAAGTTCTTCTATTCGATCAATAAAGTACGTTGCAGGTAAGGACGCTGAATTCAATCATAAAAAAATATGTATTTTTTCTTGCTCTTTCTTTCTTTCTTTGGTACTCTATAATTTAAGTTCATTTTTATAATTTACATGAACATTATTGTTGCATGCTTAGCGTCGATCAACGACAAAAATAATCAAAAATATCCATCTGATCATCAATTAATAGCTAGCAAATTTCTTTGATACACGGAATGGAATTATATGTTTTCTAATTACCTATCTAATGAAAACTAAAAATATCGAAAACGTATTAACAAAAAAAAAGAAGTGAGAAAAGCATGTGGCATGCCGTAAACTGGTAACAGAGAATAGTTTAATTTGTCGAAAAATATCTGTATTTTTTTTAGGATATATGAATTAACTTGATTTTACAAGAATATTACTACTGTTGTTATGATGGTGATATATATATATATATGTTGATCATGTCTTGCTTTATAATAGGACATATATAGATGATTTATGTATATAATGCTGTTGTTATTATTATTGGTGTGGCCCAAATTGACAGTAATTTGTATGGAAAAGAACGAACAATAAAAACAAACAAAATCACACATGCCAAAATAGGGGTACTGCGTTAATCTCCTTCAGTCATAAAAAAGTTGTGCAATAAATTGGGAAGCTTGATATTTTCTTAGATCATAGCCTTTAACGTCTATCAACTTCTTTTCTATTATTATTATTATTATTACAACAATTAAATAGCTACTATTTCTTTATTCATTTTTCAATTTTTTTTTAAAAAAAAACTTACTTGATTTCTGCTTCTTTTAGGTACTAATATACATTCCCAATTCCGGAGATACATTGAGTCAAATCGAAGAAACATCGTTCTCTTCCTCTTCTTTCTGTCTTTTTTATTTTAAAAATGGAGAAGCTTATCAATCCTTACGATAAGGAATACATGAAGATGGCGATGTTAAAGCATGAAGAGATCTTCAGAGAACAGGTAAATTTATATTATGTTTCGTTCTGAATCAACTGACTCTAGATTTTATTTATTAATTGCTTAACGACATGTGTTTTGTCAGGTGTACGAACTGCATCGTCTATATCAAACACAGAAATTGCTGATGAGAAACATGTCAAGTAGTACTAATAATCGGCCTCAACAAGATCATCATCAAGTAGTGGTAAACCAATTAGACTCGAACAAAAAGATAACTGCTCGTCAATGTATTGACTTGGAAATAAGGCCAAATACAGACGAAGAACACATTGCAGAATCAGGTGGTGAAGATGATACTCATGAATTGGAATTAACATTAGGGCTATCAAGTTACAACGTTCGTCGAAGGAGAAAAACAGCTCATTTTGATTCTTCTTCACCAAGTTTTTCTTCATCTAATTCAACAGGATCTGCTTCTAGCCAAATAAAGAACACTACGACAAATTTAGTGAGAAATTCGAGGAATATTGAAGGTAGTAAATGGGGACTTGAAGAGAAATTGCCAGTTTCGAATAATTTTCAGATTGGTGCAAGAAGTTCACAAAGTAATCAAAATGTTGATCAAGAGCAATATAGATCACAAGATTCGTTGAATAATCCTCCTTGGCTTTTTCAAGTTTTGAGTTTGAATATGACGT-AAAAAAAAAACTACTATTATTTAATTATGATGCTGATCGATGATTAATTAGTCGATCGGATGTGATAAGATTTTAGACTTTCATCCTACCGATCGACTACTTATGTAATTTAATTTTGTGTGAAATTTTAGTATCATCTTTTGTTTAATTCTAATCTCTTTG-TTTAATTTGCTAACGGTATTTTCGGGATTCAACAG-CCAAATATAGTTGATTTGGAT</genome_strand>
        <mrna_strand>GTTTGCTTTGATTTCCGTGTGCTAAATGAGAATCTTAAATTCTTCCTTATCAGTCCTAATAATGATATTTTATTCTTTCCTCTTTTAATTTTATATATATAATATATATATATATATATATCTTTGGGGGTGCTCACTTTGGCAGTATATACTAGAGGCAAAATTAAAAGTGGGATGTTAATAAACTCTCTCAAACAAAGAAAAAGCCTAAAAGTCTCCAAGTTTTGGTTTTTAAACTCCTCAAAGTTCTTCTATTCGATCAATAAAGTACGTTGCAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACTAATATACATTCCCAATTCCGGAGATACATTGAGTCAAATCGAAGAAACATCGTTCTCTTCCTCTTCTTTCTGTCTTTTTTATTTTAAAAATGGAGAAGCTTATCAATCCTTACGATAAGGAATACATGAAGATGGCGATGTTAAAGCATGAAGAGATCTTCAGAGAACAG..................................................................................GTGTACGAACTGCATCGTCTATATCAAACACAGAAATTGCTGATGAGAAACATGTCAAGTAGTACTAATAATCGGCCTCAACAAGATCATCATCAAGTAGTGGTAAACCAATTAGACTCGAACAAAAAGATAACTGCTCGTCAATGTATTGACTTGGAAATAAGGCCAAATACAGACGAAGAACACATTGCAGAATCAGGTGGTGAAGATGATACTCATGAATTGGAATTAACATTAGGGCTATCAAGTTACAACGTTCGTCGAAGGAGAAAAACAGCTCATTTTGATTCTTCTTCACCAAGTTTTTCTTCATCTAATTCAACAGGATCTGCTTCTAGCCAAATAAAGAACACTACGACAAATTTAGTGAGAAATTCGAGGAATATTGAAGGTAGTAAATGGGGACTTGAAGAGAAATTGCCAGTTTCGAATAATTTTCAGATTGGTGCAAAAAGTTCCCAAAGTAATCAAAATGTTGATCAAGAGCAATATAGATCCCAAGATTCGTTGAATAATCCTCCTTGGCTTTTTCAAGTTTTGAGTTTGAATATGACGTAAAAAAAAAAACTACTATTATTTAATTATGATGCTGATCGATGATTAATTAGTCGATCGGATGTGATAAGATTTTAGACTTTCATCCTACCGATCGACTACTTATGTAATTTAATTTTGTGTGAAATTTTAGGATCATCTTTTGTTTAATTCTGATCTCTTTGTTTTAATTTGCTAACGGTATTTTCGGGATTCAACAGCCCAAATATAGTTGATTTGGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0053H21-RnoJv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U588488" ref_strand="+" ref_description="SGN-U588488 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|82623371|gb|ABB87100.1| (e_value=9e-42) unknown; ">
      <seq>aaaacaaaaaatgatactaaaatttcccacaaaattaaattacataagtagtcgatcgggaggaggaaagtctaaaatcttatcccatccgatcgactaattaatcctcgatcaccatcaaaattaaataaaagtattttttttttttacgtcatattcaaacccaaaacttgaaaaagccaagggggattattcaacgaatctggggatctatattgcccttgatcaacattttgattactttgggaacttcttgccccaatctgaaaattattcaaaacgggcaatttcccttcaagtccccatttactaccttcaaaattccccgaatttcccacaaaatttgtcgaagggttctttatttggcaaaaaacaaatccggttgaattaaaagaaaaaaaacttggggaaaaaaaatcaaaatgagctgtttttccccttcgacaaacgttgtaacttgatacccctaaggttaattccaattcaggagtatcatcttccccccctgattctgcaaggggttcttcctcggtatttggccttatttccaagtcaatactttgacgagcagttatctttttgttcgagtctaattggtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0053H21-RnoJv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0053H21.1" temp_strand="-" temp_description="C02SLe0053H21.1  AC226516.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0053H21 sequenced_by:kribb upload_account_name:korea">
        <position start="71049" stop="69853"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70750" g_stop="70153" g_length="598"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="599" r_length="599" r_score="0.913"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0053H21.1" gen_strand="-" ref_id="SGN-U588488" ref_strand="+">
        <total_alignment_score>0.913</total_alignment_score>
        <cumulative_length_of_scored_exons>598</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0053H21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U588488" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70750" e_stop="70153"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAACAAAAGATGATACTAAAATTTCACACAAAATTAAATTACATAAGTAGTCGATCGGTAGGATGAAAGTCTAAAATCTTATCACATCCGATCGACTAATTAATCATCGATCAGCATCATAATTAAATAATAGTA-GTTTTTTTTTTACGTCATATTCAAACTCAAAACTTGAAAAAGCCAAGGAGGATTATTCAACGAATCTTGTGATCTATATTGCTCTTGATCAACATTTTGATTACTTTGTGAACTTCTTGCACCAATCTGAAAATTATTCGAAACTGGCAATTTCTCTTCAAGTCCCCATTTACTACCTTCAATATTCCTCGAATTTCTCACTAAATTTGTCGTAGTGTTCTTTATTTGGCTAGAAGCAGATCCTGTTGAATTAGATGAAGAAAAACTTGGTGAAGAAGAATCAAAATGAGCTGTTTTTCTCCTTCGACGAACGTTGTAACTTGATAGCCCTAATGTTAATTCCAATTCATGAGTATCATCTTCACCACCTGATTCTGCAATGTGTTCTTCGTCTGTATTTGGCCTTATTTCCAAGTCAATACATTGACGAGCAGTTATCTTTTTGTTCGAGTCTAATTGGTT</genome_strand>
        <mrna_strand>AAAACAAAAAATGATACTAAAATTTCCCACAAAATTAAATTACATAAGTAGTCGATCGGGAGGAGGAAAGTCTAAAATCTTATCCCATCCGATCGACTAATTAATCCTCGATCACCATCAAAATTAAATAAAAGTATTTTTTTTTTTTACGTCATATTCAAACCCAAAACTTGAAAAAGCCAAGGGGGATTATTCAACGAATCTGGGGATCTATATTGCCCTTGATCAACATTTTGATTACTTTGGGAACTTCTTGCCCCAATCTGAAAATTATTCAAAACGGGCAATTTCCCTTCAAGTCCCCATTTACTACCTTCAAAATTCCCCGAATTTCCCACAAAATTTGTCGAAGGGTTCTTTATTTGGCAAAAAACAAATCCGGTTGAATTAAAAGAAAAAAAACTTGGGGAAAAAAAATCAAAATGAGCTGTTTTTCCCCTTCGACAAACGTTGTAACTTGATACCCCTAAGGTTAATTCCAATTCAGGAGTATCATCTTCCCCCCCTGATTCTGCAAGGGGTTCTTCCTCGGTATTTGGCCTTATTTCCAAGTCAATACTTTGACGAGCAGTTATCTTTTTGTTCGAGTCTAATTGGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0053H21-RnoJv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U574292" ref_strand="+" ref_description="SGN-U574292 Tomato 200607#2 [6 ESTs aligned] (*GB) gi|147772913|emb|CAN71562.1| (e_value=1e-131) hypothetical; (*ATH) AT5G67385.1 (e_value=3e-124)  Symbol: None | similar to phototropic-responsive protein, putative [Arabidopsis thaliana] (TAIR:At3g49970.1); similar to hypothetical protein-like protein [Sorghum bicolor] (GB:AAO16690.1); contains InterPro domain BTB/POZ domain (InterPro:IPR000210... ; (*SWP) sp|Q682S0|RPT2_ARATH (e_value=2e-57) Root phototropism protein 2 OS=Arabidopsis thaliana GN=RPT2; ">
      <seq>tgaacttacagaagcaaagaaaatggcaacaaacatgtctttctattgtttgcttcattaggaaatagtttaagggaaaacgaatgaacatggttaaggcccgtaaaagactcgatcacccatggtggatgacatgttgatcttgataatgaacaaccttctactctaaacagtatgtccactaaaaaggagcttcttttctctgctacaaagaggacctctcaatggattttctcccaggagatcccaagtgatgtgactgtaaatgccgcaggaatctcctttacactacacaagttcccattagtttcaaagagtggataccataaggaagttggtctcggaatccaatgatgctgacgtttctacgatcgaaatccctgatatacctggtggaggagaggcatttgaatttgcagcaaagttttgttatggaataaattttgagataagcacaagaaacattgccttgctgagatgtgcagcagaatatcttgagatgacagaagactatgcagttgcaaatttggtgggaagaactgaggactactttagtgaagtaggaattgagagccttcatagtgctgttacaattttgcattcatcagaaaatcttattcccatttcagagaaagtgaaattggtgagccgctgcattgacacaattgcatatatagcctgtaaggataaccaattctccacatcaggttgagcagaagctggtatctatggattgacttcctccatgttttcgaacccgaagtctatagttaactggtggtcggaggatttaaccgtccttagaattgattttttccaaagggttctgattgcaatgatgggaaggggattcaagcagtatgcacttggaccaatattaatgctctatgcacagaagtctcttcgttgtttggaaatatttggaaagggaaggaaaaagattgaaccaaaacaagaacatgaaaaaagggttgttgtagaaaccatcgttggtcttctgccaagggagaaaaatgcattatccgttagcttttgtcaatgcttctccgagctgcaatatatctgcagaccacgatggctggcaggctcgacttggagaagaggatggattgcagcttggacaggctgtattggatgtatctgttaattccttcatattccttcagaggggacactttgtttgatgttgaaatcatgcagcttattgcgatgaatttccttgcctatgatatggaggaaaatcattgggagatgaagagtataatgagtctcattcattaagagacatggagcgagttggggaacttatggaaaattaccttgctaaaatagcttctgaccgtaatctatccatcacaagcttcattaatcttgctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0053H21-RnoJv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0053H21.1" temp_strand="-" temp_description="C02SLe0053H21.1  AC226516.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0053H21 sequenced_by:kribb upload_account_name:korea">
        <position start="77599" stop="75045"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="77299" g_stop="77073" g_length="227"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="227" r_length="227" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="77072" i_stop="76954" i_length="119">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="76953" g_stop="76884" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="228" r_stop="297" r_length="70" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="76883" i_stop="76505" i_length="379">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.965" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="76504" g_stop="75890" g_length="615"/>
          <reference_exon_boundary r_type="cDNA" r_start="298" r_stop="913" r_length="616" r_score="0.997"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="75889" i_stop="75809" i_length="81">
            <donor d_prob="0.753" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="75808" g_stop="75345" g_length="464"/>
          <reference_exon_boundary r_type="cDNA" r_start="914" r_stop="1377" r_length="464" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0053H21.1" gen_strand="-" ref_id="SGN-U574292" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>1376</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0053H21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U574292" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="77299" e_stop="77073"/>
          <exon e_start="76953" e_stop="76884"/>
          <exon e_start="76504" e_stop="75890"/>
          <exon e_start="75808" e_stop="75345"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAACTTACAGAAGCAAAGAAAATGGCAACAAACATGTCTTTCTATTGTTTGCTTCATTAGGAAATAGTTTAAGGGAAAACGAATGAACATGGTTAAGGCCCGTAAAAGACTCGATCACCCATGGTGGATGACATGTTGATCTTGATAATGAACAACCTTCTACTCTAAACAGTATGTCCACTAAAAAGGAGCTTCTTTTCTCTGCTACAAAGAGGACCTCTCAATGGTATGTGCTATTTTTGACTTCTTTATTTTCTACTTTCAAAAAGTAGCCTCTTCCATATATTATAGAATCATTACTCTGTTTTTCAAATTATTCGCCTAAATAATAATCTATCTTAACAGGATTTTCTCCCAGGAGATCCCAAGTGATGTGACTGTAAATGCCGCAGGAATCTCCTTTACACTACACAAGGTGCGTTATTTTTCTCTGCTTTCGTCATTAAGTCAACTGAACTTGGTGCACAATCCGAACTGTTGTTGGTTTTAGTTAAATTCCTAATTGGATTAGAATTATCGTCCCTTGGTCACATCTTACAACAGCAATAACAAAGTCAGTGTAATCCCAATATATATAGTGGGGTCTTGGGAGGGTGCGCAGCCTTACCCCTAACTTTATGGGATAGAGATGTTGTTTACGATTGACCACGGGCAACCTCCTCCTTTATCCGATGTTGGGACTGACAATGTGAACGAGCTCACACAGGCGGAGTTAGGCCTTGTTCACGCCTTGATTTTCATCTTTGATGATTGAATCAGTAGGTTTAATAGTGTATTAACTCTGCTGCTTGCAGTTCCCATTAGTTTCAAAGAGTGGATA-CATAAGGAAGTTGGTCTCGGAATCCAATGATGCTGACGTTTCTACGATCGAAATCCCTGATATACCTGGTGGAGGAGAGGCATTTGAATTTGCAGCAAAGTTTTGTTATGGAATAAATTTTGAGATAAGCACAAGAAACATTGCCTTGCTGAGATGTGCAGCAGAATATCTTGAGATGACAGAAGACTATGCAGTTGCAAATTTGGTGGGAAGAACTGAGGACTACTTTAGTGAAGTAGGAATTGAGAGCCTTCATAGTGCTGTTACAATTTTGCATTCATCAGAAAATCTTATTCCCATTTCAGAGAAAGTGAAATTGGTGAGCCGCTGCATTGACACAATTGCATATATAGCCTGTAAGGATAACCAATTCTCCACATCAGGTTGAGCAGAAGCTGGTATCTATGGATTGACTTCCTCCATGTTTTCGAACCCGAAGTCTATAGTTAACTGGTGGTCGGAGGATTTAACCGTCCTTAGAATTGATTTTTTCCAAAGGGTTCTGATTGCAATGATGGGAAGGGGATTCAAGCAGTATGCACTTGGACCAATATTAATGCTCTATGCACAGAAGTCTCTTCGTTGTTTGGTGAGGCCTTGTACTATAAAATCTTGATGAATTGGTTAAATTGAAATCTTTGTGCATATAGTAACTTTTTGTTTATAACAGGAAATATTTGGAAAGGGAAGGAAAAAGATTGAACCAAAACAAGAACATGAAAAAAGGGTTGTTGTAGAAACCATCGTTGGTCTTCTGCCAAGGGAGAAAAATGCATTATCCGTTAGCTTTTGTCAATGCTTCTCCGAGCTGCAATATATCTGCAGACCACGATGGCTGGCAGGCTCGACTTGGAGAAGAGGATGGATTGCAGCTTGGACAGGCTGTATTGGATGTATCTGTTAATTCCTTCATATTCCTTCAGAGGGGACACTTTGTTTGATGTTGAAATCATGCAGCTTATTGTGATGAATTTCCTTGCCTATGATATGGAGGAAAATCATTGGGAGATGAAGAGTATAATGAGTCTCATTCATTAAGAGACATGGAGCGAGTTGGGGAACTTATGGAAAATTACCTTGCTAAAATAGCTTCTGACCGTAATCTATCCATCACAAGCTTCATTAATCTTGCTG</genome_strand>
        <mrna_strand>TGAACTTACAGAAGCAAAGAAAATGGCAACAAACATGTCTTTCTATTGTTTGCTTCATTAGGAAATAGTTTAAGGGAAAACGAATGAACATGGTTAAGGCCCGTAAAAGACTCGATCACCCATGGTGGATGACATGTTGATCTTGATAATGAACAACCTTCTACTCTAAACAGTATGTCCACTAAAAAGGAGCTTCTTTTCTCTGCTACAAAGAGGACCTCTCAATG.......................................................................................................................GATTTTCTCCCAGGAGATCCCAAGTGATGTGACTGTAAATGCCGCAGGAATCTCCTTTACACTACACAAG...........................................................................................................................................................................................................................................................................................................................................................................................TTCCCATTAGTTTCAAAGAGTGGATACCATAAGGAAGTTGGTCTCGGAATCCAATGATGCTGACGTTTCTACGATCGAAATCCCTGATATACCTGGTGGAGGAGAGGCATTTGAATTTGCAGCAAAGTTTTGTTATGGAATAAATTTTGAGATAAGCACAAGAAACATTGCCTTGCTGAGATGTGCAGCAGAATATCTTGAGATGACAGAAGACTATGCAGTTGCAAATTTGGTGGGAAGAACTGAGGACTACTTTAGTGAAGTAGGAATTGAGAGCCTTCATAGTGCTGTTACAATTTTGCATTCATCAGAAAATCTTATTCCCATTTCAGAGAAAGTGAAATTGGTGAGCCGCTGCATTGACACAATTGCATATATAGCCTGTAAGGATAACCAATTCTCCACATCAGGTTGAGCAGAAGCTGGTATCTATGGATTGACTTCCTCCATGTTTTCGAACCCGAAGTCTATAGTTAACTGGTGGTCGGAGGATTTAACCGTCCTTAGAATTGATTTTTTCCAAAGGGTTCTGATTGCAATGATGGGAAGGGGATTCAAGCAGTATGCACTTGGACCAATATTAATGCTCTATGCACAGAAGTCTCTTCGTTGTTTG.................................................................................GAAATATTTGGAAAGGGAAGGAAAAAGATTGAACCAAAACAAGAACATGAAAAAAGGGTTGTTGTAGAAACCATCGTTGGTCTTCTGCCAAGGGAGAAAAATGCATTATCCGTTAGCTTTTGTCAATGCTTCTCCGAGCTGCAATATATCTGCAGACCACGATGGCTGGCAGGCTCGACTTGGAGAAGAGGATGGATTGCAGCTTGGACAGGCTGTATTGGATGTATCTGTTAATTCCTTCATATTCCTTCAGAGGGGACACTTTGTTTGATGTTGAAATCATGCAGCTTATTGCGATGAATTTCCTTGCCTATGATATGGAGGAAAATCATTGGGAGATGAAGAGTATAATGAGTCTCATTCATTAAGAGACATGGAGCGAGTTGGGGAACTTATGGAAAATTACCTTGCTAAAATAGCTTCTGACCGTAATCTATCCATCACAAGCTTCATTAATCTTGCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0053H21-RnoJv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U598021" ref_strand="+" ref_description="SGN-U598021 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>gcataggttttgctaattcaaccaagaaaatagtttaattatgtaggaaagatcttaatatgatgtgaaaatgacattcctggaggagcctattgacgtcctacaccagctattcattattgacaattgccgtagctatcatttgtcagacaaatttcagtggatatgctttcagtctgagactattacctagccaggtctagggtccaattaatccgtactagctttgaactaacattgcaaaacttgtcttcacccttctactggtggatttgggttatagggcaggtgcgatcacacctactttggatacaattgggaacaataacaattaaagtatcaagaaacgaaattcgatatcagctggtttgatatgtaccccgatggttttttgcagacaatgaagaccaaataaaactaggtaaatgccactataaacttacacaattcttaactggtaaataatttcaattt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0053H21-RnoJv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0053H21.1" temp_strand="-" temp_description="C02SLe0053H21.1  AC226516.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0053H21 sequenced_by:kribb upload_account_name:korea">
        <position start="78441" stop="77369"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="78142" g_stop="77669" g_length="474"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="474" r_length="474" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0053H21.1" gen_strand="-" ref_id="SGN-U598021" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>474</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0053H21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U598021" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="78142" e_stop="77669"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCATAGGTTTTGCTAATTCAACCAAGAAAATAGTTTAATTATGTAGGAAAGATCTTAATATGATGTGAAAATGACATTCCTGGAGGAGCCTATTGACGTCCTACACCAGCTATTCATTATTGACAATTGCCGTAGCTATCATTTGTCAGACAAATTTCAGTGGATATGCTTTCAGTCTGAGACTATTACCTAGCCAGGTCTAGGGTCCAATTAATCCGTACTAGCTTTGAACTAACATTGCAAAACTTGTCTTCACCCTTCTACTGGTGGATTTGGGTTATAGGGCAGGTGCGATCACACCTACTTTGGATACAATTGGGAACAATAACAATTAAAGTATCAAGAAACGAAATTCGATATCAGCTGGTTTGATATGTACCCCGATGGTTTTTTGCAGACAAGGAAGACCAAATAAAACTAGGTAAATGCCACTATAAACTTACACAATTCTTAACTGGTAAATAATTTCAATTT</genome_strand>
        <mrna_strand>GCATAGGTTTTGCTAATTCAACCAAGAAAATAGTTTAATTATGTAGGAAAGATCTTAATATGATGTGAAAATGACATTCCTGGAGGAGCCTATTGACGTCCTACACCAGCTATTCATTATTGACAATTGCCGTAGCTATCATTTGTCAGACAAATTTCAGTGGATATGCTTTCAGTCTGAGACTATTACCTAGCCAGGTCTAGGGTCCAATTAATCCGTACTAGCTTTGAACTAACATTGCAAAACTTGTCTTCACCCTTCTACTGGTGGATTTGGGTTATAGGGCAGGTGCGATCACACCTACTTTGGATACAATTGGGAACAATAACAATTAAAGTATCAAGAAACGAAATTCGATATCAGCTGGTTTGATATGTACCCCGATGGTTTTTTGCAGACAATGAAGACCAAATAAAACTAGGTAAATGCCACTATAAACTTACACAATTCTTAACTGGTAAATAATTTCAATTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0053H21-RnoJv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U600214" ref_strand="+" ref_description="SGN-U600214 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>ttagaagcgcttaacacttccggcggagatagtccgcatctagcataaaggagcccacgatgcagcttctgctatctttatagctggagaataagtgactcaggacttaagaatgtgtagatgacaggtcatcttatatattattgtgtatctatggtctctcgtgtctgaaggtaatgctttttgaattttttttgctggattttatcttatatggattccaacccagcaagaatctgaactggaactggtccaaaaattattcgtgtagtagtgggccttgttcatgcttctcttatatcactgtcaccatgggcactgcttatcgaatcttagttacaagaaaccttgtttttgatactcagctagtaaaaaatgcaaattgacactaaagttacattagttaaacactttgtaatcctttaacataaacttagatggggtaagtcttatcccaaacaaaaagagaatacacaaagaagatgtgcagctccttgcttaaattgttttctgtagttgctgtgctagtgtaacggagcgattcacgagctggagtttgtcagttgagtagaattttgtcttggtgtcattcattcactgggaagantattgtttagatggacttgtaaaaagtaacttataagtcaaaagctaaaagtcacaagtanatganaccctacttttgacttttggtttattttaaaactctttngnntaaagta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0053H21-RnoJv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0053H21.1" temp_strand="-" temp_description="C02SLe0053H21.1  AC226516.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0053H21 sequenced_by:kribb upload_account_name:korea">
        <position start="82472" stop="78385"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82172" g_stop="82137" g_length="36"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="36" r_length="36" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82136" i_stop="79362" i_length="2775">
            <donor d_prob="0.962" d_score="0.00"/>
            <acceptor a_prob="0.883" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="79361" g_stop="78674" g_length="688"/>
          <reference_exon_boundary r_type="cDNA" r_start="37" r_stop="722" r_length="686" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0053H21.1" gen_strand="-" ref_id="SGN-U600214" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>724</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0053H21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U600214" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82172" e_stop="82137"/>
          <exon e_start="79361" e_stop="78674"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTAGAAGCGCTTAACACTTCCGGCGGAGATAGTCCGGTAAGCCCTCGCTTTCATCTTATTTCCGTAAGTTTTCGAGTAGTTTCTCAAACTCGGGATTAACAGTGGCTTAAATCAGAATTTTTCACCATTAAATTATGAATAAGTTAACACCGGAAGAAGTATTGAAAAGGGGGTTTAAAGTTCGAACATGAATGGGATTCTGTAAGGTTCTAAACTGAGGGAAAGAAGGCCTTTCTTGATGTTGTTGTATGTTAGTATTGGTAGGTTTTTAAAGTACTTGACTCATAAGTTCCCTAAATTGGAGCGATGTTCTTAATACTATAATTGCTATTTGGGAAATTATTGGAGTATTTTGGTGTTCTTGTGAAAATAGGTTTACTGTTTTATTATATGTGTTCTGTTTTCTGTCTGCTTCTCCTTGCATGGCCGCCACTCTCCTACAGAAATTTGTTCCTAGTTGCATAGAATAATGTTCATGGCATTAAAACAAATTACTGACAGCTTAACCCTCCTTTCAGTCAACGCTTTCCCTAATAAAATCCACCCTTCCTCAAGTCTTTCGTTACCGTTTCCTTGCAGACAGTTTTTTTTTGCTCTTTGATCAGCAAAACATACAAGTGCTAAGTTAGTCTAGTAACTCCCCTATTCTTCAGTCACTCTATTCATGATCGGTGTTCTCTTACTTCTCCTACATCAAGCCCATAATACTGGAGGGGTGGTTTTTGTCGTGAACTAGAGTAATGCCAAAGAATTGATTACTTGCAACCACTTGTTCTTGACTCTTGTAAGCTGTAATCAATTTATCATACTCTTGACTCTTGTAAGCTATAATCAGTATATCACAATGCATGAGTAGGCCTGCTGAAGTGTCATATTTTAATTCTTAAGTGTTAAGCTGTTATCAGTGTAACTTTCTTATGGCCTAAAATTGCACATACAACAAGGTAACACAAAGAACAGTACTATCGGTAAAGCATAAACTTCTTCAACCCAGTTGTTTATCTGATGAACTTGCATATGCAATTTCTTGATGATGAACACTATGCATCCTATACTCCTATATTATGAGGTAAACAGACTTCCTTCATCCGAAAGAGATAACTCTTGCATATGAAATCCCCAAGCCCATATTTATAGTACATTCCAAATAACGGGTTTAGATTGCAATTGTATACAGTCAGATACTAGTGGTTAGTGAACATCAGACTTGTCAATGATCACCCTTGCTCTGGGATGGTCCTCGGTGGAGGAAGAGAGAGATAATCCTTGTGTGTGTGTGTGTGTGGGTGGGTGGGGGATTTTTTTGTGTGGATAATTTGGTGATTCAACCTAAGTGTCTTTGTACAAATAGAGATGTTGCAAGTAAGTGTGTTGTTGCAGGTACCTCTCAAGATGCAATTGTTGGTTCATTCTAGTCATTTTTAAGCTCCATTCTTCATTAATTCCATAGTTTTCGTGGTCAACTTTGATCCAAATTTTATGACTTCTTGAACTCTGGTATTTATTTCTTCACTCCAAAATACAGTGTAAAATCTTTAGTGGTGCATTCAGTAATTATCCATGGCCATACTCATTTCTGCAAATAATCCTGATTTCACAAAGGTGGAAGCTGAGATGGTAGATTGTGTCAAAATTCTTTAAAAGTGATCAGGTTAGTTGATATATGCCGGGAGATATAAGAAAAATGGCTGAAGGGGAGCCTTGGAGCAACATAAAATGTTGTCTTTGTGTGATCTATATGCAGGGAGGAGGTATAAGAAAAATGGCTGAAGGGGAGCTTTGGAGCGACATTAAAAGTTGTCTTTGTGTGATCTATCGGTCACAAGTTTGAGCCGTGGAAGTAGTCACTAATGCTTGAATTAGGGCAGGCTGTCTATATCAGATCCATGGGGTGTGACCCTTTTCCATCCCTGTGTGAACACGATATGCCTTGCGCACCGGCTGCTGTGTCATGTAAGAAAAATGATCGTCTATTTCTTTTAGCTGATTGTATTGAGCTATGATGGTAGACTCTGTCTCAGTTTCTTTGATATGATTTTCTATTCTTTGTCTAATGGTGGTGGGCTGGTGGTATTAGGACCAACTTTTGTGTGCATCAATTAATACCCTGGGCTTTGCTTCATTCAAAAAGCACAGTTGCCAGAACACAAAATCTGTCCACAAGGTTATAATAAATGAACACACATTGAGTGTTGTATCTGGGATTCATATTGGGATCTCCAGGTTGTTCTTCCTATACCTTGGCCACTCAGTAATCCCATGTTTTTGATTCAACATTCGTCCTCATAGAACTCATTTCCTGTAACTTCTTAGTTTTTGGTTTCTGGAGAACAGTTGAATGCTTAGCCCATTTTGCTTAGGGATCACATATCCACATTCCGCAGCAGCAACAATTCTTTACTGAACCTACTACTTCAATTAGGTGGGTATTTGTTTTTGTTTGTTGGTTTGTTGCCTGATGTTAGAGTTTGATGTTTTCGTTTTATTTTCTTCTACATTACAACGGGAGAACTTTCTGAATTATCGTAGTCATGGGTCGTTGTTTTAGTTGAAAGGTGGAATAGGATAGGAGTTAACTAATTGTTGAAGAAGTGAAAGAGGGGCAGGGAAGATCCAAGGCAACCAGCAAGACTGTTTAGTAGCTATTTTTTATTGTGTTTGCACGTGGGAAGTTATAGTTTTGCCCTTAAAAAAGCATAATTTACTATTTTCATTCTTGTGTAGGGAAGTAATATTCTTTATGATGCATATATTCTTCATGTTTCTTTGGCTAACTTAGGTAATTTTGTATGTTTGGACAAAATAAAGTAGCATCTAGCATAAAGGAGCCCACGATGCAGCTTCTGCTATCTTTATAGCTGGAGAATAAGTGACTCAGGACTTAAGAATGTGTAGATGACAGGTCATCTTATATATTATTGTGTATCTATGGTCTCTCGTGTCTGAAGGTAATGCTTTTTGAATTTTTTTTGCTGGATTTTATCTTATATGGATTCCAACCCAGCAAGAATCTGAACTGGAACTGGTCCAAAAATTATTCGTGTAGTAGTGGGCCTTGTTCATGCTTCTCTTATATCACTGTCACCATGGGCACTGCTTATCGAATCTTAGTTACAAGAAACCTTGTTTTTGATACTCAGCTAGTAAAAAATGCAAATTGACACTAAAGTTACATTAGTTAAACACTTTGTAATCCTTTAACATAAACTTAGATGGGGTAAGTCTTATCCCAAACAAAAAGAGAATACACAAAGAAGATGTGCAGCTCCTTGCTTAAATTGTTTTCTGTAGTTGCTGTGCTAGTGTAACGGAGCGATTCACGAGCTGGAGTTTGTCAGTTGAGTAGAATTTTGTCTTGGTGTCATTCATTCACTGGGAAGATTATTGTTTAGATGGACTTGTAAAAAGTAACTTATAAGTCAAAAGCTAAAAGTCACAAGTAGATGATACCCTACTTTTGACTTTTGGTTTATTTTAAAACTCTTTTGGCCTAAAAGTA</genome_strand>
        <mrna_strand>TTAGAAGCGCTTAACACTTCCGGCGGAGATAGTCCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCTAGCATAAAGGAGCCCACGATGCAGCTTCTGCTATCTTTATAGCTGGAGAATAAGTGACTCAGGACTTAAGAATGTGTAGATGACAGGTCATCTTATATATTATTGTGTATCTATGGTCTCTCGTGTCTGAAGGTAATGCTTTTTGAATTTTTTTTGCTGGATTTTATCTTATATGGATTCCAACCCAGCAAGAATCTGAACTGGAACTGGTCCAAAAATTATTCGTGTAGTAGTGGGCCTTGTTCATGCTTCTCTTATATCACTGTCACCATGGGCACTGCTTATCGAATCTTAGTTACAAGAAACCTTGTTTTTGATACTCAGCTAGTAAAAAATGCAAATTGACACTAAAGTTACATTAGTTAAACACTTTGTAATCCTTTAACATAAACTTAGATGGGGTAAGTCTTATCCCAAACAAAAAGAGAATACACAAAGAAGATGTGCAGCTCCTTGCTTAAATTGTTTTCTGTAGTTGCTGTGCTAGTGTAACGGAGCGATTCACGAGCTGGAGTTTGTCAGTTGAGTAGAATTTTGTCTTGGTGTCATTCATTCACTGGGAAGANTATTGTTTAGATGGACTTGTAAAAAGTAACTTATAAGTCAAAAGCTAAAAGTCACAAGTANATGANACCCTACTTTTGACTTTTGGTTTATTTTAAAACTC-TTTNGNNT-AAAGTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0053H21-RnoJv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U577609" ref_strand="+" ref_description="SGN-U577609 Tomato 200607#2 [50 ESTs aligned] (*GB) gi|44804336|emb|CAD26882.1| (e_value=3e-179) protein kinase CK2 alpha subunit [Nicotiana tabacum]; (*ATH) AT5G67380.1 (e_value=4e-176)  Symbol: None | casein kinase II alpha chain 1, identical to casein kinase II, alpha chain 1 (CK II) (Arabidopsis thaliana) SWISS-PROT:Q08467; contains protein kinase domain, Pfam:PF00069 | chr5:26898192-26900611 REVERSE | Aliases: K8K14.10, K8K14_10... ; (*SWP) sp|Q08467|CSK21_ARATH (e_value=4e-175) Casein kinase II subunit alpha-1 OS=Arabidopsis thaliana GN=CKA1; ">
      <seq>aagatatttgcctgtggagagtgaaaagggtcccaatagcagcatacaagagagagcaaaaagctttcccaatctatggctttttcctaaaaatggtgtgtgagtaaagtagtgttattgctctggcggttgcatcaaacagaagcggggcccaattccttcgttgcatctacccagcctgcgtcttctttgttgtcccttttccgaaatccgatacctttatcaataactcttcagtctctgatttccggataaaccatgtccaaagctcgagtatacaccgatatcaatgtgcttcgtcctagggaatattgggattacgaatcgctaactgttcaatggggtgatcaggatgactatgaggttgttcgaaaagttggaagaggaaaatacagtgaagtttttgaaggtataaatgttaacagcagggagaagtgcataatcaagatcctgaaacctgttaagaagaaaaagatcaaaagagagataaagatattgcaaaatctctgtggtggaccaaatattgtcaaactccttgatatcgtcagagatcagcattcaaaaactccaagcttgatttttgagtacgtgaacagcacagatttcaaggttttgtacccaacgctaacagactatgacatacggtactacatatatgagcttctcaaggcactagattattgccattcacagggaataatgcacagggatgtcaaacctcataacgttatgatagaccatgaactgcggaagcttcgcttgatagattggggtcttgccgaattttaccacccagggaaggaatataatgttcgtgtggcttcaagatacttcaagggccctgaacttctagttgacttgcaagactatgactattctttggacatgtggagccttggctgcatgtttgcaggaatgattttccgcaaggaacctttcttttatggccatgataatcaggatcagctcgtcaaaattgcaaaggtacttgggacagatgagttgaatgcgtacttgcacaagtatcaactagagcttgatcctcagctagaggctatggttgggagacacagtaggaagccgtggtccaaatttattaatgcagacaatcagcatctagtgtcaccggaggctatagattatcttgacaagcttctccgttacgatcatcagactagacttacggcaaaagaagcaatggcccatccatatttcgggcaagtgagggctgctgaaactagcagaatgaggacacagtagctttcttgtcttgctgttaatgggaagaaaaaaaactgtgtaatgtaccttgtgtatccatttaagtgacattcgtgagaactatgtggatttgaacttgagcagacatctgaattcaggaattacagatcttcatcattgaacatttcaagagaaatagtgttttttagatttcctgatcgtgaccttgattgcaaatggaagtgacttgctgggcgtcaaaagtcaccccacccccccttccccaaagatactatctccctagatgtgaacaaaagcagatttttgaaaattagttcactttgtatattagtgcactggatttttctgcattc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0053H21-RnoJv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0053H21.1" temp_strand="+" temp_description="C02SLe0053H21.1  AC226516.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0053H21 sequenced_by:kribb upload_account_name:korea">
        <position start="84756" stop="92174"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="85056" g_stop="85399" g_length="344"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="344" r_length="344" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="85400" i_stop="86575" i_length="1176">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="86576" g_stop="86705" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="345" r_stop="474" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="86706" i_stop="87264" i_length="559">
            <donor d_prob="0.975" d_score="1.00"/>
            <acceptor a_prob="0.273" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="87265" g_stop="87459" g_length="195"/>
          <reference_exon_boundary r_type="cDNA" r_start="475" r_stop="669" r_length="195" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="87460" i_stop="88939" i_length="1480">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="88940" g_stop="89097" g_length="158"/>
          <reference_exon_boundary r_type="cDNA" r_start="670" r_stop="827" r_length="158" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="89098" i_stop="89943" i_length="846">
            <donor d_prob="0.568" d_score="1.00"/>
            <acceptor a_prob="0.911" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="89944" g_stop="90034" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="828" r_stop="918" r_length="91" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="90035" i_stop="90220" i_length="186">
            <donor d_prob="0.930" d_score="1.00"/>
            <acceptor a_prob="0.941" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="90221" g_stop="90286" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="919" r_stop="984" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="90287" i_stop="90476" i_length="190">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="90477" g_stop="90559" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="985" r_stop="1067" r_length="83" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="90560" i_stop="90747" i_length="188">
            <donor d_prob="0.900" d_score="1.00"/>
            <acceptor a_prob="0.917" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="90748" g_stop="90811" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="1068" r_stop="1131" r_length="64" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="90812" i_stop="90946" i_length="135">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="90947" g_stop="91015" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="1132" r_stop="1200" r_length="69" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="91016" i_stop="91479" i_length="464">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.967" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="91480" g_stop="91874" g_length="395"/>
          <reference_exon_boundary r_type="cDNA" r_start="1201" r_stop="1595" r_length="395" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0053H21.1" gen_strand="+" ref_id="SGN-U577609" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>1595</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0053H21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U577609" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="85056" e_stop="85399"/>
          <exon e_start="86576" e_stop="86705"/>
          <exon e_start="87265" e_stop="87459"/>
          <exon e_start="88940" e_stop="89097"/>
          <exon e_start="89944" e_stop="90034"/>
          <exon e_start="90221" e_stop="90286"/>
          <exon e_start="90477" e_stop="90559"/>
          <exon e_start="90748" e_stop="90811"/>
          <exon e_start="90947" e_stop="91015"/>
          <exon e_start="91480" e_stop="91874"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGATATTTGCCTGTGGAGAGTGAAAAGGGTCCCAATAGCAGCATACAAGAGAGAGCAAAAAGCTTTCCCAATCTATGGCTTTTTCCTAAAAATGGTGTGTGAGTAAAGTAGTGTTATTGCTCTGGCGGTTGCATCAAACAGAAGCGGGGCCCAATTCCTTCGTTGCATCTACCCAGCCTGCGTCTTCTTTGTTGTCCCTTTTCCGAAATCCGATACCTTTATCAATAACTCTTCAGTCTCTGATTTCCGGATAAACCATGTCCAAAGCTCGAGTATACACCGATATCAATGTGCTTCGTCCTAGGGAATATTGGGATTACGAATCGCTAACTGTTCAATGGGGGTAAATATTTTCCCTTATTTAACCCTAATCGCTTTTGATTTTGTTTTTAGTTTTGGGGGTTTGTATACTGGATAATAGATTGAAATTCTTGAATTAGATGCTGTTTATTACCTTTTTTTAAAAAGATTGTTTGGTAAAATAATAACATCCACTTCTAGCATCCAAGAAAATAGTTTTTGCTTATGTTTCCTTGTTTTTTCCGTCTGAAGTAAAAAGTGGGTGTTGTAACATCCTCTTACAGCATCCAAGAACATAATTCTTGGGTATGTTTCCTTGTTTTTTTCGTCTGAAAGAAAAGTGGGTGTGTTGTAACATCCTCTTACAGCATCCAAGAACATAATTCTTGGTTATGTTTCCTTTTTTAAAGATAAGTGGAGGTTACATAGCATTGTAACATCCACTCCAGGGGTGGGTGAAACCTGAAAACAAATGTTGGGTTTCTTATTCCTATTTTTTGTCTAATAGATAATTGTGTGATCAGTGTTAGATGCTATTTTGGCGAATTCCTGCTATCTTGAATGGAATGACTTTCACATTGGAAAATACCTATTGGGTTAATGCAAAACTCCTGTCTAGTCTTGTTGAACTGAGTCTGTATTTTGTGGCTCCAGATTAGGTTGGGCTTCAAGTCTTTATATGTTTGTTACTTCTATATTAGCTTCCACATGATACAATGGAAGCTAAATAACAAATATAATATACCAATTAGTTGAGTTATATACCAATTTGTTGAGTTTAAGGATTGGTCCTGCTGGTGCACATTTGGACTGAAGTAAATGTTTGTGTAAGTCTTGTAATAAGAGTGAGATTTACAACCCGTTGTGTTAAAAGTTGAATTATTGAATACTTGAATGGAACAGCCCCGAAGTGGAGTGGATAATTATAGAGGCTTCATTTAGTTGACACCAGTTAGTTTATTTTTGTTATTGTATAGTTCTGCTGCATTTATCAAGATGAGAGCATTTTGTGTAACAAGAACTATATAAATGTCTTGCTAAAGTGGGAGAATATAGTTTGTTAATCTTGGTTCTAGAGTACCTTGACCCTTGGCTCAACGATTAGTTTTATCTTACACAAGTATTGGTTTCAGATATGATTCTATTTGACTTACTCAACTTTAATGCACCAGCTACATTGTATTATCCTCACTAGTGCATGTCATATTTATTATTGTAGTGATCAGGATGACTATGAGGTTGTTCGAAAAGTTGGAAGAGGAAAATACAGTGAAGTTTTTGAAGGTATAAATGTTAACAGCAGGGAGAAGTGCATAATCAAGATCCTGAAACCTGTTAAGAAGAAAAAGGTATGACGTTTTTTGGCTGAATTAAGATTTCATTTTTCTGCTTCAAAAGGAAAAAAAATGAAGAAGTTTGCAGGAAGAGTTCTTCTGTAATGCAATACTTATTTTTTGTCTGACTTAATATCTATGGATAATCTTCAACATTAATGGAAGAATCTGTATCTAACTCATATAAAGGGGCTTAGTATCTATTGAGAATCATCAACATCGACAGGCTTAATGGAAAAATCTGTATTTAACTCATGAAAAAGACTACTCTCAATTATCTATCCATGTGGTTGATAGGGTGTCAAAGAAATAAGTGAAGTTTCTTTTTTGGAACTTTGGAAAAAATTCAGTTATGTTGTACGAAATGCATAATGCCTAGGTTCATCTCTTGATGACATTTTTTGATCGTTTTGGTAGTGTTATGCATCCACTGTTCATACACCTTTTGTCCTCCTATCCTTTCTTTAACTTAATTTTTAAATTAACACTGTTTTAGTTTGTAATATTGTGCTTTATACGGAAAAAAAGAAAAGAATATACATGCTTTTGACTTGACATTAGCGGTATCGTGTAGATCAAAAGAGAGATAAAGATATTGCAAAATCTCTGTGGTGGACCAAATATTGTCAAACTCCTTGATATCGTCAGAGATCAGCATTCAAAAACTCCAAGCTTGATTTTTGAGTACGTGAACAGCACAGATTTCAAGGTTTTGTACCCAACGCTAACAGACTATGACATACGGTACTACATATATGAGCTTCTCAAGGTAAGATGATAAACACATCAGATGGCAGTCAATATGGCTTTTATGTATTCATGCTCCCTCTCCCCTGATTCTTTTTTTTTTTTTTAAGGAAGGTAACAGTTATATACTTCCTGTCCTCTTGGTCCTCCTTTTCTGTATCTTCTTTCTTCTCTCAGAACCAAGAATAGAGTTGTACTGATGTCTTAACTTACTATCTGGTCAAAACTTTGTTTGTCTCCAACATTTCCTTCTATTGCAGCTTTTCAAGGTTTGTATGAGTATGAGAATTTTGGGAGTCCCCAGTTTTCTTATGCTCAGCAACTATTTCTGAATTGAGTGGATATATTCTCATATACTATGATCAAATTATGAGATCAAACTATCAAAGTTATAACTCCTAGGCTCATCTCAAGTGGAAATTTTGGAATCCAAGATTCTGGTGCCATAAAACTGCACTAATTTGGATTCATCTTATATCTATATTTAGATAATTGGGAGTCTGTCGAATGTGTCTCGTGATCTTGGGTTAGTGGGAATGACTAAGACTGTAAACTCATATTTGTTCACCTTATCCTGCCTGCCAATACATGGATTTCAAATCCATCATCAAAAATGTAGATTTTTCTTATTGATATTGTCAGCTCATTCACTGTCTTGGTCATTCCAATTGATTACCTTTCCTCTGCAATTCGGTCTAAGTATAGCTTCTGAATGTGTTTTTTACAAGGTAAATGACCTCATAGTGAGGTGCTTACCATGTCTCTTGTTATCAGATGATATGAATTAGATTCACTGCATGCCTATTGGAAGTTGATTTTATATCTAGATTAATGGCTATGCTCGTTGTTACTCTTAACAATGTGACATTTTTTTTCTGACTTTGGATTTCTTAAGTAACTCTCTTGTATTCTTCTGATCTTATAATTGGTTAAGGAAAAAAAATTCACCAATGCCATGGATATTCTCTCCTCTGTTTGCTAATTGCTATTTAAATTTCATTTTCCTTTTTCACGAGTAATATTATATTCCCTTTTTGTCTGATTTGCGTGAGAGTAACTATTTGGAAATGGGGATGCTAATTATTGGATCCTGTTGATTTCTATCTCGAAGTTAGTTCTTCCTTTTTGCTACATGCCTACATCACCAGCCTACCTGATCATATGTCTAGGTTTCCTTTCTTTTGCCTCCTCCTGCGAAAAAAAGAAAAGAAATTTAACTTCTCAAGCTTTCTCATTGTGTATCAGCATAATTGTTTGTCAAATGCTAGATCTGTTCCTGCATACTTACTTTCCATTCGCTTAATTTACTCTATTAATTTCCCCTTCTTTTTTGAAAGAAAAGAAAGAATCACGTTTTTGGCATGACTGCTGAATTTGCTGAGGCCTTCATTTCTTGTGACAGTTGTTTAATAGACTCTTTGGGACCTATTCTTTGTGTACATTTCTTGACATGCTTACCAATTTATGGAGGTCGAAAACTGAAACTTCTTATCAACCTGCAGGCACTAGATTATTGCCATTCACAGGGAATAATGCACAGGGATGTCAAACCTCATAACGTTATGATAGACCATGAACTGCGGAAGCTTCGCTTGATAGATTGGGGTCTTGCCGAATTTTACCACCCAGGGAAGGAATATAATGTTCGTGTGGCTTCAAGGTGAGATAATCTGCCGACAGTATGGCTGGACCGGCATAGTTGCTTTGCCAGCAACAACTTCCTACATATAGCATTGCTATTTGTAGATCCATGCTCTACTTGCAAATTATTCTCTGGACAAGTCATGAGTTTTTAATCAGAAAGCAAGTGACATTGTTATATATTTTTTAAGTCAGAAATAATAAAAGGAACATCATTCACTTACATATACAACAACTACCCGTCAGTTCCAAACTAGTCGGGGTCGTTATATGATTTTTGCTGTCCATGTTACTCCATTTAATCCCATATCTTGCGGACTTGTAAAGTTTAGAATCTCTATATTTTCTTAACTGACAAACTTCTGAAAAGCTAAAACACTCCTAGAAAGTATAGGACCTACAGGAAAATTCTAATATATTAATATATTCTCGACTAATATGTAGCATATATATAGAATTTTTTCTTCCATTGTGCCTTTCGTAAGTTCACATGGATCCTTAAAATTATAGGTCCTTAAAGACAACTTCCTTCCATGTGATTTTAGGTCTACTTCGTTTTTTAACAGCTCCACTCACCATAGTTTCACACTCAGGAGTCAGTGCATCAGGAGGGGTTAATGCAAGACATAATCAAATCATCTCAAGGAACAGCTGAGTTCTTAAAGAATACTTAAAACAATACCCATTAAAGAATACTTAAAACAATCAATGGGATTATAGGAAAAGGTTAGGAATTGTTTATGTAAAACTAATTCTGTATCAGCATAGCTGCATATGGGAAATTGGTTTTGTACCGTAAGTTAGTGGTTCATAAACTATCAATGCTATTGAAGCAAGTCTGAGTTCTTCTTTTCTTGCACTTCAGATACTTCAAGGGCCCTGAACTTCTAGTTGACTTGCAAGACTATGACTATTCTTTGGACATGTGGAGCCTTGGCTGCATGTTTGCAGGAATGGTGAGAAATTCTATGATTCATAATATAAGCTGTCAGTTGGTTTATAGTTTTATGCTATCAGTTGTGGGCCTGGGAAACTACAAACATCCGAAAGGACTTGTTAGAAGTTTGTATTTTGCTTATTTGAAATCAATTTTCCTTTTCCTCCTGTTTTCTTTGTGTCTGACCATACCTTTTCCTTGGTAGATTTTCCGCAAGGAACCTTTCTTTTATGGCCATGATAATCAGGATCAGCTCGTCAAAATTGCAAAGGTAATGCGTAGTAACTGACCAGTGACCAATGGGTTTATATACCTTAATTTTGTTGTTTGAGTGAGAGGGGGGAAGTTGATCATCTGAAAACAACCAAAGAAGTTGTTACTTCAGTTGCAAGTGAACACTCAATTTATAGAAGTAAAGCATAACTGCTTGACATGGAGTTGATAGATTATTGTTGTTATAGGTACTTGGGACAGATGAGTTGAATGCGTACTTGCACAAGTATCAACTAGAGCTTGATCCTCAGCTAGAGGCTATGGTTGGGAGGTATGCTTCTTGCTTTATCGCCAAGATAAAACTACGCTAAGGCAATTTGCAAAATAACTTAGAGCTGTGACTAAATAGGGTTACCAAGTTGATCTTAGCAACTAGCTTTAGCAGATGTGTGTCCTCTCTCATTAATTGCCAAAATTCTTAGCTATTGAAGGTGAATACAATCTGTCTTTCCCCTGCAGACACAGTAGGAAGCCGTGGTCCAAATTTATTAATGCAGACAATCAGCATCTAGTGTCACCGGAGGTACTCTTCTCTCTCTATTTATGTATCTATGGTATTTCTGAATAAGACGAAACCAGCAATGGTGACAAGTACATCTCAACCAATTGGCTGTTCTTCACTACCCACTTGATAATTGATTTTGGCTTCTCATTGCAGGCTATAGATTATCTTGACAAGCTTCTCCGTTACGATCATCAGACTAGACTTACGGCAAAAGAAGCAATGGTAATCCTCTTTATCCACTATTAATGAGCTTTAAACTCTGAGCCTCATCATTTTCTTCTCAGCTTCTGTCTTATATTGGTTTACTATTGCTTATTAAAGAAAATGGTTTCGTGACATTTTAAAACACATACTTTACCAAAACCAAAATGTAAGGTTATAAATAAATGAGATCAGTGAGGATGAGTGGGTGAAGAGACGCAACTTGACTAGTTTTTTGTTTTGAAATTCTGTTAGAAACAAGCTGGTGATTGTGAAGTGTCAGTGCTTTCTGTTTCTGCTCTTGGCTATGTTTTTTTCCTTTGTCATGATGTTGCATCTGCATCTTTCCTGGAATCAATCCACTCTCCCTTCTCAATTATTTCTTTTAACAACACTATACATGTATTTGTTTTGTTTTGCACAACTAGAGTATTGAACAGTGTGTTGGGAAACCTACTAACTGCTTTCTCTGCCCTGTTTCTTAGGCCCATCCATATTTCGGGCAAGTGAGGGCTGCTGAAACTAGCAGAATGAGGACACAGTAGCTTTCTTGTCTTGCTGTTAATGGGAAGAAAAAAAACTGTGTAATGTACCTTGTGTATCCATTTAAGTGACATTCGTGAGAACTATGTGGATTTGAACTTGAGCAGACATCTGAATTCAGGAATTACAGATCTTCATCATTGAACATTTCAAGAGAAATAGTGTTTTTTAGATTTCCTGATCGTGACCTTGATTGCAAATGGAAGTGACTTGCTGGGCGTCAAAAGTCACCCCACCCCCCCTTCCCCAAAGATACTATCTCCCTAGATGTGAACAAAAGCAGATTTTTGAAAATTAGTTCACTTTGTATATTAGTGCACTGGATTTTTCTGCATTC</genome_strand>
        <mrna_strand>AAGATATTTGCCTGTGGAGAGTGAAAAGGGTCCCAATAGCAGCATACAAGAGAGAGCAAAAAGCTTTCCCAATCTATGGCTTTTTCCTAAAAATGGTGTGTGAGTAAAGTAGTGTTATTGCTCTGGCGGTTGCATCAAACAGAAGCGGGGCCCAATTCCTTCGTTGCATCTACCCAGCCTGCGTCTTCTTTGTTGTCCCTTTTCCGAAATCCGATACCTTTATCAATAACTCTTCAGTCTCTGATTTCCGGATAAACCATGTCCAAAGCTCGAGTATACACCGATATCAATGTGCTTCGTCCTAGGGAATATTGGGATTACGAATCGCTAACTGTTCAATGGGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATCAGGATGACTATGAGGTTGTTCGAAAAGTTGGAAGAGGAAAATACAGTGAAGTTTTTGAAGGTATAAATGTTAACAGCAGGGAGAAGTGCATAATCAAGATCCTGAAACCTGTTAAGAAGAAAAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAAAAGAGAGATAAAGATATTGCAAAATCTCTGTGGTGGACCAAATATTGTCAAACTCCTTGATATCGTCAGAGATCAGCATTCAAAAACTCCAAGCTTGATTTTTGAGTACGTGAACAGCACAGATTTCAAGGTTTTGTACCCAACGCTAACAGACTATGACATACGGTACTACATATATGAGCTTCTCAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACTAGATTATTGCCATTCACAGGGAATAATGCACAGGGATGTCAAACCTCATAACGTTATGATAGACCATGAACTGCGGAAGCTTCGCTTGATAGATTGGGGTCTTGCCGAATTTTACCACCCAGGGAAGGAATATAATGTTCGTGTGGCTTCAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTTCAAGGGCCCTGAACTTCTAGTTGACTTGCAAGACTATGACTATTCTTTGGACATGTGGAGCCTTGGCTGCATGTTTGCAGGAATG..........................................................................................................................................................................................ATTTTCCGCAAGGAACCTTTCTTTTATGGCCATGATAATCAGGATCAGCTCGTCAAAATTGCAAAG..............................................................................................................................................................................................GTACTTGGGACAGATGAGTTGAATGCGTACTTGCACAAGTATCAACTAGAGCTTGATCCTCAGCTAGAGGCTATGGTTGGGAG............................................................................................................................................................................................ACACAGTAGGAAGCCGTGGTCCAAATTTATTAATGCAGACAATCAGCATCTAGTGTCACCGGAG.......................................................................................................................................GCTATAGATTATCTTGACAAGCTTCTCCGTTACGATCATCAGACTAGACTTACGGCAAAAGAAGCAATG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCATCCATATTTCGGGCAAGTGAGGGCTGCTGAAACTAGCAGAATGAGGACACAGTAGCTTTCTTGTCTTGCTGTTAATGGGAAGAAAAAAAACTGTGTAATGTACCTTGTGTATCCATTTAAGTGACATTCGTGAGAACTATGTGGATTTGAACTTGAGCAGACATCTGAATTCAGGAATTACAGATCTTCATCATTGAACATTTCAAGAGAAATAGTGTTTTTTAGATTTCCTGATCGTGACCTTGATTGCAAATGGAAGTGACTTGCTGGGCGTCAAAAGTCACCCCACCCCCCCTTCCCCAAAGATACTATCTCCCTAGATGTGAACAAAAGCAGATTTTTGAAAATTAGTTCACTTTGTATATTAGTGCACTGGATTTTTCTGCATTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0053H21-RnoJv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U590772" ref_strand="+" ref_description="SGN-U590772 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|64976597|dbj|BAD98469.1| (e_value=3e-34) casein protein kinase 2 alpha subunit [Lolium perenne]; (*ATH) AT5G67380.1 (e_value=6e-34)  Symbol: None | casein kinase II alpha chain 1, identical to casein kinase II, alpha chain 1 (CK II) (Arabidopsis thaliana) SWISS-PROT:Q08467; contains protein kinase domain, Pfam:PF00069 | chr5:26898192-26900611 REVERSE | Aliases: K8K14.10, K8K14_10... ; (*SWP) sp|P28523|CSK2A_MAIZE (e_value=1e-33) Casein kinase II subunit alpha OS=Zea mays GN=ACK2; ">
      <seq>ccaatagcagcatacaagagagagcaaaaagctttcccaatctatggctttttcctaaaaatggtgtgtgagtaaagtagtgttattgctctggcggttgcatcaaacagaagcggggcccaattccttcgttgcatctacccagcctgcgtcttctttgttgtcccttttccgaaatccgatacctttatcaataactcttcagcctctgatttccggataaaccatgtccaaagctcgagtatacaccgatatcaatgtgcttcgtcctagggaatattgggattacgaatcgctaactgttcaatggggtgatcacgatgactatgacgctgttccaaaagctggaagaggaaaatacagcgaagtttttgaaggtataaatgttaacagcagggagaagtgcatacccccccaccccccccccctgttatgaataaaaagatcaaaagagagataaagacattgcaaaatctctgcggtggaccaaatattgtcaaactccttgatat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0053H21-RnoJv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0053H21.1" temp_strand="+" temp_description="C02SLe0053H21.1  AC226516.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0053H21 sequenced_by:kribb upload_account_name:korea">
        <position start="84788" stop="87632"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="85088" g_stop="85399" g_length="312"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="312" r_length="312" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="85400" i_stop="86575" i_length="1176">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="86576" g_stop="86705" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="313" r_stop="444" r_length="132" r_score="0.823"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="86706" i_stop="87264" i_length="559">
            <donor d_prob="0.975" d_score="0.65"/>
            <acceptor a_prob="0.273" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="87265" g_stop="87332" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="445" r_stop="512" r_length="68" r_score="0.971"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0053H21.1" gen_strand="+" ref_id="SGN-U590772" ref_strand="+">
        <total_alignment_score>0.949</total_alignment_score>
        <cumulative_length_of_scored_exons>510</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0053H21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U590772" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="85088" e_stop="85399"/>
          <exon e_start="86576" e_stop="86705"/>
          <exon e_start="87265" e_stop="87332"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCAATAGCAGCATACAAGAGAGAGCAAAAAGCTTTCCCAATCTATGGCTTTTTCCTAAAAATGGTGTGTGAGTAAAGTAGTGTTATTGCTCTGGCGGTTGCATCAAACAGAAGCGGGGCCCAATTCCTTCGTTGCATCTACCCAGCCTGCGTCTTCTTTGTTGTCCCTTTTCCGAAATCCGATACCTTTATCAATAACTCTTCAGTCTCTGATTTCCGGATAAACCATGTCCAAAGCTCGAGTATACACCGATATCAATGTGCTTCGTCCTAGGGAATATTGGGATTACGAATCGCTAACTGTTCAATGGGGGTAAATATTTTCCCTTATTTAACCCTAATCGCTTTTGATTTTGTTTTTAGTTTTGGGGGTTTGTATACTGGATAATAGATTGAAATTCTTGAATTAGATGCTGTTTATTACCTTTTTTTAAAAAGATTGTTTGGTAAAATAATAACATCCACTTCTAGCATCCAAGAAAATAGTTTTTGCTTATGTTTCCTTGTTTTTTCCGTCTGAAGTAAAAAGTGGGTGTTGTAACATCCTCTTACAGCATCCAAGAACATAATTCTTGGGTATGTTTCCTTGTTTTTTTCGTCTGAAAGAAAAGTGGGTGTGTTGTAACATCCTCTTACAGCATCCAAGAACATAATTCTTGGTTATGTTTCCTTTTTTAAAGATAAGTGGAGGTTACATAGCATTGTAACATCCACTCCAGGGGTGGGTGAAACCTGAAAACAAATGTTGGGTTTCTTATTCCTATTTTTTGTCTAATAGATAATTGTGTGATCAGTGTTAGATGCTATTTTGGCGAATTCCTGCTATCTTGAATGGAATGACTTTCACATTGGAAAATACCTATTGGGTTAATGCAAAACTCCTGTCTAGTCTTGTTGAACTGAGTCTGTATTTTGTGGCTCCAGATTAGGTTGGGCTTCAAGTCTTTATATGTTTGTTACTTCTATATTAGCTTCCACATGATACAATGGAAGCTAAATAACAAATATAATATACCAATTAGTTGAGTTATATACCAATTTGTTGAGTTTAAGGATTGGTCCTGCTGGTGCACATTTGGACTGAAGTAAATGTTTGTGTAAGTCTTGTAATAAGAGTGAGATTTACAACCCGTTGTGTTAAAAGTTGAATTATTGAATACTTGAATGGAACAGCCCCGAAGTGGAGTGGATAATTATAGAGGCTTCATTTAGTTGACACCAGTTAGTTTATTTTTGTTATTGTATAGTTCTGCTGCATTTATCAAGATGAGAGCATTTTGTGTAACAAGAACTATATAAATGTCTTGCTAAAGTGGGAGAATATAGTTTGTTAATCTTGGTTCTAGAGTACCTTGACCCTTGGCTCAACGATTAGTTTTATCTTACACAAGTATTGGTTTCAGATATGATTCTATTTGACTTACTCAACTTTAATGCACCAGCTACATTGTATTATCCTCACTAGTGCATGTCATATTTATTATTGTAGTGATCAGGATGACTATGAGGTTGTTCGAAAAGTTGGAAGAGGAAAATACAGTGAAGTTTTTGAAGGTATAAATGTTAACAGCAGGGAGAAGTGCATA-ATCAAGA-TCCTGAAACCTGTTAAGAAGAAAAAGGTATGACGTTTTTTGGCTGAATTAAGATTTCATTTTTCTGCTTCAAAAGGAAAAAAAATGAAGAAGTTTGCAGGAAGAGTTCTTCTGTAATGCAATACTTATTTTTTGTCTGACTTAATATCTATGGATAATCTTCAACATTAATGGAAGAATCTGTATCTAACTCATATAAAGGGGCTTAGTATCTATTGAGAATCATCAACATCGACAGGCTTAATGGAAAAATCTGTATTTAACTCATGAAAAAGACTACTCTCAATTATCTATCCATGTGGTTGATAGGGTGTCAAAGAAATAAGTGAAGTTTCTTTTTTGGAACTTTGGAAAAAATTCAGTTATGTTGTACGAAATGCATAATGCCTAGGTTCATCTCTTGATGACATTTTTTGATCGTTTTGGTAGTGTTATGCATCCACTGTTCATACACCTTTTGTCCTCCTATCCTTTCTTTAACTTAATTTTTAAATTAACACTGTTTTAGTTTGTAATATTGTGCTTTATACGGAAAAAAAGAAAAGAATATACATGCTTTTGACTTGACATTAGCGGTATCGTGTAGATCAAAAGAGAGATAAAGATATTGCAAAATCTCTGTGGTGGACCAAATATTGTCAAACTCCTTGATAT</genome_strand>
        <mrna_strand>CCAATAGCAGCATACAAGAGAGAGCAAAAAGCTTTCCCAATCTATGGCTTTTTCCTAAAAATGGTGTGTGAGTAAAGTAGTGTTATTGCTCTGGCGGTTGCATCAAACAGAAGCGGGGCCCAATTCCTTCGTTGCATCTACCCAGCCTGCGTCTTCTTTGTTGTCCCTTTTCCGAAATCCGATACCTTTATCAATAACTCTTCAGCCTCTGATTTCCGGATAAACCATGTCCAAAGCTCGAGTATACACCGATATCAATGTGCTTCGTCCTAGGGAATATTGGGATTACGAATCGCTAACTGTTCAATGGGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATCACGATGACTATGACGCTGTTCCAAAAGCTGGAAGAGGAAAATACAGCGAAGTTTTTGAAGGTATAAATGTTAACAGCAGGGAGAAGTGCATACCCCCCCACCCCCCCCCCCTGTTATGAATAAAAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAAAAGAGAGATAAAGACATTGCAAAATCTCTGCGGTGGACCAAATATTGTCAAACTCCTTGATAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0053H21-RnoJv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U591619" ref_strand="+" ref_description="SGN-U591619 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|194466179|gb|ACF74320.1| (e_value=2e-32) unknown; (*ATH) AT2G23090.1 (e_value=3e-30) | Symbol: None | expressed protein | chr2:9836530-9837490 REVERSE | Aliases: F21P24.15; (*SWP) sp|O64818|Y2309_ARATH (e_value=2e-29) Uncharacterized protein At2g23090 OS=Arabidopsis thaliana GN=At2g23090; ">
      <seq>gtactcgaagagctctctagggtttcaattcacctccgtttcagcagtaatgggtggaggcaacggtcagaaagccaagatggctcgtgagaagaacatatagaagatgaaaggcgcaaaagaaagccaacttgacgcgaacaagaaggccatgaatatccagtgcaaggtgtgcatgcagacatttatgtgcacaacgtcagaggtgaagtgcaaggaacatgccgaggccaaacatccaaaatctgacctcgtcacctgtttccctcatctcaaaatataaacttaggtgtcgaacatgtcttgtagataatgttagtattacctcctatcactaatcacaaagtgtcgatccaagcaagatgtaaaattgtgtatttgtcccgcacataaataggtcgggccaaatctttagttgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0053H21-RnoJv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0053H21.1" temp_strand="-" temp_description="C02SLe0053H21.1  AC226516.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0053H21 sequenced_by:kribb upload_account_name:korea">
        <position start="93909" stop="91879"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="93615" g_stop="93494" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="122" r_length="122" r_score="0.975"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="93493" i_stop="93274" i_length="220">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="93273" g_stop="93233" g_length="41"/>
          <reference_exon_boundary r_type="cDNA" r_start="123" r_stop="163" r_length="41" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="93232" i_stop="92435" i_length="798">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="92434" g_stop="92179" g_length="256"/>
          <reference_exon_boundary r_type="cDNA" r_start="164" r_stop="419" r_length="256" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0053H21.1" gen_strand="-" ref_id="SGN-U591619" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>419</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0053H21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U591619" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="93615" e_stop="93494"/>
          <exon e_start="93273" e_stop="93233"/>
          <exon e_start="92434" e_stop="92179"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTAACAGAAGAGCTCTCTAGGGTTTCAATTCACCTCCGTTTCAGCAGTAATGGGTGGAGGCAACGGTCAGAAAGCCAAGATGGCTCGTGAGAAGAACATATAGAAGATGAAAGGCGCAAAAGGTATTTTGTTTCTAATGATCTGAACCCAATTTCATCCACATCATGCTCTTAATTCAATGGTCAATTAGCCTTAATATCAGCCGATTCGATCTCGTTGTTGGAATTCGACGTGGCTGAGAGTGCCTTAATCGCTCTTTTTGTTTGTTTAGATGCTGAGATATGATTTTACGTTAATCGTCAATCTTTTGGCTTTTTACTAACTCTCAAAATCTATATGCAGAAAGCCAACTTGACGCGAACAAGAAGGCCATGAATATCCAGGTAAAGCCTTTTTATTGTGCAATTTTGGTATGTAAATTGTAATGGGTAATTACTGAATCCCAATATTTGTTGGATTCATCTAGAGAAATTGATTATGGATAGCTGAAATTGATTAGTCCAGTAGTAACAAGAAGAGGGGCATTATATGTTGAAGGTGAGAACCGATCAATCACTCCAATAAATCAATAACCTGGATATCCTTACCATCTATAATCTTTTGTTATTATTTTTCGGGCTGGTAACTTCATGGTGTTGAACTTCATCTTCGTATGAGTTCATATTTCATAATGACAACCCAATAATGGCAACTCTCAATCATGTGTTCCACTGTGTAGTCTCCTTTAAATGTTCTGTAATTTGGCTCATGTAGCATGTGAATTGTTTAGTCACTCTTCTTACATAGATACTGGCTATGTGGTTCAGTACTCCTATCTTTCTCCTTGTACTTTGAAAATCTGAATTTAGGCAATTCGATTGTTTTTTATGTCTTATTAGATTGTCTTTTGTCTTTCTTTTCCAGCCTTCTACGATATTTCTGTGATGTTGTATAACTTCTGCCAAAAAAAATTTTCTTAGGCTTTCAATAGGAGATAGCCTAAGTAAAGAGTCGCATTCAAGTCTGAACAATAATCTTTATGGCTCTGCTTATCAGTGTCTACACAGATTTTCTTACCGGGTGAACTATTTTTATGTCTTCTTTCAGCCTCTGATAATTCATTAGTGTCTTTAGAGTTCATCTTGATTGATGTTTGTTTTGATCCTTCACTAACTTGTATTTATTGTTGCGGATGATGGCAGTGCAAGGTGTGCATGCAGACATTTATGTGCACAACGTCAGAGGTGAAGTGCAAGGAACATGCCGAGGCCAAACATCCAAAATCTGACCTCGCCACCTGTTTCCCTCATCTCAAAATATAAACTTAGGTGTCGAACATGTCTTGTAGATAATGTTAGTATTACCTCCTATCACTAATCACAAAGTGTCGATCCAAGCAAGATGTAAAATTGTGTATTTGTCCCGCACATAAATAGGTCGGGCCAAATCTTTAGTTGT</genome_strand>
        <mrna_strand>GTACTCGAAGAGCTCTCTAGGGTTTCAATTCACCTCCGTTTCAGCAGTAATGGGTGGAGGCAACGGTCAGAAAGCCAAGATGGCTCGTGAGAAGAACATATAGAAGATGAAAGGCGCAAAAG............................................................................................................................................................................................................................AAAGCCAACTTGACGCGAACAAGAAGGCCATGAATATCCAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAAGGTGTGCATGCAGACATTTATGTGCACAACGTCAGAGGTGAAGTGCAAGGAACATGCCGAGGCCAAACATCCAAAATCTGACCTCGTCACCTGTTTCCCTCATCTCAAAATATAAACTTAGGTGTCGAACATGTCTTGTAGATAATGTTAGTATTACCTCCTATCACTAATCACAAAGTGTCGATCCAAGCAAGATGTAAAATTGTGTATTTGTCCCGCACATAAATAGGTCGGGCCAAATCTTTAGTTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0053H21-RnoJv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U603210" ref_strand="+" ref_description="SGN-U603210 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>ttcatcttcgtatgagttcatatttcataatgacaacccaataatggcaactctcaatcatgtgttccactgtgtagtctcctttaaatgttctgtaatttggctcatgtagcatgtgaattgtttagtcactcttcttacatagatactggctatgtggttcagtactcctatctttctccttgtactttgaaaatctgaatttaggcaattcgattgttttttatgtcttattagattgtcttttgtctttcttttccagccttctacgatatttctgtgatgttgtataacttctgccaaaaaaaattttcttaggctttcaataggagatagcctaagtaaagagtcgcattcaagtctgaacaataatctttatggctctgcttatcagtgtctacacagattttcttaccgggtgaactatttttatgtcttctttcagcctctgataattcattagtgtctttagagttcatcttgattgatgtttgttttgatccttcactaacttgtatttattgttgcggatgatggcagtgcaaggtgtgcat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0053H21-RnoJv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0053H21.1" temp_strand="-" temp_description="C02SLe0053H21.1  AC226516.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0053H21 sequenced_by:kribb upload_account_name:korea">
        <position start="93274" stop="92121"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="92974" g_stop="92421" g_length="554"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="554" r_length="554" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0053H21.1" gen_strand="-" ref_id="SGN-U603210" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>554</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0053H21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U603210" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="92974" e_stop="92421"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCATCTTCGTATGAGTTCATATTTCATAATGACAACCCAATAATGGCAACTCTCAATCATGTGTTCCACTGTGTAGTCTCCTTTAAATGTTCTGTAATTTGGCTCATGTAGCATGTGAATTGTTTAGTCACTCTTCTTACATAGATACTGGCTATGTGGTTCAGTACTCCTATCTTTCTCCTTGTACTTTGAAAATCTGAATTTAGGCAATTCGATTGTTTTTTATGTCTTATTAGATTGTCTTTTGTCTTTCTTTTCCAGCCTTCTACGATATTTCTGTGATGTTGTATAACTTCTGCCAAAAAAAATTTTCTTAGGCTTTCAATAGGAGATAGCCTAAGTAAAGAGTCGCATTCAAGTCTGAACAATAATCTTTATGGCTCTGCTTATCAGTGTCTACACAGATTTTCTTACCGGGTGAACTATTTTTATGTCTTCTTTCAGCCTCTGATAATTCATTAGTGTCTTTAGAGTTCATCTTGATTGATGTTTGTTTTGATCCTTCACTAACTTGTATTTATTGTTGCGGATGATGGCAGTGCAAGGTGTGCAT</genome_strand>
        <mrna_strand>TTCATCTTCGTATGAGTTCATATTTCATAATGACAACCCAATAATGGCAACTCTCAATCATGTGTTCCACTGTGTAGTCTCCTTTAAATGTTCTGTAATTTGGCTCATGTAGCATGTGAATTGTTTAGTCACTCTTCTTACATAGATACTGGCTATGTGGTTCAGTACTCCTATCTTTCTCCTTGTACTTTGAAAATCTGAATTTAGGCAATTCGATTGTTTTTTATGTCTTATTAGATTGTCTTTTGTCTTTCTTTTCCAGCCTTCTACGATATTTCTGTGATGTTGTATAACTTCTGCCAAAAAAAATTTTCTTAGGCTTTCAATAGGAGATAGCCTAAGTAAAGAGTCGCATTCAAGTCTGAACAATAATCTTTATGGCTCTGCTTATCAGTGTCTACACAGATTTTCTTACCGGGTGAACTATTTTTATGTCTTCTTTCAGCCTCTGATAATTCATTAGTGTCTTTAGAGTTCATCTTGATTGATGTTTGTTTTGATCCTTCACTAACTTGTATTTATTGTTGCGGATGATGGCAGTGCAAGGTGTGCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0053H21-RnoJv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U579715" ref_strand="+" ref_description="SGN-U579715 Tomato 200607#2 [7 ESTs aligned] (*GB) gi|157345249|emb|CAO71977.1| (e_value=4e-117) unnamed; (*ATH) AT2G23093.1 (e_value=6e-111) | Symbol: None | expressed protein | chr2:9839203-9841819 FORWARD | Aliases: None; (*SWP) sp|Q6N075|MFSD5_HUMAN (e_value=8e-11) Major facilitator superfamily domain-containing protein 5 OS=Homo sapiens GN=MFSD5; ">
      <seq>attatgaaatatgaactcatacgaagatgaagttcaacaccatgaagttaccagcccgaaaaataataacaaaagattatagatggtaaggatatccaggttattgatttattggagtgattgatcggttctcaccttcaacatataatgcccctcttcttgttactactggactaatcaatttcagctatccataatcaatttctctagatgaatccaacaaatattgggattcagtaattacccattacaatttacataccaaaattgcacaataaaaaggctttacctggatattcatggccttcttgttcgcgtcaagttggctttctgcatatagattttgagagttagtaaaaagccaaaagattgacgattaacgtaaaatcatatctcagcatctaaacaaacaaaaagagcgattaaggcactctcagccacgtcgaattccaacaacgagatcgaatcggctgatattaaggctaattgaccattgaattaagagcatgatgtggatgaaattgggttcagatcattagaaacaaaataccttttgcgcctttcatcttctatatgttcttctcacgagccatcttggctttctgaccgttgcctccacccattactgctgaaacggaggtgaattgaaaccctagagagctcttctgttacaggcggtggcggggatacggcagctgcaggggatagagagttcattgcgaggctctatttagacgcgttccactattcgctgggatgatctagtaattttgagatcgggtgaaatacattttcttaagaatgggggtgatcgtcgagagcaatgtttgggagccaaatccagcactgtgtttattcttcttcatatcatgttgcttgtcaatctactatttgccaagcagcaccagaagttccgccattttcgatcacgcaccttcgtcttccttcattcgtttccagagaagtttccttttactctattcgctttcttcagtaatggaaggcttgttggcagtatttggagagtacgacttagcattccatggcattagtagggagcagatggtcatctctctatgtgttggatacgcaactgctctctttgtcggtacctttttgggaatgctctcggatttgattggccagagaaaagtcagcttgttattttgcttgctgcatctttttgttgccgtatggaggagggttactggacatccaactatttggctcgctagcatctgtctgtctcttacctctacaatatttttcttcaacttcgagacatggatggttgttgagcatgataagcttgagcagaggcaggattcagtgaatgacatgttttggttaatgacttttgttgaatctgcatctttcattggaagccaagtggttggtaactggttaattggtggtcatgaaaagacaactttgcttgctccgtccagtgcagtggtaataatggctcttagtgctctggcttatgtcagccgaggatggaaggaagatccaaaatcaattattcttaaagaatatcagactaaatttcatacatacataatcagtgataaaagggtttggcttttgtcatggacccaagctaccatgcacttctcaattgcagttttttggattacttgggctccaaccattgtgtttgtttggatttttaggcagatgggagaggggttttgctaggtttagtatacccctgtgtacttggtgcgaaaatgcttggaagcactgcattttcctggttctctagtggccctttatcactccgaacagaggagtgcttagtatatgcctgtattattatgggctttgtcacttccattgtagcttttgattatcagattgagaaccatgtatgtgcctaatgatcttcgtggaggaatgatgagtttatctatcgctccttcgaacgcgcttatgttgttccttttgattcagagaggtttttaccagaatattgaaaattcaacaattatagctatggcggctcttggtcttttttctgcagctggatgcatgtatatgttaaagcggcatggaaagcaaccacaccagaactggcacaaattatgaccccttccatttgttttaaacttttgtatccatgtgggtgtatcctgtatatagccggccagttagtttaaagataaaggaacagtagccttggaacatgatgatgggtgcaaattaagtagcatgctctgcaaatatggaaaatcaataaagagctgtagccagttccaatgttcagttattctcacgttgcttaaccaatcaggtccagtgggagatctcactatggagttcaattttgctttcgagacactttgcagattgatgccctgaaaaggctaaattaatactttgcttctagtaagtattgtggagaagtgttataccagaggagtaacagaatacatggtggcttagtttgcatgattttaacagctcttcagaattgtgatggtccacggaaagtcttgtttcatattcagagatcaccaaagagtaagagaaatttctcttctttcttatcatgttttctttaaaccggcagacatgatctctatatcatggtgatttttcctttaattatttggttggattgcagatattataatttgaagaaagattacgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0053H21-RnoJv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0053H21.1" temp_strand="+" temp_description="C02SLe0053H21.1  AC226516.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0053H21 sequenced_by:kribb upload_account_name:korea">
        <position start="92644" stop="101024"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="92944" g_stop="93655" g_length="712"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="712" r_length="712" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="93656" i_stop="94810" i_length="1155">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="94811" g_stop="95092" g_length="282"/>
          <reference_exon_boundary r_type="cDNA" r_start="713" r_stop="994" r_length="282" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="95093" i_stop="95926" i_length="834">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="95927" g_stop="96071" g_length="145"/>
          <reference_exon_boundary r_type="cDNA" r_start="995" r_stop="1139" r_length="145" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="96072" i_stop="96537" i_length="466">
            <donor d_prob="0.955" d_score="1.00"/>
            <acceptor a_prob="0.869" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="96538" g_stop="96706" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="1140" r_stop="1308" r_length="169" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="96707" i_stop="97253" i_length="547">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="97254" g_stop="97512" g_length="259"/>
          <reference_exon_boundary r_type="cDNA" r_start="1309" r_stop="1567" r_length="259" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="97513" i_stop="98392" i_length="880">
            <donor d_prob="0.911" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="98393" g_stop="98481" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="1568" r_stop="1656" r_length="89" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="98482" i_stop="99092" i_length="611">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="99093" g_stop="99292" g_length="200"/>
          <reference_exon_boundary r_type="cDNA" r_start="1657" r_stop="1856" r_length="200" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="99293" i_stop="99445" i_length="153">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.854" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="99446" g_stop="99457" g_length="12"/>
          <reference_exon_boundary r_type="cDNA" r_start="1857" r_stop="1868" r_length="12" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="99458" i_stop="99601" i_length="144">
            <donor d_prob="0.920" d_score="0.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="99602" g_stop="99686" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="1869" r_stop="1953" r_length="85" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="99687" i_stop="100024" i_length="338">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="100025" g_stop="100724" g_length="700"/>
          <reference_exon_boundary r_type="cDNA" r_start="1954" r_stop="2653" r_length="700" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0053H21.1" gen_strand="+" ref_id="SGN-U579715" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>2653</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0053H21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U579715" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="92944" e_stop="93655"/>
          <exon e_start="94811" e_stop="95092"/>
          <exon e_start="95927" e_stop="96071"/>
          <exon e_start="96538" e_stop="96706"/>
          <exon e_start="97254" e_stop="97512"/>
          <exon e_start="98393" e_stop="98481"/>
          <exon e_start="99093" e_stop="99292"/>
          <exon e_start="99446" e_stop="99457"/>
          <exon e_start="99602" e_stop="99686"/>
          <exon e_start="100025" e_stop="100724"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTATGAAATATGAACTCATACGAAGATGAAGTTCAACACCATGAAGTTACCAGCCCGAAAAATAATAACAAAAGATTATAGATGGTAAGGATATCCAGGTTATTGATTTATTGGAGTGATTGATCGGTTCTCACCTTCAACATATAATGCCCCTCTTCTTGTTACTACTGGACTAATCAATTTCAGCTATCCATAATCAATTTCTCTAGATGAATCCAACAAATATTGGGATTCAGTAATTACCCATTACAATTTACATACCAAAATTGCACAATAAAAAGGCTTTACCTGGATATTCATGGCCTTCTTGTTCGCGTCAAGTTGGCTTTCTGCATATAGATTTTGAGAGTTAGTAAAAAGCCAAAAGATTGACGATTAACGTAAAATCATATCTCAGCATCTAAACAAACAAAAAGAGCGATTAAGGCACTCTCAGCCACGTCGAATTCCAACAACGAGATCGAATCGGCTGATATTAAGGCTAATTGACCATTGAATTAAGAGCATGATGTGGATGAAATTGGGTTCAGATCATTAGAAACAAAATACCTTTTGCGCCTTTCATCTTCTATATGTTCTTCTCACGAGCCATCTTGGCTTTCTGACCGTTGCCTCCACCCATTACTGCTGAAACGGAGGTGAATTGAAACCCTAGAGAGCTCTTCTGTTACAGGCGGTGGCGGGGATACGGCAGCTGCAGGGGATAGAGAGGTAAAAAAATATGTTGAAAGGACAAGTACGGTATTTTAATTTAATTTCTAAATATTTTAAACATTATTTTAAGAATTTACCATATGCTAAATTTTATCAAAATCTCCTTTTTAGACTCTGTTCGTTTGTATTAGCTTACTAAAAAAATAATTCATGATATTTCATTATACATAAAATGAAAAACAATAATTAAACACTTTGGAGGAATTTATATAAAGAAAATACATCAATACCATAAATACTATAGAGAATAAATGAAGAAAATATGTTTATTGATAGATAATATGTTTATATAATATATAGTGCAAACTTATTGCTATAAATAATAAAAAAATAAAAATATAGCTATAATCTATAACCAATAATTATTCATTAAAAAGTACTCAATTTTTTTCCAACTTGGTTGATGGCTAATACAAAAGGGGTGTATTTTTCTAACAGAAAACTTTCACACATAGCCACTTAAAAATAATTGATTACCCTCAATAGTTATAGTTTGATAATTACAATATGTAGCTACATGTTATATGGAGAAGAGAAGCGAGCGAGCCTGAGAGAGAGAGCAGAGAGGCAAGACAGAGGGGAAAAAGAGCGGAAGAAAGGTGAATTGTATTGTATATGTATATTGGTTAGATAATTATATATTATACGTATGTATTTGTATATATGGCAAGAGAGATTGGGGGATGGAGGAGAAAAACGAGAGAGGGGGAAGAGAGGTGAATATATATATATATAGTATATATATATATATACACACATTTGTATATAGTGCAAGTGAGATTGGGAGAGGGAGGAGATATACGAGTGAGAGATGGTAGAGAGTGGGAGAGAGGTGAATTGTATATGTATATAGATTAAATAATTGTATATTATATATATGTATTTGTATATTTTGACGAATTATACATATACAAACATGACTAATCATACAAATTTGAAGTCAGCTCACATAATTAATGTATAATATTAATCGTGAGTGATAATTATAGCAAACTATTGCTATGATGAGTAATTAAATAGTATAAGTTTGTTTTGTTGCGTAATTTCCCCTCCTAATTGGGCTTAATATGGAGTGTTACATCAGCCCAAAAAAGGTTCTGACCAAATAAATGGGCTTTCAGTTCACTGAAAATTAACCCGCCTTGGAAACAGTTCATTGCGAGGCTCTATTTAGACGCGTTCCACTATTCGCTGGGATGATCTAGTAATTTTGAGATCGGGTGAAATACATTTTCTTAAGAATGGGGGTGATCGTCGAGAGCAATGTTTGGGAGCCAAATCCAGCACTGTGTTTATTCTTCTTCATATCATGTTGCTTGTCAATCTACTATTTGCCAAGCAGCACCAGAAGTTCCGCCATTTTCGATCACGCACCTTCGTCTTCCTTCATTCGTTTCCAGAGAAGTTTCCTTTTACTCTATTCGCTTTCTTCAGGTGACGTTATTTTCCGAGTTGTTTTTTTCTTCCCACTGAATGTAGTATTAGGAAATGTCGCGTTCTAATTAACTCCTAGAGTCTACTTGCTGCTAAAATTGGTGCGAGGTAGTGAACTTTACGTGTTTCCCTGTTTATTAACTGCTGGATTTCCTCTGTTACAAATGTTTGATATTTACCCTCTATTTTGCCAAAAGAGAAAAATGAAACTTCTAGCAGGTTCTGGATTTCATAATTTTAACTTAAAGAAATGAATTAAACTAGTCTGACTTAGTTCTGAAAATGGTCAAGTTGACGTCTCAAACTAATTGGATAGATGGACTATCTCTTAATTTGTATGTTGCTACATTGAGCATTTTATCAAGTTAGATATTTTTTTCATTTGTGGAACACTCAGGTTCACAAAAGTGGATTATCCTGTTGTTATAGTAGAGTAATAAACATCTATACAAATTTGGATCAATCAAATTCAAAAGTTTATTCAAGACTCAATGAAGTTATTCTAACATATGATATTAAAATGTTGATACGGGAACTTTACATTGAATGTGGAGTGTGAATTGATATACTGATACAAGTTGCTCCCGTATAATCTGTTTATTAGCATATTATGATAAGGCTGAGCTGACACCACAAAGTTGTCAATTATTATTTTAACTTGATAGAGATATCGTAGTTACTGATCATAGAACACATGTTAAGGTGTACGCGAAATCACATATTCCATAAAAAAAGTCACGCTTCCCTTTTTATTACATCCTCGATATATAAGTTTGTCCTTTTTATGATTGCTTGGATTCAAAATCGTTATTTATTTAATTTAACTTTTTACAGTAATGGAAGGCTTGTTGGCAGTATTTGGAGAGTACGACTTAGCATTCCATGGCATTAGTAGGGAGCAGATGGTCATCTCTCTATGTGTTGGATACGCAACTGCTCTCTTTGTCGGTACCTTTTTGGGAATGCTCTCGGATTTGATGTAAGGGTACCTGCCTAGTTTTCTGTGTTTACCATGTTCCATCTCTATTTGCATAACCATTATGGTATACTGCAAGTTGCCATTTTCATTCTTTTGGAAATCTATATATCATAAATTCAAAATCTTAGACTACGATTATTTGGTTCAACATCATAATGAAATAGAGCTTCCATTTTGGGAGATATTAAGTATCAATCTCATCTACGTTCCTTTGATGCATTCTTTTTAGACTAAGAGATCATTTTTCTAATAAACTGTCCAACAAAGCTTGAACTTGAAGCTATGTGTTTGACCAGTATATGTTCCAAAGTACTAAACTGTATTGGTCCATGATGATTATCATTATTGTTTTCAATCGTTTATTGTTCTCAAAATTGTGATGGAGCACCATAAGATAAATGATTTTTTTGATTAGTCAAGAATACCATCTGTCAAACTTATTATTATGTTGTCTCTCTTCCTGCAGTGGCCAGAGAAAAGTCAGCTTGTTATTTTGCTTGCTGCATCTTTTTGTTGCCGTATGGAGGAGGGTTACTGGACATCCAACTATTTGGCTCGCTAGCATCTGTCTGTCTCTTACCTCTACAATATTTTTCTTCAACTTCGAGACATGGATGGTTGTTGAGCATGATAAGGTTTGTCTTCGGAATCTCTTTTTGTTATTATTGTATGATTTGCTATTTCATGTGGGAAGTACTATTATGAAGACTTGTTAACTCAAAATGCTTATCCACTTTTTAAAATGAATAAATCTGGGAAATCTTTTTTATACCAAAAAAAGATGATGAATATATGTAGCAAATGCAAAGGGGTTAGGATGGGGGAGTATGGATGTATACTCTATAGTCTTTCAGAGTTTCTTTCTTTGTCAACTACATAAGTTTATTTTGGACCTATTTTGCCGTAGCAGCATATGTGATCACATTTGAAAAAGATGATGAATAAATGTAGCAAATGCAAAGGGGTTAGGGTGGGGGAGTGTGGATCTATAGTCTTTTAGAGTTTCTTTCTCTGCCAACTACATCAGCCTATTTTGGACCTATTCTTCCATAGCAGCATATGTGATCACATTTGAACATTTTTCTCGGTCGGGGAGTCTTCACAGTCAGATTTCAGATCTCTGTATGAATTTGAATCGTTGATAGTAGAGTAAGATGAGTTATCCTTATAATCATTTTGCAGCTTGAGCAGAGGCAGGATTCAGTGAATGACATGTTTTGGTTAATGACTTTTGTTGAATCTGCATCTTTCATTGGAAGCCAAGTGGTTGGTAACTGGTTAATTGGTGGTCATGAAAAGACAACTTTGCTTGCTCCGTCCAGTGCAGTGGTAATAATGGCTCTTAGTGCTCTGGCTTATGTCAGCCGAGGATGGAAGGAAGATCCAAAATCAATTATTCTTAAAGAATATCAGACTAAATTTCATACATACATAATCAGTGGTATGAGTCCTCTATTATTATTCTTATGTTCCTTTTCCTGAAGATATAACTTTCTGTTGTCACAACTTAACTGAGGGACACATTTCCATAGCTAACTGTGACACTAAAAGAAATATTTGATCAATTCTGTGGATCTCCCGATAAAAAGATTCTATAAATTAGTAATATCAGATAAGTTTTACCACTGAAATCCACAATTCGAATATTGGAATTCTTGGATAGTCACAAGAAATCTGGCTTAACTTATTTCCTTACTCTTTTGCGCTTCCCTTTCCAGTAAAAGGAGGCAATGTGCCACATTTGAGTTAAAAAGAAGAAAGGGGCGGTGATAGAAAGAGAGGGAAAGTAAGGAAGGAGGAATTCAAAAGGCTGACCACAATCTCATAGGCATTGTCAATCTGATCTTTCGCTCCGTCTCCAATTGCTCCCTTATTCCCTCGACCAAAGTCCAAACTATGTGTAGCTACCTTATTTTTCTTACTGTGATCTTATTTTGGGTGGTACTTGATCAACTTAGCTCGAAAACAGTAGTCAATACTTTAGAAGAGCATGAAAGCATTACAGAGCCATAAAGCAGAGAGAAATTAACCCATTTATTGTTAATAAATACTACCAGAATGGTAGAACAAACAGTACGAGTATAGTAATCTTCTAATACAAAATGAGGCTGTACCTAATTTGGGTTTATATATTAGTTGAAATGTAATGCTTAAGATAGTTAAAATGGTCCAATTTCAGAAATTAGAAGTTCTGCAACATCTTAATATGATATGAGATGGAGAACATGCATCTTTAAGAAATGCTGTTTTTGATGACTAATTGCATAATTGGGAGTGGTTGGATCGACTTTCTAATCTTTTTCCAATTGTATTCTTGGCAGATAAAAGGGTTTGGCTTTTGTCATGGACCCAAGCTACCATGCACTTCTCAATTGCAGTTTTTTGGATTACTTGGGCTCCAACCATTGTGGTATGATTCTGATAAGATTTCTCGAAAGGATACTGTTTCAGCGTTTCTGACTCTCCAATTCCTATTATTGTTTTCTCATGGAAATGTATTCTAATAGGTGTGCTAAATCTTTTAATCTACTTACCTTAATTTTGAAGAGAGTAGTTGAAGTTATCTATATGAAAACACACCTCCTTGATTAGATTTAAAATGTTTAAAGTTAATTATTCTTTTGTACTTTCGGTCTCAAAATTGGAAATGGAAGTGTATCAAGGAAAAATGGATAGAGGAAGTATTTGAGTTACTACTGTGCGAGGCCTTCTTTGGAAAGATTGATGAGATCCATTCTAATACCGAGAGTAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTGGCTGTGACTGTTTGTGTAAGATAAATCAGAATGTTGACTATACAAGTGCAATAAACCATTTTACTATTATTGAAATCTATGAAGTAATCTTTTTGTGGCCAATATCTATGTCTCTCAAACTTTGTGAATACTGATTTACCAAGATGATTGCTTAACATTACATTTCTTTCCCTTCTGAAATCCTATCTCACCATATTTGTTCCTGGTCCAAAAAGATTGATATATTTTCTCCTTAAAGTTTGTTTGGATTTTTAGGCAGATGGGAGAGGGGTTTTGCTAGGTTTAGTATACCCCTGTGTACTTGGTGCGAAAATGCTTGGAAGCACTGCATTTTCCTGGTTCTCTAGTGGCCCTTTATCACTCCGAACAGAGGAGTGCTTAGTATATGCCTGTATTATTATGGGCTTTGTCACTTCCATTGTAGCTTTTGATTATCAGGTATTTATGAGTTTTCTTATCTTCAAGCTGTTCAAATATCAAGTAATGTCATCAAACTTAATTTGTGATATTGTTGCAGGATGTTGAAATTCTTTTGATGCTATTCTGCATATTTCATGCTTGTGTGGGATTGGTTTTGCCTTCACTTGCCAGATTGAGAACCATGTAAACTATGCTGCACTTATAATTTTCTTATCAGTCATGGCTTTAATAATTGTGTAACCCGACTACTCGAGCATAGCCTGCTCTCTCATATATTTGGCTGGAAGTTTCCTTTCATTCAAGTTCCTTTCTTCCTCTAACATGCAGGTATGTGCCTAATGATCTTCGTGGAGGAATGATGAGTTTATCTATCGCTCCTTCGAACGCGCTTATGTTGTTCCTTTTGATTCAGGCATGTTCTGTTTTATCATATGTATTATATAATCCATTATTTCATCAGAAGAGATCTTCACTTATTATAGTGGACTCCATTCCCAGTAGAACCCATCTAAGTATACAGTGCTTGAACTTTACCTAGATGTTCTTGCTTGGAAATTTATAGTTCTGGGTAGTATCCACATCTTCTCAGTTAAGATAAATGCAATATAGTTTCTTTTATTCTACGTTGAACTTCTAGATAACGTTTTAATTGATTGTATGGTGCCACATGTCAAACTTCATCGTGATGTTCTTTTTTTTTTCTGCTGATTTATTGAATATTTAGATAATCTGCTATTTTGGATTTTGCAGAGAGGTTTTTACCAGAATATTGAAAATTCAACAATTATAGCTATGGCGGCTCTTGGTCTTTTTTCTGCAGCTGGATGCATGTATATGTTAAAGCGGCTTGGAAAGCAACCACACCAGAACTGGCACAAATTATGACCCCTTCCATTTGTTTTAAACTTTTGTATCCATGTGGGTGTATCCTGTATATAGCCGGCCAGTTAGTTTAAAGATAAAGGAACAGTAGCCTTGGAACATGATGATGGGTGCAAATTAAGTAGCATGCTCTGCAAATATGGAAAATCAATAAAGAGCTGTAGCCAGTTTCAATGTTCAGTTATTCTCACGTTGCTTAACCAATCAGGTCCAGTGGGAGATCTCACTATGGAGTTCAATTTTGCTTTCGAGACACTTTGCAGATTGATGCCCTGAAAAGGCTAAATTAATACTTTGCTTCTAGTAAGTATTGTGGAGAAGTGTTATACCAGAGGAGTAACAGAATACATGGTGGCTTAGTTTGCATGATTTTAACAGCTCTTCAGAATTGTGATGGTCCACGGAAAGTCTTGTTTCATATTCAGAGATCACCAAAGAGTAAGAGAAATTTCTCTTCTTTCTTATCATGTTTTCTTTAAACCGGCAGACATGATCTCTATATCATGGTGATTTTTCCTTTAATTATTTGGTTGGATTGCAGATATTATAATTTGAAGAAAGATTACGT</genome_strand>
        <mrna_strand>ATTATGAAATATGAACTCATACGAAGATGAAGTTCAACACCATGAAGTTACCAGCCCGAAAAATAATAACAAAAGATTATAGATGGTAAGGATATCCAGGTTATTGATTTATTGGAGTGATTGATCGGTTCTCACCTTCAACATATAATGCCCCTCTTCTTGTTACTACTGGACTAATCAATTTCAGCTATCCATAATCAATTTCTCTAGATGAATCCAACAAATATTGGGATTCAGTAATTACCCATTACAATTTACATACCAAAATTGCACAATAAAAAGGCTTTACCTGGATATTCATGGCCTTCTTGTTCGCGTCAAGTTGGCTTTCTGCATATAGATTTTGAGAGTTAGTAAAAAGCCAAAAGATTGACGATTAACGTAAAATCATATCTCAGCATCTAAACAAACAAAAAGAGCGATTAAGGCACTCTCAGCCACGTCGAATTCCAACAACGAGATCGAATCGGCTGATATTAAGGCTAATTGACCATTGAATTAAGAGCATGATGTGGATGAAATTGGGTTCAGATCATTAGAAACAAAATACCTTTTGCGCCTTTCATCTTCTATATGTTCTTCTCACGAGCCATCTTGGCTTTCTGACCGTTGCCTCCACCCATTACTGCTGAAACGGAGGTGAATTGAAACCCTAGAGAGCTCTTCTGTTACAGGCGGTGGCGGGGATACGGCAGCTGCAGGGGATAGAGAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCATTGCGAGGCTCTATTTAGACGCGTTCCACTATTCGCTGGGATGATCTAGTAATTTTGAGATCGGGTGAAATACATTTTCTTAAGAATGGGGGTGATCGTCGAGAGCAATGTTTGGGAGCCAAATCCAGCACTGTGTTTATTCTTCTTCATATCATGTTGCTTGTCAATCTACTATTTGCCAAGCAGCACCAGAAGTTCCGCCATTTTCGATCACGCACCTTCGTCTTCCTTCATTCGTTTCCAGAGAAGTTTCCTTTTACTCTATTCGCTTTCTTCAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATGGAAGGCTTGTTGGCAGTATTTGGAGAGTACGACTTAGCATTCCATGGCATTAGTAGGGAGCAGATGGTCATCTCTCTATGTGTTGGATACGCAACTGCTCTCTTTGTCGGTACCTTTTTGGGAATGCTCTCGGATTTGAT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCCAGAGAAAAGTCAGCTTGTTATTTTGCTTGCTGCATCTTTTTGTTGCCGTATGGAGGAGGGTTACTGGACATCCAACTATTTGGCTCGCTAGCATCTGTCTGTCTCTTACCTCTACAATATTTTTCTTCAACTTCGAGACATGGATGGTTGTTGAGCATGATAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGAGCAGAGGCAGGATTCAGTGAATGACATGTTTTGGTTAATGACTTTTGTTGAATCTGCATCTTTCATTGGAAGCCAAGTGGTTGGTAACTGGTTAATTGGTGGTCATGAAAAGACAACTTTGCTTGCTCCGTCCAGTGCAGTGGTAATAATGGCTCTTAGTGCTCTGGCTTATGTCAGCCGAGGATGGAAGGAAGATCCAAAATCAATTATTCTTAAAGAATATCAGACTAAATTTCATACATACATAATCAGTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAAAAGGGTTTGGCTTTTGTCATGGACCCAAGCTACCATGCACTTCTCAATTGCAGTTTTTTGGATTACTTGGGCTCCAACCATTGTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTTTGGATTTTTAGGCAGATGGGAGAGGGGTTTTGCTAGGTTTAGTATACCCCTGTGTACTTGGTGCGAAAATGCTTGGAAGCACTGCATTTTCCTGGTTCTCTAGTGGCCCTTTATCACTCCGAACAGAGGAGTGCTTAGTATATGCCTGTATTATTATGGGCTTTGTCACTTCCATTGTAGCTTTTGATTATCAG.........................................................................................................................................................ATTGAGAACCAT................................................................................................................................................GTATGTGCCTAATGATCTTCGTGGAGGAATGATGAGTTTATCTATCGCTCCTTCGAACGCGCTTATGTTGTTCCTTTTGATTCAG..................................................................................................................................................................................................................................................................................................................................................AGAGGTTTTTACCAGAATATTGAAAATTCAACAATTATAGCTATGGCGGCTCTTGGTCTTTTTTCTGCAGCTGGATGCATGTATATGTTAAAGCGGCATGGAAAGCAACCACACCAGAACTGGCACAAATTATGACCCCTTCCATTTGTTTTAAACTTTTGTATCCATGTGGGTGTATCCTGTATATAGCCGGCCAGTTAGTTTAAAGATAAAGGAACAGTAGCCTTGGAACATGATGATGGGTGCAAATTAAGTAGCATGCTCTGCAAATATGGAAAATCAATAAAGAGCTGTAGCCAGTTCCAATGTTCAGTTATTCTCACGTTGCTTAACCAATCAGGTCCAGTGGGAGATCTCACTATGGAGTTCAATTTTGCTTTCGAGACACTTTGCAGATTGATGCCCTGAAAAGGCTAAATTAATACTTTGCTTCTAGTAAGTATTGTGGAGAAGTGTTATACCAGAGGAGTAACAGAATACATGGTGGCTTAGTTTGCATGATTTTAACAGCTCTTCAGAATTGTGATGGTCCACGGAAAGTCTTGTTTCATATTCAGAGATCACCAAAGAGTAAGAGAAATTTCTCTTCTTTCTTATCATGTTTTCTTTAAACCGGCAGACATGATCTCTATATCATGGTGATTTTTCCTTTAATTATTTGGTTGGATTGCAGATATTATAATTTGAAGAAAGATTACGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0053H21-RnoJv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U591745" ref_strand="+" ref_description="SGN-U591745 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|147781852|emb|CAN72170.1| (e_value=1e-88) hypothetical; (*ATH) AT2G23093.1 (e_value=4e-80) | Symbol: None | expressed protein | chr2:9839203-9841819 FORWARD | Aliases: None; ">
      <seq>ggttcgatacacaactgctctctttgtcggtacctttttgggaatgctctcggatttgattggccacagaaaagtcaccttgttattttgcttgctgcatctttttgttgccgtatggaggagggttactggacatccaactatttggctcgctagcatctgtctgtctcttacctctacaatatttttcttcaacttccagacatggatggttgttgagcatgataagcttgagcagaagcaggattcactgaatgacatgttttggttagtgacttttgttgaatctgcatctttcattggaagccaagtggttggtaactggttaattggcggtcgtgaaaagacaactttgcttgctccgtccagtgcagtggtaataatggctcttagtgctctggcttatgtcagccgaggatggaacgaatatccaaaatcaattattcttaaagaatatcagactagatttcatacatacataatcagtgataaaagggtttggcttttgtcatggacccaagctaccatgcacttctcaattgcagttttttggattacttgggctccaaccattgtggcagatgggagatgggttttgctaggattactatacccctgtgtacttggtgcgaaaatgcttgcaagcactgcattttcctggatctctagtggccctttatcactccgaacagacgagtgcttattatatgcctgcattattatgggcttagccacttccattgcagcttatgattatcaggatgttgaaattctcttgatgctattctgcatatttcatgcttgagtgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0053H21-RnoJv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0053H21.1" temp_strand="+" temp_description="C02SLe0053H21.1  AC226516.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0053H21 sequenced_by:kribb upload_account_name:korea">
        <position start="95713" stop="99720"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="96012" g_stop="96071" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="60" r_length="60" r_score="0.950"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="96072" i_stop="96537" i_length="466">
            <donor d_prob="0.955" d_score="0.98"/>
            <acceptor a_prob="0.869" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="96538" g_stop="96706" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="61" r_stop="229" r_length="169" r_score="0.982"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="96707" i_stop="97253" i_length="547">
            <donor d_prob="0.996" d_score="0.98"/>
            <acceptor a_prob="0.982" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="97254" g_stop="97512" g_length="259"/>
          <reference_exon_boundary r_type="cDNA" r_start="230" r_stop="488" r_length="259" r_score="0.969"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="97513" i_stop="98392" i_length="880">
            <donor d_prob="0.911" d_score="0.98"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="98393" g_stop="98481" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="489" r_stop="577" r_length="89" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="98482" i_stop="99109" i_length="628">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="99110" g_stop="99292" g_length="183"/>
          <reference_exon_boundary r_type="cDNA" r_start="578" r_stop="760" r_length="183" r_score="0.934"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="99293" i_stop="99371" i_length="79">
            <donor d_prob="0.987" d_score="0.90"/>
            <acceptor a_prob="0.982" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="99372" g_stop="99420" g_length="49"/>
          <reference_exon_boundary r_type="cDNA" r_start="761" r_stop="809" r_length="49" r_score="0.959"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0053H21.1" gen_strand="+" ref_id="SGN-U591745" ref_strand="+">
        <total_alignment_score>0.966</total_alignment_score>
        <cumulative_length_of_scored_exons>809</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0053H21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U591745" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="96012" e_stop="96071"/>
          <exon e_start="96538" e_stop="96706"/>
          <exon e_start="97254" e_stop="97512"/>
          <exon e_start="98393" e_stop="98481"/>
          <exon e_start="99110" e_stop="99292"/>
          <exon e_start="99372" e_stop="99420"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTTGGATACGCAACTGCTCTCTTTGTCGGTACCTTTTTGGGAATGCTCTCGGATTTGATGTAAGGGTACCTGCCTAGTTTTCTGTGTTTACCATGTTCCATCTCTATTTGCATAACCATTATGGTATACTGCAAGTTGCCATTTTCATTCTTTTGGAAATCTATATATCATAAATTCAAAATCTTAGACTACGATTATTTGGTTCAACATCATAATGAAATAGAGCTTCCATTTTGGGAGATATTAAGTATCAATCTCATCTACGTTCCTTTGATGCATTCTTTTTAGACTAAGAGATCATTTTTCTAATAAACTGTCCAACAAAGCTTGAACTTGAAGCTATGTGTTTGACCAGTATATGTTCCAAAGTACTAAACTGTATTGGTCCATGATGATTATCATTATTGTTTTCAATCGTTTATTGTTCTCAAAATTGTGATGGAGCACCATAAGATAAATGATTTTTTTGATTAGTCAAGAATACCATCTGTCAAACTTATTATTATGTTGTCTCTCTTCCTGCAGTGGCCAGAGAAAAGTCAGCTTGTTATTTTGCTTGCTGCATCTTTTTGTTGCCGTATGGAGGAGGGTTACTGGACATCCAACTATTTGGCTCGCTAGCATCTGTCTGTCTCTTACCTCTACAATATTTTTCTTCAACTTCGAGACATGGATGGTTGTTGAGCATGATAAGGTTTGTCTTCGGAATCTCTTTTTGTTATTATTGTATGATTTGCTATTTCATGTGGGAAGTACTATTATGAAGACTTGTTAACTCAAAATGCTTATCCACTTTTTAAAATGAATAAATCTGGGAAATCTTTTTTATACCAAAAAAAGATGATGAATATATGTAGCAAATGCAAAGGGGTTAGGATGGGGGAGTATGGATGTATACTCTATAGTCTTTCAGAGTTTCTTTCTTTGTCAACTACATAAGTTTATTTTGGACCTATTTTGCCGTAGCAGCATATGTGATCACATTTGAAAAAGATGATGAATAAATGTAGCAAATGCAAAGGGGTTAGGGTGGGGGAGTGTGGATCTATAGTCTTTTAGAGTTTCTTTCTCTGCCAACTACATCAGCCTATTTTGGACCTATTCTTCCATAGCAGCATATGTGATCACATTTGAACATTTTTCTCGGTCGGGGAGTCTTCACAGTCAGATTTCAGATCTCTGTATGAATTTGAATCGTTGATAGTAGAGTAAGATGAGTTATCCTTATAATCATTTTGCAGCTTGAGCAGAGGCAGGATTCAGTGAATGACATGTTTTGGTTAATGACTTTTGTTGAATCTGCATCTTTCATTGGAAGCCAAGTGGTTGGTAACTGGTTAATTGGTGGTCATGAAAAGACAACTTTGCTTGCTCCGTCCAGTGCAGTGGTAATAATGGCTCTTAGTGCTCTGGCTTATGTCAGCCGAGGATGGAAGGAAGATCCAAAATCAATTATTCTTAAAGAATATCAGACTAAATTTCATACATACATAATCAGTGGTATGAGTCCTCTATTATTATTCTTATGTTCCTTTTCCTGAAGATATAACTTTCTGTTGTCACAACTTAACTGAGGGACACATTTCCATAGCTAACTGTGACACTAAAAGAAATATTTGATCAATTCTGTGGATCTCCCGATAAAAAGATTCTATAAATTAGTAATATCAGATAAGTTTTACCACTGAAATCCACAATTCGAATATTGGAATTCTTGGATAGTCACAAGAAATCTGGCTTAACTTATTTCCTTACTCTTTTGCGCTTCCCTTTCCAGTAAAAGGAGGCAATGTGCCACATTTGAGTTAAAAAGAAGAAAGGGGCGGTGATAGAAAGAGAGGGAAAGTAAGGAAGGAGGAATTCAAAAGGCTGACCACAATCTCATAGGCATTGTCAATCTGATCTTTCGCTCCGTCTCCAATTGCTCCCTTATTCCCTCGACCAAAGTCCAAACTATGTGTAGCTACCTTATTTTTCTTACTGTGATCTTATTTTGGGTGGTACTTGATCAACTTAGCTCGAAAACAGTAGTCAATACTTTAGAAGAGCATGAAAGCATTACAGAGCCATAAAGCAGAGAGAAATTAACCCATTTATTGTTAATAAATACTACCAGAATGGTAGAACAAACAGTACGAGTATAGTAATCTTCTAATACAAAATGAGGCTGTACCTAATTTGGGTTTATATATTAGTTGAAATGTAATGCTTAAGATAGTTAAAATGGTCCAATTTCAGAAATTAGAAGTTCTGCAACATCTTAATATGATATGAGATGGAGAACATGCATCTTTAAGAAATGCTGTTTTTGATGACTAATTGCATAATTGGGAGTGGTTGGATCGACTTTCTAATCTTTTTCCAATTGTATTCTTGGCAGATAAAAGGGTTTGGCTTTTGTCATGGACCCAAGCTACCATGCACTTCTCAATTGCAGTTTTTTGGATTACTTGGGCTCCAACCATTGTGGTATGATTCTGATAAGATTTCTCGAAAGGATACTGTTTCAGCGTTTCTGACTCTCCAATTCCTATTATTGTTTTCTCATGGAAATGTATTCTAATAGGTGTGCTAAATCTTTTAATCTACTTACCTTAATTTTGAAGAGAGTAGTTGAAGTTATCTATATGAAAACACACCTCCTTGATTAGATTTAAAATGTTTAAAGTTAATTATTCTTTTGTACTTTCGGTCTCAAAATTGGAAATGGAAGTGTATCAAGGAAAAATGGATAGAGGAAGTATTTGAGTTACTACTGTGCGAGGCCTTCTTTGGAAAGATTGATGAGATCCATTCTAATACCGAGAGTAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTGGCTGTGACTGTTTGTGTAAGATAAATCAGAATGTTGACTATACAAGTGCAATAAACCATTTTACTATTATTGAAATCTATGAAGTAATCTTTTTGTGGCCAATATCTATGTCTCTCAAACTTTGTGAATACTGATTTACCAAGATGATTGCTTAACATTACATTTCTTTCCCTTCTGAAATCCTATCTCACCATATTTGTTCCTGGTCCAAAAAGATTGATATATTTTCTCCTTAAAGTTTGTTTGGATTTTTAGGCAGATGGGAGAGGGGTTTTGCTAGGTTTAGTATACCCCTGTGTACTTGGTGCGAAAATGCTTGGAAGCACTGCATTTTCCTGGTTCTCTAGTGGCCCTTTATCACTCCGAACAGAGGAGTGCTTAGTATATGCCTGTATTATTATGGGCTTTGTCACTTCCATTGTAGCTTTTGATTATCAGGTATTTATGAGTTTTCTTATCTTCAAGCTGTTCAAATATCAAGTAATGTCATCAAACTTAATTTGTGATATTGTTGCAGGATGTTGAAATTCTTTTGATGCTATTCTGCATATTTCATGCTTGTGTGG</genome_strand>
        <mrna_strand>GGTTCGATACACAACTGCTCTCTTTGTCGGTACCTTTTTGGGAATGCTCTCGGATTTGAT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCCACAGAAAAGTCACCTTGTTATTTTGCTTGCTGCATCTTTTTGTTGCCGTATGGAGGAGGGTTACTGGACATCCAACTATTTGGCTCGCTAGCATCTGTCTGTCTCTTACCTCTACAATATTTTTCTTCAACTTCCAGACATGGATGGTTGTTGAGCATGATAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGAGCAGAAGCAGGATTCACTGAATGACATGTTTTGGTTAGTGACTTTTGTTGAATCTGCATCTTTCATTGGAAGCCAAGTGGTTGGTAACTGGTTAATTGGCGGTCGTGAAAAGACAACTTTGCTTGCTCCGTCCAGTGCAGTGGTAATAATGGCTCTTAGTGCTCTGGCTTATGTCAGCCGAGGATGGAACGAATATCCAAAATCAATTATTCTTAAAGAATATCAGACTAGATTTCATACATACATAATCAGTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAAAAGGGTTTGGCTTTTGTCATGGACCCAAGCTACCATGCACTTCTCAATTGCAGTTTTTTGGATTACTTGGGCTCCAACCATTGTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGATGGGAGATGGGTTTTGCTAGGATTACTATACCCCTGTGTACTTGGTGCGAAAATGCTTGCAAGCACTGCATTTTCCTGGATCTCTAGTGGCCCTTTATCACTCCGAACAGACGAGTGCTTATTATATGCCTGCATTATTATGGGCTTAGCCACTTCCATTGCAGCTTATGATTATCAG...............................................................................GATGTTGAAATTCTCTTGATGCTATTCTGCATATTTCATGCTTGAGTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0053H21-RnoJv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U568348" ref_strand="+" ref_description="SGN-U568348 Tomato 200607#2 [31 ESTs aligned] (*GB) gi|148299083|gb|ABQ58079.1| (e_value=0) subtilisin-like; (*ATH) AT5G67360.1 (e_value=0) | Symbol: None | cucumisin-like serine protease (ARA12), Asp48; almost identical to cucumisin-like serine protease (ARA12) GI:3176874 from (Arabidopsis thaliana) | chr5:26889117-26891805 REVERSE | Aliases: K8K14.8, K8K14_8; (*SWP) sp|O65351|SUBL_ARATH (e_value=0) Subtilisin-like protease OS=Arabidopsis thaliana GN=ARA12; ">
      <seq>catacgttaagaaatgtgatccttctttttttactctttaatctttattttatcacttggtctgctaggctggctgtttccaatcattcataaaaagaaaacaacatcaacatctagccccactcttttaattttcctatatatattaccttaagtttctcattgcttgttcatccactccctcttattaatgcagcagtccaagcgaaaaattaatcaaaaatgtctacatacacactactagttgttgtacttgtgtgcctatgtcacatgtctgtggcaatggtggagaagaaaacatacatcattcacatggctaaatcacaaatgccagcaatatttgatgatcatactcactggtatgacgcgtccctcaaatccgtctctgaatcagcagagatgatctatgtttataaaaacgttgttcatggttttgcagcaaggcttacagctcgacaagctgaatccttagagacccaacctgggattctctctgttttgcctgagctgatataccaactccacactactcggacacctctttttttgggacttgatagaagtgttaatatctttcctgagtccgatgctatgagtgatgtcattgtcggagtactcgatacaggggtttggccggagagaaagagctttgacgatactggatttggacctgtaccagattcgtggaaaggtgagtgtgagtccagcaacaacttcagttctgccatgtgtaacagaaagcttgttggagcgaggtatttttctaggggttatgaaactactcttggaccaattgatgagtccaaggagtctaaatctcctagggatgatgatggacatggaacacacactgcttcgacagcagctggttcagttgttcagggtgctagcctttttggttatgcttcaggaactgctcgtggaatggcctatcgtgccagagttgccatgtacaaagtttgctggcttgggggatgttttaactctgacatattggcagggatggacaaagccattgatgataaagttgatgtgctttcattatcacttggtggaagcacaccagattactacaaagatagcattgcaattggagcttttgctgctatggagaagggtattttggtttcttgctctgctggaaatgctggacctaatcaattcagtttggccaaccaagcaccttggatcaccacagtcggtgctggaacaattgaccgtgattttccagcatatgtaagccttggcaatggtaaaaatttctccggcgtttcactttacgcgggtgattcattacttaataaaatgcttcccttggtgtatgctggtaatgccagcaatgtaaccagtggaaatctctgtatgatgggtaccttaattcctgagaaagttaaaggaaaaattgtgctgtgtgacagagggattagcgctcgagtccaaaagggttttgtggtaaaagaggctggtggagccggcatggttttggctaacaccgcagcaaatggggaggaactagtggctgacgcccatttacttccagcggcggcggtgggtcaaaaagccggtgatgtaatcaagaaatatttattctcagatcctaatccaacggccgaaattctttttggaggaacaaaagtagacatcgaaccgtcaccggttgtcgcagcgttcagttctagaggcccaaattcaatcaccccggagatactcaaaccggatattatcgcgcccggtgtaaacattctggccggttggaccggagccgtcggcccgacggggatggcagaggacgatagacgggtcgagttcaacattatctcaggcacatccatgtcgtgtccacacgtgagcggcttggcggctttgataaaaggagtccacccagaatggagccccgccgccattcgttcggcgctcatgacctccgcttacaccgtctacaagaacggcggagcactagtagatgtcgccaccggaaaaccatctacacctttcgaccacggcgctggacacgtggatcccgtttcggcagtgaacccaggtcttgtttacgacataaacgccgatgattacctcaatttcatgtgtgcattgaaatacactccatcacaaatcaacagcttagcgagaagaaacttcacgtgtgattcaagcaaaacatacagcgtcacagatttgaattacccttcatttgctgtttcattcgttgccgggagtgacggttcaaacacaatcaagtacagccggacattgactaatgttggaccggctggaacatacaaagttacagtttcttccccaaatagttcagtgaaaattatagttgagcctgaaacattgagtttcactcagattaatgagaagaaatcgtatacagtgagttttactgctccatcaaagtcctcagctacggatgtattcggtagaattgagtggtcagatgggaagcatgtggttagtagtccagttgcaatttcttggtcatgaataatatgaagacatagctatagcttctgttaattttatgtataagttgatgtttttctgcttttaagtttcattccagcacaaaagtttgtagctggtctcaagatttttttatggataacatgaaagaatcaaagaaatgtatgccttatacaatatcttgctcactgtacggtattttaagcaattctaattgtgaactgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0053H21-RnoJv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0053H21.1" temp_strand="-" temp_description="C02SLe0053H21.1  AC226516.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0053H21 sequenced_by:kribb upload_account_name:korea">
        <position start="106274" stop="102984"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="105974" g_stop="103284" g_length="2691"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="2691" r_length="2691" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0053H21.1" gen_strand="-" ref_id="SGN-U568348" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>2691</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0053H21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U568348" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="105974" e_stop="103284"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATACGTTAAGAAATGTGATCCTTCTTTTTTTACTCTTTAATCTTTATTTTATCACTTGGTCTGCTAGGCTGGCTGTTTCCAATCATTCATAAAAAGAAAACAACATCAACATCTAGCCCCACTCTTTTAATTTTCCTATATATATTACCTTAAGTTTCTCATTGCTTGTTCATCCACTCCCTCTTATTAATGCAGCAGTCCAAGCGAAAAATTAATCAAAAATGTCTACATACACACTACTAGTTGTTGTACTTGTGTGCCTATGTCACATGTCTGTGGCAATGGTGGAGAAGAAAACATACATCATTCACATGGCTAAATCACAAATGCCAGCAATATTTGATGATCATACTCACTGGTATGACGCGTCCCTCAAATCCGTCTCTGAATCAGCAGAGATGATCTATGTTTATAAAAACGTTGTTCATGGTTTTGCAGCAAGGCTTACAGCTCGACAAGCTGAATCCTTAGAGACCCAACCTGGGATTCTCTCTGTTTTGCCTGAGCTGATATACCAACTCCACACTACTCGGACACCTCTTTTTTTGGGACTTGATAGAAGTGTTAATATCTTTCCTGAGTCCGATGCTATGAGTGATGTCATTGTCGGAGTACTCGATACAGGGGTTTGGCCGGAGAGAAAGAGCTTTGACGATACTGGATTTGGACCTGTACCAGATTCGTGGAAAGGTGAGTGTGAGTCCAGCAACAACTTCAGTTCTGCCATGTGTAACAGAAAGCTTGTTGGAGCGAGGTATTTTTCTAGGGGTTATGAAACTACTCTTGGACCAATTGATGAGTCCAAGGAGTCTAAATCTCCTAGGGATGATGATGGACATGGAACACACACTGCTTCGACAGCAGCTGGTTCAGTTGTTCAGGGTGCTAGCCTTTTTGGTTATGCTTCAGGAACTGCTCGTGGAATGGCCTATCGTGCCAGAGTTGCCATGTACAAAGTTTGCTGGCTTGGGGGATGTTTTAACTCTGACATATTGGCAGGGATGGACAAAGCCATTGATGATAAAGTTGATGTGCTTTCATTATCACTTGGTGGAAGCACACCAGATTACTACAAAGATAGCATTGCAATTGGAGCTTTTGCTGCTATGGAGAAGGGTATTTTGGTTTCTTGCTCTGCTGGAAATGCTGGACCTAATCAATTCAGTTTGGCCAACCAAGCACCTTGGATCACCACAGTCGGTGCTGGAACAATTGACCGTGATTTTCCAGCATATGTAAGCCTTGGCAATGGTAAAAATTTCTCCGGCGTTTCACTTTACGCGGGTGATTCATTACTTAATAAAATGCTTCCCTTGGTGTATGCTGGTAATGCCAGCAATGTAACCAGTGGAAATCTCTGTATGATGGGTACCTTAATTCCTGAGAAAGTTAAAGGAAAAATTGTGCTGTGTGACAGAGGGATTAGCGCTCGAGTCCAAAAGGGTTTTGTGGTAAAAGAGGCTGGTGGAGCCGGCATGGTTTTGGCTAACACCGCAGCAAATGGGGAGGAACTAGTGGCTGACGCCCATTTACTTCCAGCGGCGGCGGTGGGTCAAAAAGCCGGTGATGTAATCAAGAAATATTTATTCTCAGATCCTAATCCAACGGCCGAAATTCTTTTTGGAGGAACAAAAGTAGACATCGAACCGTCACCGGTTGTCGCAGCGTTCAGTTCTAGAGGCCCAAATTCAATCACCCCGGAGATACTCAAACCGGATATTATCGCGCCCGGTGTAAACATTCTGGCCGGTTGGACCGGAGCCGTCGGCCCGACGGGGATGGCAGAGGACGATAGACGGGTCGAGTTCAACATTATCTCAGGCACATCCATGTCGTGTCCACACGTGAGCGGCTTGGCGGCTTTGATAAAAGGAGTCCACCCAGAATGGAGCCCCGCCGCCATTCGTTCGGCGCTCATGACCTCCGCTTACACCGTCTACAAGAACGGCGGAGCACTAGTAGATGTCGCCACCGGAAAACCATCTACACCTTTCGACCACGGCGCTGGACACGTGGATCCCGTTTCGGCAGTGAACCCAGGTCTTGTTTACGACATAAACGCCGATGATTACCTCAATTTCATGTGTGCATTGAAATACACTCCATCACAAATCAACAGCTTAGCGAGAAGAAACTTCACGTGTGATTCAAGCAAAACATACAGCGTCACAGATTTGAATTACCCTTCATTTGCTGTTTCATTCGTTGCCGGGAGTGACGGTTCAAACACAATCAAGTACAGCCGGACATTGACTAATGTTGGACCGGCTGGAACATACAAAGTTACAGTTTCTTCCCCAAATAGTTCAGTGAAAATTATAGTTGAGCCTGAAACATTGAGTTTCACTCAGATTAATGAGAAGAAATCGTATACAGTGAGTTTTACTGCTCCATCAAAGTCCTCAGCTACGGATGTATTCGGTAGAATTGAGTGGTCAGATGGGAAGCATGTGGTTAGTAGTCCAGTTGCAATTTCTTGGTCATGAATAATATGAAGACATAGCTATAGCTTCTGTTAATTTTATGTATAAGTTGATGTTTTTCTGCTTTTAAGTTTCATTCCAGCACAAAAGTTTGTAGCTGGTCTCAAGATTTTTTTATGGATAACATGAAAGAATCAAAGAAATGTATGCCTTATACAATATCTTGCTCACTGTACGGTATTTTAAGCAATTCTAATTGTGAACTGT</genome_strand>
        <mrna_strand>CATACGTTAAGAAATGTGATCCTTCTTTTTTTACTCTTTAATCTTTATTTTATCACTTGGTCTGCTAGGCTGGCTGTTTCCAATCATTCATAAAAAGAAAACAACATCAACATCTAGCCCCACTCTTTTAATTTTCCTATATATATTACCTTAAGTTTCTCATTGCTTGTTCATCCACTCCCTCTTATTAATGCAGCAGTCCAAGCGAAAAATTAATCAAAAATGTCTACATACACACTACTAGTTGTTGTACTTGTGTGCCTATGTCACATGTCTGTGGCAATGGTGGAGAAGAAAACATACATCATTCACATGGCTAAATCACAAATGCCAGCAATATTTGATGATCATACTCACTGGTATGACGCGTCCCTCAAATCCGTCTCTGAATCAGCAGAGATGATCTATGTTTATAAAAACGTTGTTCATGGTTTTGCAGCAAGGCTTACAGCTCGACAAGCTGAATCCTTAGAGACCCAACCTGGGATTCTCTCTGTTTTGCCTGAGCTGATATACCAACTCCACACTACTCGGACACCTCTTTTTTTGGGACTTGATAGAAGTGTTAATATCTTTCCTGAGTCCGATGCTATGAGTGATGTCATTGTCGGAGTACTCGATACAGGGGTTTGGCCGGAGAGAAAGAGCTTTGACGATACTGGATTTGGACCTGTACCAGATTCGTGGAAAGGTGAGTGTGAGTCCAGCAACAACTTCAGTTCTGCCATGTGTAACAGAAAGCTTGTTGGAGCGAGGTATTTTTCTAGGGGTTATGAAACTACTCTTGGACCAATTGATGAGTCCAAGGAGTCTAAATCTCCTAGGGATGATGATGGACATGGAACACACACTGCTTCGACAGCAGCTGGTTCAGTTGTTCAGGGTGCTAGCCTTTTTGGTTATGCTTCAGGAACTGCTCGTGGAATGGCCTATCGTGCCAGAGTTGCCATGTACAAAGTTTGCTGGCTTGGGGGATGTTTTAACTCTGACATATTGGCAGGGATGGACAAAGCCATTGATGATAAAGTTGATGTGCTTTCATTATCACTTGGTGGAAGCACACCAGATTACTACAAAGATAGCATTGCAATTGGAGCTTTTGCTGCTATGGAGAAGGGTATTTTGGTTTCTTGCTCTGCTGGAAATGCTGGACCTAATCAATTCAGTTTGGCCAACCAAGCACCTTGGATCACCACAGTCGGTGCTGGAACAATTGACCGTGATTTTCCAGCATATGTAAGCCTTGGCAATGGTAAAAATTTCTCCGGCGTTTCACTTTACGCGGGTGATTCATTACTTAATAAAATGCTTCCCTTGGTGTATGCTGGTAATGCCAGCAATGTAACCAGTGGAAATCTCTGTATGATGGGTACCTTAATTCCTGAGAAAGTTAAAGGAAAAATTGTGCTGTGTGACAGAGGGATTAGCGCTCGAGTCCAAAAGGGTTTTGTGGTAAAAGAGGCTGGTGGAGCCGGCATGGTTTTGGCTAACACCGCAGCAAATGGGGAGGAACTAGTGGCTGACGCCCATTTACTTCCAGCGGCGGCGGTGGGTCAAAAAGCCGGTGATGTAATCAAGAAATATTTATTCTCAGATCCTAATCCAACGGCCGAAATTCTTTTTGGAGGAACAAAAGTAGACATCGAACCGTCACCGGTTGTCGCAGCGTTCAGTTCTAGAGGCCCAAATTCAATCACCCCGGAGATACTCAAACCGGATATTATCGCGCCCGGTGTAAACATTCTGGCCGGTTGGACCGGAGCCGTCGGCCCGACGGGGATGGCAGAGGACGATAGACGGGTCGAGTTCAACATTATCTCAGGCACATCCATGTCGTGTCCACACGTGAGCGGCTTGGCGGCTTTGATAAAAGGAGTCCACCCAGAATGGAGCCCCGCCGCCATTCGTTCGGCGCTCATGACCTCCGCTTACACCGTCTACAAGAACGGCGGAGCACTAGTAGATGTCGCCACCGGAAAACCATCTACACCTTTCGACCACGGCGCTGGACACGTGGATCCCGTTTCGGCAGTGAACCCAGGTCTTGTTTACGACATAAACGCCGATGATTACCTCAATTTCATGTGTGCATTGAAATACACTCCATCACAAATCAACAGCTTAGCGAGAAGAAACTTCACGTGTGATTCAAGCAAAACATACAGCGTCACAGATTTGAATTACCCTTCATTTGCTGTTTCATTCGTTGCCGGGAGTGACGGTTCAAACACAATCAAGTACAGCCGGACATTGACTAATGTTGGACCGGCTGGAACATACAAAGTTACAGTTTCTTCCCCAAATAGTTCAGTGAAAATTATAGTTGAGCCTGAAACATTGAGTTTCACTCAGATTAATGAGAAGAAATCGTATACAGTGAGTTTTACTGCTCCATCAAAGTCCTCAGCTACGGATGTATTCGGTAGAATTGAGTGGTCAGATGGGAAGCATGTGGTTAGTAGTCCAGTTGCAATTTCTTGGTCATGAATAATATGAAGACATAGCTATAGCTTCTGTTAATTTTATGTATAAGTTGATGTTTTTCTGCTTTTAAGTTTCATTCCAGCACAAAAGTTTGTAGCTGGTCTCAAGATTTTTTTATGGATAACATGAAAGAATCAAAGAAATGTATGCCTTATACAATATCTTGCTCACTGTACGGTATTTTAAGCAATTCTAATTGTGAACTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0053H21-RnoJv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U599729" ref_strand="+" ref_description="SGN-U599729 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>acactaaaagctactccatttctgtatggacccgtgaaccactattgttcataatggtaaagatttatttctccttttatctttattattatagttattggaagttggaaatcgtcaagcctcttcatgaaatctacagcatttattaatcgaagtgtccttcagcaatgaatttccctaccaactgaaatctgtaaaaaaaaataaaaaatctacggaatactttgctccatatcctcattgcgaaactatgattgagaataaaagagtactcaccatctttgcggatggccattaatgtaggtaaaaagaaaatgaaatttggatggcaacttgaagaattttgcgattctgttttttttttcttttttgnnncttttcttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0053H21-RnoJv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0053H21.1" temp_strand="-" temp_description="C02SLe0053H21.1  AC226516.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0053H21 sequenced_by:kribb upload_account_name:korea">
        <position start="106784" stop="105813"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="106484" g_stop="106101" g_length="384"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="384" r_length="384" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0053H21.1" gen_strand="-" ref_id="SGN-U599729" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>384</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0053H21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U599729" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="106484" e_stop="106101"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACACTAAAAGCTACTCCATTTCTGTATGGACCCGTGAACCACTATTGTTCATAATGGTAAAGATTTATTTCTCCTTTTATCTTTATTATTATAGTTATTGGAAGTTGGAAATCGTCAAGCCTCTTCATGAAATCTACAGCATTTATTAATCGAAGTGTCCTTCAGCAATGAATTTCCCTACCAACTGAAATCTGTAAAAAAAAATAAAAAATCTACGGAATACTTTGCTCCATATCCTCATTGCGAAACTATGATTGAGAATAAAAGAGTACTCACCATCTTTGCGGATGGCCATTAATGTAGGTAAAAAGAAAATGAAATTTGGATGGCAACTTGAAGAATTTTGCGATTCTGTTTTTTTTTTCTTTTTTGTAGCTTTTCTTG</genome_strand>
        <mrna_strand>ACACTAAAAGCTACTCCATTTCTGTATGGACCCGTGAACCACTATTGTTCATAATGGTAAAGATTTATTTCTCCTTTTATCTTTATTATTATAGTTATTGGAAGTTGGAAATCGTCAAGCCTCTTCATGAAATCTACAGCATTTATTAATCGAAGTGTCCTTCAGCAATGAATTTCCCTACCAACTGAAATCTGTAAAAAAAAATAAAAAATCTACGGAATACTTTGCTCCATATCCTCATTGCGAAACTATGATTGAGAATAAAAGAGTACTCACCATCTTTGCGGATGGCCATTAATGTAGGTAAAAAGAAAATGAAATTTGGATGGCAACTTGAAGAATTTTGCGATTCTGTTTTTTTTTTCTTTTTTGNNNCTTTTCTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0053H21-RnoJv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U568349" ref_strand="+" ref_description="SGN-U568349 Tomato 200607#2 [8 ESTs aligned] (*GB) gi|148299083|gb|ABQ58079.1| (e_value=0) subtilisin-like; (*ATH) AT5G67360.1 (e_value=0) | Symbol: None | cucumisin-like serine protease (ARA12), Asp48; almost identical to cucumisin-like serine protease (ARA12) GI:3176874 from (Arabidopsis thaliana) | chr5:26889117-26891805 REVERSE | Aliases: K8K14.8, K8K14_8; (*SWP) sp|O65351|SUBL_ARATH (e_value=0) Subtilisin-like protease OS=Arabidopsis thaliana GN=ARA12; ">
      <seq>ggcctttttggttatgcttcaggaactgctcgtggaatggcttatcgtgccagagttgccgtctacaaggtttgctggcttgggaaatgctttggccccgacatattggcaggtatggacaaagccattgatgataatgttaatgtgctttcattatcacttggtggagagcattttgatttctacagcgacgatgttgcaattggagcatttgctgcaatggagaagggtattatggtttcttgctctgctggaaatgctggacccaatcaattcagtttggctaaccaagcaccttggatcaccaccgtgggtgccggaacagttgaccgtgattttccagcatatgtaagccttggcaatggtaaaaatttctccggtgtttcactttacgcgggtgatccattacccagtgggatgcttcccttggtgtatgcaggtaatgccagcaatgcaaccaatggaaatctctgtataatgggaaccttaattcctgagaaagttaaaggcaaaattgtgctgtgtgacggaggggttaacgtcagagctgaaaagggttatgtggtaaaatcagccggtggagccggcatgatttttgctaacacaaatgggctggggctactggctgacgcccatttacttccagcggcggctgtgggtcaattagatggcgatgaaatcaagaagtatataacatcagatcctaatccaacggccacgattctttttggaggaacaatggtaggagtccaaccagcaccgattcttgcagcgttcagttccagaggcccaaattccatcacgccggagatacttaagccggatatcatcgcgccaggtgtcaatattctggccggttggagcggtgcagtcggtcctacggggttgcctgaggacgatagacgggtcgagttcaacattatctcaggcacatccatgtcgtgtccacacgtgagtggcttagcggctttgctcaaaggagtccacccagaatggagccccgccgccattcgttcggcgctcatgaccaccgcttacaccacctacaggaacggcggagcactactagacgtagctaccggaaaaccatctacacctttcggtcacggcgctgggcacgtggatcccgtttcagcggtgaacccaggtcttgtttacgacataaacgccgatgattacctcaatttcctgtgtgcattgaaatacagtccatcacaaatcaatatcatagcaagaagaaacttcacatgtgattcaagcaaaatatacagcgtcacagatttgaattacccttcgttttcagttgcattccctgccgataccggttcaaacacaatcagatacagccggacactgactaatgttggaccgtctggaacatacaaagttgctgttactttgcccgatagttccgtggaaattatagttgaacctgaaacagttagttttactcaaattaatgagaagatatcgtatagtgtgagttgtactgctccatcaaagcccccatctaccaatgtattcagcaaaattgagtggtcagatgggacgcatttggtcactagaccagatgcaatttcttggtcatgaattatatgaacacattaaagagctatatatagctgctatcgatttaatgtgaagttaatcatagaaatctatgcttcttgctcacagtgcagtgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0053H21-RnoJv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0053H21.1" temp_strand="-" temp_description="C02SLe0053H21.1  AC226516.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0053H21 sequenced_by:kribb upload_account_name:korea">
        <position start="111280" stop="108996"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="110981" g_stop="109296" g_length="1686"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="1686" r_length="1686" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0053H21.1" gen_strand="-" ref_id="SGN-U568349" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>1686</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0053H21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U568349" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="110981" e_stop="109296"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCCTTTTTGGTTATGCTTCAGGAACTGCTCGTGGAATGGCTTATCGTGCCAGAGTTGCCGTCTACAAGGTTTGCTGGCTTGGGAAATGCTTTGGCCCCGACATATTGGCAGGTATGGACAAAGCCATTGATGATAATGTTAATGTGCTTTCATTATCACTTGGTGGAGAGCATTTTGATTTCTACAGCGACGATGTTGCAATTGGAGCATTTGCTGCAATGGAGAAGGGTATTATGGTTTCTTGCTCTGCTGGAAATGCTGGACCCAATCAATTCAGTTTGGCTAACCAAGCACCTTGGATCACCACCGTGGGTGCCGGAACAGTTGACCGTGATTTTCCAGCATATGTAAGCCTTGGCAATGGTAAAAATTTCTCCGGTGTTTCACTTTACGCGGGTGATCCATTACCCAGTGGGATGCTTCCCTTGGTGTATGCAGGTAATGCCAGCAATGCAACCAATGGAAATCTCTGTATAATGGGAACCTTAATTCCTGAGAAAGTTAAAGGCAAAATTGTGCTGTGTGACGGAGGGGTTAACGTCAGAGCTGAAAAGGGTTATGTGGTAAAATCAGCCGGTGGAGCCGGCATGATTTTTGCTAACACAAATGGGCTGGGGCTACTGGCTGACGCCCATTTACTTCCAGCGGCGGCTGTGGGTCAATTAGATGGCGATGAAATCAAGAAGTATATAACATCAGATCCTAATCCAACGGCCACGATTCTTTTTGGAGGAACAATGGTAGGAGTCCAACCAGCACCGATTCTTGCAGCGTTCAGTTCCAGAGGCCCAAATTCCATCACGCCGGAGATACTTAAGCCGGATATCATCGCGCCAGGTGTCAATATTCTGGCCGGTTGGAGCGGTGCAGTCGGTCCTACGGGGTTGCCTGAGGACGATAGACGGGTCGAGTTCAACATTATCTCAGGCACATCCATGTCGTGTCCACACGTGAGTGGCTTAGCGGCTTTGCTCAAAGGAGTCCACCCAGAATGGAGCCCCGCCGCCATTCGTTCGGCGCTCATGACCACCGCTTACACCACCTACAGGAACGGCGGAGCACTACTAGACGTAGCTACCGGAAAACCATCTACACCTTTCGGTCACGGCGCTGGGCACGTGGATCCCGTTTCAGCGGTGAACCCAGGTCTTGTTTACGACATAAACGCCGATGATTACCTCAATTTCCTGTGTGCATTGAAATACAGTCCATCACAAATCAATATCATAGCAAGAAGAAACTTCACATGTGATTCAAGCAAAATATACAGCGTCACAGATTTGAATTACCCTTCGTTTTCAGTTGCATTCCCTGCCGATACCGGTTCAAACACAATCAGATACAGCCGGACACTGACTAATGTTGGACCGTCTGGAACATACAAAGTTGCTGTTACTTTGCCCGATAGTTCCGTGGAAATTATAGTTGAACCTGAAACAGTTAGTTTTACTCAGATTAATGAGAAGATATCGTATAGTGTGAGTTTTACTGCTCCATCAAAGCCCCCATCTACCAATGTATTCGGCAAAATTGAGTGGTCAGATGGGACGCATTTGGTCACTAGTCCAGTTGCAATTTCTTGGTCATGAATTATATGAACAAATTAAAGAGCTATATATAGCTGCTATCGATTTAATGTAAAGTTAATCAAAGAAATTTATGCTTCTTGCTCACAGTGCAGTGAT</genome_strand>
        <mrna_strand>GGCCTTTTTGGTTATGCTTCAGGAACTGCTCGTGGAATGGCTTATCGTGCCAGAGTTGCCGTCTACAAGGTTTGCTGGCTTGGGAAATGCTTTGGCCCCGACATATTGGCAGGTATGGACAAAGCCATTGATGATAATGTTAATGTGCTTTCATTATCACTTGGTGGAGAGCATTTTGATTTCTACAGCGACGATGTTGCAATTGGAGCATTTGCTGCAATGGAGAAGGGTATTATGGTTTCTTGCTCTGCTGGAAATGCTGGACCCAATCAATTCAGTTTGGCTAACCAAGCACCTTGGATCACCACCGTGGGTGCCGGAACAGTTGACCGTGATTTTCCAGCATATGTAAGCCTTGGCAATGGTAAAAATTTCTCCGGTGTTTCACTTTACGCGGGTGATCCATTACCCAGTGGGATGCTTCCCTTGGTGTATGCAGGTAATGCCAGCAATGCAACCAATGGAAATCTCTGTATAATGGGAACCTTAATTCCTGAGAAAGTTAAAGGCAAAATTGTGCTGTGTGACGGAGGGGTTAACGTCAGAGCTGAAAAGGGTTATGTGGTAAAATCAGCCGGTGGAGCCGGCATGATTTTTGCTAACACAAATGGGCTGGGGCTACTGGCTGACGCCCATTTACTTCCAGCGGCGGCTGTGGGTCAATTAGATGGCGATGAAATCAAGAAGTATATAACATCAGATCCTAATCCAACGGCCACGATTCTTTTTGGAGGAACAATGGTAGGAGTCCAACCAGCACCGATTCTTGCAGCGTTCAGTTCCAGAGGCCCAAATTCCATCACGCCGGAGATACTTAAGCCGGATATCATCGCGCCAGGTGTCAATATTCTGGCCGGTTGGAGCGGTGCAGTCGGTCCTACGGGGTTGCCTGAGGACGATAGACGGGTCGAGTTCAACATTATCTCAGGCACATCCATGTCGTGTCCACACGTGAGTGGCTTAGCGGCTTTGCTCAAAGGAGTCCACCCAGAATGGAGCCCCGCCGCCATTCGTTCGGCGCTCATGACCACCGCTTACACCACCTACAGGAACGGCGGAGCACTACTAGACGTAGCTACCGGAAAACCATCTACACCTTTCGGTCACGGCGCTGGGCACGTGGATCCCGTTTCAGCGGTGAACCCAGGTCTTGTTTACGACATAAACGCCGATGATTACCTCAATTTCCTGTGTGCATTGAAATACAGTCCATCACAAATCAATATCATAGCAAGAAGAAACTTCACATGTGATTCAAGCAAAATATACAGCGTCACAGATTTGAATTACCCTTCGTTTTCAGTTGCATTCCCTGCCGATACCGGTTCAAACACAATCAGATACAGCCGGACACTGACTAATGTTGGACCGTCTGGAACATACAAAGTTGCTGTTACTTTGCCCGATAGTTCCGTGGAAATTATAGTTGAACCTGAAACAGTTAGTTTTACTCAAATTAATGAGAAGATATCGTATAGTGTGAGTTGTACTGCTCCATCAAAGCCCCCATCTACCAATGTATTCAGCAAAATTGAGTGGTCAGATGGGACGCATTTGGTCACTAGACCAGATGCAATTTCTTGGTCATGAATTATATGAACACATTAAAGAGCTATATATAGCTGCTATCGATTTAATGTGAAGTTAATCATAGAAATCTATGCTTCTTGCTCACAGTGCAGTGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0053H21-RnoJv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U599920" ref_strand="+" ref_description="SGN-U599920 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>atataacaaacatgataagataatttgcaaaatattcccaaatggagccttgtacaaaatcttcaaggtaactacaatcaataggacatttaaagagaaaactggcgatacatattttcttgcatgtatcctacaaagaaagaaagaaaattttcaaaaagctttttttttcggccaaagtgttcaaaatccgtattggagcttcgatcgaatttgaattgcgctttgtaaaatccattcgaggggatgctcccaacaaaattttttttcatacttgagctcgaacataaaatctttagttaaggatgaaacactatgcaccacaacttaatattcaaaaaagaaaaaaaaattacccctacatttggtagttggtttactaactaatatcattatatatctatataattcttgccatcattcggattaagcttttttttgcctgttaacgaactctaaccaaaaaaccaaacttgaaagttgggata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0053H21-RnoJv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0053H21.1" temp_strand="-" temp_description="C02SLe0053H21.1  AC226516.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0053H21 sequenced_by:kribb upload_account_name:korea">
        <position start="113726" stop="112639"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="113426" g_stop="112942" g_length="485"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="485" r_length="485" r_score="0.973"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0053H21.1" gen_strand="-" ref_id="SGN-U599920" ref_strand="+">
        <total_alignment_score>0.973</total_alignment_score>
        <cumulative_length_of_scored_exons>485</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0053H21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U599920" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="113426" e_stop="112942"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATATAACAAACATGATAAGATAATTTGCAAAATATTCCCAAATGGAGCCTTGTACAAAATCTTCAAGGTAACTACAATCAATAGGACATATAAAGAGAAAACTGTCGATACATATTTTCTTGCATGTATCCTACAAAGAAAGAAAGAAAATATCCAAAAAGCTTTTTTTTTCGGCCAAAGTGTTCAAAATCCGTATTGGAGCTTCGATCGAATTTGAATTGCGCTTTGTAAGATCCATTCGAGGTGATGCTCCCAACAAAATTTTCTTTCATACTTGAGCTCGAACATAAAATCTCTAGTTAAGGATGAAACACTATGCACCACAACTTAATATACAAAAAAGAAAAAAAAATTACGCATACATTTGGTAGTTGGTTTACTAACTAATATCATTATATATCTATATAATTCTTGCCATCATTCGGATTAAGCTTCTTTTTGCCTGTTAACGAACTCTAACCAAAAAACCAAACTTGAAAGTTGTG</genome_strand>
        <mrna_strand>ATATAACAAACATGATAAGATAATTTGCAAAATATTCCCAAATGGAGCCTTGTACAAAATCTTCAAGGTAACTACAATCAATAGGACATTTAAAGAGAAAACTGGCGATACATATTTTCTTGCATGTATCCTACAAAGAAAGAAAGAAAATTTTCAAAAAGCTTTTTTTTTCGGCCAAAGTGTTCAAAATCCGTATTGGAGCTTCGATCGAATTTGAATTGCGCTTTGTAAAATCCATTCGAGGGGATGCTCCCAACAAAATTTTTTTTCATACTTGAGCTCGAACATAAAATCTTTAGTTAAGGATGAAACACTATGCACCACAACTTAATATTCAAAAAAGAAAAAAAAATTACCCCTACATTTGGTAGTTGGTTTACTAACTAATATCATTATATATCTATATAATTCTTGCCATCATTCGGATTAAGCTTTTTTTTGCCTGTTAACGAACTCTAACCAAAAAACCAAACTTGAAAGTTGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0053H21-RnoJv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U576761" ref_strand="+" ref_description="SGN-U576761 Tomato 200607#2 [36 ESTs aligned] (*GB) gi|147834799|emb|CAN75014.1| (e_value=4e-109) hypothetical; (*ATH) AT5G67370.1 (e_value=2e-107) | Symbol: None | expressed protein, similar to unknown protein (gb:AAC18972.1) | chr5:26894794-26896768 REVERSE | Aliases: K8K14.9, K8K14_9; (*SWP) sp|P51273|YCF36_PORPU (e_value=9e-29) Uncharacterized protein ycf36 OS=Porphyra purpurea GN=ycf36; ">
      <seq>ttggtatgactttaacttgatccaacctaaccttctaatttaagacttttatactcccttcattccaaaaataattttcgtctttttatcatcccaaattatttgtctaagtttaaaacaaaattaagttagtattgtttttcaaataggaatcagagagagcacaaaagaactcgtggaacaatgagaaatgaaggtaacagtggtgtgcaaggataatctttccacgttgcaacacaagttacccacgaatttgctttgagtaccacaaaaaatgcttcatatttatttacaatctataattcaagataatcctatgtaggagccacataagtggaccacaacgtttaaactggtggtcaaacacacacaatccaaaagagcagctctcagttggctgattctaattggacaaagataagaaattataaagatcgtcatttttgggggagataacagagaatattcaactactgataattttccatcacgtatgatgcatggtcaaaaaaaaaaaagaacttctatctagctactttttcttctgaattctatggttgcaagaaaattcacaaatgctaaggctaaatttatatggctccatagtttctagtccgatagaagtcaacaaaagctgccgctcgtggatcattttatcgaacaaagcaacgattgtatgtcggaggaacattcgagttaaagccctgaaagatgggatgaacggtggcacgaatggcagtggattaggtggtcgtagttgggacccaggcttggaaattgaggtgccatttgaacaaaggccggtgaatgagtactcatctctgaaagatgaaactttatactcttgggcagaactgggtccaggggccttcttcctacgtctcgggggactttggttagtcactttcgcagttttgggagtacctattgctgctgcaagcttcaatccttcaaaggatcctttaagatttctcctggctgcaagtacggggactctttttcttgttgcactgattgtcctaagaatttatctgggatggagctatgttggagataggcttttatcagcagttataccttatgaagagactggatggtatgatgggcagatgtgggtgaagcccccagagatcttagctcgggataggctgttgggatcttataaggtgaaaccagtcattaaaatgctgaagcaaacgctagttggaacaggggctttgcttgttgcagcagtctcattattcatatttgcaacaccagtagaagattttttccgcaatactttcacaacaaacgagaactcattgagttccacctcaacaaacagcacaaataaactaggcatcaggaaagaagaactgttgcgcttgccactggaagtcaaggaggacgatgatctagcaaaagctgccgctgaagcagctgatggaaggccagtttactgcagagataggtattatcgtgcattggccggtggacagtactgcaaatgggaagacttagttaaataagaggatatatataagtgaagaaagctacagttaaattctgtgattgctcaaaagatctgtacaattgagcctcttcttataattttaacgaagaaattttgatgttttatgcattagataatgggcatgcaaagaacaaaagaaagagaatcataccccc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0053H21-RnoJv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0053H21.1" temp_strand="-" temp_description="C02SLe0053H21.1  AC226516.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0053H21 sequenced_by:kribb upload_account_name:korea">
        <position start="121888" stop="117762"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="121589" g_stop="120787" g_length="803"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="803" r_length="803" r_score="0.998"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="120786" i_stop="120302" i_length="485">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.115" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="120301" g_stop="120149" g_length="153"/>
          <reference_exon_boundary r_type="cDNA" r_start="804" r_stop="956" r_length="153" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="120148" i_stop="119973" i_length="176">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.849" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="119972" g_stop="119895" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="957" r_stop="1034" r_length="78" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="119894" i_stop="119727" i_length="168">
            <donor d_prob="0.831" d_score="1.00"/>
            <acceptor a_prob="0.341" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="119726" g_stop="119631" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="1035" r_stop="1130" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="119630" i_stop="118792" i_length="839">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="118791" g_stop="118756" g_length="36"/>
          <reference_exon_boundary r_type="cDNA" r_start="1131" r_stop="1166" r_length="36" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="118755" i_stop="118643" i_length="113">
            <donor d_prob="0.959" d_score="0.00"/>
            <acceptor a_prob="0.334" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="118642" g_stop="118461" g_length="182"/>
          <reference_exon_boundary r_type="cDNA" r_start="1167" r_stop="1348" r_length="182" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="118460" i_stop="118384" i_length="77">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="118383" g_stop="118061" g_length="323"/>
          <reference_exon_boundary r_type="cDNA" r_start="1349" r_stop="1671" r_length="323" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0053H21.1" gen_strand="-" ref_id="SGN-U576761" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>1671</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0053H21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U576761" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="121589" e_stop="120787"/>
          <exon e_start="120301" e_stop="120149"/>
          <exon e_start="119972" e_stop="119895"/>
          <exon e_start="119726" e_stop="119631"/>
          <exon e_start="118791" e_stop="118756"/>
          <exon e_start="118642" e_stop="118461"/>
          <exon e_start="118383" e_stop="118061"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGGTATGACTTTAACTTGATCCAACCTAACCTTCTAATTTAAGACTTTTATACTCCCTTCATTCCAAAAATAATTTTCGTCTTTTTATCATCCCAAATTATTTGTCTAAGTTTAAAACAAAATTAAGTTAGTATTGTTTTTCAAATAGGAATCAGAGAGAGCACAAAAGAACTCGTGGAACAATGAGAAATGAAGGTAACAGTGGTGTGCAAGGATAATCTTTCCACGTTGCAACACAAGTTACCCACGAATTTGCTTTGAGTACCACAAAAAATGCTTCATATTTATTTACAATCTATAATTCAAGATAATCCTATGTAGGAGCCACATAAGTGGACCACAACGTTTAAACTGGTGGTCGAACACACACAATCCAAAAGAGCAGCTCTCAGTTGGCTGATTCTAATTGGACAAAGATAAGAAATTATAAAGATCGTCATTTTTGGGGGAGATAACAGAGAATATTCAACTACTGATAATTTTCCATCACGTATGATGCATGGTCAAAAAAAAAAAAGAACTTCTATCTAGCTACTTTTTCTTCTGAATTCTATGGTTGCAAGAAAATTCACAAATGCTAAGGCTAAATTTATATGGCTCCATAGTTTCTAGTCCGATAGAAGTCAACAAAAGCTGCCGCTCGTGGATCATTTTATCGAACAAAGCAACGATTGTATGTCGGAGGAACATTCGAGTTAAAGCCCTGAAAGATGGGATGAACGGTGGCACGAATGGCAGTGGATTAGGTGGTCGTAGTTGGGACCCAGGCTTGGAAATTGAGGTGCCATTTGAACAAAGGCCGGTATGTTCTCAATTCTTTGTATTCATTCCTGGCCTCATCCATTTGATCCAATCTGCAGAAATCAATAGAAAAGACTCATCTCAGTTCACATACTAGTTTAGATTTATACACTATTACTCTGATAGTGTAAAGATTTTATATGCTGTTCTTATTGTCCCACTTGTGATAGAACTTTTCTTTAGCTTAATCATAGAGATTGGTTTGCAATCTCCCTATAACTGACCTGGTTCTGTAAATATTCTTACACTCTCAGTGTAAAAAACTTAAAACTAGTCCTGAGAAGGCCACAAGATCTGCACAGATGAGACATGCCATTATACGATAAACTTCTAATGCAGGTTATAGGATTATTGAAATGATAAAACTGACTCAGTAAATTACTTTTCAACATGTACTAAATTTCTGAAGTTCCATAAGGACGGAGGACTTGATATGGAGATGGGTGAGCAATTTAAAGTATTAACTAAGCTAGTGCTTTTTACCAGGTGAATGAGTACTCATCTCTGAAAGATGAAACTTTATACTCTTGGGCAGAACTGGGTCCAGGGGCCTTCTTCCTACGTCTCGGGGGACTTTGGTTAGTCACTTTCGCAGTTTTGGGAGTACCTATTGCTGCTGCAAGCTTCAATCCTTCAAAGGTAAATTGTTAACTTTGTGCAAGTTCTTTCTCTCAGGAGAGTTCCAAAGTGATTACTCAAGTGTCAATAGTAAACAAAGAGCTTTCGTTTTCTTTCTTCATTTATTTCTAAGTCAAAAATAAAATCAAAGAATCCTCACAATCATTGACATTCAATTTTTCATAATCCTCCTGCAGGATCCTTTAAGATTTCTCCTGGCTGCAAGTACGGGGACTCTTTTTCTTGTTGCACTGATTGTCCTAAGAATTTATCTGGTAAAGTTCTTCAATTGCAGGACTTCAATTTTTTGGTCAAATCATTTAGATCACATTCAATCAATGACCATAATAGGGATAGGAGCTCCGCTGGAGATAGATAATTTGAGAACTTAACTTCTCTAATATTCTACGTAACATTCTAATTCCTGACAATGACCACAATAGGGATGGAGCTATGTTGGAGATAGGCTTTTATCAGCAGTTATACCTTATGAAGAGACTGGATGGTATGATGGGCAGATGTGGGTGAAGCCCCCAGAGGTTAGTGGTCTTTCCTTTGCATACTTATTTAACAGGTTCTTTCTCTTTGCTTCCTCTGTTCCTCCTCATTCCCACAGTAGGAAAATATTGCCAGCTTCAAAATGGATAAATTAGCTTCAATCCAGTTCACTAAAATAGGTCATTTATACTAGTTACATCAAGCACATCTAAGTAAAGTAAGTCAAGTTGAACTCTTTTGTTAAAAAAAGAAGGTTAACAATATGAACTTTAATCATTGACAAACTGAATCTAACAAGTGCTCATGGATATGAAGAATACATAGCTAGCAACAAGGGGGAAATGGTGTAATATTGCTTGACAAGAATTGTATCACATAATAGATAAGAGCAAGCGCCCAGAGCCCTAACGACTAACAGTGAGGTGAAAATGGTCCAATATAGCATGAAATGGACTTAAAATTTGGTATCACAAATAAAACGCGGGAAATGAAGCTACATGTGAAAGCAATAAGTTGTACTTCCTTGTGTTGGTTAAATCATCAGTCCTTGCACAATACCCTTTTCTTCTTAGCACAAACAGCTATACTAAAGATTTCAATAAAATAGGTTCTTACTTTTCATGGTATAGAAATGTAGTTATCTTTCCGTGAAACTTTGAGCAACAGATCTTCTAGAAAGTAATAGCATTATCTTTTACAATAACACTACATGATGGAACAACGTCTATACATGAAGCTAATATTAGTTCCGCACTTGTAATAATTCATGCTCTAAAAGTCTATAGCCACCTGCACTTCTTGAAAAATTTATCAGAATCCAAGCTCTAAAAGTCTGTAATGATGTTGCACGTATGACATTTAATGTGATTATTCCTTGCAGATCTTAGCTCGGGATAGGCTGTTGGGATCTTATAAGGTACCAGATTGATCTATAAAATTCATCAGCTGGTTACATCATATTCTAACTGTCAATAGAGTAGATCTTTCCTATTACGAGCTTGACAAAGCTGAAAGAATTTATTTACCTAGGTGAAACCAGTCATTAAAATGCTGAAGCAAACGCTAGTTGGAACAGGGGCTTTGCTTGTTGCAGCAGTCTCATTATTCATATTTGCAACACCAGTAGAAGATTTTTTCCGCAATACTTTCACAACAAACGAGAACTCATTGAGTTCCACCTCAACAAACAGCACAAATAAACTAGGCATCAGGTAATTCTATTGAAAACTTAAGAAGTACAATACTATAAAATTTCATGAGCTTACGTTGTTTCGCTATGTAATTAAAGGAAAGAAGAACTGTTGCGCTTGCCACTGGAAGTCAAGGAGGACGATGATCTAGCAAAAGCTGCCGCTGAAGCAGCTGATGGAAGGCCAGTTTACTGCAGAGATAGGTATTATCGTGCATTGGCCGGTGGACAGTACTGCAAATGGGAAGACTTAGTTAAATAAGAGGATATATATAAGTGAAGAAAGCTACAGTTAAATTCTGTGATTGCTCAAAAGATCTGTACAATTGAGCCTCTTCTTATAATTTTAACGAAGAAATTTTGATGTTTTATGCATTAGATAATGCGCATGCAAAGAACAAAAGAAAGAGAATCATAACCCA</genome_strand>
        <mrna_strand>TTGGTATGACTTTAACTTGATCCAACCTAACCTTCTAATTTAAGACTTTTATACTCCCTTCATTCCAAAAATAATTTTCGTCTTTTTATCATCCCAAATTATTTGTCTAAGTTTAAAACAAAATTAAGTTAGTATTGTTTTTCAAATAGGAATCAGAGAGAGCACAAAAGAACTCGTGGAACAATGAGAAATGAAGGTAACAGTGGTGTGCAAGGATAATCTTTCCACGTTGCAACACAAGTTACCCACGAATTTGCTTTGAGTACCACAAAAAATGCTTCATATTTATTTACAATCTATAATTCAAGATAATCCTATGTAGGAGCCACATAAGTGGACCACAACGTTTAAACTGGTGGTCAAACACACACAATCCAAAAGAGCAGCTCTCAGTTGGCTGATTCTAATTGGACAAAGATAAGAAATTATAAAGATCGTCATTTTTGGGGGAGATAACAGAGAATATTCAACTACTGATAATTTTCCATCACGTATGATGCATGGTCAAAAAAAAAAAAGAACTTCTATCTAGCTACTTTTTCTTCTGAATTCTATGGTTGCAAGAAAATTCACAAATGCTAAGGCTAAATTTATATGGCTCCATAGTTTCTAGTCCGATAGAAGTCAACAAAAGCTGCCGCTCGTGGATCATTTTATCGAACAAAGCAACGATTGTATGTCGGAGGAACATTCGAGTTAAAGCCCTGAAAGATGGGATGAACGGTGGCACGAATGGCAGTGGATTAGGTGGTCGTAGTTGGGACCCAGGCTTGGAAATTGAGGTGCCATTTGAACAAAGGCCG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAATGAGTACTCATCTCTGAAAGATGAAACTTTATACTCTTGGGCAGAACTGGGTCCAGGGGCCTTCTTCCTACGTCTCGGGGGACTTTGGTTAGTCACTTTCGCAGTTTTGGGAGTACCTATTGCTGCTGCAAGCTTCAATCCTTCAAAG................................................................................................................................................................................GATCCTTTAAGATTTCTCCTGGCTGCAAGTACGGGGACTCTTTTTCTTGTTGCACTGATTGTCCTAAGAATTTATCTG........................................................................................................................................................................GGATGGAGCTATGTTGGAGATAGGCTTTTATCAGCAGTTATACCTTATGAAGAGACTGGATGGTATGATGGGCAGATGTGGGTGAAGCCCCCAGAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTTAGCTCGGGATAGGCTGTTGGGATCTTATAAG.................................................................................................................GTGAAACCAGTCATTAAAATGCTGAAGCAAACGCTAGTTGGAACAGGGGCTTTGCTTGTTGCAGCAGTCTCATTATTCATATTTGCAACACCAGTAGAAGATTTTTTCCGCAATACTTTCACAACAAACGAGAACTCATTGAGTTCCACCTCAACAAACAGCACAAATAAACTAGGCATCAG.............................................................................GAAAGAAGAACTGTTGCGCTTGCCACTGGAAGTCAAGGAGGACGATGATCTAGCAAAAGCTGCCGCTGAAGCAGCTGATGGAAGGCCAGTTTACTGCAGAGATAGGTATTATCGTGCATTGGCCGGTGGACAGTACTGCAAATGGGAAGACTTAGTTAAATAAGAGGATATATATAAGTGAAGAAAGCTACAGTTAAATTCTGTGATTGCTCAAAAGATCTGTACAATTGAGCCTCTTCTTATAATTTTAACGAAGAAATTTTGATGTTTTATGCATTAGATAATGGGCATGCAAAGAACAAAAGAAAGAGAATCATACCCCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0053H21-RnoJv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U590671" ref_strand="+" ref_description="SGN-U590671 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|40809925|dbj|BAD07294.1| (e_value=2e-54) prolyl 4-hydroxylase [Nicotiana tabacum]; (*ATH) AT4G33910.1 (e_value=2e-44)  Symbol: None | oxidoreductase, 2OG-Fe(II) oxygenase family protein, similar to prolyl 4-hydroxylase, alpha subunit, from Gallus gallus (GI:212530), Rattus norvegicus (GI:474940), Drosophila melanogaster (GI:4336512); contains PF03171 2OG-Fe(II) oxyg... ; ">
      <seq>tcagcaaaaaagagaaaaaaattcccgccgggtgcagaagtcaaagaatcgtacacatgcaaaccatcagtctgtcattaaatagtgcactgaaattatcattctcaaacttaaaccaatcggattcgccatcaggaagaagatgaagagcaaaggtagattagtgggacaaagatggcggagcatagggggcttaccttcaatatttctgctatgtcttttcttgttcttcgccggtttattcggttctactctcgtttctcatcaggatgtacaactacttactgtacggcctaggtcaagggtgcttaaatctgtggaagaatttgatgttttgcctaatggcgacactggagaacactcccttacttccatccccttccaggtcttaagctggttcccacgtgcattatactttcccaatttcgcaactacagaacaatgccaaggcataattaagatggcaaaggcagaactgaaaccatcatctttggctctccgcaaaggagaaacagcagaaaataccaaaggagttagaacaagttctggtatgtttatcagtgcatctgaagacaaaactggaattctggacctcattgaggagaaaatcgcnnggcgactatgatccccaggacacacggagaggcatttaangttttgcggtacgaaataggccananttattattcaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0053H21-RnoJv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0053H21.1" temp_strand="+" temp_description="C02SLe0053H21.1  AC226516.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0053H21 sequenced_by:kribb upload_account_name:korea">
        <position start="126376" stop="130180"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="126676" g_stop="126943" g_length="268"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="268" r_length="268" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="126944" i_stop="127013" i_length="70">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.637" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="127014" g_stop="127130" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="269" r_stop="385" r_length="117" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="127131" i_stop="128017" i_length="887">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.949" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="128018" g_stop="128175" g_length="158"/>
          <reference_exon_boundary r_type="cDNA" r_start="386" r_stop="543" r_length="158" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="128176" i_stop="128539" i_length="364">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.967" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="128540" g_stop="128642" g_length="103"/>
          <reference_exon_boundary r_type="cDNA" r_start="544" r_stop="645" r_length="102" r_score="0.971"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="128643" i_stop="129833" i_length="1191">
            <donor d_prob="0.952" d_score="0.94"/>
            <acceptor a_prob="0.968" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="129834" g_stop="129880" g_length="47"/>
          <reference_exon_boundary r_type="cDNA" r_start="646" r_stop="692" r_length="47" r_score="0.936"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0053H21.1" gen_strand="+" ref_id="SGN-U590671" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>693</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0053H21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U590671" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="126676" e_stop="126943"/>
          <exon e_start="127014" e_stop="127130"/>
          <exon e_start="128018" e_stop="128175"/>
          <exon e_start="128540" e_stop="128642"/>
          <exon e_start="129834" e_stop="129880"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAGCAAAAAAGAGAAAAAAATTCCCGCCGGGTGCAGAAGTCAAAGAATCGTACACATGCAAACCATCAGTCTGTCATTAAATAGTGCACTGAAATTATCATTCTCAAACTTAAACCAATCGGATTCGCCATCAGGAAGAAGATGAAGAGCAAAGGTAGATTAGTGGGACAAAGATGGCGGAGCATAGGGGGCTTACCTTCAATATTTCTGCTATGTCTTTTCTTGTTCTTCGCCGGTTTATTCGGTTCTACTCTCGTTTCTCATCAGGTATTTCCCTTATTATTTGCTAGACGCCTCTGTCATATGCGTTTCTAATCAAAGTGTTTGGGTGTGATAGGATGTACAACTACTTACTGTACGGCCTAGGTCAAGGGTGCTTAAATCTGTGGAAGAATTTGATGTTTTGCCTAATGGCGACACTGGAGAACACTCCCTTACTTCCATCCCCTTCCAGGTATATTTCATTGCTCAGTTCTCCTTGCTGAATTAGCGCTGGTTCGATTTCAAGTCTAACCGTTTTTGTTTGAAAAATTGTTCATACTGTAGTTGAACTTACATTAGTCCGCCAAGCTTTTTAATTATTGTTTCGATGTTCTCCTGGATTTGCACTTTTGGTTGGTTGATATGCGGATTTTCTCATAGCTATTTTATTTTGATTATCAACCGTTGAGATTGTTGCCGCTGATGCAATAATATTACTTTTCTTAATGTTGAAGTAGCATAACTTGATTTTTTCGGTAAGTAAACCAGATAGATAATGGCACAGCCCATTTGAATTGGTTTAAAAGTCGAGCAAATTACTTATCAATTTTTGACAAAAATAAAAAATAATTTAAAATAACTGAAATTGACTTAAAATAAATCAAAAATGACTTGAAATAAGTGAAAAATAAATTAAGATAGGTCTTCCTTGCTTTTTATTTTTTTAACTTGTTAAGTCATTTCCGTTTGACTTTTTAATTTCAACTTAAATAACTATTTTTGTAAGCCAATTCAAACGTGTTCTAAGTAAGTTTAAGAACAAATATGCATACTCTAATTTCTCTTATTCTGCCACTTCATCTACACTTTCTGCTTATATTTCTATGATTCCTGTTTTTCTATGGTTGACTGGGGGAAGATTTGTGTGGAGGAAGCAGTGAAGTAGGCATGTCATTAAGTCTATAGGCAAAATAGCTGGTAGCTGTGACTGATCATGTTAGCTTCCTAAACATAAACCTAAGCTGGTAAAAATTTTGTTCATGGTACTCATTGACTATAAAGTCTAGTATCTCTGATTTGCATTAGTATTCATTTGTTTTGGTTTATCTTATTTGACATCGACTTCAATCTTTTGGGTAGGTCTTAAGCTGGTTCCCACGTGCATTATACTTTCCCAATTTCGCAACTACAGAACAATGCCAAGGCATAATTAAGATGGCAAAGGCAGAACTGAAACCATCATCTTTGGCTCTCCGCAAAGGAGAAACAGCAGAAAATACCAAAGGAGTTAGAACAAGGTAAACAATACTCTGGTGTTCTATGTGTCCTGACTGATGTTTTGTCATAAATGCAATCTTTTCACTCTTTCCAAGCATTAGATTTAACTCTTAATACACTCATACTTCCATAATATCTATTTCTAGTAGACAAGATAAATATGTCACCAAAATTGAGTGTGTTCACATACATTTTCTACTTTTTTGGAAGATAAAATTGTTCATGGTGTTTGAACTGGCCATATGTCTCTGTCCTTTTTCAGGTCATTTGTTTTATATTTCTTTGATCTGTTGTCAAGACTATTTGATAAAAGTTTGCTGCCTCTTTTGGTTTTGACATGAAGTTACAATTTGAATGACTTTTGCTTTTCCCCCTTTCCCACAGTTCTGGTATGTTTATCAGTGCATCTGAAGACAAAACTGGAATTCTGGACCTCATTGAGGAGAAAATCGCAAAGGCGACTATGATCCCCAGGACACACGGAGAGGTGAATTTCATTTAAAACACACATCTTAAATATGACGCATGAAGTGGTTCTTACTGTGTATTAGTTTTATCATTCCATCCACACCTCAGAAATTGGATCTCAATAGAGGACATAATAGTTGTATTATTGGTGGGGAATCATTTTCCCAAGCTTCTTCATTTCCTTCCTCTTCTTCATCTTCTATTTTCTTGAAAACTATGTTGATTCAAGCTCTGGTTCTACTTCTACAAAATGCTGGACAACTATATTAGTGATTTTAGGTTTCCACTAGCAAATGCATTCTTCCAATTGTTATCAACACTGAAGAAAACAAGTCTTTTGGTGTTGGAGGTAAATATTAACTGGTTGTACAATCACATTTTTTTTTACCAGATTTAAGGCCATATATGTCAAACACCAAACATATTTTGGTCTTCGTGTTCTTTTCACCTCATATCTGAAAATTTAAATGGGTATCTGCTGCGGAAAGATGGAATTGGTCTGCTTTTGTTTTTGGACAGATCAGTATGTGTTAGCAATGGCAAGATTAAATTGACACTACAATGATCATTGAATGGAAATGATATGATTATTTTTTGTCCGAATCATTCATACCGTACCAATATAGATTTTTGTCAAAGGTTTCACATGGAAATTTAACTTGAAAATCCTATATATATTTCCATTTGAAAGCTTTTTGTTCCAATTTTACTTATGCAAAAGAGCTCATTCGATGTAATTGACGGTTCGTTTCCTCTTCTATATGAACTATCCAGCTGTCACATGGTCTAGTCTGTATGTATTCTAACAAGAGACCATGACAAAACAATGAGGCAACAGATCAAGGTGTGCATTTTAACAGGAAGTTAGAGAACTGAACATCTCTTGCTGCTGTATACTTTAATTTATAGTTGGGGATATCTGGCTTTTGAGTATTATCTGAAACTGGAGTTCTTTTGCTGGATTCCCGGATATTTGTTCGATTTCGTCCTAGAATTGAGTCAAATGTGATGATGCAAATAATTCTTGCTATGTACATTATGCATCTGATAAATAATAGGTAGTCAGGCTGTAACCCCTTTGTGTCTGGACTTTCTCTTATTTTCATATAGTGATTCTGAATGATTTTTCTGTTAATGAAAGCTCCAAGTATGGTGTACAGTGATCATAATTGCTGTTTAACTTGAATCAGTTGACCTGTGCGTTTTTCAGGCATTTAATGTTTTGCGGTACGAAATAGGCCAGAGTTATTATTCACA</genome_strand>
        <mrna_strand>TCAGCAAAAAAGAGAAAAAAATTCCCGCCGGGTGCAGAAGTCAAAGAATCGTACACATGCAAACCATCAGTCTGTCATTAAATAGTGCACTGAAATTATCATTCTCAAACTTAAACCAATCGGATTCGCCATCAGGAAGAAGATGAAGAGCAAAGGTAGATTAGTGGGACAAAGATGGCGGAGCATAGGGGGCTTACCTTCAATATTTCTGCTATGTCTTTTCTTGTTCTTCGCCGGTTTATTCGGTTCTACTCTCGTTTCTCATCAG......................................................................GATGTACAACTACTTACTGTACGGCCTAGGTCAAGGGTGCTTAAATCTGTGGAAGAATTTGATGTTTTGCCTAATGGCGACACTGGAGAACACTCCCTTACTTCCATCCCCTTCCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTTAAGCTGGTTCCCACGTGCATTATACTTTCCCAATTTCGCAACTACAGAACAATGCCAAGGCATAATTAAGATGGCAAAGGCAGAACTGAAACCATCATCTTTGGCTCTCCGCAAAGGAGAAACAGCAGAAAATACCAAAGGAGTTAGAACAAG............................................................................................................................................................................................................................................................................................................................................................................TTCTGGTATGTTTATCAGTGCATCTGAAGACAAAACTGGAATTCTGGACCTCATTGAGGAGAAAATCGC-NNGGCGACTATGATCCCCAGGACACACGGAGAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATTTAANGTTTTGCGGTACGAAATAGGCCANANTTATTATTCACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0053H21-RnoJv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U578386" ref_strand="+" ref_description="SGN-U578386 Tomato 200607#2 [8 ESTs aligned] (*GB) gi|40809925|dbj|BAD07294.1| (e_value=3e-116) prolyl 4-hydroxylase [Nicotiana tabacum]; (*ATH) AT4G33910.1 (e_value=9e-103)  Symbol: None | oxidoreductase, 2OG-Fe(II) oxygenase family protein, similar to prolyl 4-hydroxylase, alpha subunit, from Gallus gallus (GI:212530), Rattus norvegicus (GI:474940), Drosophila melanogaster (GI:4336512); contains PF03171 2OG-Fe(II) oxyg... ; (*SWP) sp|Q9NXG6|EGLX_HUMAN (e_value=8e-12) Putative HIF-prolyl hydroxylase PH-4 OS=Homo sapiens GN=PH4; ">
      <seq>aattcccgccgggtgcagaagtcaaagaatcgtacacatgcaaaccatcagtctgtcattaaatagtgcactgaaattatcattctcaaacttaaaccaatcggattcgccatcaggaagaagatgaagagcaaaggtagattagtgggacaaagatggcggagcatagggggcttaccttcaatatttctgctatgtcttttcttgttcttcgccggtttattcggttctactctcgtttctcatcaggatgtacaactacttactgtacggcctaggtcaagggtgcttaaatctgtggaagaatttgatgttttgcctaatggcgacactggagaacactcccttacttccatccccttccaggtcttaagctggttcccacgtgcattatactttcccaatttcgcaactacagaacaatgccaaggcataattaagatggcaaaggcagaactgaaaccatcatctttggctctccgcaaaggagaaacagcagaaaataccaaaggagttagaacaagttctggtatgtttatcagtgcatctgaagacaaaactggaattctggacctcattgaggagaaaatcgcaaaggcgactatgatccccaggacacacggagaggcatttaatgttttgcggtacgaaataggccagagttattattcacattatgatgcgtttgatccttctcaatatggtcctcagaagagccaaagggttgcatccctttttgttatatttatctgatgtggaagaaggtggagaaaccatgttccctttcgagaatgcacagaatatggatgttaattatgacttccgcaagtgtattggtctgaaagtgaagccgcgtagaggggatggactactattttactcgctgtttccaaatggtacaattgatccgacatctcttcacgggagctgtgcagtaatccgaggtgaaaaatgggttgccacaaagtggatcagggatcaagaaatggatgaataaacgagtacatgtctggaagtggtgttaatataattctttcgtaatttaatgtagccactcactggaacctttgagcgaattttacagtaaatatatctagtgtttgttcatattgatctgtgtcagttaacccttaatacgttacttgagtcttggttgctcccattacccacaaagctcaccccatcttgcagtaaaaaagaagtctaattgtaatgaccgtgcgaatgttttgtaataggatcagatcacgtgtttcaaaagtgttgtactaacacaaatattattatgacgctaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0053H21-RnoJv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0053H21.1" temp_strand="+" temp_description="C02SLe0053H21.1  AC226516.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0053H21 sequenced_by:kribb upload_account_name:korea">
        <position start="126395" stop="132337"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="126695" g_stop="126943" g_length="249"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="249" r_length="249" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="126944" i_stop="127013" i_length="70">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.637" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="127014" g_stop="127130" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="250" r_stop="366" r_length="117" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="127131" i_stop="128017" i_length="887">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.949" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="128018" g_stop="128175" g_length="158"/>
          <reference_exon_boundary r_type="cDNA" r_start="367" r_stop="524" r_length="158" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="128176" i_stop="128539" i_length="364">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.967" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="128540" g_stop="128642" g_length="103"/>
          <reference_exon_boundary r_type="cDNA" r_start="525" r_stop="627" r_length="103" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="128643" i_stop="129833" i_length="1191">
            <donor d_prob="0.952" d_score="1.00"/>
            <acceptor a_prob="0.968" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="129834" g_stop="129929" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="628" r_stop="723" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="129930" i_stop="130546" i_length="617">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.383" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="130547" g_stop="130612" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="724" r_stop="790" r_length="67" r_score="0.970"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="130613" i_stop="130701" i_length="89">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.942" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="130702" g_stop="130821" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="791" r_stop="910" r_length="120" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="130822" i_stop="131646" i_length="825">
            <donor d_prob="0.879" d_score="1.00"/>
            <acceptor a_prob="0.890" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="131647" g_stop="132037" g_length="391"/>
          <reference_exon_boundary r_type="cDNA" r_start="911" r_stop="1301" r_length="391" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0053H21.1" gen_strand="+" ref_id="SGN-U578386" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>1300</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0053H21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U578386" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="126695" e_stop="126943"/>
          <exon e_start="127014" e_stop="127130"/>
          <exon e_start="128018" e_stop="128175"/>
          <exon e_start="128540" e_stop="128642"/>
          <exon e_start="129834" e_stop="129929"/>
          <exon e_start="130547" e_stop="130612"/>
          <exon e_start="130702" e_stop="130821"/>
          <exon e_start="131647" e_stop="132037"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTCCCGCCGGGTGCAGAAGTCAAAGAATCGTACACATGCAAACCATCAGTCTGTCATTAAATAGTGCACTGAAATTATCATTCTCAAACTTAAACCAATCGGATTCGCCATCAGGAAGAAGATGAAGAGCAAAGGTAGATTAGTGGGACAAAGATGGCGGAGCATAGGGGGCTTACCTTCAATATTTCTGCTATGTCTTTTCTTGTTCTTCGCCGGTTTATTCGGTTCTACTCTCGTTTCTCATCAGGTATTTCCCTTATTATTTGCTAGACGCCTCTGTCATATGCGTTTCTAATCAAAGTGTTTGGGTGTGATAGGATGTACAACTACTTACTGTACGGCCTAGGTCAAGGGTGCTTAAATCTGTGGAAGAATTTGATGTTTTGCCTAATGGCGACACTGGAGAACACTCCCTTACTTCCATCCCCTTCCAGGTATATTTCATTGCTCAGTTCTCCTTGCTGAATTAGCGCTGGTTCGATTTCAAGTCTAACCGTTTTTGTTTGAAAAATTGTTCATACTGTAGTTGAACTTACATTAGTCCGCCAAGCTTTTTAATTATTGTTTCGATGTTCTCCTGGATTTGCACTTTTGGTTGGTTGATATGCGGATTTTCTCATAGCTATTTTATTTTGATTATCAACCGTTGAGATTGTTGCCGCTGATGCAATAATATTACTTTTCTTAATGTTGAAGTAGCATAACTTGATTTTTTCGGTAAGTAAACCAGATAGATAATGGCACAGCCCATTTGAATTGGTTTAAAAGTCGAGCAAATTACTTATCAATTTTTGACAAAAATAAAAAATAATTTAAAATAACTGAAATTGACTTAAAATAAATCAAAAATGACTTGAAATAAGTGAAAAATAAATTAAGATAGGTCTTCCTTGCTTTTTATTTTTTTAACTTGTTAAGTCATTTCCGTTTGACTTTTTAATTTCAACTTAAATAACTATTTTTGTAAGCCAATTCAAACGTGTTCTAAGTAAGTTTAAGAACAAATATGCATACTCTAATTTCTCTTATTCTGCCACTTCATCTACACTTTCTGCTTATATTTCTATGATTCCTGTTTTTCTATGGTTGACTGGGGGAAGATTTGTGTGGAGGAAGCAGTGAAGTAGGCATGTCATTAAGTCTATAGGCAAAATAGCTGGTAGCTGTGACTGATCATGTTAGCTTCCTAAACATAAACCTAAGCTGGTAAAAATTTTGTTCATGGTACTCATTGACTATAAAGTCTAGTATCTCTGATTTGCATTAGTATTCATTTGTTTTGGTTTATCTTATTTGACATCGACTTCAATCTTTTGGGTAGGTCTTAAGCTGGTTCCCACGTGCATTATACTTTCCCAATTTCGCAACTACAGAACAATGCCAAGGCATAATTAAGATGGCAAAGGCAGAACTGAAACCATCATCTTTGGCTCTCCGCAAAGGAGAAACAGCAGAAAATACCAAAGGAGTTAGAACAAGGTAAACAATACTCTGGTGTTCTATGTGTCCTGACTGATGTTTTGTCATAAATGCAATCTTTTCACTCTTTCCAAGCATTAGATTTAACTCTTAATACACTCATACTTCCATAATATCTATTTCTAGTAGACAAGATAAATATGTCACCAAAATTGAGTGTGTTCACATACATTTTCTACTTTTTTGGAAGATAAAATTGTTCATGGTGTTTGAACTGGCCATATGTCTCTGTCCTTTTTCAGGTCATTTGTTTTATATTTCTTTGATCTGTTGTCAAGACTATTTGATAAAAGTTTGCTGCCTCTTTTGGTTTTGACATGAAGTTACAATTTGAATGACTTTTGCTTTTCCCCCTTTCCCACAGTTCTGGTATGTTTATCAGTGCATCTGAAGACAAAACTGGAATTCTGGACCTCATTGAGGAGAAAATCGCAAAGGCGACTATGATCCCCAGGACACACGGAGAGGTGAATTTCATTTAAAACACACATCTTAAATATGACGCATGAAGTGGTTCTTACTGTGTATTAGTTTTATCATTCCATCCACACCTCAGAAATTGGATCTCAATAGAGGACATAATAGTTGTATTATTGGTGGGGAATCATTTTCCCAAGCTTCTTCATTTCCTTCCTCTTCTTCATCTTCTATTTTCTTGAAAACTATGTTGATTCAAGCTCTGGTTCTACTTCTACAAAATGCTGGACAACTATATTAGTGATTTTAGGTTTCCACTAGCAAATGCATTCTTCCAATTGTTATCAACACTGAAGAAAACAAGTCTTTTGGTGTTGGAGGTAAATATTAACTGGTTGTACAATCACATTTTTTTTTACCAGATTTAAGGCCATATATGTCAAACACCAAACATATTTTGGTCTTCGTGTTCTTTTCACCTCATATCTGAAAATTTAAATGGGTATCTGCTGCGGAAAGATGGAATTGGTCTGCTTTTGTTTTTGGACAGATCAGTATGTGTTAGCAATGGCAAGATTAAATTGACACTACAATGATCATTGAATGGAAATGATATGATTATTTTTTGTCCGAATCATTCATACCGTACCAATATAGATTTTTGTCAAAGGTTTCACATGGAAATTTAACTTGAAAATCCTATATATATTTCCATTTGAAAGCTTTTTGTTCCAATTTTACTTATGCAAAAGAGCTCATTCGATGTAATTGACGGTTCGTTTCCTCTTCTATATGAACTATCCAGCTGTCACATGGTCTAGTCTGTATGTATTCTAACAAGAGACCATGACAAAACAATGAGGCAACAGATCAAGGTGTGCATTTTAACAGGAAGTTAGAGAACTGAACATCTCTTGCTGCTGTATACTTTAATTTATAGTTGGGGATATCTGGCTTTTGAGTATTATCTGAAACTGGAGTTCTTTTGCTGGATTCCCGGATATTTGTTCGATTTCGTCCTAGAATTGAGTCAAATGTGATGATGCAAATAATTCTTGCTATGTACATTATGCATCTGATAAATAATAGGTAGTCAGGCTGTAACCCCTTTGTGTCTGGACTTTCTCTTATTTTCATATAGTGATTCTGAATGATTTTTCTGTTAATGAAAGCTCCAAGTATGGTGTACAGTGATCATAATTGCTGTTTAACTTGAATCAGTTGACCTGTGCGTTTTTCAGGCATTTAATGTTTTGCGGTACGAAATAGGCCAGAGTTATTATTCACATTATGATGCGTTTGATCCTTCTCAATATGGTCCTCAGAAGAGCCAAAGGGTATGCACTATCTACTTGGGTAAATTGTTGCTGTTAACTTTTCCAATTGACTTCTTAAATTTTTTACTAGCTCAATTCTTGCACAAACTAGCATAATGAATGGTGCATGGATTTGAGTGTTTGGTTATTGGGATAAGATGGTGTTGTTTTTCATATGCATGTTTCTTCCAATCCTCCTCCATCAAAAATATTTTTAGAATGGGGAAAATAAAGTTTGTTTGAAGCTATGGTTCATAAGACACTAGTTTGCAGATCCATTTCAATGACTTAATTTATACATGGAATCACCAATGGTGTGTTATCTGGATCACCACAAGGTGTATACAGCATTTCTTCCATTTAGAACTTTGTGGAACCCACATTAGTTTTATCCTTAATAAGCATATAGTTTTATCCGTTATATACATCTCTTTTTCTTTTATTTTCGCCCCTTTTGATGAAAAAGTTCTGTTTTTTGTCATCGATCCTTACATAACCATCATTTGTGGAGTGTTTAGAGCAAGTGTGCCATAGACTATAACTATGAAATTTGACATTTCATAATAGCTCAAATTGCAGTTAATTTTGAGTAATGATTATTTTCAGGGCCAGTCTAAAAATAATGTATTTTCATTTAGGTTGCAT-CCTTTTTGTTATATTTATCTGATGTGGAAGAAGGTGGAGAAACCATGTTCCCTTTCGAGGTGAGTTCAAAGTTGTTTCTTCTTTCGTGGACTATTATTATATTTCTGCCTCTCATGTCGTGTAAATAAGTCCTTTGGTTAATTTACAGAATGCACAGAATATGGATGTTAATTATGACTTCCGCAAGTGTATTGGTCTGAAAGTGAAGCCGCGTAGAGGGGATGGACTACTATTTTACTCGCTGTTTCCAAATGGTACAATTGATCCGGTGAGTATTTGCTTGTAGATTTTAGTGTGATCGCCGTATTTCTTTGCATACAAAAGAAGTCTGATCCTTGGGGGGTAGGCCATCATCTACCGGAGCCATGTGCCTAGTCTCGAGGATCTCTGTTATTTTAACAAGGGTTGGTCATAACAGCTATGCAGCAAGCCAAGCATATTGTGAACCATTTATGACCTTATACTTTATAGCAGATGAATAGTATAAAGTGGATTTATATGATGCTGTTATGAAAATTTGTTACAAATGAGATTATCAGCAATAGGTTTGTTGGAACAGAAGACAAACTTTCTGTGCTCTTTTGCAGCGCGGTATACCATCATGCGCAGAGCTGTGATTCTTTTAGGATTTTAAAGCATTAGGAGTTGCCCACAGAATTAAAGATGATAAAGTTAAAGAAATGCCTACATCTTTCCAATGTCTTATTTGCTTTTGGTTTTGTTCTTTTTGTTTGTTTTGCTGTGTGTTTTCTTATTTCCTTTCTGCGGGAACCGTTCTTGATCAATCTGTCTACCATGATGCTATGGAGATGTTTGCTGAAGAGTCGCTATGGTGCTGCTAAAATCATTTTTGCTGATTGTGATTTATCAGTGTGAATGGTAGCGCATATTAGGTACCACCCCATCGAACAGATACTGATGGGAAAGGTTATAATATTGGTTCCCGTATGGCCTGTTTCACTGTTTCATTTTCTGTTGCTGATTCATCTCCTCTGGCTACTACTGGTTATAAAGCTGAATACTGATTACCAACATTATATCAGACTGCTCATGTTGGCTTGCAGTTACTCACATTTGTAAATCTCTTATGTAGACATCTCTTCACGGGAGCTGTGCAGTAATCCGAGGTGAAAAATGGGTTGCCACAAAGTGGATCAGGGATCAAGAAATGGATGAATAAACGAGTACATGTCTGGAAGTGGTGTTAATATAATTCTTTCGTAATTTAATGTAGCCACTCACTGGAACCTTTGAGCGAATTTTACAGTAAATATATCTAGTGTTTGTTCATATTGATCTGTGTCAGTTAACCCTTAATACGTTACTTGAGTCTTGGTTGCTCCCATTACCCACAAAGCTCACCCCATCTTGCAGTAAAAAAGAAGTCTAATTGTAATGACCGTGCGAATGTTTTGTAATAGGATCAGATCACGTGTTTCAAAAGTGTTGTACTAACACAAATATTATTATGACGCTAAAAAGAA</genome_strand>
        <mrna_strand>AATTCCCGCCGGGTGCAGAAGTCAAAGAATCGTACACATGCAAACCATCAGTCTGTCATTAAATAGTGCACTGAAATTATCATTCTCAAACTTAAACCAATCGGATTCGCCATCAGGAAGAAGATGAAGAGCAAAGGTAGATTAGTGGGACAAAGATGGCGGAGCATAGGGGGCTTACCTTCAATATTTCTGCTATGTCTTTTCTTGTTCTTCGCCGGTTTATTCGGTTCTACTCTCGTTTCTCATCAG......................................................................GATGTACAACTACTTACTGTACGGCCTAGGTCAAGGGTGCTTAAATCTGTGGAAGAATTTGATGTTTTGCCTAATGGCGACACTGGAGAACACTCCCTTACTTCCATCCCCTTCCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTTAAGCTGGTTCCCACGTGCATTATACTTTCCCAATTTCGCAACTACAGAACAATGCCAAGGCATAATTAAGATGGCAAAGGCAGAACTGAAACCATCATCTTTGGCTCTCCGCAAAGGAGAAACAGCAGAAAATACCAAAGGAGTTAGAACAAG............................................................................................................................................................................................................................................................................................................................................................................TTCTGGTATGTTTATCAGTGCATCTGAAGACAAAACTGGAATTCTGGACCTCATTGAGGAGAAAATCGCAAAGGCGACTATGATCCCCAGGACACACGGAGAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATTTAATGTTTTGCGGTACGAAATAGGCCAGAGTTATTATTCACATTATGATGCGTTTGATCCTTCTCAATATGGTCCTCAGAAGAGCCAAAGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCATCCCTTTTTGTTATATTTATCTGATGTGGAAGAAGGTGGAGAAACCATGTTCCCTTTCGAG.........................................................................................AATGCACAGAATATGGATGTTAATTATGACTTCCGCAAGTGTATTGGTCTGAAAGTGAAGCCGCGTAGAGGGGATGGACTACTATTTTACTCGCTGTTTCCAAATGGTACAATTGATCCG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATCTCTTCACGGGAGCTGTGCAGTAATCCGAGGTGAAAAATGGGTTGCCACAAAGTGGATCAGGGATCAAGAAATGGATGAATAAACGAGTACATGTCTGGAAGTGGTGTTAATATAATTCTTTCGTAATTTAATGTAGCCACTCACTGGAACCTTTGAGCGAATTTTACAGTAAATATATCTAGTGTTTGTTCATATTGATCTGTGTCAGTTAACCCTTAATACGTTACTTGAGTCTTGGTTGCTCCCATTACCCACAAAGCTCACCCCATCTTGCAGTAAAAAAGAAGTCTAATTGTAATGACCGTGCGAATGTTTTGTAATAGGATCAGATCACGTGTTTCAAAAGTGTTGTACTAACACAAATATTATTATGACGCTAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0053H21-RnoJv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U590330" ref_strand="+" ref_description="SGN-U590330 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>gaacaaacactaaaaatatttactgggaaattcgctcaaaggttgcagtgggtggctacattaaattacgtacgaattattttgacaccacttccagacatgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0053H21-RnoJv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0053H21.1" temp_strand="-" temp_description="C02SLe0053H21.1  AC226516.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0053H21 sequenced_by:kribb upload_account_name:korea">
        <position start="132142" stop="131440"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="131842" g_stop="131740" g_length="103"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="103" r_length="103" r_score="0.903"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0053H21.1" gen_strand="-" ref_id="SGN-U590330" ref_strand="+">
        <total_alignment_score>0.903</total_alignment_score>
        <cumulative_length_of_scored_exons>103</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0053H21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U590330" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="131842" e_stop="131740"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAACAAACACTAGATATATTTACTGTAAAATTCGCTCAAAGGTTCCAGTGAGTGGCTACATTAAATTACGAAAGAATTATATTAACACCACTTCCAGACATGT</genome_strand>
        <mrna_strand>GAACAAACACTAAAAATATTTACTGGGAAATTCGCTCAAAGGTTGCAGTGGGTGGCTACATTAAATTACGTACGAATTATTTTGACACCACTTCCAGACATGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0053H21-RnoJv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U583743" ref_strand="+" ref_description="SGN-U583743 Tomato 200607#2 [10 ESTs aligned] (*GB) gi|147769814|emb|CAN76779.1| (e_value=5e-31) hypothetical; (*ATH) AT5G67350.1 (e_value=6e-22) | Symbol: None | expressed protein | chr5:26885516-26886712 REVERSE | Aliases: K8K14.7, K8K14_7; ">
      <seq>tttttttataatataatctatataaattaataccattcaaatgcatgcattgttaaattaaagtagtccccaccatcttcactcttaccaagtagtaacagagaagcccaactttatttttctccgtaataatcatttgaaaggcttaaaaaagctccacgctgctaaaaaaaaagccggctttatttgcgccccaatagtattcttgacttacaaacaaggaacgaacaattttctattgtcgcctgcaagcttattcctacatcccatttgtctccctctttatataactgttcctcttttttaactatattattctatatcgacctcgatcaacaagaacaagagcaagaaaaaatgatgaaaattactagggaaagcgaagaaattgttctcctcgaagaacaatacgatgaattagaagacgaatatgatgaagaagcattatcactgtgtgatcttccgaacaatgaagaggacgaaaagaaggaagaagtttctagaagtactagcgtagaaggcggacaattagaagattttgattttagctcttctggtggtaatttgttgaaagaatcagagatgtgtacggcagatgaaattttctacaaaggccaaatattaccgttgcgtcattcaattagtttgccaagtgatcggcgcaattgtcatgatacaaattcaagcagtagaagtagcagtattcgaagccaacgttcatctagcagtggcagttcatctaatttcaacacgaaatatcagcctaaaattcgaaatcaatttcattctcatcctagtccaacacctcaggttcgattttctaaagttagttttcaatcaaatgtcaacaattccacacgaaaatcagcattgtggagtctatttcgcgttggcctagttacaccaccagaaattgcattacaagatctgaaaaacagaggaaacagggatatttcaggaagtcgaaatagcacgagcagtagtagcagcgggagcttcggcaataatgataataagatgagaattaagaaaacgaaacagaggttttctctaggcagctgtaaatgttcagcaaatgtggtagaaacagttccaatcgtgaacagtagaagtacaattaagaaaataagaaaagccacaggggaccatgaacatgaagataagaaggattcatcagagaatatcaaatcgacaaaaaagcaagcaatgtcacgtcatcgaacgtttgagtggttaaagcaactttcactagaaggtccatcagatgaaacataaagatttcaaagtatcacgcatgcttagcttcttttttttcttctttttttcatgtaatgtaatgtaactttttttttttttgagtagtggaatcatgaagttgattaattgaagtaattgaggacgcaattataatggtagccaaaaaagagctaaggtgtacgtttgatgtgaactgtgattaaata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0053H21-RnoJv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0053H21.1" temp_strand="+" temp_description="C02SLe0053H21.1  AC226516.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0053H21 sequenced_by:kribb upload_account_name:korea">
        <position start="135557" stop="137620"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="135857" g_stop="137320" g_length="1464"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="1463" r_length="1463" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0053H21.1" gen_strand="+" ref_id="SGN-U583743" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>1464</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0053H21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U583743" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="135857" e_stop="137320"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTTTTATAATATAATCTATATAAATTAATACCATTCAAATGCATGCATTGTTAAATTAAAGTAGTCCCCACCATCTTCACTCTTCCCAAGTAGTAACAGAGAAGCCCAACTTTATTTTTCTCCGTAATAATCATTTGAAAGGCTTAAAAAAGCTCCACGCTGCTAAAAAAAAAGCCGGCTTTATTTGCGCCCCAATAGTATTCTTGACTTACAAACAAGGAACGAACAATTTTCTATTGTCGCCTGCAAGCTTATTCCTACATCCCATTTGTCTCCCTCTTTATATAACTGTTCCTCTTTTTTAACTATATTATTCTATATCGACCTCGATCAACAAGAACAAGAGCAAGAAAAAATGATGAAAATTACTAGGGAAAGCGAAGAAATTGTTCTCCTCGAAGAACAATACGATGAATTAGAAGACGAATATGATGAAGAAGCATTATCACTGTGTGATCTTCCGAACAATGAAGAGGACGAAAAGAAGGAAGAAGTTTCTAGAAGTACTAGCGTAGAAGGCGGACAATTAGAAGATTTTGATTTTAGCTCTTCTGGTGGTAATTTGTTGAAAGAATCAGAGATGTGTACGGCAGATGAAATTTTCTACAAAGGCCAAATATTACCGTTGCGTCATTCAATTAGTTTGCCAAGTGATCGGCGCAATTGTCATGATACAAATTCAAGCAGTAGAAGTAGCAGTATTCGAAGCCAACGTTCATCTAGCAGTGGCAGTTCATCTAATTTCAACACGAAATATCAGCCTAAAATTCGAAATCAATTTCATTCTCATCCTAGTCCAACACCTCAGGTTCGATTTTCTAAAGTTAGTTTTCAATCAAATGTCAACAATTCCACACGAAAATCAGCATTGTGGAGTCTATTTCGCGTTGGCCTAGTTACACCACCAGAAATTGCATTACAAGATCTGAAAAACAGAGGAAACAGGGATATTTCAGGAAGTCGAAATAGCACGAGCAGTAGTAGCAGCGGGAGCTTCGGCAATAATGATAATAAGATGAGAATTAAGAAAACGAAACAGAGGTTTTCTCTAGGCAGCTGTAAATGTTCAGCAAATGTGGTAGAAACAGTTCCAATCGTGAACAGTAGAAGTACAATTAAGAAAATAAGAAAAGCCACAGGGGACCATGAACATGAAGATAAGAAGGATTCATCAGAGAATATCAAATCGACAAAAAAGCAAGCAATGTCACGTCATCGAACGTTTGAGTGGTTAAAGCAACTTTCACTAGAAGGTCCATCAGATGAAACATAAAGATTTCAAAGTATCACGCATGCTTAGCTTCTTTTTTTTCTTCTTTTTTTCATGTAATGTAATGTAACTTTTTTTTTTTTTTGAGTAGTGGAATCATGAAGTTGATTAATTGAAGTAATTGAGGACGCAATTATAATGGTAGCCAAAAAAGAGCTAAGGTGTACGTTTGATGTGAACTGTGATTAAATA</genome_strand>
        <mrna_strand>TTTTTTTATAATATAATCTATATAAATTAATACCATTCAAATGCATGCATTGTTAAATTAAAGTAGTCCCCACCATCTTCACTCTTACCAAGTAGTAACAGAGAAGCCCAACTTTATTTTTCTCCGTAATAATCATTTGAAAGGCTTAAAAAAGCTCCACGCTGCTAAAAAAAAAGCCGGCTTTATTTGCGCCCCAATAGTATTCTTGACTTACAAACAAGGAACGAACAATTTTCTATTGTCGCCTGCAAGCTTATTCCTACATCCCATTTGTCTCCCTCTTTATATAACTGTTCCTCTTTTTTAACTATATTATTCTATATCGACCTCGATCAACAAGAACAAGAGCAAGAAAAAATGATGAAAATTACTAGGGAAAGCGAAGAAATTGTTCTCCTCGAAGAACAATACGATGAATTAGAAGACGAATATGATGAAGAAGCATTATCACTGTGTGATCTTCCGAACAATGAAGAGGACGAAAAGAAGGAAGAAGTTTCTAGAAGTACTAGCGTAGAAGGCGGACAATTAGAAGATTTTGATTTTAGCTCTTCTGGTGGTAATTTGTTGAAAGAATCAGAGATGTGTACGGCAGATGAAATTTTCTACAAAGGCCAAATATTACCGTTGCGTCATTCAATTAGTTTGCCAAGTGATCGGCGCAATTGTCATGATACAAATTCAAGCAGTAGAAGTAGCAGTATTCGAAGCCAACGTTCATCTAGCAGTGGCAGTTCATCTAATTTCAACACGAAATATCAGCCTAAAATTCGAAATCAATTTCATTCTCATCCTAGTCCAACACCTCAGGTTCGATTTTCTAAAGTTAGTTTTCAATCAAATGTCAACAATTCCACACGAAAATCAGCATTGTGGAGTCTATTTCGCGTTGGCCTAGTTACACCACCAGAAATTGCATTACAAGATCTGAAAAACAGAGGAAACAGGGATATTTCAGGAAGTCGAAATAGCACGAGCAGTAGTAGCAGCGGGAGCTTCGGCAATAATGATAATAAGATGAGAATTAAGAAAACGAAACAGAGGTTTTCTCTAGGCAGCTGTAAATGTTCAGCAAATGTGGTAGAAACAGTTCCAATCGTGAACAGTAGAAGTACAATTAAGAAAATAAGAAAAGCCACAGGGGACCATGAACATGAAGATAAGAAGGATTCATCAGAGAATATCAAATCGACAAAAAAGCAAGCAATGTCACGTCATCGAACGTTTGAGTGGTTAAAGCAACTTTCACTAGAAGGTCCATCAGATGAAACATAAAGATTTCAAAGTATCACGCATGCTTAGCTTCTTTTTTTTCTTCTTTTTTTCATGTAATGTAATGTAAC-TTTTTTTTTTTTTGAGTAGTGGAATCATGAAGTTGATTAATTGAAGTAATTGAGGACGCAATTATAATGGTAGCCAAAAAAGAGCTAAGGTGTACGTTTGATGTGAACTGTGATTAAATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0053H21-RnoJv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U563725" ref_strand="+" ref_description="SGN-U563725 Tomato 200607#2 [5 ESTs aligned] (*GB) gi|157345341|emb|CAO14639.1| (e_value=8e-119) unnamed; (*ATH) AT3G27380.1 (e_value=3e-120)  Symbol: None | succinate dehydrogenase, iron-sulphur subunit, mitochondrial (SDH2-1), nearly identical to mitochondrial succinate dehydrogenase iron-sulphur subunit (sdh2-1) (gi:12049598) from Arabidopsis thaliana | chr3:10132197-10133997 REVERSE | ... ; (*SWP) sp|Q8LBZ7|DHSB1_ARATH (e_value=2e-119) Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 1, mitochondrial OS=Arabidopsis thaliana GN=SDH2-1; ">
      <seq>cgaggctacttgttgcccgagctgacgcttccgacaccaaatcccagcaggtccaacctcaagtcgtttcaaatttaccgatggaatccagataacccagggaaacccgagctccaagaatacaaaattgatctgaaggaatgtggccctatggtcttagacgccctaatcaaaatcaagaatgaagttgacccttcaccaaccttcagaagatcttgcagagaagggatctgtgggtcctgtgccatgaacatcgacggctgtaatggactcgcttgtttgacaaagatctcatcggattctgtatcgacgattacgccactgccacatatgtttgtgattaaggatttggtagtggatatgactaatttttataatcagtataagtctattgagccttggctgaagagaaaaacacctgcgccaacgcctggaaaggagatacctcagagcaagagcgataaggctaagttggatgggatgtacgagtgtattctctgtgcttgttgtagtacatcatgccctagctactggtggaatcctgagtcttatcttggtcctgctgcactactccatgccaatagatggatcatggatagccgtgatgaacatactctggagcgcctggacgcagttaatgatgaattcaagctttatcgctgccacactattttgaactgttctcgtgcttgcccaaagggatttaatcctggcaagctcagaacatcaagcgcctggagatggcgccttgagcctgcactctgcagtgtagtgtaccagtctattctgctaacattgattttggaggaccagtaggaggtagttctcaaaataatttatgcacagatcgtaatttgctttctgagatttttttttggtgctagggtgttgcccttccccgagccctgtgtgaatatgggattcttttgtgcaccgtgctgccttattcgagatgaaaggtgcatctcacctgaaatattgtactaacaattagtatgatagctgaagtgaagcaaacatgtaatagcagagagtatatacaaatttatgaactgatttatcatagaaaataatgatttctataaatattcgtttgaaaatatacctcataaaaacttcatcaattatataaaacaaaatttatatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0053H21-RnoJv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0053H21.1" temp_strand="-" temp_description="C02SLe0053H21.1  AC226516.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0053H21 sequenced_by:kribb upload_account_name:korea">
        <position start="141093" stop="137985"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="140793" g_stop="140210" g_length="584"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="584" r_length="584" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="140209" i_stop="138837" i_length="1373">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="138836" g_stop="138274" g_length="563"/>
          <reference_exon_boundary r_type="cDNA" r_start="585" r_stop="1147" r_length="563" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0053H21.1" gen_strand="-" ref_id="SGN-U563725" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>1147</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0053H21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U563725" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="140793" e_stop="140210"/>
          <exon e_start="138836" e_stop="138274"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGAGGCTACTTGTTGCCCGAGCTCACGCTTCGGACACCAAATCCCAGCAGGTCCAACCTCAAGTCGTTTCAAATTTACCGATGGAATCCAGATAACCCAGGGAAACCCGAGCTCCAAGAATACAAAATTGATCTGAAGGAATGTGGCCCTATGGTCTTAGACGCCCTAATCAAAATCAAGAATGAAGTTGACCCTTCACCAACCTTCAGAAGATCTTGCAGAGAAGGGATCTGTGGGTCCTGTGCCATGAACATCGACGGCTGTAATGGACTCGCTTGTTTGACAAAGATCTCATCGGATTCTGTATCGACGATTACGCCACTGCCACATATGTTTGTGATTAAGGATTTGGTAGTGGATATGACTAATTTTTATAATCAGTATAAGTCTATTGAGCCTTGGCTGAAGAGAAAAACACCTGCGCCAACGCCTGGAAAGGAGATACCTCAGAGCAAGAGCGATAAGGCTAAGTTGGATGGGATGTACGAGTGTATTCTCTGTGCTTGTTGTAGTACATCATGCCCTAGCTACTGGTGGAATCCTGAGTCTTATCTTGGTCCTGCTGCACTACTCCATGCCAATAGGTAATATTTACTTGATTTTTTTTTCATGTTAAGCTCTTCCTGTTTTGACTTCACTCTCTTTTAATGTTCTGTATCTTTTAAATTGTTATATTCTGGTTGCATTTGGATCAAATAATAAGTTAAAGATACCTATAATTTGTCGGCAGAGTTACCGTTATATTCCTTATTGGTGTTAGCCTGGTAGGTAGCATGTATCTCATGAAATTAGTCGAGTAACCATGGTCAGTAAGATTTTAGTAAGTACAACAACATGTATGGTACTTGTGCTTAAATGTAACAGGATGCCCATAAATTTTGTGTGAATAAATTGTATCAGATTAAGAAAGTTGTGTTCCTTTTAGATACAAAGTGAATCTCATTTATATGAGGTGCAACTTCTTGTAGAAGTTTGATGAATCGTATGCGGTAGGATCTTATTGTTTGGTAAAATGCAACTTCTATGGAAGTCTTGGATATTATTCTGAGTTATCACTAGACAACTTTGAAACATATTACTTTTCTCAACCTGCTAATCCCTTGTTGGTTCATTTCTTTGTTGCTAGTTTCTAACCTATGGCATCTCTGTTATTTGACTCAAAATTTAAGAATATCCAAGCAACATCTCTTTTTACCTATACAATCTTTCAGATTTTTGACTATCATGTGATTAGTTTTTTTGTCTGTGCTCTCCAAGCCTAACTAATCTGCAGAGGAAACTAGGTATTTCCTCCTTTGCATAAACATCATGCCCTGCTCTCTCATTCCCTCTGCTGTCTACGCCATCACAACTATTTCTTGGAGCACCCCGCACCTATTGTTCTGATCGTTCCTCTCTAGAACAATCAGCTTTTCTCAATTCTTAGATTAGCTGCAGGGTTGACCTACATTATGTTTGGTGTGTGCTCAAGCACCCATTGTCTGTTATTCTTTCTCAATGCGGAAATTTCAAGTGTGGATGGAAAATGTTCATATTACATTCTGCGCTTGTCATCATTTAAAAATAATGACACCAAATGCAGATGAAGGGACCTTTTCTGTTCAGTTCTACAAACTTGGAAATTTATTATGCCAAAGGGAATATTAGAGAGATGCTGATATCTGTGGGGGCAAACTCAACTACTCAACGGATGGTTTAGGTTTCTTTCCAAACTGCCTTTAGAGTTGTATGATTTATGTGCTCAGAGATGTAGAACGTTATTTCCCTCGGTCATTTGCATGATGAGGGGATAAGAGTTTTAAATTTCTGAAATTTCTGTACTTGCCTTGATGTTATTAAGAGGTTTGGATTGTATATAAGTTGCTCTACCCCCTTAACCCTTCTATCCATTGCTATTTCAGATGTTGTTCATTATTATATGTACTGAAAGGGGTTATATCTCAACTTTTAAATGTAGATGGATCATGGATAGCCGTGATGAACATACTCTGGAGCGCCTGGACGCAGTTAATGATGAATTCAAGCTTTATCGCTGCCACACTATTTTGAACTGTTCTCGTGCTTGCCCAAAGGGATTTAATCCTGGCAAGCTCAGAACATCAAGCGCCTGGAGATGGCGCCTTGAGCCTGCACTCTGCAGTGTAGTGTACCAGTCTATTCTGCTAACATTGATTTTGGAGGACCAGTAGGAGGTAGTTCTCAAAATAATTTATGCACAGATCGTAATTTGCTTTCTGAGATTTTTTTTTGGTGCTAGGGTGTTGCCCTTCCCCGAGCCCTGTGTGAATATGGGATTCTTTTGTGCACCGTGCTGCCTTATTCGAGATGAAAGGTGCATCTCACCTGAAATATTGTACTAACAATTAGTATGATAGCTGAAGTGAAGCAAACATGTAATAGCAGAGAGTATATACAAATTTATGAACTGATTTATCATAGAAAATAATGATTTCTATAAATATTCGTTTGAAATTATACCTCATAAAAACTTCATCAATTATATAAAACATTTCTTATATT</genome_strand>
        <mrna_strand>CGAGGCTACTTGTTGCCCGAGCTGACGCTTCCGACACCAAATCCCAGCAGGTCCAACCTCAAGTCGTTTCAAATTTACCGATGGAATCCAGATAACCCAGGGAAACCCGAGCTCCAAGAATACAAAATTGATCTGAAGGAATGTGGCCCTATGGTCTTAGACGCCCTAATCAAAATCAAGAATGAAGTTGACCCTTCACCAACCTTCAGAAGATCTTGCAGAGAAGGGATCTGTGGGTCCTGTGCCATGAACATCGACGGCTGTAATGGACTCGCTTGTTTGACAAAGATCTCATCGGATTCTGTATCGACGATTACGCCACTGCCACATATGTTTGTGATTAAGGATTTGGTAGTGGATATGACTAATTTTTATAATCAGTATAAGTCTATTGAGCCTTGGCTGAAGAGAAAAACACCTGCGCCAACGCCTGGAAAGGAGATACCTCAGAGCAAGAGCGATAAGGCTAAGTTGGATGGGATGTACGAGTGTATTCTCTGTGCTTGTTGTAGTACATCATGCCCTAGCTACTGGTGGAATCCTGAGTCTTATCTTGGTCCTGCTGCACTACTCCATGCCAATAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGATCATGGATAGCCGTGATGAACATACTCTGGAGCGCCTGGACGCAGTTAATGATGAATTCAAGCTTTATCGCTGCCACACTATTTTGAACTGTTCTCGTGCTTGCCCAAAGGGATTTAATCCTGGCAAGCTCAGAACATCAAGCGCCTGGAGATGGCGCCTTGAGCCTGCACTCTGCAGTGTAGTGTACCAGTCTATTCTGCTAACATTGATTTTGGAGGACCAGTAGGAGGTAGTTCTCAAAATAATTTATGCACAGATCGTAATTTGCTTTCTGAGATTTTTTTTTGGTGCTAGGGTGTTGCCCTTCCCCGAGCCCTGTGTGAATATGGGATTCTTTTGTGCACCGTGCTGCCTTATTCGAGATGAAAGGTGCATCTCACCTGAAATATTGTACTAACAATTAGTATGATAGCTGAAGTGAAGCAAACATGTAATAGCAGAGAGTATATACAAATTTATGAACTGATTTATCATAGAAAATAATGATTTCTATAAATATTCGTTTGAAAATATACCTCATAAAAACTTCATCAATTATATAAAACAAAATTTATATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0053H21-RnoJv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U574976" ref_strand="+" ref_description="SGN-U574976 Tomato 200607#2 [4 ESTs aligned] (*GB) gi|157357410|emb|CAO63944.1| (e_value=1e-134) unnamed; (*ATH) AT4G33920.1 (e_value=2e-122)  Symbol: None | protein phosphatase 2C family protein / PP2C family protein, similar to Ser/Thr protein phosphatase 2C (PP2C6) (GI:15020818) (Arabidopsis thaliana); similar to protein phosphatase 2C (GI:3608412) (Mesembryanthemum crystallinum); conta... ; (*SWP) sp|Q9LUS8|P2CH1_ARATH (e_value=1e-23) Probable protein phosphatase 2C homolog 1 OS=Arabidopsis thaliana GN=At3g16560; ">
      <seq>caaaaaaaaaaaaaatcctctttcactctacagccagcagtctaagatgttaagctcctgttttgggagctgctttggtggggacgatggtgatgatcttttatggcatatggacttgaagccacatgccacaggtgaatattctgttgctgtagttcaggccaattctttgcttgaagatcaaggtcaagtttttacaacccctagtgctacttatgtgggtgtttatgatggtcatggtggcccgcaagcttctcgcttcatcaacaacaatctcttccctcaactacaaaagctggctttggaagaaggaggattgtctgaggacgtgatcaggaaagcatttgatgctattgaggagggattcttgcgtttggtgaaacagtcttggctggatcaacctcagattgcatctgcagggtcttgttgtctatttggagcaatctcaaaagatgaattgtatgtggcaaatcttggggactccagggcagtgcttggcaggagagcagagacaggccagacgggtgattcagcagtagtagtggcagaacgtttgtcgatagatcataatgttggggttgaggaggttaggaaggaggtagaggcactgcatccagatgattctcatgttgtggtctacgttcgaggggtttggagaattaagggtataattcaggttttctagatcaattggtgatgtctatctgaagaaacctgagtttaatagagatcctatgttcatacaatatggatatcctattcctttaaaaagagctgtaatgtcagcagagccctccatattgatccgaaagataagaccagaagacttatttttgatatttgcatcggatggcctatgggatcaactaaccgatgacgaagctaaggatattgttttgaagaatcctagaattggaatagcaaaacgattagtgagagctgcccttgagggtgctgcagagaagaaagaaatgagatatgaggacatcaaacgactagagaagggggaaaggcggcacgttcatgatgatatcacagttattgtgatatatttggatcaccctggaaggtcctcaaattctggaattaacattgttaagggcacgaatgtccctcttgacatatactccttgaactcgggtcattaaggagagaacatatcttatgtttccccatgaaaagtgtctaatacatgtatacattatatataccattttgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0053H21-RnoJv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0053H21.1" temp_strand="+" temp_description="C02SLe0053H21.1  AC226516.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0053H21 sequenced_by:kribb upload_account_name:korea">
        <position start="141447" stop="145141"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="141746" g_stop="142038" g_length="293"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="293" r_length="293" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="142039" i_stop="142405" i_length="367">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="142406" g_stop="142788" g_length="383"/>
          <reference_exon_boundary r_type="cDNA" r_start="294" r_stop="676" r_length="383" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="142789" i_stop="144091" i_length="1303">
            <donor d_prob="0.957" d_score="1.00"/>
            <acceptor a_prob="0.977" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="144092" g_stop="144328" g_length="237"/>
          <reference_exon_boundary r_type="cDNA" r_start="677" r_stop="914" r_length="238" r_score="0.992"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="144329" i_stop="144536" i_length="208">
            <donor d_prob="0.804" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="144537" g_stop="144841" g_length="305"/>
          <reference_exon_boundary r_type="cDNA" r_start="915" r_stop="1219" r_length="305" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0053H21.1" gen_strand="+" ref_id="SGN-U574976" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>1218</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0053H21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U574976" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="141746" e_stop="142038"/>
          <exon e_start="142406" e_stop="142788"/>
          <exon e_start="144092" e_stop="144328"/>
          <exon e_start="144537" e_stop="144841"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAAAAAAAAAAAATCCTCTTTCACTCTACAGCCAGCAGTCTAAGATGTTAAGCTCCTGTTTTGGGAGCTGCTTTGGTGGGGACGATGGTGATGATCTTTTATGGCATATGGACTTGAAGCCACATGCCACAGGTGAATATTCTGTTGCTGTAGTTCAGGCCAATTCTTTGCTTGAAGATCAAGGTCAAGTTTTTACAACCCCTAGTGCTACTTATGTGGGTGTTTATGATGGTCATGGTGGCCCGCAAGCTTCTCGCTTCATCAACAACAATCTCTTCCCTCAACTACAAAGTATGTACTATTTCTTGATACTATTTTACTACTATGAAAGATTGGGTTCACTCTGTTTCTTGTCAGTGGGGTCTAATAGCAAAACTATGCTAGTGCAAATTTTCTAATTTTATATTTCTAAACCTATAATTTTTTTTGACTTCTTGATTGTTGGTTTATGTGGTGTGTTTAGTTAGTATGTTGAAATTATCATGAGATTGATCAGGGGAGGCTGGGAGAAAATTGACTTGGTCATGCGTGGAGTAGAGGAGAAAAAGGAATTGAGCTTGTTCAAATTGTAGACATGTTTAATTTTTGAATGTTTGAAATAGGTGTAATTAGAGATATCATTTTGTGTTTGATTTCCTTGTTTTTTCGATTATTATAGAGCTGGCTTTGGAAGAAGGAGGATTGTCTGAGGACGTGATCAGGAAAGCATTTGATGCTATTGAGGAGGGATTCTTGCGTTTGGTGAAACAGTCTTGGCTGGATCAACCTCAGATTGCATCTGCAGGGTCTTGTTGTCTATTTGGAGCAATCTCAAAAGATGAATTGTATGTGGCAAATCTTGGGGACTCCAGGGCAGTGCTTGGCAGGAGAGCAGAGACAGGCCAGACGGGTGATTCAGCAGTAGTAGTGGCAGAACGTTTGTCGATAGATCATAATGTTGGGGTTGAGGAGGTTAGGAAGGAGGTAGAGGCACTGCATCCAGATGATTCTCATGTTGTGGTCTACGTTCGAGGGGTTTGGAGAATTAAGGGTATAATTCAGGTATCTGTTCTCAATCCTCTTTTCTTCTGTCCTATTAATGCAGTCGACAGTTTTGATTAGACATTTAACCATTCAAGGTTATTAAATTTGTTTACTAGCCTTCATGATATTCAGTAGAATTAATACATCTTTTCAGACCTGCAGCCATGATGAATCAGACCTCCACTTGAAGAAAGCTAATTAGTCCTTTCTGAAATGCGGTTTTGTTATGACTAGGTGGCGTCTGAGAATGTTAATAGTTTCTATTCAATCTAAAGTACATATGGTGGAAGGAGAAAATAGTCAGAGCTCTTTCATTCTCAATTCTGACTTCCGTTAAGTTTACAGTGGTCCATCTGTTGTTACCTCTTAGCTGTCTAGATACGCTAATGTTCTGAAAGTAAGAAAGTTATGGAAGCTAGACAACAAAGAAGACCTAAGTCTTTTTTTTCTGATCTCTGGTTTGTCGTCACACACAAATACAAAGATTCATATTTATGTAGTTAGAAACAATTCGCCTTTCTGTTGCTCGAGCATGTTATGAAGGTGGTCCAAAATCTCCGGGAACTCATAGTTGAGGCTTCTAAATAAGTCACTTTATATATGCTAATTATGTGTGTGCACTCATAGCAAGTTGATCATACCTTTTAGACGTGGTGTATGTCAAGTCTTTCTGGGGTGCCTCTTTTGTGTGTTGGCATAAAGTATGCTTTCATCTACTTTTTCTGAGGTTATAGACCGTATGTTTAAATTTTGTCCTTTTAGCTTCTTAGCCAATCACATTATAATTTATACCCTTGTCAAAAAAAAACATGTCACTTCATATGTTGATTATGTAGATTTGTGTGTCTAGTTCTTTTGGAGAATAAACATCTTTTTATCTTCTACTTTTTAAGATTTTAGACCTTGTGTATAAGCAATTTCTCCTTTTCAATCTAGTAAAAGACACATCAGTGTCAAGATTTACAAGTTTGCACCTATGGGATTCACATCAAGGCAAAAACATTTTGTTGCATGTGAAGTAATTTTGTTTTACGCATGGACACAAAGGAATGTCCTTTCCCGTTTATCCCTTCGCTCTTAACCACTTACTAGCAATCTTTTATCTTTTGGTAACTACAATTTGTAGCAGCGGCTGCATGATACTTATCTTTCCATCTGTATCCTTCATTTTAACTTCAGCAAGGTTCCCTTGTTATATGAAAAATGCCAAATAAAGTCTGAAGCTGACTGTTTTCGTTAAAAGCTTGCAAGCAGCCAATATCAGGGAGCAATCCTATGTTTTGAGAAAATCCATCTCATATTGCCTATTTATCTGTACCAGG-TTTCTAGATCAATTGGTGATGTCTATCTGAAGAAACCTGAGTTTAATAGAGATCCTATGTTCATACAATATGGATATCCTATTCCTTTAAAAAGAGCTGTAATGTCAGCAGAGCCCTCCATATTGATCCGAAAGATAAGACCAGAAGACTTATTTTTGATATTTGCATCGGATGGCCTATGGGATCAACTAACCGATGACGAAGCTAAGGATATTGTTTTGAAGAATCCTAGAATTGTGAGTATCGACCCCTCCTATTCTATCACATTCTTTAATTTTTGGAAACAGTACGTACCCTCATCCATTTTGTTATCTGTAAAGTGGATGCAGGCTCTTATGATAACTAGACTCTCCTTGAAGTAATTTTGTGATCAAACTTCTCCTTCATGTTGGGCATAATTAACTAATGAATAAGATAACTGTGTTTTCTTCCTCATTTCTCCAGGGAATAGCAAAACGATTAGTGAGAGCTGCCCTTGAGGGTGCTGCAGAGAAGAAAGAAATGAGATATGAGGACATCAAACGACTAGAGAAGGGGGAAAGGCGGCACGTTCATGATGATATCACAGTTATTGTGATATATTTGGATCACCCTGGAAGGTCCTCAAATTCTGGAATTAACATTGTTAAGGGCACGAATGTCCCTCTTGACATATACTCCTTGAACTCGGGTCATTAAGGAGAGAACATATCTTATGTTTCCCCATGAAAAGTGTCTAATACATGTATACATTATATATACCATTTTGT</genome_strand>
        <mrna_strand>CAAAAAAAAAAAAAATCCTCTTTCACTCTACAGCCAGCAGTCTAAGATGTTAAGCTCCTGTTTTGGGAGCTGCTTTGGTGGGGACGATGGTGATGATCTTTTATGGCATATGGACTTGAAGCCACATGCCACAGGTGAATATTCTGTTGCTGTAGTTCAGGCCAATTCTTTGCTTGAAGATCAAGGTCAAGTTTTTACAACCCCTAGTGCTACTTATGTGGGTGTTTATGATGGTCATGGTGGCCCGCAAGCTTCTCGCTTCATCAACAACAATCTCTTCCCTCAACTACAAA...............................................................................................................................................................................................................................................................................................................................................................................AGCTGGCTTTGGAAGAAGGAGGATTGTCTGAGGACGTGATCAGGAAAGCATTTGATGCTATTGAGGAGGGATTCTTGCGTTTGGTGAAACAGTCTTGGCTGGATCAACCTCAGATTGCATCTGCAGGGTCTTGTTGTCTATTTGGAGCAATCTCAAAAGATGAATTGTATGTGGCAAATCTTGGGGACTCCAGGGCAGTGCTTGGCAGGAGAGCAGAGACAGGCCAGACGGGTGATTCAGCAGTAGTAGTGGCAGAACGTTTGTCGATAGATCATAATGTTGGGGTTGAGGAGGTTAGGAAGGAGGTAGAGGCACTGCATCCAGATGATTCTCATGTTGTGGTCTACGTTCGAGGGGTTTGGAGAATTAAGGGTATAATTCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTTCTAGATCAATTGGTGATGTCTATCTGAAGAAACCTGAGTTTAATAGAGATCCTATGTTCATACAATATGGATATCCTATTCCTTTAAAAAGAGCTGTAATGTCAGCAGAGCCCTCCATATTGATCCGAAAGATAAGACCAGAAGACTTATTTTTGATATTTGCATCGGATGGCCTATGGGATCAACTAACCGATGACGAAGCTAAGGATATTGTTTTGAAGAATCCTAGAATT................................................................................................................................................................................................................GGAATAGCAAAACGATTAGTGAGAGCTGCCCTTGAGGGTGCTGCAGAGAAGAAAGAAATGAGATATGAGGACATCAAACGACTAGAGAAGGGGGAAAGGCGGCACGTTCATGATGATATCACAGTTATTGTGATATATTTGGATCACCCTGGAAGGTCCTCAAATTCTGGAATTAACATTGTTAAGGGCACGAATGTCCCTCTTGACATATACTCCTTGAACTCGGGTCATTAAGGAGAGAACATATCTTATGTTTCCCCATGAAAAGTGTCTAATACATGTATACATTATATATACCATTTTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>38</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="+" PGL_start="3093" PGL_stop="5500"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="3093" e_stop="3357"/>
            <exon e_start="3506" e_stop="3649"/>
            <exon e_start="4000" e_stop="4098"/>
            <exon e_start="5180" e_stop="5256"/>
            <exon e_start="5446" e_stop="5500"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.768" acc_prob="1.000" e_score="0.928"/>
          <exon-intron don_prob="0.319" acc_prob="0.993" e_score="0.993"/>
          <exon-intron don_prob="0.999" acc_prob="0.976" e_score="0.990"/>
          <exon-intron don_prob="0.998" acc_prob="0.979" e_score="0.974"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.928">
            <gDNA_exon_boundary e_start="3093" e_stop="3357" e_length="265"/>
          </exon>
          <intron i_serial="1" don_prob="0.768" acc_prob="1.000">
            <gDNA_intron_boundary i_start="3358" i_stop="3505" i_length="148"/>
          </intron>
          <exon e_serial="2" e_score="0.993">
            <gDNA_exon_boundary e_start="3506" e_stop="3649" e_length="144"/>
          </exon>
          <intron i_serial="2" don_prob="0.319" acc_prob="0.993">
            <gDNA_intron_boundary i_start="3650" i_stop="3999" i_length="350"/>
          </intron>
          <exon e_serial="3" e_score="0.990">
            <gDNA_exon_boundary e_start="4000" e_stop="4098" e_length="99"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="0.976">
            <gDNA_intron_boundary i_start="4099" i_stop="5179" i_length="1081"/>
          </intron>
          <exon e_serial="4" e_score="0.974">
            <gDNA_exon_boundary e_start="5180" e_stop="5256" e_length="77"/>
          </exon>
          <intron i_serial="4" don_prob="0.998" acc_prob="0.979">
            <gDNA_intron_boundary i_start="5257" i_stop="5445" i_length="189"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="5446" e_stop="5500" e_length="55"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="3093" stop="3357"/>
              <exon start="3506" stop="3649"/>
              <exon start="4000" stop="4098"/>
              <exon start="5180" stop="5256"/>
              <exon start="5446" stop="5500"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U563566" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTGAGTGAAATAGACAAGGGACCCAGGCGGTTAGTGATACTAGATCATTAGCCAGACTTTTCGGCCTTCACGTGGGAGGCTTGAAACATGAGCGCGAAATTTCGGTTGGTTTGAGAAGGCGCAAAAACAGTCCTCTATTCTTATGTCCCTTGTTTTTAACTACTACTAGGGTTTTAATCTTCTCCGGTGGCCGCCATGGAAGAAGTTCGGTCTACCACAGCTTGGGTCGCTACTCACTCCTCTCATGTCACCGTTGATTTCACAG : GCATTGAGAAGGTTGCTGAAAATATGAAGAACTCATTAACAAAAGTGGAGTGGGATTTTGAAGGGATTCACTATTTTGATAACGGGCCACTCACCGTTCAGTATTTGTTGGTCTTGGATACATTGAATTTCTGTTTCTGGCCAG : ATGAGGAGATGAGTTATGATCATCTGGCATCCGGATTAAAGGTTACTCTTGAAAGTGACAAATCTGCATTTGATGCTGATCGTCTACAGAAATATACTG : GTCCTCAATTAAGGAAAATGTTGAACTGGTCAAGACCATTGCCTTTGGAGGATGAACGAGTGCGCTTATTGCATGAG : GTTGGGCTTGAGCTTGAGAGGAGCTTTGAGGGAAAGGCATCTAAACTTGTGGAGT</gDNA_template>
            <first_frame> V  S  E  I  D  K  G  P  R  R  L  V  I  L  D  H  *  P  D  F  S  A  F  T  W  E  A  *  N  M  S  A  K  F  R  L  V  *  E  G  A  K  T  V  L  Y  S  Y  V  P  C  F  *  L  L  L  G  F  *  S  S  P  V  A  A  M  E  E  V  R  S  T  T  A  W  V  A  T  H  S  S  H  V  T  V  D  F  T   : G  I  E  K  V  A  E  N  M  K  N  S  L  T  K  V  E  W  D  F  E  G  I  H  Y  F  D  N  G  P  L  T  V  Q  Y  L  L  V  L  D  T  L  N  F  C  F  W  P   : D  E  E  M  S  Y  D  H  L  A  S  G  L  K  V  T  L  E  S  D  K  S  A  F  D  A  D  R  L  Q  K  Y  T   : G  P  Q  L  R  K  M  L  N  W  S  R  P  L  P  L  E  D  E  R  V  R  L  L  H  E  :  V  G  L  E  L  E  R  S  F  E  G  K  A  S  K  L  V  E  </first_frame>
            <second_frame>  *  V  K  *  T  R  D  P  G  G  *  *  Y  *  I  I  S  Q  T  F  R  P  S  R  G  R  L  E  T  *  A  R  N  F  G  W  F  E  K  A  Q  K  Q  S  S  I  L  M  S  L  V  F  N  Y  Y  *  G  F  N  L  L  R  W  P  P  W  K  K  F  G  L  P  Q  L  G  S  L  L  T  P  L  M  S  P  L  I  S  Q  :  A  L  R  R  L  L  K  I  *  R  T  H  *  Q  K  W  S  G  I  L  K  G  F  T  I  L  I  T  G  H  S  P  F  S  I  C  W  S  W  I  H  *  I  S  V  S  G  Q  :  M  R  R  *  V  M  I  I  W  H  P  D  *  R  L  L  L  K  V  T  N  L  H  L  M  L  I  V  Y  R  N  I  L  :  V  L  N  *  G  K  C  *  T  G  Q  D  H  C  L  W  R  M  N  E  C  A  Y  C  M  R :   L  G  L  S  L  R  G  A  L  R  E  R  H  L  N  L  W  S </second_frame>
            <third_frame>   E  *  N  R  Q  G  T  Q  A  V  S  D  T  R  S  L  A  R  L  F  G  L  H  V  G  G  L  K  H  E  R  E  I  S  V  G  L  R  R  R  K  N  S  P  L  F  L  C  P  L  F  L  T  T  T  R  V  L  I  F  S  G  G  R  H  G  R  S  S  V  Y  H  S  L  G  R  Y  S  L  L  S  C  H  R  *  F  H  R :   H  *  E  G  C  *  K  Y  E  E  L  I  N  K  S  G  V  G  F  *  R  D  S  L  F  *  *  R  A  T  H  R  S  V  F  V  G  L  G  Y  I  E  F  L  F  L  A  R :   *  G  D  E  L  *  S  S  G  I  R  I  K  G  Y  S  *  K  *  Q  I  C  I  *  C  *  S  S  T  E  I  Y  W :   S  S  I  K  E  N  V  E  L  V  K  T  I  A  F  G  G  *  T  S  A  L  I  A  *   : G  W  A  *  A  *  E  E  L  *  G  K  G  I  *  T  C  G   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0053H21.1" strand="+"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="3270" stop="3357"/>
                    <exon start="3506" stop="3649"/>
                    <exon start="4000" stop="4098"/>
                    <exon start="5180" stop="5256"/>
                    <exon start="5446" stop="5499"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>462</number_coding_nucleotides>
                  <number_encoded_amino_acids>154</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SSPVAAMEEVRSTTAWVATHSSHVTVDFTGIEKVAENMKNSLTKVEWDFEGIHYFDNGPLTVQYLLVLDTLNFCFWPDEEMSYDHLASGLKVTLESDKSAFDADRLQKYTGPQLRKMLNWSRPLPLEDERVRLLHEVGLELERSFEGKASKLVE</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="+" PGL_start="5755" PGL_stop="7600"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="5755" e_stop="5969"/>
            <exon e_start="7102" e_stop="7600"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.976" acc_prob="0.982" e_score="1.000"/>
          <exon-only e_score="0.984"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="5755" e_stop="5969" e_length="215"/>
          </exon>
          <intron i_serial="1" don_prob="0.976" acc_prob="0.982">
            <gDNA_intron_boundary i_start="5970" i_stop="7101" i_length="1132"/>
          </intron>
          <exon e_serial="2" e_score="0.984">
            <gDNA_exon_boundary e_start="7102" e_stop="7600" e_length="499"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="5755" stop="5969"/>
              <exon start="7102" stop="7600"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U582589" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAGACATAAGCTCAATAACCATATTTGCTGATTATATTGTTCCAGCTGTCCTTCAGCAACTTGGAGTGCTGAGATATCGTTCTTCCCTGGATAATATTATCAAGAAAAATACTGAAATTGTCTCAGGCAGTGAGGAGGAAGTAGAACTCCGAGCCTGCTCTGTTTATGCTGTGGAGAAAATAAAGGAGTTGATCAGTAAAAAGACTGGGAAGCAG : GTGTTGAGTGTTGAACTGGATCTCTGGTTATGGGCTTTTGGCATACAATGCCCATCTCTTCAACACCATCGGACACTCTCTATCTATTATTGACTATAGTAATTAAGCTCCATTTTCATTGCAGTCTTGCATACAATTATGGTCTTGATTTTGGGATTTTGACATTTCCACGTCTAGATGTAACAGTACAGAAATTATACAGGATTATTTTCTCCTCTTGGTGGTGAATTTACTTTTTTCAAGGAGTGCAGAGGAGAGGTTGATTATCCGTTTATGCAGTACCTTGTATAATGTTGATGGGCTCAACACTCGGGCTGTTTGGTTAGAGTTATGGATGTATTCGTTTAGATAGAATTTAGTGTAGGATGAGTTATTAGTTATTCAAATATTAGTTATATAAGATTTAATTATGCACATATATTAGTCATGAAAGATTTAGTTAGATAGGTATTAGTATGTAGATCTTTTTAAAAAAATGGTAAGCTTATTCTTATTTCTT</gDNA_template>
            <first_frame> K  T  *  A  Q  *  P  Y  L  L  I  I  L  F  Q  L  S  F  S  N  L  E  C  *  D  I  V  L  P  W  I  I  L  S  R  K  I  L  K  L  S  Q  A  V  R  R  K  *  N  S  E  P  A  L  F  M  L  W  R  K  *  R  S  *  S  V  K  R  L  G  S  R :   C  *  V  L  N  W  I  S  G  Y  G  L  L  A  Y  N  A  H  L  F  N  T  I  G  H  S  L  S  I  I  D  Y  S  N  *  A  P  F  S  L  Q  S  C  I  Q  L  W  S  *  F  W  D  F  D  I  S  T  S  R  C  N  S  T  E  I  I  Q  D  Y  F  L  L  L  V  V  N  L  L  F  S  R  S  A  E  E  R  L  I  I  R  L  C  S  T  L  Y  N  V  D  G  L  N  T  R  A  V  W  L  E  L  W  M  Y  S  F  R  *  N  L  V  *  D  E  L  L  V  I  Q  I  L  V  I  *  D  L  I  M  H  I  Y  *  S  *  K  I  *  L  D  R  Y  *  Y  V  D  L  F  K  K  M  V  S  L  F  L  F  L </first_frame>
            <second_frame>  R  H  K  L  N  N  H  I  C  *  L  Y  C  S  S  C  P  S  A  T  W  S  A  E  I  S  F  F  P  G  *  Y  Y  Q  E  K  Y  *  N  C  L  R  Q  *  G  G  S  R  T  P  S  L  L  C  L  C  C  G  E  N  K  G  V  D  Q  *  K  D  W  E  A   : G  V  E  C  *  T  G  S  L  V  M  G  F  W  H  T  M  P  I  S  S  T  P  S  D  T  L  Y  L  L  L  T  I  V  I  K  L  H  F  H  C  S  L  A  Y  N  Y  G  L  D  F  G  I  L  T  F  P  R  L  D  V  T  V  Q  K  L  Y  R  I  I  F  S  S  W  W  *  I  Y  F  F  Q  G  V  Q  R  R  G  *  L  S  V  Y  A  V  P  C  I  M  L  M  G  S  T  L  G  L  F  G  *  S  Y  G  C  I  R  L  D  R  I  *  C  R  M  S  Y  *  L  F  K  Y  *  L  Y  K  I  *  L  C  T  Y  I  S  H  E  R  F  S  *  I  G  I  S  M  *  I  F  L  K  K  W  *  A  Y  S  Y  F   </second_frame>
            <third_frame>   D  I  S  S  I  T  I  F  A  D  Y  I  V  P  A  V  L  Q  Q  L  G  V  L  R  Y  R  S  S  L  D  N  I  I  K  K  N  T  E  I  V  S  G  S  E  E  E  V  E  L  R  A  C  S  V  Y  A  V  E  K  I  K  E  L  I  S  K  K  T  G  K  Q  :  V  L  S  V  E  L  D  L  W  L  W  A  F  G  I  Q  C  P  S  L  Q  H  H  R  T  L  S  I  Y  Y  *  L  *  *  L  S  S  I  F  I  A  V  L  H  T  I  M  V  L  I  L  G  F  *  H  F  H  V  *  M  *  Q  Y  R  N  Y  T  G  L  F  S  P  L  G  G  E  F  T  F  F  K  E  C  R  G  E  V  D  Y  P  F  M  Q  Y  L  V  *  C  *  W  A  Q  H  S  G  C  L  V  R  V  M  D  V  F  V  *  I  E  F  S  V  G  *  V  I  S  Y  S  N  I  S  Y  I  R  F  N  Y  A  H  I  L  V  M  K  D  L  V  R  *  V  L  V  C  R  S  F  *  K  N  G  K  L  I  L  I  S  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0053H21.1" strand="+"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="5757" stop="5969"/>
                    <exon start="7102" stop="7194"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>303</number_coding_nucleotides>
                  <number_encoded_amino_acids>101</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DISSITIFADYIVPAVLQQLGVLRYRSSLDNIIKKNTEIVSGSEEEVELRACSVYAVEKIKELISKKTGKQVLSVELDLWLWAFGIQCPSLQHHRTLSIYY*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0053H21.1" strand="+"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="7250" stop="7453"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>201</number_coding_nucleotides>
                  <number_encoded_amino_acids>67</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FWDFDISTSRCNSTEIIQDYFLLLVVNLLFSRSAEERLIIRLCSTLYNVDGLNTRAVWLELWMYSFR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="+" PGL_start="14483" PGL_stop="15756"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="14483" e_stop="14589"/>
            <exon e_start="14679" e_stop="14749"/>
            <exon e_start="14850" e_stop="14948"/>
            <exon e_start="15378" e_stop="15756"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.730" acc_prob="0.940" e_score="0.991"/>
          <exon-intron don_prob="0.647" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.986" acc_prob="0.570" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.991">
            <gDNA_exon_boundary e_start="14483" e_stop="14589" e_length="107"/>
          </exon>
          <intron i_serial="1" don_prob="0.730" acc_prob="0.940">
            <gDNA_intron_boundary i_start="14590" i_stop="14678" i_length="89"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="14679" e_stop="14749" e_length="71"/>
          </exon>
          <intron i_serial="2" don_prob="0.647" acc_prob="0.000">
            <gDNA_intron_boundary i_start="14750" i_stop="14849" i_length="100"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="14850" e_stop="14948" e_length="99"/>
          </exon>
          <intron i_serial="3" don_prob="0.986" acc_prob="0.570">
            <gDNA_intron_boundary i_start="14949" i_stop="15377" i_length="429"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="15378" e_stop="15756" e_length="379"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="14483" stop="14589"/>
              <exon start="14679" stop="14749"/>
              <exon start="14850" stop="14948"/>
              <exon start="15378" stop="15756"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U600879" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCAGGATTCGTCTGAGTTTCCTTATCAAATTTAATGCAAACGATGGTTCATTTTAGCTCTCAGGATACATCTCAGGTCAATGTGTAGTCAACGTTTACACAGTGAAG : GTCCTTCTATATTTCTGATCCACTTATTTCCGTATATTTTCTGGACAAAGAAAACGGAAACCTAATGTTTG : TTTGAACTTAGTCTCCTAGTTTTTACTTATCAATCATTCCTGAACTGATAAGAGCATGGGGAGTCAATAGATGTACACGAGACGGGGAGTCAAAAGAAG : AGTGGTACTGGACATAGAATCTGAAGAATCTAGGATACTATACTCAATCTCACCCTGGTGTCTCGCATTTTATTGATGTTCCATTGGTTCCTGATACCACTGATAAATGCTGTCTTGGAGGGTGCCAAAGTTCTCCAACAGTTTGATAAGAAGTTAATTCCGATTGTGTCAAACACAACGCTTGCTATAATTGATCAGGTCTATTCTGGCCTTTGCATAGTCCAATATGGCCATACTCGGTTTCTCATGAATTTCCTTATAATACATTGTAGTCTATAGTATTGCATGGACTACTTTAACTATGGTTTCGTATGCTTCATGTACATCAGCAACATCAAAATACAACATCAAAATACAGCCATTCCGATAATATGCATGC</gDNA_template>
            <first_frame> S  G  F  V  *  V  S  L  S  N  L  M  Q  T  M  V  H  F  S  S  Q  D  T  S  Q  V  N  V  *  S  T  F  T  Q  *  R :   S  F  Y  I  S  D  P  L  I  S  V  Y  F  L  D  K  E  N  G  N  L  M  F   : V  *  T  *  S  P  S  F  Y  L  S  I  I  P  E  L  I  R  A  W  G  V  N  R  C  T  R  D  G  E  S  K  E   : E  W  Y  W  T  *  N  L  K  N  L  G  Y  Y  T  Q  S  H  P  G  V  S  H  F  I  D  V  P  L  V  P  D  T  T  D  K  C  C  L  G  G  C  Q  S  S  P  T  V  *  *  E  V  N  S  D  C  V  K  H  N  A  C  Y  N  *  S  G  L  F  W  P  L  H  S  P  I  W  P  Y  S  V  S  H  E  F  P  Y  N  T  L  *  S  I  V  L  H  G  L  L  *  L  W  F  R  M  L  H  V  H  Q  Q  H  Q  N  T  T  S  K  Y  S  H  S  D  N  M  H   </first_frame>
            <second_frame>  Q  D  S  S  E  F  P  Y  Q  I  *  C  K  R  W  F  I  L  A  L  R  I  H  L  R  S  M  C  S  Q  R  L  H  S  E   : G  P  S  I  F  L  I  H  L  F  P  Y  I  F  W  T  K  K  T  E  T  *  C  L  :  F  E  L  S  L  L  V  F  T  Y  Q  S  F  L  N  *  *  E  H  G  E  S  I  D  V  H  E  T  G  S  Q  K  K  :  S  G  T  G  H  R  I  *  R  I  *  D  T  I  L  N  L  T  L  V  S  R  I  L  L  M  F  H  W  F  L  I  P  L  I  N  A  V  L  E  G  A  K  V  L  Q  Q  F  D  K  K  L  I  P  I  V  S  N  T  T  L  A  I  I  D  Q  V  Y  S  G  L  C  I  V  Q  Y  G  H  T  R  F  L  M  N  F  L  I  I  H  C  S  L  *  Y  C  M  D  Y  F  N  Y  G  F  V  C  F  M  Y  I  S  N  I  K  I  Q  H  Q  N  T  A  I  P  I  I  C  M  </second_frame>
            <third_frame>   R  I  R  L  S  F  L  I  K  F  N  A  N  D  G  S  F  *  L  S  G  Y  I  S  G  Q  C  V  V  N  V  Y  T  V  K  :  V  L  L  Y  F  *  S  T  Y  F  R  I  F  S  G  Q  R  K  R  K  P  N  V  C :   L  N  L  V  S  *  F  L  L  I  N  H  S  *  T  D  K  S  M  G  S  Q  *  M  Y  T  R  R  G  V  K  R  R :   V  V  L  D  I  E  S  E  E  S  R  I  L  Y  S  I  S  P  W  C  L  A  F  Y  *  C  S  I  G  S  *  Y  H  *  *  M  L  S  W  R  V  P  K  F  S  N  S  L  I  R  S  *  F  R  L  C  Q  T  Q  R  L  L  *  L  I  R  S  I  L  A  F  A  *  S  N  M  A  I  L  G  F  S  *  I  S  L  *  Y  I  V  V  Y  S  I  A  W  T  T  L  T  M  V  S  Y  A  S  C  T  S  A  T  S  K  Y  N  I  K  I  Q  P  F  R  *  Y  A  C </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0053H21.1" strand="+"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="15411" stop="15656"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>243</number_coding_nucleotides>
                  <number_encoded_amino_acids>81</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DTILNLTLVSRILLMFHWFLIPLINAVLEGAKVLQQFDKKLIPIVSNTTLAIIDQVYSGLCIVQYGHTRFLMNFLIIHCSL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="+" PGL_start="16748" PGL_stop="25373"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="16748" e_stop="16973"/>
            <exon e_start="25149" e_stop="25373"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.882" acc_prob="0.999" e_score="0.991"/>
          <exon-only e_score="0.987"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.991">
            <gDNA_exon_boundary e_start="16748" e_stop="16973" e_length="226"/>
          </exon>
          <intron i_serial="1" don_prob="0.882" acc_prob="0.999">
            <gDNA_intron_boundary i_start="16974" i_stop="25148" i_length="8175"/>
          </intron>
          <exon e_serial="2" e_score="0.987">
            <gDNA_exon_boundary e_start="25149" e_stop="25373" e_length="225"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16748" stop="16973"/>
              <exon start="25149" stop="25373"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U602640" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTTTTTTAAGGTATTCCTATTTTCCTTGACCCTTGTAATGCAGATATCAATTCCAAAGGACCATACATAAATTACTTGATTACATAGCTATGAGTTTTGACGGTGCTTTTGACATTGAGAAGCAAAGTAGATCTCGGATATATCCACTTTTTTGTTGAACCGCAACTGCCCAAGATCTTTGTATGATTCGACTTTGGAGCCTTCAAAGACCTCTGTGGTATTTAAG : AGCTTCGTGAAGCGGAGATGGAATTGGGGAGAGATCAAATAGCCCTAGCTAGATTCTCAAGCTTGGATTCACCCGAAAAGGTCGAAAAGCCCTTCTTTAAGCTTTCTTATTCGCTTTTTAGCGCATAACTTACTCTCTCACTTATATTCAAGATACATGGTATTTGTTCAAAGTTCATGATAAGTTAGAATATGGTTAGGATTTTTCCACCAATTGGACTATCTG</gDNA_template>
            <first_frame> V  F  *  G  I  P  I  F  L  D  P  C  N  A  D  I  N  S  K  G  P  Y  I  N  Y  L  I  T  *  L  *  V  L  T  V  L  L  T  L  R  S  K  V  D  L  G  Y  I  H  F  F  V  E  P  Q  L  P  K  I  F  V  *  F  D  F  G  A  F  K  D  L  C  G  I  *   : E  L  R  E  A  E  M  E  L  G  R  D  Q  I  A  L  A  R  F  S  S  L  D  S  P  E  K  V  E  K  P  F  F  K  L  S  Y  S  L  F  S  A  *  L  T  L  S  L  I  F  K  I  H  G  I  C  S  K  F  M  I  S  *  N  M  V  R  I  F  P  P  I  G  L  S  </first_frame>
            <second_frame>  F  F  K  V  F  L  F  S  L  T  L  V  M  Q  I  S  I  P  K  D  H  T  *  I  T  *  L  H  S  Y  E  F  *  R  C  F  *  H  *  E  A  K  *  I  S  D  I  S  T  F  L  L  N  R  N  C  P  R  S  L  Y  D  S  T  L  E  P  S  K  T  S  V  V  F  K  :  S  F  V  K  R  R  W  N  W  G  E  I  K  *  P  *  L  D  S  Q  A  W  I  H  P  K  R  S  K  S  P  S  L  S  F  L  I  R  F  L  A  H  N  L  L  S  H  L  Y  S  R  Y  M  V  F  V  Q  S  S  *  *  V  R  I  W  L  G  F  F  H  Q  L  D  Y  L </second_frame>
            <third_frame>   F  L  R  Y  S  Y  F  P  *  P  L  *  C  R  Y  Q  F  Q  R  T  I  H  K  L  L  D  Y  I  A  M  S  F  D  G  A  F  D  I  E  K  Q  S  R  S  R  I  Y  P  L  F  C  *  T  A  T  A  Q  D  L  C  M  I  R  L  W  S  L  Q  R  P  L  W  Y  L  R :   A  S  *  S  G  D  G  I  G  E  R  S  N  S  P  S  *  I  L  K  L  G  F  T  R  K  G  R  K  A  L  L  *  A  F  L  F  A  F  *  R  I  T  Y  S  L  T  Y  I  Q  D  T  W  Y  L  F  K  V  H  D  K  L  E  Y  G  *  D  F  S  T  N  W  T  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02SLe0053H21.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="-" PGL_start="22257" PGL_stop="18476"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="22257" e_stop="22251"/>
            <exon e_start="22144" e_stop="22037"/>
            <exon e_start="20504" e_stop="20288"/>
            <exon e_start="18887" e_stop="18476"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.934" acc_prob="0.968" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.944" e_score="1.000"/>
          <exon-intron don_prob="0.914" acc_prob="0.322" e_score="1.000"/>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="22257" e_stop="22251" e_length="7"/>
          </exon>
          <intron i_serial="1" don_prob="0.934" acc_prob="0.968">
            <gDNA_intron_boundary i_start="22250" i_stop="22145" i_length="106"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="22144" e_stop="22037" e_length="108"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.944">
            <gDNA_intron_boundary i_start="22036" i_stop="20505" i_length="1532"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="20504" e_stop="20288" e_length="217"/>
          </exon>
          <intron i_serial="3" don_prob="0.914" acc_prob="0.322">
            <gDNA_intron_boundary i_start="20287" i_stop="18888" i_length="1400"/>
          </intron>
          <exon e_serial="4" e_score="0.998">
            <gDNA_exon_boundary e_start="18887" e_stop="18476" e_length="412"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="22257" stop="22251"/>
              <exon start="22144" stop="22037"/>
              <exon start="20504" stop="20288"/>
              <exon start="18887" stop="18476"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U574584" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GGAACAG : GTTTATCTTTTACTTTCGTGCTGTCCATGCGAAGGAAGGATTTCAGGAATTGTTGATGCCCCCAATGCTGTTGCCACCCTTGCCATCCCAACAGCTATTTTTGACCAG : GATATTCGCCCAAAGGTCAATAAAGTGCCCCTTGGGCCAAGGCTTATAAGGAATCCAGGAATTCCACAATGTACTTATGATGGAAACCTGCCAATCACCAAAAATCCTTTGCTCCATCAACAAGGGAGCAGCTGCAACATGGATGCTAGCTCTTGAGCATGGTATATGCATGTACAGCTACTGCTGGAATTGTATGACCAAGTTGAAAGAAGCAAAG : ATTAGTCTAGTTCATGAAGTCATCTATCTGCAAATTAGGAAATAATTGTTCTAGCTGAAGTATACGGATCACACTGTTGGGATGACAACTGTATAAGCTCCGAGCAGATAGCTTCTGCAGAATGATGTAGTCTCCATACTGCTCAAGTTGCTGCATGATAGAAAAGAACATTAATTAGTTGTACACCTTTTCTGTCATCATTGATTATAACACAAACAAGCACTCAAGGAAAAATTGCCTGGTATGAGCTATGTTTCTCGGACTCTTCAAAAATGTCATCGAGTGCGTGTCAGATCCTTCAAAAGTGGTGCAATTTTGGAGGAGTCCACATGGGTGCAGCAACATATTTGGAGAGTCTGAGCAACTTAGGGTATGAGCGGCACATCATGAAGACATAAACATTCTTAACATA</gDNA_template>
            <first_frame> G  T   : G  L  S  F  T  F  V  L  S  M  R  R  K  D  F  R  N  C  *  C  P  Q  C  C  C  H  P  C  H  P  N  S  Y  F  *  P   : G  Y  S  P  K  G  Q  *  S  A  P  W  A  K  A  Y  K  E  S  R  N  S  T  M  Y  L  *  W  K  P  A  N  H  Q  K  S  F  A  P  S  T  R  E  Q  L  Q  H  G  C  *  L  L  S  M  V  Y  A  C  T  A  T  A  G  I  V  *  P  S  *  K  K  Q  R :   L  V  *  F  M  K  S  S  I  C  K  L  G  N  N  C  S  S  *  S  I  R  I  T  L  L  G  *  Q  L  Y  K  L  R  A  D  S  F  C  R  M  M  *  S  P  Y  C  S  S  C  C  M  I  E  K  N  I  N  *  L  Y  T  F  S  V  I  I  D  Y  N  T  N  K  H  S  R  K  N  C  L  V  *  A  M  F  L  G  L  F  K  N  V  I  E  C  V  S  D  P  S  K  V  V  Q  F  W  R  S  P  H  G  C  S  N  I  F  G  E  S  E  Q  L  R  V  *  A  A  H  H  E  D  I  N  I  L  N  I </first_frame>
            <second_frame>  E  Q  :  V  Y  L  L  L  S  C  C  P  C  E  G  R  I  S  G  I  V  D  A  P  N  A  V  A  T  L  A  I  P  T  A  I  F  D  Q  :  D  I  R  P  K  V  N  K  V  P  L  G  P  R  L  I  R  N  P  G  I  P  Q  C  T  Y  D  G  N  L  P  I  T  K  N  P  L  L  H  Q  Q  G  S  S  C  N  M  D  A  S  S  *  A  W  Y  M  H  V  Q  L  L  L  E  L  Y  D  Q  V  E  R  S  K   : D  *  S  S  S  *  S  H  L  S  A  N  *  E  I  I  V  L  A  E  V  Y  G  S  H  C  W  D  D  N  C  I  S  S  E  Q  I  A  S  A  E  *  C  S  L  H  T  A  Q  V  A  A  *  *  K  R  T  L  I  S  C  T  P  F  L  S  S  L  I  I  T  Q  T  S  T  Q  G  K  I  A  W  Y  E  L  C  F  S  D  S  S  K  M  S  S  S  A  C  Q  I  L  Q  K  W  C  N  F  G  G  V  H  M  G  A  A  T  Y  L  E  S  L  S  N  L  G  Y  E  R  H  I  M  K  T  *  T  F  L  T   </second_frame>
            <third_frame>   N  R :   F  I  F  Y  F  R  A  V  H  A  K  E  G  F  Q  E  L  L  M  P  P  M  L  L  P  P  L  P  S  Q  Q  L  F  L  T  R :   I  F  A  Q  R  S  I  K  C  P  L  G  Q  G  L  *  G  I  Q  E  F  H  N  V  L  M  M  E  T  C  Q  S  P  K  I  L  C  S  I  N  K  G  A  A  A  T  W  M  L  A  L  E  H  G  I  C  M  Y  S  Y  C  W  N  C  M  T  K  L  K  E  A  K  :  I  S  L  V  H  E  V  I  Y  L  Q  I  R  K  *  L  F  *  L  K  Y  T  D  H  T  V  G  M  T  T  V  *  A  P  S  R  *  L  L  Q  N  D  V  V  S  I  L  L  K  L  L  H  D  R  K  E  H  *  L  V  V  H  L  F  C  H  H  *  L  *  H  K  Q  A  L  K  E  K  L  P  G  M  S  Y  V  S  R  T  L  Q  K  C  H  R  V  R  V  R  S  F  K  S  G  A  I  L  E  E  S  T  W  V  Q  Q  H  I  W  R  V  *  A  T  *  G  M  S  G  T  S  *  R  H  K  H  S  *  H  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0053H21.1" strand="-"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="22256" stop="22251"/>
                    <exon start="22144" stop="22037"/>
                    <exon start="20504" stop="20349"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>267</number_coding_nucleotides>
                  <number_encoded_amino_acids>89</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EQVYLLLSCCPCEGRISGIVDAPNAVATLAIPTAIFDQDIRPKVNKVPLGPRLIRNPGIPQCTYDGNLPITKNPLLHQQGSSCNMDASS*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0053H21.1" strand="-"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="18726" stop="18490"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>234</number_coding_nucleotides>
                  <number_encoded_amino_acids>78</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KRTLISCTPFLSSLIITQTSTQGKIAWYELCFSDSSKMSSSACQILQKWCNFGGVHMGAATYLESLSNLGYERHIMKT*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0053H21.1" strand="-"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="20455" stop="20288"/>
                    <exon start="18887" stop="18843"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>210</number_coding_nucleotides>
                  <number_encoded_amino_acids>70</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GIQEFHNVLMMETCQSPKILCSINKGAAATWMLALEHGICMYSYCWNCMTKLKEAKISLVHEVIYLQIRK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="21645" e_stop="21356"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="21645" e_stop="21356" e_length="290"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21645" stop="21356"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U570534" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GGAATTGGTGAAATTGTTCAGTTATCTGAAGTAGATCAATCAGTAAAATATCTTTCACCAGATTAAGCTAGAGGCAATAAATATCCGCAAGAACAATTCTAAGAAGCTCATGGAAGTCAGTAGGAAGCACACATGGAAGAAACCATAGACGAATGAGCTAACCAAAGTCAATGTTCCTCTACAATCTTATGTCCAATGTTCTTTAAAAGAAATATTCTGCATGTACGAACTCTGGAGATAACCAAGTTTATCTCATGTCCAATGTTCTTTTAAAAGAAATATTTTCCATA</gDNA_template>
            <first_frame> G  I  G  E  I  V  Q  L  S  E  V  D  Q  S  V  K  Y  L  S  P  D  *  A  R  G  N  K  Y  P  Q  E  Q  F  *  E  A  H  G  S  Q  *  E  A  H  M  E  E  T  I  D  E  *  A  N  Q  S  Q  C  S  S  T  I  L  C  P  M  F  F  K  R  N  I  L  H  V  R  T  L  E  I  T  K  F  I  S  C  P  M  F  F  *  K  K  Y  F  P   </first_frame>
            <second_frame>  E  L  V  K  L  F  S  Y  L  K  *  I  N  Q  *  N  I  F  H  Q  I  K  L  E  A  I  N  I  R  K  N  N  S  K  K  L  M  E  V  S  R  K  H  T  W  K  K  P  *  T  N  E  L  T  K  V  N  V  P  L  Q  S  Y  V  Q  C  S  L  K  E  I  F  C  M  Y  E  L  W  R  *  P  S  L  S  H  V  Q  C  S  F  K  R  N  I  F  H  </second_frame>
            <third_frame>   N  W  *  N  C  S  V  I  *  S  R  S  I  S  K  I  S  F  T  R  L  S  *  R  Q  *  I  S  A  R  T  I  L  R  S  S  W  K  S  V  G  S  T  H  G  R  N  H  R  R  M  S  *  P  K  S  M  F  L  Y  N  L  M  S  N  V  L  *  K  K  Y  S  A  C  T  N  S  G  D  N  Q  V  Y  L  M  S  N  V  L  L  K  E  I  F  S  I </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02SLe0053H21.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="-" PGL_start="24589" PGL_stop="23227"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="24589" e_stop="24368"/>
            <exon e_start="24252" e_stop="24015"/>
            <exon e_start="23927" e_stop="23737"/>
            <exon e_start="23462" e_stop="23227"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.852" acc_prob="0.993" e_score="0.995"/>
          <exon-intron don_prob="1.000" acc_prob="0.970" e_score="1.000"/>
          <exon-intron don_prob="0.962" acc_prob="0.997" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.995">
            <gDNA_exon_boundary e_start="24589" e_stop="24368" e_length="222"/>
          </exon>
          <intron i_serial="1" don_prob="0.852" acc_prob="0.993">
            <gDNA_intron_boundary i_start="24367" i_stop="24253" i_length="115"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="24252" e_stop="24015" e_length="238"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="0.970">
            <gDNA_intron_boundary i_start="24014" i_stop="23928" i_length="87"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="23927" e_stop="23737" e_length="191"/>
          </exon>
          <intron i_serial="3" don_prob="0.962" acc_prob="0.997">
            <gDNA_intron_boundary i_start="23736" i_stop="23463" i_length="274"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="23462" e_stop="23227" e_length="236"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24589" stop="24368"/>
              <exon start="24252" stop="24015"/>
              <exon start="23927" stop="23737"/>
              <exon start="23462" stop="23227"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U572965" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ACCATGGCTCCTCCAACTCCAAGACTAGTAATCCCCATAGACCTAAAGAAAAAGCCATGGCAACAAAAGTTGCCACTCCACAACCGTTGGCACCCAGAGATACCTCCTGTAACAGAGATTAAAACAGGGGAGATGTTCCGAATTGAGATGGTTGATTGGACAGCAGGCTCTATCCAAGATAATAACTCTGCAATTGATGTAAAAACCGTTGATCTATCCACT : GTGCATTATCTCAGTGGGCCAATACGAGTCGTTGACACAGATGGAAATCCTGCTGAACCAGGTGATCTCCTTGCTGTTGAAATATGCAACTTAGGGCCTCTCCCTGGAGATGAATGGGGTTTTACAGCAATATTCGACAGAGAGAACGGTGGAGGATTTCTAACAGACCATTTTCCCCGTGCAACTAAAGCTATTTGGTATTTCGAAGGCATATATGCCTACTCACCTCATATACCAG : GTGTAAGATTTCCTGGTTTAATTCATCCTGGAATAATTGGAACAGCGCCTTCAAAAGAACTACTCAATATATGGAATGAGAGGGAAAGAAAGCTCGAAGAAACAGGTCCCCGATCTCTCAAATTATGTGAGGTCTTGCATTCTAGACCATTGGCTAACCTACCTTCAACAAAAGGGTGCATTCTTGGCAAG : ATTCAAGATGGAACTCCTGAGTGGATTAGAATTGCCAACGAGGCTGCAAGAACAATACCTGGACGTGAAAATGGAGGAAACTGTGACATCAAAAATCTCAGCAGAGGTTCAAAAATATACCTTCCAGTATTTGTAGAAGGAGCAAACCTCAGTACTGGTGATATGCATTTTTCTCAAGGTGACGGTGAAGTATCATTTTGTGGGGCAATTGAGATGAGTGGCTTCCTAGAGCTCAA</gDNA_template>
            <first_frame> T  M  A  P  P  T  P  R  L  V  I  P  I  D  L  K  K  K  P  W  Q  Q  K  L  P  L  H  N  R  W  H  P  E  I  P  P  V  T  E  I  K  T  G  E  M  F  R  I  E  M  V  D  W  T  A  G  S  I  Q  D  N  N  S  A  I  D  V  K  T  V  D  L  S  T  :  V  H  Y  L  S  G  P  I  R  V  V  D  T  D  G  N  P  A  E  P  G  D  L  L  A  V  E  I  C  N  L  G  P  L  P  G  D  E  W  G  F  T  A  I  F  D  R  E  N  G  G  G  F  L  T  D  H  F  P  R  A  T  K  A  I  W  Y  F  E  G  I  Y  A  Y  S  P  H  I  P   : G  V  R  F  P  G  L  I  H  P  G  I  I  G  T  A  P  S  K  E  L  L  N  I  W  N  E  R  E  R  K  L  E  E  T  G  P  R  S  L  K  L  C  E  V  L  H  S  R  P  L  A  N  L  P  S  T  K  G  C  I  L  G  K  :  I  Q  D  G  T  P  E  W  I  R  I  A  N  E  A  A  R  T  I  P  G  R  E  N  G  G  N  C  D  I  K  N  L  S  R  G  S  K  I  Y  L  P  V  F  V  E  G  A  N  L  S  T  G  D  M  H  F  S  Q  G  D  G  E  V  S  F  C  G  A  I  E  M  S  G  F  L  E  L   </first_frame>
            <second_frame>  P  W  L  L  Q  L  Q  D  *  *  S  P  *  T  *  R  K  S  H  G  N  K  S  C  H  S  T  T  V  G  T  Q  R  Y  L  L  *  Q  R  L  K  Q  G  R  C  S  E  L  R  W  L  I  G  Q  Q  A  L  S  K  I  I  T  L  Q  L  M  *  K  P  L  I  Y  P  L :   C  I  I  S  V  G  Q  Y  E  S  L  T  Q  M  E  I  L  L  N  Q  V  I  S  L  L  L  K  Y  A  T  *  G  L  S  L  E  M  N  G  V  L  Q  Q  Y  S  T  E  R  T  V  E  D  F  *  Q  T  I  F  P  V  Q  L  K  L  F  G  I  S  K  A  Y  M  P  T  H  L  I  Y  Q  :  V  *  D  F  L  V  *  F  I  L  E  *  L  E  Q  R  L  Q  K  N  Y  S  I  Y  G  M  R  G  K  E  S  S  K  K  Q  V  P  D  L  S  N  Y  V  R  S  C  I  L  D  H  W  L  T  Y  L  Q  Q  K  G  A  F  L  A  R :   F  K  M  E  L  L  S  G  L  E  L  P  T  R  L  Q  E  Q  Y  L  D  V  K  M  E  E  T  V  T  S  K  I  S  A  E  V  Q  K  Y  T  F  Q  Y  L  *  K  E  Q  T  S  V  L  V  I  C  I  F  L  K  V  T  V  K  Y  H  F  V  G  Q  L  R  *  V  A  S  *  S  S  </second_frame>
            <third_frame>   H  G  S  S  N  S  K  T  S  N  P  H  R  P  K  E  K  A  M  A  T  K  V  A  T  P  Q  P  L  A  P  R  D  T  S  C  N  R  D  *  N  R  G  D  V  P  N  *  D  G  *  L  D  S  R  L  Y  P  R  *  *  L  C  N  *  C  K  N  R  *  S  I  H   : C  A  L  S  Q  W  A  N  T  S  R  *  H  R  W  K  S  C  *  T  R  *  S  P  C  C  *  N  M  Q  L  R  A  S  P  W  R  *  M  G  F  Y  S  N  I  R  Q  R  E  R  W  R  I  S  N  R  P  F  S  P  C  N  *  S  Y  L  V  F  R  R  H  I  C  L  L  T  S  Y  T  R :   C  K  I  S  W  F  N  S  S  W  N  N  W  N  S  A  F  K  R  T  T  Q  Y  M  E  *  E  G  K  K  A  R  R  N  R  S  P  I  S  Q  I  M  *  G  L  A  F  *  T  I  G  *  P  T  F  N  K  R  V  H  S  W  Q   : D  S  R  W  N  S  *  V  D  *  N  C  Q  R  G  C  K  N  N  T  W  T  *  K  W  R  K  L  *  H  Q  K  S  Q  Q  R  F  K  N  I  P  S  S  I  C  R  R  S  K  P  Q  Y  W  *  Y  A  F  F  S  R  *  R  *  S  I  I  L  W  G  N  *  D  E  W  L  P  R  A  Q </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0053H21.1" strand="-"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="24589" stop="24368"/>
                    <exon start="24252" stop="24015"/>
                    <exon start="23927" stop="23737"/>
                    <exon start="23462" stop="23229"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>885</number_coding_nucleotides>
                  <number_encoded_amino_acids>295</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TMAPPTPRLVIPIDLKKKPWQQKLPLHNRWHPEIPPVTEIKTGEMFRIEMVDWTAGSIQDNNSAIDVKTVDLSTVHYLSGPIRVVDTDGNPAEPGDLLAVEICNLGPLPGDEWGFTAIFDRENGGGFLTDHFPRATKAIWYFEGIYAYSPHIPGVRFPGLIHPGIIGTAPSKELLNIWNERERKLEETGPRSLKLCEVLHSRPLANLPSTKGCILGKIQDGTPEWIRIANEAARTIPGRENGGNCDIKNLSRGSKIYLPVFVEGANLSTGDMHFSQGDGEVSFCGAIEMSGFLEL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="+" PGL_start="25501" PGL_stop="26507"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="25501" e_stop="26507"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.999"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.999">
            <gDNA_exon_boundary e_start="25501" e_stop="26507" e_length="1007"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25501" stop="26507"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U565427" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAAAGTTTTATCGTGTTATCTAGATTAAATTCTAGTGTGATGACTTGATTTAACCTTTGATTTATCTTTAGTGATTTAACAGAGATACATCAGTTGCATTCACCAAGAAACAGTGCAAAAAGAAGTGTTATTTTTCACAAGTATCATCATTTTGAGGACAGAAATAATGGTCCTAAAGCTAATCCTGGACCTAATTGCCTTTTGTAGAGGACCCACAAATCAAAATCTTTAGGATTTGCCAATATCTTTTGATGGCTTCACTTCACTGCAAGTGCTTGGTTTTTTGTCTGCCCACAAGGATGATGGTCCCTCAACGGCTGAACGTAGTCTTGTGGTACTCATCTCTGAGAATACTTTTCTACATATCACATATGTGGTTGCAATGTCTTCAATCAAGAAAGGAAATGACTTCACTCATGTTCCGTAGTTTGATTGGGACATCTTCACTTGAAAAATGTTACTCAAGGTACTTTCTATCCTGGTGGTAGCCAGTGTGAGAAGTGTTCCCCTCGTATCAATTAGGTGAACTTCATACAAAATCCTTGGTACTTACTATATTTGAATGCAGATGCACGAATCACACTAGTCATATTGTGCACTCAGGCCACTAGCCAGTGCTGAAGTTGAACTTTAGTGATTCCTGTTTGTGTAGATTATATCTATCCATTTGACATTAACTGTTTGAAGAAGTTGCAACAGTGTCCAGCAACTGGGGATCATTCCAAAAATAGGTGATTCCATGAACTGGGAGATTGCTATTTGATATGCTTGATGTCAATCTGCATCATCTTTTGGCCAAGGAGAAAAATTATTTAAGTAGAATTAACCTATAACTTCTCACCCAACTGCTTGAACTAAAAATAGTACGTGCCATATATGTATAATATGTACTACCTCCGTTCATGTTTAATTGTCATGATTTCTATTTTTAGAGTCAAACTATAAGAACTTTGACAAAAATTTTAAAACGTATCTTTATCATATTGATATGGAAAAAATTATAACTT</gDNA_template>
            <first_frame> K  S  F  I  V  L  S  R  L  N  S  S  V  M  T  *  F  N  L  *  F  I  F  S  D  L  T  E  I  H  Q  L  H  S  P  R  N  S  A  K  R  S  V  I  F  H  K  Y  H  H  F  E  D  R  N  N  G  P  K  A  N  P  G  P  N  C  L  L  *  R  T  H  K  S  K  S  L  G  F  A  N  I  F  *  W  L  H  F  T  A  S  A  W  F  F  V  C  P  Q  G  *  W  S  L  N  G  *  T  *  S  C  G  T  H  L  *  E  Y  F  S  T  Y  H  I  C  G  C  N  V  F  N  Q  E  R  K  *  L  H  S  C  S  V  V  *  L  G  H  L  H  L  K  N  V  T  Q  G  T  F  Y  P  G  G  S  Q  C  E  K  C  S  P  R  I  N  *  V  N  F  I  Q  N  P  W  Y  L  L  Y  L  N  A  D  A  R  I  T  L  V  I  L  C  T  Q  A  T  S  Q  C  *  S  *  T  L  V  I  P  V  C  V  D  Y  I  Y  P  F  D  I  N  C  L  K  K  L  Q  Q  C  P  A  T  G  D  H  S  K  N  R  *  F  H  E  L  G  D  C  Y  L  I  C  L  M  S  I  C  I  I  F  W  P  R  R  K  I  I  *  V  E  L  T  Y  N  F  S  P  N  C  L  N  *  K  *  Y  V  P  Y  M  Y  N  M  Y  Y  L  R  S  C  L  I  V  M  I  S  I  F  R  V  K  L  *  E  L  *  Q  K  F  *  N  V  S  L  S  Y  *  Y  G  K  N  Y  N   </first_frame>
            <second_frame>  K  V  L  S  C  Y  L  D  *  I  L  V  *  *  L  D  L  T  F  D  L  S  L  V  I  *  Q  R  Y  I  S  C  I  H  Q  E  T  V  Q  K  E  V  L  F  F  T  S  I  I  I  L  R  T  E  I  M  V  L  K  L  I  L  D  L  I  A  F  C  R  G  P  T  N  Q  N  L  *  D  L  P  I  S  F  D  G  F  T  S  L  Q  V  L  G  F  L  S  A  H  K  D  D  G  P  S  T  A  E  R  S  L  V  V  L  I  S  E  N  T  F  L  H  I  T  Y  V  V  A  M  S  S  I  K  K  G  N  D  F  T  H  V  P  *  F  D  W  D  I  F  T  *  K  M  L  L  K  V  L  S  I  L  V  V  A  S  V  R  S  V  P  L  V  S  I  R  *  T  S  Y  K  I  L  G  T  Y  Y  I  *  M  Q  M  H  E  S  H  *  S  Y  C  A  L  R  P  L  A  S  A  E  V  E  L  *  *  F  L  F  V  *  I  I  S  I  H  L  T  L  T  V  *  R  S  C  N  S  V  Q  Q  L  G  I  I  P  K  I  G  D  S  M  N  W  E  I  A  I  *  Y  A  *  C  Q  S  A  S  S  F  G  Q  G  E  K  L  F  K  *  N  *  P  I  T  S  H  P  T  A  *  T  K  N  S  T  C  H  I  C  I  I  C  T  T  S  V  H  V  *  L  S  *  F  L  F  L  E  S  N  Y  K  N  F  D  K  N  F  K  T  Y  L  Y  H  I  D  M  E  K  I  I  T  </second_frame>
            <third_frame>   K  F  Y  R  V  I  *  I  K  F  *  C  D  D  L  I  *  P  L  I  Y  L  *  *  F  N  R  D  T  S  V  A  F  T  K  K  Q  C  K  K  K  C  Y  F  S  Q  V  S  S  F  *  G  Q  K  *  W  S  *  S  *  S  W  T  *  L  P  F  V  E  D  P  Q  I  K  I  F  R  I  C  Q  Y  L  L  M  A  S  L  H  C  K  C  L  V  F  C  L  P  T  R  M  M  V  P  Q  R  L  N  V  V  L  W  Y  S  S  L  R  I  L  F  Y  I  S  H  M  W  L  Q  C  L  Q  S  R  K  E  M  T  S  L  M  F  R  S  L  I  G  T  S  S  L  E  K  C  Y  S  R  Y  F  L  S  W  W  *  P  V  *  E  V  F  P  S  Y  Q  L  G  E  L  H  T  K  S  L  V  L  T  I  F  E  C  R  C  T  N  H  T  S  H  I  V  H  S  G  H  *  P  V  L  K  L  N  F  S  D  S  C  L  C  R  L  Y  L  S  I  *  H  *  L  F  E  E  V  A  T  V  S  S  N  W  G  S  F  Q  K  *  V  I  P  *  T  G  R  L  L  F  D  M  L  D  V  N  L  H  H  L  L  A  K  E  K  N  Y  L  S  R  I  N  L  *  L  L  T  Q  L  L  E  L  K  I  V  R  A  I  Y  V  *  Y  V  L  P  P  F  M  F  N  C  H  D  F  Y  F  *  S  Q  T  I  R  T  L  T  K  I  L  K  R  I  F  I  I  L  I  W  K  K  L  *  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0053H21.1" strand="+"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="25695" stop="25988"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>291</number_coding_nucleotides>
                  <number_encoded_amino_acids>97</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LPFVEDPQIKIFRICQYLLMASLHCKCLVFCLPTRMMVPQRLNVVLWYSSLRILFYISHMWLQCLQSRKEMTSLMFRSLIGTSSLEKCYSRYFLSWW*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="+" PGL_start="29560" PGL_stop="30727"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="29560" e_stop="29937"/>
            <exon e_start="30016" e_stop="30727"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="1.000" e_score="0.979"/>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.979">
            <gDNA_exon_boundary e_start="29560" e_stop="29937" e_length="378"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="1.000">
            <gDNA_intron_boundary i_start="29938" i_stop="30015" i_length="78"/>
          </intron>
          <exon e_serial="2" e_score="0.997">
            <gDNA_exon_boundary e_start="30016" e_stop="30727" e_length="712"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29560" stop="29937"/>
              <exon start="30016" stop="30727"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U571488" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAACTTGAAGCCGACTCTTTCTCTCTCAAGTCTCAACCTCATTGTTTATATATAGGCACATTTCATTCTCTTTTCCTTGCTTATTACTATCCAAATTTTTATTTCTTGCTGCAAAAGTATATCGCTATTTGTTCATGTTCCGGTAACCAATTAATATATATACAAAAATATCAGTATAACAACAAAACGGAAAAATGAGTTGTAATGGTTGTCGAGTCCTTCGAAAAGGATGCAGTGATAACTGTATATTGAGACCTTGTTTGCAATGGATCGAAACACCGGAAGCACAAGGACACGCTACTGTATTTGTAGCTAAGTTTTTTGGCCGTGCTGGACTTATGTCCTTCATTTCCGCCGTTCCAGAAAACCAACGGCCTG : CTTTGTTTCAGTCCTTGTTATACGAAGCTGCTGGGAGAACAGTGAACCCAGTCAACGGTGCTGTAGGTTTATTATGGACAGGTAATTGGCACGTCTGTCAAGCGGCGGTGGAAACCGTCCTCCGCGGCGGCGCGTTACGGCCGATCTCTGAATTTCTCGGCGCGTCGGTAGAGATTGATGAGGTGTCTGATTGCACCGATGTATTTAAGCTTCAGGATCCAAGTCTAAACATGCGACCGAAGATGCAGAAACGACGTCGTTCTCCTGAGGAAACTTCAATGTTGGATCTCAGTTTAACACCAGGTTTTAATCAGAAAGTGTATAATAGTCACCCTTTGCCGGAGAATCATCGGCGACCTGGAACTCCGTCTATGAATTCAGAAGAATCTGGAACAACTACTTGTTTTGAGAGTAGTGCTGTCATTGGAGATCATCAAGGAAAAGAACCCAAATTACTCAGCTTGTTCAATTAGTTTGTATTAATATTTTCCATTTTCTTTTTTTTTTTTACTATGAGGAAGGTTTTTTCCTGGAAGTAAAATTCCGGCGAATTTTTGTAAATTATTGGCACTGGATTTCCCTCGTGTAGAAAGGAGGGGAAAGTGAAAGTTTTGCCGGTGATTCCTTCCTTGTTTTGTTATTTTCTCCTTTTTGTTTTCATAACGAGTCTTATGAATGTTGAACATTGAATAAACTGATTGTTAATCGATTT</gDNA_template>
            <first_frame> K  L  E  A  D  S  F  S  L  K  S  Q  P  H  C  L  Y  I  G  T  F  H  S  L  F  L  A  Y  Y  Y  P  N  F  Y  F  L  L  Q  K  Y  I  A  I  C  S  C  S  G  N  Q  L  I  Y  I  Q  K  Y  Q  Y  N  N  K  T  E  K  *  V  V  M  V  V  E  S  F  E  K  D  A  V  I  T  V  Y  *  D  L  V  C  N  G  S  K  H  R  K  H  K  D  T  L  L  Y  L  *  L  S  F  L  A  V  L  D  L  C  P  S  F  P  P  F  Q  K  T  N  G  L  :  L  C  F  S  P  C  Y  T  K  L  L  G  E  Q  *  T  Q  S  T  V  L  *  V  Y  Y  G  Q  V  I  G  T  S  V  K  R  R  W  K  P  S  S  A  A  A  R  Y  G  R  S  L  N  F  S  A  R  R  *  R  L  M  R  C  L  I  A  P  M  Y  L  S  F  R  I  Q  V  *  T  C  D  R  R  C  R  N  D  V  V  L  L  R  K  L  Q  C  W  I  S  V  *  H  Q  V  L  I  R  K  C  I  I  V  T  L  C  R  R  I  I  G  D  L  E  L  R  L  *  I  Q  K  N  L  E  Q  L  L  V  L  R  V  V  L  S  L  E  I  I  K  E  K  N  P  N  Y  S  A  C  S  I  S  L  Y  *  Y  F  P  F  S  F  F  F  L  L  *  G  R  F  F  P  G  S  K  I  P  A  N  F  C  K  L  L  A  L  D  F  P  R  V  E  R  R  G  K  *  K  F  C  R  *  F  L  P  C  F  V  I  F  S  F  L  F  S  *  R  V  L  *  M  L  N  I  E  *  T  D  C  *  S  I  </first_frame>
            <second_frame>  N  L  K  P  T  L  S  L  S  S  L  N  L  I  V  Y  I  *  A  H  F  I  L  F  S  L  L  I  T  I  Q  I  F  I  S  C  C  K  S  I  S  L  F  V  H  V  P  V  T  N  *  Y  I  Y  K  N  I  S  I  T  T  K  R  K  N  E  L  *  W  L  S  S  P  S  K  R  M  Q  *  *  L  Y  I  E  T  L  F  A  M  D  R  N  T  G  S  T  R  T  R  Y  C  I  C  S  *  V  F  W  P  C  W  T  Y  V  L  H  F  R  R  S  R  K  P  T  A  C :   F  V  S  V  L  V  I  R  S  C  W  E  N  S  E  P  S  Q  R  C  C  R  F  I  M  D  R  *  L  A  R  L  S  S  G  G  G  N  R  P  P  R  R  R  V  T  A  D  L  *  I  S  R  R  V  G  R  D  *  *  G  V  *  L  H  R  C  I  *  A  S  G  S  K  S  K  H  A  T  E  D  A  E  T  T  S  F  S  *  G  N  F  N  V  G  S  Q  F  N  T  R  F  *  S  E  S  V  *  *  S  P  F  A  G  E  S  S  A  T  W  N  S  V  Y  E  F  R  R  I  W  N  N  Y  L  F  *  E  *  C  C  H  W  R  S  S  R  K  R  T  Q  I  T  Q  L  V  Q  L  V  C  I  N  I  F  H  F  L  F  F  F  Y  Y  E  E  G  F  F  L  E  V  K  F  R  R  I  F  V  N  Y  W  H  W  I  S  L  V  *  K  G  G  E  S  E  S  F  A  G  D  S  F  L  V  L  L  F  S  P  F  C  F  H  N  E  S  Y  E  C  *  T  L  N  K  L  I  V  N  R  F </second_frame>
            <third_frame>   T  *  S  R  L  F  L  S  Q  V  S  T  S  L  F  I  Y  R  H  I  S  F  S  F  P  C  L  L  L  S  K  F  L  F  L  A  A  K  V  Y  R  Y  L  F  M  F  R  *  P  I  N  I  Y  T  K  I  S  V  *  Q  Q  N  G  K  M  S  C  N  G  C  R  V  L  R  K  G  C  S  D  N  C  I  L  R  P  C  L  Q  W  I  E  T  P  E  A  Q  G  H  A  T  V  F  V  A  K  F  F  G  R  A  G  L  M  S  F  I  S  A  V  P  E  N  Q  R  P   : A  L  F  Q  S  L  L  Y  E  A  A  G  R  T  V  N  P  V  N  G  A  V  G  L  L  W  T  G  N  W  H  V  C  Q  A  A  V  E  T  V  L  R  G  G  A  L  R  P  I  S  E  F  L  G  A  S  V  E  I  D  E  V  S  D  C  T  D  V  F  K  L  Q  D  P  S  L  N  M  R  P  K  M  Q  K  R  R  R  S  P  E  E  T  S  M  L  D  L  S  L  T  P  G  F  N  Q  K  V  Y  N  S  H  P  L  P  E  N  H  R  R  P  G  T  P  S  M  N  S  E  E  S  G  T  T  T  C  F  E  S  S  A  V  I  G  D  H  Q  G  K  E  P  K  L  L  S  L  F  N  *  F  V  L  I  F  S  I  F  F  F  F  F  T  M  R  K  V  F  S  W  K  *  N  S  G  E  F  L  *  I  I  G  T  G  F  P  S  C  R  K  E  G  K  V  K  V  L  P  V  I  P  S  L  F  C  Y  F  L  L  F  V  F  I  T  S  L  M  N  V  E  H  *  I  N  *  L  L  I  D   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0053H21.1" strand="+"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="29739" stop="29937"/>
                    <exon start="30016" stop="30488"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>669</number_coding_nucleotides>
                  <number_encoded_amino_acids>223</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QQNGKMSCNGCRVLRKGCSDNCILRPCLQWIETPEAQGHATVFVAKFFGRAGLMSFISAVPENQRPALFQSLLYEAAGRTVNPVNGAVGLLWTGNWHVCQAAVETVLRGGALRPISEFLGASVEIDEVSDCTDVFKLQDPSLNMRPKMQKRRRSPEETSMLDLSLTPGFNQKVYNSHPLPENHRRPGTPSMNSEESGTTTCFESSAVIGDHQGKEPKLLSLFN*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0053H21.1" strand="+"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="29560" stop="29757"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>195</number_coding_nucleotides>
                  <number_encoded_amino_acids>65</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KLEADSFSLKSQPHCLYIGTFHSLFLAYYYPNFYFLLQKYIAICSCSGNQLIYIQKYQYNNKTEK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="-" PGL_start="40944" PGL_stop="37436"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="40944" e_stop="40830"/>
            <exon e_start="40739" e_stop="40670"/>
            <exon e_start="40364" e_stop="39759"/>
            <exon e_start="39676" e_stop="39146"/>
            <exon e_start="38139" e_stop="37436"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.840" e_score="1.000"/>
          <exon-intron don_prob="0.976" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.995" e_score="0.983"/>
          <exon-only e_score="0.993"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="40944" e_stop="40830" e_length="115"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.998">
            <gDNA_intron_boundary i_start="40829" i_stop="40740" i_length="90"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="40739" e_stop="40670" e_length="70"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.840">
            <gDNA_intron_boundary i_start="40669" i_stop="40365" i_length="305"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="40364" e_stop="39759" e_length="606"/>
          </exon>
          <intron i_serial="3" don_prob="0.976" acc_prob="1.000">
            <gDNA_intron_boundary i_start="39758" i_stop="39677" i_length="82"/>
          </intron>
          <exon e_serial="4" e_score="0.983">
            <gDNA_exon_boundary e_start="39676" e_stop="39146" e_length="531"/>
          </exon>
          <intron i_serial="4" don_prob="1.000" acc_prob="0.995">
            <gDNA_intron_boundary i_start="39145" i_stop="38140" i_length="1006"/>
          </intron>
          <exon e_serial="5" e_score="0.993">
            <gDNA_exon_boundary e_start="38139" e_stop="37436" e_length="704"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="40944" stop="40830"/>
              <exon start="40739" stop="40670"/>
              <exon start="40364" stop="39759"/>
              <exon start="39676" stop="39146"/>
              <exon start="38139" stop="37436"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U574291" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GGATTCCTCCAATACAAAATACATTTTTTCAGAGACCTACTGCTACTGTTAACAATAATATGACCACTAAAAAGGATGAGCTTCTATTCTCTGCTATGAAGAGGACCTCTGACTG : GATTTTCTCCCAAGAGATTCCCAGTGATGTAACTGTAAATGCAGGAGGAACCTCCTTTACACTGCACAAG : TTCCCATTAGTTTCAAAGAGTGGATACATAAGAAAGTTGATCTCAGAATCTAATGAGGCTGATGTTTCTACTATCGATATCCCTGATATACCTGGTGGAGGAGAGGCATTTGAACTTGCAGCAAAGTTTTGTTATGGAATAAATTTTGAGATTAGCACAGAAAACATTGCCTTGCTGAGATGCGTGGCGGAATATCTTGAGATGACAGAAGACTATGCAGTTGCAAATTTGGTGGAAAGAACTGAGGCCTACTTTAATGAAGTAGCAATTACGAGTCTTGCGGGTGCAGTTACAATTTTGCGTTCATCAGAAAACCTTCTTCCCATTGCAGAGAAAGTAAAATTGGTGAGCCGATGCATAGACACAATTGCATATACAGCCTGCAAGGATAACCAATTCTCCACATCAGGTAGAGCAGAAGCTGGTATCAACGGATCCACGTTTTCAAACCCGAAGCCTATAGTTGACTGGTGGTCTGAAGATATAACCGTCCTTAGAATTGATTTTTTCCAAAGGGTTCTGATTGCGATGATGGCAAGGGGATTCAAGCGGTATGCACTTGGACCAATATTAATGCTCTACGCACAGAAGTCTCTTCGAGGTTTG : GAAATATTTGGAAAGGGAAGGAAAAAGATTGAACCAAAGCAAGAACATGAAAAAAGAGTTGTTTTAGAAACCATCGTTAGTCTTCTGCCAAAGGAGAAAAATGCATTGTCCGTTAGCTTTCTGTCAATGCTGCTCCGAGCTGCAATATATCTGGAGACCACGATAGCTTGCAGGCTTGACCTGGAGAAGAGGATGGCATTGCAGCTTGGACAGGCTGTATTGGATGATCTGTTAATTCCTTCAAGTTCCTTCACAGGAGACACCTTGTATGATGTTGAAACCGTGCAGCGTATTATGATGAATTTCCTTGACAATGAGGAGGGAAATCGATTAGGAGATGAAGAGTATCATGTGTCTCCTTCATTAAGTGACATGGAGCGGGTTGGAAAACTTATGGAAAATTACCTTGCTGAAATAGCCTCTGACCGTAATCTGTCTGTCACAAACTTCATTAATCTTGCTGAAGTCATCCCAGAGCAAGCAAGGATCACTGAAGATGGGATGTACAGGGCCATTGACATTTATTTGAAG : GCACATCCAGCTCTAAGCGACATAGAAAGAAAAAAGGTTTGTGGTATTATGGACTGTCAAAAACTATCTCGAGAAGCTTGTGCTCATGCTGCTCAAAATGATAGGCTCCCTGTTCAGACAGTTGTGCAAGTACTTTACTACGAGCAGCAACGTCTTCACAATGGGAGCCAGCTTGTAGCAACTGAACCTCCTGCTCTTGTTTCTTCCAAAAGGGATGATCAGTTCTCTACTAACCCTGTTTCAGACGAGGTCTCGAGTCTAAAACGAGAAAATCAGGAGCTGAAATTTGAGCTGCTGAAAATGAAGACGAGGTTGATAGAAATTGAAAAACCAAAGTCAAATACATCAGCCTCAAGCAGCCCTTTGGTCATTACTCAGCCATCTGCTGGTAAACCTCCTTTGCCAAGAAAATCTAACTTCATGAGCTCAGTATCGAAAAAGCTCGGAAGATTTATTCGAGCGGATGGACTCACGCATGGCAAAGCCCGAAATAAACCAAGTAAAGATAGACGTCATTCCATATCGTGATTTCAGCTAGCTATATTTCCATTATTGTCAAAATATGGTACATATTGGAATTTTTCAATTTAATCATGCAAGTTTGTATGGTAAAGTATATATTTTTTCGTGCTTTATCCAGAAATATTATTTATGAAAGATTGTAATATTTGATTTCTCTTATATACCATGAAAAAATATTTGCA</gDNA_template>
            <first_frame> G  F  L  Q  Y  K  I  H  F  F  R  D  L  L  L  L  L  T  I  I  *  P  L  K  R  M  S  F  Y  S  L  L  *  R  G  P  L  T   : G  F  S  P  K  R  F  P  V  M  *  L  *  M  Q  E  E  P  P  L  H  C  T  S :   S  H  *  F  Q  R  V  D  T  *  E  S  *  S  Q  N  L  M  R  L  M  F  L  L  S  I  S  L  I  Y  L  V  E  E  R  H  L  N  L  Q  Q  S  F  V  M  E  *  I  L  R  L  A  Q  K  T  L  P  C  *  D  A  W  R  N  I  L  R  *  Q  K  T  M  Q  L  Q  I  W  W  K  E  L  R  P  T  L  M  K  *  Q  L  R  V  L  R  V  Q  L  Q  F  C  V  H  Q  K  T  F  F  P  L  Q  R  K  *  N  W  *  A  D  A  *  T  Q  L  H  I  Q  P  A  R  I  T  N  S  P  H  Q  V  E  Q  K  L  V  S  T  D  P  R  F  Q  T  R  S  L  *  L  T  G  G  L  K  I  *  P  S  L  E  L  I  F  S  K  G  F  *  L  R  *  W  Q  G  D  S  S  G  M  H  L  D  Q  Y  *  C  S  T  H  R  S  L  F  E  V  W :   K  Y  L  E  R  E  G  K  R  L  N  Q  S  K  N  M  K  K  E  L  F  *  K  P  S  L  V  F  C  Q  R  R  K  M  H  C  P  L  A  F  C  Q  C  C  S  E  L  Q  Y  I  W  R  P  R  *  L  A  G  L  T  W  R  R  G  W  H  C  S  L  D  R  L  Y  W  M  I  C  *  F  L  Q  V  P  S  Q  E  T  P  C  M  M  L  K  P  C  S  V  L  *  *  I  S  L  T  M  R  R  E  I  D  *  E  M  K  S  I  M  C  L  L  H  *  V  T  W  S  G  L  E  N  L  W  K  I  T  L  L  K  *  P  L  T  V  I  C  L  S  Q  T  S  L  I  L  L  K  S  S  Q  S  K  Q  G  S  L  K  M  G  C  T  G  P  L  T  F  I  *  R :   H  I  Q  L  *  A  T  *  K  E  K  R  F  V  V  L  W  T  V  K  N  Y  L  E  K  L  V  L  M  L  L  K  M  I  G  S  L  F  R  Q  L  C  K  Y  F  T  T  S  S  N  V  F  T  M  G  A  S  L  *  Q  L  N  L  L  L  L  F  L  P  K  G  M  I  S  S  L  L  T  L  F  Q  T  R  S  R  V  *  N  E  K  I  R  S  *  N  L  S  C  *  K  *  R  R  G  *  *  K  L  K  N  Q  S  Q  I  H  Q  P  Q  A  A  L  W  S  L  L  S  H  L  L  V  N  L  L  C  Q  E  N  L  T  S  *  A  Q  Y  R  K  S  S  E  D  L  F  E  R  M  D  S  R  M  A  K  P  E  I  N  Q  V  K  I  D  V  I  P  Y  R  D  F  S  *  L  Y  F  H  Y  C  Q  N  M  V  H  I  G  I  F  Q  F  N  H  A  S  L  Y  G  K  V  Y  I  F  S  C  F  I  Q  K  Y  Y  L  *  K  I  V  I  F  D  F  S  Y  I  P  *  K  N  I  C  </first_frame>
            <second_frame>  D  S  S  N  T  K  Y  I  F  S  E  T  Y  C  Y  C  *  Q  *  Y  D  H  *  K  G  *  A  S  I  L  C  Y  E  E  D  L  *  L  :  D  F  L  P  R  D  S  Q  *  C  N  C  K  C  R  R  N  L  L  Y  T  A  Q   : V  P  I  S  F  K  E  W  I  H  K  K  V  D  L  R  I  *  *  G  *  C  F  Y  Y  R  Y  P  *  Y  T  W  W  R  R  G  I  *  T  C  S  K  V  L  L  W  N  K  F  *  D  *  H  R  K  H  C  L  A  E  M  R  G  G  I  S  *  D  D  R  R  L  C  S  C  K  F  G  G  K  N  *  G  L  L  *  *  S  S  N  Y  E  S  C  G  C  S  Y  N  F  A  F  I  R  K  P  S  S  H  C  R  E  S  K  I  G  E  P  M  H  R  H  N  C  I  Y  S  L  Q  G  *  P  I  L  H  I  R  *  S  R  S  W  Y  Q  R  I  H  V  F  K  P  E  A  Y  S  *  L  V  V  *  R  Y  N  R  P  *  N  *  F  F  P  K  G  S  D  C  D  D  G  K  G  I  Q  A  V  C  T  W  T  N  I  N  A  L  R  T  E  V  S  S  R  F   : G  N  I  W  K  G  K  E  K  D  *  T  K  A  R  T  *  K  K  S  C  F  R  N  H  R  *  S  S  A  K  G  E  K  C  I  V  R  *  L  S  V  N  A  A  P  S  C  N  I  S  G  D  H  D  S  L  Q  A  *  P  G  E  E  D  G  I  A  A  W  T  G  C  I  G  *  S  V  N  S  F  K  F  L  H  R  R  H  L  V  *  C  *  N  R  A  A  Y  Y  D  E  F  P  *  Q  *  G  G  K  S  I  R  R  *  R  V  S  C  V  S  F  I  K  *  H  G  A  G  W  K  T  Y  G  K  L  P  C  *  N  S  L  *  P  *  S  V  C  H  K  L  H  *  S  C  *  S  H  P  R  A  S  K  D  H  *  R  W  D  V  Q  G  H  *  H  L  F  E   : G  T  S  S  S  K  R  H  R  K  K  K  G  L  W  Y  Y  G  L  S  K  T  I  S  R  S  L  C  S  C  C  S  K  *  *  A  P  C  S  D  S  C  A  S  T  L  L  R  A  A  T  S  S  Q  W  E  P  A  C  S  N  *  T  S  C  S  C  F  F  Q  K  G  *  S  V  L  Y  *  P  C  F  R  R  G  L  E  S  K  T  R  K  S  G  A  E  I  *  A  A  E  N  E  D  E  V  D  R  N  *  K  T  K  V  K  Y  I  S  L  K  Q  P  F  G  H  Y  S  A  I  C  W  *  T  S  F  A  K  K  I  *  L  H  E  L  S  I  E  K  A  R  K  I  Y  S  S  G  W  T  H  A  W  Q  S  P  K  *  T  K  *  R  *  T  S  F  H  I  V  I  S  A  S  Y  I  S  I  I  V  K  I  W  Y  I  L  E  F  F  N  L  I  M  Q  V  C  M  V  K  Y  I  F  F  R  A  L  S  R  N  I  I  Y  E  R  L  *  Y  L  I  S  L  I  Y  H  E  K  I  F  A </second_frame>
            <third_frame>   I  P  P  I  Q  N  T  F  F  Q  R  P  T  A  T  V  N  N  N  M  T  T  K  K  D  E  L  L  F  S  A  M  K  R  T  S  D  W :   I  F  S  Q  E  I  P  S  D  V  T  V  N  A  G  G  T  S  F  T  L  H  K  :  F  P  L  V  S  K  S  G  Y  I  R  K  L  I  S  E  S  N  E  A  D  V  S  T  I  D  I  P  D  I  P  G  G  G  E  A  F  E  L  A  A  K  F  C  Y  G  I  N  F  E  I  S  T  E  N  I  A  L  L  R  C  V  A  E  Y  L  E  M  T  E  D  Y  A  V  A  N  L  V  E  R  T  E  A  Y  F  N  E  V  A  I  T  S  L  A  G  A  V  T  I  L  R  S  S  E  N  L  L  P  I  A  E  K  V  K  L  V  S  R  C  I  D  T  I  A  Y  T  A  C  K  D  N  Q  F  S  T  S  G  R  A  E  A  G  I  N  G  S  T  F  S  N  P  K  P  I  V  D  W  W  S  E  D  I  T  V  L  R  I  D  F  F  Q  R  V  L  I  A  M  M  A  R  G  F  K  R  Y  A  L  G  P  I  L  M  L  Y  A  Q  K  S  L  R  G  L  :  E  I  F  G  K  G  R  K  K  I  E  P  K  Q  E  H  E  K  R  V  V  L  E  T  I  V  S  L  L  P  K  E  K  N  A  L  S  V  S  F  L  S  M  L  L  R  A  A  I  Y  L  E  T  T  I  A  C  R  L  D  L  E  K  R  M  A  L  Q  L  G  Q  A  V  L  D  D  L  L  I  P  S  S  S  F  T  G  D  T  L  Y  D  V  E  T  V  Q  R  I  M  M  N  F  L  D  N  E  E  G  N  R  L  G  D  E  E  Y  H  V  S  P  S  L  S  D  M  E  R  V  G  K  L  M  E  N  Y  L  A  E  I  A  S  D  R  N  L  S  V  T  N  F  I  N  L  A  E  V  I  P  E  Q  A  R  I  T  E  D  G  M  Y  R  A  I  D  I  Y  L  K  :  A  H  P  A  L  S  D  I  E  R  K  K  V  C  G  I  M  D  C  Q  K  L  S  R  E  A  C  A  H  A  A  Q  N  D  R  L  P  V  Q  T  V  V  Q  V  L  Y  Y  E  Q  Q  R  L  H  N  G  S  Q  L  V  A  T  E  P  P  A  L  V  S  S  K  R  D  D  Q  F  S  T  N  P  V  S  D  E  V  S  S  L  K  R  E  N  Q  E  L  K  F  E  L  L  K  M  K  T  R  L  I  E  I  E  K  P  K  S  N  T  S  A  S  S  S  P  L  V  I  T  Q  P  S  A  G  K  P  P  L  P  R  K  S  N  F  M  S  S  V  S  K  K  L  G  R  F  I  R  A  D  G  L  T  H  G  K  A  R  N  K  P  S  K  D  R  R  H  S  I  S  *  F  Q  L  A  I  F  P  L  L  S  K  Y  G  T  Y  W  N  F  S  I  *  S  C  K  F  V  W  *  S  I  Y  F  F  V  L  Y  P  E  I  L  F  M  K  D  C  N  I  *  F  L  L  Y  T  M  K  K  Y  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0053H21.1" strand="-"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="40942" stop="40830"/>
                    <exon start="40739" stop="40670"/>
                    <exon start="40364" stop="39759"/>
                    <exon start="39676" stop="39146"/>
                    <exon start="38139" stop="37612"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1845</number_coding_nucleotides>
                  <number_encoded_amino_acids>615</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IPPIQNTFFQRPTATVNNNMTTKKDELLFSAMKRTSDWIFSQEIPSDVTVNAGGTSFTLHKFPLVSKSGYIRKLISESNEADVSTIDIPDIPGGGEAFELAAKFCYGINFEISTENIALLRCVAEYLEMTEDYAVANLVERTEAYFNEVAITSLAGAVTILRSSENLLPIAEKVKLVSRCIDTIAYTACKDNQFSTSGRAEAGINGSTFSNPKPIVDWWSEDITVLRIDFFQRVLIAMMARGFKRYALGPILMLYAQKSLRGLEIFGKGRKKIEPKQEHEKRVVLETIVSLLPKEKNALSVSFLSMLLRAAIYLETTIACRLDLEKRMALQLGQAVLDDLLIPSSSFTGDTLYDVETVQRIMMNFLDNEEGNRLGDEEYHVSPSLSDMERVGKLMENYLAEIASDRNLSVTNFINLAEVIPEQARITEDGMYRAIDIYLKAHPALSDIERKKVCGIMDCQKLSREACAHAAQNDRLPVQTVVQVLYYEQQRLHNGSQLVATEPPALVSSKRDDQFSTNPVSDEVSSLKRENQELKFELLKMKTRLIEIEKPKSNTSASSSPLVITQPSAGKPPLPRKSNFMSSVSKKLGRFIRADGLTHGKARNKPSKDRRHSIS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="40920" e_stop="40245"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="40920" e_stop="40245" e_length="676"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="40920" stop="40245"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U587305" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTTTTCAGAGACCTACTGCTACTGTTAACAATAATATGACCACTAAAAAGGATGAGCTTCTATTCTCTGCTATGAAGAGGACCTCTGACTGGTATGTTCTTTTCTCATTTTTTTAAATCTTCTGCTTTCTAGAAGTAATCTATCTCTTTATTATATTCTTCTATTATAATAATCTTAACAGGATTTTCTCCCAAGAGATTCCCAGTGATGTAACTGTAAATGCAGGAGGAACCTCCTTTACACTGCACAAGGTGAGTTGTTCTATCTGTGCCTTTGTCATAACTAATCCCTGCACACAATCAAAAAAATTGTTGTTGGTTTAATTACTAAAATTCCTAATTGGATTGAAATTATCGACCTTAGTCACATCTCAGTGTAATTATAACAACAAATTCAGTGTAATCGGGGTCGGGGGAGGGGTTATGTAGACTTACCCTAACTTTTAGGGATAGAGAGGTCCTCGCCAATATGAACGAGCTCACACAGGTCGAGTTAAGGCCTTAGTCATGATGATTGATAAGTAGGATCAATAATGTATCAGTTGTGATCCTTGCAGTTCCCATTAGTTTCAAAGAGTGGATACATAAGAAAGTTGATCTCAGAATCTAATGAGGCTGATGTTTCTACTATCGATATCCCTGATATACCTGGTGGAGGAGAGGCATTTGAACTTGCA</gDNA_template>
            <first_frame> F  F  R  D  L  L  L  L  L  T  I  I  *  P  L  K  R  M  S  F  Y  S  L  L  *  R  G  P  L  T  G  M  F  F  S  H  F  F  K  S  S  A  F  *  K  *  S  I  S  L  L  Y  S  S  I  I  I  I  L  T  G  F  S  P  K  R  F  P  V  M  *  L  *  M  Q  E  E  P  P  L  H  C  T  R  *  V  V  L  S  V  P  L  S  *  L  I  P  A  H  N  Q  K  N  C  C  W  F  N  Y  *  N  S  *  L  D  *  N  Y  R  P  *  S  H  L  S  V  I  I  T  T  N  S  V  *  S  G  S  G  E  G  L  C  R  L  T  L  T  F  R  D  R  E  V  L  A  N  M  N  E  L  T  Q  V  E  L  R  P  *  S  *  *  L  I  S  R  I  N  N  V  S  V  V  I  L  A  V  P  I  S  F  K  E  W  I  H  K  K  V  D  L  R  I  *  *  G  *  C  F  Y  Y  R  Y  P  *  Y  T  W  W  R  R  G  I  *  T  C  </first_frame>
            <second_frame>  F  S  E  T  Y  C  Y  C  *  Q  *  Y  D  H  *  K  G  *  A  S  I  L  C  Y  E  E  D  L  *  L  V  C  S  F  L  I  F  L  N  L  L  L  S  R  S  N  L  S  L  Y  Y  I  L  L  L  *  *  S  *  Q  D  F  L  P  R  D  S  Q  *  C  N  C  K  C  R  R  N  L  L  Y  T  A  Q  G  E  L  F  Y  L  C  L  C  H  N  *  S  L  H  T  I  K  K  I  V  V  G  L  I  T  K  I  P  N  W  I  E  I  I  D  L  S  H  I  S  V  *  L  *  Q  Q  I  Q  C  N  R  G  R  G  R  G  Y  V  D  L  P  *  L  L  G  I  E  R  S  S  P  I  *  T  S  S  H  R  S  S  *  G  L  S  H  D  D  *  *  V  G  S  I  M  Y  Q  L  *  S  L  Q  F  P  L  V  S  K  S  G  Y  I  R  K  L  I  S  E  S  N  E  A  D  V  S  T  I  D  I  P  D  I  P  G  G  G  E  A  F  E  L  A </second_frame>
            <third_frame>   F  Q  R  P  T  A  T  V  N  N  N  M  T  T  K  K  D  E  L  L  F  S  A  M  K  R  T  S  D  W  Y  V  L  F  S  F  F  *  I  F  C  F  L  E  V  I  Y  L  F  I  I  F  F  Y  Y  N  N  L  N  R  I  F  S  Q  E  I  P  S  D  V  T  V  N  A  G  G  T  S  F  T  L  H  K  V  S  C  S  I  C  A  F  V  I  T  N  P  C  T  Q  S  K  K  L  L  L  V  *  L  L  K  F  L  I  G  L  K  L  S  T  L  V  T  S  Q  C  N  Y  N  N  K  F  S  V  I  G  V  G  G  G  V  M  *  T  Y  P  N  F  *  G  *  R  G  P  R  Q  Y  E  R  A  H  T  G  R  V  K  A  L  V  M  M  I  D  K  *  D  Q  *  C  I  S  C  D  P  C  S  S  H  *  F  Q  R  V  D  T  *  E  S  *  S  Q  N  L  M  R  L  M  F  L  L  S  I  S  L  I  Y  L  V  E  E  R  H  L  N  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0053H21.1" strand="-"/>
                <serials PGL_serial="9" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="40804" stop="40598"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>204</number_coding_nucleotides>
                  <number_encoded_amino_acids>68</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IFCFLEVIYLFIIFFYYNNLNRIFSQEIPSDVTVNAGGTSFTLHKVSCSICAFVITNPCTQSKKLLLV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="+" PGL_start="47381" PGL_stop="48069"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="47381" e_stop="48069"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.999"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.999">
            <gDNA_exon_boundary e_start="47381" e_stop="48069" e_length="689"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47381" stop="48069"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U600722" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGTCTTTTTCTCTTCTCTTCTCCTCTCTACTTATTTCTCTAAAAACAAAAACAAAAAAAAAAAAGTTTCATTCACAAGTTCAATTGGAAAAACTTTTCTCTAATTCCTTCCTCTCATGATGCAATTTACTGAGAGTTTACCTCCACAAGTTTCATCATTTTCAAGTTTGATGATGAACAAGGATAGTAGTACTAATAATAATCAGATCCAACGCGCCCGCCCGTGGCCTGGTTTTCACACATCGAAGAATTTGGGGAACATTGGGGATACTAATTGCATGGAACAGTTGTTAGTCCATTGCGCCAATGCCATCGAGAGCAATGACGCAACTTTAGCACAACAAATATTATGGGTCCTTAATAACATTGCCCCTCCTGATGGTGACTCGAACCAACGCCTAACTTGTGGATTCCTACGAGCCCTAATTCTTCGTGCTGCGAAAATTGGGACTTGTAAATTACTCACTGCTAATCTGAATCATTCCATGGAAACTCATAAATTCTCCATTATTGAGCTTGCAAGTTTCGTTGATTTAACCCCCTTGGCATCGGTTCGGGTTCACGGCTGCTAACGCTTCTATATTAGAAGCTGTGGAAGGTTACTCTATTATTCACATTGTTGATTTCAGCTTAACTCATTGCATGCAAATTCCAACACTTATAGATGCAGTTTCTACTCGAGTAGAAGGA</gDNA_template>
            <first_frame> S  L  F  L  F  S  S  P  L  Y  L  F  L  *  K  Q  K  Q  K  K  K  S  F  I  H  K  F  N  W  K  N  F  S  L  I  P  S  S  H  D  A  I  Y  *  E  F  T  S  T  S  F  I  I  F  K  F  D  D  E  Q  G  *  *  Y  *  *  *  S  D  P  T  R  P  P  V  A  W  F  S  H  I  E  E  F  G  E  H  W  G  Y  *  L  H  G  T  V  V  S  P  L  R  Q  C  H  R  E  Q  *  R  N  F  S  T  T  N  I  M  G  P  *  *  H  C  P  S  *  W  *  L  E  P  T  P  N  L  W  I  P  T  S  P  N  S  S  C  C  E  N  W  D  L  *  I  T  H  C  *  S  E  S  F  H  G  N  S  *  I  L  H  Y  *  A  C  K  F  R  *  F  N  P  L  G  I  G  S  G  S  R  L  L  T  L  L  Y  *  K  L  W  K  V  T  L  L  F  T  L  L  I  S  A  *  L  I  A  C  K  F  Q  H  L  *  M  Q  F  L  L  E  *  K   </first_frame>
            <second_frame>  V  F  F  S  S  L  L  L  S  T  Y  F  S  K  N  K  N  K  K  K  K  V  S  F  T  S  S  I  G  K  T  F  L  *  F  L  P  L  M  M  Q  F  T  E  S  L  P  P  Q  V  S  S  F  S  S  L  M  M  N  K  D  S  S  T  N  N  N  Q  I  Q  R  A  R  P  W  P  G  F  H  T  S  K  N  L  G  N  I  G  D  T  N  C  M  E  Q  L  L  V  H  C  A  N  A  I  E  S  N  D  A  T  L  A  Q  Q  I  L  W  V  L  N  N  I  A  P  P  D  G  D  S  N  Q  R  L  T  C  G  F  L  R  A  L  I  L  R  A  A  K  I  G  T  C  K  L  L  T  A  N  L  N  H  S  M  E  T  H  K  F  S  I  I  E  L  A  S  F  V  D  L  T  P  L  A  S  V  R  V  H  G  C  *  R  F  Y  I  R  S  C  G  R  L  L  Y  Y  S  H  C  *  F  Q  L  N  S  L  H  A  N  S  N  T  Y  R  C  S  F  Y  S  S  R  R  </second_frame>
            <third_frame>   S  F  S  L  L  F  S  S  L  L  I  S  L  K  T  K  T  K  K  K  K  F  H  S  Q  V  Q  L  E  K  L  F  S  N  S  F  L  S  *  C  N  L  L  R  V  Y  L  H  K  F  H  H  F  Q  V  *  *  *  T  R  I  V  V  L  I  I  I  R  S  N  A  P  A  R  G  L  V  F  T  H  R  R  I  W  G  T  L  G  I  L  I  A  W  N  S  C  *  S  I  A  P  M  P  S  R  A  M  T  Q  L  *  H  N  K  Y  Y  G  S  L  I  T  L  P  L  L  M  V  T  R  T  N  A  *  L  V  D  S  Y  E  P  *  F  F  V  L  R  K  L  G  L  V  N  Y  S  L  L  I  *  I  I  P  W  K  L  I  N  S  P  L  L  S  L  Q  V  S  L  I  *  P  P  W  H  R  F  G  F  T  A  A  N  A  S  I  L  E  A  V  E  G  Y  S  I  I  H  I  V  D  F  S  L  T  H  C  M  Q  I  P  T  L  I  D  A  V  S  T  R  V  E  G </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0053H21.1" strand="+"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="47484" stop="47951"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>465</number_coding_nucleotides>
                  <number_encoded_amino_acids>155</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FLPLMMQFTESLPPQVSSFSSLMMNKDSSTNNNQIQRARPWPGFHTSKNLGNIGDTNCMEQLLVHCANAIESNDATLAQQILWVLNNIAPPDGDSNQRLTCGFLRALILRAAKIGTCKLLTANLNHSMETHKFSIIELASFVDLTPLASVRVHGC*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="+" PGL_start="48243" PGL_stop="48804"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="48243" e_stop="48804"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.993"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.993">
            <gDNA_exon_boundary e_start="48243" e_stop="48804" e_length="562"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="48243" stop="48804"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U597652" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CGAACAGCTACGTGTTCAAAATCTAATACGTCCGGATAATGGCGAAGCACTAGTAATAAACTGTCACATGATGCTTCATTACATACCGGAGGAAACAACGGTAATTTCCAACTCATTCCGTGCCATGTTTCTTAAGGCCATTCGGAATTTGGACCCAACAATTGTTGTGCTAGTAGATGAAGACGCGGATTTTACTTCTAATAATCTGGTGTGCAGATTAAGATCGGCGTTTAATTATTTATGGATACCTTATGATACAGTGGATACATTTCTTCCGCGAGGGAGCAAGCAAAGGCAGTGGTATGAAGCGGATATTTGCTGGAAGATTGAGAACGTGATAGCTCAGGAGGGAATACAACGACTAGAACGGCTGGAGCCGAAGAGTCAGTGGGTGCAACGGATGAGAAATGCAAATTTCAGAAGCAGTGGATTTAGCGAAGAGGGAGTTACGGAAGTGAAGAACATGTTGGATGAACATGCAGCTGGGTGGGGGCTAAAGAGGGATGAAGAATATCTTGTGCTTACATGGAAAGGACATAATGTTGTATTTGCTACTGCTTGG</gDNA_template>
            <first_frame> R  T  A  T  C  S  K  S  N  T  S  G  *  W  R  S  T  S  N  K  L  S  H  D  A  S  L  H  T  G  G  N  N  G  N  F  Q  L  I  P  C  H  V  S  *  G  H  S  E  F  G  P  N  N  C  C  A  S  R  *  R  R  G  F  Y  F  *  *  S  G  V  Q  I  K  I  G  V  *  L  F  M  D  T  L  *  Y  S  G  Y  I  S  S  A  R  E  Q  A  K  A  V  V  *  S  G  Y  L  L  E  D  *  E  R  D  S  S  G  G  N  T  T  T  R  T  A  G  A  E  E  S  V  G  A  T  D  E  K  C  K  F  Q  K  Q  W  I  *  R  R  G  S  Y  G  S  E  E  H  V  G  *  T  C  S  W  V  G  A  K  E  G  *  R  I  S  C  A  Y  M  E  R  T  *  C  C  I  C  Y  C  L  </first_frame>
            <second_frame>  E  Q  L  R  V  Q  N  L  I  R  P  D  N  G  E  A  L  V  I  N  C  H  M  M  L  H  Y  I  P  E  E  T  T  V  I  S  N  S  F  R  A  M  F  L  K  A  I  R  N  L  D  P  T  I  V  V  L  V  D  E  D  A  D  F  T  S  N  N  L  V  C  R  L  R  S  A  F  N  Y  L  W  I  P  Y  D  T  V  D  T  F  L  P  R  G  S  K  Q  R  Q  W  Y  E  A  D  I  C  W  K  I  E  N  V  I  A  Q  E  G  I  Q  R  L  E  R  L  E  P  K  S  Q  W  V  Q  R  M  R  N  A  N  F  R  S  S  G  F  S  E  E  G  V  T  E  V  K  N  M  L  D  E  H  A  A  G  W  G  L  K  R  D  E  E  Y  L  V  L  T  W  K  G  H  N  V  V  F  A  T  A  W </second_frame>
            <third_frame>   N  S  Y  V  F  K  I  *  Y  V  R  I  M  A  K  H  *  *  *  T  V  T  *  C  F  I  T  Y  R  R  K  Q  R  *  F  P  T  H  S  V  P  C  F  L  R  P  F  G  I  W  T  Q  Q  L  L  C  *  *  M  K  T  R  I  L  L  L  I  I  W  C  A  D  *  D  R  R  L  I  I  Y  G  Y  L  M  I  Q  W  I  H  F  F  R  E  G  A  S  K  G  S  G  M  K  R  I  F  A  G  R  L  R  T  *  *  L  R  R  E  Y  N  D  *  N  G  W  S  R  R  V  S  G  C  N  G  *  E  M  Q  I  S  E  A  V  D  L  A  K  R  E  L  R  K  *  R  T  C  W  M  N  M  Q  L  G  G  G  *  R  G  M  K  N  I  L  C  L  H  G  K  D  I  M  L  Y  L  L  L  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0053H21.1" strand="+"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="48244" stop="48804"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>561</number_coding_nucleotides>
                  <number_encoded_amino_acids>187</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EQLRVQNLIRPDNGEALVINCHMMLHYIPEETTVISNSFRAMFLKAIRNLDPTIVVLVDEDADFTSNNLVCRLRSAFNYLWIPYDTVDTFLPRGSKQRQWYEADICWKIENVIAQEGIQRLERLEPKSQWVQRMRNANFRSSGFSEEGVTEVKNMLDEHAAGWGLKRDEEYLVLTWKGHNVVFATAW</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="-" PGL_start="54321" PGL_stop="51914"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="54321" e_stop="54056"/>
            <exon e_start="53886" e_stop="53686"/>
            <exon e_start="53581" e_stop="53416"/>
            <exon e_start="52569" e_stop="51914"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.927" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="54321" e_stop="54056" e_length="266"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.995">
            <gDNA_intron_boundary i_start="54055" i_stop="53887" i_length="169"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="53886" e_stop="53686" e_length="201"/>
          </exon>
          <intron i_serial="2" don_prob="0.998" acc_prob="0.992">
            <gDNA_intron_boundary i_start="53685" i_stop="53582" i_length="104"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="53581" e_stop="53416" e_length="166"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="0.927">
            <gDNA_intron_boundary i_start="53415" i_stop="52570" i_length="846"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="52569" e_stop="51914" e_length="656"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54321" stop="54056"/>
              <exon start="53886" stop="53686"/>
              <exon start="53581" stop="53416"/>
              <exon start="52569" stop="51914"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U580841" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GCATAACCCATTGTACTTAATTTTATAGCCAGAGAAATTAAATGGGTCGTCTAAATCTTCTTATGTCAGTATTATTATCAATTTTATCAGTTAGTATTGTGTTGATGCCTAACTTGGCATCTGCACAATTAAAGACCAATTATTACGCCAATATTTGTCCTAATGTTGAATCCATTGTTAGAAATGTTGTTAACCAGAAATTCAAACAAACTTTTGTCACTGTCCCTGCTGTTCTCCGTCTCTTCTTCCATGATTGCTTTGTTGAG : GGATGTGATGCTTCAGTGATTGTATCATCAACACCAGGGAACACAGCTGAGAAGGATCATTCAGATAATCTATCATTGGCAGGAGATGGATTTGATACTGTAATTAAAGCCAAAGCCGCTGTTGATTCAAACTCACGTTGTAAAAATAAAGTCTCTTGTGCTGACATTCTCGCTTTAGCCACCAGAGATGTCATTCAGCTG : TCTGGGGGACCATGGTACCCAGTGGAATTAGGAAGGCTTGATGGGTTCACATCAAAAGCATCGAATGTGGAAGGGAAGCTACCAAAACCAACATTCAATCTCAATCAACTCAATTCTATGTTTGCCTCTCATGGTCTAACTCAGGCTGACATGATCGCCCTTTCTG : CGGCCCATTCTGTTGGTTTTTCTCATTGTGGCAAATTTTCCAACCGGATCTACAACTTCAGCCCTAAAAATCCAATAGACCCAACCCTTAACAAGCAATATGCAGCCCAATTACAAGGGATGTGTCCAAGGAATGTTGACCCAAGAATAGCCATTGACATGGATCCCAAAACTCCAAGGACATTTGACAATAATTACTACAAAAATTTACAACAAGGTATGGGCCTATTCACGTCAGATCAAGTGTTGTATACAGACAAAAGGTCCAAGGGAACTGTGGATCTTTGGGCCAGTAACTCAAAATCATTCCAAAATGCTTTTGTAACTGCAATGACAAAACTGGGCCGAGTTGGTGTGAAGACGGGGAGGAACGGAAATATTCGGTTTGATTGTGGAAGAATGAATTGAAGTGACATTTTACACAAATGGCCAATACTTATAGATTCTGTCCCAGTTAGCTTAATGGATTAAATTTGTCGAATAAATTAAAATTTTATTTTAATTACGCAAAAATTAGTTCGTTGAGTGTTGTCAAGGATAGGAGTTTATTTATATTTTTATTTGTAGGAAGGTGAGTCCTGAATAAGGGGATTAGTCTTGAACCTTCTAATGTTTATATGAAAAATAACAGTCCTATTGTGGGATGTGTAATTGTTG</gDNA_template>
            <first_frame> A  *  P  I  V  L  N  F  I  A  R  E  I  K  W  V  V  *  I  F  L  C  Q  Y  Y  Y  Q  F  Y  Q  L  V  L  C  *  C  L  T  W  H  L  H  N  *  R  P  I  I  T  P  I  F  V  L  M  L  N  P  L  L  E  M  L  L  T  R  N  S  N  K  L  L  S  L  S  L  L  F  S  V  S  S  S  M  I  A  L  L  R :   D  V  M  L  Q  *  L  Y  H  Q  H  Q  G  T  Q  L  R  R  I  I  Q  I  I  Y  H  W  Q  E  M  D  L  I  L  *  L  K  P  K  P  L  L  I  Q  T  H  V  V  K  I  K  S  L  V  L  T  F  S  L  *  P  P  E  M  S  F  S  C :   L  G  D  H  G  T  Q  W  N  *  E  G  L  M  G  S  H  Q  K  H  R  M  W  K  G  S  Y  Q  N  Q  H  S  I  S  I  N  S  I  L  C  L  P  L  M  V  *  L  R  L  T  *  S  P  F  L  :  R  P  I  L  L  V  F  L  I  V  A  N  F  P  T  G  S  T  T  S  A  L  K  I  Q  *  T  Q  P  L  T  S  N  M  Q  P  N  Y  K  G  C  V  Q  G  M  L  T  Q  E  *  P  L  T  W  I  P  K  L  Q  G  H  L  T  I  I  T  T  K  I  Y  N  K  V  W  A  Y  S  R  Q  I  K  C  C  I  Q  T  K  G  P  R  E  L  W  I  F  G  P  V  T  Q  N  H  S  K  M  L  L  *  L  Q  *  Q  N  W  A  E  L  V  *  R  R  G  G  T  E  I  F  G  L  I  V  E  E  *  I  E  V  T  F  Y  T  N  G  Q  Y  L  *  I  L  S  Q  L  A  *  W  I  K  F  V  E  *  I  K  I  L  F  *  L  R  K  N  *  F  V  E  C  C  Q  G  *  E  F  I  Y  I  F  I  C  R  K  V  S  P  E  *  G  D  *  S  *  T  F  *  C  L  Y  E  K  *  Q  S  Y  C  G  M  C  N  C   </first_frame>
            <second_frame>  H  N  P  L  Y  L  I  L  *  P  E  K  L  N  G  S  S  K  S  S  Y  V  S  I  I  I  N  F  I  S  *  Y  C  V  D  A  *  L  G  I  C  T  I  K  D  Q  L  L  R  Q  Y  L  S  *  C  *  I  H  C  *  K  C  C  *  P  E  I  Q  T  N  F  C  H  C  P  C  C  S  P  S  L  L  P  *  L  L  C  *   : G  M  *  C  F  S  D  C  I  I  N  T  R  E  H  S  *  E  G  S  F  R  *  S  I  I  G  R  R  W  I  *  Y  C  N  *  S  Q  S  R  C  *  F  K  L  T  L  *  K  *  S  L  L  C  *  H  S  R  F  S  H  Q  R  C  H  S  A   : V  W  G  T  M  V  P  S  G  I  R  K  A  *  W  V  H  I  K  S  I  E  C  G  R  E  A  T  K  T  N  I  Q  S  Q  S  T  Q  F  Y  V  C  L  S  W  S  N  S  G  *  H  D  R  P  F  C :   G  P  F  C  W  F  F  S  L  W  Q  I  F  Q  P  D  L  Q  L  Q  P  *  K  S  N  R  P  N  P  *  Q  A  I  C  S  P  I  T  R  D  V  S  K  E  C  *  P  K  N  S  H  *  H  G  S  Q  N  S  K  D  I  *  Q  *  L  L  Q  K  F  T  T  R  Y  G  P  I  H  V  R  S  S  V  V  Y  R  Q  K  V  Q  G  N  C  G  S  L  G  Q  *  L  K  I  I  P  K  C  F  C  N  C  N  D  K  T  G  P  S  W  C  E  D  G  E  E  R  K  Y  S  V  *  L  W  K  N  E  L  K  *  H  F  T  Q  M  A  N  T  Y  R  F  C  P  S  *  L  N  G  L  N  L  S  N  K  L  K  F  Y  F  N  Y  A  K  I  S  S  L  S  V  V  K  D  R  S  L  F  I  F  L  F  V  G  R  *  V  L  N  K  G  I  S  L  E  P  S  N  V  Y  M  K  N  N  S  P  I  V  G  C  V  I  V  </second_frame>
            <third_frame>   I  T  H  C  T  *  F  Y  S  Q  R  N  *  M  G  R  L  N  L  L  M  S  V  L  L  S  I  L  S  V  S  I  V  L  M  P  N  L  A  S  A  Q  L  K  T  N  Y  Y  A  N  I  C  P  N  V  E  S  I  V  R  N  V  V  N  Q  K  F  K  Q  T  F  V  T  V  P  A  V  L  R  L  F  F  H  D  C  F  V  E  :  G  C  D  A  S  V  I  V  S  S  T  P  G  N  T  A  E  K  D  H  S  D  N  L  S  L  A  G  D  G  F  D  T  V  I  K  A  K  A  A  V  D  S  N  S  R  C  K  N  K  V  S  C  A  D  I  L  A  L  A  T  R  D  V  I  Q  L  :  S  G  G  P  W  Y  P  V  E  L  G  R  L  D  G  F  T  S  K  A  S  N  V  E  G  K  L  P  K  P  T  F  N  L  N  Q  L  N  S  M  F  A  S  H  G  L  T  Q  A  D  M  I  A  L  S   : A  A  H  S  V  G  F  S  H  C  G  K  F  S  N  R  I  Y  N  F  S  P  K  N  P  I  D  P  T  L  N  K  Q  Y  A  A  Q  L  Q  G  M  C  P  R  N  V  D  P  R  I  A  I  D  M  D  P  K  T  P  R  T  F  D  N  N  Y  Y  K  N  L  Q  Q  G  M  G  L  F  T  S  D  Q  V  L  Y  T  D  K  R  S  K  G  T  V  D  L  W  A  S  N  S  K  S  F  Q  N  A  F  V  T  A  M  T  K  L  G  R  V  G  V  K  T  G  R  N  G  N  I  R  F  D  C  G  R  M  N  *  S  D  I  L  H  K  W  P  I  L  I  D  S  V  P  V  S  L  M  D  *  I  C  R  I  N  *  N  F  I  L  I  T  Q  K  L  V  R  *  V  L  S  R  I  G  V  Y  L  Y  F  Y  L  *  E  G  E  S  *  I  R  G  L  V  L  N  L  L  M  F  I  *  K  I  T  V  L  L  W  D  V  *  L  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0053H21.1" strand="-"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="54280" stop="54056"/>
                    <exon start="53886" stop="53686"/>
                    <exon start="53581" stop="53416"/>
                    <exon start="52569" stop="52163"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>996</number_coding_nucleotides>
                  <number_encoded_amino_acids>332</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>MGRLNLLMSVLLSILSVSIVLMPNLASAQLKTNYYANICPNVESIVRNVVNQKFKQTFVTVPAVLRLFFHDCFVEGCDASVIVSSTPGNTAEKDHSDNLSLAGDGFDTVIKAKAAVDSNSRCKNKVSCADILALATRDVIQLSGGPWYPVELGRLDGFTSKASNVEGKLPKPTFNLNQLNSMFASHGLTQADMIALSAAHSVGFSHCGKFSNRIYNFSPKNPIDPTLNKQYAAQLQGMCPRNVDPRIAIDMDPKTPRTFDNNYYKNLQQGMGLFTSDQVLYTDKRSKGTVDLWASNSKSFQNAFVTAMTKLGRVGVKTGRNGNIRFDCGRMN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="+" PGL_start="68516" PGL_stop="70821"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="68516" e_stop="69000"/>
            <exon e_start="69791" e_stop="69965"/>
            <exon e_start="70048" e_stop="70821"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.994" acc_prob="0.996" e_score="0.930"/>
          <exon-intron don_prob="1.000" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="0.986"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.930">
            <gDNA_exon_boundary e_start="68516" e_stop="69000" e_length="485"/>
          </exon>
          <intron i_serial="1" don_prob="0.994" acc_prob="0.996">
            <gDNA_intron_boundary i_start="69001" i_stop="69790" i_length="790"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="69791" e_stop="69965" e_length="175"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="0.999">
            <gDNA_intron_boundary i_start="69966" i_stop="70047" i_length="82"/>
          </intron>
          <exon e_serial="3" e_score="0.986">
            <gDNA_exon_boundary e_start="70048" e_stop="70821" e_length="774"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="68516" stop="69000"/>
              <exon start="69791" stop="69965"/>
              <exon start="70048" stop="70132"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U567764" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="68723" stop="69000"/>
              <exon start="69791" stop="69965"/>
              <exon start="70048" stop="70821"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U567766" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TAAAGTTAAAAAAATATGTTATCGTGATTAGAAAATGTTTAAATATTATGTGCACTGCTGGACTTGTCTGGGGGCATCTCTTTCACAAAACTCAAACCACATTGGCTAAGGGGACTGGATTTGTTTGGCATGCTTCCTCCCTAGTCCCCCCCTACATACCTATTTCACCCTCTTTTTTTTCCTATCAAACTCCAAAAATACAACAACATTTGCTTTGATTTCCGTGTGCTAAATGAGAATCTTAAATTCTTCCTTATCAGTCCTAATAATGATATTTTATTCTTTCCTCTTTTAATTTTATATATATAATATATATATATATATATATCTTTGGGGGTGCTCACTTTGGCAGTATATACTAGAGGCAAAATTAAAAGTGGGATGTTAATAAACTCTCTCAAACAAAGAAAAAGCCTAAAAGTCTCCAAGTTTTGGTTTTTAAACTCCTCAAAGTTCTTCTATTCGATCAATAAAGTACGTTGCAG : GTACTAATATACATTCCCAATTCCGGAGATACATTGAGTCAAATCGAAGAAACATCGTTCTCTTCCTCTTCTTTCTGTCTTTTTTATTTTAAAAATGGAGAAGCTTATCAATCCTTACGATAAGGAATACATGAAGATGGCGATGTTAAAGCATGAAGAGATCTTCAGAGAACAG : GTGTACGAACTGCATCGTCTATATCAAACACAGAAATTGCTGATGAGAAACATGTCAAGTAGTACTAATAATCGGCCTCAACAAGATCATCATCAAGTAGTGGTAAACCAATTAGACTCGAACAAAAAGATAACTGCTCGTCAATGTATTGACTTGGAAATAAGGCCAAATACAGACGAAGAACACATTGCAGAATCAGGTGGTGAAGATGATACTCATGAATTGGAATTAACATTAGGGCTATCAAGTTACAACGTTCGTCGAAGGAGAAAAACAGCTCATTTTGATTCTTCTTCACCAAGTTTTTCTTCATCTAATTCAACAGGATCTGCTTCTAGCCAAATAAAGAACACTACGACAAATTTAGTGAGAAATTCGAGGAATATTGAAGGTAGTAAATGGGGACTTGAAGAGAAATTGCCAGTTTCGAATAATTTTCAGATTGGTGCAAGAAGTTCACAAAGTAATCAAAATGTTGATCAAGAGCAATATAGATCACAAGATTCGTTGAATAATCCTCCTTGGCTTTTTCAAGTTTTGAGTTTGAATATGACGTAAAAAAAAAACTACTATTATTTAATTATGATGCTGATCGATGATTAATTAGTCGATCGGATGTGATAAGATTTTAGACTTTCATCCTACCGATCGACTACTTATGTAATTTAATTTTGTGTGAAATTTTAGTATCATCTTTTGTTTAATTCTAATCTCTTTGTTTAATTTGCTAACGGTATTTTCGGGATTCAACAGCCAAATATAGTTGATTTGGAT</gDNA_template>
            <first_frame> *  S  *  K  N  M  L  S  *  L  E  N  V  *  I  L  C  A  L  L  D  L  S  G  G  I  S  F  T  K  L  K  P  H  W  L  R  G  L  D  L  F  G  M  L  P  P  *  S  P  P  T  Y  L  F  H  P  L  F  F  P  I  K  L  Q  K  Y  N  N  I  C  F  D  F  R  V  L  N  E  N  L  K  F  F  L  I  S  P  N  N  D  I  L  F  F  P  L  L  I  L  Y  I  *  Y  I  Y  I  Y  I  S  L  G  V  L  T  L  A  V  Y  T  R  G  K  I  K  S  G  M  L  I  N  S  L  K  Q  R  K  S  L  K  V  S  K  F  W  F  L  N  S  S  K  F  F  Y  S  I  N  K  V  R  C  R :   Y  *  Y  T  F  P  I  P  E  I  H  *  V  K  S  K  K  H  R  S  L  P  L  L  S  V  F  F  I  L  K  M  E  K  L  I  N  P  Y  D  K  E  Y  M  K  M  A  M  L  K  H  E  E  I  F  R  E  Q  :  V  Y  E  L  H  R  L  Y  Q  T  Q  K  L  L  M  R  N  M  S  S  S  T  N  N  R  P  Q  Q  D  H  H  Q  V  V  V  N  Q  L  D  S  N  K  K  I  T  A  R  Q  C  I  D  L  E  I  R  P  N  T  D  E  E  H  I  A  E  S  G  G  E  D  D  T  H  E  L  E  L  T  L  G  L  S  S  Y  N  V  R  R  R  R  K  T  A  H  F  D  S  S  S  P  S  F  S  S  S  N  S  T  G  S  A  S  S  Q  I  K  N  T  T  T  N  L  V  R  N  S  R  N  I  E  G  S  K  W  G  L  E  E  K  L  P  V  S  N  N  F  Q  I  G  A  R  S  S  Q  S  N  Q  N  V  D  Q  E  Q  Y  R  S  Q  D  S  L  N  N  P  P  W  L  F  Q  V  L  S  L  N  M  T  *  K  K  N  Y  Y  Y  L  I  M  M  L  I  D  D  *  L  V  D  R  M  *  *  D  F  R  L  S  S  Y  R  S  T  T  Y  V  I  *  F  C  V  K  F  *  Y  H  L  L  F  N  S  N  L  F  V  *  F  A  N  G  I  F  G  I  Q  Q  P  N  I  V  D  L  D </first_frame>
            <second_frame>  K  V  K  K  I  C  Y  R  D  *  K  M  F  K  Y  Y  V  H  C  W  T  C  L  G  A  S  L  S  Q  N  S  N  H  I  G  *  G  D  W  I  C  L  A  C  F  L  P  S  P  P  L  H  T  Y  F  T  L  F  F  F  L  S  N  S  K  N  T  T  T  F  A  L  I  S  V  C  *  M  R  I  L  N  S  S  L  S  V  L  I  M  I  F  Y  S  F  L  F  *  F  Y  I  Y  N  I  Y  I  Y  I  Y  L  W  G  C  S  L  W  Q  Y  I  L  E  A  K  L  K  V  G  C  *  *  T  L  S  N  K  E  K  A  *  K  S  P  S  F  G  F  *  T  P  Q  S  S  S  I  R  S  I  K  Y  V  A   : G  T  N  I  H  S  Q  F  R  R  Y  I  E  S  N  R  R  N  I  V  L  F  L  F  F  L  S  F  L  F  *  K  W  R  S  L  S  I  L  T  I  R  N  T  *  R  W  R  C  *  S  M  K  R  S  S  E  N  R :   C  T  N  C  I  V  Y  I  K  H  R  N  C  *  *  E  T  C  Q  V  V  L  I  I  G  L  N  K  I  I  I  K  *  W  *  T  N  *  T  R  T  K  R  *  L  L  V  N  V  L  T  W  K  *  G  Q  I  Q  T  K  N  T  L  Q  N  Q  V  V  K  M  I  L  M  N  W  N  *  H  *  G  Y  Q  V  T  T  F  V  E  G  E  K  Q  L  I  L  I  L  L  H  Q  V  F  L  H  L  I  Q  Q  D  L  L  L  A  K  *  R  T  L  R  Q  I  *  *  E  I  R  G  I  L  K  V  V  N  G  D  L  K  R  N  C  Q  F  R  I  I  F  R  L  V  Q  E  V  H  K  V  I  K  M  L  I  K  S  N  I  D  H  K  I  R  *  I  I  L  L  G  F  F  K  F  *  V  *  I  *  R  K  K  K  T  T  I  I  *  L  *  C  *  S  M  I  N  *  S  I  G  C  D  K  I  L  D  F  H  P  T  D  R  L  L  M  *  F  N  F  V  *  N  F  S  I  I  F  C  L  I  L  I  S  L  F  N  L  L  T  V  F  S  G  F  N  S  Q  I  *  L  I  W   </second_frame>
            <third_frame>   K  L  K  K  Y  V  I  V  I  R  K  C  L  N  I  M  C  T  A  G  L  V  W  G  H  L  F  H  K  T  Q  T  T  L  A  K  G  T  G  F  V  W  H  A  S  S  L  V  P  P  Y  I  P  I  S  P  S  F  F  S  Y  Q  T  P  K  I  Q  Q  H  L  L  *  F  P  C  A  K  *  E  S  *  I  L  P  Y  Q  S  *  *  *  Y  F  I  L  S  S  F  N  F  I  Y  I  I  Y  I  Y  I  Y  I  F  G  G  A  H  F  G  S  I  Y  *  R  Q  N  *  K  W  D  V  N  K  L  S  Q  T  K  K  K  P  K  S  L  Q  V  L  V  F  K  L  L  K  V  L  L  F  D  Q  *  S  T  L  Q  :  V  L  I  Y  I  P  N  S  G  D  T  L  S  Q  I  E  E  T  S  F  S  S  S  S  F  C  L  F  Y  F  K  N  G  E  A  Y  Q  S  L  R  *  G  I  H  E  D  G  D  V  K  A  *  R  D  L  Q  R  T   : G  V  R  T  A  S  S  I  S  N  T  E  I  A  D  E  K  H  V  K  *  Y  *  *  S  A  S  T  R  S  S  S  S  S  G  K  P  I  R  L  E  Q  K  D  N  C  S  S  M  Y  *  L  G  N  K  A  K  Y  R  R  R  T  H  C  R  I  R  W  *  R  *  Y  S  *  I  G  I  N  I  R  A  I  K  L  Q  R  S  S  K  E  K  N  S  S  F  *  F  F  F  T  K  F  F  F  I  *  F  N  R  I  C  F  *  P  N  K  E  H  Y  D  K  F  S  E  K  F  E  E  Y  *  R  *  *  M  G  T  *  R  E  I  A  S  F  E  *  F  S  D  W  C  K  K  F  T  K  *  S  K  C  *  S  R  A  I  *  I  T  R  F  V  E  *  S  S  L  A  F  S  S  F  E  F  E  Y  D  V  K  K  K  L  L  L  F  N  Y  D  A  D  R  *  L  I  S  R  S  D  V  I  R  F  *  T  F  I  L  P  I  D  Y  L  C  N  L  I  L  C  E  I  L  V  S  S  F  V  *  F  *  S  L  C  L  I  C  *  R  Y  F  R  D  S  T  A  K  Y  S  *  F  G  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0053H21.1" strand="+"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="69828" stop="69965"/>
                    <exon start="70048" stop="70605"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>693</number_coding_nucleotides>
                  <number_encoded_amino_acids>231</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VKSKKHRSLPLLSVFFILKMEKLINPYDKEYMKMAMLKHEEIFREQVYELHRLYQTQKLLMRNMSSSTNNRPQQDHHQVVVNQLDSNKKITARQCIDLEIRPNTDEEHIAESGGEDDTHELELTLGLSSYNVRRRRKTAHFDSSSPSFSSSNSTGSASSQIKNTTTNLVRNSRNIEGSKWGLEEKLPVSNNFQIGARSSQSNQNVDQEQYRSQDSLNNPPWLFQVLSLNMT*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0053H21.1" strand="+"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="68518" stop="68733"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>213</number_coding_nucleotides>
                  <number_encoded_amino_acids>71</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KLKKYVIVIRKCLNIMCTAGLVWGHLFHKTQTTLAKGTGFVWHASSLVPPYIPISPSFFSYQTPKIQQHLL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="68573" e_stop="68989"/>
            <exon e_start="69791" e_stop="69866"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.996" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="68573" e_stop="68989" e_length="417"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.996">
            <gDNA_intron_boundary i_start="68990" i_stop="69790" i_length="801"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="69791" e_stop="69866" e_length="76"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="68573" stop="68989"/>
              <exon start="69791" stop="69866"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U588484" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTGGACTTGTCTGGGGGCATCTCTTTCACAAAACTCAAACCACATTGGCTAAGGGGACTGGATTTGTTTGGCATGCTTCCTCCCTAGTCCCCCCCTACATACCTATTTCACCCTCTTTTTTTTCCTATCAAACTCCAAAAATACAACAACATTTGCTTTGATTTCCGTGTGCTAAATGAGAATCTTAAATTCTTCCTTATCAGTCCTAATAATGATATTTTATTCTTTCCTCTTTTAATTTTATATATATAATATATATATATATATATATCTTTGGGGGTGCTCACTTTGGCAGTATATACTAGAGGCAAAATTAAAAGTGGGATGTTAATAAACTCTCTCAAACAAAGAAAAAGCCTAAAAGTCTCCAAGTTTTGGTTTTTAAACTCCTCAAAGTTCTTCTATTCGATCAATAAA : GTACTAATATACATTCCCAATTCCGGAGATACATTGAGTCAAATCGAAGAAACATCGTTCTCTTCCTCTTCTTTCT</gDNA_template>
            <first_frame> L  D  L  S  G  G  I  S  F  T  K  L  K  P  H  W  L  R  G  L  D  L  F  G  M  L  P  P  *  S  P  P  T  Y  L  F  H  P  L  F  F  P  I  K  L  Q  K  Y  N  N  I  C  F  D  F  R  V  L  N  E  N  L  K  F  F  L  I  S  P  N  N  D  I  L  F  F  P  L  L  I  L  Y  I  *  Y  I  Y  I  Y  I  S  L  G  V  L  T  L  A  V  Y  T  R  G  K  I  K  S  G  M  L  I  N  S  L  K  Q  R  K  S  L  K  V  S  K  F  W  F  L  N  S  S  K  F  F  Y  S  I  N  K  :  V  L  I  Y  I  P  N  S  G  D  T  L  S  Q  I  E  E  T  S  F  S  S  S  S  F  </first_frame>
            <second_frame>  W  T  C  L  G  A  S  L  S  Q  N  S  N  H  I  G  *  G  D  W  I  C  L  A  C  F  L  P  S  P  P  L  H  T  Y  F  T  L  F  F  F  L  S  N  S  K  N  T  T  T  F  A  L  I  S  V  C  *  M  R  I  L  N  S  S  L  S  V  L  I  M  I  F  Y  S  F  L  F  *  F  Y  I  Y  N  I  Y  I  Y  I  Y  L  W  G  C  S  L  W  Q  Y  I  L  E  A  K  L  K  V  G  C  *  *  T  L  S  N  K  E  K  A  *  K  S  P  S  F  G  F  *  T  P  Q  S  S  S  I  R  S  I  K :   Y  *  Y  T  F  P  I  P  E  I  H  *  V  K  S  K  K  H  R  S  L  P  L  L  S </second_frame>
            <third_frame>   G  L  V  W  G  H  L  F  H  K  T  Q  T  T  L  A  K  G  T  G  F  V  W  H  A  S  S  L  V  P  P  Y  I  P  I  S  P  S  F  F  S  Y  Q  T  P  K  I  Q  Q  H  L  L  *  F  P  C  A  K  *  E  S  *  I  L  P  Y  Q  S  *  *  *  Y  F  I  L  S  S  F  N  F  I  Y  I  I  Y  I  Y  I  Y  I  F  G  G  A  H  F  G  S  I  Y  *  R  Q  N  *  K  W  D  V  N  K  L  S  Q  T  K  K  K  P  K  S  L  Q  V  L  V  F  K  L  L  K  V  L  L  F  D  Q  *   : S  T  N  I  H  S  Q  F  R  R  Y  I  E  S  N  R  R  N  I  V  L  F  L  F  F   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0053H21.1" strand="+"/>
                <serials PGL_serial="13" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="68825" stop="68989"/>
                    <exon start="69791" stop="69865"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>240</number_coding_nucleotides>
                  <number_encoded_amino_acids>80</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>YIYIYISLGVLTLAVYTRGKIKSGMLINSLKQRKSLKVSKFWFLNSSKFFYSINKVLIYIPNSGDTLSQIEETSFSSSSF</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="-" PGL_start="70750" PGL_stop="70153"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="70750" e_stop="70153"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.913"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.913">
            <gDNA_exon_boundary e_start="70750" e_stop="70153" e_length="598"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70750" stop="70153"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U588488" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TAAACAAAAGATGATACTAAAATTTCACACAAAATTAAATTACATAAGTAGTCGATCGGTAGGATGAAAGTCTAAAATCTTATCACATCCGATCGACTAATTAATCATCGATCAGCATCATAATTAAATAATAGTAGTTTTTTTTTTACGTCATATTCAAACTCAAAACTTGAAAAAGCCAAGGAGGATTATTCAACGAATCTTGTGATCTATATTGCTCTTGATCAACATTTTGATTACTTTGTGAACTTCTTGCACCAATCTGAAAATTATTCGAAACTGGCAATTTCTCTTCAAGTCCCCATTTACTACCTTCAATATTCCTCGAATTTCTCACTAAATTTGTCGTAGTGTTCTTTATTTGGCTAGAAGCAGATCCTGTTGAATTAGATGAAGAAAAACTTGGTGAAGAAGAATCAAAATGAGCTGTTTTTCTCCTTCGACGAACGTTGTAACTTGATAGCCCTAATGTTAATTCCAATTCATGAGTATCATCTTCACCACCTGATTCTGCAATGTGTTCTTCGTCTGTATTTGGCCTTATTTCCAAGTCAATACATTGACGAGCAGTTATCTTTTTGTTCGAGTCTAATTGGTT</gDNA_template>
            <first_frame> *  T  K  D  D  T  K  I  S  H  K  I  K  L  H  K  *  S  I  G  R  M  K  V  *  N  L  I  T  S  D  R  L  I  N  H  R  S  A  S  *  L  N  N  S  S  F  F  F  T  S  Y  S  N  S  K  L  E  K  A  K  E  D  Y  S  T  N  L  V  I  Y  I  A  L  D  Q  H  F  D  Y  F  V  N  F  L  H  Q  S  E  N  Y  S  K  L  A  I  S  L  Q  V  P  I  Y  Y  L  Q  Y  S  S  N  F  S  L  N  L  S  *  C  S  L  F  G  *  K  Q  I  L  L  N  *  M  K  K  N  L  V  K  K  N  Q  N  E  L  F  F  S  F  D  E  R  C  N  L  I  A  L  M  L  I  P  I  H  E  Y  H  L  H  H  L  I  L  Q  C  V  L  R  L  Y  L  A  L  F  P  S  Q  Y  I  D  E  Q  L  S  F  C  S  S  L  I  G  </first_frame>
            <second_frame>  K  Q  K  M  I  L  K  F  H  T  K  L  N  Y  I  S  S  R  S  V  G  *  K  S  K  I  L  S  H  P  I  D  *  L  I  I  D  Q  H  H  N  *  I  I  V  V  F  F  L  R  H  I  Q  T  Q  N  L  K  K  P  R  R  I  I  Q  R  I  L  *  S  I  L  L  L  I  N  I  L  I  T  L  *  T  S  C  T  N  L  K  I  I  R  N  W  Q  F  L  F  K  S  P  F  T  T  F  N  I  P  R  I  S  H  *  I  C  R  S  V  L  Y  L  A  R  S  R  S  C  *  I  R  *  R  K  T  W  *  R  R  I  K  M  S  C  F  S  P  S  T  N  V  V  T  *  *  P  *  C  *  F  Q  F  M  S  I  I  F  T  T  *  F  C  N  V  F  F  V  C  I  W  P  Y  F  Q  V  N  T  L  T  S  S  Y  L  F  V  R  V  *  L  V </second_frame>
            <third_frame>   N  K  R  *  Y  *  N  F  T  Q  N  *  I  T  *  V  V  D  R  *  D  E  S  L  K  S  Y  H  I  R  S  T  N  *  S  S  I  S  I  I  I  K  *  *  *  F  F  F  Y  V  I  F  K  L  K  T  *  K  S  Q  G  G  L  F  N  E  S  C  D  L  Y  C  S  *  S  T  F  *  L  L  C  E  L  L  A  P  I  *  K  L  F  E  T  G  N  F  S  S  S  P  H  L  L  P  S  I  F  L  E  F  L  T  K  F  V  V  V  F  F  I  W  L  E  A  D  P  V  E  L  D  E  E  K  L  G  E  E  E  S  K  *  A  V  F  L  L  R  R  T  L  *  L  D  S  P  N  V  N  S  N  S  *  V  S  S  S  P  P  D  S  A  M  C  S  S  S  V  F  G  L  I  S  K  S  I  H  *  R  A  V  I  F  L  F  E  S  N  W   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0053H21.1" strand="-"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="70627" stop="70400"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>225</number_coding_nucleotides>
                  <number_encoded_amino_acids>75</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LNNSSFFFTSYSNSKLEKAKEDYSTNLVIYIALDQHFDYFVNFLHQSENYSKLAISLQVPIYYLQYSSNFSLNLS*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0053H21.1" strand="-"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="70360" stop="70154"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>207</number_coding_nucleotides>
                  <number_encoded_amino_acids>69</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>MKKNLVKKNQNELFFSFDERCNLIALMLIPIHEYHLHHLILQCVLRLYLALFPSQYIDEQLSFCSSLIG</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="15" PGL_strand="-" PGL_start="77299" PGL_stop="75345"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="77299" e_stop="77073"/>
            <exon e_start="76953" e_stop="76884"/>
            <exon e_start="76504" e_stop="75890"/>
            <exon e_start="75808" e_stop="75345"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.965" e_score="1.000"/>
          <exon-intron don_prob="0.753" acc_prob="1.000" e_score="0.997"/>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="77299" e_stop="77073" e_length="227"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.995">
            <gDNA_intron_boundary i_start="77072" i_stop="76954" i_length="119"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="76953" e_stop="76884" e_length="70"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.965">
            <gDNA_intron_boundary i_start="76883" i_stop="76505" i_length="379"/>
          </intron>
          <exon e_serial="3" e_score="0.997">
            <gDNA_exon_boundary e_start="76504" e_stop="75890" e_length="615"/>
          </exon>
          <intron i_serial="3" don_prob="0.753" acc_prob="1.000">
            <gDNA_intron_boundary i_start="75889" i_stop="75809" i_length="81"/>
          </intron>
          <exon e_serial="4" e_score="0.998">
            <gDNA_exon_boundary e_start="75808" e_stop="75345" e_length="464"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="77299" stop="77073"/>
              <exon start="76953" stop="76884"/>
              <exon start="76504" stop="75890"/>
              <exon start="75808" stop="75345"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U574292" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TGAACTTACAGAAGCAAAGAAAATGGCAACAAACATGTCTTTCTATTGTTTGCTTCATTAGGAAATAGTTTAAGGGAAAACGAATGAACATGGTTAAGGCCCGTAAAAGACTCGATCACCCATGGTGGATGACATGTTGATCTTGATAATGAACAACCTTCTACTCTAAACAGTATGTCCACTAAAAAGGAGCTTCTTTTCTCTGCTACAAAGAGGACCTCTCAATG : GATTTTCTCCCAGGAGATCCCAAGTGATGTGACTGTAAATGCCGCAGGAATCTCCTTTACACTACACAAG : TTCCCATTAGTTTCAAAGAGTGGATACATAAGGAAGTTGGTCTCGGAATCCAATGATGCTGACGTTTCTACGATCGAAATCCCTGATATACCTGGTGGAGGAGAGGCATTTGAATTTGCAGCAAAGTTTTGTTATGGAATAAATTTTGAGATAAGCACAAGAAACATTGCCTTGCTGAGATGTGCAGCAGAATATCTTGAGATGACAGAAGACTATGCAGTTGCAAATTTGGTGGGAAGAACTGAGGACTACTTTAGTGAAGTAGGAATTGAGAGCCTTCATAGTGCTGTTACAATTTTGCATTCATCAGAAAATCTTATTCCCATTTCAGAGAAAGTGAAATTGGTGAGCCGCTGCATTGACACAATTGCATATATAGCCTGTAAGGATAACCAATTCTCCACATCAGGTTGAGCAGAAGCTGGTATCTATGGATTGACTTCCTCCATGTTTTCGAACCCGAAGTCTATAGTTAACTGGTGGTCGGAGGATTTAACCGTCCTTAGAATTGATTTTTTCCAAAGGGTTCTGATTGCAATGATGGGAAGGGGATTCAAGCAGTATGCACTTGGACCAATATTAATGCTCTATGCACAGAAGTCTCTTCGTTGTTTG : GAAATATTTGGAAAGGGAAGGAAAAAGATTGAACCAAAACAAGAACATGAAAAAAGGGTTGTTGTAGAAACCATCGTTGGTCTTCTGCCAAGGGAGAAAAATGCATTATCCGTTAGCTTTTGTCAATGCTTCTCCGAGCTGCAATATATCTGCAGACCACGATGGCTGGCAGGCTCGACTTGGAGAAGAGGATGGATTGCAGCTTGGACAGGCTGTATTGGATGTATCTGTTAATTCCTTCATATTCCTTCAGAGGGGACACTTTGTTTGATGTTGAAATCATGCAGCTTATTGTGATGAATTTCCTTGCCTATGATATGGAGGAAAATCATTGGGAGATGAAGAGTATAATGAGTCTCATTCATTAAGAGACATGGAGCGAGTTGGGGAACTTATGGAAAATTACCTTGCTAAAATAGCTTCTGACCGTAATCTATCCATCACAAGCTTCATTAATCTTGCTG</gDNA_template>
            <first_frame> *  T  Y  R  S  K  E  N  G  N  K  H  V  F  L  L  F  A  S  L  G  N  S  L  R  E  N  E  *  T  W  L  R  P  V  K  D  S  I  T  H  G  G  *  H  V  D  L  D  N  E  Q  P  S  T  L  N  S  M  S  T  K  K  E  L  L  F  S  A  T  K  R  T  S  Q  W :   I  F  S  Q  E  I  P  S  D  V  T  V  N  A  A  G  I  S  F  T  L  H  K  :  F  P  L  V  S  K  S  G  Y  I  R  K  L  V  S  E  S  N  D  A  D  V  S  T  I  E  I  P  D  I  P  G  G  G  E  A  F  E  F  A  A  K  F  C  Y  G  I  N  F  E  I  S  T  R  N  I  A  L  L  R  C  A  A  E  Y  L  E  M  T  E  D  Y  A  V  A  N  L  V  G  R  T  E  D  Y  F  S  E  V  G  I  E  S  L  H  S  A  V  T  I  L  H  S  S  E  N  L  I  P  I  S  E  K  V  K  L  V  S  R  C  I  D  T  I  A  Y  I  A  C  K  D  N  Q  F  S  T  S  G  *  A  E  A  G  I  Y  G  L  T  S  S  M  F  S  N  P  K  S  I  V  N  W  W  S  E  D  L  T  V  L  R  I  D  F  F  Q  R  V  L  I  A  M  M  G  R  G  F  K  Q  Y  A  L  G  P  I  L  M  L  Y  A  Q  K  S  L  R  C  L  :  E  I  F  G  K  G  R  K  K  I  E  P  K  Q  E  H  E  K  R  V  V  V  E  T  I  V  G  L  L  P  R  E  K  N  A  L  S  V  S  F  C  Q  C  F  S  E  L  Q  Y  I  C  R  P  R  W  L  A  G  S  T  W  R  R  G  W  I  A  A  W  T  G  C  I  G  C  I  C  *  F  L  H  I  P  S  E  G  T  L  C  L  M  L  K  S  C  S  L  L  *  *  I  S  L  P  M  I  W  R  K  I  I  G  R  *  R  V  *  *  V  S  F  I  K  R  H  G  A  S  W  G  T  Y  G  K  L  P  C  *  N  S  F  *  P  *  S  I  H  H  K  L  H  *  S  C   </first_frame>
            <second_frame>  E  L  T  E  A  K  K  M  A  T  N  M  S  F  Y  C  L  L  H  *  E  I  V  *  G  K  T  N  E  H  G  *  G  P  *  K  T  R  S  P  M  V  D  D  M  L  I  L  I  M  N  N  L  L  L  *  T  V  C  P  L  K  R  S  F  F  S  L  L  Q  R  G  P  L  N   : G  F  S  P  R  R  S  Q  V  M  *  L  *  M  P  Q  E  S  P  L  H  Y  T  S :   S  H  *  F  Q  R  V  D  T  *  G  S  W  S  R  N  P  M  M  L  T  F  L  R  S  K  S  L  I  Y  L  V  E  E  R  H  L  N  L  Q  Q  S  F  V  M  E  *  I  L  R  *  A  Q  E  T  L  P  C  *  D  V  Q  Q  N  I  L  R  *  Q  K  T  M  Q  L  Q  I  W  W  E  E  L  R  T  T  L  V  K  *  E  L  R  A  F  I  V  L  L  Q  F  C  I  H  Q  K  I  L  F  P  F  Q  R  K  *  N  W  *  A  A  A  L  T  Q  L  H  I  *  P  V  R  I  T  N  S  P  H  Q  V  E  Q  K  L  V  S  M  D  *  L  P  P  C  F  R  T  R  S  L  *  L  T  G  G  R  R  I  *  P  S  L  E  L  I  F  S  K  G  F  *  L  Q  *  W  E  G  D  S  S  S  M  H  L  D  Q  Y  *  C  S  M  H  R  S  L  F  V  V  W :   K  Y  L  E  R  E  G  K  R  L  N  Q  N  K  N  M  K  K  G  L  L  *  K  P  S  L  V  F  C  Q  G  R  K  M  H  Y  P  L  A  F  V  N  A  S  P  S  C  N  I  S  A  D  H  D  G  W  Q  A  R  L  G  E  E  D  G  L  Q  L  G  Q  A  V  L  D  V  S  V  N  S  F  I  F  L  Q  R  G  H  F  V  *  C  *  N  H  A  A  Y  C  D  E  F  P  C  L  *  Y  G  G  K  S  L  G  D  E  E  Y  N  E  S  H  S  L  R  D  M  E  R  V  G  E  L  M  E  N  Y  L  A  K  I  A  S  D  R  N  L  S  I  T  S  F  I  N  L  A  </second_frame>
            <third_frame>   N  L  Q  K  Q  R  K  W  Q  Q  T  C  L  S  I  V  C  F  I  R  K  *  F  K  G  K  R  M  N  M  V  K  A  R  K  R  L  D  H  P  W  W  M  T  C  *  S  *  *  *  T  T  F  Y  S  K  Q  Y  V  H  *  K  G  A  S  F  L  C  Y  K  E  D  L  S  M  :  D  F  L  P  G  D  P  K  *  C  D  C  K  C  R  R  N  L  L  Y  T  T  Q   : V  P  I  S  F  K  E  W  I  H  K  E  V  G  L  G  I  Q  *  C  *  R  F  Y  D  R  N  P  *  Y  T  W  W  R  R  G  I  *  I  C  S  K  V  L  L  W  N  K  F  *  D  K  H  K  K  H  C  L  A  E  M  C  S  R  I  S  *  D  D  R  R  L  C  S  C  K  F  G  G  K  N  *  G  L  L  *  *  S  R  N  *  E  P  S  *  C  C  Y  N  F  A  F  I  R  K  S  Y  S  H  F  R  E  S  E  I  G  E  P  L  H  *  H  N  C  I  Y  S  L  *  G  *  P  I  L  H  I  R  L  S  R  S  W  Y  L  W  I  D  F  L  H  V  F  E  P  E  V  Y  S  *  L  V  V  G  G  F  N  R  P  *  N  *  F  F  P  K  G  S  D  C  N  D  G  K  G  I  Q  A  V  C  T  W  T  N  I  N  A  L  C  T  E  V  S  S  L  F   : G  N  I  W  K  G  K  E  K  D  *  T  K  T  R  T  *  K  K  G  C  C  R  N  H  R  W  S  S  A  K  G  E  K  C  I  I  R  *  L  L  S  M  L  L  R  A  A  I  Y  L  Q  T  T  M  A  G  R  L  D  L  E  K  R  M  D  C  S  L  D  R  L  Y  W  M  Y  L  L  I  P  S  Y  S  F  R  G  D  T  L  F  D  V  E  I  M  Q  L  I  V  M  N  F  L  A  Y  D  M  E  E  N  H  W  E  M  K  S  I  M  S  L  I  H  *  E  T  W  S  E  L  G  N  L  W  K  I  T  L  L  K  *  L  L  T  V  I  Y  P  S  Q  A  S  L  I  L  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0053H21.1" strand="-"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="77167" stop="77073"/>
                    <exon start="76953" stop="76884"/>
                    <exon start="76504" stop="76091"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>576</number_coding_nucleotides>
                  <number_encoded_amino_acids>192</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>HVDLDNEQPSTLNSMSTKKELLFSATKRTSQWIFSQEIPSDVTVNAAGISFTLHKFPLVSKSGYIRKLVSESNDADVSTIEIPDIPGGGEAFEFAAKFCYGINFEISTRNIALLRCAAEYLEMTEDYAVANLVGRTEDYFSEVGIESLHSAVTILHSSENLIPISEKVKLVSRCIDTIAYIACKDNQFSTSG*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0053H21.1" strand="-"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="76090" stop="75890"/>
                    <exon start="75808" stop="75575"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>432</number_coding_nucleotides>
                  <number_encoded_amino_acids>144</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>AEAGIYGLTSSMFSNPKSIVNWWSEDLTVLRIDFFQRVLIAMMGRGFKQYALGPILMLYAQKSLRCLEIFGKGRKKIEPKQEHEKRVVVETIVGLLPREKNALSVSFCQCFSELQYICRPRWLAGSTWRRGWIAAWTGCIGCIC*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="16" PGL_strand="-" PGL_start="78142" PGL_stop="77669"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="78142" e_stop="77669"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.996">
            <gDNA_exon_boundary e_start="78142" e_stop="77669" e_length="474"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="78142" stop="77669"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U598021" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="16" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCATAGGTTTTGCTAATTCAACCAAGAAAATAGTTTAATTATGTAGGAAAGATCTTAATATGATGTGAAAATGACATTCCTGGAGGAGCCTATTGACGTCCTACACCAGCTATTCATTATTGACAATTGCCGTAGCTATCATTTGTCAGACAAATTTCAGTGGATATGCTTTCAGTCTGAGACTATTACCTAGCCAGGTCTAGGGTCCAATTAATCCGTACTAGCTTTGAACTAACATTGCAAAACTTGTCTTCACCCTTCTACTGGTGGATTTGGGTTATAGGGCAGGTGCGATCACACCTACTTTGGATACAATTGGGAACAATAACAATTAAAGTATCAAGAAACGAAATTCGATATCAGCTGGTTTGATATGTACCCCGATGGTTTTTTGCAGACAAGGAAGACCAAATAAAACTAGGTAAATGCCACTATAAACTTACACAATTCTTAACTGGTAAATAATTTCAATTT</gDNA_template>
            <first_frame> S  *  V  L  L  I  Q  P  R  K  *  F  N  Y  V  G  K  I  L  I  *  C  E  N  D  I  P  G  G  A  Y  *  R  P  T  P  A  I  H  Y  *  Q  L  P  *  L  S  F  V  R  Q  I  S  V  D  M  L  S  V  *  D  Y  Y  L  A  R  S  R  V  Q  L  I  R  T  S  F  E  L  T  L  Q  N  L  S  S  P  F  Y  W  W  I  W  V  I  G  Q  V  R  S  H  L  L  W  I  Q  L  G  T  I  T  I  K  V  S  R  N  E  I  R  Y  Q  L  V  *  Y  V  P  R  W  F  F  A  D  K  E  D  Q  I  K  L  G  K  C  H  Y  K  L  T  Q  F  L  T  G  K  *  F  Q  F </first_frame>
            <second_frame>  H  R  F  C  *  F  N  Q  E  N  S  L  I  M  *  E  R  S  *  Y  D  V  K  M  T  F  L  E  E  P  I  D  V  L  H  Q  L  F  I  I  D  N  C  R  S  Y  H  L  S  D  K  F  Q  W  I  C  F  Q  S  E  T  I  T  *  P  G  L  G  S  N  *  S  V  L  A  L  N  *  H  C  K  T  C  L  H  P  S  T  G  G  F  G  L  *  G  R  C  D  H  T  Y  F  G  Y  N  W  E  Q  *  Q  L  K  Y  Q  E  T  K  F  D  I  S  W  F  D  M  Y  P  D  G  F  L  Q  T  R  K  T  K  *  N  *  V  N  A  T  I  N  L  H  N  S  *  L  V  N  N  F  N   </second_frame>
            <third_frame>   I  G  F  A  N  S  T  K  K  I  V  *  L  C  R  K  D  L  N  M  M  *  K  *  H  S  W  R  S  L  L  T  S  Y  T  S  Y  S  L  L  T  I  A  V  A  I  I  C  Q  T  N  F  S  G  Y  A  F  S  L  R  L  L  P  S  Q  V  *  G  P  I  N  P  Y  *  L  *  T  N  I  A  K  L  V  F  T  L  L  L  V  D  L  G  Y  R  A  G  A  I  T  P  T  L  D  T  I  G  N  N  N  N  *  S  I  K  K  R  N  S  I  S  A  G  L  I  C  T  P  M  V  F  C  R  Q  G  R  P  N  K  T  R  *  M  P  L  *  T  Y  T  I  L  N  W  *  I  I  S  I  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02SLe0053H21.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="17" PGL_strand="-" PGL_start="82172" PGL_stop="78674"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="82172" e_stop="82137"/>
            <exon e_start="79361" e_stop="78674"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.962" acc_prob="0.883" e_score="1.000"/>
          <exon-only e_score="0.988"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="82172" e_stop="82137" e_length="36"/>
          </exon>
          <intron i_serial="1" don_prob="0.962" acc_prob="0.883">
            <gDNA_intron_boundary i_start="82136" i_stop="79362" i_length="2775"/>
          </intron>
          <exon e_serial="2" e_score="0.988">
            <gDNA_exon_boundary e_start="79361" e_stop="78674" e_length="688"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82172" stop="82137"/>
              <exon start="79361" stop="78674"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U600214" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="17" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTAGAAGCGCTTAACACTTCCGGCGGAGATAGTCCG : CATCTAGCATAAAGGAGCCCACGATGCAGCTTCTGCTATCTTTATAGCTGGAGAATAAGTGACTCAGGACTTAAGAATGTGTAGATGACAGGTCATCTTATATATTATTGTGTATCTATGGTCTCTCGTGTCTGAAGGTAATGCTTTTTGAATTTTTTTTGCTGGATTTTATCTTATATGGATTCCAACCCAGCAAGAATCTGAACTGGAACTGGTCCAAAAATTATTCGTGTAGTAGTGGGCCTTGTTCATGCTTCTCTTATATCACTGTCACCATGGGCACTGCTTATCGAATCTTAGTTACAAGAAACCTTGTTTTTGATACTCAGCTAGTAAAAAATGCAAATTGACACTAAAGTTACATTAGTTAAACACTTTGTAATCCTTTAACATAAACTTAGATGGGGTAAGTCTTATCCCAAACAAAAAGAGAATACACAAAGAAGATGTGCAGCTCCTTGCTTAAATTGTTTTCTGTAGTTGCTGTGCTAGTGTAACGGAGCGATTCACGAGCTGGAGTTTGTCAGTTGAGTAGAATTTTGTCTTGGTGTCATTCATTCACTGGGAAGATTATTGTTTAGATGGACTTGTAAAAAGTAACTTATAAGTCAAAAGCTAAAAGTCACAAGTAGATGATACCCTACTTTTGACTTTTGGTTTATTTTAAAACTCTTTTGGCCTAAAAGTA</gDNA_template>
            <first_frame> L  E  A  L  N  T  S  G  G  D  S  P  :  H  L  A  *  R  S  P  R  C  S  F  C  Y  L  Y  S  W  R  I  S  D  S  G  L  K  N  V  *  M  T  G  H  L  I  Y  Y  C  V  S  M  V  S  R  V  *  R  *  C  F  L  N  F  F  C  W  I  L  S  Y  M  D  S  N  P  A  R  I  *  T  G  T  G  P  K  I  I  R  V  V  V  G  L  V  H  A  S  L  I  S  L  S  P  W  A  L  L  I  E  S  *  L  Q  E  T  L  F  L  I  L  S  *  *  K  M  Q  I  D  T  K  V  T  L  V  K  H  F  V  I  L  *  H  K  L  R  W  G  K  S  Y  P  K  Q  K  E  N  T  Q  R  R  C  A  A  P  C  L  N  C  F  L  *  L  L  C  *  C  N  G  A  I  H  E  L  E  F  V  S  *  V  E  F  C  L  G  V  I  H  S  L  G  R  L  L  F  R  W  T  C  K  K  *  L  I  S  Q  K  L  K  V  T  S  R  *  Y  P  T  F  D  F  W  F  I  L  K  L  F  W  P  K  S  </first_frame>
            <second_frame>  *  K  R  L  T  L  P  A  E  I  V  R :   I  *  H  K  G  A  H  D  A  A  S  A  I  F  I  A  G  E  *  V  T  Q  D  L  R  M  C  R  *  Q  V  I  L  Y  I  I  V  Y  L  W  S  L  V  S  E  G  N  A  F  *  I  F  F  A  G  F  Y  L  I  W  I  P  T  Q  Q  E  S  E  L  E  L  V  Q  K  L  F  V  *  *  W  A  L  F  M  L  L  L  Y  H  C  H  H  G  H  C  L  S  N  L  S  Y  K  K  P  C  F  *  Y  S  A  S  K  K  C  K  L  T  L  K  L  H  *  L  N  T  L  *  S  F  N  I  N  L  D  G  V  S  L  I  P  N  K  K  R  I  H  K  E  D  V  Q  L  L  A  *  I  V  F  C  S  C  C  A  S  V  T  E  R  F  T  S  W  S  L  S  V  E  *  N  F  V  L  V  S  F  I  H  W  E  D  Y  C  L  D  G  L  V  K  S  N  L  *  V  K  S  *  K  S  Q  V  D  D  T  L  L  L  T  F  G  L  F  *  N  S  F  G  L  K  V </second_frame>
            <third_frame>   R  S  A  *  H  F  R  R  R  *  S   : A  S  S  I  K  E  P  T  M  Q  L  L  L  S  L  *  L  E  N  K  *  L  R  T  *  E  C  V  D  D  R  S  S  Y  I  L  L  C  I  Y  G  L  S  C  L  K  V  M  L  F  E  F  F  L  L  D  F  I  L  Y  G  F  Q  P  S  K  N  L  N  W  N  W  S  K  N  Y  S  C  S  S  G  P  C  S  C  F  S  Y  I  T  V  T  M  G  T  A  Y  R  I  L  V  T  R  N  L  V  F  D  T  Q  L  V  K  N  A  N  *  H  *  S  Y  I  S  *  T  L  C  N  P  L  T  *  T  *  M  G  *  V  L  S  Q  T  K  R  E  Y  T  K  K  M  C  S  S  L  L  K  L  F  S  V  V  A  V  L  V  *  R  S  D  S  R  A  G  V  C  Q  L  S  R  I  L  S  W  C  H  S  F  T  G  K  I  I  V  *  M  D  L  *  K  V  T  Y  K  S  K  A  K  S  H  K  *  M  I  P  Y  F  *  L  L  V  Y  F  K  T  L  L  A  *  K   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0053H21.1" strand="-"/>
                <serials PGL_serial="17" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="79287" stop="79012"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>273</number_coding_nucleotides>
                  <number_encoded_amino_acids>91</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ECVDDRSSYILLCIYGLSCLKVMLFEFFLLDFILYGFQPSKNLNWNWSKNYSCSSGPCSCFSYITVTMGTAYRILVTRNLVFDTQLVKNAN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="18" PGL_strand="+" PGL_start="85056" PGL_stop="91874"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="85056" e_stop="85399"/>
            <exon e_start="86576" e_stop="86705"/>
            <exon e_start="87265" e_stop="87459"/>
            <exon e_start="88940" e_stop="89097"/>
            <exon e_start="89944" e_stop="90034"/>
            <exon e_start="90221" e_stop="90286"/>
            <exon e_start="90477" e_stop="90559"/>
            <exon e_start="90748" e_stop="90811"/>
            <exon e_start="90947" e_stop="91015"/>
            <exon e_start="91480" e_stop="91874"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.996" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.975" acc_prob="0.273" e_score="1.000"/>
          <exon-intron don_prob="0.989" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.568" acc_prob="0.911" e_score="1.000"/>
          <exon-intron don_prob="0.930" acc_prob="0.941" e_score="1.000"/>
          <exon-intron don_prob="0.987" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.900" acc_prob="0.917" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.992" acc_prob="0.967" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="85056" e_stop="85399" e_length="344"/>
          </exon>
          <intron i_serial="1" don_prob="0.996" acc_prob="0.994">
            <gDNA_intron_boundary i_start="85400" i_stop="86575" i_length="1176"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="86576" e_stop="86705" e_length="130"/>
          </exon>
          <intron i_serial="2" don_prob="0.975" acc_prob="0.273">
            <gDNA_intron_boundary i_start="86706" i_stop="87264" i_length="559"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="87265" e_stop="87459" e_length="195"/>
          </exon>
          <intron i_serial="3" don_prob="0.989" acc_prob="0.992">
            <gDNA_intron_boundary i_start="87460" i_stop="88939" i_length="1480"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="88940" e_stop="89097" e_length="158"/>
          </exon>
          <intron i_serial="4" don_prob="0.568" acc_prob="0.911">
            <gDNA_intron_boundary i_start="89098" i_stop="89943" i_length="846"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="89944" e_stop="90034" e_length="91"/>
          </exon>
          <intron i_serial="5" don_prob="0.930" acc_prob="0.941">
            <gDNA_intron_boundary i_start="90035" i_stop="90220" i_length="186"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="90221" e_stop="90286" e_length="66"/>
          </exon>
          <intron i_serial="6" don_prob="0.987" acc_prob="0.992">
            <gDNA_intron_boundary i_start="90287" i_stop="90476" i_length="190"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="90477" e_stop="90559" e_length="83"/>
          </exon>
          <intron i_serial="7" don_prob="0.900" acc_prob="0.917">
            <gDNA_intron_boundary i_start="90560" i_stop="90747" i_length="188"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="90748" e_stop="90811" e_length="64"/>
          </exon>
          <intron i_serial="8" don_prob="0.995" acc_prob="0.998">
            <gDNA_intron_boundary i_start="90812" i_stop="90946" i_length="135"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="90947" e_stop="91015" e_length="69"/>
          </exon>
          <intron i_serial="9" don_prob="0.992" acc_prob="0.967">
            <gDNA_intron_boundary i_start="91016" i_stop="91479" i_length="464"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="91480" e_stop="91874" e_length="395"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="85056" stop="85399"/>
              <exon start="86576" stop="86705"/>
              <exon start="87265" stop="87459"/>
              <exon start="88940" stop="89097"/>
              <exon start="89944" stop="90034"/>
              <exon start="90221" stop="90286"/>
              <exon start="90477" stop="90559"/>
              <exon start="90748" stop="90811"/>
              <exon start="90947" stop="91015"/>
              <exon start="91480" stop="91874"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U577609" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="85088" stop="85399"/>
              <exon start="86576" stop="86705"/>
              <exon start="87265" stop="87332"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U590772" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="18" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAGATATTTGCCTGTGGAGAGTGAAAAGGGTCCCAATAGCAGCATACAAGAGAGAGCAAAAAGCTTTCCCAATCTATGGCTTTTTCCTAAAAATGGTGTGTGAGTAAAGTAGTGTTATTGCTCTGGCGGTTGCATCAAACAGAAGCGGGGCCCAATTCCTTCGTTGCATCTACCCAGCCTGCGTCTTCTTTGTTGTCCCTTTTCCGAAATCCGATACCTTTATCAATAACTCTTCAGTCTCTGATTTCCGGATAAACCATGTCCAAAGCTCGAGTATACACCGATATCAATGTGCTTCGTCCTAGGGAATATTGGGATTACGAATCGCTAACTGTTCAATGGGG : TGATCAGGATGACTATGAGGTTGTTCGAAAAGTTGGAAGAGGAAAATACAGTGAAGTTTTTGAAGGTATAAATGTTAACAGCAGGGAGAAGTGCATAATCAAGATCCTGAAACCTGTTAAGAAGAAAAAG : ATCAAAAGAGAGATAAAGATATTGCAAAATCTCTGTGGTGGACCAAATATTGTCAAACTCCTTGATATCGTCAGAGATCAGCATTCAAAAACTCCAAGCTTGATTTTTGAGTACGTGAACAGCACAGATTTCAAGGTTTTGTACCCAACGCTAACAGACTATGACATACGGTACTACATATATGAGCTTCTCAAG : GCACTAGATTATTGCCATTCACAGGGAATAATGCACAGGGATGTCAAACCTCATAACGTTATGATAGACCATGAACTGCGGAAGCTTCGCTTGATAGATTGGGGTCTTGCCGAATTTTACCACCCAGGGAAGGAATATAATGTTCGTGTGGCTTCAAG : ATACTTCAAGGGCCCTGAACTTCTAGTTGACTTGCAAGACTATGACTATTCTTTGGACATGTGGAGCCTTGGCTGCATGTTTGCAGGAATG : ATTTTCCGCAAGGAACCTTTCTTTTATGGCCATGATAATCAGGATCAGCTCGTCAAAATTGCAAAG : GTACTTGGGACAGATGAGTTGAATGCGTACTTGCACAAGTATCAACTAGAGCTTGATCCTCAGCTAGAGGCTATGGTTGGGAG : ACACAGTAGGAAGCCGTGGTCCAAATTTATTAATGCAGACAATCAGCATCTAGTGTCACCGGAG : GCTATAGATTATCTTGACAAGCTTCTCCGTTACGATCATCAGACTAGACTTACGGCAAAAGAAGCAATG : GCCCATCCATATTTCGGGCAAGTGAGGGCTGCTGAAACTAGCAGAATGAGGACACAGTAGCTTTCTTGTCTTGCTGTTAATGGGAAGAAAAAAAACTGTGTAATGTACCTTGTGTATCCATTTAAGTGACATTCGTGAGAACTATGTGGATTTGAACTTGAGCAGACATCTGAATTCAGGAATTACAGATCTTCATCATTGAACATTTCAAGAGAAATAGTGTTTTTTAGATTTCCTGATCGTGACCTTGATTGCAAATGGAAGTGACTTGCTGGGCGTCAAAAGTCACCCCACCCCCCCTTCCCCAAAGATACTATCTCCCTAGATGTGAACAAAAGCAGATTTTTGAAAATTAGTTCACTTTGTATATTAGTGCACTGGATTTTTCTGCATTC</gDNA_template>
            <first_frame> K  I  F  A  C  G  E  *  K  G  S  Q  *  Q  H  T  R  E  S  K  K  L  S  Q  S  M  A  F  S  *  K  W  C  V  S  K  V  V  L  L  L  W  R  L  H  Q  T  E  A  G  P  N  S  F  V  A  S  T  Q  P  A  S  S  L  L  S  L  F  R  N  P  I  P  L  S  I  T  L  Q  S  L  I  S  G  *  T  M  S  K  A  R  V  Y  T  D  I  N  V  L  R  P  R  E  Y  W  D  Y  E  S  L  T  V  Q  W  G :   D  Q  D  D  Y  E  V  V  R  K  V  G  R  G  K  Y  S  E  V  F  E  G  I  N  V  N  S  R  E  K  C  I  I  K  I  L  K  P  V  K  K  K  K  :  I  K  R  E  I  K  I  L  Q  N  L  C  G  G  P  N  I  V  K  L  L  D  I  V  R  D  Q  H  S  K  T  P  S  L  I  F  E  Y  V  N  S  T  D  F  K  V  L  Y  P  T  L  T  D  Y  D  I  R  Y  Y  I  Y  E  L  L  K  :  A  L  D  Y  C  H  S  Q  G  I  M  H  R  D  V  K  P  H  N  V  M  I  D  H  E  L  R  K  L  R  L  I  D  W  G  L  A  E  F  Y  H  P  G  K  E  Y  N  V  R  V  A  S  R :   Y  F  K  G  P  E  L  L  V  D  L  Q  D  Y  D  Y  S  L  D  M  W  S  L  G  C  M  F  A  G  M  :  I  F  R  K  E  P  F  F  Y  G  H  D  N  Q  D  Q  L  V  K  I  A  K  :  V  L  G  T  D  E  L  N  A  Y  L  H  K  Y  Q  L  E  L  D  P  Q  L  E  A  M  V  G  R :   H  S  R  K  P  W  S  K  F  I  N  A  D  N  Q  H  L  V  S  P  E  :  A  I  D  Y  L  D  K  L  L  R  Y  D  H  Q  T  R  L  T  A  K  E  A  M  :  A  H  P  Y  F  G  Q  V  R  A  A  E  T  S  R  M  R  T  Q  *  L  S  C  L  A  V  N  G  K  K  K  N  C  V  M  Y  L  V  Y  P  F  K  *  H  S  *  E  L  C  G  F  E  L  E  Q  T  S  E  F  R  N  Y  R  S  S  S  L  N  I  S  R  E  I  V  F  F  R  F  P  D  R  D  L  D  C  K  W  K  *  L  A  G  R  Q  K  S  P  H  P  P  F  P  K  D  T  I  S  L  D  V  N  K  S  R  F  L  K  I  S  S  L  C  I  L  V  H  W  I  F  L  H   </first_frame>
            <second_frame>  R  Y  L  P  V  E  S  E  K  G  P  N  S  S  I  Q  E  R  A  K  S  F  P  N  L  W  L  F  P  K  N  G  V  *  V  K  *  C  Y  C  S  G  G  C  I  K  Q  K  R  G  P  I  P  S  L  H  L  P  S  L  R  L  L  C  C  P  F  S  E  I  R  Y  L  Y  Q  *  L  F  S  L  *  F  P  D  K  P  C  P  K  L  E  Y  T  P  I  S  M  C  F  V  L  G  N  I  G  I  T  N  R  *  L  F  N  G   : V  I  R  M  T  M  R  L  F  E  K  L  E  E  E  N  T  V  K  F  L  K  V  *  M  L  T  A  G  R  S  A  *  S  R  S  *  N  L  L  R  R  K  R :   S  K  E  R  *  R  Y  C  K  I  S  V  V  D  Q  I  L  S  N  S  L  I  S  S  E  I  S  I  Q  K  L  Q  A  *  F  L  S  T  *  T  A  Q  I  S  R  F  C  T  Q  R  *  Q  T  M  T  Y  G  T  T  Y  M  S  F  S  R :   H  *  I  I  A  I  H  R  E  *  C  T  G  M  S  N  L  I  T  L  *  *  T  M  N  C  G  S  F  A  *  *  I  G  V  L  P  N  F  T  T  Q  G  R  N  I  M  F  V  W  L  Q   : D  T  S  R  A  L  N  F  *  L  T  C  K  T  M  T  I  L  W  T  C  G  A  L  A  A  C  L  Q  E  * :   F  S  A  R  N  L  S  F  M  A  M  I  I  R  I  S  S  S  K  L  Q  R :   Y  L  G  Q  M  S  *  M  R  T  C  T  S  I  N  *  S  L  I  L  S  *  R  L  W  L  G   : D  T  V  G  S  R  G  P  N  L  L  M  Q  T  I  S  I  *  C  H  R  R :   L  *  I  I  L  T  S  F  S  V  T  I  I  R  L  D  L  R  Q  K  K  Q  W :   P  I  H  I  S  G  K  *  G  L  L  K  L  A  E  *  G  H  S  S  F  L  V  L  L  L  M  G  R  K  K  T  V  *  C  T  L  C  I  H  L  S  D  I  R  E  N  Y  V  D  L  N  L  S  R  H  L  N  S  G  I  T  D  L  H  H  *  T  F  Q  E  K  *  C  F  L  D  F  L  I  V  T  L  I  A  N  G  S  D  L  L  G  V  K  S  H  P  T  P  P  S  P  K  I  L  S  P  *  M  *  T  K  A  D  F  *  K  L  V  H  F  V  Y  *  C  T  G  F  F  C  I  </second_frame>
            <third_frame>   D  I  C  L  W  R  V  K  R  V  P  I  A  A  Y  K  R  E  Q  K  A  F  P  I  Y  G  F  F  L  K  M  V  C  E  *  S  S  V  I  A  L  A  V  A  S  N  R  S  G  A  Q  F  L  R  C  I  Y  P  A  C  V  F  F  V  V  P  F  P  K  S  D  T  F  I  N  N  S  S  V  S  D  F  R  I  N  H  V  Q  S  S  S  I  H  R  Y  Q  C  A  S  S  *  G  I  L  G  L  R  I  A  N  C  S  M  G  :  *  S  G  *  L  *  G  C  S  K  S  W  K  R  K  I  Q  *  S  F  *  R  Y  K  C  *  Q  Q  G  E  V  H  N  Q  D  P  E  T  C  *  E  E  K   : D  Q  K  R  D  K  D  I  A  K  S  L  W  W  T  K  Y  C  Q  T  P  *  Y  R  Q  R  S  A  F  K  N  S  K  L  D  F  *  V  R  E  Q  H  R  F  Q  G  F  V  P  N  A  N  R  L  *  H  T  V  L  H  I  *  A  S  Q   : G  T  R  L  L  P  F  T  G  N  N  A  Q  G  C  Q  T  S  *  R  Y  D  R  P  *  T  A  E  A  S  L  D  R  L  G  S  C  R  I  L  P  P  R  E  G  I  *  C  S  C  G  F  K  :  I  L  Q  G  P  *  T  S  S  *  L  A  R  L  *  L  F  F  G  H  V  E  P  W  L  H  V  C  R  N   : D  F  P  Q  G  T  F  L  L  W  P  *  *  S  G  S  A  R  Q  N  C  K   : G  T  W  D  R  *  V  E  C  V  L  A  Q  V  S  T  R  A  *  S  S  A  R  G  Y  G  W  E  :  T  Q  *  E  A  V  V  Q  I  Y  *  C  R  Q  S  A  S  S  V  T  G   : G  Y  R  L  S  *  Q  A  S  P  L  R  S  S  D  *  T  Y  G  K  R  S  N   : G  P  S  I  F  R  A  S  E  G  C  *  N  *  Q  N  E  D  T  V  A  F  L  S  C  C  *  W  E  E  K  K  L  C  N  V  P  C  V  S  I  *  V  T  F  V  R  T  M  W  I  *  T  *  A  D  I  *  I  Q  E  L  Q  I  F  I  I  E  H  F  K  R  N  S  V  F  *  I  S  *  S  *  P  *  L  Q  M  E  V  T  C  W  A  S  K  V  T  P  P  P  L  P  Q  R  Y  Y  L  P  R  C  E  Q  K  Q  I  F  E  N  *  F  T  L  Y  I  S  A  L  D  F  S  A  F </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0053H21.1" strand="+"/>
                <serials PGL_serial="18" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="85311" stop="85399"/>
                    <exon start="86576" stop="86705"/>
                    <exon start="87265" stop="87459"/>
                    <exon start="88940" stop="89097"/>
                    <exon start="89944" stop="90034"/>
                    <exon start="90221" stop="90286"/>
                    <exon start="90477" stop="90559"/>
                    <exon start="90748" stop="90811"/>
                    <exon start="90947" stop="91015"/>
                    <exon start="91480" stop="91539"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1002</number_coding_nucleotides>
                  <number_encoded_amino_acids>334</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TMSKARVYTDINVLRPREYWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFEGINVNSREKCIIKILKPVKKKKIKREIKILQNLCGGPNIVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNQDQLVKIAKVLGTDELNAYLHKYQLELDPQLEAMVGRHSRKPWSKFINADNQHLVSPEAIDYLDKLLRYDHQTRLTAKEAMAHPYFGQVRAAETSRMRTQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="19" PGL_strand="-" PGL_start="93615" PGL_stop="92179"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="93615" e_stop="93494"/>
            <exon e_start="93273" e_stop="93233"/>
            <exon e_start="92434" e_stop="92179"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.978" acc_prob="0.989" e_score="0.975"/>
          <exon-intron don_prob="1.000" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.975">
            <gDNA_exon_boundary e_start="93615" e_stop="93494" e_length="122"/>
          </exon>
          <intron i_serial="1" don_prob="0.978" acc_prob="0.989">
            <gDNA_intron_boundary i_start="93493" i_stop="93274" i_length="220"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="93273" e_stop="93233" e_length="41"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="0.999">
            <gDNA_intron_boundary i_start="93232" i_stop="92435" i_length="798"/>
          </intron>
          <exon e_serial="3" e_score="0.996">
            <gDNA_exon_boundary e_start="92434" e_stop="92179" e_length="256"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="93615" stop="93494"/>
              <exon start="93273" stop="93233"/>
              <exon start="92434" stop="92179"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U591619" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="19" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GTAACAGAAGAGCTCTCTAGGGTTTCAATTCACCTCCGTTTCAGCAGTAATGGGTGGAGGCAACGGTCAGAAAGCCAAGATGGCTCGTGAGAAGAACATATAGAAGATGAAAGGCGCAAAAG : AAAGCCAACTTGACGCGAACAAGAAGGCCATGAATATCCAG : TGCAAGGTGTGCATGCAGACATTTATGTGCACAACGTCAGAGGTGAAGTGCAAGGAACATGCCGAGGCCAAACATCCAAAATCTGACCTCGCCACCTGTTTCCCTCATCTCAAAATATAAACTTAGGTGTCGAACATGTCTTGTAGATAATGTTAGTATTACCTCCTATCACTAATCACAAAGTGTCGATCCAAGCAAGATGTAAAATTGTGTATTTGTCCCGCACATAAATAGGTCGGGCCAAATCTTTAGTTGT</gDNA_template>
            <first_frame> V  T  E  E  L  S  R  V  S  I  H  L  R  F  S  S  N  G  W  R  Q  R  S  E  S  Q  D  G  S  *  E  E  H  I  E  D  E  R  R  K  R :   K  P  T  *  R  E  Q  E  G  H  E  Y  P   : V  Q  G  V  H  A  D  I  Y  V  H  N  V  R  G  E  V  Q  G  T  C  R  G  Q  T  S  K  I  *  P  R  H  L  F  P  S  S  Q  N  I  N  L  G  V  E  H  V  L  *  I  M  L  V  L  P  P  I  T  N  H  K  V  S  I  Q  A  R  C  K  I  V  Y  L  S  R  T  *  I  G  R  A  K  S  L  V   </first_frame>
            <second_frame>  *  Q  K  S  S  L  G  F  Q  F  T  S  V  S  A  V  M  G  G  G  N  G  Q  K  A  K  M  A  R  E  K  N  I  *  K  M  K  G  A  K   : E  S  Q  L  D  A  N  K  K  A  M  N  I  Q  :  C  K  V  C  M  Q  T  F  M  C  T  T  S  E  V  K  C  K  E  H  A  E  A  K  H  P  K  S  D  L  A  T  C  F  P  H  L  K  I  *  T  *  V  S  N  M  S  C  R  *  C  *  Y  Y  L  L  S  L  I  T  K  C  R  S  K  Q  D  V  K  L  C  I  C  P  A  H  K  *  V  G  P  N  L  *  L  </second_frame>
            <third_frame>   N  R  R  A  L  *  G  F  N  S  P  P  F  Q  Q  *  W  V  E  A  T  V  R  K  P  R  W  L  V  R  R  T  Y  R  R  *  K  A  Q  K  :  K  A  N  L  T  R  T  R  R  P  *  I  S  S :   A  R  C  A  C  R  H  L  C  A  Q  R  Q  R  *  S  A  R  N  M  P  R  P  N  I  Q  N  L  T  S  P  P  V  S  L  I  S  K  Y  K  L  R  C  R  T  C  L  V  D  N  V  S  I  T  S  Y  H  *  S  Q  S  V  D  P  S  K  M  *  N  C  V  F  V  P  H  I  N  R  S  G  Q  I  F  S  C </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02SLe0053H21.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="92974" e_stop="92421"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="92974" e_stop="92421" e_length="554"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92974" stop="92421"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U603210" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="19" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTCATCTTCGTATGAGTTCATATTTCATAATGACAACCCAATAATGGCAACTCTCAATCATGTGTTCCACTGTGTAGTCTCCTTTAAATGTTCTGTAATTTGGCTCATGTAGCATGTGAATTGTTTAGTCACTCTTCTTACATAGATACTGGCTATGTGGTTCAGTACTCCTATCTTTCTCCTTGTACTTTGAAAATCTGAATTTAGGCAATTCGATTGTTTTTTATGTCTTATTAGATTGTCTTTTGTCTTTCTTTTCCAGCCTTCTACGATATTTCTGTGATGTTGTATAACTTCTGCCAAAAAAAATTTTCTTAGGCTTTCAATAGGAGATAGCCTAAGTAAAGAGTCGCATTCAAGTCTGAACAATAATCTTTATGGCTCTGCTTATCAGTGTCTACACAGATTTTCTTACCGGGTGAACTATTTTTATGTCTTCTTTCAGCCTCTGATAATTCATTAGTGTCTTTAGAGTTCATCTTGATTGATGTTTGTTTTGATCCTTCACTAACTTGTATTTATTGTTGCGGATGATGGCAGTGCAAGGTGTGCAT</gDNA_template>
            <first_frame> F  I  F  V  *  V  H  I  S  *  *  Q  P  N  N  G  N  S  Q  S  C  V  P  L  C  S  L  L  *  M  F  C  N  L  A  H  V  A  C  E  L  F  S  H  S  S  Y  I  D  T  G  Y  V  V  Q  Y  S  Y  L  S  P  C  T  L  K  I  *  I  *  A  I  R  L  F  F  M  S  Y  *  I  V  F  C  L  S  F  P  A  F  Y  D  I  S  V  M  L  Y  N  F  C  Q  K  K  F  S  *  A  F  N  R  R  *  P  K  *  R  V  A  F  K  S  E  Q  *  S  L  W  L  C  L  S  V  S  T  Q  I  F  L  P  G  E  L  F  L  C  L  L  S  A  S  D  N  S  L  V  S  L  E  F  I  L  I  D  V  C  F  D  P  S  L  T  C  I  Y  C  C  G  *  W  Q  C  K  V  C   </first_frame>
            <second_frame>  S  S  S  Y  E  F  I  F  H  N  D  N  P  I  M  A  T  L  N  H  V  F  H  C  V  V  S  F  K  C  S  V  I  W  L  M  *  H  V  N  C  L  V  T  L  L  T  *  I  L  A  M  W  F  S  T  P  I  F  L  L  V  L  *  K  S  E  F  R  Q  F  D  C  F  L  C  L  I  R  L  S  F  V  F  L  F  Q  P  S  T  I  F  L  *  C  C  I  T  S  A  K  K  N  F  L  R  L  S  I  G  D  S  L  S  K  E  S  H  S  S  L  N  N  N  L  Y  G  S  A  Y  Q  C  L  H  R  F  S  Y  R  V  N  Y  F  Y  V  F  F  Q  P  L  I  I  H  *  C  L  *  S  S  S  *  L  M  F  V  L  I  L  H  *  L  V  F  I  V  A  D  D  G  S  A  R  C  A  </second_frame>
            <third_frame>   H  L  R  M  S  S  Y  F  I  M  T  T  Q  *  W  Q  L  S  I  M  C  S  T  V  *  S  P  L  N  V  L  *  F  G  S  C  S  M  *  I  V  *  S  L  F  L  H  R  Y  W  L  C  G  S  V  L  L  S  F  S  L  Y  F  E  N  L  N  L  G  N  S  I  V  F  Y  V  L  L  D  C  L  L  S  F  F  S  S  L  L  R  Y  F  C  D  V  V  *  L  L  P  K  K  I  F  L  G  F  Q  *  E  I  A  *  V  K  S  R  I  Q  V  *  T  I  I  F  M  A  L  L  I  S  V  Y  T  D  F  L  T  G  *  T  I  F  M  S  S  F  S  L  *  *  F  I  S  V  F  R  V  H  L  D  *  C  L  F  *  S  F  T  N  L  Y  L  L  L  R  M  M  A  V  Q  G  V  H </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02SLe0053H21.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="20" PGL_strand="+" PGL_start="92944" PGL_stop="100724"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="92944" e_stop="93655"/>
            <exon e_start="94811" e_stop="95092"/>
            <exon e_start="95927" e_stop="96071"/>
            <exon e_start="96538" e_stop="96706"/>
            <exon e_start="97254" e_stop="97512"/>
            <exon e_start="98393" e_stop="98481"/>
            <exon e_start="99093" e_stop="99292"/>
            <exon e_start="99446" e_stop="99457"/>
            <exon e_start="99602" e_stop="99686"/>
            <exon e_start="100025" e_stop="100724"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.995" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.987" acc_prob="0.988" e_score="1.000"/>
          <exon-intron don_prob="0.955" acc_prob="0.869" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.982" e_score="1.000"/>
          <exon-intron don_prob="0.911" acc_prob="0.990" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.987" acc_prob="0.854" e_score="1.000"/>
          <exon-intron don_prob="0.920" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.997" e_score="1.000"/>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="92944" e_stop="93655" e_length="712"/>
          </exon>
          <intron i_serial="1" don_prob="0.995" acc_prob="0.000">
            <gDNA_intron_boundary i_start="93656" i_stop="94810" i_length="1155"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="94811" e_stop="95092" e_length="282"/>
          </exon>
          <intron i_serial="2" don_prob="0.987" acc_prob="0.988">
            <gDNA_intron_boundary i_start="95093" i_stop="95926" i_length="834"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="95927" e_stop="96071" e_length="145"/>
          </exon>
          <intron i_serial="3" don_prob="0.955" acc_prob="0.869">
            <gDNA_intron_boundary i_start="96072" i_stop="96537" i_length="466"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="96538" e_stop="96706" e_length="169"/>
          </exon>
          <intron i_serial="4" don_prob="0.996" acc_prob="0.982">
            <gDNA_intron_boundary i_start="96707" i_stop="97253" i_length="547"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="97254" e_stop="97512" e_length="259"/>
          </exon>
          <intron i_serial="5" don_prob="0.911" acc_prob="0.990">
            <gDNA_intron_boundary i_start="97513" i_stop="98392" i_length="880"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="98393" e_stop="98481" e_length="89"/>
          </exon>
          <intron i_serial="6" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="98482" i_stop="99092" i_length="611"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="99093" e_stop="99292" e_length="200"/>
          </exon>
          <intron i_serial="7" don_prob="0.987" acc_prob="0.854">
            <gDNA_intron_boundary i_start="99293" i_stop="99445" i_length="153"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="99446" e_stop="99457" e_length="12"/>
          </exon>
          <intron i_serial="8" don_prob="0.920" acc_prob="0.995">
            <gDNA_intron_boundary i_start="99458" i_stop="99601" i_length="144"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="99602" e_stop="99686" e_length="85"/>
          </exon>
          <intron i_serial="9" don_prob="0.994" acc_prob="0.997">
            <gDNA_intron_boundary i_start="99687" i_stop="100024" i_length="338"/>
          </intron>
          <exon e_serial="10" e_score="0.997">
            <gDNA_exon_boundary e_start="100025" e_stop="100724" e_length="700"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92944" stop="93655"/>
              <exon start="94811" stop="95092"/>
              <exon start="95927" stop="96071"/>
              <exon start="96538" stop="96706"/>
              <exon start="97254" stop="97512"/>
              <exon start="98393" stop="98481"/>
              <exon start="99093" stop="99292"/>
              <exon start="99446" stop="99457"/>
              <exon start="99602" stop="99686"/>
              <exon start="100025" stop="100724"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U579715" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="20" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATTATGAAATATGAACTCATACGAAGATGAAGTTCAACACCATGAAGTTACCAGCCCGAAAAATAATAACAAAAGATTATAGATGGTAAGGATATCCAGGTTATTGATTTATTGGAGTGATTGATCGGTTCTCACCTTCAACATATAATGCCCCTCTTCTTGTTACTACTGGACTAATCAATTTCAGCTATCCATAATCAATTTCTCTAGATGAATCCAACAAATATTGGGATTCAGTAATTACCCATTACAATTTACATACCAAAATTGCACAATAAAAAGGCTTTACCTGGATATTCATGGCCTTCTTGTTCGCGTCAAGTTGGCTTTCTGCATATAGATTTTGAGAGTTAGTAAAAAGCCAAAAGATTGACGATTAACGTAAAATCATATCTCAGCATCTAAACAAACAAAAAGAGCGATTAAGGCACTCTCAGCCACGTCGAATTCCAACAACGAGATCGAATCGGCTGATATTAAGGCTAATTGACCATTGAATTAAGAGCATGATGTGGATGAAATTGGGTTCAGATCATTAGAAACAAAATACCTTTTGCGCCTTTCATCTTCTATATGTTCTTCTCACGAGCCATCTTGGCTTTCTGACCGTTGCCTCCACCCATTACTGCTGAAACGGAGGTGAATTGAAACCCTAGAGAGCTCTTCTGTTACAGGCGGTGGCGGGGATACGGCAGCTGCAGGGGATAGAGAG : TTCATTGCGAGGCTCTATTTAGACGCGTTCCACTATTCGCTGGGATGATCTAGTAATTTTGAGATCGGGTGAAATACATTTTCTTAAGAATGGGGGTGATCGTCGAGAGCAATGTTTGGGAGCCAAATCCAGCACTGTGTTTATTCTTCTTCATATCATGTTGCTTGTCAATCTACTATTTGCCAAGCAGCACCAGAAGTTCCGCCATTTTCGATCACGCACCTTCGTCTTCCTTCATTCGTTTCCAGAGAAGTTTCCTTTTACTCTATTCGCTTTCTTCAG : TAATGGAAGGCTTGTTGGCAGTATTTGGAGAGTACGACTTAGCATTCCATGGCATTAGTAGGGAGCAGATGGTCATCTCTCTATGTGTTGGATACGCAACTGCTCTCTTTGTCGGTACCTTTTTGGGAATGCTCTCGGATTTGAT : TGGCCAGAGAAAAGTCAGCTTGTTATTTTGCTTGCTGCATCTTTTTGTTGCCGTATGGAGGAGGGTTACTGGACATCCAACTATTTGGCTCGCTAGCATCTGTCTGTCTCTTACCTCTACAATATTTTTCTTCAACTTCGAGACATGGATGGTTGTTGAGCATGATAAG : CTTGAGCAGAGGCAGGATTCAGTGAATGACATGTTTTGGTTAATGACTTTTGTTGAATCTGCATCTTTCATTGGAAGCCAAGTGGTTGGTAACTGGTTAATTGGTGGTCATGAAAAGACAACTTTGCTTGCTCCGTCCAGTGCAGTGGTAATAATGGCTCTTAGTGCTCTGGCTTATGTCAGCCGAGGATGGAAGGAAGATCCAAAATCAATTATTCTTAAAGAATATCAGACTAAATTTCATACATACATAATCAGTG : ATAAAAGGGTTTGGCTTTTGTCATGGACCCAAGCTACCATGCACTTCTCAATTGCAGTTTTTTGGATTACTTGGGCTCCAACCATTGTG : TTTGTTTGGATTTTTAGGCAGATGGGAGAGGGGTTTTGCTAGGTTTAGTATACCCCTGTGTACTTGGTGCGAAAATGCTTGGAAGCACTGCATTTTCCTGGTTCTCTAGTGGCCCTTTATCACTCCGAACAGAGGAGTGCTTAGTATATGCCTGTATTATTATGGGCTTTGTCACTTCCATTGTAGCTTTTGATTATCAG : ATTGAGAACCAT : GTATGTGCCTAATGATCTTCGTGGAGGAATGATGAGTTTATCTATCGCTCCTTCGAACGCGCTTATGTTGTTCCTTTTGATTCAG : AGAGGTTTTTACCAGAATATTGAAAATTCAACAATTATAGCTATGGCGGCTCTTGGTCTTTTTTCTGCAGCTGGATGCATGTATATGTTAAAGCGGCTTGGAAAGCAACCACACCAGAACTGGCACAAATTATGACCCCTTCCATTTGTTTTAAACTTTTGTATCCATGTGGGTGTATCCTGTATATAGCCGGCCAGTTAGTTTAAAGATAAAGGAACAGTAGCCTTGGAACATGATGATGGGTGCAAATTAAGTAGCATGCTCTGCAAATATGGAAAATCAATAAAGAGCTGTAGCCAGTTTCAATGTTCAGTTATTCTCACGTTGCTTAACCAATCAGGTCCAGTGGGAGATCTCACTATGGAGTTCAATTTTGCTTTCGAGACACTTTGCAGATTGATGCCCTGAAAAGGCTAAATTAATACTTTGCTTCTAGTAAGTATTGTGGAGAAGTGTTATACCAGAGGAGTAACAGAATACATGGTGGCTTAGTTTGCATGATTTTAACAGCTCTTCAGAATTGTGATGGTCCACGGAAAGTCTTGTTTCATATTCAGAGATCACCAAAGAGTAAGAGAAATTTCTCTTCTTTCTTATCATGTTTTCTTTAAACCGGCAGACATGATCTCTATATCATGGTGATTTTTCCTTTAATTATTTGGTTGGATTGCAGATATTATAATTTGAAGAAAGATTACGT</gDNA_template>
            <first_frame> I  M  K  Y  E  L  I  R  R  *  S  S  T  P  *  S  Y  Q  P  E  K  *  *  Q  K  I  I  D  G  K  D  I  Q  V  I  D  L  L  E  *  L  I  G  S  H  L  Q  H  I  M  P  L  F  L  L  L  L  D  *  S  I  S  A  I  H  N  Q  F  L  *  M  N  P  T  N  I  G  I  Q  *  L  P  I  T  I  Y  I  P  K  L  H  N  K  K  A  L  P  G  Y  S  W  P  S  C  S  R  Q  V  G  F  L  H  I  D  F  E  S  *  *  K  A  K  R  L  T  I  N  V  K  S  Y  L  S  I  *  T  N  K  K  S  D  *  G  T  L  S  H  V  E  F  Q  Q  R  D  R  I  G  *  Y  *  G  *  L  T  I  E  L  R  A  *  C  G  *  N  W  V  Q  I  I  R  N  K  I  P  F  A  P  F  I  F  Y  M  F  F  S  R  A  I  L  A  F  *  P  L  P  P  P  I  T  A  E  T  E  V  N  *  N  P  R  E  L  F  C  Y  R  R  W  R  G  Y  G  S  C  R  G  *  R   : V  H  C  E  A  L  F  R  R  V  P  L  F  A  G  M  I  *  *  F  *  D  R  V  K  Y  I  F  L  R  M  G  V  I  V  E  S  N  V  W  E  P  N  P  A  L  C  L  F  F  F  I  S  C  C  L  S  I  Y  Y  L  P  S  S  T  R  S  S  A  I  F  D  H  A  P  S  S  S  F  I  R  F  Q  R  S  F  L  L  L  Y  S  L  S  S   : V  M  E  G  L  L  A  V  F  G  E  Y  D  L  A  F  H  G  I  S  R  E  Q  M  V  I  S  L  C  V  G  Y  A  T  A  L  F  V  G  T  F  L  G  M  L  S  D  L  I :   G  Q  R  K  V  S  L  L  F  C  L  L  H  L  F  V  A  V  W  R  R  V  T  G  H  P  T  I  W  L  A  S  I  C  L  S  L  T  S  T  I  F  F  F  N  F  E  T  W  M  V  V  E  H  D  K  :  L  E  Q  R  Q  D  S  V  N  D  M  F  W  L  M  T  F  V  E  S  A  S  F  I  G  S  Q  V  V  G  N  W  L  I  G  G  H  E  K  T  T  L  L  A  P  S  S  A  V  V  I  M  A  L  S  A  L  A  Y  V  S  R  G  W  K  E  D  P  K  S  I  I  L  K  E  Y  Q  T  K  F  H  T  Y  I  I  S   : D  K  R  V  W  L  L  S  W  T  Q  A  T  M  H  F  S  I  A  V  F  W  I  T  W  A  P  T  I  V  :  F  V  W  I  F  R  Q  M  G  E  G  F  C  *  V  *  Y  T  P  V  Y  L  V  R  K  C  L  E  A  L  H  F  P  G  S  L  V  A  L  Y  H  S  E  Q  R  S  A  *  Y  M  P  V  L  L  W  A  L  S  L  P  L  *  L  L  I  I  R :   L  R  T  M :   Y  V  P  N  D  L  R  G  G  M  M  S  L  S  I  A  P  S  N  A  L  M  L  F  L  L  I  Q  :  R  G  F  Y  Q  N  I  E  N  S  T  I  I  A  M  A  A  L  G  L  F  S  A  A  G  C  M  Y  M  L  K  R  L  G  K  Q  P  H  Q  N  W  H  K  L  *  P  L  P  F  V  L  N  F  C  I  H  V  G  V  S  C  I  *  P  A  S  *  F  K  D  K  G  T  V  A  L  E  H  D  D  G  C  K  L  S  S  M  L  C  K  Y  G  K  S  I  K  S  C  S  Q  F  Q  C  S  V  I  L  T  L  L  N  Q  S  G  P  V  G  D  L  T  M  E  F  N  F  A  F  E  T  L  C  R  L  M  P  *  K  G  *  I  N  T  L  L  L  V  S  I  V  E  K  C  Y  T  R  G  V  T  E  Y  M  V  A  *  F  A  *  F  *  Q  L  F  R  I  V  M  V  H  G  K  S  C  F  I  F  R  D  H  Q  R  V  R  E  I  S  L  L  S  Y  H  V  F  F  K  P  A  D  M  I  S  I  S  W  *  F  F  L  *  L  F  G  W  I  A  D  I  I  I  *  R  K  I  T  </first_frame>
            <second_frame>  L  *  N  M  N  S  Y  E  D  E  V  Q  H  H  E  V  T  S  P  K  N  N  N  K  R  L  *  M  V  R  I  S  R  L  L  I  Y  W  S  D  *  S  V  L  T  F  N  I  *  C  P  S  S  C  Y  Y  W  T  N  Q  F  Q  L  S  I  I  N  F  S  R  *  I  Q  Q  I  L  G  F  S  N  Y  P  L  Q  F  T  Y  Q  N  C  T  I  K  R  L  Y  L  D  I  H  G  L  L  V  R  V  K  L  A  F  C  I  *  I  L  R  V  S  K  K  P  K  D  *  R  L  T  *  N  H  I  S  A  S  K  Q  T  K  R  A  I  K  A  L  S  A  T  S  N  S  N  N  E  I  E  S  A  D  I  K  A  N  *  P  L  N  *  E  H  D  V  D  E  I  G  F  R  S  L  E  T  K  Y  L  L  R  L  S  S  S  I  C  S  S  H  E  P  S  W  L  S  D  R  C  L  H  P  L  L  L  K  R  R  *  I  E  T  L  E  S  S  S  V  T  G  G  G  G  D  T  A  A  A  G  D  R  E  :  F  I  A  R  L  Y  L  D  A  F  H  Y  S  L  G  *  S  S  N  F  E  I  G  *  N  T  F  S  *  E  W  G  *  S  S  R  A  M  F  G  S  Q  I  Q  H  C  V  Y  S  S  S  Y  H  V  A  C  Q  S  T  I  C  Q  A  A  P  E  V  P  P  F  S  I  T  H  L  R  L  P  S  F  V  S  R  E  V  S  F  Y  S  I  R  F  L  Q  :  *  W  K  A  C  W  Q  Y  L  E  S  T  T  *  H  S  M  A  L  V  G  S  R  W  S  S  L  Y  V  L  D  T  Q  L  L  S  L  S  V  P  F  W  E  C  S  R  I  *   : L  A  R  E  K  S  A  C  Y  F  A  C  C  I  F  L  L  P  Y  G  G  G  L  L  D  I  Q  L  F  G  S  L  A  S  V  C  L  L  P  L  Q  Y  F  S  S  T  S  R  H  G  W  L  L  S  M  I  S :   L  S  R  G  R  I  Q  *  M  T  C  F  G  *  *  L  L  L  N  L  H  L  S  L  E  A  K  W  L  V  T  G  *  L  V  V  M  K  R  Q  L  C  L  L  R  P  V  Q  W  *  *  W  L  L  V  L  W  L  M  S  A  E  D  G  R  K  I  Q  N  Q  L  F  L  K  N  I  R  L  N  F  I  H  T  *  S  V  :  I  K  G  F  G  F  C  H  G  P  K  L  P  C  T  S  Q  L  Q  F  F  G  L  L  G  L  Q  P  L  C :   L  F  G  F  L  G  R  W  E  R  G  F  A  R  F  S  I  P  L  C  T  W  C  E  N  A  W  K  H  C  I  F  L  V  L  *  W  P  F  I  T  P  N  R  G  V  L  S  I  C  L  Y  Y  Y  G  L  C  H  F  H  C  S  F  *  L  S   : D  *  E  P   : C  M  C  L  M  I  F  V  E  E  *  *  V  Y  L  S  L  L  R  T  R  L  C  C  S  F  *  F  R :   E  V  F  T  R  I  L  K  I  Q  Q  L  *  L  W  R  L  L  V  F  F  L  Q  L  D  A  C  I  C  *  S  G  L  E  S  N  H  T  R  T  G  T  N  Y  D  P  F  H  L  F  *  T  F  V  S  M  W  V  Y  P  V  Y  S  R  P  V  S  L  K  I  K  E  Q  *  P  W  N  M  M  M  G  A  N  *  V  A  C  S  A  N  M  E  N  Q  *  R  A  V  A  S  F  N  V  Q  L  F  S  R  C  L  T  N  Q  V  Q  W  E  I  S  L  W  S  S  I  L  L  S  R  H  F  A  D  *  C  P  E  K  A  K  L  I  L  C  F  *  *  V  L  W  R  S  V  I  P  E  E  *  Q  N  T  W  W  L  S  L  H  D  F  N  S  S  S  E  L  *  W  S  T  E  S  L  V  S  Y  S  E  I  T  K  E  *  E  K  F  L  F  F  L  I  M  F  S  L  N  R  Q  T  *  S  L  Y  H  G  D  F  S  F  N  Y  L  V  G  L  Q  I  L  *  F  E  E  R  L  R </second_frame>
            <third_frame>   Y  E  I  *  T  H  T  K  M  K  F  N  T  M  K  L  P  A  R  K  I  I  T  K  D  Y  R  W  *  G  Y  P  G  Y  *  F  I  G  V  I  D  R  F  S  P  S  T  Y  N  A  P  L  L  V  T  T  G  L  I  N  F  S  Y  P  *  S  I  S  L  D  E  S  N  K  Y  W  D  S  V  I  T  H  Y  N  L  H  T  K  I  A  Q  *  K  G  F  T  W  I  F  M  A  F  L  F  A  S  S  W  L  S  A  Y  R  F  *  E  L  V  K  S  Q  K  I  D  D  *  R  K  I  I  S  Q  H  L  N  K  Q  K  E  R  L  R  H  S  Q  P  R  R  I  P  T  T  R  S  N  R  L  I  L  R  L  I  D  H  *  I  K  S  M  M  W  M  K  L  G  S  D  H  *  K  Q  N  T  F  C  A  F  H  L  L  Y  V  L  L  T  S  H  L  G  F  L  T  V  A  S  T  H  Y  C  *  N  G  G  E  L  K  P  *  R  A  L  L  L  Q  A  V  A  G  I  R  Q  L  Q  G  I  E  S :   S  L  R  G  S  I  *  T  R  S  T  I  R  W  D  D  L  V  I  L  R  S  G  E  I  H  F  L  K  N  G  G  D  R  R  E  Q  C  L  G  A  K  S  S  T  V  F  I  L  L  H  I  M  L  L  V  N  L  L  F  A  K  Q  H  Q  K  F  R  H  F  R  S  R  T  F  V  F  L  H  S  F  P  E  K  F  P  F  T  L  F  A  F  F  S :   N  G  R  L  V  G  S  I  W  R  V  R  L  S  I  P  W  H  *  *  G  A  D  G  H  L  S  M  C  W  I  R  N  C  S  L  C  R  Y  L  F  G  N  A  L  G  F  D  :  W  P  E  K  S  Q  L  V  I  L  L  A  A  S  F  C  C  R  M  E  E  G  Y  W  T  S  N  Y  L  A  R  *  H  L  S  V  S  Y  L  Y  N  I  F  L  Q  L  R  D  M  D  G  C  *  A  *  *   : A  *  A  E  A  G  F  S  E  *  H  V  L  V  N  D  F  C  *  I  C  I  F  H  W  K  P  S  G  W  *  L  V  N  W  W  S  *  K  D  N  F  A  C  S  V  Q  C  S  G  N  N  G  S  *  C  S  G  L  C  Q  P  R  M  E  G  R  S  K  I  N  Y  S  *  R  I  S  D  *  I  S  Y  I  H  N  Q  * :   *  K  G  L  A  F  V  M  D  P  S  Y  H  A  L  L  N  C  S  F  L  D  Y  L  G  S  N  H  C   : V  C  L  D  F  *  A  D  G  R  G  V  L  L  G  L  V  Y  P  C  V  L  G  A  K  M  L  G  S  T  A  F  S  W  F  S  S  G  P  L  S  L  R  T  E  E  C  L  V  Y  A  C  I  I  M  G  F  V  T  S  I  V  A  F  D  Y  Q  :  I  E  N  H  :  V  C  A  *  *  S  S  W  R  N  D  E  F  I  Y  R  S  F  E  R  A  Y  V  V  P  F  D  S   : E  R  F  L  P  E  Y  *  K  F  N  N  Y  S  Y  G  G  S  W  S  F  F  C  S  W  M  H  V  Y  V  K  A  A  W  K  A  T  T  P  E  L  A  Q  I  M  T  P  S  I  C  F  K  L  L  Y  P  C  G  C  I  L  Y  I  A  G  Q  L  V  *  R  *  R  N  S  S  L  G  T  *  *  W  V  Q  I  K  *  H  A  L  Q  I  W  K  I  N  K  E  L  *  P  V  S  M  F  S  Y  S  H  V  A  *  P  I  R  S  S  G  R  S  H  Y  G  V  Q  F  C  F  R  D  T  L  Q  I  D  A  L  K  R  L  N  *  Y  F  A  S  S  K  Y  C  G  E  V  L  Y  Q  R  S  N  R  I  H  G  G  L  V  C  M  I  L  T  A  L  Q  N  C  D  G  P  R  K  V  L  F  H  I  Q  R  S  P  K  S  K  R  N  F  S  S  F  L  S  C  F  L  *  T  G  R  H  D  L  Y  I  M  V  I  F  P  L  I  I  W  L  D  C  R  Y  Y  N  L  K  K  D  Y   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0053H21.1" strand="+"/>
                <serials PGL_serial="20" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="94873" stop="95092"/>
                    <exon start="95927" stop="96071"/>
                    <exon start="96538" stop="96706"/>
                    <exon start="97254" stop="97512"/>
                    <exon start="98393" stop="98481"/>
                    <exon start="99093" stop="99134"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>921</number_coding_nucleotides>
                  <number_encoded_amino_acids>307</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DRVKYIFLRMGVIVESNVWEPNPALCLFFFISCCLSIYYLPSSTRSSAIFDHAPSSSFIRFQRSFLLLYSLSSVMEGLLAVFGEYDLAFHGISREQMVISLCVGYATALFVGTFLGMLSDLIGQRKVSLLFCLLHLFVAVWRRVTGHPTIWLASICLSLTSTIFFFNFETWMVVEHDKLEQRQDSVNDMFWLMTFVESASFIGSQVVGNWLIGGHEKTTLLAPSSAVVIMALSALAYVSRGWKEDPKSIILKEYQTKFHTYIISDKRVWLLSWTQATMHFSIAVFWITWAPTIVFVWIFRQMGEGFC*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0053H21.1" strand="+"/>
                <serials PGL_serial="20" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="99279" stop="99292"/>
                    <exon start="99446" stop="99457"/>
                    <exon start="99602" stop="99686"/>
                    <exon start="100025" stop="100159"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>243</number_coding_nucleotides>
                  <number_encoded_amino_acids>81</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LLIIRLRTMYVPNDLRGGMMSLSIAPSNALMLFLLIQRGFYQNIENSTIIAMAALGLFSAAGCMYMLKRLGKQPHQNWHKL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0053H21.1" strand="+"/>
                <serials PGL_serial="20" AGS_serial="1" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="100226" stop="100432"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>204</number_coding_nucleotides>
                  <number_encoded_amino_acids>68</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FKDKGTVALEHDDGCKLSSMLCKYGKSIKSCSQFQCSVILTLLNQSGPVGDLTMEFNFAFETLCRLMP*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="96012" e_stop="96071"/>
            <exon e_start="96538" e_stop="96706"/>
            <exon e_start="97254" e_stop="97512"/>
            <exon e_start="98393" e_stop="98481"/>
            <exon e_start="99110" e_stop="99292"/>
            <exon e_start="99372" e_stop="99420"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.955" acc_prob="0.869" e_score="0.950"/>
          <exon-intron don_prob="0.996" acc_prob="0.982" e_score="0.982"/>
          <exon-intron don_prob="0.911" acc_prob="0.990" e_score="0.969"/>
          <exon-intron don_prob="0.000" acc_prob="0.987" e_score="1.000"/>
          <exon-intron don_prob="0.987" acc_prob="0.982" e_score="0.934"/>
          <exon-only e_score="0.959"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.950">
            <gDNA_exon_boundary e_start="96012" e_stop="96071" e_length="60"/>
          </exon>
          <intron i_serial="1" don_prob="0.955" acc_prob="0.869">
            <gDNA_intron_boundary i_start="96072" i_stop="96537" i_length="466"/>
          </intron>
          <exon e_serial="2" e_score="0.982">
            <gDNA_exon_boundary e_start="96538" e_stop="96706" e_length="169"/>
          </exon>
          <intron i_serial="2" don_prob="0.996" acc_prob="0.982">
            <gDNA_intron_boundary i_start="96707" i_stop="97253" i_length="547"/>
          </intron>
          <exon e_serial="3" e_score="0.969">
            <gDNA_exon_boundary e_start="97254" e_stop="97512" e_length="259"/>
          </exon>
          <intron i_serial="3" don_prob="0.911" acc_prob="0.990">
            <gDNA_intron_boundary i_start="97513" i_stop="98392" i_length="880"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="98393" e_stop="98481" e_length="89"/>
          </exon>
          <intron i_serial="4" don_prob="0.000" acc_prob="0.987">
            <gDNA_intron_boundary i_start="98482" i_stop="99109" i_length="628"/>
          </intron>
          <exon e_serial="5" e_score="0.934">
            <gDNA_exon_boundary e_start="99110" e_stop="99292" e_length="183"/>
          </exon>
          <intron i_serial="5" don_prob="0.987" acc_prob="0.982">
            <gDNA_intron_boundary i_start="99293" i_stop="99371" i_length="79"/>
          </intron>
          <exon e_serial="6" e_score="0.959">
            <gDNA_exon_boundary e_start="99372" e_stop="99420" e_length="49"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="96012" stop="96071"/>
              <exon start="96538" stop="96706"/>
              <exon start="97254" stop="97512"/>
              <exon start="98393" stop="98481"/>
              <exon start="99110" stop="99292"/>
              <exon start="99372" stop="99420"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U591745" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="20" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGTTGGATACGCAACTGCTCTCTTTGTCGGTACCTTTTTGGGAATGCTCTCGGATTTGAT : TGGCCAGAGAAAAGTCAGCTTGTTATTTTGCTTGCTGCATCTTTTTGTTGCCGTATGGAGGAGGGTTACTGGACATCCAACTATTTGGCTCGCTAGCATCTGTCTGTCTCTTACCTCTACAATATTTTTCTTCAACTTCGAGACATGGATGGTTGTTGAGCATGATAAG : CTTGAGCAGAGGCAGGATTCAGTGAATGACATGTTTTGGTTAATGACTTTTGTTGAATCTGCATCTTTCATTGGAAGCCAAGTGGTTGGTAACTGGTTAATTGGTGGTCATGAAAAGACAACTTTGCTTGCTCCGTCCAGTGCAGTGGTAATAATGGCTCTTAGTGCTCTGGCTTATGTCAGCCGAGGATGGAAGGAAGATCCAAAATCAATTATTCTTAAAGAATATCAGACTAAATTTCATACATACATAATCAGTG : ATAAAAGGGTTTGGCTTTTGTCATGGACCCAAGCTACCATGCACTTCTCAATTGCAGTTTTTTGGATTACTTGGGCTCCAACCATTGTG : GCAGATGGGAGAGGGGTTTTGCTAGGTTTAGTATACCCCTGTGTACTTGGTGCGAAAATGCTTGGAAGCACTGCATTTTCCTGGTTCTCTAGTGGCCCTTTATCACTCCGAACAGAGGAGTGCTTAGTATATGCCTGTATTATTATGGGCTTTGTCACTTCCATTGTAGCTTTTGATTATCAG : GATGTTGAAATTCTTTTGATGCTATTCTGCATATTTCATGCTTGTGTGG</gDNA_template>
            <first_frame> C  W  I  R  N  C  S  L  C  R  Y  L  F  G  N  A  L  G  F  D  :  W  P  E  K  S  Q  L  V  I  L  L  A  A  S  F  C  C  R  M  E  E  G  Y  W  T  S  N  Y  L  A  R  *  H  L  S  V  S  Y  L  Y  N  I  F  L  Q  L  R  D  M  D  G  C  *  A  *  *   : A  *  A  E  A  G  F  S  E  *  H  V  L  V  N  D  F  C  *  I  C  I  F  H  W  K  P  S  G  W  *  L  V  N  W  W  S  *  K  D  N  F  A  C  S  V  Q  C  S  G  N  N  G  S  *  C  S  G  L  C  Q  P  R  M  E  G  R  S  K  I  N  Y  S  *  R  I  S  D  *  I  S  Y  I  H  N  Q  * :   *  K  G  L  A  F  V  M  D  P  S  Y  H  A  L  L  N  C  S  F  L  D  Y  L  G  S  N  H  C   : G  R  W  E  R  G  F  A  R  F  S  I  P  L  C  T  W  C  E  N  A  W  K  H  C  I  F  L  V  L  *  W  P  F  I  T  P  N  R  G  V  L  S  I  C  L  Y  Y  Y  G  L  C  H  F  H  C  S  F  *  L  S   : G  C  *  N  S  F  D  A  I  L  H  I  S  C  L  C   </first_frame>
            <second_frame>  V  G  Y  A  T  A  L  F  V  G  T  F  L  G  M  L  S  D  L  I :   G  Q  R  K  V  S  L  L  F  C  L  L  H  L  F  V  A  V  W  R  R  V  T  G  H  P  T  I  W  L  A  S  I  C  L  S  L  T  S  T  I  F  F  F  N  F  E  T  W  M  V  V  E  H  D  K  :  L  E  Q  R  Q  D  S  V  N  D  M  F  W  L  M  T  F  V  E  S  A  S  F  I  G  S  Q  V  V  G  N  W  L  I  G  G  H  E  K  T  T  L  L  A  P  S  S  A  V  V  I  M  A  L  S  A  L  A  Y  V  S  R  G  W  K  E  D  P  K  S  I  I  L  K  E  Y  Q  T  K  F  H  T  Y  I  I  S   : D  K  R  V  W  L  L  S  W  T  Q  A  T  M  H  F  S  I  A  V  F  W  I  T  W  A  P  T  I  V  :  A  D  G  R  G  V  L  L  G  L  V  Y  P  C  V  L  G  A  K  M  L  G  S  T  A  F  S  W  F  S  S  G  P  L  S  L  R  T  E  E  C  L  V  Y  A  C  I  I  M  G  F  V  T  S  I  V  A  F  D  Y  Q  :  D  V  E  I  L  L  M  L  F  C  I  F  H  A  C  V  </second_frame>
            <third_frame>   L  D  T  Q  L  L  S  L  S  V  P  F  W  E  C  S  R  I  *   : L  A  R  E  K  S  A  C  Y  F  A  C  C  I  F  L  L  P  Y  G  G  G  L  L  D  I  Q  L  F  G  S  L  A  S  V  C  L  L  P  L  Q  Y  F  S  S  T  S  R  H  G  W  L  L  S  M  I  S :   L  S  R  G  R  I  Q  *  M  T  C  F  G  *  *  L  L  L  N  L  H  L  S  L  E  A  K  W  L  V  T  G  *  L  V  V  M  K  R  Q  L  C  L  L  R  P  V  Q  W  *  *  W  L  L  V  L  W  L  M  S  A  E  D  G  R  K  I  Q  N  Q  L  F  L  K  N  I  R  L  N  F  I  H  T  *  S  V  :  I  K  G  F  G  F  C  H  G  P  K  L  P  C  T  S  Q  L  Q  F  F  G  L  L  G  L  Q  P  L  W :   Q  M  G  E  G  F  C  *  V  *  Y  T  P  V  Y  L  V  R  K  C  L  E  A  L  H  F  P  G  S  L  V  A  L  Y  H  S  E  Q  R  S  A  *  Y  M  P  V  L  L  W  A  L  S  L  P  L  *  L  L  I  I  R :   M  L  K  F  F  *  C  Y  S  A  Y  F  M  L  V  W </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0053H21.1" strand="+"/>
                <serials PGL_serial="20" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="96013" stop="96071"/>
                    <exon start="96538" stop="96706"/>
                    <exon start="97254" stop="97512"/>
                    <exon start="98393" stop="98481"/>
                    <exon start="99110" stop="99292"/>
                    <exon start="99372" stop="99419"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>807</number_coding_nucleotides>
                  <number_encoded_amino_acids>269</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VGYATALFVGTFLGMLSDLIGQRKVSLLFCLLHLFVAVWRRVTGHPTIWLASICLSLTSTIFFFNFETWMVVEHDKLEQRQDSVNDMFWLMTFVESASFIGSQVVGNWLIGGHEKTTLLAPSSAVVIMALSALAYVSRGWKEDPKSIILKEYQTKFHTYIISDKRVWLLSWTQATMHFSIAVFWITWAPTIVADGRGVLLGLVYPCVLGAKMLGSTAFSWFSSGPLSLRTEECLVYACIIMGFVTSIVAFDYQDVEILLMLFCIFHACV</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="21" PGL_strand="-" PGL_start="105974" PGL_stop="103284"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="105974" e_stop="103284"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="105974" e_stop="103284" e_length="2691"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="105974" stop="103284"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U568348" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="21" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CATACGTTAAGAAATGTGATCCTTCTTTTTTTACTCTTTAATCTTTATTTTATCACTTGGTCTGCTAGGCTGGCTGTTTCCAATCATTCATAAAAAGAAAACAACATCAACATCTAGCCCCACTCTTTTAATTTTCCTATATATATTACCTTAAGTTTCTCATTGCTTGTTCATCCACTCCCTCTTATTAATGCAGCAGTCCAAGCGAAAAATTAATCAAAAATGTCTACATACACACTACTAGTTGTTGTACTTGTGTGCCTATGTCACATGTCTGTGGCAATGGTGGAGAAGAAAACATACATCATTCACATGGCTAAATCACAAATGCCAGCAATATTTGATGATCATACTCACTGGTATGACGCGTCCCTCAAATCCGTCTCTGAATCAGCAGAGATGATCTATGTTTATAAAAACGTTGTTCATGGTTTTGCAGCAAGGCTTACAGCTCGACAAGCTGAATCCTTAGAGACCCAACCTGGGATTCTCTCTGTTTTGCCTGAGCTGATATACCAACTCCACACTACTCGGACACCTCTTTTTTTGGGACTTGATAGAAGTGTTAATATCTTTCCTGAGTCCGATGCTATGAGTGATGTCATTGTCGGAGTACTCGATACAGGGGTTTGGCCGGAGAGAAAGAGCTTTGACGATACTGGATTTGGACCTGTACCAGATTCGTGGAAAGGTGAGTGTGAGTCCAGCAACAACTTCAGTTCTGCCATGTGTAACAGAAAGCTTGTTGGAGCGAGGTATTTTTCTAGGGGTTATGAAACTACTCTTGGACCAATTGATGAGTCCAAGGAGTCTAAATCTCCTAGGGATGATGATGGACATGGAACACACACTGCTTCGACAGCAGCTGGTTCAGTTGTTCAGGGTGCTAGCCTTTTTGGTTATGCTTCAGGAACTGCTCGTGGAATGGCCTATCGTGCCAGAGTTGCCATGTACAAAGTTTGCTGGCTTGGGGGATGTTTTAACTCTGACATATTGGCAGGGATGGACAAAGCCATTGATGATAAAGTTGATGTGCTTTCATTATCACTTGGTGGAAGCACACCAGATTACTACAAAGATAGCATTGCAATTGGAGCTTTTGCTGCTATGGAGAAGGGTATTTTGGTTTCTTGCTCTGCTGGAAATGCTGGACCTAATCAATTCAGTTTGGCCAACCAAGCACCTTGGATCACCACAGTCGGTGCTGGAACAATTGACCGTGATTTTCCAGCATATGTAAGCCTTGGCAATGGTAAAAATTTCTCCGGCGTTTCACTTTACGCGGGTGATTCATTACTTAATAAAATGCTTCCCTTGGTGTATGCTGGTAATGCCAGCAATGTAACCAGTGGAAATCTCTGTATGATGGGTACCTTAATTCCTGAGAAAGTTAAAGGAAAAATTGTGCTGTGTGACAGAGGGATTAGCGCTCGAGTCCAAAAGGGTTTTGTGGTAAAAGAGGCTGGTGGAGCCGGCATGGTTTTGGCTAACACCGCAGCAAATGGGGAGGAACTAGTGGCTGACGCCCATTTACTTCCAGCGGCGGCGGTGGGTCAAAAAGCCGGTGATGTAATCAAGAAATATTTATTCTCAGATCCTAATCCAACGGCCGAAATTCTTTTTGGAGGAACAAAAGTAGACATCGAACCGTCACCGGTTGTCGCAGCGTTCAGTTCTAGAGGCCCAAATTCAATCACCCCGGAGATACTCAAACCGGATATTATCGCGCCCGGTGTAAACATTCTGGCCGGTTGGACCGGAGCCGTCGGCCCGACGGGGATGGCAGAGGACGATAGACGGGTCGAGTTCAACATTATCTCAGGCACATCCATGTCGTGTCCACACGTGAGCGGCTTGGCGGCTTTGATAAAAGGAGTCCACCCAGAATGGAGCCCCGCCGCCATTCGTTCGGCGCTCATGACCTCCGCTTACACCGTCTACAAGAACGGCGGAGCACTAGTAGATGTCGCCACCGGAAAACCATCTACACCTTTCGACCACGGCGCTGGACACGTGGATCCCGTTTCGGCAGTGAACCCAGGTCTTGTTTACGACATAAACGCCGATGATTACCTCAATTTCATGTGTGCATTGAAATACACTCCATCACAAATCAACAGCTTAGCGAGAAGAAACTTCACGTGTGATTCAAGCAAAACATACAGCGTCACAGATTTGAATTACCCTTCATTTGCTGTTTCATTCGTTGCCGGGAGTGACGGTTCAAACACAATCAAGTACAGCCGGACATTGACTAATGTTGGACCGGCTGGAACATACAAAGTTACAGTTTCTTCCCCAAATAGTTCAGTGAAAATTATAGTTGAGCCTGAAACATTGAGTTTCACTCAGATTAATGAGAAGAAATCGTATACAGTGAGTTTTACTGCTCCATCAAAGTCCTCAGCTACGGATGTATTCGGTAGAATTGAGTGGTCAGATGGGAAGCATGTGGTTAGTAGTCCAGTTGCAATTTCTTGGTCATGAATAATATGAAGACATAGCTATAGCTTCTGTTAATTTTATGTATAAGTTGATGTTTTTCTGCTTTTAAGTTTCATTCCAGCACAAAAGTTTGTAGCTGGTCTCAAGATTTTTTTATGGATAACATGAAAGAATCAAAGAAATGTATGCCTTATACAATATCTTGCTCACTGTACGGTATTTTAAGCAATTCTAATTGTGAACTGT</gDNA_template>
            <first_frame> H  T  L  R  N  V  I  L  L  F  L  L  F  N  L  Y  F  I  T  W  S  A  R  L  A  V  S  N  H  S  *  K  E  N  N  I  N  I  *  P  H  S  F  N  F  P  I  Y  I  T  L  S  F  S  L  L  V  H  P  L  P  L  I  N  A  A  V  Q  A  K  N  *  S  K  M  S  T  Y  T  L  L  V  V  V  L  V  C  L  C  H  M  S  V  A  M  V  E  K  K  T  Y  I  I  H  M  A  K  S  Q  M  P  A  I  F  D  D  H  T  H  W  Y  D  A  S  L  K  S  V  S  E  S  A  E  M  I  Y  V  Y  K  N  V  V  H  G  F  A  A  R  L  T  A  R  Q  A  E  S  L  E  T  Q  P  G  I  L  S  V  L  P  E  L  I  Y  Q  L  H  T  T  R  T  P  L  F  L  G  L  D  R  S  V  N  I  F  P  E  S  D  A  M  S  D  V  I  V  G  V  L  D  T  G  V  W  P  E  R  K  S  F  D  D  T  G  F  G  P  V  P  D  S  W  K  G  E  C  E  S  S  N  N  F  S  S  A  M  C  N  R  K  L  V  G  A  R  Y  F  S  R  G  Y  E  T  T  L  G  P  I  D  E  S  K  E  S  K  S  P  R  D  D  D  G  H  G  T  H  T  A  S  T  A  A  G  S  V  V  Q  G  A  S  L  F  G  Y  A  S  G  T  A  R  G  M  A  Y  R  A  R  V  A  M  Y  K  V  C  W  L  G  G  C  F  N  S  D  I  L  A  G  M  D  K  A  I  D  D  K  V  D  V  L  S  L  S  L  G  G  S  T  P  D  Y  Y  K  D  S  I  A  I  G  A  F  A  A  M  E  K  G  I  L  V  S  C  S  A  G  N  A  G  P  N  Q  F  S  L  A  N  Q  A  P  W  I  T  T  V  G  A  G  T  I  D  R  D  F  P  A  Y  V  S  L  G  N  G  K  N  F  S  G  V  S  L  Y  A  G  D  S  L  L  N  K  M  L  P  L  V  Y  A  G  N  A  S  N  V  T  S  G  N  L  C  M  M  G  T  L  I  P  E  K  V  K  G  K  I  V  L  C  D  R  G  I  S  A  R  V  Q  K  G  F  V  V  K  E  A  G  G  A  G  M  V  L  A  N  T  A  A  N  G  E  E  L  V  A  D  A  H  L  L  P  A  A  A  V  G  Q  K  A  G  D  V  I  K  K  Y  L  F  S  D  P  N  P  T  A  E  I  L  F  G  G  T  K  V  D  I  E  P  S  P  V  V  A  A  F  S  S  R  G  P  N  S  I  T  P  E  I  L  K  P  D  I  I  A  P  G  V  N  I  L  A  G  W  T  G  A  V  G  P  T  G  M  A  E  D  D  R  R  V  E  F  N  I  I  S  G  T  S  M  S  C  P  H  V  S  G  L  A  A  L  I  K  G  V  H  P  E  W  S  P  A  A  I  R  S  A  L  M  T  S  A  Y  T  V  Y  K  N  G  G  A  L  V  D  V  A  T  G  K  P  S  T  P  F  D  H  G  A  G  H  V  D  P  V  S  A  V  N  P  G  L  V  Y  D  I  N  A  D  D  Y  L  N  F  M  C  A  L  K  Y  T  P  S  Q  I  N  S  L  A  R  R  N  F  T  C  D  S  S  K  T  Y  S  V  T  D  L  N  Y  P  S  F  A  V  S  F  V  A  G  S  D  G  S  N  T  I  K  Y  S  R  T  L  T  N  V  G  P  A  G  T  Y  K  V  T  V  S  S  P  N  S  S  V  K  I  I  V  E  P  E  T  L  S  F  T  Q  I  N  E  K  K  S  Y  T  V  S  F  T  A  P  S  K  S  S  A  T  D  V  F  G  R  I  E  W  S  D  G  K  H  V  V  S  S  P  V  A  I  S  W  S  *  I  I  *  R  H  S  Y  S  F  C  *  F  Y  V  *  V  D  V  F  L  L  L  S  F  I  P  A  Q  K  F  V  A  G  L  K  I  F  L  W  I  T  *  K  N  Q  R  N  V  C  L  I  Q  Y  L  A  H  C  T  V  F  *  A  I  L  I  V  N  C </first_frame>
            <second_frame>  I  R  *  E  M  *  S  F  F  F  Y  S  L  I  F  I  L  S  L  G  L  L  G  W  L  F  P  I  I  H  K  K  K  T  T  S  T  S  S  P  T  L  L  I  F  L  Y  I  L  P  *  V  S  H  C  L  F  I  H  S  L  L  L  M  Q  Q  S  K  R  K  I  N  Q  K  C  L  H  T  H  Y  *  L  L  Y  L  C  A  Y  V  T  C  L  W  Q  W  W  R  R  K  H  T  S  F  T  W  L  N  H  K  C  Q  Q  Y  L  M  I  I  L  T  G  M  T  R  P  S  N  P  S  L  N  Q  Q  R  *  S  M  F  I  K  T  L  F  M  V  L  Q  Q  G  L  Q  L  D  K  L  N  P  *  R  P  N  L  G  F  S  L  F  C  L  S  *  Y  T  N  S  T  L  L  G  H  L  F  F  W  D  L  I  E  V  L  I  S  F  L  S  P  M  L  *  V  M  S  L  S  E  Y  S  I  Q  G  F  G  R  R  E  R  A  L  T  I  L  D  L  D  L  Y  Q  I  R  G  K  V  S  V  S  P  A  T  T  S  V  L  P  C  V  T  E  S  L  L  E  R  G  I  F  L  G  V  M  K  L  L  L  D  Q  L  M  S  P  R  S  L  N  L  L  G  M  M  M  D  M  E  H  T  L  L  R  Q  Q  L  V  Q  L  F  R  V  L  A  F  L  V  M  L  Q  E  L  L  V  E  W  P  I  V  P  E  L  P  C  T  K  F  A  G  L  G  D  V  L  T  L  T  Y  W  Q  G  W  T  K  P  L  M  I  K  L  M  C  F  H  Y  H  L  V  E  A  H  Q  I  T  T  K  I  A  L  Q  L  E  L  L  L  L  W  R  R  V  F  W  F  L  A  L  L  E  M  L  D  L  I  N  S  V  W  P  T  K  H  L  G  S  P  Q  S  V  L  E  Q  L  T  V  I  F  Q  H  M  *  A  L  A  M  V  K  I  S  P  A  F  H  F  T  R  V  I  H  Y  L  I  K  C  F  P  W  C  M  L  V  M  P  A  M  *  P  V  E  I  S  V  *  W  V  P  *  F  L  R  K  L  K  E  K  L  C  C  V  T  E  G  L  A  L  E  S  K  R  V  L  W  *  K  R  L  V  E  P  A  W  F  W  L  T  P  Q  Q  M  G  R  N  *  W  L  T  P  I  Y  F  Q  R  R  R  W  V  K  K  P  V  M  *  S  R  N  I  Y  S  Q  I  L  I  Q  R  P  K  F  F  L  E  E  Q  K  *  T  S  N  R  H  R  L  S  Q  R  S  V  L  E  A  Q  I  Q  S  P  R  R  Y  S  N  R  I  L  S  R  P  V  *  T  F  W  P  V  G  P  E  P  S  A  R  R  G  W  Q  R  T  I  D  G  S  S  S  T  L  S  Q  A  H  P  C  R  V  H  T  *  A  A  W  R  L  *  *  K  E  S  T  Q  N  G  A  P  P  P  F  V  R  R  S  *  P  P  L  T  P  S  T  R  T  A  E  H  *  *  M  S  P  P  E  N  H  L  H  L  S  T  T  A  L  D  T  W  I  P  F  R  Q  *  T  Q  V  L  F  T  T  *  T  P  M  I  T  S  I  S  C  V  H  *  N  T  L  H  H  K  S  T  A  *  R  E  E  T  S  R  V  I  Q  A  K  H  T  A  S  Q  I  *  I  T  L  H  L  L  F  H  S  L  P  G  V  T  V  Q  T  Q  S  S  T  A  G  H  *  L  M  L  D  R  L  E  H  T  K  L  Q  F  L  P  Q  I  V  Q  *  K  L  *  L  S  L  K  H  *  V  S  L  R  L  M  R  R  N  R  I  Q  *  V  L  L  L  H  Q  S  P  Q  L  R  M  Y  S  V  E  L  S  G  Q  M  G  S  M  W  L  V  V  Q  L  Q  F  L  G  H  E  *  Y  E  D  I  A  I  A  S  V  N  F  M  Y  K  L  M  F  F  C  F  *  V  S  F  Q  H  K  S  L  *  L  V  S  R  F  F  Y  G  *  H  E  R  I  K  E  M  Y  A  L  Y  N  I  L  L  T  V  R  Y  F  K  Q  F  *  L  *  T   </second_frame>
            <third_frame>   Y  V  K  K  C  D  P  S  F  F  T  L  *  S  L  F  Y  H  L  V  C  *  A  G  C  F  Q  S  F  I  K  R  K  Q  H  Q  H  L  A  P  L  F  *  F  S  Y  I  Y  Y  L  K  F  L  I  A  C  S  S  T  P  S  Y  *  C  S  S  P  S  E  K  L  I  K  N  V  Y  I  H  T  T  S  C  C  T  C  V  P  M  S  H  V  C  G  N  G  G  E  E  N  I  H  H  S  H  G  *  I  T  N  A  S  N  I  *  *  S  Y  S  L  V  *  R  V  P  Q  I  R  L  *  I  S  R  D  D  L  C  L  *  K  R  C  S  W  F  C  S  K  A  Y  S  S  T  S  *  I  L  R  D  P  T  W  D  S  L  C  F  A  *  A  D  I  P  T  P  H  Y  S  D  T  S  F  F  G  T  *  *  K  C  *  Y  L  S  *  V  R  C  Y  E  *  C  H  C  R  S  T  R  Y  R  G  L  A  G  E  K  E  L  *  R  Y  W  I  W  T  C  T  R  F  V  E  R  *  V  *  V  Q  Q  Q  L  Q  F  C  H  V  *  Q  K  A  C  W  S  E  V  F  F  *  G  L  *  N  Y  S  W  T  N  *  *  V  Q  G  V  *  I  S  *  G  *  *  W  T  W  N  T  H  C  F  D  S  S  W  F  S  C  S  G  C  *  P  F  W  L  C  F  R  N  C  S  W  N  G  L  S  C  Q  S  C  H  V  Q  S  L  L  A  W  G  M  F  *  L  *  H  I  G  R  D  G  Q  S  H  *  *  *  S  *  C  A  F  I  I  T  W  W  K  H  T  R  L  L  Q  R  *  H  C  N  W  S  F  C  C  Y  G  E  G  Y  F  G  F  L  L  C  W  K  C  W  T  *  S  I  Q  F  G  Q  P  S  T  L  D  H  H  S  R  C  W  N  N  *  P  *  F  S  S  I  C  K  P  W  Q  W  *  K  F  L  R  R  F  T  L  R  G  *  F  I  T  *  *  N  A  S  L  G  V  C  W  *  C  Q  Q  C  N  Q  W  K  S  L  Y  D  G  Y  L  N  S  *  E  S  *  R  K  N  C  A  V  *  Q  R  D  *  R  S  S  P  K  G  F  C  G  K  R  G  W  W  S  R  H  G  F  G  *  H  R  S  K  W  G  G  T  S  G  *  R  P  F  T  S  S  G  G  G  G  S  K  S  R  *  C  N  Q  E  I  F  I  L  R  S  *  S  N  G  R  N  S  F  W  R  N  K  S  R  H  R  T  V  T  G  C  R  S  V  Q  F  *  R  P  K  F  N  H  P  G  D  T  Q  T  G  Y  Y  R  A  R  C  K  H  S  G  R  L  D  R  S  R  R  P  D  G  D  G  R  G  R  *  T  G  R  V  Q  H  Y  L  R  H  I  H  V  V  S  T  R  E  R  L  G  G  F  D  K  R  S  P  P  R  M  E  P  R  R  H  S  F  G  A  H  D  L  R  L  H  R  L  Q  E  R  R  S  T  S  R  C  R  H  R  K  T  I  Y  T  F  R  P  R  R  W  T  R  G  S  R  F  G  S  E  P  R  S  C  L  R  H  K  R  R  *  L  P  Q  F  H  V  C  I  E  I  H  S  I  T  N  Q  Q  L  S  E  K  K  L  H  V  *  F  K  Q  N  I  Q  R  H  R  F  E  L  P  F  I  C  C  F  I  R  C  R  E  *  R  F  K  H  N  Q  V  Q  P  D  I  D  *  C  W  T  G  W  N  I  Q  S  Y  S  F  F  P  K  *  F  S  E  N  Y  S  *  A  *  N  I  E  F  H  S  D  *  *  E  E  I  V  Y  S  E  F  Y  C  S  I  K  V  L  S  Y  G  C  I  R  *  N  *  V  V  R  W  E  A  C  G  *  *  S  S  C  N  F  L  V  M  N  N  M  K  T  *  L  *  L  L  L  I  L  C  I  S  *  C  F  S  A  F  K  F  H  S  S  T  K  V  C  S  W  S  Q  D  F  F  M  D  N  M  K  E  S  K  K  C  M  P  Y  T  I  S  C  S  L  Y  G  I  L  S  N  S  N  C  E  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0053H21.1" strand="-"/>
                <serials PGL_serial="21" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="105758" stop="103488"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>2268</number_coding_nucleotides>
                  <number_encoded_amino_acids>756</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SKMSTYTLLVVVLVCLCHMSVAMVEKKTYIIHMAKSQMPAIFDDHTHWYDASLKSVSESAEMIYVYKNVVHGFAARLTARQAESLETQPGILSVLPELIYQLHTTRTPLFLGLDRSVNIFPESDAMSDVIVGVLDTGVWPERKSFDDTGFGPVPDSWKGECESSNNFSSAMCNRKLVGARYFSRGYETTLGPIDESKESKSPRDDDGHGTHTASTAAGSVVQGASLFGYASGTARGMAYRARVAMYKVCWLGGCFNSDILAGMDKAIDDKVDVLSLSLGGSTPDYYKDSIAIGAFAAMEKGILVSCSAGNAGPNQFSLANQAPWITTVGAGTIDRDFPAYVSLGNGKNFSGVSLYAGDSLLNKMLPLVYAGNASNVTSGNLCMMGTLIPEKVKGKIVLCDRGISARVQKGFVVKEAGGAGMVLANTAANGEELVADAHLLPAAAVGQKAGDVIKKYLFSDPNPTAEILFGGTKVDIEPSPVVAAFSSRGPNSITPEILKPDIIAPGVNILAGWTGAVGPTGMAEDDRRVEFNIISGTSMSCPHVSGLAALIKGVHPEWSPAAIRSALMTSAYTVYKNGGALVDVATGKPSTPFDHGAGHVDPVSAVNPGLVYDINADDYLNFMCALKYTPSQINSLARRNFTCDSSKTYSVTDLNYPSFAVSFVAGSDGSNTIKYSRTLTNVGPAGTYKVTVSSPNSSVKIIVEPETLSFTQINEKKSYTVSFTAPSKSSATDVFGRIEWSDGKHVVSSPVAISWS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="22" PGL_strand="-" PGL_start="106484" PGL_stop="106101"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="106484" e_stop="106101"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.992"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.992">
            <gDNA_exon_boundary e_start="106484" e_stop="106101" e_length="384"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="106484" stop="106101"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U599729" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="22" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ACACTAAAAGCTACTCCATTTCTGTATGGACCCGTGAACCACTATTGTTCATAATGGTAAAGATTTATTTCTCCTTTTATCTTTATTATTATAGTTATTGGAAGTTGGAAATCGTCAAGCCTCTTCATGAAATCTACAGCATTTATTAATCGAAGTGTCCTTCAGCAATGAATTTCCCTACCAACTGAAATCTGTAAAAAAAAATAAAAAATCTACGGAATACTTTGCTCCATATCCTCATTGCGAAACTATGATTGAGAATAAAAGAGTACTCACCATCTTTGCGGATGGCCATTAATGTAGGTAAAAAGAAAATGAAATTTGGATGGCAACTTGAAGAATTTTGCGATTCTGTTTTTTTTTTCTTTTTTGTAGCTTTTCTTG</gDNA_template>
            <first_frame> T  L  K  A  T  P  F  L  Y  G  P  V  N  H  Y  C  S  *  W  *  R  F  I  S  P  F  I  F  I  I  I  V  I  G  S  W  K  S  S  S  L  F  M  K  S  T  A  F  I  N  R  S  V  L  Q  Q  *  I  S  L  P  T  E  I  C  K  K  K  *  K  I  Y  G  I  L  C  S  I  S  S  L  R  N  Y  D  *  E  *  K  S  T  H  H  L  C  G  W  P  L  M  *  V  K  R  K  *  N  L  D  G  N  L  K  N  F  A  I  L  F  F  F  S  F  L  *  L  F  L </first_frame>
            <second_frame>  H  *  K  L  L  H  F  C  M  D  P  *  T  T  I  V  H  N  G  K  D  L  F  L  L  L  S  L  L  L  *  L  L  E  V  G  N  R  Q  A  S  S  *  N  L  Q  H  L  L  I  E  V  S  F  S  N  E  F  P  Y  Q  L  K  S  V  K  K  N  K  K  S  T  E  Y  F  A  P  Y  P  H  C  E  T  M  I  E  N  K  R  V  L  T  I  F  A  D  G  H  *  C  R  *  K  E  N  E  I  W  M  A  T  *  R  I  L  R  F  C  F  F  F  L  F  C  S  F  S   </second_frame>
            <third_frame>   T  K  S  Y  S  I  S  V  W  T  R  E  P  L  L  F  I  M  V  K  I  Y  F  S  F  Y  L  Y  Y  Y  S  Y  W  K  L  E  I  V  K  P  L  H  E  I  Y  S  I  Y  *  S  K  C  P  S  A  M  N  F  P  T  N  *  N  L  *  K  K  I  K  N  L  R  N  T  L  L  H  I  L  I  A  K  L  *  L  R  I  K  E  Y  S  P  S  L  R  M  A  I  N  V  G  K  K  K  M  K  F  G  W  Q  L  E  E  F  C  D  S  V  F  F  F  F  F  V  A  F  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02SLe0053H21.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="23" PGL_strand="-" PGL_start="110981" PGL_stop="109296"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="110981" e_stop="109296"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.994"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.994">
            <gDNA_exon_boundary e_start="110981" e_stop="109296" e_length="1686"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="110981" stop="109296"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U568349" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="23" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGCCTTTTTGGTTATGCTTCAGGAACTGCTCGTGGAATGGCTTATCGTGCCAGAGTTGCCGTCTACAAGGTTTGCTGGCTTGGGAAATGCTTTGGCCCCGACATATTGGCAGGTATGGACAAAGCCATTGATGATAATGTTAATGTGCTTTCATTATCACTTGGTGGAGAGCATTTTGATTTCTACAGCGACGATGTTGCAATTGGAGCATTTGCTGCAATGGAGAAGGGTATTATGGTTTCTTGCTCTGCTGGAAATGCTGGACCCAATCAATTCAGTTTGGCTAACCAAGCACCTTGGATCACCACCGTGGGTGCCGGAACAGTTGACCGTGATTTTCCAGCATATGTAAGCCTTGGCAATGGTAAAAATTTCTCCGGTGTTTCACTTTACGCGGGTGATCCATTACCCAGTGGGATGCTTCCCTTGGTGTATGCAGGTAATGCCAGCAATGCAACCAATGGAAATCTCTGTATAATGGGAACCTTAATTCCTGAGAAAGTTAAAGGCAAAATTGTGCTGTGTGACGGAGGGGTTAACGTCAGAGCTGAAAAGGGTTATGTGGTAAAATCAGCCGGTGGAGCCGGCATGATTTTTGCTAACACAAATGGGCTGGGGCTACTGGCTGACGCCCATTTACTTCCAGCGGCGGCTGTGGGTCAATTAGATGGCGATGAAATCAAGAAGTATATAACATCAGATCCTAATCCAACGGCCACGATTCTTTTTGGAGGAACAATGGTAGGAGTCCAACCAGCACCGATTCTTGCAGCGTTCAGTTCCAGAGGCCCAAATTCCATCACGCCGGAGATACTTAAGCCGGATATCATCGCGCCAGGTGTCAATATTCTGGCCGGTTGGAGCGGTGCAGTCGGTCCTACGGGGTTGCCTGAGGACGATAGACGGGTCGAGTTCAACATTATCTCAGGCACATCCATGTCGTGTCCACACGTGAGTGGCTTAGCGGCTTTGCTCAAAGGAGTCCACCCAGAATGGAGCCCCGCCGCCATTCGTTCGGCGCTCATGACCACCGCTTACACCACCTACAGGAACGGCGGAGCACTACTAGACGTAGCTACCGGAAAACCATCTACACCTTTCGGTCACGGCGCTGGGCACGTGGATCCCGTTTCAGCGGTGAACCCAGGTCTTGTTTACGACATAAACGCCGATGATTACCTCAATTTCCTGTGTGCATTGAAATACAGTCCATCACAAATCAATATCATAGCAAGAAGAAACTTCACATGTGATTCAAGCAAAATATACAGCGTCACAGATTTGAATTACCCTTCGTTTTCAGTTGCATTCCCTGCCGATACCGGTTCAAACACAATCAGATACAGCCGGACACTGACTAATGTTGGACCGTCTGGAACATACAAAGTTGCTGTTACTTTGCCCGATAGTTCCGTGGAAATTATAGTTGAACCTGAAACAGTTAGTTTTACTCAGATTAATGAGAAGATATCGTATAGTGTGAGTTTTACTGCTCCATCAAAGCCCCCATCTACCAATGTATTCGGCAAAATTGAGTGGTCAGATGGGACGCATTTGGTCACTAGTCCAGTTGCAATTTCTTGGTCATGAATTATATGAACAAATTAAAGAGCTATATATAGCTGCTATCGATTTAATGTAAAGTTAATCAAAGAAATTTATGCTTCTTGCTCACAGTGCAGTGAT</gDNA_template>
            <first_frame> S  L  F  G  Y  A  S  G  T  A  R  G  M  A  Y  R  A  R  V  A  V  Y  K  V  C  W  L  G  K  C  F  G  P  D  I  L  A  G  M  D  K  A  I  D  D  N  V  N  V  L  S  L  S  L  G  G  E  H  F  D  F  Y  S  D  D  V  A  I  G  A  F  A  A  M  E  K  G  I  M  V  S  C  S  A  G  N  A  G  P  N  Q  F  S  L  A  N  Q  A  P  W  I  T  T  V  G  A  G  T  V  D  R  D  F  P  A  Y  V  S  L  G  N  G  K  N  F  S  G  V  S  L  Y  A  G  D  P  L  P  S  G  M  L  P  L  V  Y  A  G  N  A  S  N  A  T  N  G  N  L  C  I  M  G  T  L  I  P  E  K  V  K  G  K  I  V  L  C  D  G  G  V  N  V  R  A  E  K  G  Y  V  V  K  S  A  G  G  A  G  M  I  F  A  N  T  N  G  L  G  L  L  A  D  A  H  L  L  P  A  A  A  V  G  Q  L  D  G  D  E  I  K  K  Y  I  T  S  D  P  N  P  T  A  T  I  L  F  G  G  T  M  V  G  V  Q  P  A  P  I  L  A  A  F  S  S  R  G  P  N  S  I  T  P  E  I  L  K  P  D  I  I  A  P  G  V  N  I  L  A  G  W  S  G  A  V  G  P  T  G  L  P  E  D  D  R  R  V  E  F  N  I  I  S  G  T  S  M  S  C  P  H  V  S  G  L  A  A  L  L  K  G  V  H  P  E  W  S  P  A  A  I  R  S  A  L  M  T  T  A  Y  T  T  Y  R  N  G  G  A  L  L  D  V  A  T  G  K  P  S  T  P  F  G  H  G  A  G  H  V  D  P  V  S  A  V  N  P  G  L  V  Y  D  I  N  A  D  D  Y  L  N  F  L  C  A  L  K  Y  S  P  S  Q  I  N  I  I  A  R  R  N  F  T  C  D  S  S  K  I  Y  S  V  T  D  L  N  Y  P  S  F  S  V  A  F  P  A  D  T  G  S  N  T  I  R  Y  S  R  T  L  T  N  V  G  P  S  G  T  Y  K  V  A  V  T  L  P  D  S  S  V  E  I  I  V  E  P  E  T  V  S  F  T  Q  I  N  E  K  I  S  Y  S  V  S  F  T  A  P  S  K  P  P  S  T  N  V  F  G  K  I  E  W  S  D  G  T  H  L  V  T  S  P  V  A  I  S  W  S  *  I  I  *  T  N  *  R  A  I  Y  S  C  Y  R  F  N  V  K  L  I  K  E  I  Y  A  S  C  S  Q  C  S  D </first_frame>
            <second_frame>  A  F  L  V  M  L  Q  E  L  L  V  E  W  L  I  V  P  E  L  P  S  T  R  F  A  G  L  G  N  A  L  A  P  T  Y  W  Q  V  W  T  K  P  L  M  I  M  L  M  C  F  H  Y  H  L  V  E  S  I  L  I  S  T  A  T  M  L  Q  L  E  H  L  L  Q  W  R  R  V  L  W  F  L  A  L  L  E  M  L  D  P  I  N  S  V  W  L  T  K  H  L  G  S  P  P  W  V  P  E  Q  L  T  V  I  F  Q  H  M  *  A  L  A  M  V  K  I  S  P  V  F  H  F  T  R  V  I  H  Y  P  V  G  C  F  P  W  C  M  Q  V  M  P  A  M  Q  P  M  E  I  S  V  *  W  E  P  *  F  L  R  K  L  K  A  K  L  C  C  V  T  E  G  L  T  S  E  L  K  R  V  M  W  *  N  Q  P  V  E  P  A  *  F  L  L  T  Q  M  G  W  G  Y  W  L  T  P  I  Y  F  Q  R  R  L  W  V  N  *  M  A  M  K  S  R  S  I  *  H  Q  I  L  I  Q  R  P  R  F  F  L  E  E  Q  W  *  E  S  N  Q  H  R  F  L  Q  R  S  V  P  E  A  Q  I  P  S  R  R  R  Y  L  S  R  I  S  S  R  Q  V  S  I  F  W  P  V  G  A  V  Q  S  V  L  R  G  C  L  R  T  I  D  G  S  S  S  T  L  S  Q  A  H  P  C  R  V  H  T  *  V  A  *  R  L  C  S  K  E  S  T  Q  N  G  A  P  P  P  F  V  R  R  S  *  P  P  L  T  P  P  T  G  T  A  E  H  Y  *  T  *  L  P  E  N  H  L  H  L  S  V  T  A  L  G  T  W  I  P  F  Q  R  *  T  Q  V  L  F  T  T  *  T  P  M  I  T  S  I  S  C  V  H  *  N  T  V  H  H  K  S  I  S  *  Q  E  E  T  S  H  V  I  Q  A  K  Y  T  A  S  Q  I  *  I  T  L  R  F  Q  L  H  S  L  P  I  P  V  Q  T  Q  S  D  T  A  G  H  *  L  M  L  D  R  L  E  H  T  K  L  L  L  L  C  P  I  V  P  W  K  L  *  L  N  L  K  Q  L  V  L  L  R  L  M  R  R  Y  R  I  V  *  V  L  L  L  H  Q  S  P  H  L  P  M  Y  S  A  K  L  S  G  Q  M  G  R  I  W  S  L  V  Q  L  Q  F  L  G  H  E  L  Y  E  Q  I  K  E  L  Y  I  A  A  I  D  L  M  *  S  *  S  K  K  F  M  L  L  A  H  S  A  V   </second_frame>
            <third_frame>   P  F  W  L  C  F  R  N  C  S  W  N  G  L  S  C  Q  S  C  R  L  Q  G  L  L  A  W  E  M  L  W  P  R  H  I  G  R  Y  G  Q  S  H  *  *  *  C  *  C  A  F  I  I  T  W  W  R  A  F  *  F  L  Q  R  R  C  C  N  W  S  I  C  C  N  G  E  G  Y  Y  G  F  L  L  C  W  K  C  W  T  Q  S  I  Q  F  G  *  P  S  T  L  D  H  H  R  G  C  R  N  S  *  P  *  F  S  S  I  C  K  P  W  Q  W  *  K  F  L  R  C  F  T  L  R  G  *  S  I  T  Q  W  D  A  S  L  G  V  C  R  *  C  Q  Q  C  N  Q  W  K  S  L  Y  N  G  N  L  N  S  *  E  S  *  R  Q  N  C  A  V  *  R  R  G  *  R  Q  S  *  K  G  L  C  G  K  I  S  R  W  S  R  H  D  F  C  *  H  K  W  A  G  A  T  G  *  R  P  F  T  S  S  G  G  C  G  S  I  R  W  R  *  N  Q  E  V  Y  N  I  R  S  *  S  N  G  H  D  S  F  W  R  N  N  G  R  S  P  T  S  T  D  S  C  S  V  Q  F  Q  R  P  K  F  H  H  A  G  D  T  *  A  G  Y  H  R  A  R  C  Q  Y  S  G  R  L  E  R  C  S  R  S  Y  G  V  A  *  G  R  *  T  G  R  V  Q  H  Y  L  R  H  I  H  V  V  S  T  R  E  W  L  S  G  F  A  Q  R  S  P  P  R  M  E  P  R  R  H  S  F  G  A  H  D  H  R  L  H  H  L  Q  E  R  R  S  T  T  R  R  S  Y  R  K  T  I  Y  T  F  R  S  R  R  W  A  R  G  S  R  F  S  G  E  P  R  S  C  L  R  H  K  R  R  *  L  P  Q  F  P  V  C  I  E  I  Q  S  I  T  N  Q  Y  H  S  K  K  K  L  H  M  *  F  K  Q  N  I  Q  R  H  R  F  E  L  P  F  V  F  S  C  I  P  C  R  Y  R  F  K  H  N  Q  I  Q  P  D  T  D  *  C  W  T  V  W  N  I  Q  S  C  C  Y  F  A  R  *  F  R  G  N  Y  S  *  T  *  N  S  *  F  Y  S  D  *  *  E  D  I  V  *  C  E  F  Y  C  S  I  K  A  P  I  Y  Q  C  I  R  Q  N  *  V  V  R  W  D  A  F  G  H  *  S  S  C  N  F  L  V  M  N  Y  M  N  K  L  K  S  Y  I  *  L  L  S  I  *  C  K  V  N  Q  R  N  L  C  F  L  L  T  V  Q  *  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0053H21.1" strand="-"/>
                <serials PGL_serial="23" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="110981" stop="109392"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1587</number_coding_nucleotides>
                  <number_encoded_amino_acids>529</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SLFGYASGTARGMAYRARVAVYKVCWLGKCFGPDILAGMDKAIDDNVNVLSLSLGGEHFDFYSDDVAIGAFAAMEKGIMVSCSAGNAGPNQFSLANQAPWITTVGAGTVDRDFPAYVSLGNGKNFSGVSLYAGDPLPSGMLPLVYAGNASNATNGNLCIMGTLIPEKVKGKIVLCDGGVNVRAEKGYVVKSAGGAGMIFANTNGLGLLADAHLLPAAAVGQLDGDEIKKYITSDPNPTATILFGGTMVGVQPAPILAAFSSRGPNSITPEILKPDIIAPGVNILAGWSGAVGPTGLPEDDRRVEFNIISGTSMSCPHVSGLAALLKGVHPEWSPAAIRSALMTTAYTTYRNGGALLDVATGKPSTPFGHGAGHVDPVSAVNPGLVYDINADDYLNFLCALKYSPSQINIIARRNFTCDSSKIYSVTDLNYPSFSVAFPADTGSNTIRYSRTLTNVGPSGTYKVAVTLPDSSVEIIVEPETVSFTQINEKISYSVSFTAPSKPPSTNVFGKIEWSDGTHLVTSPVAISWS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="24" PGL_strand="-" PGL_start="113426" PGL_stop="112942"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="113426" e_stop="112942"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.973"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.973">
            <gDNA_exon_boundary e_start="113426" e_stop="112942" e_length="485"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="113426" stop="112942"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U599920" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="24" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATATAACAAACATGATAAGATAATTTGCAAAATATTCCCAAATGGAGCCTTGTACAAAATCTTCAAGGTAACTACAATCAATAGGACATATAAAGAGAAAACTGTCGATACATATTTTCTTGCATGTATCCTACAAAGAAAGAAAGAAAATATCCAAAAAGCTTTTTTTTTCGGCCAAAGTGTTCAAAATCCGTATTGGAGCTTCGATCGAATTTGAATTGCGCTTTGTAAGATCCATTCGAGGTGATGCTCCCAACAAAATTTTCTTTCATACTTGAGCTCGAACATAAAATCTCTAGTTAAGGATGAAACACTATGCACCACAACTTAATATACAAAAAAGAAAAAAAAATTACGCATACATTTGGTAGTTGGTTTACTAACTAATATCATTATATATCTATATAATTCTTGCCATCATTCGGATTAAGCTTCTTTTTGCCTGTTAACGAACTCTAACCAAAAAACCAAACTTGAAAGTTGTG</gDNA_template>
            <first_frame> I  *  Q  T  *  *  D  N  L  Q  N  I  P  K  W  S  L  V  Q  N  L  Q  G  N  Y  N  Q  *  D  I  *  R  E  N  C  R  Y  I  F  S  C  M  Y  P  T  K  K  E  R  K  Y  P  K  S  F  F  F  R  P  K  C  S  K  S  V  L  E  L  R  S  N  L  N  C  A  L  *  D  P  F  E  V  M  L  P  T  K  F  S  F  I  L  E  L  E  H  K  I  S  S  *  G  *  N  T  M  H  H  N  L  I  Y  K  K  E  K  K  I  T  H  T  F  G  S  W  F  T  N  *  Y  H  Y  I  S  I  *  F  L  P  S  F  G  L  S  F  F  L  P  V  N  E  L  *  P  K  N  Q  T  *  K  L   </first_frame>
            <second_frame>  Y  N  K  H  D  K  I  I  C  K  I  F  P  N  G  A  L  Y  K  I  F  K  V  T  T  I  N  R  T  Y  K  E  K  T  V  D  T  Y  F  L  A  C  I  L  Q  R  K  K  E  N  I  Q  K  A  F  F  F  G  Q  S  V  Q  N  P  Y  W  S  F  D  R  I  *  I  A  L  C  K  I  H  S  R  *  C  S  Q  Q  N  F  L  S  Y  L  S  S  N  I  K  S  L  V  K  D  E  T  L  C  T  T  T  *  Y  T  K  K  K  K  K  L  R  I  H  L  V  V  G  L  L  T  N  I  I  I  Y  L  Y  N  S  C  H  H  S  D  *  A  S  F  C  L  L  T  N  S  N  Q  K  T  K  L  E  S  C  </second_frame>
            <third_frame>   I  T  N  M  I  R  *  F  A  K  Y  S  Q  M  E  P  C  T  K  S  S  R  *  L  Q  S  I  G  H  I  K  R  K  L  S  I  H  I  F  L  H  V  S  Y  K  E  R  K  K  I  S  K  K  L  F  F  S  A  K  V  F  K  I  R  I  G  A  S  I  E  F  E  L  R  F  V  R  S  I  R  G  D  A  P  N  K  I  F  F  H  T  *  A  R  T  *  N  L  *  L  R  M  K  H  Y  A  P  Q  L  N  I  Q  K  R  K  K  N  Y  A  Y  I  W  *  L  V  Y  *  L  I  S  L  Y  I  Y  I  I  L  A  I  I  R  I  K  L  L  F  A  C  *  R  T  L  T  K  K  P  N  L  K  V  V </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0053H21.1" strand="-"/>
                <serials PGL_serial="24" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="113425" stop="113210"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>213</number_coding_nucleotides>
                  <number_encoded_amino_acids>71</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>YNKHDKIICKIFPNGALYKIFKVTTINRTYKEKTVDTYFLACILQRKKENIQKAFFFGQSVQNPYWSFDRI*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0053H21.1" strand="-"/>
                <serials PGL_serial="24" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="113355" stop="113149"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>204</number_coding_nucleotides>
                  <number_encoded_amino_acids>68</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LQSIGHIKRKLSIHIFLHVSYKERKKISKKLFFSAKVFKIRIGASIEFELRFVRSIRGDAPNKIFFHT*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="25" PGL_strand="-" PGL_start="121589" PGL_stop="118061"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="121589" e_stop="120787"/>
            <exon e_start="120301" e_stop="120149"/>
            <exon e_start="119972" e_stop="119895"/>
            <exon e_start="119726" e_stop="119631"/>
            <exon e_start="118791" e_stop="118756"/>
            <exon e_start="118642" e_stop="118461"/>
            <exon e_start="118383" e_stop="118061"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.996" acc_prob="0.115" e_score="0.998"/>
          <exon-intron don_prob="0.997" acc_prob="0.849" e_score="1.000"/>
          <exon-intron don_prob="0.831" acc_prob="0.341" e_score="1.000"/>
          <exon-intron don_prob="0.990" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.959" acc_prob="0.334" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.996" e_score="1.000"/>
          <exon-only e_score="0.991"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="121589" e_stop="120787" e_length="803"/>
          </exon>
          <intron i_serial="1" don_prob="0.996" acc_prob="0.115">
            <gDNA_intron_boundary i_start="120786" i_stop="120302" i_length="485"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="120301" e_stop="120149" e_length="153"/>
          </exon>
          <intron i_serial="2" don_prob="0.997" acc_prob="0.849">
            <gDNA_intron_boundary i_start="120148" i_stop="119973" i_length="176"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="119972" e_stop="119895" e_length="78"/>
          </exon>
          <intron i_serial="3" don_prob="0.831" acc_prob="0.341">
            <gDNA_intron_boundary i_start="119894" i_stop="119727" i_length="168"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="119726" e_stop="119631" e_length="96"/>
          </exon>
          <intron i_serial="4" don_prob="0.990" acc_prob="0.995">
            <gDNA_intron_boundary i_start="119630" i_stop="118792" i_length="839"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="118791" e_stop="118756" e_length="36"/>
          </exon>
          <intron i_serial="5" don_prob="0.959" acc_prob="0.334">
            <gDNA_intron_boundary i_start="118755" i_stop="118643" i_length="113"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="118642" e_stop="118461" e_length="182"/>
          </exon>
          <intron i_serial="6" don_prob="0.998" acc_prob="0.996">
            <gDNA_intron_boundary i_start="118460" i_stop="118384" i_length="77"/>
          </intron>
          <exon e_serial="7" e_score="0.991">
            <gDNA_exon_boundary e_start="118383" e_stop="118061" e_length="323"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="121589" stop="120787"/>
              <exon start="120301" stop="120149"/>
              <exon start="119972" stop="119895"/>
              <exon start="119726" stop="119631"/>
              <exon start="118791" stop="118756"/>
              <exon start="118642" stop="118461"/>
              <exon start="118383" stop="118061"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U576761" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="25" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GTGGTATGACTTTAACTTGATCCAACCTAACCTTCTAATTTAAGACTTTTATACTCCCTTCATTCCAAAAATAATTTTCGTCTTTTTATCATCCCAAATTATTTGTCTAAGTTTAAAACAAAATTAAGTTAGTATTGTTTTTCAAATAGGAATCAGAGAGAGCACAAAAGAACTCGTGGAACAATGAGAAATGAAGGTAACAGTGGTGTGCAAGGATAATCTTTCCACGTTGCAACACAAGTTACCCACGAATTTGCTTTGAGTACCACAAAAAATGCTTCATATTTATTTACAATCTATAATTCAAGATAATCCTATGTAGGAGCCACATAAGTGGACCACAACGTTTAAACTGGTGGTCGAACACACACAATCCAAAAGAGCAGCTCTCAGTTGGCTGATTCTAATTGGACAAAGATAAGAAATTATAAAGATCGTCATTTTTGGGGGAGATAACAGAGAATATTCAACTACTGATAATTTTCCATCACGTATGATGCATGGTCAAAAAAAAAAAAGAACTTCTATCTAGCTACTTTTTCTTCTGAATTCTATGGTTGCAAGAAAATTCACAAATGCTAAGGCTAAATTTATATGGCTCCATAGTTTCTAGTCCGATAGAAGTCAACAAAAGCTGCCGCTCGTGGATCATTTTATCGAACAAAGCAACGATTGTATGTCGGAGGAACATTCGAGTTAAAGCCCTGAAAGATGGGATGAACGGTGGCACGAATGGCAGTGGATTAGGTGGTCGTAGTTGGGACCCAGGCTTGGAAATTGAGGTGCCATTTGAACAAAGGCCG : GTGAATGAGTACTCATCTCTGAAAGATGAAACTTTATACTCTTGGGCAGAACTGGGTCCAGGGGCCTTCTTCCTACGTCTCGGGGGACTTTGGTTAGTCACTTTCGCAGTTTTGGGAGTACCTATTGCTGCTGCAAGCTTCAATCCTTCAAAG : GATCCTTTAAGATTTCTCCTGGCTGCAAGTACGGGGACTCTTTTTCTTGTTGCACTGATTGTCCTAAGAATTTATCTG : GGATGGAGCTATGTTGGAGATAGGCTTTTATCAGCAGTTATACCTTATGAAGAGACTGGATGGTATGATGGGCAGATGTGGGTGAAGCCCCCAGAG : ATCTTAGCTCGGGATAGGCTGTTGGGATCTTATAAG : GTGAAACCAGTCATTAAAATGCTGAAGCAAACGCTAGTTGGAACAGGGGCTTTGCTTGTTGCAGCAGTCTCATTATTCATATTTGCAACACCAGTAGAAGATTTTTTCCGCAATACTTTCACAACAAACGAGAACTCATTGAGTTCCACCTCAACAAACAGCACAAATAAACTAGGCATCAG : GAAAGAAGAACTGTTGCGCTTGCCACTGGAAGTCAAGGAGGACGATGATCTAGCAAAAGCTGCCGCTGAAGCAGCTGATGGAAGGCCAGTTTACTGCAGAGATAGGTATTATCGTGCATTGGCCGGTGGACAGTACTGCAAATGGGAAGACTTAGTTAAATAAGAGGATATATATAAGTGAAGAAAGCTACAGTTAAATTCTGTGATTGCTCAAAAGATCTGTACAATTGAGCCTCTTCTTATAATTTTAACGAAGAAATTTTGATGTTTTATGCATTAGATAATGCGCATGCAAAGAACAAAAGAAAGAGAATCATAACCCA</gDNA_template>
            <first_frame> V  V  *  L  *  L  D  P  T  *  P  S  N  L  R  L  L  Y  S  L  H  S  K  N  N  F  R  L  F  I  I  P  N  Y  L  S  K  F  K  T  K  L  S  *  Y  C  F  S  N  R  N  Q  R  E  H  K  R  T  R  G  T  M  R  N  E  G  N  S  G  V  Q  G  *  S  F  H  V  A  T  Q  V  T  H  E  F  A  L  S  T  T  K  N  A  S  Y  L  F  T  I  Y  N  S  R  *  S  Y  V  G  A  T  *  V  D  H  N  V  *  T  G  G  R  T  H  T  I  Q  K  S  S  S  Q  L  A  D  S  N  W  T  K  I  R  N  Y  K  D  R  H  F  W  G  R  *  Q  R  I  F  N  Y  *  *  F  S  I  T  Y  D  A  W  S  K  K  K  K  N  F  Y  L  A  T  F  S  S  E  F  Y  G  C  K  K  I  H  K  C  *  G  *  I  Y  M  A  P  *  F  L  V  R  *  K  S  T  K  A  A  A  R  G  S  F  Y  R  T  K  Q  R  L  Y  V  G  G  T  F  E  L  K  P  *  K  M  G  *  T  V  A  R  M  A  V  D  *  V  V  V  V  G  T  Q  A  W  K  L  R  C  H  L  N  K  G  R :   *  M  S  T  H  L  *  K  M  K  L  Y  T  L  G  Q  N  W  V  Q  G  P  S  S  Y  V  S  G  D  F  G  *  S  L  S  Q  F  W  E  Y  L  L  L  L  Q  A  S  I  L  Q  R :   I  L  *  D  F  S  W  L  Q  V  R  G  L  F  F  L  L  H  *  L  S  *  E  F  I  W :   D  G  A  M  L  E  I  G  F  Y  Q  Q  L  Y  L  M  K  R  L  D  G  M  M  G  R  C  G  *  S  P  Q  R :   S  *  L  G  I  G  C  W  D  L  I  R :   *  N  Q  S  L  K  C  *  S  K  R  *  L  E  Q  G  L  C  L  L  Q  Q  S  H  Y  S  Y  L  Q  H  Q  *  K  I  F  S  A  I  L  S  Q  Q  T  R  T  H  *  V  P  P  Q  Q  T  A  Q  I  N  *  A  S   : G  K  K  N  C  C  A  C  H  W  K  S  R  R  T  M  I  *  Q  K  L  P  L  K  Q  L  M  E  G  Q  F  T  A  E  I  G  I  I  V  H  W  P  V  D  S  T  A  N  G  K  T  *  L  N  K  R  I  Y  I  S  E  E  S  Y  S  *  I  L  *  L  L  K  R  S  V  Q  L  S  L  F  L  *  F  *  R  R  N  F  D  V  L  C  I  R  *  C  A  C  K  E  Q  K  K  E  N  H  N  P </first_frame>
            <second_frame>  W  Y  D  F  N  L  I  Q  P  N  L  L  I  *  D  F  Y  T  P  F  I  P  K  I  I  F  V  F  L  S  S  Q  I  I  C  L  S  L  K  Q  N  *  V  S  I  V  F  Q  I  G  I  R  E  S  T  K  E  L  V  E  Q  *  E  M  K  V  T  V  V  C  K  D  N  L  S  T  L  Q  H  K  L  P  T  N  L  L  *  V  P  Q  K  M  L  H  I  Y  L  Q  S  I  I  Q  D  N  P  M  *  E  P  H  K  W  T  T  T  F  K  L  V  V  E  H  T  Q  S  K  R  A  A  L  S  W  L  I  L  I  G  Q  R  *  E  I  I  K  I  V  I  F  G  G  D  N  R  E  Y  S  T  T  D  N  F  P  S  R  M  M  H  G  Q  K  K  K  R  T  S  I  *  L  L  F  L  L  N  S  M  V  A  R  K  F  T  N  A  K  A  K  F  I  W  L  H  S  F  *  S  D  R  S  Q  Q  K  L  P  L  V  D  H  F  I  E  Q  S  N  D  C  M  S  E  E  H  S  S  *  S  P  E  R  W  D  E  R  W  H  E  W  Q  W  I  R  W  S  *  L  G  P  R  L  G  N  *  G  A  I  *  T  K  A   : G  E  *  V  L  I  S  E  R  *  N  F  I  L  L  G  R  T  G  S  R  G  L  L  P  T  S  R  G  T  L  V  S  H  F  R  S  F  G  S  T  Y  C  C  C  K  L  Q  S  F  K   : G  S  F  K  I  S  P  G  C  K  Y  G  D  S  F  S  C  C  T  D  C  P  K  N  L  S   : G  M  E  L  C  W  R  *  A  F  I  S  S  Y  T  L  *  R  D  W  M  V  *  W  A  D  V  G  E  A  P  R   : D  L  S  S  G  *  A  V  G  I  L  *   : G  E  T  S  H  *  N  A  E  A  N  A  S  W  N  R  G  F  A  C  C  S  S  L  I  I  H  I  C  N  T  S  R  R  F  F  P  Q  Y  F  H  N  K  R  E  L  I  E  F  H  L  N  K  Q  H  K  *  T  R  H  Q  :  E  R  R  T  V  A  L  A  T  G  S  Q  G  G  R  *  S  S  K  S  C  R  *  S  S  *  W  K  A  S  L  L  Q  R  *  V  L  S  C  I  G  R  W  T  V  L  Q  M  G  R  L  S  *  I  R  G  Y  I  *  V  K  K  A  T  V  K  F  C  D  C  S  K  D  L  Y  N  *  A  S  S  Y  N  F  N  E  E  I  L  M  F  Y  A  L  D  N  A  H  A  K  N  K  R  K  R  I  I  T   </second_frame>
            <third_frame>   G  M  T  L  T  *  S  N  L  T  F  *  F  K  T  F  I  L  P  S  F  Q  K  *  F  S  S  F  Y  H  P  K  L  F  V  *  V  *  N  K  I  K  L  V  L  F  F  K  *  E  S  E  R  A  Q  K  N  S  W  N  N  E  K  *  R  *  Q  W  C  A  R  I  I  F  P  R  C  N  T  S  Y  P  R  I  C  F  E  Y  H  K  K  C  F  I  F  I  Y  N  L  *  F  K  I  I  L  C  R  S  H  I  S  G  P  Q  R  L  N  W  W  S  N  T  H  N  P  K  E  Q  L  S  V  G  *  F  *  L  D  K  D  K  K  L  *  R  S  S  F  L  G  E  I  T  E  N  I  Q  L  L  I  I  F  H  H  V  *  C  M  V  K  K  K  K  E  L  L  S  S  Y  F  F  F  *  I  L  W  L  Q  E  N  S  Q  M  L  R  L  N  L  Y  G  S  I  V  S  S  P  I  E  V  N  K  S  C  R  S  W  I  I  L  S  N  K  A  T  I  V  C  R  R  N  I  R  V  K  A  L  K  D  G  M  N  G  G  T  N  G  S  G  L  G  G  R  S  W  D  P  G  L  E  I  E  V  P  F  E  Q  R  P  :  V  N  E  Y  S  S  L  K  D  E  T  L  Y  S  W  A  E  L  G  P  G  A  F  F  L  R  L  G  G  L  W  L  V  T  F  A  V  L  G  V  P  I  A  A  A  S  F  N  P  S  K  :  D  P  L  R  F  L  L  A  A  S  T  G  T  L  F  L  V  A  L  I  V  L  R  I  Y  L  :  G  W  S  Y  V  G  D  R  L  L  S  A  V  I  P  Y  E  E  T  G  W  Y  D  G  Q  M  W  V  K  P  P  E  :  I  L  A  R  D  R  L  L  G  S  Y  K  :  V  K  P  V  I  K  M  L  K  Q  T  L  V  G  T  G  A  L  L  V  A  A  V  S  L  F  I  F  A  T  P  V  E  D  F  F  R  N  T  F  T  T  N  E  N  S  L  S  S  T  S  T  N  S  T  N  K  L  G  I  R :   K  E  E  L  L  R  L  P  L  E  V  K  E  D  D  D  L  A  K  A  A  A  E  A  A  D  G  R  P  V  Y  C  R  D  R  Y  Y  R  A  L  A  G  G  Q  Y  C  K  W  E  D  L  V  K  *  E  D  I  Y  K  *  R  K  L  Q  L  N  S  V  I  A  Q  K  I  C  T  I  E  P  L  L  I  I  L  T  K  K  F  *  C  F  M  H  *  I  M  R  M  Q  R  T  K  E  R  E  S  *  P  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0053H21.1" strand="-"/>
                <serials PGL_serial="25" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="121041" stop="120787"/>
                    <exon start="120301" stop="120149"/>
                    <exon start="119972" stop="119895"/>
                    <exon start="119726" stop="119631"/>
                    <exon start="118791" stop="118756"/>
                    <exon start="118642" stop="118461"/>
                    <exon start="118383" stop="118221"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>960</number_coding_nucleotides>
                  <number_encoded_amino_acids>320</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ILWLQENSQMLRLNLYGSIVSSPIEVNKSCRSWIILSNKATIVCRRNIRVKALKDGMNGGTNGSGLGGRSWDPGLEIEVPFEQRPVNEYSSLKDETLYSWAELGPGAFFLRLGGLWLVTFAVLGVPIAAASFNPSKDPLRFLLAASTGTLFLVALIVLRIYLGWSYVGDRLLSAVIPYEETGWYDGQMWVKPPEILARDRLLGSYKVKPVIKMLKQTLVGTGALLVAAVSLFIFATPVEDFFRNTFTTNENSLSSTSTNSTNKLGIRKEELLRLPLEVKEDDDLAKAAAEAADGRPVYCRDRYYRALAGGQYCKWEDLVK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="26" PGL_strand="+" PGL_start="126676" PGL_stop="132037"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="126676" e_stop="126943"/>
            <exon e_start="127014" e_stop="127130"/>
            <exon e_start="128018" e_stop="128175"/>
            <exon e_start="128540" e_stop="128642"/>
            <exon e_start="129834" e_stop="129929"/>
            <exon e_start="130547" e_stop="130612"/>
            <exon e_start="130702" e_stop="130821"/>
            <exon e_start="131647" e_stop="132037"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.983" acc_prob="0.637" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.949" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.967" e_score="1.000"/>
          <exon-intron don_prob="0.952" acc_prob="0.968" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.383" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.942" e_score="0.970"/>
          <exon-intron don_prob="0.879" acc_prob="0.890" e_score="1.000"/>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="126676" e_stop="126943" e_length="268"/>
          </exon>
          <intron i_serial="1" don_prob="0.983" acc_prob="0.637">
            <gDNA_intron_boundary i_start="126944" i_stop="127013" i_length="70"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="127014" e_stop="127130" e_length="117"/>
          </exon>
          <intron i_serial="2" don_prob="0.998" acc_prob="0.949">
            <gDNA_intron_boundary i_start="127131" i_stop="128017" i_length="887"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="128018" e_stop="128175" e_length="158"/>
          </exon>
          <intron i_serial="3" don_prob="0.997" acc_prob="0.967">
            <gDNA_intron_boundary i_start="128176" i_stop="128539" i_length="364"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="128540" e_stop="128642" e_length="103"/>
          </exon>
          <intron i_serial="4" don_prob="0.952" acc_prob="0.968">
            <gDNA_intron_boundary i_start="128643" i_stop="129833" i_length="1191"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="129834" e_stop="129929" e_length="96"/>
          </exon>
          <intron i_serial="5" don_prob="0.995" acc_prob="0.383">
            <gDNA_intron_boundary i_start="129930" i_stop="130546" i_length="617"/>
          </intron>
          <exon e_serial="6" e_score="0.970">
            <gDNA_exon_boundary e_start="130547" e_stop="130612" e_length="66"/>
          </exon>
          <intron i_serial="6" don_prob="0.998" acc_prob="0.942">
            <gDNA_intron_boundary i_start="130613" i_stop="130701" i_length="89"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="130702" e_stop="130821" e_length="120"/>
          </exon>
          <intron i_serial="7" don_prob="0.879" acc_prob="0.890">
            <gDNA_intron_boundary i_start="130822" i_stop="131646" i_length="825"/>
          </intron>
          <exon e_serial="8" e_score="0.997">
            <gDNA_exon_boundary e_start="131647" e_stop="132037" e_length="391"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="126676" stop="126943"/>
              <exon start="127014" stop="127130"/>
              <exon start="128018" stop="128175"/>
              <exon start="128540" stop="128642"/>
              <exon start="129834" stop="129880"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U590671" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="126695" stop="126943"/>
              <exon start="127014" stop="127130"/>
              <exon start="128018" stop="128175"/>
              <exon start="128540" stop="128642"/>
              <exon start="129834" stop="129929"/>
              <exon start="130547" stop="130612"/>
              <exon start="130702" stop="130821"/>
              <exon start="131647" stop="132037"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U578386" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="26" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCAGCAAAAAAGAGAAAAAAATTCCCGCCGGGTGCAGAAGTCAAAGAATCGTACACATGCAAACCATCAGTCTGTCATTAAATAGTGCACTGAAATTATCATTCTCAAACTTAAACCAATCGGATTCGCCATCAGGAAGAAGATGAAGAGCAAAGGTAGATTAGTGGGACAAAGATGGCGGAGCATAGGGGGCTTACCTTCAATATTTCTGCTATGTCTTTTCTTGTTCTTCGCCGGTTTATTCGGTTCTACTCTCGTTTCTCATCAG : GATGTACAACTACTTACTGTACGGCCTAGGTCAAGGGTGCTTAAATCTGTGGAAGAATTTGATGTTTTGCCTAATGGCGACACTGGAGAACACTCCCTTACTTCCATCCCCTTCCAG : GTCTTAAGCTGGTTCCCACGTGCATTATACTTTCCCAATTTCGCAACTACAGAACAATGCCAAGGCATAATTAAGATGGCAAAGGCAGAACTGAAACCATCATCTTTGGCTCTCCGCAAAGGAGAAACAGCAGAAAATACCAAAGGAGTTAGAACAAG : TTCTGGTATGTTTATCAGTGCATCTGAAGACAAAACTGGAATTCTGGACCTCATTGAGGAGAAAATCGCAAAGGCGACTATGATCCCCAGGACACACGGAGAG : GCATTTAATGTTTTGCGGTACGAAATAGGCCAGAGTTATTATTCACATTATGATGCGTTTGATCCTTCTCAATATGGTCCTCAGAAGAGCCAAAGG : GTTGCATCCTTTTTGTTATATTTATCTGATGTGGAAGAAGGTGGAGAAACCATGTTCCCTTTCGAG : AATGCACAGAATATGGATGTTAATTATGACTTCCGCAAGTGTATTGGTCTGAAAGTGAAGCCGCGTAGAGGGGATGGACTACTATTTTACTCGCTGTTTCCAAATGGTACAATTGATCCG : ACATCTCTTCACGGGAGCTGTGCAGTAATCCGAGGTGAAAAATGGGTTGCCACAAAGTGGATCAGGGATCAAGAAATGGATGAATAAACGAGTACATGTCTGGAAGTGGTGTTAATATAATTCTTTCGTAATTTAATGTAGCCACTCACTGGAACCTTTGAGCGAATTTTACAGTAAATATATCTAGTGTTTGTTCATATTGATCTGTGTCAGTTAACCCTTAATACGTTACTTGAGTCTTGGTTGCTCCCATTACCCACAAAGCTCACCCCATCTTGCAGTAAAAAAGAAGTCTAATTGTAATGACCGTGCGAATGTTTTGTAATAGGATCAGATCACGTGTTTCAAAAGTGTTGTACTAACACAAATATTATTATGACGCTAAAAAGAA</gDNA_template>
            <first_frame> S  A  K  K  R  K  K  F  P  P  G  A  E  V  K  E  S  Y  T  C  K  P  S  V  C  H  *  I  V  H  *  N  Y  H  S  Q  T  *  T  N  R  I  R  H  Q  E  E  D  E  E  Q  R  *  I  S  G  T  K  M  A  E  H  R  G  L  T  F  N  I  S  A  M  S  F  L  V  L  R  R  F  I  R  F  Y  S  R  F  S  S   : G  C  T  T  T  Y  C  T  A  *  V  K  G  A  *  I  C  G  R  I  *  C  F  A  *  W  R  H  W  R  T  L  P  Y  F  H  P  L  P   : G  L  K  L  V  P  T  C  I  I  L  S  Q  F  R  N  Y  R  T  M  P  R  H  N  *  D  G  K  G  R  T  E  T  I  I  F  G  S  P  Q  R  R  N  S  R  K  Y  Q  R  S  *  N  K  :  F  W  Y  V  Y  Q  C  I  *  R  Q  N  W  N  S  G  P  H  *  G  E  N  R  K  G  D  Y  D  P  Q  D  T  R  R   : G  I  *  C  F  A  V  R  N  R  P  E  L  L  F  T  L  *  C  V  *  S  F  S  I  W  S  S  E  E  P  K   : G  C  I  L  F  V  I  F  I  *  C  G  R  R  W  R  N  H  V  P  F  R   : E  C  T  E  Y  G  C  *  L  *  L  P  Q  V  Y  W  S  E  S  E  A  A  *  R  G  W  T  T  I  L  L  A  V  S  K  W  Y  N  *  S   : D  I  S  S  R  E  L  C  S  N  P  R  *  K  M  G  C  H  K  V  D  Q  G  S  R  N  G  *  I  N  E  Y  M  S  G  S  G  V  N  I  I  L  S  *  F  N  V  A  T  H  W  N  L  *  A  N  F  T  V  N  I  S  S  V  C  S  Y  *  S  V  S  V  N  P  *  Y  V  T  *  V  L  V  A  P  I  T  H  K  A  H  P  I  L  Q  *  K  R  S  L  I  V  M  T  V  R  M  F  C  N  R  I  R  S  R  V  S  K  V  L  Y  *  H  K  Y  Y  Y  D  A  K  K   </first_frame>
            <second_frame>  Q  Q  K  R  E  K  N  S  R  R  V  Q  K  S  K  N  R  T  H  A  N  H  Q  S  V  I  K  *  C  T  E  I  I  I  L  K  L  K  P  I  G  F  A  I  R  K  K  M  K  S  K  G  R  L  V  G  Q  R  W  R  S  I  G  G  L  P  S  I  F  L  L  C  L  F  L  F  F  A  G  L  F  G  S  T  L  V  S  H  Q  :  D  V  Q  L  L  T  V  R  P  R  S  R  V  L  K  S  V  E  E  F  D  V  L  P  N  G  D  T  G  E  H  S  L  T  S  I  P  F  Q  :  V  L  S  W  F  P  R  A  L  Y  F  P  N  F  A  T  T  E  Q  C  Q  G  I  I  K  M  A  K  A  E  L  K  P  S  S  L  A  L  R  K  G  E  T  A  E  N  T  K  G  V  R  T  S :   S  G  M  F  I  S  A  S  E  D  K  T  G  I  L  D  L  I  E  E  K  I  A  K  A  T  M  I  P  R  T  H  G  E  :  A  F  N  V  L  R  Y  E  I  G  Q  S  Y  Y  S  H  Y  D  A  F  D  P  S  Q  Y  G  P  Q  K  S  Q  R  :  V  A  S  F  L  L  Y  L  S  D  V  E  E  G  G  E  T  M  F  P  F  E  :  N  A  Q  N  M  D  V  N  Y  D  F  R  K  C  I  G  L  K  V  K  P  R  R  G  D  G  L  L  F  Y  S  L  F  P  N  G  T  I  D  P  :  T  S  L  H  G  S  C  A  V  I  R  G  E  K  W  V  A  T  K  W  I  R  D  Q  E  M  D  E  *  T  S  T  C  L  E  V  V  L  I  *  F  F  R  N  L  M  *  P  L  T  G  T  F  E  R  I  L  Q  *  I  Y  L  V  F  V  H  I  D  L  C  Q  L  T  L  N  T  L  L  E  S  W  L  L  P  L  P  T  K  L  T  P  S  C  S  K  K  E  V  *  L  *  *  P  C  E  C  F  V  I  G  S  D  H  V  F  Q  K  C  C  T  N  T  N  I  I  M  T  L  K  R  </second_frame>
            <third_frame>   S  K  K  E  K  K  I  P  A  G  C  R  S  Q  R  I  V  H  M  Q  T  I  S  L  S  L  N  S  A  L  K  L  S  F  S  N  L  N  Q  S  D  S  P  S  G  R  R  *  R  A  K  V  D  *  W  D  K  D  G  G  A  *  G  A  Y  L  Q  Y  F  C  Y  V  F  S  C  S  S  P  V  Y  S  V  L  L  S  F  L  I  R :   M  Y  N  Y  L  L  Y  G  L  G  Q  G  C  L  N  L  W  K  N  L  M  F  C  L  M  A  T  L  E  N  T  P  L  L  P  S  P  S  R :   S  *  A  G  S  H  V  H  Y  T  F  P  I  S  Q  L  Q  N  N  A  K  A  *  L  R  W  Q  R  Q  N  *  N  H  H  L  W  L  S  A  K  E  K  Q  Q  K  I  P  K  E  L  E  Q   : V  L  V  C  L  S  V  H  L  K  T  K  L  E  F  W  T  S  L  R  R  K  S  Q  R  R  L  *  S  P  G  H  T  E  R :   H  L  M  F  C  G  T  K  *  A  R  V  I  I  H  I  M  M  R  L  I  L  L  N  M  V  L  R  R  A  K  G :   L  H  P  F  C  Y  I  Y  L  M  W  K  K  V  E  K  P  C  S  L  S  R :   M  H  R  I  W  M  L  I  M  T  S  A  S  V  L  V  *  K  *  S  R  V  E  G  M  D  Y  Y  F  T  R  C  F  Q  M  V  Q  L  I  R :   H  L  F  T  G  A  V  Q  *  S  E  V  K  N  G  L  P  Q  S  G  S  G  I  K  K  W  M  N  K  R  V  H  V  W  K  W  C  *  Y  N  S  F  V  I  *  C  S  H  S  L  E  P  L  S  E  F  Y  S  K  Y  I  *  C  L  F  I  L  I  C  V  S  *  P  L  I  R  Y  L  S  L  G  C  S  H  Y  P  Q  S  S  P  H  L  A  V  K  K  K  S  N  C  N  D  R  A  N  V  L  *  *  D  Q  I  T  C  F  K  S  V  V  L  T  Q  I  L  L  *  R  *  K  E </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0053H21.1" strand="+"/>
                <serials PGL_serial="26" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="126761" stop="126943"/>
                    <exon start="127014" stop="127130"/>
                    <exon start="128018" stop="128175"/>
                    <exon start="128540" stop="128642"/>
                    <exon start="129834" stop="129929"/>
                    <exon start="130547" stop="130612"/>
                    <exon start="130702" stop="130821"/>
                    <exon start="131647" stop="131733"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>927</number_coding_nucleotides>
                  <number_encoded_amino_acids>309</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CTEIIILKLKPIGFAIRKKMKSKGRLVGQRWRSIGGLPSIFLLCLFLFFAGLFGSTLVSHQDVQLLTVRPRSRVLKSVEEFDVLPNGDTGEHSLTSIPFQVLSWFPRALYFPNFATTEQCQGIIKMAKAELKPSSLALRKGETAENTKGVRTSSGMFISASEDKTGILDLIEEKIAKATMIPRTHGEAFNVLRYEIGQSYYSHYDAFDPSQYGPQKSQRVASFLLYLSDVEEGGETMFPFENAQNMDVNYDFRKCIGLKVKPRRGDGLLFYSLFPNGTIDPTSLHGSCAVIRGEKWVATKWIRDQEMDE*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="27" PGL_strand="-" PGL_start="131842" PGL_stop="131740"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="131842" e_stop="131740"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.903"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.903">
            <gDNA_exon_boundary e_start="131842" e_stop="131740" e_length="103"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="131842" stop="131740"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U590330" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="27" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GAACAAACACTAGATATATTTACTGTAAAATTCGCTCAAAGGTTCCAGTGAGTGGCTACATTAAATTACGAAAGAATTATATTAACACCACTTCCAGACATGT</gDNA_template>
            <first_frame> E  Q  T  L  D  I  F  T  V  K  F  A  Q  R  F  Q  *  V  A  T  L  N  Y  E  R  I  I  L  T  P  L  P  D  M  </first_frame>
            <second_frame>  N  K  H  *  I  Y  L  L  *  N  S  L  K  G  S  S  E  W  L  H  *  I  T  K  E  L  Y  *  H  H  F  Q  T  C </second_frame>
            <third_frame>   T  N  T  R  Y  I  Y  C  K  I  R  S  K  V  P  V  S  G  Y  I  K  L  R  K  N  Y  I  N  T  T  S  R  H   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02SLe0053H21.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="28" PGL_strand="+" PGL_start="135857" PGL_stop="137320"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="135857" e_stop="137320"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.999"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.999">
            <gDNA_exon_boundary e_start="135857" e_stop="137320" e_length="1464"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="135857" stop="137320"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U583743" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="28" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTTTTTTATAATATAATCTATATAAATTAATACCATTCAAATGCATGCATTGTTAAATTAAAGTAGTCCCCACCATCTTCACTCTTCCCAAGTAGTAACAGAGAAGCCCAACTTTATTTTTCTCCGTAATAATCATTTGAAAGGCTTAAAAAAGCTCCACGCTGCTAAAAAAAAAGCCGGCTTTATTTGCGCCCCAATAGTATTCTTGACTTACAAACAAGGAACGAACAATTTTCTATTGTCGCCTGCAAGCTTATTCCTACATCCCATTTGTCTCCCTCTTTATATAACTGTTCCTCTTTTTTAACTATATTATTCTATATCGACCTCGATCAACAAGAACAAGAGCAAGAAAAAATGATGAAAATTACTAGGGAAAGCGAAGAAATTGTTCTCCTCGAAGAACAATACGATGAATTAGAAGACGAATATGATGAAGAAGCATTATCACTGTGTGATCTTCCGAACAATGAAGAGGACGAAAAGAAGGAAGAAGTTTCTAGAAGTACTAGCGTAGAAGGCGGACAATTAGAAGATTTTGATTTTAGCTCTTCTGGTGGTAATTTGTTGAAAGAATCAGAGATGTGTACGGCAGATGAAATTTTCTACAAAGGCCAAATATTACCGTTGCGTCATTCAATTAGTTTGCCAAGTGATCGGCGCAATTGTCATGATACAAATTCAAGCAGTAGAAGTAGCAGTATTCGAAGCCAACGTTCATCTAGCAGTGGCAGTTCATCTAATTTCAACACGAAATATCAGCCTAAAATTCGAAATCAATTTCATTCTCATCCTAGTCCAACACCTCAGGTTCGATTTTCTAAAGTTAGTTTTCAATCAAATGTCAACAATTCCACACGAAAATCAGCATTGTGGAGTCTATTTCGCGTTGGCCTAGTTACACCACCAGAAATTGCATTACAAGATCTGAAAAACAGAGGAAACAGGGATATTTCAGGAAGTCGAAATAGCACGAGCAGTAGTAGCAGCGGGAGCTTCGGCAATAATGATAATAAGATGAGAATTAAGAAAACGAAACAGAGGTTTTCTCTAGGCAGCTGTAAATGTTCAGCAAATGTGGTAGAAACAGTTCCAATCGTGAACAGTAGAAGTACAATTAAGAAAATAAGAAAAGCCACAGGGGACCATGAACATGAAGATAAGAAGGATTCATCAGAGAATATCAAATCGACAAAAAAGCAAGCAATGTCACGTCATCGAACGTTTGAGTGGTTAAAGCAACTTTCACTAGAAGGTCCATCAGATGAAACATAAAGATTTCAAAGTATCACGCATGCTTAGCTTCTTTTTTTTCTTCTTTTTTTCATGTAATGTAATGTAACTTTTTTTTTTTTTTGAGTAGTGGAATCATGAAGTTGATTAATTGAAGTAATTGAGGACGCAATTATAATGGTAGCCAAAAAAGAGCTAAGGTGTACGTTTGATGTGAACTGTGATTAAATA</gDNA_template>
            <first_frame> F  F  Y  N  I  I  Y  I  N  *  Y  H  S  N  A  C  I  V  K  L  K  *  S  P  P  S  S  L  F  P  S  S  N  R  E  A  Q  L  Y  F  S  P  *  *  S  F  E  R  L  K  K  A  P  R  C  *  K  K  S  R  L  Y  L  R  P  N  S  I  L  D  L  Q  T  R  N  E  Q  F  S  I  V  A  C  K  L  I  P  T  S  H  L  S  P  S  L  Y  N  C  S  S  F  L  T  I  L  F  Y  I  D  L  D  Q  Q  E  Q  E  Q  E  K  M  M  K  I  T  R  E  S  E  E  I  V  L  L  E  E  Q  Y  D  E  L  E  D  E  Y  D  E  E  A  L  S  L  C  D  L  P  N  N  E  E  D  E  K  K  E  E  V  S  R  S  T  S  V  E  G  G  Q  L  E  D  F  D  F  S  S  S  G  G  N  L  L  K  E  S  E  M  C  T  A  D  E  I  F  Y  K  G  Q  I  L  P  L  R  H  S  I  S  L  P  S  D  R  R  N  C  H  D  T  N  S  S  S  R  S  S  S  I  R  S  Q  R  S  S  S  S  G  S  S  S  N  F  N  T  K  Y  Q  P  K  I  R  N  Q  F  H  S  H  P  S  P  T  P  Q  V  R  F  S  K  V  S  F  Q  S  N  V  N  N  S  T  R  K  S  A  L  W  S  L  F  R  V  G  L  V  T  P  P  E  I  A  L  Q  D  L  K  N  R  G  N  R  D  I  S  G  S  R  N  S  T  S  S  S  S  S  G  S  F  G  N  N  D  N  K  M  R  I  K  K  T  K  Q  R  F  S  L  G  S  C  K  C  S  A  N  V  V  E  T  V  P  I  V  N  S  R  S  T  I  K  K  I  R  K  A  T  G  D  H  E  H  E  D  K  K  D  S  S  E  N  I  K  S  T  K  K  Q  A  M  S  R  H  R  T  F  E  W  L  K  Q  L  S  L  E  G  P  S  D  E  T  *  R  F  Q  S  I  T  H  A  *  L  L  F  F  L  L  F  F  M  *  C  N  V  T  F  F  F  F  *  V  V  E  S  *  S  *  L  I  E  V  I  E  D  A  I  I  M  V  A  K  K  E  L  R  C  T  F  D  V  N  C  D  *  I </first_frame>
            <second_frame>  F  F  I  I  *  S  I  *  I  N  T  I  Q  M  H  A  L  L  N  *  S  S  P  H  H  L  H  S  S  Q  V  V  T  E  K  P  N  F  I  F  L  R  N  N  H  L  K  G  L  K  K  L  H  A  A  K  K  K  A  G  F  I  C  A  P  I  V  F  L  T  Y  K  Q  G  T  N  N  F  L  L  S  P  A  S  L  F  L  H  P  I  C  L  P  L  Y  I  T  V  P  L  F  *  L  Y  Y  S  I  S  T  S  I  N  K  N  K  S  K  K  K  *  *  K  L  L  G  K  A  K  K  L  F  S  S  K  N  N  T  M  N  *  K  T  N  M  M  K  K  H  Y  H  C  V  I  F  R  T  M  K  R  T  K  R  R  K  K  F  L  E  V  L  A  *  K  A  D  N  *  K  I  L  I  L  A  L  L  V  V  I  C  *  K  N  Q  R  C  V  R  Q  M  K  F  S  T  K  A  K  Y  Y  R  C  V  I  Q  L  V  C  Q  V  I  G  A  I  V  M  I  Q  I  Q  A  V  E  V  A  V  F  E  A  N  V  H  L  A  V  A  V  H  L  I  S  T  R  N  I  S  L  K  F  E  I  N  F  I  L  I  L  V  Q  H  L  R  F  D  F  L  K  L  V  F  N  Q  M  S  T  I  P  H  E  N  Q  H  C  G  V  Y  F  A  L  A  *  L  H  H  Q  K  L  H  Y  K  I  *  K  T  E  E  T  G  I  F  Q  E  V  E  I  A  R  A  V  V  A  A  G  A  S  A  I  M  I  I  R  *  E  L  R  K  R  N  R  G  F  L  *  A  A  V  N  V  Q  Q  M  W  *  K  Q  F  Q  S  *  T  V  E  V  Q  L  R  K  *  E  K  P  Q  G  T  M  N  M  K  I  R  R  I  H  Q  R  I  S  N  R  Q  K  S  K  Q  C  H  V  I  E  R  L  S  G  *  S  N  F  H  *  K  V  H  Q  M  K  H  K  D  F  K  V  S  R  M  L  S  F  F  F  F  F  F  F  S  C  N  V  M  *  L  F  F  F  F  E  *  W  N  H  E  V  D  *  L  K  *  L  R  T  Q  L  *  W  *  P  K  K  S  *  G  V  R  L  M  *  T  V  I  K   </second_frame>
            <third_frame>   F  L  *  Y  N  L  Y  K  L  I  P  F  K  C  M  H  C  *  I  K  V  V  P  T  I  F  T  L  P  K  *  *  Q  R  S  P  T  L  F  F  S  V  I  I  I  *  K  A  *  K  S  S  T  L  L  K  K  K  P  A  L  F  A  P  Q  *  Y  S  *  L  T  N  K  E  R  T  I  F  Y  C  R  L  Q  A  Y  S  Y  I  P  F  V  S  L  F  I  *  L  F  L  F  F  N  Y  I  I  L  Y  R  P  R  S  T  R  T  R  A  R  K  N  D  E  N  Y  *  G  K  R  R  N  C  S  P  R  R  T  I  R  *  I  R  R  R  I  *  *  R  S  I  I  T  V  *  S  S  E  Q  *  R  G  R  K  E  G  R  S  F  *  K  Y  *  R  R  R  R  T  I  R  R  F  *  F  *  L  F  W  W  *  F  V  E  R  I  R  D  V  Y  G  R  *  N  F  L  Q  R  P  N  I  T  V  A  S  F  N  *  F  A  K  *  S  A  Q  L  S  *  Y  K  F  K  Q  *  K  *  Q  Y  S  K  P  T  F  I  *  Q  W  Q  F  I  *  F  Q  H  E  I  S  A  *  N  S  K  S  I  S  F  S  S  *  S  N  T  S  G  S  I  F  *  S  *  F  S  I  K  C  Q  Q  F  H  T  K  I  S  I  V  E  S  I  S  R  W  P  S  Y  T  T  R  N  C  I  T  R  S  E  K  Q  R  K  Q  G  Y  F  R  K  S  K  *  H  E  Q  *  *  Q  R  E  L  R  Q  *  *  *  *  D  E  N  *  E  N  E  T  E  V  F  S  R  Q  L  *  M  F  S  K  C  G  R  N  S  S  N  R  E  Q  *  K  Y  N  *  E  N  K  K  S  H  R  G  P  *  T  *  R  *  E  G  F  I  R  E  Y  Q  I  D  K  K  A  S  N  V  T  S  S  N  V  *  V  V  K  A  T  F  T  R  R  S  I  R  *  N  I  K  I  S  K  Y  H  A  C  L  A  S  F  F  S  S  F  F  H  V  M  *  C  N  F  F  F  F  L  S  S  G  I  M  K  L  I  N  *  S  N  *  G  R  N  Y  N  G  S  Q  K  R  A  K  V  Y  V  *  C  E  L  *  L  N  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0053H21.1" strand="+"/>
                <serials PGL_serial="28" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="136025" stop="137131"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1104</number_coding_nucleotides>
                  <number_encoded_amino_acids>368</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KKSRLYLRPNSILDLQTRNEQFSIVACKLIPTSHLSPSLYNCSSFLTILFYIDLDQQEQEQEKMMKITRESEEIVLLEEQYDELEDEYDEEALSLCDLPNNEEDEKKEEVSRSTSVEGGQLEDFDFSSSGGNLLKESEMCTADEIFYKGQILPLRHSISLPSDRRNCHDTNSSSRSSSIRSQRSSSSGSSSNFNTKYQPKIRNQFHSHPSPTPQVRFSKVSFQSNVNNSTRKSALWSLFRVGLVTPPEIALQDLKNRGNRDISGSRNSTSSSSSGSFGNNDNKMRIKKTKQRFSLGSCKCSANVVETVPIVNSRSTIKKIRKATGDHEHEDKKDSSENIKSTKKQAMSRHRTFEWLKQLSLEGPSDET*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="29" PGL_strand="-" PGL_start="140793" PGL_stop="138274"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="140793" e_stop="140210"/>
            <exon e_start="138836" e_stop="138274"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.998" e_score="0.997"/>
          <exon-only e_score="0.991"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.997">
            <gDNA_exon_boundary e_start="140793" e_stop="140210" e_length="584"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.998">
            <gDNA_intron_boundary i_start="140209" i_stop="138837" i_length="1373"/>
          </intron>
          <exon e_serial="2" e_score="0.991">
            <gDNA_exon_boundary e_start="138836" e_stop="138274" e_length="563"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="140793" stop="140210"/>
              <exon start="138836" stop="138274"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U563725" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="29" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CGAGGCTACTTGTTGCCCGAGCTCACGCTTCGGACACCAAATCCCAGCAGGTCCAACCTCAAGTCGTTTCAAATTTACCGATGGAATCCAGATAACCCAGGGAAACCCGAGCTCCAAGAATACAAAATTGATCTGAAGGAATGTGGCCCTATGGTCTTAGACGCCCTAATCAAAATCAAGAATGAAGTTGACCCTTCACCAACCTTCAGAAGATCTTGCAGAGAAGGGATCTGTGGGTCCTGTGCCATGAACATCGACGGCTGTAATGGACTCGCTTGTTTGACAAAGATCTCATCGGATTCTGTATCGACGATTACGCCACTGCCACATATGTTTGTGATTAAGGATTTGGTAGTGGATATGACTAATTTTTATAATCAGTATAAGTCTATTGAGCCTTGGCTGAAGAGAAAAACACCTGCGCCAACGCCTGGAAAGGAGATACCTCAGAGCAAGAGCGATAAGGCTAAGTTGGATGGGATGTACGAGTGTATTCTCTGTGCTTGTTGTAGTACATCATGCCCTAGCTACTGGTGGAATCCTGAGTCTTATCTTGGTCCTGCTGCACTACTCCATGCCAATAG : ATGGATCATGGATAGCCGTGATGAACATACTCTGGAGCGCCTGGACGCAGTTAATGATGAATTCAAGCTTTATCGCTGCCACACTATTTTGAACTGTTCTCGTGCTTGCCCAAAGGGATTTAATCCTGGCAAGCTCAGAACATCAAGCGCCTGGAGATGGCGCCTTGAGCCTGCACTCTGCAGTGTAGTGTACCAGTCTATTCTGCTAACATTGATTTTGGAGGACCAGTAGGAGGTAGTTCTCAAAATAATTTATGCACAGATCGTAATTTGCTTTCTGAGATTTTTTTTTGGTGCTAGGGTGTTGCCCTTCCCCGAGCCCTGTGTGAATATGGGATTCTTTTGTGCACCGTGCTGCCTTATTCGAGATGAAAGGTGCATCTCACCTGAAATATTGTACTAACAATTAGTATGATAGCTGAAGTGAAGCAAACATGTAATAGCAGAGAGTATATACAAATTTATGAACTGATTTATCATAGAAAATAATGATTTCTATAAATATTCGTTTGAAATTATACCTCATAAAAACTTCATCAATTATATAAAACATTTCTTATATT</gDNA_template>
            <first_frame> R  G  Y  L  L  P  E  L  T  L  R  T  P  N  P  S  R  S  N  L  K  S  F  Q  I  Y  R  W  N  P  D  N  P  G  K  P  E  L  Q  E  Y  K  I  D  L  K  E  C  G  P  M  V  L  D  A  L  I  K  I  K  N  E  V  D  P  S  P  T  F  R  R  S  C  R  E  G  I  C  G  S  C  A  M  N  I  D  G  C  N  G  L  A  C  L  T  K  I  S  S  D  S  V  S  T  I  T  P  L  P  H  M  F  V  I  K  D  L  V  V  D  M  T  N  F  Y  N  Q  Y  K  S  I  E  P  W  L  K  R  K  T  P  A  P  T  P  G  K  E  I  P  Q  S  K  S  D  K  A  K  L  D  G  M  Y  E  C  I  L  C  A  C  C  S  T  S  C  P  S  Y  W  W  N  P  E  S  Y  L  G  P  A  A  L  L  H  A  N  R :   W  I  M  D  S  R  D  E  H  T  L  E  R  L  D  A  V  N  D  E  F  K  L  Y  R  C  H  T  I  L  N  C  S  R  A  C  P  K  G  F  N  P  G  K  L  R  T  S  S  A  W  R  W  R  L  E  P  A  L  C  S  V  V  Y  Q  S  I  L  L  T  L  I  L  E  D  Q  *  E  V  V  L  K  I  I  Y  A  Q  I  V  I  C  F  L  R  F  F  F  G  A  R  V  L  P  F  P  E  P  C  V  N  M  G  F  F  C  A  P  C  C  L  I  R  D  E  R  C  I  S  P  E  I  L  Y  *  Q  L  V  *  *  L  K  *  S  K  H  V  I  A  E  S  I  Y  K  F  M  N  *  F  I  I  E  N  N  D  F  Y  K  Y  S  F  E  I  I  P  H  K  N  F  I  N  Y  I  K  H  F  L  Y  </first_frame>
            <second_frame>  E  A  T  C  C  P  S  S  R  F  G  H  Q  I  P  A  G  P  T  S  S  R  F  K  F  T  D  G  I  Q  I  T  Q  G  N  P  S  S  K  N  T  K  L  I  *  R  N  V  A  L  W  S  *  T  P  *  S  K  S  R  M  K  L  T  L  H  Q  P  S  E  D  L  A  E  K  G  S  V  G  P  V  P  *  T  S  T  A  V  M  D  S  L  V  *  Q  R  S  H  R  I  L  Y  R  R  L  R  H  C  H  I  C  L  *  L  R  I  W  *  W  I  *  L  I  F  I  I  S  I  S  L  L  S  L  G  *  R  E  K  H  L  R  Q  R  L  E  R  R  Y  L  R  A  R  A  I  R  L  S  W  M  G  C  T  S  V  F  S  V  L  V  V  V  H  H  A  L  A  T  G  G  I  L  S  L  I  L  V  L  L  H  Y  S  M  P  I   : D  G  S  W  I  A  V  M  N  I  L  W  S  A  W  T  Q  L  M  M  N  S  S  F  I  A  A  T  L  F  *  T  V  L  V  L  A  Q  R  D  L  I  L  A  S  S  E  H  Q  A  P  G  D  G  A  L  S  L  H  S  A  V  *  C  T  S  L  F  C  *  H  *  F  W  R  T  S  R  R  *  F  S  K  *  F  M  H  R  S  *  F  A  F  *  D  F  F  L  V  L  G  C  C  P  S  P  S  P  V  *  I  W  D  S  F  V  H  R  A  A  L  F  E  M  K  G  A  S  H  L  K  Y  C  T  N  N  *  Y  D  S  *  S  E  A  N  M  *  *  Q  R  V  Y  T  N  L  *  T  D  L  S  *  K  I  M  I  S  I  N  I  R  L  K  L  Y  L  I  K  T  S  S  I  I  *  N  I  S  Y  I </second_frame>
            <third_frame>   R  L  L  V  A  R  A  H  A  S  D  T  K  S  Q  Q  V  Q  P  Q  V  V  S  N  L  P  M  E  S  R  *  P  R  E  T  R  A  P  R  I  Q  N  *  S  E  G  M  W  P  Y  G  L  R  R  P  N  Q  N  Q  E  *  S  *  P  F  T  N  L  Q  K  I  L  Q  R  R  D  L  W  V  L  C  H  E  H  R  R  L  *  W  T  R  L  F  D  K  D  L  I  G  F  C  I  D  D  Y  A  T  A  T  Y  V  C  D  *  G  F  G  S  G  Y  D  *  F  L  *  S  V  *  V  Y  *  A  L  A  E  E  K  N  T  C  A  N  A  W  K  G  D  T  S  E  Q  E  R  *  G  *  V  G  W  D  V  R  V  Y  S  L  C  L  L  *  Y  I  M  P  *  L  L  V  E  S  *  V  L  S  W  S  C  C  T  T  P  C  Q  *  :  M  D  H  G  *  P  *  *  T  Y  S  G  A  P  G  R  S  *  *  *  I  Q  A  L  S  L  P  H  Y  F  E  L  F  S  C  L  P  K  G  I  *  S  W  Q  A  Q  N  I  K  R  L  E  M  A  P  *  A  C  T  L  Q  C  S  V  P  V  Y  S  A  N  I  D  F  G  G  P  V  G  G  S  S  Q  N  N  L  C  T  D  R  N  L  L  S  E  I  F  F  W  C  *  G  V  A  L  P  R  A  L  C  E  Y  G  I  L  L  C  T  V  L  P  Y  S  R  *  K  V  H  L  T  *  N  I  V  L  T  I  S  M  I  A  E  V  K  Q  T  C  N  S  R  E  Y  I  Q  I  Y  E  L  I  Y  H  R  K  *  *  F  L  *  I  F  V  *  N  Y  T  S  *  K  L  H  Q  L  Y  K  T  F  L  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0053H21.1" strand="-"/>
                <serials PGL_serial="29" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="140793" stop="140210"/>
                    <exon start="138836" stop="138605"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>813</number_coding_nucleotides>
                  <number_encoded_amino_acids>271</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RGYLLPELTLRTPNPSRSNLKSFQIYRWNPDNPGKPELQEYKIDLKECGPMVLDALIKIKNEVDPSPTFRRSCREGICGSCAMNIDGCNGLACLTKISSDSVSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKTPAPTPGKEIPQSKSDKAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWIMDSRDEHTLERLDAVNDEFKLYRCHTILNCSRACPKGFNPGKLRTSSAWRWRLEPALCSVVYQSILLTLILEDQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="30" PGL_strand="+" PGL_start="141746" PGL_stop="144841"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="141746" e_stop="142038"/>
            <exon e_start="142406" e_stop="142788"/>
            <exon e_start="144092" e_stop="144328"/>
            <exon e_start="144537" e_stop="144841"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.999" e_score="0.997"/>
          <exon-intron don_prob="0.957" acc_prob="0.977" e_score="1.000"/>
          <exon-intron don_prob="0.804" acc_prob="0.999" e_score="0.992"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.997">
            <gDNA_exon_boundary e_start="141746" e_stop="142038" e_length="293"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.999">
            <gDNA_intron_boundary i_start="142039" i_stop="142405" i_length="367"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="142406" e_stop="142788" e_length="383"/>
          </exon>
          <intron i_serial="2" don_prob="0.957" acc_prob="0.977">
            <gDNA_intron_boundary i_start="142789" i_stop="144091" i_length="1303"/>
          </intron>
          <exon e_serial="3" e_score="0.992">
            <gDNA_exon_boundary e_start="144092" e_stop="144328" e_length="237"/>
          </exon>
          <intron i_serial="3" don_prob="0.804" acc_prob="0.999">
            <gDNA_intron_boundary i_start="144329" i_stop="144536" i_length="208"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="144537" e_stop="144841" e_length="305"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="141746" stop="142038"/>
              <exon start="142406" stop="142788"/>
              <exon start="144092" stop="144328"/>
              <exon start="144537" stop="144841"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U574976" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="30" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAAAAAAAAAAAAAATCCTCTTTCACTCTACAGCCAGCAGTCTAAGATGTTAAGCTCCTGTTTTGGGAGCTGCTTTGGTGGGGACGATGGTGATGATCTTTTATGGCATATGGACTTGAAGCCACATGCCACAGGTGAATATTCTGTTGCTGTAGTTCAGGCCAATTCTTTGCTTGAAGATCAAGGTCAAGTTTTTACAACCCCTAGTGCTACTTATGTGGGTGTTTATGATGGTCATGGTGGCCCGCAAGCTTCTCGCTTCATCAACAACAATCTCTTCCCTCAACTACAAA : AGCTGGCTTTGGAAGAAGGAGGATTGTCTGAGGACGTGATCAGGAAAGCATTTGATGCTATTGAGGAGGGATTCTTGCGTTTGGTGAAACAGTCTTGGCTGGATCAACCTCAGATTGCATCTGCAGGGTCTTGTTGTCTATTTGGAGCAATCTCAAAAGATGAATTGTATGTGGCAAATCTTGGGGACTCCAGGGCAGTGCTTGGCAGGAGAGCAGAGACAGGCCAGACGGGTGATTCAGCAGTAGTAGTGGCAGAACGTTTGTCGATAGATCATAATGTTGGGGTTGAGGAGGTTAGGAAGGAGGTAGAGGCACTGCATCCAGATGATTCTCATGTTGTGGTCTACGTTCGAGGGGTTTGGAGAATTAAGGGTATAATTCAG : GTTTCTAGATCAATTGGTGATGTCTATCTGAAGAAACCTGAGTTTAATAGAGATCCTATGTTCATACAATATGGATATCCTATTCCTTTAAAAAGAGCTGTAATGTCAGCAGAGCCCTCCATATTGATCCGAAAGATAAGACCAGAAGACTTATTTTTGATATTTGCATCGGATGGCCTATGGGATCAACTAACCGATGACGAAGCTAAGGATATTGTTTTGAAGAATCCTAGAATT : GGAATAGCAAAACGATTAGTGAGAGCTGCCCTTGAGGGTGCTGCAGAGAAGAAAGAAATGAGATATGAGGACATCAAACGACTAGAGAAGGGGGAAAGGCGGCACGTTCATGATGATATCACAGTTATTGTGATATATTTGGATCACCCTGGAAGGTCCTCAAATTCTGGAATTAACATTGTTAAGGGCACGAATGTCCCTCTTGACATATACTCCTTGAACTCGGGTCATTAAGGAGAGAACATATCTTATGTTTCCCCATGAAAAGTGTCTAATACATGTATACATTATATATACCATTTTGT</gDNA_template>
            <first_frame> K  K  K  K  K  S  S  F  T  L  Q  P  A  V  *  D  V  K  L  L  F  W  E  L  L  W  W  G  R  W  *  *  S  F  M  A  Y  G  L  E  A  T  C  H  R  *  I  F  C  C  C  S  S  G  Q  F  F  A  *  R  S  R  S  S  F  Y  N  P  *  C  Y  L  C  G  C  L  *  W  S  W  W  P  A  S  F  S  L  H  Q  Q  Q  S  L  P  S  T  T  K :   A  G  F  G  R  R  R  I  V  *  G  R  D  Q  E  S  I  *  C  Y  *  G  G  I  L  A  F  G  E  T  V  L  A  G  S  T  S  D  C  I  C  R  V  L  L  S  I  W  S  N  L  K  R  *  I  V  C  G  K  S  W  G  L  Q  G  S  A  W  Q  E  S  R  D  R  P  D  G  *  F  S  S  S  S  G  R  T  F  V  D  R  S  *  C  W  G  *  G  G  *  E  G  G  R  G  T  A  S  R  *  F  S  C  C  G  L  R  S  R  G  L  E  N  *  G  Y  N  S   : G  F  *  I  N  W  *  C  L  S  E  E  T  *  V  *  *  R  S  Y  V  H  T  I  W  I  S  Y  S  F  K  K  S  C  N  V  S  R  A  L  H  I  D  P  K  D  K  T  R  R  L  I  F  D  I  C  I  G  W  P  M  G  S  T  N  R  *  R  S  *  G  Y  C  F  E  E  S  *  N   : W  N  S  K  T  I  S  E  S  C  P  *  G  C  C  R  E  E  R  N  E  I  *  G  H  Q  T  T  R  E  G  G  K  A  A  R  S  *  *  Y  H  S  Y  C  D  I  F  G  S  P  W  K  V  L  K  F  W  N  *  H  C  *  G  H  E  C  P  S  *  H  I  L  L  E  L  G  S  L  R  R  E  H  I  L  C  F  P  M  K  S  V  *  Y  M  Y  T  L  Y  I  P  F  C </first_frame>
            <second_frame>  K  K  K  K  N  P  L  S  L  Y  S  Q  Q  S  K  M  L  S  S  C  F  G  S  C  F  G  G  D  D  G  D  D  L  L  W  H  M  D  L  K  P  H  A  T  G  E  Y  S  V  A  V  V  Q  A  N  S  L  L  E  D  Q  G  Q  V  F  T  T  P  S  A  T  Y  V  G  V  Y  D  G  H  G  G  P  Q  A  S  R  F  I  N  N  N  L  F  P  Q  L  Q   : K  L  A  L  E  E  G  G  L  S  E  D  V  I  R  K  A  F  D  A  I  E  E  G  F  L  R  L  V  K  Q  S  W  L  D  Q  P  Q  I  A  S  A  G  S  C  C  L  F  G  A  I  S  K  D  E  L  Y  V  A  N  L  G  D  S  R  A  V  L  G  R  R  A  E  T  G  Q  T  G  D  S  A  V  V  V  A  E  R  L  S  I  D  H  N  V  G  V  E  E  V  R  K  E  V  E  A  L  H  P  D  D  S  H  V  V  V  Y  V  R  G  V  W  R  I  K  G  I  I  Q  :  V  S  R  S  I  G  D  V  Y  L  K  K  P  E  F  N  R  D  P  M  F  I  Q  Y  G  Y  P  I  P  L  K  R  A  V  M  S  A  E  P  S  I  L  I  R  K  I  R  P  E  D  L  F  L  I  F  A  S  D  G  L  W  D  Q  L  T  D  D  E  A  K  D  I  V  L  K  N  P  R  I  :  G  I  A  K  R  L  V  R  A  A  L  E  G  A  A  E  K  K  E  M  R  Y  E  D  I  K  R  L  E  K  G  E  R  R  H  V  H  D  D  I  T  V  I  V  I  Y  L  D  H  P  G  R  S  S  N  S  G  I  N  I  V  K  G  T  N  V  P  L  D  I  Y  S  L  N  S  G  H  *  G  E  N  I  S  Y  V  S  P  *  K  V  S  N  T  C  I  H  Y  I  Y  H  F   </second_frame>
            <third_frame>   K  K  K  K  I  L  F  H  S  T  A  S  S  L  R  C  *  A  P  V  L  G  A  A  L  V  G  T  M  V  M  I  F  Y  G  I  W  T  *  S  H  M  P  Q  V  N  I  L  L  L  *  F  R  P  I  L  C  L  K  I  K  V  K  F  L  Q  P  L  V  L  L  M  W  V  F  M  M  V  M  V  A  R  K  L  L  A  S  S  T  T  I  S  S  L  N  Y  K  :  S  W  L  W  K  K  E  D  C  L  R  T  *  S  G  K  H  L  M  L  L  R  R  D  S  C  V  W  *  N  S  L  G  W  I  N  L  R  L  H  L  Q  G  L  V  V  Y  L  E  Q  S  Q  K  M  N  C  M  W  Q  I  L  G  T  P  G  Q  C  L  A  G  E  Q  R  Q  A  R  R  V  I  Q  Q  *  *  W  Q  N  V  C  R  *  I  I  M  L  G  L  R  R  L  G  R  R  *  R  H  C  I  Q  M  I  L  M  L  W  S  T  F  E  G  F  G  E  L  R  V  *  F  R :   F  L  D  Q  L  V  M  S  I  *  R  N  L  S  L  I  E  I  L  C  S  Y  N  M  D  I  L  F  L  *  K  E  L  *  C  Q  Q  S  P  P  Y  *  S  E  R  *  D  Q  K  T  Y  F  *  Y  L  H  R  M  A  Y  G  I  N  *  P  M  T  K  L  R  I  L  F  *  R  I  L  E  L :   E  *  Q  N  D  *  *  E  L  P  L  R  V  L  Q  R  R  K  K  *  D  M  R  T  S  N  D  *  R  R  G  K  G  G  T  F  M  M  I  S  Q  L  L  *  Y  I  W  I  T  L  E  G  P  Q  I  L  E  L  T  L  L  R  A  R  M  S  L  L  T  Y  T  P  *  T  R  V  I  K  E  R  T  Y  L  M  F  P  H  E  K  C  L  I  H  V  Y  I  I  Y  T  I  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0053H21.1" strand="+"/>
                <serials PGL_serial="30" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="141747" stop="142038"/>
                    <exon start="142406" stop="142788"/>
                    <exon start="144092" stop="144328"/>
                    <exon start="144537" stop="144770"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1143</number_coding_nucleotides>
                  <number_encoded_amino_acids>381</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KKKKNPLSLYSQQSKMLSSCFGSCFGGDDGDDLLWHMDLKPHATGEYSVAVVQANSLLEDQGQVFTTPSATYVGVYDGHGGPQASRFINNNLFPQLQKLALEEGGLSEDVIRKAFDAIEEGFLRLVKQSWLDQPQIASAGSCCLFGAISKDELYVANLGDSRAVLGRRAETGQTGDSAVVVAERLSIDHNVGVEEVRKEVEALHPDDSHVVVYVRGVWRIKGIIQVSRSIGDVYLKKPEFNRDPMFIQYGYPIPLKRAVMSAEPSILIRKIRPEDLFLIFASDGLWDQLTDDEAKDIVLKNPRIGIAKRLVRAALEGAAEKKEMRYEDIKRLEKGERRHVHDDITVIVIYLDHPGRSSNSGINIVKGTNVPLDIYSLNSGH*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 71 chains have been computed
$ 
$ memory statistics:
$ 80976 bytes spliced alignments in total
$ 38 spliced alignments have been stored
$ 2130 bytes was the average size of a spliced alignment
$ 42376 bytes predicted gene locations in total
$ 30 predicted gene locations have been stored
$ 1412 bytes was the average size of a predicted gene location
$ 1 megabytes was the average size of the backtrace matrix
$ 82 backtrace matrices have been allocated
$ 
$ date finished: 2009-12-01 11:05:16
-->
