<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-07-29 04:37:53"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/GenomeThreader_SGN_E_tomato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E236168" ref_strand="+" ref_description="SGN-E236168 [cLED-20-C11]">
      <seq>tgacttttacctttgctgcctcttcttgtttttttcatccatttctgcttctccttcttcctagtcgatctctgcacgaatccgaaaaaaccccttttttttggaaatagctagctatgactcttggttcaggaggatctagtgctgtggtccctcggaatttcagattacttgaggaacttgaacgcggtgaaaagg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0101H16.1" temp_strand="-" temp_description="C02SLe0101H16.1  AC215444.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0101H16 sequenced_by:kribb upload_account_name:korea">
        <position start="4394" stop="294"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="4094" g_stop="3945" g_length="150"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="150" r_length="150" r_score="0.987"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="3944" i_stop="642" i_length="3303">
            <donor d_prob="0.979" d_score="0.96"/>
            <acceptor a_prob="0.784" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="641" g_stop="594" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="151" r_stop="198" r_length="48" r_score="0.979"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0101H16.1" gen_strand="-" ref_id="SGN-E236168" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>198</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0101H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E236168" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="4094" e_stop="3945"/>
          <exon e_start="641" e_stop="594"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGACTTTTACCTTTGCTGCCTCTTCTTGTTTTTTTCATCCATTTCTGCTTCTCCTTCTTCCTAGTCGATCTCTGCACGAATCCGAAAAAACCCCTTTTTTTTGGAAATAGTTAGCTATGACTCTTGGTTCAGGAGGATCTAGTGTTGTGGGTGAGTCAAATTTTACATCCCCAAATCTCTTGTTGTTTTATTTTGAGTTTTTTTGTGTCAAATCTGATCATGGGTTGTTTAAATTTCACATCTTTATTGCATGGTTTATGTTTATATGAGTGTTATTCTTGTTATCAAAGATTAGTACTTTGAAATCTTGTTTTTTTAATTATGTGGTTTTTTTTTTTTTACTTTTTGGTCTTTATTGATTGATGTGTAGTGAATTTAGTAATTGTAGTGAGTGGATTGAATTATGAAGTATTGTAAAGAGAGAGGAAGATTTTAGGATTTTAAGTAAGGACAACTGTGGAGGGGAGTTTTGGTGTAACTGGTAAAGTTGTGGACATAGCCTCTTGTAGTAATGCAGGGTTAGTCCGATAGACCCTTTTAGTTGGGCTGGCCTTAAGCAAGGACACCGTGGAAGGGGAGCTTTGGTGTAACTGGTAAAGTTGTTGTCATGTGATCAAGAGGTCATAGGTTTGAATTGTGGACATAGCCTCTTGCAGTAATGCAGGGTAAGGCCTCGTAGGATAGACCATTGTGGTTGGGCTGTCCTTAAGCAAGTACAACGGGGAAGGGGAGCTTTGGTGTAACTGGTAAAGTTTTTGTCATGTGATCAAGAGGTCGTAGGCTTTACTTGTGGACATGACCTCTTGCAGCAATGCACGGTAAGGCCGTGTATGATAGACCCTTGCAGTTGGGCTGGCCTTAAGCAAGGACAACTGTGAAGAGGAGCTTTGGTGTAACTGGTAAAGTTGTTGTCATGTGATCAAGAGGTCACAGGTTTGCTCTGTTGATAGACCCTTGTGGTCGGAAGGGCCTTAACTAAGGACAACTGTGTCCGCTTCCTCTTTATGTATATATATCTTCTTTGTTTGTGTATAATATATAAACAGGTTGACCTAAAGGCAGTGTGTTTTGCATTTGTTGTTGCTTGCTTTTATGTTCACTGGCAATTAGCATGAAAGTTGTCATCAGTTGAATTTTGCGTGAGGTATTGGTAAAAGTTAGTCTTTTTCCTGGTTGGGTAGCTCTATTTGGTGTGGTTGTACATCTTTAATACTGGAATGGATGTTATTGTAAATAGTGGTCAGTAAACTTATCATAGATTTCCAGATCTTACAATGTTCAATTTTGAATTGGTCTTTGGACAATGATAGGGATTATATTTGTGCCAGTTTTTTCAGGTCACTGTTAAAAATCCTTTATCTTAACAATATGAAGCTAAACTTAATGAGTTTATGCATGTTCTGTCGTATACGAGTATTTGAATTATCCTCGTGCTTGCTTGATAAACAAGTCAATGTCTGATTGGTATTAAGGATATATTATTTGCTCCTCCTTCAGAGCAGAACTTAAGTTCCCCCTCCCCACTTTGAGGGAGTGTGAGGGTTGAGGACATTCATAAGAATTTGTTATTTCACAAGCATAGTGGATTTATTTGTCTGTTGTGCATGTTATCTTTTCCAGAGCTTAACATGGTAATGATCCTACGTATACTGTTCTATCCTGTTTCCTACCAATTAGTCGCGTTTTAGTTGTAGCTGATACAATTTCAGTTTGTTATGTTGCATCAGCCAAATTGTGTACTTTGATTGTTATTTAGGAAAACGAGGAAGTCGACTGTGTAAACAACTACACATATTTGTTGACCTGATTTCCTTATAAATAAAAAATTCTCTGGCTGTTCTCCATGCTAATGATTGTTGGATGTACTATCATTAGAGCTCATAAACTGTGGAAATGAAGTCTCAGCTCAACACCTAAAATCCGTCTAGATTTTTATGCTTTACACTTTACTTGAGAGGAAAAATCTGATAATTATTGATTCTTTTGGCATGATAATATTTTTAAGAAGGGGTTGCCTATTTGAGCCCCACCATCCCAAGTTGATTTATTATGTTCTTCAATCAATGCCACAACAAGGATACATCTATGTCAGAAAGGAAGTGAGAATAGAAAATTAAACTAATGTTTTTTTACTTTACTTAGAGGGGGCAAAGCTAAGGAAAGGTCTTTGCAGTGATATTCCACCAAGACACTGTCACTTTACATAAATCGGAAAGTTTGGAGATCAGCCTTCCAAAAATCCAGCAACTATTATACAAAGTGGAATATTTTCTTTACATAAAAAATTACAAATTGAACAGAAGAGAGCTTTAACTATCCATAGTAGACTTTCAGCTCCTTCAGAAGTTCTATTAATCCTTTATTATCATAAACAAAAAAGTTGAGTTATTTCTTTCTTCTTTTTGTCCATTTTCTACGTCCAACTTGTGGTAGCTTCTATCACTGTATCTGGAGGGTCCCAAGTTATATCAACAACAACAAATCCAGTGTAGGGGAGGGTGGTGTGTATGCAAACTTACCCTTGACTTGTGATGGTAGAGAGTTTGTTCCCAATAGACCCCCGACTCAAGTTTAGTATATAAAACAACGAGTACGTAAAGAAGATATAAAGAAGAAGAGAACAATAGTGACAACAAATAAAATAGTAACTGAAGAAAAAGAAACAATAGGTCATACTAATCCAAAGAATAATATAGTAGGAGAGTAATACAAACAAAGCTTAAAAAGGAACTAGACACGCTCAACTACCTACTAACCTTCTATCCTAGAGACTTTCATGTCTTTCTATCCAGCGTCATGTCCTTGGTAAGCTGCAAATGTGTCATGTGCTGTCTAATCATCTCCCTCGAAGATTTCTTCTGTCTACCTCTACCTCTCCTTATACCTACTATAGTCAACTCTCATACCTCCTCACTGGGGCATCAATGCATCTTCTCCTCACATGCCCAAACTATCATAGCATTGCCTCCCTTATCTTGTGCCAATTCTTGGCGGACCAACACTCCACCCCATACAACATAGTGGTTTGACCGTCATGTTATACCTTAAGGCATGGTGACACATTCTTATCTTACAAGAATGGGGTGATAAGAATATACCAAGGACTATAACTTTATTGCAGAATGACATTGCAATGTTCTTGTGGGCACCATCAGAACTTCATGCAGATTTGGTTCTTCTTTTATATTCATGCATGGAAAACTGTTGAAACTGTCTCATCTCTCTTACTTCCTCCTCAAAGAAAGAAAGCGTCTTCTCGAGTTCTCCGTTCTTTCACCATTTTCCTGTCGTATCCCTTGTGAATAAACACTTCGCTAAAATGTTAGATATATGTTTTTTGTACTGTCATTTAGCCCTTCACATCTACTTGGGAGTTGGAGCCATCTGCAACGTTATGGATTCTTGGTTTACCTTTTGTGAATCTCCGCTTACCAGAATTTTAATTCTTTGCAGTCCCTCGGAATTTCAGATTACTTGAGGAACTTGAACGTGGTGAAAAGG</genome_strand>
        <mrna_strand>TGACTTTTACCTTTGCTGCCTCTTCTTGTTTTTTTCATCCATTTCTGCTTCTCCTTCTTCCTAGTCGATCTCTGCACGAATCCGAAAAAACCCCTTTTTTTTGGAAATAGCTAGCTATGACTCTTGGTTCAGGAGGATCTAGTGCTGTGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCCTCGGAATTTCAGATTACTTGAGGAACTTGAACGCGGTGAAAAGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E229874" ref_strand="+" ref_description="SGN-E229874 [cLEL-33-C21](-)">
      <seq>aatctgaaattccgagggaccacaacactagatcctcctgaaccaagagtcatagctaactatttccaaaaaaaagggggttttttgggattcgtgcagagatcgactaggaagaaggagaagcagaaatggatgaaaaaaacaagaagaggcagcaaaggtaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0101H16.1" temp_strand="+" temp_description="C02SLe0101H16.1  AC215444.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0101H16 sequenced_by:kribb upload_account_name:korea">
        <position start="323" stop="4390"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="3926" g_stop="4090" g_length="165"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="166" r_length="166" r_score="0.915"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0101H16.1" gen_strand="+" ref_id="SGN-E229874" ref_strand="+">
        <total_alignment_score>0.915</total_alignment_score>
        <cumulative_length_of_scored_exons>165</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0101H16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E229874" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="3926" e_stop="4090"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATGTAAAATTTGACTCACCCACAACACTAGATCCTCCTGAACCAAGAGTCATAGCTAACTATTTCCAAAAAAAA-GGGGTTTTTTCGGATTCGTGCAGAGATCGACTAGGAAGAAGGAGAAGCAGAAATGGATGAAAAAAACAAGAAGAGGCAGCAAAGGTAAAA</genome_strand>
        <mrna_strand>AATCTGAAATTCCGAGGGACCACAACACTAGATCCTCCTGAACCAAGAGTCATAGCTAACTATTTCCAAAAAAAAGGGGGTTTTTTGGGATTCGTGCAGAGATCGACTAGGAAGAAGGAGAAGCAGAAATGGATGAAAAAAACAAGAAGAGGCAGCAAAGGTAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E342196" ref_strand="+" ref_description="SGN-E342196 [cTOF-10-H6]">
      <seq>aatacaagtataactaattgtttatcttagtggtggttccgtttatatctcctccgtactccgccgtgtcgtttcgactacaaaaacccctcacttccgatctcaagaatgagcaggagaaatggaaatggttcaaggcttgacctaaaattgaatttgtcaccaccacctagagtgaaccacgtggggccacaagtggagtcgccgacaaggtcgctgacaatgtccccgacgaattcatgtgtatcatctgataattcgtcggggggacaacgtggttccaacagccccgaagcggtgacttcgatgctgttggttggttgtcaaaggtgtctaatgtatgttatggtatcggaagttaatgatccaccaaggtgcccaaaatgcaagagtacttgtttgcttgaagttatctatgagaaaaaataagaaggtcaatcatcagtcaagatcaaatccatcaaattctcgtattactaggtttatcaatatcaccgccctgcccccaccttgaaaaaaaatatatacatgaaaagttaaaacttttggtattgctcttttcgactttctataaatagcactatatgagctccattttgtctcttttaaaaattatgaaaaaaaggaattttggagcttctatagggctatgtattattttatttttatttttatgggttaattaggtttatttctag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0101H16.1" temp_strand="-" temp_description="C02SLe0101H16.1  AC215444.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0101H16 sequenced_by:kribb upload_account_name:korea">
        <position start="10172" stop="8570"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="9872" g_stop="9766" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="107" r_length="107" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="9765" i_stop="9461" i_length="305">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="9460" g_stop="8870" g_length="591"/>
          <reference_exon_boundary r_type="cDNA" r_start="108" r_stop="698" r_length="591" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0101H16.1" gen_strand="-" ref_id="SGN-E342196" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>698</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0101H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E342196" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="9872" e_stop="9766"/>
          <exon e_start="9460" e_stop="8870"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATACAAGTATAACTAATTGTTTATCTTAGTGGTGGTTCCGTTTATATCTCCTCCGTACTCCGCCGTGTCGTTTCGACTACAAAAACCCCTCACTTCCGATCTCAAGGTATTAAAAAAATCTCGTTGTTCTTTTCGATTTCTCAATTTTTAAAATTTTTTACGTAGTCAGACATGTTATAACAAGTTACTTATTATGTTCTTCATATTCGTTATAAAAAAATAATAATTTATAATTATCTTTTAAATGATTGTGATATCATATACTGTTGTATTCATTTTGGGTTTTTGATTTGAGAAATTTACATTATTGATTTGATTTTTATTATTTTTTAAGTTACTTTTTGAATGACTTGATATCGTGAAAGTTCTTTATTTGATTTATTTTTTATTTTTTATTTTGTTTGATTTTAGAATGAGCAGGAGAAATGGAAATGGTTCAAGGCTTGACCTAAAATTGAATTTGTCACCACCACCTAGAGTGAACCACGTGGGGCCACAAGTGGAGTCGCCGACAAGGTCGCTGACAATGTCCCCGACGAATTCATGTGTATCATCTGATAATTCGTCGGGGGGACAACGTGGTTCCAACAGCCCCGAAGCGGTGACTTCGATGCTGTTGGTTGGTTGTCAAAGGTGTCTAATGTATGTTATGGTATCGGAAGTTAATGATCCACCAAGGTGCCCAAAATGCAAGAGTACTTGTTTGCTTGAAGTTATCTATGAGAAAAAATAAGAAGGTCAATCATCAGTCAAGATCAAATCCATCAAATTCTCGTATTACTAGGTTTATCAATATCACCGCCCTGCCCCCACCTTGAAAAAAAATATATACATGAAAAGTTAAAACTTTTGGTATTGCTCTTTTCGACTTTCTATAAATAGCACTATATGAGCTCCATTTTGTCTCTTTTAAAAATTATGAAAAAAAGGAATTTTGGAGCTTCTATAGTGCTATGTATTATTTTATTTTTATTTTTATGGGTTAATTAGGTTTATTTCTAG</genome_strand>
        <mrna_strand>AATACAAGTATAACTAATTGTTTATCTTAGTGGTGGTTCCGTTTATATCTCCTCCGTACTCCGCCGTGTCGTTTCGACTACAAAAACCCCTCACTTCCGATCTCAAG.................................................................................................................................................................................................................................................................................................................AATGAGCAGGAGAAATGGAAATGGTTCAAGGCTTGACCTAAAATTGAATTTGTCACCACCACCTAGAGTGAACCACGTGGGGCCACAAGTGGAGTCGCCGACAAGGTCGCTGACAATGTCCCCGACGAATTCATGTGTATCATCTGATAATTCGTCGGGGGGACAACGTGGTTCCAACAGCCCCGAAGCGGTGACTTCGATGCTGTTGGTTGGTTGTCAAAGGTGTCTAATGTATGTTATGGTATCGGAAGTTAATGATCCACCAAGGTGCCCAAAATGCAAGAGTACTTGTTTGCTTGAAGTTATCTATGAGAAAAAATAAGAAGGTCAATCATCAGTCAAGATCAAATCCATCAAATTCTCGTATTACTAGGTTTATCAATATCACCGCCCTGCCCCCACCTTGAAAAAAAATATATACATGAAAAGTTAAAACTTTTGGTATTGCTCTTTTCGACTTTCTATAAATAGCACTATATGAGCTCCATTTTGTCTCTTTTAAAAATTATGAAAAAAAGGAATTTTGGAGCTTCTATAGGGCTATGTATTATTTTATTTTTATTTTTATGGGTTAATTAGGTTTATTTCTAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E708135" ref_strand="+" ref_description="SGN-E708135 [FA34DG08]">
      <seq>ccctctctccccctctcttaacttctctcactaaaagtctaacttgctccaacccctctccctataatttaattaagctttaaaagcaatctcctctctaccttcaatagttcccattatataatatggccttttacaagttcaaaaatcatcatctaggaccacaaaatacaagtataactaattgtttatcttagtggtggttccgtttatatctcctccgtactccgccgtgtcgtttcgactacaaaaacccctcacttccgatctcaagaatgagcaggagaaatggaaatggttcaaggcttgacctaaaattgaatttgtcaccaccacctagagtgaaccacgtggggccacaagtggagtcgccgacaaggtcgctgacaatgtccccgacgaattcatgtgtatcatctgataattcgtcggggggacaacgtggttccaacagccccgaagcggtgacttcgatgctgttggttggttgtcaaaggtgtctaatgtatgttatggtatcggaagttaatgatccaccaaggtgcccaaaatgcaagagtacttgtttgcttgaagttatctatgagaaaaaataagaaggtcaatcatcagtcaagatcaaatccatcaaattctcgtattactaggtttatcaatatcaccgccctgcccccaccttgaaaaaaaatatatacatgaaaagttaaaacttttggtattgctcttttcgactttctataaatagcactatatgagctccattttgtctcttttaaaaattatgaaaaaaaggaattttggagcttctatagtgctatgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0101H16.1" temp_strand="-" temp_description="C02SLe0101H16.1  AC215444.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0101H16 sequenced_by:kribb upload_account_name:korea">
        <position start="10339" stop="8615"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="10039" g_stop="9766" g_length="274"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="274" r_length="274" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="9765" i_stop="9461" i_length="305">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="9460" g_stop="8915" g_length="546"/>
          <reference_exon_boundary r_type="cDNA" r_start="275" r_stop="820" r_length="546" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0101H16.1" gen_strand="-" ref_id="SGN-E708135" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>820</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0101H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E708135" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="10039" e_stop="9766"/>
          <exon e_start="9460" e_stop="8915"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCCCCTCTCCCCCTCTCTTAACTTCTCTCACTAAAAGTCTAACTTGCTCCAACCCCTCTCCCTATAATTTAATTAAGCTTTAAAAGCAATCTCCTCTCTACCTTCAATAGTTCCCATTATATAATATGGCCTTTTACAAGTTCAAAAATCATCATCTAGGACCACAAAATACAAGTATAACTAATTGTTTATCTTAGTGGTGGTTCCGTTTATATCTCCTCCGTACTCCGCCGTGTCGTTTCGACTACAAAAACCCCTCACTTCCGATCTCAAGGTATTAAAAAAATCTCGTTGTTCTTTTCGATTTCTCAATTTTTAAAATTTTTTACGTAGTCAGACATGTTATAACAAGTTACTTATTATGTTCTTCATATTCGTTATAAAAAAATAATAATTTATAATTATCTTTTAAATGATTGTGATATCATATACTGTTGTATTCATTTTGGGTTTTTGATTTGAGAAATTTACATTATTGATTTGATTTTTATTATTTTTTAAGTTACTTTTTGAATGACTTGATATCGTGAAAGTTCTTTATTTGATTTATTTTTTATTTTTTATTTTGTTTGATTTTAGAATGAGCAGGAGAAATGGAAATGGTTCAAGGCTTGACCTAAAATTGAATTTGTCACCACCACCTAGAGTGAACCACGTGGGGCCACAAGTGGAGTCGCCGACAAGGTCGCTGACAATGTCCCCGACGAATTCATGTGTATCATCTGATAATTCGTCGGGGGGACAACGTGGTTCCAACAGCCCCGAAGCGGTGACTTCGATGCTGTTGGTTGGTTGTCAAAGGTGTCTAATGTATGTTATGGTATCGGAAGTTAATGATCCACCAAGGTGCCCAAAATGCAAGAGTACTTGTTTGCTTGAAGTTATCTATGAGAAAAAATAAGAAGGTCAATCATCAGTCAAGATCAAATCCATCAAATTCTCGTATTACTAGGTTTATCAATATCACCGCCCTGCCCCCACCTTGAAAAAAAATATATACATGAAAAGTTAAAACTTTTGGTATTGCTCTTTTCGACTTTCTATAAATAGCACTATATGAGCTCCATTTTGTCTCTTTTAAAAATTATGAAAAAAAGGAATTTTGGAGCTTCTATAGTGCTATGT</genome_strand>
        <mrna_strand>CCCTCTCTCCCCCTCTCTTAACTTCTCTCACTAAAAGTCTAACTTGCTCCAACCCCTCTCCCTATAATTTAATTAAGCTTTAAAAGCAATCTCCTCTCTACCTTCAATAGTTCCCATTATATAATATGGCCTTTTACAAGTTCAAAAATCATCATCTAGGACCACAAAATACAAGTATAACTAATTGTTTATCTTAGTGGTGGTTCCGTTTATATCTCCTCCGTACTCCGCCGTGTCGTTTCGACTACAAAAACCCCTCACTTCCGATCTCAAG.................................................................................................................................................................................................................................................................................................................AATGAGCAGGAGAAATGGAAATGGTTCAAGGCTTGACCTAAAATTGAATTTGTCACCACCACCTAGAGTGAACCACGTGGGGCCACAAGTGGAGTCGCCGACAAGGTCGCTGACAATGTCCCCGACGAATTCATGTGTATCATCTGATAATTCGTCGGGGGGACAACGTGGTTCCAACAGCCCCGAAGCGGTGACTTCGATGCTGTTGGTTGGTTGTCAAAGGTGTCTAATGTATGTTATGGTATCGGAAGTTAATGATCCACCAAGGTGCCCAAAATGCAAGAGTACTTGTTTGCTTGAAGTTATCTATGAGAAAAAATAAGAAGGTCAATCATCAGTCAAGATCAAATCCATCAAATTCTCGTATTACTAGGTTTATCAATATCACCGCCCTGCCCCCACCTTGAAAAAAAATATATACATGAAAAGTTAAAACTTTTGGTATTGCTCTTTTCGACTTTCTATAAATAGCACTATATGAGCTCCATTTTGTCTCTTTTAAAAATTATGAAAAAAAGGAATTTTGGAGCTTCTATAGTGCTATGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E344502" ref_strand="+" ref_description="SGN-E344502 [cTOF-14-N5]">
      <seq>aaatacaagtataactaattgtttatcttagtggtggttccgtttatatctcctccgtactccgccgtgtcgtttcgactacaaaaacccctcacttccgatctcaagaatgagcaggagaaatggaaatggttcaaggcttgacctaaaattgaatttgtcaccaccacctagagtgaaccacgtggggccacaagtggagtcgccgacaaggtcgctgacaatgtccccgacgaattcatgtgtatcatctgataattcgtcggggggacaacgtggttccaacagccccgaagcggtgacttcgatgctgttggttggttgtcaaaggtgtctaatgtatgttatggtatcggaagttaatgatccaccaaggtgcccaaaatgcaagagtacttgtttgcttgaagttatctatgagaaaaaataagaaggtcaatcatcagtcaagatcaaatccatcaaattctcgtattactaggtttatcaatatcaccgccctgcccccaccttgaaaaaaaatatatacatgaaaagttaaaacttttggtattgctcttttcgactttctataaatagcactatatgagctccattttgtctcttttaaaaattatgaaaaaaaagga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0101H16.1" temp_strand="-" temp_description="C02SLe0101H16.1  AC215444.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0101H16 sequenced_by:kribb upload_account_name:korea">
        <position start="10173" stop="8641"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="9873" g_stop="9766" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="108" r_length="108" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="9765" i_stop="9461" i_length="305">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="9460" g_stop="8940" g_length="521"/>
          <reference_exon_boundary r_type="cDNA" r_start="109" r_stop="629" r_length="521" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0101H16.1" gen_strand="-" ref_id="SGN-E344502" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>629</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0101H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E344502" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="9873" e_stop="9766"/>
          <exon e_start="9460" e_stop="8940"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAATACAAGTATAACTAATTGTTTATCTTAGTGGTGGTTCCGTTTATATCTCCTCCGTACTCCGCCGTGTCGTTTCGACTACAAAAACCCCTCACTTCCGATCTCAAGGTATTAAAAAAATCTCGTTGTTCTTTTCGATTTCTCAATTTTTAAAATTTTTTACGTAGTCAGACATGTTATAACAAGTTACTTATTATGTTCTTCATATTCGTTATAAAAAAATAATAATTTATAATTATCTTTTAAATGATTGTGATATCATATACTGTTGTATTCATTTTGGGTTTTTGATTTGAGAAATTTACATTATTGATTTGATTTTTATTATTTTTTAAGTTACTTTTTGAATGACTTGATATCGTGAAAGTTCTTTATTTGATTTATTTTTTATTTTTTATTTTGTTTGATTTTAGAATGAGCAGGAGAAATGGAAATGGTTCAAGGCTTGACCTAAAATTGAATTTGTCACCACCACCTAGAGTGAACCACGTGGGGCCACAAGTGGAGTCGCCGACAAGGTCGCTGACAATGTCCCCGACGAATTCATGTGTATCATCTGATAATTCGTCGGGGGGACAACGTGGTTCCAACAGCCCCGAAGCGGTGACTTCGATGCTGTTGGTTGGTTGTCAAAGGTGTCTAATGTATGTTATGGTATCGGAAGTTAATGATCCACCAAGGTGCCCAAAATGCAAGAGTACTTGTTTGCTTGAAGTTATCTATGAGAAAAAATAAGAAGGTCAATCATCAGTCAAGATCAAATCCATCAAATTCTCGTATTACTAGGTTTATCAATATCACCGCCCTGCCCCCACCTTGAAAAAAAATATATACATGAAAAGTTAAAACTTTTGGTATTGCTCTTTTCGACTTTCTATAAATAGCACTATATGAGCTCCATTTTGTCTCTTTTAAAAATTATGAAAAAAAGGAA</genome_strand>
        <mrna_strand>AAATACAAGTATAACTAATTGTTTATCTTAGTGGTGGTTCCGTTTATATCTCCTCCGTACTCCGCCGTGTCGTTTCGACTACAAAAACCCCTCACTTCCGATCTCAAG.................................................................................................................................................................................................................................................................................................................AATGAGCAGGAGAAATGGAAATGGTTCAAGGCTTGACCTAAAATTGAATTTGTCACCACCACCTAGAGTGAACCACGTGGGGCCACAAGTGGAGTCGCCGACAAGGTCGCTGACAATGTCCCCGACGAATTCATGTGTATCATCTGATAATTCGTCGGGGGGACAACGTGGTTCCAACAGCCCCGAAGCGGTGACTTCGATGCTGTTGGTTGGTTGTCAAAGGTGTCTAATGTATGTTATGGTATCGGAAGTTAATGATCCACCAAGGTGCCCAAAATGCAAGAGTACTTGTTTGCTTGAAGTTATCTATGAGAAAAAATAAGAAGGTCAATCATCAGTCAAGATCAAATCCATCAAATTCTCGTATTACTAGGTTTATCAATATCACCGCCCTGCCCCCACCTTGAAAAAAAATATATACATGAAAAGTTAAAACTTTTGGTATTGCTCTTTTCGACTTTCTATAAATAGCACTATATGAGCTCCATTTTGTCTCTTTTAAAAATTATGAAAAAAAAGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E243838" ref_strand="+" ref_description="SGN-E243838 [cLED-35-E21]">
      <seq>tcgactacaaaaacccctcacttccgatctcaagaatgagcaggagaaatggaaatggttcaaggcttgacctaaaattgaatttgtcaccaccacctagagtgaaccacgtggggccacaagtggagtcgccgacaaggtcgctgacaatgtccccgacgaattcatgtgtatcatctgataattcgtcggggggacaacgtggttccaacagccccgaagcggtgacttcgatgctgttggttggttgtcaaaggtgtctaatgtatgttatggtatcggaagttaatgatccaccaaggtgcccaaaatgcaagagtacttgtttgcttgaagttatctatgagaaaaaataagaaggtcaatcatcagtcaagatcaaatccatcaaattctcgtattactaggtttatcaatatcaccgccctgcccccaccttgaaaaaaaatatatacatgaaaagttaaaacttttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0101H16.1" temp_strand="-" temp_description="C02SLe0101H16.1  AC215444.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0101H16 sequenced_by:kribb upload_account_name:korea">
        <position start="10099" stop="8720"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="9799" g_stop="9766" g_length="34"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="34" r_length="34" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="9765" i_stop="9461" i_length="305">
            <donor d_prob="1.000" d_score="0.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="9460" g_stop="9020" g_length="441"/>
          <reference_exon_boundary r_type="cDNA" r_start="35" r_stop="475" r_length="441" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0101H16.1" gen_strand="-" ref_id="SGN-E243838" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>475</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0101H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E243838" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="9799" e_stop="9766"/>
          <exon e_start="9460" e_stop="9020"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGACTACAAAAACCCCTCACTTCCGATCTCAAGGTATTAAAAAAATCTCGTTGTTCTTTTCGATTTCTCAATTTTTAAAATTTTTTACGTAGTCAGACATGTTATAACAAGTTACTTATTATGTTCTTCATATTCGTTATAAAAAAATAATAATTTATAATTATCTTTTAAATGATTGTGATATCATATACTGTTGTATTCATTTTGGGTTTTTGATTTGAGAAATTTACATTATTGATTTGATTTTTATTATTTTTTAAGTTACTTTTTGAATGACTTGATATCGTGAAAGTTCTTTATTTGATTTATTTTTTATTTTTTATTTTGTTTGATTTTAGAATGAGCAGGAGAAATGGAAATGGTTCAAGGCTTGACCTAAAATTGAATTTGTCACCACCACCTAGAGTGAACCACGTGGGGCCACAAGTGGAGTCGCCGACAAGGTCGCTGACAATGTCCCCGACGAATTCATGTGTATCATCTGATAATTCGTCGGGGGGACAACGTGGTTCCAACAGCCCCGAAGCGGTGACTTCGATGCTGTTGGTTGGTTGTCAAAGGTGTCTAATGTATGTTATGGTATCGGAAGTTAATGATCCACCAAGGTGCCCAAAATGCAAGAGTACTTGTTTGCTTGAAGTTATCTATGAGAAAAAATAAGAAGGTCAATCATCAGTCAAGATCAAATCCATCAAATTCTCGTATTACTAGGTTTATCAATATCACCGCCCTGCCCCCACCTTGAAAAAAAATATATACATGAAAAGTTAAAACTTTTG</genome_strand>
        <mrna_strand>TCGACTACAAAAACCCCTCACTTCCGATCTCAAG.................................................................................................................................................................................................................................................................................................................AATGAGCAGGAGAAATGGAAATGGTTCAAGGCTTGACCTAAAATTGAATTTGTCACCACCACCTAGAGTGAACCACGTGGGGCCACAAGTGGAGTCGCCGACAAGGTCGCTGACAATGTCCCCGACGAATTCATGTGTATCATCTGATAATTCGTCGGGGGGACAACGTGGTTCCAACAGCCCCGAAGCGGTGACTTCGATGCTGTTGGTTGGTTGTCAAAGGTGTCTAATGTATGTTATGGTATCGGAAGTTAATGATCCACCAAGGTGCCCAAAATGCAAGAGTACTTGTTTGCTTGAAGTTATCTATGAGAAAAAATAAGAAGGTCAATCATCAGTCAAGATCAAATCCATCAAATTCTCGTATTACTAGGTTTATCAATATCACCGCCCTGCCCCCACCTTGAAAAAAAATATATACATGAAAAGTTAAAACTTTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E242359" ref_strand="-" ref_description="SGN-E242359 [cLEE-3-K21]">
      <seq>agtatgtattaagcaatatcataaaattaactaatatccttagcatgcagcatttgcaattaccataacccttggttgcatcaccaagcacatcaatgaggactcacacctcctcatcatacttatttgggaatttagttcattggattgcatatattaacatatttcaagattcatcatatttattcccctcgtgtccttacgtgacactccactcctcaatatactatcctggcaccggaacgtggcacccgatccatattctatcctggtgtcagaacgtgacacccgatccatattctatcctggtgtcggaacgtgacacccgatccatattctatcctggtaccggaacgtggcacccgatccatattctatcctggtgtcggaacgtgacacccgatccatattctatcctggtaccggaacgtggcacccgatcccctaatctcaccactttcgttcatcaagccttcttttataccaaggcatcattattaacaaagtagattagg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0101H16.1" temp_strand="-" temp_description="C02SLe0101H16.1  AC215444.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0101H16 sequenced_by:kribb upload_account_name:korea">
        <position start="20127" stop="12833"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19827" g_stop="19594" g_length="234"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="234" r_length="234" r_score="0.940"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19593" i_stop="19480" i_length="114">
            <donor d_prob="0.000" d_score="0.94"/>
            <acceptor a_prob="0.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="19479" g_stop="19322" g_length="158"/>
          <reference_exon_boundary r_type="cDNA" r_start="235" r_stop="392" r_length="158" r_score="0.981"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19321" i_stop="13340" i_length="5982">
            <donor d_prob="0.711" d_score="0.98"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="13339" g_stop="13289" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="393" r_stop="443" r_length="51" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="13288" i_stop="13204" i_length="85">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.84"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="13203" g_stop="13131" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="444" r_stop="515" r_length="72" r_score="0.808"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0101H16.1" gen_strand="-" ref_id="SGN-E242359" ref_strand="-">
        <total_alignment_score>0.940</total_alignment_score>
        <cumulative_length_of_scored_exons>516</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0101H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E242359" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="19827" e_stop="19594"/>
          <exon e_start="19479" e_stop="19322"/>
          <exon e_start="13339" e_stop="13289"/>
          <exon e_start="13203" e_stop="13131"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTATGTATTAAGCAATATCATAAAATCAACTAATATCCTTAGCATGCAGCATTTACAGTTACCATAACCCTTGGTTACAACACCAAGCACATCAATGAGGACTCACACCTCCTCATCATACTCATTTGGGAATTTAGTTCATTAGATTGGATATTTTAACATATTTCAAGATTCATTATCTTTATTCCCCTCGTGTCGGTACGTGACACTCCGCTCCTCAATATACTATCCTGGTGTCGGAACGTGACATTCCGATCCTCATATACTATCCTGGTACCGGAACGTGGCACCCGATCCATATTCTATCCTGGTGTCGGAACGTGACACCCGATCCATATTCTATCCTGGTACCGGAACGTGGCACCCGATCCATATTCTATCCTGGTGTCGGAACGTGACACCCGATCCATATTCTATCCTGGTGTCGGAACGTGACACCCGATCCATATTCTATCCTGGTACCGGAACGTGGCACCCGATCCATATTCTATCCTGGTGTCAGAACGTGATACTCCGATCCACTAATATCATTCTGTAAATCATCAAGCCTTCTCTATTCCAAGGCATCATCAATCCCATTACTTTAATTCATCAAGCCTTCTTCTATACCAAGGCATCATCATTAATAATGTATATTAAAGTTTCTTTTCAATATTTGGGATTCAATATTTTCATCATGTTATCTTATCACAATCACATAATCATATTCATGCAAACATACAATTAAGCATACAGTAGGGTTTACAATACTACCAATACATATCATTCTCTATTAAGAGTTTACTATGAAAGCATGAAAACCATAACCTACCTCCACCGAAGAATTGAAATCAAGCAAGTTAATCCTCAAAGCTTGGTGTTTTTCCTCTTCTTCTCGATCGTTTCTCTCTCTCCCTTCTTGTTCTTTCTATTTTCTTATTCAAACCCGCTTTCTTTTACCCTAATTAGTATATAATTAAGAATAAAAGATGGCAATAATACCCCACTAATTAACTTAGGGTTACCTCTTTTAACCCCCAAGAATTTGAGTTATTAATATAAACCCACGAAATCTATAATTAAGGAAAGAATAGTCCCAAAACGTCCCTTAAAACGTGTAAGGAAATCCGATTCTGCCTGGGATTTGCGCAACCTGTGACGGGCCGTCGTGCCTGTGACGGGCCGTCGTGCCTGCGACGGTCCGTCCTGCAGGTCGTCGCAAGGTTCAGAGACCCAATATTTCCACCAAGGGTCTGTGACGGTCCGTCACACCTGTGACGGTCCGTCCTGCCATTCCGTCACAAAGTTCAGAGAGTCGATTTTCAGTACCCAATTTCAGATTTTCTAAGTGTTTTGAAACGAGACCCTGCGACGGTCCGTCGTGCCCATGACGTTCCGTCGTGGGGTCCGTCGCTTCTGCCAGTTTTTCCAGAATTGAAGTCTGTTGCTCAAAACGACTAAACGGGTCGTTACATTAGATACCAATTTACCCATCGTTCGTCCCCGAACGATCAAAGGAAGGAAAACAAGGGCGAAAAGGAGTACCTGAATCTGTAAACAGATGTGGGTATTTTTCTCGCATATCCGCCTCCTTCTCCCAAGTGGCTTCTTCAAACGGTCGATTCTTCCATTGCACATTGATGAATGCAATCTCTCTTGACCTCAACTTGCGAACTTCTCTATCTAAAATAGCAACAGGCTCCTCCTCATAAGACAAGTTCTCATCAAGCAAAACTGAATCCCAACGGATAATGTAGTTTCCATCTCCGTGGTATCTTTTCAACATAGACACATGGAATACCGGATGTACTCCGGACAGCCCTGGAGGCAAGGCTAACTCATAAGCCACCTCTCCTACTCGCTTTAGTACTTCAAAGGGACCAATGTACCTTGGACTTAGCTTACCCCTTTTTCCAAATCGCATCACCCCTTTCATTGGCGAAACTTTCAACAAGACTTGTTCACCTTCCATGAACTCTAAGTCTCTAACCTTTCGATCTGCATATTCTTTTTGTCTACTTTGCGCCGCTAACAGCTTTTCTTGAATAGACTTCACTTTTTCCATCGAATCCCTCAAGAGATCAGTACCCCAAGGTCTAACCTCGAATGCATCAAACCAACCAATGGGAGACCTACATCTCCTCCCATATAATGCTTCAAATGGGGTCATATCAATGCTCGAGTGATAGCTATTATTGTATGAAAATTCCGCTAAGGGTAAGAAGCTATCCCAATGGCCACCAAATTCTATCACACACGCACGGAGCATATCCTCCAACACTTGAATCGTTCGCTCAGACTGACCATCGGTCTGGGGATGGAACGCAGTACTAAGGTCCAACCTAGTACCCAATTCAGCATGCAATGTCTTCCAAAACTTAGAAGTAAACTGCGTACCTCTATCTGATATGATGGATAGTGGAACCCCATGCAATCGCACCACTTCCGAGATGTAAAGTTTGGCTAACTTTTCTGCATTGTAAGTCACCTTGACCGGAATGAAATGAGCAGATTTAGTTAACCTATCAACAATCACCCAAATGGAGTCATACTTACCCATTGTCTTCGGAAGACCAACCACAAAATCCATTGCAATTCTTTCCCACTTCCATTCCGGAATGGGCATTCTCTGAAGTGTTCCTCCGGGCCTTTGGTGTTCATACTTTACTTGTTGACAGTTTGGACATTTGGCAATAAAATCCACAATGTCGCGCTTCATTCTACTCCACCAAAAGTGTTGTTTTAGGTCACGATACATCTTGGTTGCACCCGGATGTATAGAATACCTTGAACTATGAGCTTCTGTCAGAATAGTGTTGATCAAATCATCAACACGGGGCACACATACCCTTCCCTTGATTCTCAAAACACCTTCCTCATCGATTTGTGCTTCCTTAGCCTCTCCTCGCAATACCTTATCTTGGATTCTTCTTAGTTTCTCATCATCAAACTGTTTTCCCTTAATTTTGTCAAGAAAAGAAGATCTTGACTCTACAGAAGCCAACAATCCTCCCTTCTCATTTACCTCTAATCTCATCAAGTCATTAGCTAGAGTCTGAACCTCTCTAGCCAAAGGGCGTCTAGAAGTTTGCAAGTGAGCTAGACTTCCCATGCTTCCCGCCTTTCTACTTAAAGCATCCGCTACAACATTCGCCTTCCCCGGATGATACAAAATGGTGATGTCGTAGTCCTTCAGTAGTTCCATCCATCTTCTCTGTCTCAAGTTCAAATCTTTCTGAGTAAAGACATACTGAAGGCTACGATGATCCGTGTAGACCTCACACTTAACCCCATATAAATAGTGTCTCCATTGCTTTAATGCAAACACTACCGCAGCCAATTCCAAATCATGGTTTGGATAGTTACGTTCATGCACTTTTAATTGCCTCGAAGCATAAGCAATCACACTCTTCTCTTGCTTTAGTACTACACCCAAACCCGAATAGGATGCATCACAATAAACAATGAAGTTCTTACCCTCTACTGGCAAGGTAAGGATAGGTGCGGTAGTCAACAAAGTTTTGAGCTTCTGAAAGCTTTCCTCACATTCGTCCGACCATACAAATGGAACATTCTGCTTAGTCAAGTTCGTCAATTGGGAAGCAATAGAAAAGAATCCCTTGACGAATCGACGGTAGTAGCTAGCTAACCCAACAAAGCTCGTTATTTCTAACACATTAGTAGGTCTCACCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCACGTGTCCCAAGAAGGACACTGCATCTAGCCAAAACTCACACTTAGAGAACTTGGCATAAAGCTTTTTCTCCCTTAACATTTCCAATACCATTCTCAAATGCTCTTCATGTTCCTTCTTGCTCTTTGAGTATACCAATATATCATCAATAAATACGATCACGAAGAGGTCCAAATATGGCTTAAAAATCCCGTTCATCAAGCTCATGAACGCAGCAGGGGCATTCGTAAGACCAAAAGACATCACTACAAATTCGTAATGCCCATACCTCGTTCGAAAAGCAGTCTTTGGCACATCCGTTGCCCATATTTTCAATTGATGATAACCGGATCTCAAGTCAATCTTAGAGAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATCAATGCGGGGAAGAGGATACTTGTTCTTTATGGTTACCTTGTTTAGTTGTCTGTAGTCTATACACATTCGAAAACTCCCATCCTTCTTCTTCACAAACAAAATCGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAGCCTTTGCTCAACAACTCTTGAAGTTGGGCTTTTAACTCCCTTTCGAAACCTCTTTGATGTCGATGCCATGGTGAATTCATTTGGCTTCACTCCTTCCACCTCTACCACGAAATCTACCACTTCTTGGAAGGATTTTGCAGTAGCCGCTACCTGTAAGGCTGAAATCCGCAACTCTGACCTCAACCCTTTCACAAAACGACGAATCCGCTCTTGTGGACTGAAACAAAGTTGAGTGGCATACCTGGATAGTGCACGGAACTTAGCCTCATAAGCATTAACCGACATGCTACCTTGCTCTAGGCTCAGGAACTCATCCCTTTTCCTATCCCTCAAAGTCCGGGGGATATACTTCTCCATAAACAAGCTAGAGAACGAGGCCCAAGTCATAGGTGGTGCCTCTATTGGTTGACACTCAATATGTGACCGCCACCACATTTTGGCGTTCCCTTGAAACTGATAAGTCACAAACTCCACACCAAACCGTTCTACTATACCCATCTTGTGTAGTAGCTCGTGACAGTCAACCAGAAAATCATAAGCATCCTCCGATTCAGCACCCTTGAAGACTGGAGATTTCAATTTCAAGAACTTACTGAAAAGTTCATGCTGATCACTTGTCATTATAGGCCCAGTAGTCAGACGTGGAAACGTGCCTATTTCCAATGGAACATCCATGCGGGGAGCCATAGTAGCCGCATGTTGTACCTCCGGAGCCTGAGGTGCTGGTGCAGAAAACACTGGGGGTATCTGGCCCTGATCAGATAACCCGCTAAGATTAGCCAGAACCCGATTGATCATCTCTGGGGTAGGTTGGGGTGGCATTTCCTCATTCTGCACTTGTTCATTCACCCCATCCTCCCCCTCTCTTATCACTTCCTCAGTCGGTGGAGGAGTCACCGCCCTAGTACCAGATGGGATCGGTGCTCGTCCTCTTCCTCTAGAGGACGTCCTCCCACGACCTCTACCACGGCCCCTTGCCGCTGTTCTTCCTCGAGCCACAGCCCCAGTGGCTGGCTCAGACGCTTCTTGTCTTGCCGATGTTGGTGTTGGCGCAGTCGTTGCTCTAGTTCTAACCATCCGCGAAATAGAGTGAAGATGGTCAGATACCAATTCGTATCGCCTAGATACCAATTGGACTCAAGTAGTAGCACGAAAGAAAGAATGAAAGAATGGAATTTTCCTAAAGTCTTATAGCCTCTCAAGGAAAAGTAAAGGCATCCCCCTACCGTTCCTTAAGACCCTACTAGACCTGTTCTTGTGTGATGAGACCAACGAACCTAATGCTCTGATACCAAGTTTTGTCACGACCCAAATCCAGGCCGCGACTGGCACCCACACTTACCCTCCTATGTGAGCGAACCAACCAATCTAAACCTTAACATTTCAATGTAATAACAACAGAAAGTAATGCGAAAGACTTAAACTCATTAATAAAAACCAATTCAATAACTATCAATATTCAACATCTATTATTCCCAAAACCTGGAAGTCATCATCACAAGAACATCTACTTTCAACTACTAATTCTAAGAGTTTCTAAGAAGCTAAAAATACATAAGAAGCTAGTCCATGCCGGAAGTTCAAGGCATCAAGACATGAAGGAGAAGATCCAGTCCAAGCTAAAAGCGTTAGCTCACCCTGAAGATCCGGTGTGACGAAGACTGGCTTGAGTTACTGTTGAGTCGAAGATGACGGCACGTTTGCTGCACTCCACAAATAACAACAAGAAAAACATAAAAGTAGGGGTCAGTACAAAACACGGGTACTGAGTAGATATCATCGGCCAACTCAAAATAGAAAACAGTATGTATTAAGCAATATCATAAAATCAACTAATATCCTTAGCATGCAGCATTTACAGTTACCATAACCCTTGGTTACAACACCAAGCACATCAATGAGGACTCACACCTCCTCATCATACTCATTTGGAAATTTAGTTCATTAGATTGGATATTTTAACATATTTCAAGATTCATTATCTTTATTCCCCTCGTGTCGGTACGTGACACTCCGCTCCTCAATATACTATCCTGGTGTCGGAACGTGACATTCCGATCCTCATATACTATCCTGGTACCGGAACGTGGCACCCGATTCATATTCTATCCTGGTGTCGGAACGTGACACCCGATCCATATTCTATCCTGGTACCGGAACGTGGCACCCGATCCATATTCTATCCTGGTGTCGGAACGTGACACCCGATCCATATTCTATCCTGGTGTCGGAACGTGACACCCGATCCATATTCTATCCTGGTACCGGAACGTGGCACCCGATCCATATTCTATCCTGGTGTCGGAACGTGACACTCCGATCCACTAATATCATTCTGTAAATCATCAAGCCTTCTCTATTCCAAGGCATCATCAATCCCATTACTTTAATTCATCAAGCCTTCTTCTATACCAAGGCATCATCATTAATAATGTATATTAAA</genome_strand>
        <mrna_strand>AGTATGTATTAAGCAATATCATAAAATTAACTAATATCCTTAGCATGCAGCATTTGCAATTACCATAACCCTTGGTTGCATCACCAAGCACATCAATGAGGACTCACACCTCCTCATCATACTTATTTGGGAATTTAGTTCATTGGATTGCATATATTAACATATTTCAAGATTCATCATATTTATTCCCCTCGTGTCCTTACGTGACACTCCACTCCTCAATATACTATCCTG..................................................................................................................GCACCGGAACGTGGCACCCGATCCATATTCTATCCTGGTGTCAGAACGTGACACCCGATCCATATTCTATCCTGGTGTCGGAACGTGACACCCGATCCATATTCTATCCTGGTACCGGAACGTGGCACCCGATCCATATTCTATCCTGGTGTCGGAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGACACCCGATCCATATTCTATCCTGGTACCGGAACGTGGCACCCGATCC.....................................................................................CCT-AATCTCACCACTTTCGTTCATCAAGCCTTCTTTTATACCAAGGCATCATTATTAACAAAGTAGATTAGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E209683" ref_strand="+" ref_description="SGN-E209683 [cLEC-54-L6]">
      <seq>taatgaactaaattcccaaatgagtatgatgaggaggtgtgagtcctcattgatgtgcttggtgttgtaaccaagggttatggtaactataaatgctgcatgttaaggatattagttgattttatgatattgcttaatacatactgttccctattttgagttggccgatgatatctactcagtacccgtggtttgtactgacccctacttttatgtttatcttcttgttatttgtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0101H16.1" temp_strand="+" temp_description="C02SLe0101H16.1  AC215444.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0101H16 sequenced_by:kribb upload_account_name:korea">
        <position start="13327" stop="14162"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="13627" g_stop="13862" g_length="236"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="236" r_length="236" r_score="0.966"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0101H16.1" gen_strand="+" ref_id="SGN-E209683" ref_strand="+">
        <total_alignment_score>0.966</total_alignment_score>
        <cumulative_length_of_scored_exons>236</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0101H16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E209683" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="13627" e_stop="13862"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAATGAACTAAATTTCCAAATGAGTATGATGAGGAGGTGTGAGTCCTCATTGATGTGCTTGGTGTTGTAACCAAGGGTTATGGTAACTGTAAATGCTGCATGCTAAGGATATTAGTTGATTTTATGATATTGCTTAATACATACTGTTTTCTATTTTGAGTTGGCCGATGATATCTACTCAGTACCCGTGTTTTGTACTGACCCCTACTTTTATGTTTTTCTTGTTGTTATTTGTG</genome_strand>
        <mrna_strand>TAATGAACTAAATTCCCAAATGAGTATGATGAGGAGGTGTGAGTCCTCATTGATGTGCTTGGTGTTGTAACCAAGGGTTATGGTAACTATAAATGCTGCATGTTAAGGATATTAGTTGATTTTATGATATTGCTTAATACATACTGTTCCCTATTTTGAGTTGGCCGATGATATCTACTCAGTACCCGTGGTTTGTACTGACCCCTACTTTTATGTTTATCTTCTTGTTATTTGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E351546" ref_strand="+" ref_description="SGN-E351546 [cTOS-12-I18]">
      <seq>ttggccgatgatatctactcagtagccgtgttttgtactgacccctacttttatgtttttcttcttggtatttgtggagtgcagcaaacgtgccgtcatcttcgactcaacagtaactcaagccagtcttcgtcacaccggatcttcagggtgagctaacgcttctagcttggactggatcttctccttcatgtcttgatgccttgaacttccggcatggactagcttcttatgtaattttttagcttcttagaaactcttagaattagtagtttaaagtagatgttcttgtgatgatgacttccaggttttgggaataatagatgtttaataatagtagttattgattttattaatgagtttaagtcttccgcattactttctgttgctattacattgaaatgttaaggtttagattggttggttcgctcacataggagggtaagtgtgggtgccagtggcggcccggatttgggtcgtgacaaaacttggtatcagagcattaggttcgttggtctcatcacacaagaacaagtctagtagagtcttaaggaacggtagggggacgcttttacttttccttgagaggctataagactttaggaaaacttcactctttcattctttctttcgtgctactacttcgagtcaattggtatctaagcgatacgaattggtatctgaccatnctcactctcttgccagatgggtagaactagagcaacgact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0101H16.1" temp_strand="+" temp_description="C02SLe0101H16.1  AC215444.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0101H16 sequenced_by:kribb upload_account_name:korea">
        <position start="13487" stop="14820"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="13787" g_stop="14520" g_length="734"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="729" r_length="729" r_score="0.944"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0101H16.1" gen_strand="+" ref_id="SGN-E351546" ref_strand="+">
        <total_alignment_score>0.944</total_alignment_score>
        <cumulative_length_of_scored_exons>734</cumulative_length_of_scored_exons>
        <coverage percentage="1.007" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0101H16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E351546" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="13787" e_stop="14520"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGGCCGATGATATCTACTCAGTACCCGTGTTTTGTACTGACCCCTACTTTTATGTTTTTCTTGTTGTTATTTGTGGAGTGCAGCAAACGTGCCGTCATCTTCGACTCAACAGTAACTCAAGCCAGTCTTCGTCACACCGGATCTTCAGGGTGAGCTAACGCTTTTAGCTTGGACTGGATCTTCTCCTTCATGTCTTGATGCCTTGAACTTCCGGCATGGACTAGCTTCTTATGT-A-TTTTTAGCTTCTTAGAAACTCTTAGAATTAGTAGTTGAAAGTAGATGTTCTTGTGATGATGACTTCCAGGTTTTGGGAATAATAGATGTTGAATATTGATAGTTATTGAATTGGTTTTTATTAATGAGTTTAAGTCTTTCGCATTACTTTCTGTTGTTATTACATTGAAATGTTAAGGTTTAGATTGGTTGGTTCGCTCACATAGGAGGGTAAGTGTGGGTGCCAGTCGCGGCCTGGATTTGGGTCGTGACAAAACTTGGTATCAGAGCATTAGGTTCGTTGGTCTCATCACACAAGAACAGGTCTAGTAGGGTCTTAAGGAACGGTAGGGGGATGCCTTTACTTTTCCTTGAGAGGCTATAAGACTTTAGGAAAATTCCATTCTTTCATTCTTTCTTTCGTGCTACTACTT-GAGTCCAATTGGTATCTAGGCGATACGAATTGGTATCTGACCATCTTCACTCTATTTCGCGGATGGTTAGAACTAGAGCAACGACT</genome_strand>
        <mrna_strand>TTGGCCGATGATATCTACTCAGTAGCCGTGTTTTGTACTGACCCCTACTTTTATGTTTTTCTTCTTGGTATTTGTGGAGTGCAGCAAACGTGCCGTCATCTTCGACTCAACAGTAACTCAAGCCAGTCTTCGTCACACCGGATCTTCAGGGTGAGCTAACGCTTCTAGCTTGGACTGGATCTTCTCCTTCATGTCTTGATGCCTTGAACTTCCGGCATGGACTAGCTTCTTATGTAATTTTTTAGCTTCTTAGAAACTCTTAGAATTAGTAGTTTAAAGTAGATGTTCTTGTGATGATGACTTCCAGGTTTTGGGAATAATAGATGTTTAATA---ATAG-TAGT-TATT-GATTTTATTAATGAGTTTAAGTCTTCCGCATTACTTTCTGTTGCTATTACATTGAAATGTTAAGGTTTAGATTGGTTGGTTCGCTCACATAGGAGGGTAAGTGTGGGTGCCAGTGGCGGCCCGGATTTGGGTCGTGACAAAACTTGGTATCAGAGCATTAGGTTCGTTGGTCTCATCACACAAGAACAAGTCTAGTAGAGTCTTAAGGAACGGTAGGGGGACGCTTTTACTTTTCCTTGAGAGGCTATAAGACTTTAGGAAAACTTCACTCTTTCATTCTTTCTTTCGTGCTACTACTTCGAGT-CAATTGGTATCTAAGCGATACGAATTGGTATCTGACCATNCTCACTCTCTTGC-CAGATGGGTAGAACTAGAGCAACGACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E356696" ref_strand="+" ref_description="SGN-E356696 [cTOS-21-K7]">
      <seq>ttggccgatgatatctactcagtagccgtgttttgtactgacccctacttttatgtttttcttcttgttatttgtggagtgcagcaaacgtgccgtcatcttcgactcaacagtaactcaagccagtcttcgtcacaccggatcttcagggtgagctaacgcttctagcttggactggatcttctccttcatgtcttgatgccttgaacttccggcatggactagcttcttatgtaattttttagcttcttagaaactcttagaattagtagtttaaagtagatgttcttgtgatgatgacttccaggttttgggaataatagatgtttaataatagtagttattgattttattaatgagtttaagtcttccgcattactttctgttgctattacattgaaatgttaaggtttagattggttggttcgctcacatangagggtaagtgtgggtgccagtggcggcccggatttgggtcgtgacaaaacttggtatcagagcattaggttcgttggtctcatcacacaagaacaagtctagtagagtcttaaggaacggtagggggacgcttttacttttccttgagaggctataagactttaggaaaacttcactctttcattctttctttcgtgctactacttgagtccaattg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0101H16.1" temp_strand="+" temp_description="C02SLe0101H16.1  AC215444.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0101H16 sequenced_by:kribb upload_account_name:korea">
        <position start="13487" stop="14745"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="13787" g_stop="14445" g_length="659"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="655" r_length="655" r_score="0.954"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0101H16.1" gen_strand="+" ref_id="SGN-E356696" ref_strand="+">
        <total_alignment_score>0.954</total_alignment_score>
        <cumulative_length_of_scored_exons>659</cumulative_length_of_scored_exons>
        <coverage percentage="1.006" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0101H16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E356696" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="13787" e_stop="14445"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGGCCGATGATATCTACTCAGTACCCGTGTTTTGTACTGACCCCTACTTTTATGTTTTTCTTGTTGTTATTTGTGGAGTGCAGCAAACGTGCCGTCATCTTCGACTCAACAGTAACTCAAGCCAGTCTTCGTCACACCGGATCTTCAGGGTGAGCTAACGCTTTTAGCTTGGACTGGATCTTCTCCTTCATGTCTTGATGCCTTGAACTTCCGGCATGGACTAGCTTCTTATGT-A-TTTTTAGCTTCTTAGAAACTCTTAGAATTAGTAGTTGAAAGTAGATGTTCTTGTGATGATGACTTCCAGGTTTTGGGAATAATAGATGTTGAATATTGATAGTTATTGAATTGGTTTTTATTAATGAGTTTAAGTCTTTCGCATTACTTTCTGTTGTTATTACATTGAAATGTTAAGGTTTAGATTGGTTGGTTCGCTCACATAGGAGGGTAAGTGTGGGTGCCAGTCGCGGCCTGGATTTGGGTCGTGACAAAACTTGGTATCAGAGCATTAGGTTCGTTGGTCTCATCACACAAGAACAGGTCTAGTAGGGTCTTAAGGAACGGTAGGGGGATGCCTTTACTTTTCCTTGAGAGGCTATAAGACTTTAGGAAAATTCCATTCTTTCATTCTTTCTTTCGTGCTACTACTTGAGTCCAATTG</genome_strand>
        <mrna_strand>TTGGCCGATGATATCTACTCAGTAGCCGTGTTTTGTACTGACCCCTACTTTTATGTTTTTCTTCTTGTTATTTGTGGAGTGCAGCAAACGTGCCGTCATCTTCGACTCAACAGTAACTCAAGCCAGTCTTCGTCACACCGGATCTTCAGGGTGAGCTAACGCTTCTAGCTTGGACTGGATCTTCTCCTTCATGTCTTGATGCCTTGAACTTCCGGCATGGACTAGCTTCTTATGTAATTTTTTAGCTTCTTAGAAACTCTTAGAATTAGTAGTTTAAAGTAGATGTTCTTGTGATGATGACTTCCAGGTTTTGGGAATAATAGATGTTTAATA---ATAG-TAGT-TATT-GATTTTATTAATGAGTTTAAGTCTTCCGCATTACTTTCTGTTGCTATTACATTGAAATGTTAAGGTTTAGATTGGTTGGTTCGCTCACATANGAGGGTAAGTGTGGGTGCCAGTGGCGGCCCGGATTTGGGTCGTGACAAAACTTGGTATCAGAGCATTAGGTTCGTTGGTCTCATCACACAAGAACAAGTCTAGTAGAGTCTTAAGGAACGGTAGGGGGACGCTTTTACTTTTCCTTGAGAGGCTATAAGACTTTAGGAAAACTTCACTCTTTCATTCTTTCTTTCGTGCTACTACTTGAGTCCAATTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E356206" ref_strand="+" ref_description="SGN-E356206 [cTOS-20-F19]">
      <seq>ttggccgatgatatctactcagtagccgtgttttgtactgacccctacttttatgtttttcttcttgttatttgtggagtgcagcaaacgtgccgtcatcttcgactcaacagtaactcaagccagtcttcgtcacaccggatcttcagggtgagctaacgcttctagcttggactggatcttctccttcatgtcttgatgccttgaacttccggcatggactagcttcttatgtaattttttagcttcttagaaactcttagaattagtagtttaaagtagatgttcttgtgatgatgacttccaggttttgggaataatagatgtttaataatagtagttattgattttattaatgagtttaagtcttccgcattactttctgttgctattacattgaaatgttaaggtttagattggttggttcgctcacataggagggtaagtgtgggtgccagtggcggcccggatttgggtcgtgacaaaacttggtatcagagcattagggtcgttggtctcatcacacaagaacaagtctagtagagtcttaagggacggtanggggacgcttttacttttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0101H16.1" temp_strand="+" temp_description="C02SLe0101H16.1  AC215444.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0101H16 sequenced_by:kribb upload_account_name:korea">
        <position start="13487" stop="14670"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="13787" g_stop="14370" g_length="584"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="580" r_length="580" r_score="0.950"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0101H16.1" gen_strand="+" ref_id="SGN-E356206" ref_strand="+">
        <total_alignment_score>0.950</total_alignment_score>
        <cumulative_length_of_scored_exons>584</cumulative_length_of_scored_exons>
        <coverage percentage="1.007" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0101H16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E356206" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="13787" e_stop="14370"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGGCCGATGATATCTACTCAGTACCCGTGTTTTGTACTGACCCCTACTTTTATGTTTTTCTTGTTGTTATTTGTGGAGTGCAGCAAACGTGCCGTCATCTTCGACTCAACAGTAACTCAAGCCAGTCTTCGTCACACCGGATCTTCAGGGTGAGCTAACGCTTTTAGCTTGGACTGGATCTTCTCCTTCATGTCTTGATGCCTTGAACTTCCGGCATGGACTAGCTTCTTATGT-A-TTTTTAGCTTCTTAGAAACTCTTAGAATTAGTAGTTGAAAGTAGATGTTCTTGTGATGATGACTTCCAGGTTTTGGGAATAATAGATGTTGAATATTGATAGTTATTGAATTGGTTTTTATTAATGAGTTTAAGTCTTTCGCATTACTTTCTGTTGTTATTACATTGAAATGTTAAGGTTTAGATTGGTTGGTTCGCTCACATAGGAGGGTAAGTGTGGGTGCCAGTCGCGGCCTGGATTTGGGTCGTGACAAAACTTGGTATCAGAGCATTAGGTTCGTTGGTCTCATCACACAAGAACAGGTCTAGTAGGGTCTTAAGGAACGGTAGGGGGATGCCTTTACTTTTC</genome_strand>
        <mrna_strand>TTGGCCGATGATATCTACTCAGTAGCCGTGTTTTGTACTGACCCCTACTTTTATGTTTTTCTTCTTGTTATTTGTGGAGTGCAGCAAACGTGCCGTCATCTTCGACTCAACAGTAACTCAAGCCAGTCTTCGTCACACCGGATCTTCAGGGTGAGCTAACGCTTCTAGCTTGGACTGGATCTTCTCCTTCATGTCTTGATGCCTTGAACTTCCGGCATGGACTAGCTTCTTATGTAATTTTTTAGCTTCTTAGAAACTCTTAGAATTAGTAGTTTAAAGTAGATGTTCTTGTGATGATGACTTCCAGGTTTTGGGAATAATAGATGTTTAATA---ATAG-TAGT-TATT-GATTTTATTAATGAGTTTAAGTCTTCCGCATTACTTTCTGTTGCTATTACATTGAAATGTTAAGGTTTAGATTGGTTGGTTCGCTCACATAGGAGGGTAAGTGTGGGTGCCAGTGGCGGCCCGGATTTGGGTCGTGACAAAACTTGGTATCAGAGCATTAGGGTCGTTGGTCTCATCACACAAGAACAAGTCTAGTAGAGTCTTAAGGGACGGTANGGGGACGCTTTTACTTTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E355114" ref_strand="+" ref_description="SGN-E355114 [cTOS-18-B12]">
      <seq>ttaggttcgttggtctcatcacacaagaacaggtctagtagagtctttaggaacggtagggggacgcctttacttttctttgagaggctataagactttaggaaaatttcaccctttcattctttctttcgtgctactacttgagtccaattggtatctaggcgatacaaattggtatctgaccatcttcactctcttttgcagatggttagaactagagcaacgaccacgtcaacaccaacaccggccagacaagaaacaactgagccagccactggggctgtgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0101H16.1" temp_strand="+" temp_description="C02SLe0101H16.1  AC215444.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0101H16 sequenced_by:kribb upload_account_name:korea">
        <position start="13993" stop="14878"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="14293" g_stop="14578" g_length="286"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="286" r_length="286" r_score="0.934"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0101H16.1" gen_strand="+" ref_id="SGN-E355114" ref_strand="+">
        <total_alignment_score>0.934</total_alignment_score>
        <cumulative_length_of_scored_exons>286</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0101H16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E355114" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="14293" e_stop="14578"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTAGGTTCGTTGGTCTCATCACACAAGAACAGGTCTAGTAGGGTCTTAAGGAACGGTAGGGGGATGCCTTTACTTTTCCTTGAGAGGCTATAAGACTTTAGGAAAATTCCATTCTTTCATTCTTTCTTTCGTGCTACTACTTGAGTCCAATTGGTATCTAGGCGATACGAATTGGTATCTGACCATCTTCACTCTATTTCGCGGATGGTTAGAACTAGAGCAACGACTGCGCCAACACCAACATCGGCAAGACAAGAAGCGTCTGAGCCAGCCACTGGGGCTGTGG</genome_strand>
        <mrna_strand>TTAGGTTCGTTGGTCTCATCACACAAGAACAGGTCTAGTAGAGTCTTTAGGAACGGTAGGGGGACGCCTTTACTTTTCTTTGAGAGGCTATAAGACTTTAGGAAAATTTCACCCTTTCATTCTTTCTTTCGTGCTACTACTTGAGTCCAATTGGTATCTAGGCGATACAAATTGGTATCTGACCATCTTCACTCTCTTTTGCAGATGGTTAGAACTAGAGCAACGACCACGTCAACACCAACACCGGCCAGACAAGAAACAACTGAGCCAGCCACTGGGGCTGTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E352180" ref_strand="+" ref_description="SGN-E352180 [cTOS-13-I20]">
      <seq>cccttgaagaccggaggtttcaatttcaagaacttactgaaaagttcatgctgatcatttgtcattataggcccagtagtcaaacgtggaaatgtacctatgtgcaatggaacatccatgcggggagccatagtagccgcatgttgtacttctgaaaccggaggtgttggcgcagaaaacactggaggtgcttgaccttgatcagataaaccgctaagataagccagaacctgattgatcatctctggggtaggttggggtggcatttcctcattttgcacttgttcagtttccccatcctccccttctcttattacttcctcagtcggtggaggagtcaccgccctagtaccagatgggctcggttctcgttctcttcctctagatgacgtcctcccacgacctctaccacggccccttgccgctgttctcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0101H16.1" temp_strand="-" temp_description="C02SLe0101H16.1  AC215444.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0101H16 sequenced_by:kribb upload_account_name:korea">
        <position start="15317" stop="14285"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15017" g_stop="14585" g_length="433"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="433" r_length="433" r_score="0.919"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0101H16.1" gen_strand="-" ref_id="SGN-E352180" ref_strand="+">
        <total_alignment_score>0.919</total_alignment_score>
        <cumulative_length_of_scored_exons>433</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0101H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E352180" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15017" e_stop="14585"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCCTTGAAGACTGGAGATTTCAATTTCAAGAACTTACTGAAAAGTTCATGCTGATCACTTGTCATTATAGGCCCAGTAGTCAGACGTGGAAACGTGCCTATTTCCAATGGAACATCCATGCGGGGAGCCATAGTAGCCGCATGTTGTACCTCCGGAGCCTGAGGTGCTGGTGCAGAAAACACTGGGGGTATCTGGCCCTGATCAGATAACCCGCTAAGATTAGCCAGAACCCGATTGATCATCTCTGGGGTAGGTTGGGGTGGCATTTCCTCATTCTGCACTTGTTCATTCACCCCATCCTCCCCCTCTCTTATCACTTCCTCAGTCGGTGGAGGAGTCACCGCCCTAGTACCAGATGGGATCGGTGCTCGTCCTCTTCCTCTAGAGGACGTCCTCCCACGACCTCTACCACGGCCCCTTGCCGCTGTTCTTC</genome_strand>
        <mrna_strand>CCCTTGAAGACCGGAGGTTTCAATTTCAAGAACTTACTGAAAAGTTCATGCTGATCATTTGTCATTATAGGCCCAGTAGTCAAACGTGGAAATGTACCTATGTGCAATGGAACATCCATGCGGGGAGCCATAGTAGCCGCATGTTGTACTTCTGAAACCGGAGGTGTTGGCGCAGAAAACACTGGAGGTGCTTGACCTTGATCAGATAAACCGCTAAGATAAGCCAGAACCTGATTGATCATCTCTGGGGTAGGTTGGGGTGGCATTTCCTCATTTTGCACTTGTTCAGTTTCCCCATCCTCCCCTTCTCTTATTACTTCCTCAGTCGGTGGAGGAGTCACCGCCCTAGTACCAGATGGGCTCGGTTCTCGTTCTCTTCCTCTAGATGACGTCCTCCCACGACCTCTACCACGGCCCCTTGCCGCTGTTCTCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E329287" ref_strand="+" ref_description="SGN-E329287 [cTOD-2-K13]">
      <seq>acctagcccatctggtactaaggcggtgacacctccaccaactgaggaagtggtaagagagggtgaggatggggagaatgaacaagtgcagaatgaggaattgccaccccaacctacccaagagatgatcaatcaggttcttgcttaccttagcgggttatctgatcaaggccaagcacctccagtgttttctgcactagcacctcaggctccggaggtacaacatgcgcctactgtgactccccgcatcgatacctcattggaaataggaacgtttccccgtctgactacagggcctataatgacaaatgatcagcatgaactttttagtaagttcttgaaattgaaacctcaagtctacaagggtgttgaatctgaggatgcctacgattttctggttgactgtcatgagctactacacaagatgggtatagtagaacggtttggtgttgagtttgtgacttatcagtttcaagggaacgccaaaatgtggtggcggtcacatgttgagtgtcaaccaacagaggcaccacgtatgacttgggcatcattct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0101H16.1" temp_strand="+" temp_description="C02SLe0101H16.1  AC215444.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0101H16 sequenced_by:kribb upload_account_name:korea">
        <position start="14352" stop="15505"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="14652" g_stop="15205" g_length="554"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="554" r_length="554" r_score="0.915"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0101H16.1" gen_strand="+" ref_id="SGN-E329287" ref_strand="+">
        <total_alignment_score>0.915</total_alignment_score>
        <cumulative_length_of_scored_exons>554</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0101H16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E329287" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="14652" e_stop="15205"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACCGATCCCATCTGGTACTAGGGCGGTGACTCCTCCACCGACTGAGGAAGTGATAAGAGAGGGGGAGGATGGGGTGAATGAACAAGTGCAGAATGAGGAAATGCCACCCCAACCTACCCCAGAGATGATCAATCGGGTTCTGGCTAATCTTAGCGGGTTATCTGATCAGGGCCAGATACCCCCAGTGTTTTCTGCACCAGCACCTCAGGCTCCGGAGGTACAACATGCGGCTACTATGGCTCCCCGCATGGATGTTCCATTGGAAATAGGCACGTTTCCACGTCTGACTACTGGGCCTATAATGACAAGTGATCAGCATGAACTTTTCAGTAAGTTCTTGAAATTGAAATCTCCAGTCTTCAAGGGTGCTGAATCGGAGGATGCTTATGATTTTCTGGTTGACTGTCACGAGCTACTACACAAGATGGGTATAGTAGAACGGTTTGGTGTGGAGTTTGTGACTTATCAGTTTCAAGGGAACGCCAAAATGTGGTGGCGGTCACATATTGAGTGTCAACCAATAGAGGCACCACCTATGACTTGGGCCTCGTTCT</genome_strand>
        <mrna_strand>ACCTAGCCCATCTGGTACTAAGGCGGTGACACCTCCACCAACTGAGGAAGTGGTAAGAGAGGGTGAGGATGGGGAGAATGAACAAGTGCAGAATGAGGAATTGCCACCCCAACCTACCCAAGAGATGATCAATCAGGTTCTTGCTTACCTTAGCGGGTTATCTGATCAAGGCCAAGCACCTCCAGTGTTTTCTGCACTAGCACCTCAGGCTCCGGAGGTACAACATGCGCCTACTGTGACTCCCCGCATCGATACCTCATTGGAAATAGGAACGTTTCCCCGTCTGACTACAGGGCCTATAATGACAAATGATCAGCATGAACTTTTTAGTAAGTTCTTGAAATTGAAACCTCAAGTCTACAAGGGTGTTGAATCTGAGGATGCCTACGATTTTCTGGTTGACTGTCATGAGCTACTACACAAGATGGGTATAGTAGAACGGTTTGGTGTTGAGTTTGTGACTTATCAGTTTCAAGGGAACGCCAAAATGTGGTGGCGGTCACATGTTGAGTGTCAACCAACAGAGGCACCACGTATGACTTGGGCATCATTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E356614" ref_strand="+" ref_description="SGN-E356614 [cTOS-21-N3]">
      <seq>gcgaatccgctcttgaggactgaaacagagttgagtggcatatctggatagtgcacgaaacttagcctcataagcattaactgacaccctaccttgctctaggctcaagaactcatcccttttcttatccctcaaagtccgggggatatacttctccataaacaaactatagaatgaggcccaagtcataggtgatgcctctattggttgacactcgatatgtgaccgccaccacatttgggcgttcccttgaaactgataagtcacaaactccacaccaaaccgttctactatacccatcttgtgtagtagctcgtgacagtcaaccagaaaatcataagcatcctccgattcagcacccttgaagaccggaggtttcaatttcaagaacttactgaaaagttcatgctgatcatttgtcattatagggacagtagtcaaacgtggaaatgtgcctatgtccaatggaacatccatgcggggagccatagtagccgcatgttgtacttctgaaaccggaggtgttggcgcagaaaacactggaggtgcttgaccttgatcagataacccgctaagataagccagaacctgattgatcatctctggggtaggttggggtggcatttcctcattttgcacttgntcagtttccccatccctccctttctctattacttcctcagtcagtggaagagtcactgccctagtatcagatgggct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0101H16.1" temp_strand="-" temp_description="C02SLe0101H16.1  AC215444.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0101H16 sequenced_by:kribb upload_account_name:korea">
        <position start="15674" stop="14356"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15375" g_stop="14656" g_length="720"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="720" r_length="720" r_score="0.924"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0101H16.1" gen_strand="-" ref_id="SGN-E356614" ref_strand="+">
        <total_alignment_score>0.924</total_alignment_score>
        <cumulative_length_of_scored_exons>720</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0101H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E356614" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15375" e_stop="14656"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACGAATCCGCTCTTGTGGACTGAAACAAAGTTGAGTGGCATACCTGGATAGTGCACGGAACTTAGCCTCATAAGCATTAACCGACATGCTACCTTGCTCTAGGCTCAGGAACTCATCCCTTTTCCTATCCCTCAAAGTCCGGGGGATATACTTCTCCATAAACAAGCTAGAGAACGAGGCCCAAGTCATAGGTGGTGCCTCTATTGGTTGACACTCAATATGTGACCGCCACCACATTTTGGCGTTCCCTTGAAACTGATAAGTCACAAACTCCACACCAAACCGTTCTACTATACCCATCTTGTGTAGTAGCTCGTGACAGTCAACCAGAAAATCATAAGCATCCTCCGATTCAGCACCCTTGAAGACTGGAGATTTCAATTTCAAGAACTTACTGAAAAGTTCATGCTGATCACTTGTCATTATAGGCCCAGTAGTCAGACGTGGAAACGTGCCTATTTCCAATGGAACATCCATGCGGGGAGCCATAGTAGCCGCATGTTGTACCTCCGGAGCCTGAGGTGCTGGTGCAGAAAACACTGGGGGTATCTGGCCCTGATCAGATAACCCGCTAAGATTAGCCAGAACCCGATTGATCATCTCTGGGGTAGGTTGGGGTGGCATTTCCTCATTCTGCACTTGTTCATTCACCCCAT-CCTCCCCCTCTCTTATCACTTCCTCAGTCGGTGGAGGAGTCACCGCCCTAGTACCAGATGGGAT</genome_strand>
        <mrna_strand>GCGAATCCGCTCTTGAGGACTGAAACAGAGTTGAGTGGCATATCTGGATAGTGCACGAAACTTAGCCTCATAAGCATTAACTGACACCCTACCTTGCTCTAGGCTCAAGAACTCATCCCTTTTCTTATCCCTCAAAGTCCGGGGGATATACTTCTCCATAAACAAACTATAGAATGAGGCCCAAGTCATAGGTGATGCCTCTATTGGTTGACACTCGATATGTGACCGCCACCACATTTGGGCGTTCCCTTGAAACTGATAAGTCACAAACTCCACACCAAACCGTTCTACTATACCCATCTTGTGTAGTAGCTCGTGACAGTCAACCAGAAAATCATAAGCATCCTCCGATTCAGCACCCTTGAAGACCGGAGGTTTCAATTTCAAGAACTTACTGAAAAGTTCATGCTGATCATTTGTCATTATAGGGACAGTAGTCAAACGTGGAAATGTGCCTATGTCCAATGGAACATCCATGCGGGGAGCCATAGTAGCCGCATGTTGTACTTCTGAAACCGGAGGTGTTGGCGCAGAAAACACTGGAGGTGCTTGACCTTGATCAGATAACCCGCTAAGATAAGCCAGAACCTGATTGATCATCTCTGGGGTAGGTTGGGGTGGCATTTCCTCATTTTGCACTTGNTCAGTTTCCCCATCCCTCCCTTTCTC-TATTACTTCCTCAGTCAGTGGAAGAGTCACTGCCCTAGTATCAGATGGGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E352401" ref_strand="+" ref_description="SGN-E352401 [cTOS-9-N1]">
      <seq>aatccgctcttgaggactgaaacagagttgagtggcatatctggatagtgcacgaaacttagcctcataagcattaactgacaccctaccttgctctaggctcaagaactcatcccttttcttatccctcaaagtccgggggatatacttctccataaacaaactatagaatgaggcccaagtcataggtgatgcctctattggttgacactcgatatgtgaccgccaccacatttgggcgttcccttgaaactgataagtcacaaactccacaccaaaccgttctactatacccatcttgtgtagtagctcgtgacagtcaaccagaaaatcataagcatcctccgattcagcacccttgaagaccggaggtttcaatttcaagaacttactgaaaagttcatgctgatcatttgtcattatagggacagtagtcaaacgtggaaatgtgcctatgtccaatggaacatccatgcggggagccatagtagccgcatgttgtacttctgaaaccggaggtgttggcgcagaaaacactggaggtgcttgaccttgatcagataacccgctaagataagccagaacctgattgatcatctctggggtaggttggggtgccatttccctcatttgcacttgttcagtttccccatcctccccttct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0101H16.1" temp_strand="-" temp_description="C02SLe0101H16.1  AC215444.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0101H16 sequenced_by:kribb upload_account_name:korea">
        <position start="15672" stop="14409"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15372" g_stop="14709" g_length="664"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="664" r_length="664" r_score="0.931"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0101H16.1" gen_strand="-" ref_id="SGN-E352401" ref_strand="+">
        <total_alignment_score>0.931</total_alignment_score>
        <cumulative_length_of_scored_exons>664</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0101H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E352401" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15372" e_stop="14709"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATCCGCTCTTGTGGACTGAAACAAAGTTGAGTGGCATACCTGGATAGTGCACGGAACTTAGCCTCATAAGCATTAACCGACATGCTACCTTGCTCTAGGCTCAGGAACTCATCCCTTTTCCTATCCCTCAAAGTCCGGGGGATATACTTCTCCATAAACAAGCTAGAGAACGAGGCCCAAGTCATAGGTGGTGCCTCTATTGGTTGACACTCAATATGTGACCGCCACCACATTTTGGCGTTCCCTTGAAACTGATAAGTCACAAACTCCACACCAAACCGTTCTACTATACCCATCTTGTGTAGTAGCTCGTGACAGTCAACCAGAAAATCATAAGCATCCTCCGATTCAGCACCCTTGAAGACTGGAGATTTCAATTTCAAGAACTTACTGAAAAGTTCATGCTGATCACTTGTCATTATAGGCCCAGTAGTCAGACGTGGAAACGTGCCTATTTCCAATGGAACATCCATGCGGGGAGCCATAGTAGCCGCATGTTGTACCTCCGGAGCCTGAGGTGCTGGTGCAGAAAACACTGGGGGTATCTGGCCCTGATCAGATAACCCGCTAAGATTAGCCAGAACCCGATTGATCATCTCTGGGGTAGGTTGGGGTGGCATTT-CCTCATTCTGCACTTGTTCATTCACCCCATCCTCCCCCTCT</genome_strand>
        <mrna_strand>AATCCGCTCTTGAGGACTGAAACAGAGTTGAGTGGCATATCTGGATAGTGCACGAAACTTAGCCTCATAAGCATTAACTGACACCCTACCTTGCTCTAGGCTCAAGAACTCATCCCTTTTCTTATCCCTCAAAGTCCGGGGGATATACTTCTCCATAAACAAACTATAGAATGAGGCCCAAGTCATAGGTGATGCCTCTATTGGTTGACACTCGATATGTGACCGCCACCACATTTGGGCGTTCCCTTGAAACTGATAAGTCACAAACTCCACACCAAACCGTTCTACTATACCCATCTTGTGTAGTAGCTCGTGACAGTCAACCAGAAAATCATAAGCATCCTCCGATTCAGCACCCTTGAAGACCGGAGGTTTCAATTTCAAGAACTTACTGAAAAGTTCATGCTGATCATTTGTCATTATAGGGACAGTAGTCAAACGTGGAAATGTGCCTATGTCCAATGGAACATCCATGCGGGGAGCCATAGTAGCCGCATGTTGTACTTCTGAAACCGGAGGTGTTGGCGCAGAAAACACTGGAGGTGCTTGACCTTGATCAGATAACCCGCTAAGATAAGCCAGAACCTGATTGATCATCTCTGGGGTAGGTTGGGGTGCCATTTCCCTCATT-TGCACTTGTTCAGTTTCCCCATCCTCCCCTTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E379315" ref_strand="+" ref_description="SGN-E379315 [TUS-1-J2]">
      <seq>gaatcccttgacaaatcggcggtagtagctagctaacccaacaaagctccttatttctgacacattagtaggtcttacccaattcttcactgtctcaatcttagaaggatccaccatcactccatccttagaaaccacgttccccaagaaggacactacatctagccaaaactcacacttagagaacttggcataaaactttttctccctcaacatttccaataccattctcaaatgctcttcatgttcctccttacttttagagtatatcagtatatcatcaataaatacgatcacaaagagatccaaatatggcttaaaaatcccttttattaaactcataaacgcagcaggggcattcataagaccaaaagacatcactacaaatttgtaatgcccatacctggttctaaaagcagtctttggcacatccgttgcccgtattttcaattgatgataaccggatctcaagtcaatcttagaaaagacacaagcaccttgtaactgatcgaacaagtcattaatgcgaggaagaggatacttgttctttatggttaccttgttncactgccggtagcctatgcacatccgaaaactccaatccttcttctttacaaacaaaaccggagcaccccaaggagatgcagttggtctaatgaagcctttgctcacaactctttgaagtggtcttttaactctcttaactctgcgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0101H16.1" temp_strand="-" temp_description="C02SLe0101H16.1  AC215444.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0101H16 sequenced_by:kribb upload_account_name:korea">
        <position start="16534" stop="15232"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16234" g_stop="15532" g_length="703"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="702" r_length="702" r_score="0.927"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0101H16.1" gen_strand="-" ref_id="SGN-E379315" ref_strand="+">
        <total_alignment_score>0.927</total_alignment_score>
        <cumulative_length_of_scored_exons>703</cumulative_length_of_scored_exons>
        <coverage percentage="0.987" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0101H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E379315" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16234" e_stop="15532"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAATCCCTTGACGAATCGACGGTAGTAGCTAGCTAACCCAACAAAGCTCGTTATTTCTAACACATTAGTAGGTCTCACCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCACGTGTCCCAAGAAGGACACTGCATCTAGCCAAAACTCACACTTAGAGAACTTGGCATAAAGCTTTTTCTCCCTTAACATTTCCAATACCATTCTCAAATGCTCTTCATGTTCCTTCTTGCTCTTTGAGTATACCAATATATCATCAATAAATACGATCACGAAGAGGTCCAAATATGGCTTAAAAATCCCGTTCATCAAGCTCATGAACGCAGCAGGGGCATTCGTAAGACCAAAAGACATCACTACAAATTCGTAATGCCCATACCTCGTTCGAAAAGCAGTCTTTGGCACATCCGTTGCCCATATTTTCAATTGATGATAACCGGATCTCAAGTCAATCTTAGAGAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATCAATGCGGGGAAGAGGATACTTGTTCTTTATGGTTACCTTGTTTAGTTGTCTGTAGTCTATACACATTCGAAAACTCCCATCCTTCTTCTTCACAAACAAAATCGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAGCCTTTGCTCAACAACTCTTGAAGTTGGGCTTTTAACTCCCTT</genome_strand>
        <mrna_strand>GAATCCCTTGACAAATCGGCGGTAGTAGCTAGCTAACCCAACAAAGCTCCTTATTTCTGACACATTAGTAGGTCTTACCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCACGTTCCCCAAGAAGGACACTACATCTAGCCAAAACTCACACTTAGAGAACTTGGCATAAAACTTTTTCTCCCTCAACATTTCCAATACCATTCTCAAATGCTCTTCATGTTCCTCCTTACTTTTAGAGTATATCAGTATATCATCAATAAATACGATCACAAAGAGATCCAAATATGGCTTAAAAATCCCTTTTATTAAACTCATAAACGCAGCAGGGGCATTCATAAGACCAAAAGACATCACTACAAATTTGTAATGCCCATACCTGGTTCTAAAAGCAGTCTTTGGCACATCCGTTGCCCGTATTTTCAATTGATGATAACCGGATCTCAAGTCAATCTTAGAAAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATTAATGCGAGGAAGAGGATACTTGTTCTTTATGGTTACCTTGTTNCACTGCCGGTAGCCTATGCACATCCGAAAACTCCAATCCTTCTTCTTTACAAACAAAACCGGAGCACCCCAAGGAGATGCAGTTGGTCTAATGAAGCCTTTGCTC-ACAACTCTTTGAAGTGGTCTTTTAACTCTCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E368762" ref_strand="+" ref_description="SGN-E368762 [TUS-22-P2]">
      <seq>gtctcacccaattcttcactgtctcaatcttacaaggatccaccatcactccatccttagaaaccacgtgccccaagaaggacactgcatctatccaaaactcacacttagagaacttggcataaagctttttctccctcaacatttctaatacaattctcaaatgctcctcatgttccttcttactattagagtatatcagtatatcatcaataaacatgatgacaaagagatccaaatatggcttaaaatcccgttcatcaagctcatgaacgcagcaggggcattcgtaagaccaaaagacatcactacaaattcgtaatgcccatacctggttctaaaagcagtctttggcacatccgttgcccgtattttcaattgatgataaccggatctcaagtcaatcttagagaagacacaagcaccttgtaactgatcgaacaagtcatcaatgcgaggaagtggatacttgttcttaatagttaccttgttcaactgccggtagtctatgcacatccgaaaactcccatccttcttcttcacaaaccaaaccggagcaccccaaggagatgcacttggtctaatgaagactttgctcaaaaactcttgaagttgggcctttaactctcttaactccgcgggagccattctataagggggtatagaaatggggcgagtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0101H16.1" temp_strand="-" temp_description="C02SLe0101H16.1  AC215444.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0101H16 sequenced_by:kribb upload_account_name:korea">
        <position start="16463" stop="15232"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16163" g_stop="15532" g_length="632"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="631" r_length="631" r_score="0.940"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0101H16.1" gen_strand="-" ref_id="SGN-E368762" ref_strand="+">
        <total_alignment_score>0.940</total_alignment_score>
        <cumulative_length_of_scored_exons>632</cumulative_length_of_scored_exons>
        <coverage percentage="0.931" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0101H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E368762" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16163" e_stop="15532"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCTCACCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCACGTGTCCCAAGAAGGACACTGCATCTAGCCAAAACTCACACTTAGAGAACTTGGCATAAAGCTTTTTCTCCCTTAACATTTCCAATACCATTCTCAAATGCTCTTCATGTTCCTTCTTGCTCTTTGAGTATACCAATATATCATCAATAAATACGATCACGAAGAGGTCCAAATATGGCTTAAAAATCCCGTTCATCAAGCTCATGAACGCAGCAGGGGCATTCGTAAGACCAAAAGACATCACTACAAATTCGTAATGCCCATACCTCGTTCGAAAAGCAGTCTTTGGCACATCCGTTGCCCATATTTTCAATTGATGATAACCGGATCTCAAGTCAATCTTAGAGAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATCAATGCGGGGAAGAGGATACTTGTTCTTTATGGTTACCTTGTTTAGTTGTCTGTAGTCTATACACATTCGAAAACTCCCATCCTTCTTCTTCACAAACAAAATCGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAGCCTTTGCTCAACAACTCTTGAAGTTGGGCTTTTAACTCCCTT</genome_strand>
        <mrna_strand>GTCTCACCCAATTCTTCACTGTCTCAATCTTACAAGGATCCACCATCACTCCATCCTTAGAAACCACGTGCCCCAAGAAGGACACTGCATCTATCCAAAACTCACACTTAGAGAACTTGGCATAAAGCTTTTTCTCCCTCAACATTTCTAATACAATTCTCAAATGCTCCTCATGTTCCTTCTTACTATTAGAGTATATCAGTATATCATCAATAAACATGATGACAAAGAGATCCAAATATGGCTT-AAAATCCCGTTCATCAAGCTCATGAACGCAGCAGGGGCATTCGTAAGACCAAAAGACATCACTACAAATTCGTAATGCCCATACCTGGTTCTAAAAGCAGTCTTTGGCACATCCGTTGCCCGTATTTTCAATTGATGATAACCGGATCTCAAGTCAATCTTAGAGAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATCAATGCGAGGAAGTGGATACTTGTTCTTAATAGTTACCTTGTTCAACTGCCGGTAGTCTATGCACATCCGAAAACTCCCATCCTTCTTCTTCACAAACCAAACCGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAGACTTTGCTCAAAAACTCTTGAAGTTGGGCCTTTAACTCTCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E375319" ref_strand="+" ref_description="SGN-E375319 [TUS-15-F18]">
      <seq>gaatcccttgacaaatcggcggtagtagctagctaacccaacaaagctccttatttctgacacattagtaggtcttacccaattcttcactgtctcaatcttagaaggatccaccatcactccatccttagaaaccacgttccccaagaaggacactacatctagccaaaactcacacttagagaacttggcataaaactttttctccctcaacatttccaataccattctcaaatgctcttcatgttcctccttacttttagagtatatcagtatatcatcaataaatacgatcacaaagagatccaaatatggcttaaaaatcccttttattaaactcataaacgcagcaggggcattcataagaccaaaagacatcactacaaatttgtaatgcccatacctggttctaaaagcagtctttggcacatccgttgcccgtattttcaattgatgataaccggatctcaagtcaatcttagaaaagacacaagcaccttgtaactgatcgaacaagtcattaatgcgaggaagaggatacttgttctttatggttaccttgttcaactgccggtagcctatgcacatccgaaaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0101H16.1" temp_strand="-" temp_description="C02SLe0101H16.1  AC215444.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0101H16 sequenced_by:kribb upload_account_name:korea">
        <position start="16534" stop="15339"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16234" g_stop="15639" g_length="596"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="596" r_length="596" r_score="0.935"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0101H16.1" gen_strand="-" ref_id="SGN-E375319" ref_strand="+">
        <total_alignment_score>0.935</total_alignment_score>
        <cumulative_length_of_scored_exons>596</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0101H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E375319" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16234" e_stop="15639"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAATCCCTTGACGAATCGACGGTAGTAGCTAGCTAACCCAACAAAGCTCGTTATTTCTAACACATTAGTAGGTCTCACCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCACGTGTCCCAAGAAGGACACTGCATCTAGCCAAAACTCACACTTAGAGAACTTGGCATAAAGCTTTTTCTCCCTTAACATTTCCAATACCATTCTCAAATGCTCTTCATGTTCCTTCTTGCTCTTTGAGTATACCAATATATCATCAATAAATACGATCACGAAGAGGTCCAAATATGGCTTAAAAATCCCGTTCATCAAGCTCATGAACGCAGCAGGGGCATTCGTAAGACCAAAAGACATCACTACAAATTCGTAATGCCCATACCTCGTTCGAAAAGCAGTCTTTGGCACATCCGTTGCCCATATTTTCAATTGATGATAACCGGATCTCAAGTCAATCTTAGAGAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATCAATGCGGGGAAGAGGATACTTGTTCTTTATGGTTACCTTGTTTAGTTGTCTGTAGTCTATACACATTCGAAAAC</genome_strand>
        <mrna_strand>GAATCCCTTGACAAATCGGCGGTAGTAGCTAGCTAACCCAACAAAGCTCCTTATTTCTGACACATTAGTAGGTCTTACCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCACGTTCCCCAAGAAGGACACTACATCTAGCCAAAACTCACACTTAGAGAACTTGGCATAAAACTTTTTCTCCCTCAACATTTCCAATACCATTCTCAAATGCTCTTCATGTTCCTCCTTACTTTTAGAGTATATCAGTATATCATCAATAAATACGATCACAAAGAGATCCAAATATGGCTTAAAAATCCCTTTTATTAAACTCATAAACGCAGCAGGGGCATTCATAAGACCAAAAGACATCACTACAAATTTGTAATGCCCATACCTGGTTCTAAAAGCAGTCTTTGGCACATCCGTTGCCCGTATTTTCAATTGATGATAACCGGATCTCAAGTCAATCTTAGAAAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATTAATGCGAGGAAGAGGATACTTGTTCTTTATGGTTACCTTGTTCAACTGCCGGTAGCCTATGCACATCCGAAAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E204434" ref_strand="+" ref_description="SGN-E204434 [cLEC-13-J16]">
      <seq>gaatcccttgacaaatcggcggtagtagctagctaacccaacaaagctccttatttctgacacattagtaggtcttacccaattcttcactgtctcaatcttagaaggatccaccatcactccatccttagaaaccacgttccccaagaaggacactacatctagccaaaactcacacttagagaacttggcataaaactttttctccctcaacatttccaataccattctcaaatgctcttcatgttcctccttacttttagagtatatcagtatatcatcaataaatacgatcacaaagagatccaaatatggcttaaaaatcccttttattaaactcataaacgcagcaggggcattcataagaccaaaagacatcactacaaatttgtaatgcccatacctggttctaaaagcagtctttggcacatccgttgcccgtattttcaattgatgataaccggatctcaagtcaatcttagaaaagacacaagcaccttgtaactgatcgaacaagtcattaatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0101H16.1" temp_strand="-" temp_description="C02SLe0101H16.1  AC215444.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0101H16 sequenced_by:kribb upload_account_name:korea">
        <position start="16534" stop="15409"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16234" g_stop="15709" g_length="526"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="526" r_length="526" r_score="0.943"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0101H16.1" gen_strand="-" ref_id="SGN-E204434" ref_strand="+">
        <total_alignment_score>0.943</total_alignment_score>
        <cumulative_length_of_scored_exons>526</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0101H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E204434" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16234" e_stop="15709"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAATCCCTTGACGAATCGACGGTAGTAGCTAGCTAACCCAACAAAGCTCGTTATTTCTAACACATTAGTAGGTCTCACCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCACGTGTCCCAAGAAGGACACTGCATCTAGCCAAAACTCACACTTAGAGAACTTGGCATAAAGCTTTTTCTCCCTTAACATTTCCAATACCATTCTCAAATGCTCTTCATGTTCCTTCTTGCTCTTTGAGTATACCAATATATCATCAATAAATACGATCACGAAGAGGTCCAAATATGGCTTAAAAATCCCGTTCATCAAGCTCATGAACGCAGCAGGGGCATTCGTAAGACCAAAAGACATCACTACAAATTCGTAATGCCCATACCTCGTTCGAAAAGCAGTCTTTGGCACATCCGTTGCCCATATTTTCAATTGATGATAACCGGATCTCAAGTCAATCTTAGAGAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATCAATG</genome_strand>
        <mrna_strand>GAATCCCTTGACAAATCGGCGGTAGTAGCTAGCTAACCCAACAAAGCTCCTTATTTCTGACACATTAGTAGGTCTTACCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCACGTTCCCCAAGAAGGACACTACATCTAGCCAAAACTCACACTTAGAGAACTTGGCATAAAACTTTTTCTCCCTCAACATTTCCAATACCATTCTCAAATGCTCTTCATGTTCCTCCTTACTTTTAGAGTATATCAGTATATCATCAATAAATACGATCACAAAGAGATCCAAATATGGCTTAAAAATCCCTTTTATTAAACTCATAAACGCAGCAGGGGCATTCATAAGACCAAAAGACATCACTACAAATTTGTAATGCCCATACCTGGTTCTAAAAGCAGTCTTTGGCACATCCGTTGCCCGTATTTTCAATTGATGATAACCGGATCTCAAGTCAATCTTAGAAAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATTAATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E240817" ref_strand="+" ref_description="SGN-E240817 [cLED-24-J5]">
      <seq>gtctcacccatttcttcactgtctcaatcttaccaggatccaccatcactccatccttagaaaccacgtgccccaagaaggacactgcatctatccaaaactcacacttagagaacttggcataaagctttttctccctcaacatttctaatacaattctcaaatgctcctcatgttccttcttactattagaggatatcagtatatcatcaatgaacatgatgacgcagagatccaaatatggcttaaaatcccgttcatcaagctcatgaacgcagcaggggcattcgtaagaccaaaagacatcactacaaattcgtaatgcccatacctggttctaaaagcagtctttggcaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0101H16.1" temp_strand="-" temp_description="C02SLe0101H16.1  AC215444.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0101H16 sequenced_by:kribb upload_account_name:korea">
        <position start="16463" stop="15505"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16163" g_stop="15805" g_length="359"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="358" r_length="358" r_score="0.933"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0101H16.1" gen_strand="-" ref_id="SGN-E240817" ref_strand="+">
        <total_alignment_score>0.933</total_alignment_score>
        <cumulative_length_of_scored_exons>359</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0101H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E240817" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16163" e_stop="15805"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCTCACCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCACGTGTCCCAAGAAGGACACTGCATCTAGCCAAAACTCACACTTAGAGAACTTGGCATAAAGCTTTTTCTCCCTTAACATTTCCAATACCATTCTCAAATGCTCTTCATGTTCCTTCTTGCTCTTTGAGTATACCAATATATCATCAATAAATACGATCACGAAGAGGTCCAAATATGGCTTAAAAATCCCGTTCATCAAGCTCATGAACGCAGCAGGGGCATTCGTAAGACCAAAAGACATCACTACAAATTCGTAATGCCCATACCTCGTTCGAAAAGCAGTCTTTGGCACA</genome_strand>
        <mrna_strand>GTCTCACCCATTTCTTCACTGTCTCAATCTTACCAGGATCCACCATCACTCCATCCTTAGAAACCACGTGCCCCAAGAAGGACACTGCATCTATCCAAAACTCACACTTAGAGAACTTGGCATAAAGCTTTTTCTCCCTCAACATTTCTAATACAATTCTCAAATGCTCCTCATGTTCCTTCTTACTATTAGAGGATATCAGTATATCATCAATGAACATGATGACGCAGAGATCCAAATATGGCTT-AAAATCCCGTTCATCAAGCTCATGAACGCAGCAGGGGCATTCGTAAGACCAAAAGACATCACTACAAATTCGTAATGCCCATACCTGGTTCTAAAAGCAGTCTTTGGCACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E577888" ref_strand="+" ref_description="SGN-E577888 [LE08BA01]">
      <seq>ctacatctcctaccatacaatgcttcaaatggagccatatcaatgcttgattgatagctattattgtatgaaaactccgctaagggtaggaagctatcccaatgaccaccaaactctatcacacacgcacgaagcatattctccaacacttgaatcgttcgctcagactgaccatcgggagaactagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0101H16.1" temp_strand="-" temp_description="C02SLe0101H16.1  AC215444.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0101H16 sequenced_by:kribb upload_account_name:korea">
        <position start="18015" stop="17238"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17715" g_stop="17539" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="177" r_length="177" r_score="0.932"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0101H16.1" gen_strand="-" ref_id="SGN-E577888" ref_strand="+">
        <total_alignment_score>0.932</total_alignment_score>
        <cumulative_length_of_scored_exons>177</cumulative_length_of_scored_exons>
        <coverage percentage="0.941" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0101H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E577888" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17715" e_stop="17539"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTACATCTCCTCCCATATAATGCTTCAAATGGGGTCATATCAATGCTCGAGTGATAGCTATTATTGTATGAAAATTCCGCTAAGGGTAAGAAGCTATCCCAATGGCCACCAAATTCTATCACACACGCACGGAGCATATCCTCCAACACTTGAATCGTTCGCTCAGACTGACCATCG</genome_strand>
        <mrna_strand>CTACATCTCCTACCATACAATGCTTCAAATGGAGCCATATCAATGCTTGATTGATAGCTATTATTGTATGAAAACTCCGCTAAGGGTAGGAAGCTATCCCAATGACCACCAAACTCTATCACACACGCACGAAGCATATTCTCCAACACTTGAATCGTTCGCTCAGACTGACCATCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E354383" ref_strand="+" ref_description="SGN-E354383 [cTOS-17-A14]">
      <seq>agattcgatggagaaagtgaagtctattcaagaaaagcttctagcggcgcaaagtagacaaaaagaatatgcagatcgaaaggttagagacttagagttcatggagggcgaacaagtcttgttgaaagtctcgccaatgaaaggggtgatgcggtttcgtaaaagaggtaagttaagtccaaggtatattggaccatttgaggtactaaagcgagtaggggaggtggcttatgaattagccttacctccagggctgtccggagtacatccggtatttcatgtatccatgttgaaaagataccatggagatggaaactacatcatccgttgggattcagtttcgcttggtgagaattggacttatgaggaggaaccagttgctattttagatagagaggttcgcaagttgaggtcgagagaaattgcatccatcaaagttcaatggaagaatcgaccggttgaagaagctacttgggagaaggaggcagatatgcaagaaaaatacccacatctgtttacagattcaggtactccttttcgccattgtttttcttcatttgatcgttcggggacgaacgatgggtaaattggtatctattgtaacgacctgtttagtcgttttgagcagcagattttaattctggaaaaactggccaagaccacgggcactgcgacggaccgtcacaggcacgacggcccgtcgaaggtgcatcgtttcagcatacttagaatttctgaatttggatatgaaaatcgactctct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0101H16.1" temp_strand="+" temp_description="C02SLe0101H16.1  AC215444.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0101H16 sequenced_by:kribb upload_account_name:korea">
        <position start="17477" stop="18838"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17776" g_stop="18538" g_length="763"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="763" r_length="763" r_score="0.902"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0101H16.1" gen_strand="+" ref_id="SGN-E354383" ref_strand="+">
        <total_alignment_score>0.902</total_alignment_score>
        <cumulative_length_of_scored_exons>763</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0101H16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E354383" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17776" e_stop="18538"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGATTCGATGGAAAAAGTGAAGTCTATTCAAGAAAAGCTGTTAGCGGCGCAAAGTAGACAAAAAGAATATGCAGATCGAAAGGTTAGAGACTTAGAGTTCATGGAAGGTGAACAAGTCTTGTTGAAAGTTTCGCCAATGAAAGGGGTGATGCGATTTGGAAAAAGGGGTAAGCTAAGTCCAAGGTACATTGGTCCCTTTGAAGTACTAAAGCGAGTAGGAGAGGTGGCTTATGAGTTAGCCTTGCCTCCAGGGCTGTCCGGAGTACATCCGGTATTCCATGTGTCTATGTTGAAAAGATACCACGGAGATGGAAACTACATTATCCGTTGGGATTCAGTTTTGCTTGATGAGAACTTGTCTTATGAGGAGGAGCCTGTTGCTATTTTAGATAGAGAAGTTCGCAAGTTGAGGTCAAGAGAGATTGCATTCATCAATGTGCAATGGAAGAATCGACCGTTTGAAGAAGCCACTTGGGAGAAGGAGGCGGATATGCGAGAAAAATACCCACATCTGTTTACAGATTCAGGTACTCCTTTTCGCCCTTGTTTTCCTTCCTTTGATCGTTCGGGGACGAACGATGGGTAAATTGGTATCTAATGTAACGACCCGTTTAGTCGTTTTGAGCAACAGACTTCAATTCTGGAAAAACTGGCAGAAGCGACGGACCCCACGACGGAACGTCATGGGCACGACGGACCGTCGCAGG-GTCTCGTTTCAAAACACTTAGAAAATCTGAAATTGGGTACTGAAAATCGACTCTCT</genome_strand>
        <mrna_strand>AGATTCGATGGAGAAAGTGAAGTCTATTCAAGAAAAGCTTCTAGCGGCGCAAAGTAGACAAAAAGAATATGCAGATCGAAAGGTTAGAGACTTAGAGTTCATGGAGGGCGAACAAGTCTTGTTGAAAGTCTCGCCAATGAAAGGGGTGATGCGGTTTCGTAAAAGAGGTAAGTTAAGTCCAAGGTATATTGGACCATTTGAGGTACTAAAGCGAGTAGGGGAGGTGGCTTATGAATTAGCCTTACCTCCAGGGCTGTCCGGAGTACATCCGGTATTTCATGTATCCATGTTGAAAAGATACCATGGAGATGGAAACTACATCATCCGTTGGGATTCAGTTTCGCTTGGTGAGAATTGGACTTATGAGGAGGAACCAGTTGCTATTTTAGATAGAGAGGTTCGCAAGTTGAGGTCGAGAGAAATTGCATCCATCAAAGTTCAATGGAAGAATCGACCGGTTGAAGAAGCTACTTGGGAGAAGGAGGCAGATATGCAAGAAAAATACCCACATCTGTTTACAGATTCAGGTACTCCTTTTCGCCATTGTTTTTCTTCATTTGATCGTTCGGGGACGAACGATGGGTAAATTGGTATCTATTGTAACGACCTGTTTAGTCGTTTTGAGCAGCAGATTTTAATTCTGGAAAAACTGGCCAAGACCACGGGCACTGCGACGGACCGTCACAGGCACGACGGCCCGTCGAAGGTGCATCGTTTCAGCATACTTAGAATTTCTGAATTTGGATA-TGAAAATCGACTCTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E737838" ref_strand="+" ref_description="SGN-E737838 [LC11BG01]">
      <seq>cccccgggctgcaggattgttgtagattccatctaagaattgtattatcttatgaatgctacatggttggttttagttataattgcaaacatcgaaatttcaaaatataagaccgcgatttcgccaaatttttattgcaataattatcagtattatgtggaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0101H16.1" temp_strand="-" temp_description="C02SLe0101H16.1  AC215444.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0101H16 sequenced_by:kribb upload_account_name:korea">
        <position start="25596" stop="24848"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="25309" g_stop="25140" g_length="170"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="170" r_length="170" r_score="0.900"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0101H16.1" gen_strand="-" ref_id="SGN-E737838" ref_strand="+">
        <total_alignment_score>0.900</total_alignment_score>
        <cumulative_length_of_scored_exons>170</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0101H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E737838" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="25309" e_stop="25140"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAACGTTCTAATGAATTGTTGTAGATTCCATCTAAGAATTGTATTATCTTATGAATGCTACATGGTTGGTTTTAGTTATAATTGCAAACATCGAAATTTCAAAATATAAGACCGCGATTTCGCCAAATTTTTATTGCAATAATTATCAGTATTATGTGGCATTGGAGAT</genome_strand>
        <mrna_strand>CCCCCGGGCTGCAGGATTGTTGTAGATTCCATCTAAGAATTGTATTATCTTATGAATGCTACATGGTTGGTTTTAGTTATAATTGCAAACATCGAAATTTCAAAATATAAGACCGCGATTTCGCCAAATTTTTATTGCAATAATTATCAGTATTATGTGGAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E735675" ref_strand="+" ref_description="SGN-E735675 [LC02CC01]">
      <seq>ttgttgtagattccatctaagaattgtattatcttatgaatgctacatggattggttttagttataattgcaaacatcgaaatttcaaaatataagaccgcgatttcgccagatttttattgcaataattatcagtattatgtggaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0101H16.1" temp_strand="-" temp_description="C02SLe0101H16.1  AC215444.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0101H16 sequenced_by:kribb upload_account_name:korea">
        <position start="25593" stop="24848"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="25293" g_stop="25140" g_length="154"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="155" r_length="155" r_score="0.935"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0101H16.1" gen_strand="-" ref_id="SGN-E735675" ref_strand="+">
        <total_alignment_score>0.935</total_alignment_score>
        <cumulative_length_of_scored_exons>154</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0101H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E735675" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="25293" e_stop="25140"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGTTGTAGATTCCATCTAAGAATTGTATTATCTTATGAATGCTACATGG-TTGGTTTTAGTTATAATTGCAAACATCGAAATTTCAAAATATAAGACCGCGATTTCGCCAAATTTTTATTGCAATAATTATCAGTATTATGTGGCATTGGAGAT</genome_strand>
        <mrna_strand>TTGTTGTAGATTCCATCTAAGAATTGTATTATCTTATGAATGCTACATGGATTGGTTTTAGTTATAATTGCAAACATCGAAATTTCAAAATATAAGACCGCGATTTCGCCAGATTTTTATTGCAATAATTATCAGTATTATGTGGAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E735427" ref_strand="+" ref_description="SGN-E735427 [LC01CC01]">
      <seq>ttgttgtagattccatctaagaattgtattatcttatgaatgctacatggttggttttagttataattgcaaacatcgaaatttcaaaatataagaccgcgatttcgccaaatttttattgcaataattatcagtattatgtggaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0101H16.1" temp_strand="-" temp_description="C02SLe0101H16.1  AC215444.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0101H16 sequenced_by:kribb upload_account_name:korea">
        <position start="25593" stop="24848"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="25293" g_stop="25140" g_length="154"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="154" r_length="154" r_score="0.955"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0101H16.1" gen_strand="-" ref_id="SGN-E735427" ref_strand="+">
        <total_alignment_score>0.955</total_alignment_score>
        <cumulative_length_of_scored_exons>154</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0101H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E735427" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="25293" e_stop="25140"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGTTGTAGATTCCATCTAAGAATTGTATTATCTTATGAATGCTACATGGTTGGTTTTAGTTATAATTGCAAACATCGAAATTTCAAAATATAAGACCGCGATTTCGCCAAATTTTTATTGCAATAATTATCAGTATTATGTGGCATTGGAGAT</genome_strand>
        <mrna_strand>TTGTTGTAGATTCCATCTAAGAATTGTATTATCTTATGAATGCTACATGGTTGGTTTTAGTTATAATTGCAAACATCGAAATTTCAAAATATAAGACCGCGATTTCGCCAAATTTTTATTGCAATAATTATCAGTATTATGTGGAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E702841" ref_strand="+" ref_description="SGN-E702841 [FA19DD05]">
      <seq>gagacgtggagagagggagttccctaaagacagggagcatgcaagggatgttgggagcactgctgatggtccttccctgaaacccaaatctaaagctccgtcgagctcgagccgtccccgccaacctgagaggccttccccagaccttgaccaccgcgttgatgaccaccgccgacctgagagaccatcgccagatcttgaccaccgccgccgagctgagaggccatcgccagaccttgaccaccgccgccgatctgagaggccatcgccagaccatgattacccccgccgacctgagaggctgtctccagatcgccgattgcgtgaccctgaacttcctcgcccttcttccaagaaaaagtatgaagattatgacgatcatcaccatgaggaccgccaccgccatgaggaccgccatcagcgcggtacccatcgcagtagcagtagccatcaccgttcagaatcttcagctaacgccaaaccatcctccgtaggcccatctgaaccgcaatccaaatccgttgataagaggaaggccagtgttttttctcgtatcagtttcccagccgaagattcagcagcagcttcaaagaagcgaaaggtgccatcctcgagtgaagtaccagtgagttcttcagcgagccacaggggtggcacaacgaatgggtatcatggggagtacaaaacgactactggatcaaggaagagtgccactgtgagtgtggattacgagagtagtgatgatgatcggcacttcaaaagaaagccttcaaggttgagatagtatatgatgatggggtgactggatcaaaaagaatcttgcatggatataaatacagattcagaatgcgcgggcatctttttaacattcaaatctgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0101H16.1" temp_strand="-" temp_description="C02SLe0101H16.1  AC215444.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0101H16 sequenced_by:kribb upload_account_name:korea">
        <position start="29261" stop="25133"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28961" g_stop="28947" g_length="15"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="15" r_length="15" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="28946" i_stop="28584" i_length="363">
            <donor d_prob="0.953" d_score="0.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28583" g_stop="28508" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="16" r_stop="91" r_length="76" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28507" i_stop="27366" i_length="1142">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.927" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="27365" g_stop="26683" g_length="683"/>
          <reference_exon_boundary r_type="cDNA" r_start="92" r_stop="774" r_length="683" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="26682" i_stop="25671" i_length="1012">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="25670" g_stop="25606" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="775" r_stop="839" r_length="65" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="25605" i_stop="25473" i_length="133">
            <donor d_prob="0.770" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="25472" g_stop="25433" g_length="40"/>
          <reference_exon_boundary r_type="cDNA" r_start="840" r_stop="879" r_length="40" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0101H16.1" gen_strand="-" ref_id="SGN-E702841" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>879</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0101H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E702841" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28961" e_stop="28947"/>
          <exon e_start="28583" e_stop="28508"/>
          <exon e_start="27365" e_stop="26683"/>
          <exon e_start="25670" e_stop="25606"/>
          <exon e_start="25472" e_stop="25433"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGACGTGGAGAGAGGTAATTTGACCATTCTTGTTAATTCGTAGCACATTATGGTGCTCTTTCCGTGGGTGATGTTAAATCACATCCAGTGGTCTGAGCACTATGCATTGAGGTTTTGCAAAGAATTTACATGTAGATGATATTGAAATTATGATCACTTGTTGAGCTTTGAGTAGAGGTTTTTGCGCTCTGTTTACTCCTAGTGCTTCCGTATAACTTAGGTTTTCTATACTTGGTAGTCACGTTGCTATCAATTTGCACAATCTATTTATATCCTCCTTAGTAGGTTATTATTGTCAACAGTCATCGTCTTTTCTGCTTCTACTCTTTTGATCACCTTCAATGACAATTTGATAATATATTTGTTATTTTCAGCAGGGAGTTCCCTAAAGACAGGGAGCATGCAAGGGATGTTGGGAGCACTGCTGATGGTCCTTCCCTGAAACCCAAATCTGTATGTATCTTGATCATCAAATATTATAGGCCATTTTGGCCCTATATTTTAGTTGACATGCTGTGTGTGAGGGGAAAAGTTTGGCTTGGTTTAGCCAAGAAGCAGCTAACAGCTAGTTTCCAGTTTCATCTTTCTATTACATGTAAAAGTAAAAAAATCAACAGTATTGGAGACTGAATTTCTTGGATAATTTTCTAAGATCATAAGTACAGGACACATTTCTTTGGATTACCTTGATATCTTGACGATTGAGTGTATTGGAGATCAGTTGCCCATTATGCAAAAAGGGGATATATGACTTTCTACCGTAGTTGGTGCTCCTTTCGAATGCCTGATGTTGCTTGATGGCAAACGATATTGTGGCAGTTTTTTGTTGCCGGGCAGTTGACTGGAGCTCAATTTTTAGGAGCTATCAGAACAGTACCCATTAAGATGTTGGTTTATATTTTTTGTTAGTTCGTTTTTCTGGTTTCTGTTCATTGGATGTGGTGGATGATGATAAGTGATTTTGTTCCCTTATGTACCTCCCTCTTTTTTTAAAAAAATAAACCATTTCCCAACAGCATCGAGATTTGGCTATTGCAGAAACGTTTTATGATGATGTTTGCCTAATTTGACAAAAATGATGAAGTGGATAGGACTCCAGAAGTGTTCTTAAGTCTAGACTTGGAAACAAAAGAATCATTGAGTGGAGTGGGAGATGGTGATGTAAATCATCTTATAACAAAAATGGAGTGGCATTTTACGGGTCCCCATAAATGTACACGAAGGTGTATTGATTTTAAATATTTGCTACACCTCTTAAAATTAAAAGAAAAACCAAGTGCAGAAAAAAGAACTCAAACTGAGGAAATCCTTTTGAAAACTCAACCTGAGTTGAAGAGCCTATTGTTAAGAGTTTTAAATTTCTTGGTTATCAAATAAATAATTAAGGAGATGTAAATTTATTTCTCAAGAAAAATATTTCTTGTAAAATTTAATGTCATCTCCTTTTGTAGTGTGTATTTCCGTCAATGTTATTTTTTTTTTGAATAGCTGTGAATTTCTCATTTCTTTTTATGGCTTTAGACCTGCATTGCATTTTTGACTCTTCTTTGTTTTTGCAATAGTTGATATTAATATGTACATTGATGATTCCACAGAAAGCTCCGTCGAGCTCGAGCCGTCCCCGCCAACCTGAGAGGCCTTCCCCAGACCTTGACCACCGCGTTGATGACCACCGCCGACCTGAGAGACCATCGCCAGATCTTGACCACCGCCGCCGAGCTGAGAGGCCATCGCCAGACCTTGACCACCGCCGCCGATCTGAGAGGCCATCGCCAGACCATGATTACCCCCGCCGACCTGAGAGGCTGTCTCCAGATCGCCGATTGCGTGACCCTGAACTTCCTCGCCCTTCTTCCAAGAAAAAGTATGAAGATTATGACGATCATCACCATGAGGACCGCCACCGCCATGAGGACCGCCATCAGCGCGGTACCCATCGCAGTAGCAGTAGCCATCACCGTTCAGAATCTTCAGCTAACGCCAAACCATCCTCCGTAGGCCCATCTGAACCGCAATCCAAATCCGTTGATAAGAGGAAGGCCAGTGTTTTTTCTCGTATCAGTTTCCCAGCCGAAGATTCAGCAGCAGCTTCAAAGAAGCGAAAGGTGCCATCCTCGAGTGAAGTACCAGTGAGTTCTTCAGCGAGCCACAGGGGTGGCACAACGAATGGGTATCATGGGGAGTACAAAACGACTACTGGATCAAGGAAGAGTGCCACTGTGAGTGTGGATTACGAGAGTAGTGATGATGATCGGCACTTCAAAAGAAAGCCTTCAAGGTACGAACCATCTCCGCCACCAGCTTTTGTAGGGTGGGAAGAAGAGGAGCAGGAGGGGCCTCCTCCTAGGCATAACAAAGGGGACTAGGGGAAGGGGGTAATCTGCATATAAGTTATGTTTGCATTTTTCACATCTTTACTATGTCAATTATTTGCGTTTCACTTGTAGCACTATACTGGGGTATGTTGTTGTTGTTGACTTTCTAATGTGTCAGTTCACCATTTTCTTGGGTTCTTTCCAGCTATTCTGTTGGTAGATTTTGATGCAATACTGTGCAATATTTAGAGTTGAATGTACGTATATTGCTTTGAATCTCTTTTTTGTTTCTCATTTCCTTGTCGTGTCTTCATTTGTGCATTATGTATTAGTTTTACTGTCTTGGCAAAAAAATATGTTACTGGCTTAACTGTCTTAAATGTAGCTTTACTTACCTAGGTTTGTTTATCTAAGGAACACAACAGTTAGGGGCTTATAGTTAATATGAGTCTCGTTTGTCATGCTAACAAAAAAGCATCTGGTTAGTTATGAACATTGTTGGCTTAACCTCTCTGGCAACCTGTCTTATGATATTTATTATAATATATTTCTTTAGCTGGCAGAATTCTGAATGTCAAAATAATTCATGGGAAGGAAGAGAATAAAGAGAAAAATATAGACGTCTCTACTTTGCTTTGTACATATAACTTATCTAGAGGAGCCTGCACAGGTTCACTTGCATGCCTTTTAGTTCGACAGTTGTATGTTAATTTTGTCACCAAGTATTGTGAGTGAGAATATCACTTTGAAGCTTTGATGGGAACAATCTCATATTGTATGTGGCATTATATTCACTTGTATCTCTTTTAAATTGTTGCTAAGTCATTTTTGTTTGAGATGCCAGTGGAGTTCTTTTGTGTGTTTAGCCTCTTCATTATTGAGTACAGCTATCCTTCTACCATTCCTGTCATAGCTTTCATAATGTCCTTGTGGTCCTTTTTCTACGTATGCTTAACTCGTTGGTTCTCGGTGCAGGTTGAGATAGTATATGATGATGGGGTGACTGGATCAAAAAGAATCTTGCATGGATATAAATACAGGTAGAGAGTAGTTCGCTCTTGTTCAGACATTTTTCACATATTTGCCTCAGACAATGCTATTACTCTCACTTACATGCCTTGCTGTTTCACCTCGTTTCGTTTTGAGTTGACATTTTGTTTGATTGGGGTGCAGATTCAGAATGCGCGGGCATCTTTTTAACATTCAAATCTGG</genome_strand>
        <mrna_strand>GAGACGTGGAGAGAG...........................................................................................................................................................................................................................................................................................................................................................................GGAGTTCCCTAAAGACAGGGAGCATGCAAGGGATGTTGGGAGCACTGCTGATGGTCCTTCCCTGAAACCCAAATCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGCTCCGTCGAGCTCGAGCCGTCCCCGCCAACCTGAGAGGCCTTCCCCAGACCTTGACCACCGCGTTGATGACCACCGCCGACCTGAGAGACCATCGCCAGATCTTGACCACCGCCGCCGAGCTGAGAGGCCATCGCCAGACCTTGACCACCGCCGCCGATCTGAGAGGCCATCGCCAGACCATGATTACCCCCGCCGACCTGAGAGGCTGTCTCCAGATCGCCGATTGCGTGACCCTGAACTTCCTCGCCCTTCTTCCAAGAAAAAGTATGAAGATTATGACGATCATCACCATGAGGACCGCCACCGCCATGAGGACCGCCATCAGCGCGGTACCCATCGCAGTAGCAGTAGCCATCACCGTTCAGAATCTTCAGCTAACGCCAAACCATCCTCCGTAGGCCCATCTGAACCGCAATCCAAATCCGTTGATAAGAGGAAGGCCAGTGTTTTTTCTCGTATCAGTTTCCCAGCCGAAGATTCAGCAGCAGCTTCAAAGAAGCGAAAGGTGCCATCCTCGAGTGAAGTACCAGTGAGTTCTTCAGCGAGCCACAGGGGTGGCACAACGAATGGGTATCATGGGGAGTACAAAACGACTACTGGATCAAGGAAGAGTGCCACTGTGAGTGTGGATTACGAGAGTAGTGATGATGATCGGCACTTCAAAAGAAAGCCTTCAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGAGATAGTATATGATGATGGGGTGACTGGATCAAAAAGAATCTTGCATGGATATAAATACAG.....................................................................................................................................ATTCAGAATGCGCGGGCATCTTTTTAACATTCAAATCTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E704311" ref_strand="+" ref_description="SGN-E704311 [FA23DG07]">
      <seq>acatgatccatttggcggacaaggttttatgctgcctttcggtcctccgatgcagagggaccttgcagcagactttgggatgggatttaatgctggcccaccaatcatgagtagagaagaatttgaggctagaaaggctgatctgagaaggaaacgtgagagcgagagacgtggagagagggagttccctaaagacagggagcatgcaagggatgttgggagcactgctgatggtccttccctgaaacccaaatctaaagctccgtcgagctcgagccgtccccgccaacctgagaggccttccccagaccttgaccaccgcgttgatgaccaccgccgacctgagagaccatcgccagatcttgaccaccgccgccgagctgagaggccatcgccagaccttgaccaccgccgccgatctgagaggccatcgccagaccatgattacccccgccgacctgagaggctgtctccagatcgccgattgcgtgaccctgaacttcctcgcccttcttccaagaaaaagtatgaagattatgacgatcatcaccatgaggaccgccaccgccatgaggaccgccatcagcgcggtacccatcgcagtagcagtagccatcaccgttcagaatcttcagctaacgccaaaccatcctccgtaggcccatctgaaccgcaatccaaatccgttgataagaggaaggccagtgttttttctcgtatcagtttcccagccgaagattcagcagcagcttcaaagaagcgaaaggtgccatcctcgagtgaagtaccagtgagttcttcagcgagccacaggggtggcacaacgaatgggtatcatggggagtacaaaacgactac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0101H16.1" temp_strand="-" temp_description="C02SLe0101H16.1  AC215444.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0101H16 sequenced_by:kribb upload_account_name:korea">
        <position start="29701" stop="26464"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29401" g_stop="29345" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="57" r_length="57" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29344" i_stop="29070" i_length="275">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29069" g_stop="28947" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="58" r_stop="180" r_length="123" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28946" i_stop="28584" i_length="363">
            <donor d_prob="0.953" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="28583" g_stop="28508" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="181" r_stop="256" r_length="76" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="28507" i_stop="27366" i_length="1142">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.927" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="27365" g_stop="26764" g_length="602"/>
          <reference_exon_boundary r_type="cDNA" r_start="257" r_stop="858" r_length="602" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0101H16.1" gen_strand="-" ref_id="SGN-E704311" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>858</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0101H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E704311" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29401" e_stop="29345"/>
          <exon e_start="29069" e_stop="28947"/>
          <exon e_start="28583" e_stop="28508"/>
          <exon e_start="27365" e_stop="26764"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACATGATCCATTTGGCGGACAAGGTTTTATGCTGCCTTTCGGTCCTCCGATGCAGAGGTAATAACCTCCATTGTATTTTATTCTAAACTTCTTATGCTGTCTTTCGGTCCTCCAATGCAGAGGTATAACTTCCATTGTATTTTATTCTAAACTTCTCTCTGTTTAATCTCTGATAAGTATTTTCACATGTTTTCGGGTCTCTCTTGCAGTTTCTGATGATGGTCATATATTGTAGTTTAATTACTTCTATATTAGAGTATCTGTATACAAATATGTTGGCGCATTTGCGATTAGTGGTACCTGACTGGATAAAATTGGCCACCAAATTTTAGGGACCTTGCAGCAGACTTTGGGATGGGATTTAATGCTGGCCCACCAATCATGAGTAGAGAAGAATTTGAGGCTAGAAAGGCTGATCTGAGAAGGAAACGTGAGAGCGAGAGACGTGGAGAGAGGTAATTTGACCATTCTTGTTAATTCGTAGCACATTATGGTGCTCTTTCCGTGGGTGATGTTAAATCACATCCAGTGGTCTGAGCACTATGCATTGAGGTTTTGCAAAGAATTTACATGTAGATGATATTGAAATTATGATCACTTGTTGAGCTTTGAGTAGAGGTTTTTGCGCTCTGTTTACTCCTAGTGCTTCCGTATAACTTAGGTTTTCTATACTTGGTAGTCACGTTGCTATCAATTTGCACAATCTATTTATATCCTCCTTAGTAGGTTATTATTGTCAACAGTCATCGTCTTTTCTGCTTCTACTCTTTTGATCACCTTCAATGACAATTTGATAATATATTTGTTATTTTCAGCAGGGAGTTCCCTAAAGACAGGGAGCATGCAAGGGATGTTGGGAGCACTGCTGATGGTCCTTCCCTGAAACCCAAATCTGTATGTATCTTGATCATCAAATATTATAGGCCATTTTGGCCCTATATTTTAGTTGACATGCTGTGTGTGAGGGGAAAAGTTTGGCTTGGTTTAGCCAAGAAGCAGCTAACAGCTAGTTTCCAGTTTCATCTTTCTATTACATGTAAAAGTAAAAAAATCAACAGTATTGGAGACTGAATTTCTTGGATAATTTTCTAAGATCATAAGTACAGGACACATTTCTTTGGATTACCTTGATATCTTGACGATTGAGTGTATTGGAGATCAGTTGCCCATTATGCAAAAAGGGGATATATGACTTTCTACCGTAGTTGGTGCTCCTTTCGAATGCCTGATGTTGCTTGATGGCAAACGATATTGTGGCAGTTTTTTGTTGCCGGGCAGTTGACTGGAGCTCAATTTTTAGGAGCTATCAGAACAGTACCCATTAAGATGTTGGTTTATATTTTTTGTTAGTTCGTTTTTCTGGTTTCTGTTCATTGGATGTGGTGGATGATGATAAGTGATTTTGTTCCCTTATGTACCTCCCTCTTTTTTTAAAAAAATAAACCATTTCCCAACAGCATCGAGATTTGGCTATTGCAGAAACGTTTTATGATGATGTTTGCCTAATTTGACAAAAATGATGAAGTGGATAGGACTCCAGAAGTGTTCTTAAGTCTAGACTTGGAAACAAAAGAATCATTGAGTGGAGTGGGAGATGGTGATGTAAATCATCTTATAACAAAAATGGAGTGGCATTTTACGGGTCCCCATAAATGTACACGAAGGTGTATTGATTTTAAATATTTGCTACACCTCTTAAAATTAAAAGAAAAACCAAGTGCAGAAAAAAGAACTCAAACTGAGGAAATCCTTTTGAAAACTCAACCTGAGTTGAAGAGCCTATTGTTAAGAGTTTTAAATTTCTTGGTTATCAAATAAATAATTAAGGAGATGTAAATTTATTTCTCAAGAAAAATATTTCTTGTAAAATTTAATGTCATCTCCTTTTGTAGTGTGTATTTCCGTCAATGTTATTTTTTTTTTGAATAGCTGTGAATTTCTCATTTCTTTTTATGGCTTTAGACCTGCATTGCATTTTTGACTCTTCTTTGTTTTTGCAATAGTTGATATTAATATGTACATTGATGATTCCACAGAAAGCTCCGTCGAGCTCGAGCCGTCCCCGCCAACCTGAGAGGCCTTCCCCAGACCTTGACCACCGCGTTGATGACCACCGCCGACCTGAGAGACCATCGCCAGATCTTGACCACCGCCGCCGAGCTGAGAGGCCATCGCCAGACCTTGACCACCGCCGCCGATCTGAGAGGCCATCGCCAGACCATGATTACCCCCGCCGACCTGAGAGGCTGTCTCCAGATCGCCGATTGCGTGACCCTGAACTTCCTCGCCCTTCTTCCAAGAAAAAGTATGAAGATTATGACGATCATCACCATGAGGACCGCCACCGCCATGAGGACCGCCATCAGCGCGGTACCCATCGCAGTAGCAGTAGCCATCACCGTTCAGAATCTTCAGCTAACGCCAAACCATCCTCCGTAGGCCCATCTGAACCGCAATCCAAATCCGTTGATAAGAGGAAGGCCAGTGTTTTTTCTCGTATCAGTTTCCCAGCCGAAGATTCAGCAGCAGCTTCAAAGAAGCGAAAGGTGCCATCCTCGAGTGAAGTACCAGTGAGTTCTTCAGCGAGCCACAGGGGTGGCACAACGAATGGGTATCATGGGGAGTACAAAACGACTAC</genome_strand>
        <mrna_strand>ACATGATCCATTTGGCGGACAAGGTTTTATGCTGCCTTTCGGTCCTCCGATGCAGAG...................................................................................................................................................................................................................................................................................GGACCTTGCAGCAGACTTTGGGATGGGATTTAATGCTGGCCCACCAATCATGAGTAGAGAAGAATTTGAGGCTAGAAAGGCTGATCTGAGAAGGAAACGTGAGAGCGAGAGACGTGGAGAGAG...........................................................................................................................................................................................................................................................................................................................................................................GGAGTTCCCTAAAGACAGGGAGCATGCAAGGGATGTTGGGAGCACTGCTGATGGTCCTTCCCTGAAACCCAAATCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGCTCCGTCGAGCTCGAGCCGTCCCCGCCAACCTGAGAGGCCTTCCCCAGACCTTGACCACCGCGTTGATGACCACCGCCGACCTGAGAGACCATCGCCAGATCTTGACCACCGCCGCCGAGCTGAGAGGCCATCGCCAGACCTTGACCACCGCCGCCGATCTGAGAGGCCATCGCCAGACCATGATTACCCCCGCCGACCTGAGAGGCTGTCTCCAGATCGCCGATTGCGTGACCCTGAACTTCCTCGCCCTTCTTCCAAGAAAAAGTATGAAGATTATGACGATCATCACCATGAGGACCGCCACCGCCATGAGGACCGCCATCAGCGCGGTACCCATCGCAGTAGCAGTAGCCATCACCGTTCAGAATCTTCAGCTAACGCCAAACCATCCTCCGTAGGCCCATCTGAACCGCAATCCAAATCCGTTGATAAGAGGAAGGCCAGTGTTTTTTCTCGTATCAGTTTCCCAGCCGAAGATTCAGCAGCAGCTTCAAAGAAGCGAAAGGTGCCATCCTCGAGTGAAGTACCAGTGAGTTCTTCAGCGAGCCACAGGGGTGGCACAACGAATGGGTATCATGGGGAGTACAAAACGACTAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E705238" ref_strand="+" ref_description="SGN-E705238 [FA26CC01]">
      <seq>ggcaaccccagatggttcatatgctttaccaagtggtgccagtgctgttttaaagcccaatgaggctgcttttgaaagagaagttgaagggatgccttctatacgttccgttggtgatcttccacaagagcttcattgtcccttgtgtaaagaagtaatgaaagatgcagtgttgacaagcaagtgttgttttagcagttactgcgataaatgcataagggatcatatcatctcgaagtcggtgtgtgtctgtggggccacaaatatacttgctgatgacctgttacccaacaagactgtgagggatacaattaatagaatattggaatcaaataatagcagtgcagagcatgggggtagtgctctccaagttcaagatatggagtcagcgcgcattctcccaccaaagattccatctccttcacaatctgcagcttcaaggggtgagccgttgccaccaccaccacctcctccacctgttaaggaggaaaattctaaagcccaggagattgcagaagagggtaagaatggcagtgcttctcagcaaatgttggaaagaggaagaactttgaaggttgcagatgtttctgaagctacacacgagtccgtcagtgttaaagaacctgtatccccggggagtgctccattggctgatgaagaggttcagcaaaagcctgtagttggggaggcaggaaaaaaaaagaagaagaaaaaaccccgattgcctttgaaccctgctgctgctgagatgcagtgaaaagctgcacaagatcttgctgctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0101H16.1" temp_strand="-" temp_description="C02SLe0101H16.1  AC215444.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0101H16 sequenced_by:kribb upload_account_name:korea">
        <position start="31298" stop="29264"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30998" g_stop="30936" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="63" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30935" i_stop="30860" i_length="76">
            <donor d_prob="0.862" d_score="1.00"/>
            <acceptor a_prob="0.765" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="30859" g_stop="30711" g_length="149"/>
          <reference_exon_boundary r_type="cDNA" r_start="64" r_stop="212" r_length="149" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="30710" i_stop="30526" i_length="185">
            <donor d_prob="0.101" d_score="1.00"/>
            <acceptor a_prob="0.738" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="30525" g_stop="30361" g_length="165"/>
          <reference_exon_boundary r_type="cDNA" r_start="213" r_stop="377" r_length="165" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="30360" i_stop="30256" i_length="105">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="30255" g_stop="29941" g_length="315"/>
          <reference_exon_boundary r_type="cDNA" r_start="378" r_stop="692" r_length="315" r_score="0.997"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="29940" i_stop="29795" i_length="146">
            <donor d_prob="0.307" d_score="0.98"/>
            <acceptor a_prob="0.991" a_score="0.95"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="29794" g_stop="29753" g_length="42"/>
          <reference_exon_boundary r_type="cDNA" r_start="693" r_stop="734" r_length="42" r_score="0.952"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="29752" i_stop="29612" i_length="141">
            <donor d_prob="0.994" d_score="0.95"/>
            <acceptor a_prob="0.987" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="29611" g_stop="29564" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="735" r_stop="782" r_length="48" r_score="0.958"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0101H16.1" gen_strand="-" ref_id="SGN-E705238" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>782</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0101H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E705238" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30998" e_stop="30936"/>
          <exon e_start="30859" e_stop="30711"/>
          <exon e_start="30525" e_stop="30361"/>
          <exon e_start="30255" e_stop="29941"/>
          <exon e_start="29794" e_stop="29753"/>
          <exon e_start="29611" e_stop="29564"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGCAACCCCAGATGGTTCATATGCTTTACCAAGTGGTGCCAGTGCTGTTTTAAAGCCCAATGAGTAAGATTTCGTGTTATGTTGGTATTGCTGTGTCTGCTTGTAACAAGAATGTATATGACTGGCCCACTCGTTGTAGGGCTGCTTTTGAAAGAGAAGTTGAAGGGATGCCTTCTATACGTTCCGTTGGTGATCTTCCACAAGAGCTTCATTGTCCCTTGTGTAAAGAAGTAATGAAAGATGCAGTGTTGACAAGCAAGTGTTGTTTTAGCAGTTACTGCGATAAATGTAAGGAGCAAGCTGTTTAATTTGAGTGTTGTGTTGATTAAGTGTTTTTTCTATAAACGCAAGGAGTTTGCTGTTCAATGTGGGTGTTGTGTTGTAGCTTCTACAGTGAAATTTGGTTTTTTACTATTCAATTTTAGTGTGCCTGTATTCTGGAATTTCAAACTGATTGCAAGGGTGATCCTCAGGCATAAGGGATCATATCATCTCGAAGTCGGTGTGTGTCTGTGGGGCCACAAATATACTTGCTGATGACCTGTTACCCAACAAGACTGTGAGGGATACAATTAATAGAATATTGGAATCAAATAATAGCAGTGCAGAGCATGGGGGTAGTGCTCTCCAAGTTCAAGGTCAGTACCGGTTCTAACTCTCTGAACTGTTCTCTCGTTCAAGTCCATTATCTGCTTGATGTTTTTATTAGGCTTAGGTCTTGCCTTTGTTGTTATATCTTCCAGATATGGAGTCAGCGCGCATTCTCCCACCAAAGATTCCATCTCCTTCACAATCTGCAGCTTCAAGGGGTGAGCCGTTGCCACCACCACCACCTCCTCCACCTGTTAAGGAGGAAAATTCTAAAGCCCAGGAGATTGCAGAAGAGGGTAAGAATGGCAGTGCTTCTCAGCAAATGTTGGAAAGAGGAAGAACTTTGAAGGTTGCAGATGTTTCTGAAGCTACACACGAGTCCGTCAGTGTTAAAGAACCTGTATCCCCGGGGAGTGCTCCATTGGCTGATGAAGAGGTTCAGCAAAAGCCAGTAGTTGGGGAGGCAGGTAATGGTGCTCTTTCGTTTACCTCTTTGGATTCGCAAGTTATTGTTTTTTTTCTTACCGAGCAGCTTAGAGGAGATGCTTTAGTTTCTTACTTCCCTTGGATCGGGAAGTGTTCTCATCTAGATATTGTTCTTTTATGTTTTCAGGAAAAAAAAAGAAGAAGAAAAAAACACGATTGCCTTTGAACCGTATGTACTCGCTTCCTTTATCTTGTGCACGTATTGATAGATTTGTTAACTATTTTGGAATAAAACTTTGATTATTATGTCTGCATTCTTGATGGAGCTTTGTACACTTCCTAGTTCCTAAATTACTTGGTGCCCTTGCAGCTGCTGCTGCTGAGATGCAGTGGAGAGCTGCACAAGATCTTGCTGCTG</genome_strand>
        <mrna_strand>GGCAACCCCAGATGGTTCATATGCTTTACCAAGTGGTGCCAGTGCTGTTTTAAAGCCCAATGA............................................................................GGCTGCTTTTGAAAGAGAAGTTGAAGGGATGCCTTCTATACGTTCCGTTGGTGATCTTCCACAAGAGCTTCATTGTCCCTTGTGTAAAGAAGTAATGAAAGATGCAGTGTTGACAAGCAAGTGTTGTTTTAGCAGTTACTGCGATAAAT.........................................................................................................................................................................................GCATAAGGGATCATATCATCTCGAAGTCGGTGTGTGTCTGTGGGGCCACAAATATACTTGCTGATGACCTGTTACCCAACAAGACTGTGAGGGATACAATTAATAGAATATTGGAATCAAATAATAGCAGTGCAGAGCATGGGGGTAGTGCTCTCCAAGTTCAAG.........................................................................................................ATATGGAGTCAGCGCGCATTCTCCCACCAAAGATTCCATCTCCTTCACAATCTGCAGCTTCAAGGGGTGAGCCGTTGCCACCACCACCACCTCCTCCACCTGTTAAGGAGGAAAATTCTAAAGCCCAGGAGATTGCAGAAGAGGGTAAGAATGGCAGTGCTTCTCAGCAAATGTTGGAAAGAGGAAGAACTTTGAAGGTTGCAGATGTTTCTGAAGCTACACACGAGTCCGTCAGTGTTAAAGAACCTGTATCCCCGGGGAGTGCTCCATTGGCTGATGAAGAGGTTCAGCAAAAGCCTGTAGTTGGGGAGGCAG..................................................................................................................................................GAAAAAAAAAGAAGAAGAAAAAACCCCGATTGCCTTTGAACC.............................................................................................................................................CTGCTGCTGCTGAGATGCAGTGAAAAGCTGCACAAGATCTTGCTGCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E219626" ref_strand="+" ref_description="SGN-E219626 [cLEL-11-E13](-)">
      <seq>caaagggtgagccgttgacaccaccaaccgcctcctccacctgttaaggaggaaaattctaaagcccaggagattgcagaagagggtaagaatggcagtgcttctcagcaaatgttggaaagaggaagaactttgaaggttgcagatgtttctgaagctacacacgagtccgtcagtgttaaagaacctgtatccccggggagtgctccattggctgatgaagaggttcagcaaaagcctgtagttggggaggcaggaaaaacaaacaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0101H16.1" temp_strand="-" temp_description="C02SLe0101H16.1  AC215444.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0101H16 sequenced_by:kribb upload_account_name:korea">
        <position start="30495" stop="29637"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30195" g_stop="29941" g_length="255"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="256" r_length="256" r_score="0.976"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29940" i_stop="29795" i_length="146">
            <donor d_prob="0.307" d_score="0.98"/>
            <acceptor a_prob="0.991" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29794" g_stop="29769" g_length="26"/>
          <reference_exon_boundary r_type="cDNA" r_start="257" r_stop="282" r_length="26" r_score="0.808"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0101H16.1" gen_strand="-" ref_id="SGN-E219626" ref_strand="+">
        <total_alignment_score>0.976</total_alignment_score>
        <cumulative_length_of_scored_exons>281</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0101H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E219626" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30195" e_stop="29941"/>
          <exon e_start="29794" e_stop="29769"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAGGGGTGAGCCGTTGCCACCACC-ACCACCTCCTCCACCTGTTAAGGAGGAAAATTCTAAAGCCCAGGAGATTGCAGAAGAGGGTAAGAATGGCAGTGCTTCTCAGCAAATGTTGGAAAGAGGAAGAACTTTGAAGGTTGCAGATGTTTCTGAAGCTACACACGAGTCCGTCAGTGTTAAAGAACCTGTATCCCCGGGGAGTGCTCCATTGGCTGATGAAGAGGTTCAGCAAAAGCCAGTAGTTGGGGAGGCAGGTAATGGTGCTCTTTCGTTTACCTCTTTGGATTCGCAAGTTATTGTTTTTTTTCTTACCGAGCAGCTTAGAGGAGATGCTTTAGTTTCTTACTTCCCTTGGATCGGGAAGTGTTCTCATCTAGATATTGTTCTTTTATGTTTTCAGGAAAAAAAAAGAAGAAGAAAAAAACA</genome_strand>
        <mrna_strand>CAAAGGGTGAGCCGTTGACACCACCAACCGCCTCCTCCACCTGTTAAGGAGGAAAATTCTAAAGCCCAGGAGATTGCAGAAGAGGGTAAGAATGGCAGTGCTTCTCAGCAAATGTTGGAAAGAGGAAGAACTTTGAAGGTTGCAGATGTTTCTGAAGCTACACACGAGTCCGTCAGTGTTAAAGAACCTGTATCCCCGGGGAGTGCTCCATTGGCTGATGAAGAGGTTCAGCAAAAGCCTGTAGTTGGGGAGGCAG..................................................................................................................................................GAAAAACAAACAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E233884" ref_strand="+" ref_description="SGN-E233884 [cLEL-8-L9](-)">
      <seq>cacctgttaaggaggaaaattctaaagcccaggagattgcagaagagggtaagaatggcagtgcttctcagcaaatgttggaaagaggaagaactttgaaggttgcagatgtttctgaagctacacacgagtccgtcagtgttaaagaacctgtatccccggggagtgctccattggctgatgaagaggttcagcaaaagcctgtagttggggaggcaggaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0101H16.1" temp_strand="-" temp_description="C02SLe0101H16.1  AC215444.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0101H16 sequenced_by:kribb upload_account_name:korea">
        <position start="30459" stop="29637"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30159" g_stop="29941" g_length="219"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="219" r_length="219" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29940" i_stop="29795" i_length="146">
            <donor d_prob="0.307" d_score="0.98"/>
            <acceptor a_prob="0.991" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29794" g_stop="29769" g_length="26"/>
          <reference_exon_boundary r_type="cDNA" r_start="220" r_stop="245" r_length="26" r_score="0.846"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0101H16.1" gen_strand="-" ref_id="SGN-E233884" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>245</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0101H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E233884" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30159" e_stop="29941"/>
          <exon e_start="29794" e_stop="29769"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACCTGTTAAGGAGGAAAATTCTAAAGCCCAGGAGATTGCAGAAGAGGGTAAGAATGGCAGTGCTTCTCAGCAAATGTTGGAAAGAGGAAGAACTTTGAAGGTTGCAGATGTTTCTGAAGCTACACACGAGTCCGTCAGTGTTAAAGAACCTGTATCCCCGGGGAGTGCTCCATTGGCTGATGAAGAGGTTCAGCAAAAGCCAGTAGTTGGGGAGGCAGGTAATGGTGCTCTTTCGTTTACCTCTTTGGATTCGCAAGTTATTGTTTTTTTTCTTACCGAGCAGCTTAGAGGAGATGCTTTAGTTTCTTACTTCCCTTGGATCGGGAAGTGTTCTCATCTAGATATTGTTCTTTTATGTTTTCAGGAAAAAAAAAGAAGAAGAAAAAAACA</genome_strand>
        <mrna_strand>CACCTGTTAAGGAGGAAAATTCTAAAGCCCAGGAGATTGCAGAAGAGGGTAAGAATGGCAGTGCTTCTCAGCAAATGTTGGAAAGAGGAAGAACTTTGAAGGTTGCAGATGTTTCTGAAGCTACACACGAGTCCGTCAGTGTTAAAGAACCTGTATCCCCGGGGAGTGCTCCATTGGCTGATGAAGAGGTTCAGCAAAAGCCTGTAGTTGGGGAGGCAG..................................................................................................................................................GAAAAAAAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E298402" ref_strand="+" ref_description="SGN-E298402 [cLET-41-H8]">
      <seq>gagattgcagaagagggtaagaatggcagtgcttctcagcaaatgttggaaagaggaagaactttgaaggttgcagatgtttctgaagctacacacgagtccgtcagtgttaaagaacctgtatccccggggagtgctccattggctgatgaagaggttcagcaaaagcctgtagttggggaggcaggaaaaaaaaacaaaaaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0101H16.1" temp_strand="-" temp_description="C02SLe0101H16.1  AC215444.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0101H16 sequenced_by:kribb upload_account_name:korea">
        <position start="30427" stop="29637"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30127" g_stop="29941" g_length="187"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="187" r_length="187" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29940" i_stop="29795" i_length="146">
            <donor d_prob="0.307" d_score="0.98"/>
            <acceptor a_prob="0.991" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29794" g_stop="29777" g_length="18"/>
          <reference_exon_boundary r_type="cDNA" r_start="188" r_stop="205" r_length="18" r_score="0.778"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0101H16.1" gen_strand="-" ref_id="SGN-E298402" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>205</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0101H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E298402" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30127" e_stop="29941"/>
          <exon e_start="29794" e_stop="29777"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGATTGCAGAAGAGGGTAAGAATGGCAGTGCTTCTCAGCAAATGTTGGAAAGAGGAAGAACTTTGAAGGTTGCAGATGTTTCTGAAGCTACACACGAGTCCGTCAGTGTTAAAGAACCTGTATCCCCGGGGAGTGCTCCATTGGCTGATGAAGAGGTTCAGCAAAAGCCAGTAGTTGGGGAGGCAGGTAATGGTGCTCTTTCGTTTACCTCTTTGGATTCGCAAGTTATTGTTTTTTTTCTTACCGAGCAGCTTAGAGGAGATGCTTTAGTTTCTTACTTCCCTTGGATCGGGAAGTGTTCTCATCTAGATATTGTTCTTTTATGTTTTCAGGAAAAAAAAAGAAGAAGA</genome_strand>
        <mrna_strand>GAGATTGCAGAAGAGGGTAAGAATGGCAGTGCTTCTCAGCAAATGTTGGAAAGAGGAAGAACTTTGAAGGTTGCAGATGTTTCTGAAGCTACACACGAGTCCGTCAGTGTTAAAGAACCTGTATCCCCGGGGAGTGCTCCATTGGCTGATGAAGAGGTTCAGCAAAAGCCTGTAGTTGGGGAGGCAG..................................................................................................................................................GAAAAAAAAACAAAAAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E541561" ref_strand="+" ref_description="SGN-E541561 [TUS-62-G16]">
      <seq>ggagattgcagaagagggtaagaatggcagtgcttctcagcaaatgttggaaagaggaagaactttgaaggttgcagatgtttctgaagctacacacgagtccgtcagtgttaaagaacctgtatccccggggagtgctccattggctgatgaagaggttcagcaaaagcctgtagttggggaggcaggaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0101H16.1" temp_strand="-" temp_description="C02SLe0101H16.1  AC215444.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0101H16 sequenced_by:kribb upload_account_name:korea">
        <position start="30428" stop="29637"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30128" g_stop="29941" g_length="188"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="188" r_length="188" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29940" i_stop="29795" i_length="146">
            <donor d_prob="0.307" d_score="0.98"/>
            <acceptor a_prob="0.991" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29794" g_stop="29779" g_length="16"/>
          <reference_exon_boundary r_type="cDNA" r_start="189" r_stop="204" r_length="16" r_score="0.875"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0101H16.1" gen_strand="-" ref_id="SGN-E541561" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>204</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0101H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E541561" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30128" e_stop="29941"/>
          <exon e_start="29794" e_stop="29779"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAGATTGCAGAAGAGGGTAAGAATGGCAGTGCTTCTCAGCAAATGTTGGAAAGAGGAAGAACTTTGAAGGTTGCAGATGTTTCTGAAGCTACACACGAGTCCGTCAGTGTTAAAGAACCTGTATCCCCGGGGAGTGCTCCATTGGCTGATGAAGAGGTTCAGCAAAAGCCAGTAGTTGGGGAGGCAGGTAATGGTGCTCTTTCGTTTACCTCTTTGGATTCGCAAGTTATTGTTTTTTTTCTTACCGAGCAGCTTAGAGGAGATGCTTTAGTTTCTTACTTCCCTTGGATCGGGAAGTGTTCTCATCTAGATATTGTTCTTTTATGTTTTCAGGAAAAAAAAAGAAGAA</genome_strand>
        <mrna_strand>GGAGATTGCAGAAGAGGGTAAGAATGGCAGTGCTTCTCAGCAAATGTTGGAAAGAGGAAGAACTTTGAAGGTTGCAGATGTTTCTGAAGCTACACACGAGTCCGTCAGTGTTAAAGAACCTGTATCCCCGGGGAGTGCTCCATTGGCTGATGAAGAGGTTCAGCAAAAGCCTGTAGTTGGGGAGGCAG..................................................................................................................................................GAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E548569" ref_strand="+" ref_description="SGN-E548569 [TUS-62-G16](-)">
      <seq>ggagattgcagaagagggtaagaatggcagtgcttctcagcaaatgttggaaagaggaagaactttgaaggttgcagatgtttctgaagctacacacgagtccgtcagtgttaaagaacctgtatccccggggagtgctccattggctgatgaagaggttcagcaaaagcctgtagttggggaggcaggaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0101H16.1" temp_strand="-" temp_description="C02SLe0101H16.1  AC215444.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0101H16 sequenced_by:kribb upload_account_name:korea">
        <position start="30428" stop="29637"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30128" g_stop="29941" g_length="188"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="188" r_length="188" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29940" i_stop="29795" i_length="146">
            <donor d_prob="0.307" d_score="0.98"/>
            <acceptor a_prob="0.991" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29794" g_stop="29779" g_length="16"/>
          <reference_exon_boundary r_type="cDNA" r_start="189" r_stop="204" r_length="16" r_score="0.875"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0101H16.1" gen_strand="-" ref_id="SGN-E548569" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>204</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0101H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E548569" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30128" e_stop="29941"/>
          <exon e_start="29794" e_stop="29779"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAGATTGCAGAAGAGGGTAAGAATGGCAGTGCTTCTCAGCAAATGTTGGAAAGAGGAAGAACTTTGAAGGTTGCAGATGTTTCTGAAGCTACACACGAGTCCGTCAGTGTTAAAGAACCTGTATCCCCGGGGAGTGCTCCATTGGCTGATGAAGAGGTTCAGCAAAAGCCAGTAGTTGGGGAGGCAGGTAATGGTGCTCTTTCGTTTACCTCTTTGGATTCGCAAGTTATTGTTTTTTTTCTTACCGAGCAGCTTAGAGGAGATGCTTTAGTTTCTTACTTCCCTTGGATCGGGAAGTGTTCTCATCTAGATATTGTTCTTTTATGTTTTCAGGAAAAAAAAAGAAGAA</genome_strand>
        <mrna_strand>GGAGATTGCAGAAGAGGGTAAGAATGGCAGTGCTTCTCAGCAAATGTTGGAAAGAGGAAGAACTTTGAAGGTTGCAGATGTTTCTGAAGCTACACACGAGTCCGTCAGTGTTAAAGAACCTGTATCCCCGGGGAGTGCTCCATTGGCTGATGAAGAGGTTCAGCAAAAGCCTGTAGTTGGGGAGGCAG..................................................................................................................................................GAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E215337" ref_strand="-" ref_description="SGN-E215337 [cLEL-20-M12](-)">
      <seq>gcgcgcattctcccaccaaagattccatctccttcacaatctgcagcttcaaggggtgagccgttgccaccaccaccacctcctccacctgttaaggaggaaaattctaaagcccaggagattgcagaagagggtaagaatggcagtgcttctcagcaaatgttggaaagaggaagaactttgaaggttgcagatgtttctgaagctacacacgagtccgttcagtgttaaagaacctgtatccccggggtagtgctccattggctgatgaagaggttcagcaaaagcctgtagttggggaggcaggaaaaaaaaaaaact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0101H16.1" temp_strand="-" temp_description="C02SLe0101H16.1  AC215444.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0101H16 sequenced_by:kribb upload_account_name:korea">
        <position start="30544" stop="29637"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30244" g_stop="29941" g_length="304"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="306" r_length="306" r_score="0.984"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29940" i_stop="29795" i_length="146">
            <donor d_prob="0.307" d_score="0.98"/>
            <acceptor a_prob="0.991" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29794" g_stop="29780" g_length="15"/>
          <reference_exon_boundary r_type="cDNA" r_start="307" r_stop="321" r_length="15" r_score="0.800"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0101H16.1" gen_strand="-" ref_id="SGN-E215337" ref_strand="-">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>319</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0101H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E215337" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="30244" e_stop="29941"/>
          <exon e_start="29794" e_stop="29780"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCGCGCATTCTCCCACCAAAGATTCCATCTCCTTCACAATCTGCAGCTTCAAGGGGTGAGCCGTTGCCACCACCACCACCTCCTCCACCTGTTAAGGAGGAAAATTCTAAAGCCCAGGAGATTGCAGAAGAGGGTAAGAATGGCAGTGCTTCTCAGCAAATGTTGGAAAGAGGAAGAACTTTGAAGGTTGCAGATGTTTCTGAAGCTACACACGAGTCCG-TCAGTGTTAAAGAACCTGTATCCCCGGGG-AGTGCTCCATTGGCTGATGAAGAGGTTCAGCAAAAGCCAGTAGTTGGGGAGGCAGGTAATGGTGCTCTTTCGTTTACCTCTTTGGATTCGCAAGTTATTGTTTTTTTTCTTACCGAGCAGCTTAGAGGAGATGCTTTAGTTTCTTACTTCCCTTGGATCGGGAAGTGTTCTCATCTAGATATTGTTCTTTTATGTTTTCAGGAAAAAAAAAGAAGA</genome_strand>
        <mrna_strand>GCGCGCATTCTCCCACCAAAGATTCCATCTCCTTCACAATCTGCAGCTTCAAGGGGTGAGCCGTTGCCACCACCACCACCTCCTCCACCTGTTAAGGAGGAAAATTCTAAAGCCCAGGAGATTGCAGAAGAGGGTAAGAATGGCAGTGCTTCTCAGCAAATGTTGGAAAGAGGAAGAACTTTGAAGGTTGCAGATGTTTCTGAAGCTACACACGAGTCCGTTCAGTGTTAAAGAACCTGTATCCCCGGGGTAGTGCTCCATTGGCTGATGAAGAGGTTCAGCAAAAGCCTGTAGTTGGGGAGGCAG..................................................................................................................................................GAAAAAAAAAAAACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E327704" ref_strand="+" ref_description="SGN-E327704 [cTOC-20-K19]">
      <seq>agagaactagtgagctagaaaaaagagcttttaatatttttgtactttatatcaattttctttgagttcaatatcaggcctattatgattttttgatcggcctcgttgttgttatattgtttttgtttgaggaaaaaaaggaattttaagaaaaaaggagctatgtcagtttattttaagtttaaaagtgcgaaagattatgattcaattccaattgatggtcactttattactgttggtaatttgaaagaaaaaatatttgaatccaagcatctgggcaggggtacagatttcgacctcgttgtcaccaacgcccagtctaacgaagaatatcttgatgaggacaccttgattcccaaaaatactagtgttttgattcgtcgcgttcctggacgacctcgcatgcccatagtaactgcacctgtaacagaaccagacgagccccaggtagaataccgatctgaggaggctcaagcagttagaagtaattttgtgggaggggagtcatctgccaccaaatatcctgaagatcttgaatgggatgaatttggaaatgatctttactctattcctgaaacaatatcagtacagtcaagcaaccaagtgcaggatgctcctcctccaagtaaagctgatgaggagagtaagatcaaagctttaattgacactccagccttagattggcagagtcaaccctctgatggctttggtgctgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0101H16.1" temp_strand="-" temp_description="C02SLe0101H16.1  AC215444.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0101H16 sequenced_by:kribb upload_account_name:korea">
        <position start="34357" stop="31479"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34057" g_stop="33730" g_length="328"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="328" r_length="328" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="33729" i_stop="32900" i_length="830">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.913" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="32899" g_stop="32788" g_length="112"/>
          <reference_exon_boundary r_type="cDNA" r_start="329" r_stop="440" r_length="112" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="32787" i_stop="32293" i_length="495">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="32292" g_stop="32211" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="441" r_stop="522" r_length="82" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="32210" i_stop="32110" i_length="101">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="32109" g_stop="31943" g_length="167"/>
          <reference_exon_boundary r_type="cDNA" r_start="523" r_stop="689" r_length="167" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="31942" i_stop="31806" i_length="137">
            <donor d_prob="0.974" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="31805" g_stop="31779" g_length="27"/>
          <reference_exon_boundary r_type="cDNA" r_start="690" r_stop="716" r_length="27" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0101H16.1" gen_strand="-" ref_id="SGN-E327704" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>716</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0101H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E327704" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34057" e_stop="33730"/>
          <exon e_start="32899" e_stop="32788"/>
          <exon e_start="32292" e_stop="32211"/>
          <exon e_start="32109" e_stop="31943"/>
          <exon e_start="31805" e_stop="31779"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAGAAGTTGTGAGCTAGAAAAAAGAGCTTTTAATATTTTTGTACTTTATATCAATTTTCTTTGAGTTCAATATCAGGCCTATTATGATTTTTTGATCGGCCTCGTTGTTGTTATATTGTTTTTGTTTGAGGAAAAAAAGGAATTTTAAGAAAAAAGGAGCTATGTCAGTTTATTTTAAGTTTAAAAGTGCGAAAGATTATGATTCAATTCCAATTGATGGTCACTTTATTACTGTTGGTAATTTGAAAGAAAAAATATTTGAATCCAAGCATCTGGGCAGGGGTACAGATTTCGACCTCGTTGTCACCAACGCCCAGTCTAACGAAGGTTGGTTAGCTTCAATATAGTTAGTCATTTTCGTGCATTCCTAGTTGCATTTCTAGTAGTATTGCGCAAGTTGTTGTGTGACATTGACCTTGGGGTTTAGTGTAACTAAGGCATTGTTACTGAGGTGTTTCTCAGGGTGTTATTTTGGTTGATTCAATTATGATCTCTCTGCTATCAAATATATTTAGGTACTTTAGTATGTGCATTTTCCAAAAATAGAAGTGGCTTTTAACAGATGAAGATGATCACAGTGATTCGATTTAATTTTGAGTTGCTAAATTTATGCCTTTGAAATGAGAAGGATGATGCATTGACTCTTAAAAGGACCTTTGCATTGTAAAAATGTCTGATTGTAGTTCTCATTCTCTTTGGTATAATTCTGGCATCTCATCTTGATGGGTGGGTTGATAATTATATTGGTTTAAAAGGAGAGTCGTCTATTCGTTAATGTTTAAGTGCTGGGTTTGTAAAACTTGAGCTAGTACCATATCATTCTGCAACTTGGTTATTCCATAGTAGTCTTTGAAGAACTTCACCAATACTACTATGTATTGTACGACCCGGCACACAATATGTACCTTACTAGTGCTAGCCGAGGAAAAAGGTTTCATGTGAAGAGCCTATTTCACTCAAGGTTGATGTCACACAACAAATCTCATGGTCTAGTTGATCCTGTGTAAGGAATATAGTGCTCGGCGAATAGTTTGTTTTGATTAGGGTGCATGAATGCTGGATCATACCAAATTGATTGCATAATTTGTATTTCCATCCATATGTTTGTGAACTCTACAGGGCTTTATGTGTTTTGTCTTCTCTTTTTGCAATTTCAGAATATCTTGATGAGGACACCTTGATTCCCAAAAATACTAGTGTTTTGATTCGTCGCGTTCCTGGACGACCTCGCATGCCCATAGTAACTGCACCTGTAACAGAACCAGACGAGTATTAATCTTGATCCTTTTGACTCTCATCTGTTAGATTTATGAATACAAATACTGCTTTATCGTTGAGAATCCAAAATCTGTGGAAAAAAAGACGGTTTACCTGGATTAGTTACATTGTTTATTCCAAAGAAAAGAGTGACGTGGGTTACTTTTCTTCTTGGAGCTGGTGGTGGGGTGTTATGGGTGTTTACTAAATCTCAAGATCCTTTTTCTTTGATTTTTTCCTTTCCCTTATGAAGATCTTAGAATGGTGGTGGGGTGGGTATAGACCTTTACACTGTGTGGAGGGTGGTTGAAAGGGGGAGGCGTACAGGGGGAGAATAGATGCTAATGCCGTCATTTGCATTTTGTTGAATATGATGTTCAAAGCTTCTTTTTCCTCCCCCCTCTCCCCAGGGTGGGCATTGGTAATCATATGTCCTTGTACTGCTTTTGTCTTTTGGTCTGTGCCATAATAGCTGTGTTGAATATGACCAAGATGTGTTTTCTGCAGGCCCCAGGTAGAATACCGATCTGAGGAGGCTCAAGCAGTTAGAAGTAATTTTGTGGGAGGGGAGTCATCTGCCACCAAATATGTAAGCGCCCGTAACACTCTGCATTAGGAGAGTGTTGGTGATTGTAGTTGTAACAATTGGTGATCTTTAAGCATACTGAAATATCTATATCCATTTTGTAGCCTGAAGATCTTGAATGGGATGAATTTGGAAATGATCTTTACTCTATTCCTGAAACAATATCAGTACAGTCAAGCAACCAAGTGCAGGATGCTCCTCCTCCAAGTAAAGCTGATGAGGAGAGTAAGATCAAAGCTTTAATTGACACTCCAGCCTTAGATTGGCAGAGGTGGGAAAGCTTCTTTTTTCTCCTTTTGAAATGTTCATGCACACTTGACTCTGTTTTTATTGCATTAGCTGTTACTATTTCTAATATGTGATGATATTGGTATGAAAATGATTCTTATGGTCCTTATGTTGATGCAGTCAACCCTCTGATGGCTTTGGTGCTGG</genome_strand>
        <mrna_strand>AGAGAACTAGTGAGCTAGAAAAAAGAGCTTTTAATATTTTTGTACTTTATATCAATTTTCTTTGAGTTCAATATCAGGCCTATTATGATTTTTTGATCGGCCTCGTTGTTGTTATATTGTTTTTGTTTGAGGAAAAAAAGGAATTTTAAGAAAAAAGGAGCTATGTCAGTTTATTTTAAGTTTAAAAGTGCGAAAGATTATGATTCAATTCCAATTGATGGTCACTTTATTACTGTTGGTAATTTGAAAGAAAAAATATTTGAATCCAAGCATCTGGGCAGGGGTACAGATTTCGACCTCGTTGTCACCAACGCCCAGTCTAACGAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATATCTTGATGAGGACACCTTGATTCCCAAAAATACTAGTGTTTTGATTCGTCGCGTTCCTGGACGACCTCGCATGCCCATAGTAACTGCACCTGTAACAGAACCAGACGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCCAGGTAGAATACCGATCTGAGGAGGCTCAAGCAGTTAGAAGTAATTTTGTGGGAGGGGAGTCATCTGCCACCAAATAT.....................................................................................................CCTGAAGATCTTGAATGGGATGAATTTGGAAATGATCTTTACTCTATTCCTGAAACAATATCAGTACAGTCAAGCAACCAAGTGCAGGATGCTCCTCCTCCAAGTAAAGCTGATGAGGAGAGTAAGATCAAAGCTTTAATTGACACTCCAGCCTTAGATTGGCAGAG.........................................................................................................................................TCAACCCTCTGATGGCTTTGGTGCTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E545174" ref_strand="+" ref_description="SGN-E545174 [TUS-67-O5]">
      <seq>ggaaaccctagttccggcaccccccataaagctttactcttttggctttcttttcagttttccgttcgatccgcttcggaattcaacggacttttcggcgagttcaccgtgcgcgaagaggaattgacgatttccggtagagaaacctctcctgttatctgaagaattgtcggtcgacgggcggtcggttggtcgtcgctgattggattcgattcaattcaatcgatctgaagaatccggtgttctataaacccatagaaagcttctgagtttatcggatagaatcatcaacctcttcaagggtatccgctaagagagacgcccggcgtgattagatagatcggatcgagatcgtccccagtcgaaggagtagcggtagcagtggtttgattttggttataataagcttgcctttagatattgctgctgacggaagcttgcggattattttgctcgtggaggatgttcctactgatctattggaggaatttggtttgactgattttcttgagttattgaagagaagttgtgagctagaaaaaagagcttttaatatttttgtactttatatcaattttctttgagttcaatatcaggcctattatgattttttgatcggcctcgttgttgttatattgtttttgtttgaggaaaaaaaggaattttnnngaaaaaaaannnaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0101H16.1" temp_strand="-" temp_description="C02SLe0101H16.1  AC215444.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0101H16 sequenced_by:kribb upload_account_name:korea">
        <position start="34876" stop="33611"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34576" g_stop="33894" g_length="683"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="683" r_length="683" r_score="0.985"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="33893" i_stop="33808" i_length="86">
            <donor d_prob="0.000" d_score="0.80"/>
            <acceptor a_prob="0.263" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="33807" g_stop="33799" g_length="9"/>
          <reference_exon_boundary r_type="cDNA" r_start="684" r_stop="692" r_length="9" r_score="0.778"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0101H16.1" gen_strand="-" ref_id="SGN-E545174" ref_strand="+">
        <total_alignment_score>0.985</total_alignment_score>
        <cumulative_length_of_scored_exons>692</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0101H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E545174" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34576" e_stop="33894"/>
          <exon e_start="33807" e_stop="33799"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAAACCCTAGTTCCGGCACCCCCCATAAAGCTTTACTCTTTTGGCTTTCTTTTCAGTTTTCCGTTCGATCCGCTTCGGAATTCAACGGACTTTTCGGCGAGTTCACCGTGCGCGAAGAGGAATTGACGATTTCCGGTAGAGAAACCTCTCCTGTTATCTGAAGAATTGTCGGTCGACGGGCGGTCGGTTGGTCGTCGCTGATTGGATTCGATTCAATTCAATCGATCTGAAGAATCCGGTGTTCTATAAACCCATAGAAAGCTTCTGAGTTTATCGGATAGAATCATCAACCTCTTCAAGGGTATCCGCTAAGAGAGACGCCCGGCGTGATTAGATAGATCGGATCGAGATCGTCCCCAGTCGAAGGAGTAGCGGTAGCAGTGGTTTGATTTTGGTTATAATAAGCTTGCCTTTAGATATTGCTGCTGACGGAAGCTTGCGGATTATTTTGCTCGTGGAGGATGTTCCTACTGATCTATTGGAGGAATTTGGTTTGACTGATTTTCTTGAGTTATTGAAGAGAAGTTGTGAGCTAGAAAAAAGAGCTTTTAATATTTTTGTACTTTATATCAATTTTCTTTGAGTTCAATATCAGGCCTATTATGATTTTTTGATCGGCCTCGTTGTTGTTATATTGTTTTTGTTTGAGGAAAAAAAGGAATTTTAAGAAAAAAGGAGCTATGTCAGTTTATTTTAAGTTTAAAAGTGCGAAAGATTATGATTCAATTCCAATTGATGGTCACTTTATTACTGTTGGTAATTTGAAAGAAAAAATAT</genome_strand>
        <mrna_strand>GGAAACCCTAGTTCCGGCACCCCCCATAAAGCTTTACTCTTTTGGCTTTCTTTTCAGTTTTCCGTTCGATCCGCTTCGGAATTCAACGGACTTTTCGGCGAGTTCACCGTGCGCGAAGAGGAATTGACGATTTCCGGTAGAGAAACCTCTCCTGTTATCTGAAGAATTGTCGGTCGACGGGCGGTCGGTTGGTCGTCGCTGATTGGATTCGATTCAATTCAATCGATCTGAAGAATCCGGTGTTCTATAAACCCATAGAAAGCTTCTGAGTTTATCGGATAGAATCATCAACCTCTTCAAGGGTATCCGCTAAGAGAGACGCCCGGCGTGATTAGATAGATCGGATCGAGATCGTCCCCAGTCGAAGGAGTAGCGGTAGCAGTGGTTTGATTTTGGTTATAATAAGCTTGCCTTTAGATATTGCTGCTGACGGAAGCTTGCGGATTATTTTGCTCGTGGAGGATGTTCCTACTGATCTATTGGAGGAATTTGGTTTGACTGATTTTCTTGAGTTATTGAAGAGAAGTTGTGAGCTAGAAAAAAGAGCTTTTAATATTTTTGTACTTTATATCAATTTTCTTTGAGTTCAATATCAGGCCTATTATGATTTTTTGATCGGCCTCGTTGTTGTTATATTGTTTTTGTTTGAGGAAAAAAAGGAATTTTNNNGAAAAAAAANNNAA......................................................................................AAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E354963" ref_strand="+" ref_description="SGN-E354963 [cTOS-19-M20]">
      <seq>tagttccggcaccccccataaagctttactcttttggctttcttttcagttttccgttcgatccgcttcggaattcaacggacttttcggcgagttcaccgtgcgcgaagaggaattgacgatttccggtagagaaacctctcctgttatctgaagaattgtcggtcgacgggcggtcggttggtcgtcgctgattggattcgattcaattcaatcgatctgaagaatccggtgttctataaacccatagaaagcttctgagtttatcggatagaatcatcaacctcttcaagggtatccgctaagagagacgcccggcgtgattagatagatcggatcgagatcgtccccagtcgaaggagtagcggtagcagtggtttgattttggttataataagcttgcctttagatattgctgctgacggaagcttgcggattattttgctcgtggaggatgttcctactgatctattggaggaatttggtttgactgattttcttgagttattgaagagaagttgtgagctagaaaaaagagcttttaatatttttgtactttatatcaattttctttgagttcaatatcaggcctattatgattttttgatcggcctcgttgttgttatattgtttttgtttgaggaaaaaaaggaattttaagaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0101H16.1" temp_strand="-" temp_description="C02SLe0101H16.1  AC215444.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0101H16 sequenced_by:kribb upload_account_name:korea">
        <position start="34868" stop="33602"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34568" g_stop="33894" g_length="675"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="675" r_length="675" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0101H16.1" gen_strand="-" ref_id="SGN-E354963" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>675</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0101H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E354963" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34568" e_stop="33894"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGTTCCGGCACCCCCCATAAAGCTTTACTCTTTTGGCTTTCTTTTCAGTTTTCCGTTCGATCCGCTTCGGAATTCAACGGACTTTTCGGCGAGTTCACCGTGCGCGAAGAGGAATTGACGATTTCCGGTAGAGAAACCTCTCCTGTTATCTGAAGAATTGTCGGTCGACGGGCGGTCGGTTGGTCGTCGCTGATTGGATTCGATTCAATTCAATCGATCTGAAGAATCCGGTGTTCTATAAACCCATAGAAAGCTTCTGAGTTTATCGGATAGAATCATCAACCTCTTCAAGGGTATCCGCTAAGAGAGACGCCCGGCGTGATTAGATAGATCGGATCGAGATCGTCCCCAGTCGAAGGAGTAGCGGTAGCAGTGGTTTGATTTTGGTTATAATAAGCTTGCCTTTAGATATTGCTGCTGACGGAAGCTTGCGGATTATTTTGCTCGTGGAGGATGTTCCTACTGATCTATTGGAGGAATTTGGTTTGACTGATTTTCTTGAGTTATTGAAGAGAAGTTGTGAGCTAGAAAAAAGAGCTTTTAATATTTTTGTACTTTATATCAATTTTCTTTGAGTTCAATATCAGGCCTATTATGATTTTTTGATCGGCCTCGTTGTTGTTATATTGTTTTTGTTTGAGGAAAAAAAGGAATTTTAAGAAAAAAGGAGCTAT</genome_strand>
        <mrna_strand>TAGTTCCGGCACCCCCCATAAAGCTTTACTCTTTTGGCTTTCTTTTCAGTTTTCCGTTCGATCCGCTTCGGAATTCAACGGACTTTTCGGCGAGTTCACCGTGCGCGAAGAGGAATTGACGATTTCCGGTAGAGAAACCTCTCCTGTTATCTGAAGAATTGTCGGTCGACGGGCGGTCGGTTGGTCGTCGCTGATTGGATTCGATTCAATTCAATCGATCTGAAGAATCCGGTGTTCTATAAACCCATAGAAAGCTTCTGAGTTTATCGGATAGAATCATCAACCTCTTCAAGGGTATCCGCTAAGAGAGACGCCCGGCGTGATTAGATAGATCGGATCGAGATCGTCCCCAGTCGAAGGAGTAGCGGTAGCAGTGGTTTGATTTTGGTTATAATAAGCTTGCCTTTAGATATTGCTGCTGACGGAAGCTTGCGGATTATTTTGCTCGTGGAGGATGTTCCTACTGATCTATTGGAGGAATTTGGTTTGACTGATTTTCTTGAGTTATTGAAGAGAAGTTGTGAGCTAGAAAAAAGAGCTTTTAATATTTTTGTACTTTATATCAATTTTCTTTGAGTTCAATATCAGGCCTATTATGATTTTTTGATCGGCCTCGTTGTTGTTATATTGTTTTTGTTTGAGGAAAAAAAGGAATTTTAAGAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E352077" ref_strand="+" ref_description="SGN-E352077 [cTOS-13-B22]">
      <seq>tagttccggcaccccccataaagctttactcttttggctttcttttcagttttccgttcgatccgcttcggaattcaacggacttttcggcgagttcaccgtgcgcgaagaggaattgacgatttccggtagagaaacctctcctgttatctgaagaattgtcggtcgacgggcggtcggttggtcgtcgctgattggattcgattcaattcaatcgatctgaagaatccggtgttctataaacccatagaaagcttctgagtttatcggatagaatcatcaacctcttcaagggtatccgctaagagagacgcccggcgtgattagatagatcggatcgagatcgtccccagtcgaaggagtagcggtagcagtggtttgattttggttataataagcttgcctttagatattgctgctgacggaagcttgcggattattttgctcgtggaggatgttcctactgatctattggaggaatttggtttgactgattttcttgagttattgaagagaagttgtgagctagaaaaaagagcttttaatatttttgtactttatatcaattttctttgagttcaatatcaggcctattatgattttttgatcggcctcgttgttgttatattgtttttgtttgaggaaaaaaaggaattttaagaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0101H16.1" temp_strand="-" temp_description="C02SLe0101H16.1  AC215444.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0101H16 sequenced_by:kribb upload_account_name:korea">
        <position start="34868" stop="33602"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34568" g_stop="33896" g_length="673"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="673" r_length="673" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0101H16.1" gen_strand="-" ref_id="SGN-E352077" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>673</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0101H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E352077" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34568" e_stop="33896"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGTTCCGGCACCCCCCATAAAGCTTTACTCTTTTGGCTTTCTTTTCAGTTTTCCGTTCGATCCGCTTCGGAATTCAACGGACTTTTCGGCGAGTTCACCGTGCGCGAAGAGGAATTGACGATTTCCGGTAGAGAAACCTCTCCTGTTATCTGAAGAATTGTCGGTCGACGGGCGGTCGGTTGGTCGTCGCTGATTGGATTCGATTCAATTCAATCGATCTGAAGAATCCGGTGTTCTATAAACCCATAGAAAGCTTCTGAGTTTATCGGATAGAATCATCAACCTCTTCAAGGGTATCCGCTAAGAGAGACGCCCGGCGTGATTAGATAGATCGGATCGAGATCGTCCCCAGTCGAAGGAGTAGCGGTAGCAGTGGTTTGATTTTGGTTATAATAAGCTTGCCTTTAGATATTGCTGCTGACGGAAGCTTGCGGATTATTTTGCTCGTGGAGGATGTTCCTACTGATCTATTGGAGGAATTTGGTTTGACTGATTTTCTTGAGTTATTGAAGAGAAGTTGTGAGCTAGAAAAAAGAGCTTTTAATATTTTTGTACTTTATATCAATTTTCTTTGAGTTCAATATCAGGCCTATTATGATTTTTTGATCGGCCTCGTTGTTGTTATATTGTTTTTGTTTGAGGAAAAAAAGGAATTTTAAGAAAAAAGGAGCT</genome_strand>
        <mrna_strand>TAGTTCCGGCACCCCCCATAAAGCTTTACTCTTTTGGCTTTCTTTTCAGTTTTCCGTTCGATCCGCTTCGGAATTCAACGGACTTTTCGGCGAGTTCACCGTGCGCGAAGAGGAATTGACGATTTCCGGTAGAGAAACCTCTCCTGTTATCTGAAGAATTGTCGGTCGACGGGCGGTCGGTTGGTCGTCGCTGATTGGATTCGATTCAATTCAATCGATCTGAAGAATCCGGTGTTCTATAAACCCATAGAAAGCTTCTGAGTTTATCGGATAGAATCATCAACCTCTTCAAGGGTATCCGCTAAGAGAGACGCCCGGCGTGATTAGATAGATCGGATCGAGATCGTCCCCAGTCGAAGGAGTAGCGGTAGCAGTGGTTTGATTTTGGTTATAATAAGCTTGCCTTTAGATATTGCTGCTGACGGAAGCTTGCGGATTATTTTGCTCGTGGAGGATGTTCCTACTGATCTATTGGAGGAATTTGGTTTGACTGATTTTCTTGAGTTATTGAAGAGAAGTTGTGAGCTAGAAAAAAGAGCTTTTAATATTTTTGTACTTTATATCAATTTTCTTTGAGTTCAATATCAGGCCTATTATGATTTTTTGATCGGCCTCGTTGTTGTTATATTGTTTTTGTTTGAGGAAAAAAAGGAATTTTAAGAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E723200" ref_strand="+" ref_description="SGN-E723200 [FC19CH12]">
      <seq>agggcgattggcggccaatcggccgaattgcccgacaatcaatccgtttaaaatccgtggaaaccctagttccggcaccccccatacagctttactcttttggctttcttttcagttttccgttcgatccgcttcggaattcaacggacttttcggcgagttcaccgtgcgcgaagaggaattgacgatttccggtagagaaacctctcctgttatctgaagaattgtcggtcgacgggcggtcggttggtcgtcgctgattggattcgattcaattcaatcgatctgaagaatccggtgttctataaacccatagaaagcttctgagtttatcggatagaatcatcaacctcttcaagggtatccgctaagagagacgcccggcgtgattagatagatcggatcgagatcgtccccagtcgaaggagtagcggtagcagtggtttgattttggttataataagcttgcctttagatattgctgctgacggaagcttgcggattattttgctcgtggaggatgttcctactgatctattggaggaatttggtttgactgattttcttgagttattgaagagaagttgtgagctagaaaaaagagcttttaatatttttgtactttatatcaattttctttgagttcaatatcaggcctattatgattttttgatcggcctcgttgttgttatattgtttttgtttgaggaaaaaaaggaattttangaaaaaaaaananaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaccccc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0101H16.1" temp_strand="-" temp_description="C02SLe0101H16.1  AC215444.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0101H16 sequenced_by:kribb upload_account_name:korea">
        <position start="34882" stop="33602"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34604" g_stop="33902" g_length="703"/>
          <reference_exon_boundary r_type="cDNA" r_start="31" r_stop="733" r_length="703" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="740" polyA_stop="772"/>
      <MATCH_line gen_id="C02SLe0101H16.1" gen_strand="-" ref_id="SGN-E723200" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>703</cumulative_length_of_scored_exons>
        <coverage percentage="0.906" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0101H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E723200" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34604" e_stop="33902"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCCGACAATCAATCAGTTTCTCATCCGTGGAAACCCTAGTTCCGGCACCCCCCATAAAGCTTTACTCTTTTGGCTTTCTTTTCAGTTTTCCGTTCGATCCGCTTCGGAATTCAACGGACTTTTCGGCGAGTTCACCGTGCGCGAAGAGGAATTGACGATTTCCGGTAGAGAAACCTCTCCTGTTATCTGAAGAATTGTCGGTCGACGGGCGGTCGGTTGGTCGTCGCTGATTGGATTCGATTCAATTCAATCGATCTGAAGAATCCGGTGTTCTATAAACCCATAGAAAGCTTCTGAGTTTATCGGATAGAATCATCAACCTCTTCAAGGGTATCCGCTAAGAGAGACGCCCGGCGTGATTAGATAGATCGGATCGAGATCGTCCCCAGTCGAAGGAGTAGCGGTAGCAGTGGTTTGATTTTGGTTATAATAAGCTTGCCTTTAGATATTGCTGCTGACGGAAGCTTGCGGATTATTTTGCTCGTGGAGGATGTTCCTACTGATCTATTGGAGGAATTTGGTTTGACTGATTTTCTTGAGTTATTGAAGAGAAGTTGTGAGCTAGAAAAAAGAGCTTTTAATATTTTTGTACTTTATATCAATTTTCTTTGAGTTCAATATCAGGCCTATTATGATTTTTTGATCGGCCTCGTTGTTGTTATATTGTTTTTGTTTGAGGAAAAAAAGGAATTTTAAGAAAAAA</genome_strand>
        <mrna_strand>CCCGACAATCAATCCGTTTAAAATCCGTGGAAACCCTAGTTCCGGCACCCCCCATACAGCTTTACTCTTTTGGCTTTCTTTTCAGTTTTCCGTTCGATCCGCTTCGGAATTCAACGGACTTTTCGGCGAGTTCACCGTGCGCGAAGAGGAATTGACGATTTCCGGTAGAGAAACCTCTCCTGTTATCTGAAGAATTGTCGGTCGACGGGCGGTCGGTTGGTCGTCGCTGATTGGATTCGATTCAATTCAATCGATCTGAAGAATCCGGTGTTCTATAAACCCATAGAAAGCTTCTGAGTTTATCGGATAGAATCATCAACCTCTTCAAGGGTATCCGCTAAGAGAGACGCCCGGCGTGATTAGATAGATCGGATCGAGATCGTCCCCAGTCGAAGGAGTAGCGGTAGCAGTGGTTTGATTTTGGTTATAATAAGCTTGCCTTTAGATATTGCTGCTGACGGAAGCTTGCGGATTATTTTGCTCGTGGAGGATGTTCCTACTGATCTATTGGAGGAATTTGGTTTGACTGATTTTCTTGAGTTATTGAAGAGAAGTTGTGAGCTAGAAAAAAGAGCTTTTAATATTTTTGTACTTTATATCAATTTTCTTTGAGTTCAATATCAGGCCTATTATGATTTTTTGATCGGCCTCGTTGTTGTTATATTGTTTTTGTTTGAGGAAAAAAAGGAATTTTANGAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E545173" ref_strand="+" ref_description="SGN-E545173 [TUS-67-O5](-)">
      <seq>ggaaaccctagttccggcaccccccataaagctttactcttttggctttcttttcagttttccgttcgatccgcttcggaattcaacggacttttcggcgagttcaccgtgcgcgaagaggaattgacgatttccggtagagaaacctctcctgttatctgaagaattgtcggtcgacgggcggtcggttggtcgtcgctgattggattcgattcaattcaatcgatctgaagaatccggtgttctataaacccatagaaagcttctgagtttatcggatagaatcatcaacctcttcaagggtatccgctaagagagacgcccggcgtgattagatagatcggatcgagatcgtccccagtcgaaggagtagcggtagcagtggtttgattttggttataataagcttgcctttagatattgctgctgacggaagcttgcggattattttgctcgtggaggatgttcctactgatctattggaggaatttggtttgactgattttcttgagttattgaagagaagttgtgagctagaaaaaagagcttttaatatttttgtactttatatcaattttctttgagttcaatatcaggcctattatgattttttgatcggcctcgttgttgttatattgtttttgtttgaggaaaaaaaggaattttaagaaaaaaaaaaaaaaaaaaaagaaaaaaaaaaactcgaggggggcccgtaccca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0101H16.1" temp_strand="-" temp_description="C02SLe0101H16.1  AC215444.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0101H16 sequenced_by:kribb upload_account_name:korea">
        <position start="34876" stop="33602"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34576" g_stop="33902" g_length="675"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="675" r_length="675" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="676" polyA_stop="701"/>
      <MATCH_line gen_id="C02SLe0101H16.1" gen_strand="-" ref_id="SGN-E545173" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>675</cumulative_length_of_scored_exons>
        <coverage percentage="0.935" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0101H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E545173" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34576" e_stop="33902"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAAACCCTAGTTCCGGCACCCCCCATAAAGCTTTACTCTTTTGGCTTTCTTTTCAGTTTTCCGTTCGATCCGCTTCGGAATTCAACGGACTTTTCGGCGAGTTCACCGTGCGCGAAGAGGAATTGACGATTTCCGGTAGAGAAACCTCTCCTGTTATCTGAAGAATTGTCGGTCGACGGGCGGTCGGTTGGTCGTCGCTGATTGGATTCGATTCAATTCAATCGATCTGAAGAATCCGGTGTTCTATAAACCCATAGAAAGCTTCTGAGTTTATCGGATAGAATCATCAACCTCTTCAAGGGTATCCGCTAAGAGAGACGCCCGGCGTGATTAGATAGATCGGATCGAGATCGTCCCCAGTCGAAGGAGTAGCGGTAGCAGTGGTTTGATTTTGGTTATAATAAGCTTGCCTTTAGATATTGCTGCTGACGGAAGCTTGCGGATTATTTTGCTCGTGGAGGATGTTCCTACTGATCTATTGGAGGAATTTGGTTTGACTGATTTTCTTGAGTTATTGAAGAGAAGTTGTGAGCTAGAAAAAAGAGCTTTTAATATTTTTGTACTTTATATCAATTTTCTTTGAGTTCAATATCAGGCCTATTATGATTTTTTGATCGGCCTCGTTGTTGTTATATTGTTTTTGTTTGAGGAAAAAAAGGAATTTTAAGAAAAAA</genome_strand>
        <mrna_strand>GGAAACCCTAGTTCCGGCACCCCCCATAAAGCTTTACTCTTTTGGCTTTCTTTTCAGTTTTCCGTTCGATCCGCTTCGGAATTCAACGGACTTTTCGGCGAGTTCACCGTGCGCGAAGAGGAATTGACGATTTCCGGTAGAGAAACCTCTCCTGTTATCTGAAGAATTGTCGGTCGACGGGCGGTCGGTTGGTCGTCGCTGATTGGATTCGATTCAATTCAATCGATCTGAAGAATCCGGTGTTCTATAAACCCATAGAAAGCTTCTGAGTTTATCGGATAGAATCATCAACCTCTTCAAGGGTATCCGCTAAGAGAGACGCCCGGCGTGATTAGATAGATCGGATCGAGATCGTCCCCAGTCGAAGGAGTAGCGGTAGCAGTGGTTTGATTTTGGTTATAATAAGCTTGCCTTTAGATATTGCTGCTGACGGAAGCTTGCGGATTATTTTGCTCGTGGAGGATGTTCCTACTGATCTATTGGAGGAATTTGGTTTGACTGATTTTCTTGAGTTATTGAAGAGAAGTTGTGAGCTAGAAAAAAGAGCTTTTAATATTTTTGTACTTTATATCAATTTTCTTTGAGTTCAATATCAGGCCTATTATGATTTTTTGATCGGCCTCGTTGTTGTTATATTGTTTTTGTTTGAGGAAAAAAAGGAATTTTAAGAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E308314" ref_strand="+" ref_description="SGN-E308314 [cLEZ-6-I23](-)">
      <seq>tccccagtcgaaggagtagcggtagcagtggtttgattttggttataataagcttgcctttagatattgctgctgacggaagcttgcggattattttgctcgtggaggatgttcctactgatctattggaggaatttggtttgactgattttcttgagttattgaagagaagttgtgagctagaaaaaagagcttttaatatttttgtactttatatcaattttctttgagttcaatatcaggcctattatgattttttgatcggcctcgttgttgttatattgtttttgtttgaggaaaaaaaggaattttaagaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0101H16.1" temp_strand="-" temp_description="C02SLe0101H16.1  AC215444.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0101H16 sequenced_by:kribb upload_account_name:korea">
        <position start="34522" stop="33602"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34222" g_stop="33902" g_length="321"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="321" r_length="321" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="322" polyA_stop="338"/>
      <MATCH_line gen_id="C02SLe0101H16.1" gen_strand="-" ref_id="SGN-E308314" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>321</cumulative_length_of_scored_exons>
        <coverage percentage="0.950" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0101H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E308314" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34222" e_stop="33902"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCCCAGTCGAAGGAGTAGCGGTAGCAGTGGTTTGATTTTGGTTATAATAAGCTTGCCTTTAGATATTGCTGCTGACGGAAGCTTGCGGATTATTTTGCTCGTGGAGGATGTTCCTACTGATCTATTGGAGGAATTTGGTTTGACTGATTTTCTTGAGTTATTGAAGAGAAGTTGTGAGCTAGAAAAAAGAGCTTTTAATATTTTTGTACTTTATATCAATTTTCTTTGAGTTCAATATCAGGCCTATTATGATTTTTTGATCGGCCTCGTTGTTGTTATATTGTTTTTGTTTGAGGAAAAAAAGGAATTTTAAGAAAAAA</genome_strand>
        <mrna_strand>TCCCCAGTCGAAGGAGTAGCGGTAGCAGTGGTTTGATTTTGGTTATAATAAGCTTGCCTTTAGATATTGCTGCTGACGGAAGCTTGCGGATTATTTTGCTCGTGGAGGATGTTCCTACTGATCTATTGGAGGAATTTGGTTTGACTGATTTTCTTGAGTTATTGAAGAGAAGTTGTGAGCTAGAAAAAAGAGCTTTTAATATTTTTGTACTTTATATCAATTTTCTTTGAGTTCAATATCAGGCCTATTATGATTTTTTGATCGGCCTCGTTGTTGTTATATTGTTTTTGTTTGAGGAAAAAAAGGAATTTTAAGAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E308313" ref_strand="+" ref_description="SGN-E308313 [cLEZ-6-I23]">
      <seq>gaaaccctagttccggcaccccccataaagctttactcttttggctttcttttcagttttccgttcgatccgcttcggaattcaacggacttttcggcgagttcaccgtgcgcgaagaggaattgacgatttccggtagagaaacctctcctgttatctgaagaattgtcggtcgacgggcggtcggttggtcgtcgctgattggattcgattcaattcaatcgatctgaagaatccggtgttctataaacccatagaaagcttctgagtttatcggatagaatcatcaacctcttcaagggtatccgctaagagagacgcccggcgtgattagatagatcggatcgagatcgtccccagtcgaaggagtagcggtagcagtggtttgattttggttataataagcttgcctttagatattgctgctgacggaagcttgcggattattttgctcgtggaggatgttcctactgatctattggaggaatttggtttgactgattttcttgagttattgaagagaagttgtgagctagaaaaaagagcttttaatatttttgtactttatatcaattttctttgagttcaatatcaggcctattatgattttttgatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0101H16.1" temp_strand="-" temp_description="C02SLe0101H16.1  AC215444.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0101H16 sequenced_by:kribb upload_account_name:korea">
        <position start="34875" stop="33660"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34575" g_stop="33960" g_length="616"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="616" r_length="616" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0101H16.1" gen_strand="-" ref_id="SGN-E308313" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>616</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0101H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E308313" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34575" e_stop="33960"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAACCCTAGTTCCGGCACCCCCCATAAAGCTTTACTCTTTTGGCTTTCTTTTCAGTTTTCCGTTCGATCCGCTTCGGAATTCAACGGACTTTTCGGCGAGTTCACCGTGCGCGAAGAGGAATTGACGATTTCCGGTAGAGAAACCTCTCCTGTTATCTGAAGAATTGTCGGTCGACGGGCGGTCGGTTGGTCGTCGCTGATTGGATTCGATTCAATTCAATCGATCTGAAGAATCCGGTGTTCTATAAACCCATAGAAAGCTTCTGAGTTTATCGGATAGAATCATCAACCTCTTCAAGGGTATCCGCTAAGAGAGACGCCCGGCGTGATTAGATAGATCGGATCGAGATCGTCCCCAGTCGAAGGAGTAGCGGTAGCAGTGGTTTGATTTTGGTTATAATAAGCTTGCCTTTAGATATTGCTGCTGACGGAAGCTTGCGGATTATTTTGCTCGTGGAGGATGTTCCTACTGATCTATTGGAGGAATTTGGTTTGACTGATTTTCTTGAGTTATTGAAGAGAAGTTGTGAGCTAGAAAAAAGAGCTTTTAATATTTTTGTACTTTATATCAATTTTCTTTGAGTTCAATATCAGGCCTATTATGATTTTTTGATC</genome_strand>
        <mrna_strand>GAAACCCTAGTTCCGGCACCCCCCATAAAGCTTTACTCTTTTGGCTTTCTTTTCAGTTTTCCGTTCGATCCGCTTCGGAATTCAACGGACTTTTCGGCGAGTTCACCGTGCGCGAAGAGGAATTGACGATTTCCGGTAGAGAAACCTCTCCTGTTATCTGAAGAATTGTCGGTCGACGGGCGGTCGGTTGGTCGTCGCTGATTGGATTCGATTCAATTCAATCGATCTGAAGAATCCGGTGTTCTATAAACCCATAGAAAGCTTCTGAGTTTATCGGATAGAATCATCAACCTCTTCAAGGGTATCCGCTAAGAGAGACGCCCGGCGTGATTAGATAGATCGGATCGAGATCGTCCCCAGTCGAAGGAGTAGCGGTAGCAGTGGTTTGATTTTGGTTATAATAAGCTTGCCTTTAGATATTGCTGCTGACGGAAGCTTGCGGATTATTTTGCTCGTGGAGGATGTTCCTACTGATCTATTGGAGGAATTTGGTTTGACTGATTTTCTTGAGTTATTGAAGAGAAGTTGTGAGCTAGAAAAAAGAGCTTTTAATATTTTTGTACTTTATATCAATTTTCTTTGAGTTCAATATCAGGCCTATTATGATTTTTTGATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E740166" ref_strand="+" ref_description="SGN-E740166 [LC20BD09]">
      <seq>gatctgaagaatccggtgttctataaacccataaaaagcttctgagtttatcggatataatcatcaacctcttcaagggaatccgctaagagagacgcccggcgtgattagatagatcgcatcgagatcgtccccagtcgatggagtagcggtagcagtggtttgattttggttataataagcttgcctttagatattgctgctgacggaagcttgcgaattattttgctcgtggaggatgttcctactgatctattggaggaatttggtttgactgattttcttgag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0101H16.1" temp_strand="-" temp_description="C02SLe0101H16.1  AC215444.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0101H16 sequenced_by:kribb upload_account_name:korea">
        <position start="34652" stop="33765"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34352" g_stop="34065" g_length="288"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="288" r_length="288" r_score="0.979"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0101H16.1" gen_strand="-" ref_id="SGN-E740166" ref_strand="+">
        <total_alignment_score>0.979</total_alignment_score>
        <cumulative_length_of_scored_exons>288</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0101H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E740166" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34352" e_stop="34065"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATCTGAAGAATCCGGTGTTCTATAAACCCATAGAAAGCTTCTGAGTTTATCGGATAGAATCATCAACCTCTTCAAGGGTATCCGCTAAGAGAGACGCCCGGCGTGATTAGATAGATCGGATCGAGATCGTCCCCAGTCGAAGGAGTAGCGGTAGCAGTGGTTTGATTTTGGTTATAATAAGCTTGCCTTTAGATATTGCTGCTGACGGAAGCTTGCGGATTATTTTGCTCGTGGAGGATGTTCCTACTGATCTATTGGAGGAATTTGGTTTGACTGATTTTCTTGAG</genome_strand>
        <mrna_strand>GATCTGAAGAATCCGGTGTTCTATAAACCCATAAAAAGCTTCTGAGTTTATCGGATATAATCATCAACCTCTTCAAGGGAATCCGCTAAGAGAGACGCCCGGCGTGATTAGATAGATCGCATCGAGATCGTCCCCAGTCGATGGAGTAGCGGTAGCAGTGGTTTGATTTTGGTTATAATAAGCTTGCCTTTAGATATTGCTGCTGACGGAAGCTTGCGAATTATTTTGCTCGTGGAGGATGTTCCTACTGATCTATTGGAGGAATTTGGTTTGACTGATTTTCTTGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E316928" ref_strand="+" ref_description="SGN-E316928 [cTOA-27-H23]">
      <seq>tttccagcaaacacacttgtcatccttgagccgatcttgactttggccgctataacttctggtagcgtctgcctcagcaaactgtgacactatatcacgtttacagctcgaagagagaagcagagtactgtgaagaagcgaaaaggggggagaattgggatttcggaagagcagaaaatgggaaactctcagtcgaattcaacgaatccacgttttgatttagccaagagagctttcacagagaggaaattggaagacttgaaatcgttgttcgattcactagctgcacaatcacagagcaatggaaaatacgtttcttcttctgttttcaaggcatatattggagttgaagggccattgggtgatagaatgttcgatttggtcacccagaagcgtaaggatcaaaagcttacatatgaggaccttgtgattgctaaaggaacctatgaaaaagggacaaatgctgatattgaagagtttatctatcagttgttagatgtctttgatgatggcgttgttggaagatcagatctggaagcagtcttgactgcagtactaagaaatatatcttctcatgagagccatcaatctgaacctagtccggacagggaaattctcgacattttccctcatgctgcaaatttgacaacggatgatacaaaatgcgctgaaagttgtatgtcttttgagg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0101H16.1" temp_strand="+" temp_description="C02SLe0101H16.1  AC215444.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0101H16 sequenced_by:kribb upload_account_name:korea">
        <position start="36750" stop="44873"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="37050" g_stop="37279" g_length="230"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="230" r_length="230" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="37280" i_stop="37373" i_length="94">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="37374" g_stop="37476" g_length="103"/>
          <reference_exon_boundary r_type="cDNA" r_start="231" r_stop="333" r_length="103" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="37477" i_stop="37559" i_length="83">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="37560" g_stop="37664" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="334" r_stop="438" r_length="105" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="37665" i_stop="41369" i_length="3705">
            <donor d_prob="0.860" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="41370" g_stop="41455" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="439" r_stop="524" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="41456" i_stop="44406" i_length="2951">
            <donor d_prob="0.914" d_score="1.00"/>
            <acceptor a_prob="0.968" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="44407" g_stop="44573" g_length="167"/>
          <reference_exon_boundary r_type="cDNA" r_start="525" r_stop="691" r_length="167" r_score="0.982"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0101H16.1" gen_strand="+" ref_id="SGN-E316928" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>691</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0101H16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E316928" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="37050" e_stop="37279"/>
          <exon e_start="37374" e_stop="37476"/>
          <exon e_start="37560" e_stop="37664"/>
          <exon e_start="41370" e_stop="41455"/>
          <exon e_start="44407" e_stop="44573"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCCAGCAAACACACTTGTCATCCTTGAGCCGATCTTGACTTTGGCCGCTATAACTTCTGGTAGCGTCTGCCTCAGCAAACTGTGACACTATATCACGTTTACAGCTCGAAGAGAGAAGCAGAGTACTGTGAAGAAGCGAAAAGGGGGGAGAATTGGGATTTCGGAAGAGCAGAAAATGGGAAACTCTCAGTCGAATTCAACGAATCCACGTTTTGATTTAGCCAAGAGGCAATTTCTCTCTAACACTAAGCAATGATTACACAGTTGAATATTATCTGATTCAATTTTGAACTCAAACTGCATATGTTAATTCTTATTGTAGAGCTTTCACAGAGAGGAAATTGGAAGACTTGAAATCGTTGTTCGATTCACTAGCTGCACAATCACAGAGCAATGGAAAATACGTTTCTTCTTCTGTTTTCAAGGTACTTTTTGTCAATTTTTCTGTATTGTCTTGTTATTTTTTTTTTTACAATGAAATTGGGAATTGGGTGTTTGTGCACTATAGGCATATATTGGAGTTGAAGGGCCATTGGGTGATAGAATGTTCGATTTGGTCACCCAGAAGCGTAAGGATCAAAAGCTTACATATGAGGACCTTGTGATTGCTAAAGTAAGTGTTTTTGATCTCATTCCACTGGGTGTTGAACTAGTTACCCTAAAGTTTCCTCATTTGTTGACTTGATGGTATACAAAGGCCTTTTTTGATGGAAGAATTCACCCAAATATCCCCCATCTCAACCCCATAAACTTAAAATAGCTGGCAGTTGTATAATATATATATATATAATCCATGTATAATATGTACATAACCATGTGTAATCTATGTATAGCGACGAAGGATATTTGGGTGAAGATCCTTTTTTTTTATCCGTTTTCCTATTAGCTTTTGTAGTTATGTAACTTAAGATGAAATTTATATGTCCATCCATTGTATTGTATGTTGATGGATTATCTAAGTTTCACGCCAAGCTGGCTGAACACCATGTCTATAAAGAAAACCTGGTGCACTAAGCTCCTCTATTAACGGGTTCATGTGAAGGACCAAATGGTAGTAGGTTTGTTGTATCCCGACTTGCATTTATTCAAGAGGCTGTTTTTACGGCTTAAACCTATGGCCAATATCATAAAAGAACATTTTTCTACACCTATTCATGACCTTTTGGTACGAGCTCAAGTGTATCATATGATCCACCTTCATTATTGTTATATCTTACAGTTGTCGTAATAATAGGACAAACGATTTCCATACTCTGCCCTTCACTCTATAAGAATAACAACATCATGAACATTATTGAATAGTTACAACCTCGATATACAAGGAACTAGATAGATGTTATTACATTTTATTTGAAAAAGAAGTACATCTACAATATGAAAACTACATATGAGTTTTCTATATATGCTCGCAGAAAACATCTAGTTCACAGTAAGGTTGAAAAAAGCGGGTTGTGTTAACCCAGATAGGTTCAGGATTAGGGGAAAGAAATAACCGATTGTGATGAAGCCTTATCCTCATGGTTTTCTATACTTAGCATGATATGGCTACTGGGTTTGGCATTAAATAGGCTAGAGCTTCCATTCTATTGCCTCCTGGTATTGAGGAGTATAACAAGGATTCTCACATCATGCGCGGGTGTGGGTAAAGAAATTAGTTCCACCAAAACAATATGTGGATGTGATGGTAGATGAGAAAGGATTCCCCATTGTAGTGGATATATAGAGTAATGGCAAAGGATTCCCCATTGTAGTGGATATATAGAGTAATATGTTTGTCAAAGATAGTCTATTTCGAATAGGTAGTTGGAACATAGGTTGATTTATAGGGAAGTCAAAGAATCTTTTCTGATAGGTATGAAGAATTAAATGAAATCAATGTCTAGCTGAAACAGGACTATAGGAGAACAACTATGTTGTATGTCTACAAAGAGACTTGGTGTAAAGGAGACAAGGTTAAAGAGATGAACAAAACAAGCTATAATTTGTGGTGTTTTGGTTTGTGAGAGATCCAAGTAGGCACGGGTTAGAAATCATGTAGAACCAGGACATAAATATAAAGTTGCAGAAGTTAAAAACATGTTGATAGGATTATCTTAGTGTGGGAAAGAAAACAAAAAGTACCGTTAGTGCATAGGCTTCACAAATAGAATTAGATGAGGAAGCAGAAACTAAATTTTAAAAATATAGATCTCCATTGGTACAAGGGGGTTCTAGGTGACCAACAAACGTTTGTACAAGGAGATTTGAATGGATATGGGGTTAGATATGTGACACTTAAACTGAGTACATAACAAATATTGTGGTACAATCAATGGAGAAGGGAATGTTTTAAAGTTTGCATTAGCTTCTTATCTCTATTTTTAGGCTTTCAACTAAGACCTACTTTGAAGAAAGAGAACAACATTTGATGGTAATTAAGAGAGAAAGCAGCAATAACCAAATAAACTTCATTCTTACTAAAGGAAGTGACAATTCCACATTTAAGGACAGCAATGTTATACCATGAGAAGACCCAGTCCTAACCATCCAAAGTAGACTGATGCTCTTGCATGTAGAGCGAGAGAATGGAGTGAAAATGGAAAAGAGAAATATGCAACCAGATTTTAATATGCCCACTAAAAGGTTTAAACCACAAAACGTTCAAGGACAAACTATTGGAGGATGGAGCCTGTGACTTAGAAGTAGAGATAAGATCTGCAGAAGTAAATGCAAGTTACATCTTTATTCTTTACTGCATTTGAGTGCAAATGCCATTTTCTATTAGATTGTATGCCAATCTAGTGCATATAGGACTTCCAATAGAATGAAGAGTGATAAGCATGGAAGAGATGTAGAGATTGTCATCATGCTTATGGAAAAGACAAGTGTGCATGTGTGTCTTACCCTGATTTAGTCTACAGAAAACTGAGTTGTAGAAGCTACAGAAGACACTTGGTAGTTTTTGCAGTTTAACTAAGATGAAAGTAAAAGGAATTTTTATATTGGTTAGGATCACAATATTTTTCTTAGTCTTATATGGTTTCTCAGCGCGTTCACCACTAACACGGCTAAGTCGGTTTTCACCGGATCACCAAAACCGCATGCCACATCTTGGTGTGAAAACAAGTGTGTGTGGTGGGTGGGTGGGATTTCAAGACAATGCTGGGGGAGCTATATCCTAACGTCATTGGTATATCAAGGGTCATGCCTTTGAAGATTAGAAGCTGACTGTAGTGCTGGAAATTCCACTAAATCTGAAGCAGATCTCAGAAACTATTCCCTTTTGCATAGTTGTACTATTTGGTTGGAGAGGAACAATTCTTGTTTGAAGGAAAAAAGAGACTTCTTTCTAGAATTAATAATTATTGTCCACAGAATTTATATTTTTGGTGTCACTGCAGTATTGACTTTGAGTCTGTTAGGACCAAGGAGGAGTCACTTGATAATCTATTGTAATGGTATGTTGTTGAGTCATTTACTGCTCTGTACCTTCTTGGTACTTTATAAATAGAACTTGACCTTATCATAAAAAGAAAAAGCGACCACATTTTCATCCCTTGCATAGGTTCTATAGGTTGCCTTCTGTGGGAATTTCATTCCTTGATTCTTGGTAGCCGGATATTTAGTTAATTAGTTTCACTCCACTGGATCCTTTTCTTCAGTCAATCATAGATTGGTTTCTTTGGTAAATCTTGATTGATTTGTACCAGATCTTCATTAACGTATAGTTGACCGGATCATCATTAGCGTATTGCTGTGCATTCAAAACTTCACCATATTAGTGGCATACCCCTTTCAAGGAAAAGATCGTTGTCATCATTAAAATCCTCCCGATACTCGGGGTAGTAATGACTGAAACATGATTTACTTACTATGGTAGGACTCACTGGATAAGCTCAATGGCTGAGCTAGGGCCTAGCTTAATGGGATGAAGAGATGCTTTAACAGAAGACGCAAGACTTAGTCAACTTAATCAACTGCTGGGTATGGTGCTTTCATGTGTCTATCTTACCCTTAAAACAGCCATAATAAGCCTTTTTGATGTTATCTTTTTCTCCTGGAATTTGAGGACTCTCTAGAAATTCATGGCTTCTCCTTATGTGCCATTTCAATTAATCAAGTTTCTTACCAGCATATAGATGCCCCCTCTAGACAACCGTAGTGAAGAGCACAGTTGCCGAGAAAGGTGTTATATTTGTTAACTGTAATTCATTCAGATAATCATTACCCTTTACTGCATAAAGGTGGACATGTATCTCTCTACCTGTGAAGTTTCTATTACGAGTAATAATTGAAAAATATGAACTCATGGTGTATGATTCCACTTTTTATATTGCAGGGAACCTATGAAAAAGGGACAAATGCTGATATTGAAGAGTTTATCTATCAGTTGTTAGATGTCTTTGATGATGGCGTTGTTGGAAGGTAGAACAATAAGCTTCAATATGTTTAAGGCTATGTACAGTTTGGTCCCTCTAGATTTAGTTTTTCATATGTAACTATGCTCGACTTCCAAAATGTGTCAATTATCACTCTTGATCCATGGGGTAAAGTTAAAAAGTCCAAACTAACTTTTTAGTGGAATCGGCAATATCACCAGCTCAAACTTTTTACCTAGAGAACAACTGGAAGAGGTTCTTACTGTAGGTAGGTTGAAGTCATAGAGGGTTGTCGGTCATTTTGATTCGTGAGGGCATCACGTTTTGGGTAAAAGGGTGGACTAGCTATTTGAAGATTTATGTGCTAAATTTCAGTTAGTTTAGTGAGAAGGCTCTCCTAAAAGTACTAGCCAAGGGGGTACACTTGCCATAAGTTGACTTTAAAAAATCTACTCTTTCACTTTCCCCATTGATTCTGCTCCCCCCTGAAAGATGCTGTAATGTGAAGGACATTAGAAAAAAAAAACTTTAAAGTGAAGGATTATTAGAAAAAAATACTGTAAGGTGAAGGGAAGTTACACATTATGTGAAAATCGAGGGGAGTTTTGTTTTACAAGTCTGCAATTAGAGGAAGTAAATTGTAATTACACTATTTTTAATTCAATTAAATGCTTTATCTTTATCCTCCCAAATTAAATTTTAACCCTTTTTCACAGAAAAGCAACTGCTTGGTACAGCTGAGATAGTTTGTGCTCTGTTTTTGCACAGTTGAGGCAGTTATTTTTCCTTCCACACTAGGAGAACCAGGGATAACTTAAACATTCGTTTTATCTTGACCTTGTTTATATTGAACTGACTTGTGAGATTCTCACTTTGGACTTATCTCTTTGTTTTTATTTATTTTAATATTTTTCATTCAAGATACAATTGAGGTATTCTAGTCTTAACACTGACTTGAAAGCTGCTTAGACATCTCAGATTCTTTAGGTCTAGGATACTTTTTTTCATAACTAAGAATCCCTGATGTCTAGTAGTACACGGTTTAAAACTTGGTGGATGATGGTCCACTATACCCTTCTCCACTTAAATTTCCAGCTTTTATAAATGGCAAATGATAATATTTGAAACCACGATGTGTGCCTAAATAACATATTATTTGTTGCGCTTTTACTACGAGTAGACCAATGCCCAGGGGGGCATCTCTTGGACTACTTTAAAATGATAATGATGAGAAGATGATCATTATCAAGATGCTAATGTTATGGAGAGGACGGATCTTAGTAAAAGAATGATCATAATTCCTAGATACGCTCTCAATGAAGACCAGTCAAATGTTAATATAACTGTCAAGCGAAATGGATATCTCGAAAAAGGTTGTGATGCAAGCTTCTGAAAAAATAGGGATTTAAGGCATGTATATTCATTATTAAAAGCTTATATGAAGTTGGTAGAGATTGTTATTGTCACTATCATATGTATGAGTGTGACATTTTTCACAAAAATCGATGTGTCTTTGCCCCCTCATCTTATGATATTCACAACTTCTTTTTTCGTCCTTTACCCTCTCTAATCGAGTGATGGTATAATGATAAATCCAGTTCCCTCAGGCTGTCTTTCTCCGAGGGGATGTTTGCTTCTCTTGGTTTATGCAAAGTTCTCCATGATCAACAGCTTATTAGACTTTCCAAAATTGTTTCTTCTAGTCATCCTTGGGCATCCTGTTCCTTTTCCTGCAGTCATCTTAGTATTATCACTCTTTTCAATAGGTGCATAGTAGACCTTATTGTCTATAGCCTCATCACTCGCCCTGGGTTATTCCTCTTCCGTTAAGCTTTACAATAATTGATCTTCCCAACCCCTTTCCTTGGCTTTCTTCCTCAGGTGGGCTCTCCCTAAGAAGTACAACTAAGCGGGGCTTGCAAACTTTTAACTATTTTTCCATCCTTGCAAGCACTCGATACAAATTTAACCATCAGATTAGTTGGAGAGTCAAGTGATGTTTGTTGCCTTTGAAAGTGCTACATTTCCTCTCTAATAATAAGGTAAAATACTTACAAGAAGGGAGAAAGCCTGGAGCATTACGCTCCATGAAGAAAATGGTGTATTTAAGTTTAGAATGAGGCAACAATACTGCACCTACTTTTACTGGATAGGCATGTATGTTTGTCCACTGTACTCGAAACATCTGGATTGGGCCTCTTTTGTTAAATAATATCATTACTTTTTGAGGTGGAAGTGATATAGAATTTTATTTCTGAGAATGGATCTCCATTGAGAAAAAACAAGAGGAAGAAGGAGGAGGTTCCAGCTTTATTATTCAAGATAGGTAACATAATCACGTCACACTGATTGATAAACATTAAGTAATATGTACATACACTTTTTGAATAAAATGCGATTGACCATGCCTTTGGGGTGTCTTTTGTGGTCTATTTCAGCAAAATAATATTCTGTAACTGAAGTGAAATGAGTTCTTCCCATGAACTAGAAGCTGTCCTTTTTTTTTTTTTTTTTTTTTTTTGTGAAAAACCTAGAAATCATCCTTGTAAGCTGATATGGATGTACAGAGGATCCAACACTGGTTAGTCCATGATAATTGGAAAGAGCATATCATCTGGCATTAGATGACAGATTGTTTCCTGTATTTCAATTTTCAATAGTTGTTGTCAGATGAAAGGTTCATTTCTTCCAGAATCCCTTTTCTTTCTCTTTCTCTTTTTCCTTTTGCACTATGTGGAACATATATTTGTATAATGAGAAGCTTTATCTTCAGTTTATGAGCTTGACTGCCTAAACTTGGATGTCAAATAGATTCATTGAAGCTCTGGAAAAATAGCCCTAGCCTTGTTCGGTTTTAAACACAGAATTGTTCATAATGATTAAACATAGTTCTGGATCCAATATTAGATATCCATACTATTGATTACCAAAAAGAGAAATCAGTACTATTGTTTTCTCCTTTATGGTGGTAAATACATCAGTGAAATCAACTTGCAGATCAGATCTGGAAGCAGTCTTGACTGCAGTACTAAGAAATATATCTTCTCATGAGAGCCATCAATCTGAACCTAGTCCGGACAGGGAAATTCTCGACATTTTCCTCAATGCTGCAAATTTGACAACGGATGATACAAAATGCGCTGAAAGTTGTATGTCTTTTGAGG</genome_strand>
        <mrna_strand>TTTCCAGCAAACACACTTGTCATCCTTGAGCCGATCTTGACTTTGGCCGCTATAACTTCTGGTAGCGTCTGCCTCAGCAAACTGTGACACTATATCACGTTTACAGCTCGAAGAGAGAAGCAGAGTACTGTGAAGAAGCGAAAAGGGGGGAGAATTGGGATTTCGGAAGAGCAGAAAATGGGAAACTCTCAGTCGAATTCAACGAATCCACGTTTTGATTTAGCCAAGAG..............................................................................................AGCTTTCACAGAGAGGAAATTGGAAGACTTGAAATCGTTGTTCGATTCACTAGCTGCACAATCACAGAGCAATGGAAAATACGTTTCTTCTTCTGTTTTCAAG...................................................................................GCATATATTGGAGTTGAAGGGCCATTGGGTGATAGAATGTTCGATTTGGTCACCCAGAAGCGTAAGGATCAAAAGCTTACATATGAGGACCTTGTGATTGCTAAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAACCTATGAAAAAGGGACAAATGCTGATATTGAAGAGTTTATCTATCAGTTGTTAGATGTCTTTGATGATGGCGTTGTTGGAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGATCTGGAAGCAGTCTTGACTGCAGTACTAAGAAATATATCTTCTCATGAGAGCCATCAATCTGAACCTAGTCCGGACAGGGAAATTCTCGACATTTTCCCTCATGCTGCAAATTTGACAACGGATGATACAAAATGCGCTGAAAGTTGTATGTCTTTTGAGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E317133" ref_strand="+" ref_description="SGN-E317133 [cTOA-27-H22]">
      <seq>tttccagcaaacacacttgtcatccttgagccgatcttgactttggccgctataacttctggtagcgtctgcctcagcaaactgtgacactatatcacgtttacagctcgaagagagaagcagagtactgtgaagaagcgannaggggggagaattgggatttcggaagagcagaaaatgggaaactctcagtcgaattca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0101H16.1" temp_strand="+" temp_description="C02SLe0101H16.1  AC215444.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0101H16 sequenced_by:kribb upload_account_name:korea">
        <position start="36750" stop="37550"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="37050" g_stop="37250" g_length="201"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="201" r_length="201" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0101H16.1" gen_strand="+" ref_id="SGN-E317133" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>201</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0101H16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E317133" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="37050" e_stop="37250"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCCAGCAAACACACTTGTCATCCTTGAGCCGATCTTGACTTTGGCCGCTATAACTTCTGGTAGCGTCTGCCTCAGCAAACTGTGACACTATATCACGTTTACAGCTCGAAGAGAGAAGCAGAGTACTGTGAAGAAGCGAAAAGGGGGGAGAATTGGGATTTCGGAAGAGCAGAAAATGGGAAACTCTCAGTCGAATTCA</genome_strand>
        <mrna_strand>TTTCCAGCAAACACACTTGTCATCCTTGAGCCGATCTTGACTTTGGCCGCTATAACTTCTGGTAGCGTCTGCCTCAGCAAACTGTGACACTATATCACGTTTACAGCTCGAAGAGAGAAGCAGAGTACTGTGAAGAAGCGANNAGGGGGGAGAATTGGGATTTCGGAAGAGCAGAAAATGGGAAACTCTCAGTCGAATTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E269627" ref_strand="+" ref_description="SGN-E269627 [cLEM-2-P7]">
      <seq>ctttggccgctataacttctggtagcgtctgcctcagcaaactgtgacactatatcacgtttacagctcgaagagagaagcagagtactgtgaagaagcgaaaaggggggagaattgggatttcggaagagcagaaaatgggaaactctcagtcgaattcaacgaatccacgttttgatttagccaagagagaggaaattggaagacttgaaatcgttgttcgattcactagctgcacaatcacagagcaatggaaaatacgtttcttcttctgttttcaaggcatatattggagttgaagggccattgggtgatagaatgttcgatttggtcacccagaagcgtaaggatcaaaagcttacatatgaggaccttgtgattgctaaaggaacctatgaaaaagggacaaatgctgatattgaagagtttatctatcagttgttagatgtctttgatgatggcgttgttggaagatcagatctggaagcagtcttgactgcagtactaagaaatatatcttctcatgagagccatcaatctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0101H16.1" temp_strand="+" temp_description="C02SLe0101H16.1  AC215444.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0101H16 sequenced_by:kribb upload_account_name:korea">
        <position start="36790" stop="44774"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="37090" g_stop="37279" g_length="190"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="190" r_length="190" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="37280" i_stop="37384" i_length="105">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.067" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="37385" g_stop="37476" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="191" r_stop="282" r_length="92" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="37477" i_stop="37559" i_length="83">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="37560" g_stop="37664" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="283" r_stop="387" r_length="105" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="37665" i_stop="41369" i_length="3705">
            <donor d_prob="0.860" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="41370" g_stop="41455" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="388" r_stop="473" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="41456" i_stop="44406" i_length="2951">
            <donor d_prob="0.914" d_score="1.00"/>
            <acceptor a_prob="0.968" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="44407" g_stop="44474" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="474" r_stop="541" r_length="68" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0101H16.1" gen_strand="+" ref_id="SGN-E269627" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>541</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0101H16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E269627" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="37090" e_stop="37279"/>
          <exon e_start="37385" e_stop="37476"/>
          <exon e_start="37560" e_stop="37664"/>
          <exon e_start="41370" e_stop="41455"/>
          <exon e_start="44407" e_stop="44474"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTGGCCGCTATAACTTCTGGTAGCGTCTGCCTCAGCAAACTGTGACACTATATCACGTTTACAGCTCGAAGAGAGAAGCAGAGTACTGTGAAGAAGCGAAAAGGGGGGAGAATTGGGATTTCGGAAGAGCAGAAAATGGGAAACTCTCAGTCGAATTCAACGAATCCACGTTTTGATTTAGCCAAGAGGCAATTTCTCTCTAACACTAAGCAATGATTACACAGTTGAATATTATCTGATTCAATTTTGAACTCAAACTGCATATGTTAATTCTTATTGTAGAGCTTTCACAGAGAGGAAATTGGAAGACTTGAAATCGTTGTTCGATTCACTAGCTGCACAATCACAGAGCAATGGAAAATACGTTTCTTCTTCTGTTTTCAAGGTACTTTTTGTCAATTTTTCTGTATTGTCTTGTTATTTTTTTTTTTACAATGAAATTGGGAATTGGGTGTTTGTGCACTATAGGCATATATTGGAGTTGAAGGGCCATTGGGTGATAGAATGTTCGATTTGGTCACCCAGAAGCGTAAGGATCAAAAGCTTACATATGAGGACCTTGTGATTGCTAAAGTAAGTGTTTTTGATCTCATTCCACTGGGTGTTGAACTAGTTACCCTAAAGTTTCCTCATTTGTTGACTTGATGGTATACAAAGGCCTTTTTTGATGGAAGAATTCACCCAAATATCCCCCATCTCAACCCCATAAACTTAAAATAGCTGGCAGTTGTATAATATATATATATATAATCCATGTATAATATGTACATAACCATGTGTAATCTATGTATAGCGACGAAGGATATTTGGGTGAAGATCCTTTTTTTTTATCCGTTTTCCTATTAGCTTTTGTAGTTATGTAACTTAAGATGAAATTTATATGTCCATCCATTGTATTGTATGTTGATGGATTATCTAAGTTTCACGCCAAGCTGGCTGAACACCATGTCTATAAAGAAAACCTGGTGCACTAAGCTCCTCTATTAACGGGTTCATGTGAAGGACCAAATGGTAGTAGGTTTGTTGTATCCCGACTTGCATTTATTCAAGAGGCTGTTTTTACGGCTTAAACCTATGGCCAATATCATAAAAGAACATTTTTCTACACCTATTCATGACCTTTTGGTACGAGCTCAAGTGTATCATATGATCCACCTTCATTATTGTTATATCTTACAGTTGTCGTAATAATAGGACAAACGATTTCCATACTCTGCCCTTCACTCTATAAGAATAACAACATCATGAACATTATTGAATAGTTACAACCTCGATATACAAGGAACTAGATAGATGTTATTACATTTTATTTGAAAAAGAAGTACATCTACAATATGAAAACTACATATGAGTTTTCTATATATGCTCGCAGAAAACATCTAGTTCACAGTAAGGTTGAAAAAAGCGGGTTGTGTTAACCCAGATAGGTTCAGGATTAGGGGAAAGAAATAACCGATTGTGATGAAGCCTTATCCTCATGGTTTTCTATACTTAGCATGATATGGCTACTGGGTTTGGCATTAAATAGGCTAGAGCTTCCATTCTATTGCCTCCTGGTATTGAGGAGTATAACAAGGATTCTCACATCATGCGCGGGTGTGGGTAAAGAAATTAGTTCCACCAAAACAATATGTGGATGTGATGGTAGATGAGAAAGGATTCCCCATTGTAGTGGATATATAGAGTAATGGCAAAGGATTCCCCATTGTAGTGGATATATAGAGTAATATGTTTGTCAAAGATAGTCTATTTCGAATAGGTAGTTGGAACATAGGTTGATTTATAGGGAAGTCAAAGAATCTTTTCTGATAGGTATGAAGAATTAAATGAAATCAATGTCTAGCTGAAACAGGACTATAGGAGAACAACTATGTTGTATGTCTACAAAGAGACTTGGTGTAAAGGAGACAAGGTTAAAGAGATGAACAAAACAAGCTATAATTTGTGGTGTTTTGGTTTGTGAGAGATCCAAGTAGGCACGGGTTAGAAATCATGTAGAACCAGGACATAAATATAAAGTTGCAGAAGTTAAAAACATGTTGATAGGATTATCTTAGTGTGGGAAAGAAAACAAAAAGTACCGTTAGTGCATAGGCTTCACAAATAGAATTAGATGAGGAAGCAGAAACTAAATTTTAAAAATATAGATCTCCATTGGTACAAGGGGGTTCTAGGTGACCAACAAACGTTTGTACAAGGAGATTTGAATGGATATGGGGTTAGATATGTGACACTTAAACTGAGTACATAACAAATATTGTGGTACAATCAATGGAGAAGGGAATGTTTTAAAGTTTGCATTAGCTTCTTATCTCTATTTTTAGGCTTTCAACTAAGACCTACTTTGAAGAAAGAGAACAACATTTGATGGTAATTAAGAGAGAAAGCAGCAATAACCAAATAAACTTCATTCTTACTAAAGGAAGTGACAATTCCACATTTAAGGACAGCAATGTTATACCATGAGAAGACCCAGTCCTAACCATCCAAAGTAGACTGATGCTCTTGCATGTAGAGCGAGAGAATGGAGTGAAAATGGAAAAGAGAAATATGCAACCAGATTTTAATATGCCCACTAAAAGGTTTAAACCACAAAACGTTCAAGGACAAACTATTGGAGGATGGAGCCTGTGACTTAGAAGTAGAGATAAGATCTGCAGAAGTAAATGCAAGTTACATCTTTATTCTTTACTGCATTTGAGTGCAAATGCCATTTTCTATTAGATTGTATGCCAATCTAGTGCATATAGGACTTCCAATAGAATGAAGAGTGATAAGCATGGAAGAGATGTAGAGATTGTCATCATGCTTATGGAAAAGACAAGTGTGCATGTGTGTCTTACCCTGATTTAGTCTACAGAAAACTGAGTTGTAGAAGCTACAGAAGACACTTGGTAGTTTTTGCAGTTTAACTAAGATGAAAGTAAAAGGAATTTTTATATTGGTTAGGATCACAATATTTTTCTTAGTCTTATATGGTTTCTCAGCGCGTTCACCACTAACACGGCTAAGTCGGTTTTCACCGGATCACCAAAACCGCATGCCACATCTTGGTGTGAAAACAAGTGTGTGTGGTGGGTGGGTGGGATTTCAAGACAATGCTGGGGGAGCTATATCCTAACGTCATTGGTATATCAAGGGTCATGCCTTTGAAGATTAGAAGCTGACTGTAGTGCTGGAAATTCCACTAAATCTGAAGCAGATCTCAGAAACTATTCCCTTTTGCATAGTTGTACTATTTGGTTGGAGAGGAACAATTCTTGTTTGAAGGAAAAAAGAGACTTCTTTCTAGAATTAATAATTATTGTCCACAGAATTTATATTTTTGGTGTCACTGCAGTATTGACTTTGAGTCTGTTAGGACCAAGGAGGAGTCACTTGATAATCTATTGTAATGGTATGTTGTTGAGTCATTTACTGCTCTGTACCTTCTTGGTACTTTATAAATAGAACTTGACCTTATCATAAAAAGAAAAAGCGACCACATTTTCATCCCTTGCATAGGTTCTATAGGTTGCCTTCTGTGGGAATTTCATTCCTTGATTCTTGGTAGCCGGATATTTAGTTAATTAGTTTCACTCCACTGGATCCTTTTCTTCAGTCAATCATAGATTGGTTTCTTTGGTAAATCTTGATTGATTTGTACCAGATCTTCATTAACGTATAGTTGACCGGATCATCATTAGCGTATTGCTGTGCATTCAAAACTTCACCATATTAGTGGCATACCCCTTTCAAGGAAAAGATCGTTGTCATCATTAAAATCCTCCCGATACTCGGGGTAGTAATGACTGAAACATGATTTACTTACTATGGTAGGACTCACTGGATAAGCTCAATGGCTGAGCTAGGGCCTAGCTTAATGGGATGAAGAGATGCTTTAACAGAAGACGCAAGACTTAGTCAACTTAATCAACTGCTGGGTATGGTGCTTTCATGTGTCTATCTTACCCTTAAAACAGCCATAATAAGCCTTTTTGATGTTATCTTTTTCTCCTGGAATTTGAGGACTCTCTAGAAATTCATGGCTTCTCCTTATGTGCCATTTCAATTAATCAAGTTTCTTACCAGCATATAGATGCCCCCTCTAGACAACCGTAGTGAAGAGCACAGTTGCCGAGAAAGGTGTTATATTTGTTAACTGTAATTCATTCAGATAATCATTACCCTTTACTGCATAAAGGTGGACATGTATCTCTCTACCTGTGAAGTTTCTATTACGAGTAATAATTGAAAAATATGAACTCATGGTGTATGATTCCACTTTTTATATTGCAGGGAACCTATGAAAAAGGGACAAATGCTGATATTGAAGAGTTTATCTATCAGTTGTTAGATGTCTTTGATGATGGCGTTGTTGGAAGGTAGAACAATAAGCTTCAATATGTTTAAGGCTATGTACAGTTTGGTCCCTCTAGATTTAGTTTTTCATATGTAACTATGCTCGACTTCCAAAATGTGTCAATTATCACTCTTGATCCATGGGGTAAAGTTAAAAAGTCCAAACTAACTTTTTAGTGGAATCGGCAATATCACCAGCTCAAACTTTTTACCTAGAGAACAACTGGAAGAGGTTCTTACTGTAGGTAGGTTGAAGTCATAGAGGGTTGTCGGTCATTTTGATTCGTGAGGGCATCACGTTTTGGGTAAAAGGGTGGACTAGCTATTTGAAGATTTATGTGCTAAATTTCAGTTAGTTTAGTGAGAAGGCTCTCCTAAAAGTACTAGCCAAGGGGGTACACTTGCCATAAGTTGACTTTAAAAAATCTACTCTTTCACTTTCCCCATTGATTCTGCTCCCCCCTGAAAGATGCTGTAATGTGAAGGACATTAGAAAAAAAAAACTTTAAAGTGAAGGATTATTAGAAAAAAATACTGTAAGGTGAAGGGAAGTTACACATTATGTGAAAATCGAGGGGAGTTTTGTTTTACAAGTCTGCAATTAGAGGAAGTAAATTGTAATTACACTATTTTTAATTCAATTAAATGCTTTATCTTTATCCTCCCAAATTAAATTTTAACCCTTTTTCACAGAAAAGCAACTGCTTGGTACAGCTGAGATAGTTTGTGCTCTGTTTTTGCACAGTTGAGGCAGTTATTTTTCCTTCCACACTAGGAGAACCAGGGATAACTTAAACATTCGTTTTATCTTGACCTTGTTTATATTGAACTGACTTGTGAGATTCTCACTTTGGACTTATCTCTTTGTTTTTATTTATTTTAATATTTTTCATTCAAGATACAATTGAGGTATTCTAGTCTTAACACTGACTTGAAAGCTGCTTAGACATCTCAGATTCTTTAGGTCTAGGATACTTTTTTTCATAACTAAGAATCCCTGATGTCTAGTAGTACACGGTTTAAAACTTGGTGGATGATGGTCCACTATACCCTTCTCCACTTAAATTTCCAGCTTTTATAAATGGCAAATGATAATATTTGAAACCACGATGTGTGCCTAAATAACATATTATTTGTTGCGCTTTTACTACGAGTAGACCAATGCCCAGGGGGGCATCTCTTGGACTACTTTAAAATGATAATGATGAGAAGATGATCATTATCAAGATGCTAATGTTATGGAGAGGACGGATCTTAGTAAAAGAATGATCATAATTCCTAGATACGCTCTCAATGAAGACCAGTCAAATGTTAATATAACTGTCAAGCGAAATGGATATCTCGAAAAAGGTTGTGATGCAAGCTTCTGAAAAAATAGGGATTTAAGGCATGTATATTCATTATTAAAAGCTTATATGAAGTTGGTAGAGATTGTTATTGTCACTATCATATGTATGAGTGTGACATTTTTCACAAAAATCGATGTGTCTTTGCCCCCTCATCTTATGATATTCACAACTTCTTTTTTCGTCCTTTACCCTCTCTAATCGAGTGATGGTATAATGATAAATCCAGTTCCCTCAGGCTGTCTTTCTCCGAGGGGATGTTTGCTTCTCTTGGTTTATGCAAAGTTCTCCATGATCAACAGCTTATTAGACTTTCCAAAATTGTTTCTTCTAGTCATCCTTGGGCATCCTGTTCCTTTTCCTGCAGTCATCTTAGTATTATCACTCTTTTCAATAGGTGCATAGTAGACCTTATTGTCTATAGCCTCATCACTCGCCCTGGGTTATTCCTCTTCCGTTAAGCTTTACAATAATTGATCTTCCCAACCCCTTTCCTTGGCTTTCTTCCTCAGGTGGGCTCTCCCTAAGAAGTACAACTAAGCGGGGCTTGCAAACTTTTAACTATTTTTCCATCCTTGCAAGCACTCGATACAAATTTAACCATCAGATTAGTTGGAGAGTCAAGTGATGTTTGTTGCCTTTGAAAGTGCTACATTTCCTCTCTAATAATAAGGTAAAATACTTACAAGAAGGGAGAAAGCCTGGAGCATTACGCTCCATGAAGAAAATGGTGTATTTAAGTTTAGAATGAGGCAACAATACTGCACCTACTTTTACTGGATAGGCATGTATGTTTGTCCACTGTACTCGAAACATCTGGATTGGGCCTCTTTTGTTAAATAATATCATTACTTTTTGAGGTGGAAGTGATATAGAATTTTATTTCTGAGAATGGATCTCCATTGAGAAAAAACAAGAGGAAGAAGGAGGAGGTTCCAGCTTTATTATTCAAGATAGGTAACATAATCACGTCACACTGATTGATAAACATTAAGTAATATGTACATACACTTTTTGAATAAAATGCGATTGACCATGCCTTTGGGGTGTCTTTTGTGGTCTATTTCAGCAAAATAATATTCTGTAACTGAAGTGAAATGAGTTCTTCCCATGAACTAGAAGCTGTCCTTTTTTTTTTTTTTTTTTTTTTTTGTGAAAAACCTAGAAATCATCCTTGTAAGCTGATATGGATGTACAGAGGATCCAACACTGGTTAGTCCATGATAATTGGAAAGAGCATATCATCTGGCATTAGATGACAGATTGTTTCCTGTATTTCAATTTTCAATAGTTGTTGTCAGATGAAAGGTTCATTTCTTCCAGAATCCCTTTTCTTTCTCTTTCTCTTTTTCCTTTTGCACTATGTGGAACATATATTTGTATAATGAGAAGCTTTATCTTCAGTTTATGAGCTTGACTGCCTAAACTTGGATGTCAAATAGATTCATTGAAGCTCTGGAAAAATAGCCCTAGCCTTGTTCGGTTTTAAACACAGAATTGTTCATAATGATTAAACATAGTTCTGGATCCAATATTAGATATCCATACTATTGATTACCAAAAAGAGAAATCAGTACTATTGTTTTCTCCTTTATGGTGGTAAATACATCAGTGAAATCAACTTGCAGATCAGATCTGGAAGCAGTCTTGACTGCAGTACTAAGAAATATATCTTCTCATGAGAGCCATCAATCTG</genome_strand>
        <mrna_strand>CTTTGGCCGCTATAACTTCTGGTAGCGTCTGCCTCAGCAAACTGTGACACTATATCACGTTTACAGCTCGAAGAGAGAAGCAGAGTACTGTGAAGAAGCGAAAAGGGGGGAGAATTGGGATTTCGGAAGAGCAGAAAATGGGAAACTCTCAGTCGAATTCAACGAATCCACGTTTTGATTTAGCCAAGAG.........................................................................................................AGAGGAAATTGGAAGACTTGAAATCGTTGTTCGATTCACTAGCTGCACAATCACAGAGCAATGGAAAATACGTTTCTTCTTCTGTTTTCAAG...................................................................................GCATATATTGGAGTTGAAGGGCCATTGGGTGATAGAATGTTCGATTTGGTCACCCAGAAGCGTAAGGATCAAAAGCTTACATATGAGGACCTTGTGATTGCTAAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAACCTATGAAAAAGGGACAAATGCTGATATTGAAGAGTTTATCTATCAGTTGTTAGATGTCTTTGATGATGGCGTTGTTGGAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGATCTGGAAGCAGTCTTGACTGCAGTACTAAGAAATATATCTTCTCATGAGAGCCATCAATCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E720955" ref_strand="+" ref_description="SGN-E720955 [FC12BD10]">
      <seq>atcggccgaattggtgacactatatcacgtttacagctcgaagagagaagcagagtactgtgaagaagcgaaaaggggggagaattgggatttcggaagagcagaaaatgggaaactctcagtcgaattcaacgaatccacgttttgatttagccaagagagctttcacagagaggaaattggaagacttgaaatcgttgttcgattcactagctgcacaatcacagagcaatggaaaatacgtttcttcttctgttttcaaggcatatattggagttgaagggccattgggtgatagaatgttcgatttggtcacccagaagcgtaaggatcaaaagcttacatatgaggaccttgtgattgctaaaggaacctatgaaaaagggacaaatgctgatattgaagagtttatctatcagttgttagatgtctttgatgatggcgttgttggaagatcagatctggaagcagtcttgactgcagtactaagaaatatatcttctcatgagagccatcaatctgaacctagtccggacagggaaattctcgacattttcctcaatgctgcaaatttgacaacggatgatacaaaatgcgctgaaagttgtatgtcttttgaggaatttaaaagttggtgtgcccgtcttccatcagtaaggaagtttctcggaactctgttgtctacacgtgattcaggctctgaggttcctatgctagtatacccagagaacattgatcctgctgtaatattgttaagaaaggaatatgcttggcatataggtgggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0101H16.1" temp_strand="+" temp_description="C02SLe0101H16.1  AC215444.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0101H16 sequenced_by:kribb upload_account_name:korea">
        <position start="36823" stop="46368"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="37119" g_stop="37279" g_length="161"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="160" r_length="160" r_score="0.944"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="37280" i_stop="37373" i_length="94">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="37374" g_stop="37476" g_length="103"/>
          <reference_exon_boundary r_type="cDNA" r_start="161" r_stop="263" r_length="103" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="37477" i_stop="37559" i_length="83">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="37560" g_stop="37664" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="264" r_stop="368" r_length="105" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="37665" i_stop="41369" i_length="3705">
            <donor d_prob="0.860" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="41370" g_stop="41455" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="369" r_stop="454" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="41456" i_stop="44406" i_length="2951">
            <donor d_prob="0.914" d_score="1.00"/>
            <acceptor a_prob="0.968" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="44407" g_stop="44648" g_length="242"/>
          <reference_exon_boundary r_type="cDNA" r_start="455" r_stop="696" r_length="242" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="44649" i_stop="45978" i_length="1330">
            <donor d_prob="0.959" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="45979" g_stop="46068" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="697" r_stop="786" r_length="90" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0101H16.1" gen_strand="+" ref_id="SGN-E720955" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>787</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0101H16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E720955" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="37119" e_stop="37279"/>
          <exon e_start="37374" e_stop="37476"/>
          <exon e_start="37560" e_stop="37664"/>
          <exon e_start="41370" e_stop="41455"/>
          <exon e_start="44407" e_stop="44648"/>
          <exon e_start="45979" e_stop="46068"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCCTCAGCAAACTGTGACACTATATCACGTTTACAGCTCGAAGAGAGAAGCAGAGTACTGTGAAGAAGCGAAAAGGGGGGAGAATTGGGATTTCGGAAGAGCAGAAAATGGGAAACTCTCAGTCGAATTCAACGAATCCACGTTTTGATTTAGCCAAGAGGCAATTTCTCTCTAACACTAAGCAATGATTACACAGTTGAATATTATCTGATTCAATTTTGAACTCAAACTGCATATGTTAATTCTTATTGTAGAGCTTTCACAGAGAGGAAATTGGAAGACTTGAAATCGTTGTTCGATTCACTAGCTGCACAATCACAGAGCAATGGAAAATACGTTTCTTCTTCTGTTTTCAAGGTACTTTTTGTCAATTTTTCTGTATTGTCTTGTTATTTTTTTTTTTACAATGAAATTGGGAATTGGGTGTTTGTGCACTATAGGCATATATTGGAGTTGAAGGGCCATTGGGTGATAGAATGTTCGATTTGGTCACCCAGAAGCGTAAGGATCAAAAGCTTACATATGAGGACCTTGTGATTGCTAAAGTAAGTGTTTTTGATCTCATTCCACTGGGTGTTGAACTAGTTACCCTAAAGTTTCCTCATTTGTTGACTTGATGGTATACAAAGGCCTTTTTTGATGGAAGAATTCACCCAAATATCCCCCATCTCAACCCCATAAACTTAAAATAGCTGGCAGTTGTATAATATATATATATATAATCCATGTATAATATGTACATAACCATGTGTAATCTATGTATAGCGACGAAGGATATTTGGGTGAAGATCCTTTTTTTTTATCCGTTTTCCTATTAGCTTTTGTAGTTATGTAACTTAAGATGAAATTTATATGTCCATCCATTGTATTGTATGTTGATGGATTATCTAAGTTTCACGCCAAGCTGGCTGAACACCATGTCTATAAAGAAAACCTGGTGCACTAAGCTCCTCTATTAACGGGTTCATGTGAAGGACCAAATGGTAGTAGGTTTGTTGTATCCCGACTTGCATTTATTCAAGAGGCTGTTTTTACGGCTTAAACCTATGGCCAATATCATAAAAGAACATTTTTCTACACCTATTCATGACCTTTTGGTACGAGCTCAAGTGTATCATATGATCCACCTTCATTATTGTTATATCTTACAGTTGTCGTAATAATAGGACAAACGATTTCCATACTCTGCCCTTCACTCTATAAGAATAACAACATCATGAACATTATTGAATAGTTACAACCTCGATATACAAGGAACTAGATAGATGTTATTACATTTTATTTGAAAAAGAAGTACATCTACAATATGAAAACTACATATGAGTTTTCTATATATGCTCGCAGAAAACATCTAGTTCACAGTAAGGTTGAAAAAAGCGGGTTGTGTTAACCCAGATAGGTTCAGGATTAGGGGAAAGAAATAACCGATTGTGATGAAGCCTTATCCTCATGGTTTTCTATACTTAGCATGATATGGCTACTGGGTTTGGCATTAAATAGGCTAGAGCTTCCATTCTATTGCCTCCTGGTATTGAGGAGTATAACAAGGATTCTCACATCATGCGCGGGTGTGGGTAAAGAAATTAGTTCCACCAAAACAATATGTGGATGTGATGGTAGATGAGAAAGGATTCCCCATTGTAGTGGATATATAGAGTAATGGCAAAGGATTCCCCATTGTAGTGGATATATAGAGTAATATGTTTGTCAAAGATAGTCTATTTCGAATAGGTAGTTGGAACATAGGTTGATTTATAGGGAAGTCAAAGAATCTTTTCTGATAGGTATGAAGAATTAAATGAAATCAATGTCTAGCTGAAACAGGACTATAGGAGAACAACTATGTTGTATGTCTACAAAGAGACTTGGTGTAAAGGAGACAAGGTTAAAGAGATGAACAAAACAAGCTATAATTTGTGGTGTTTTGGTTTGTGAGAGATCCAAGTAGGCACGGGTTAGAAATCATGTAGAACCAGGACATAAATATAAAGTTGCAGAAGTTAAAAACATGTTGATAGGATTATCTTAGTGTGGGAAAGAAAACAAAAAGTACCGTTAGTGCATAGGCTTCACAAATAGAATTAGATGAGGAAGCAGAAACTAAATTTTAAAAATATAGATCTCCATTGGTACAAGGGGGTTCTAGGTGACCAACAAACGTTTGTACAAGGAGATTTGAATGGATATGGGGTTAGATATGTGACACTTAAACTGAGTACATAACAAATATTGTGGTACAATCAATGGAGAAGGGAATGTTTTAAAGTTTGCATTAGCTTCTTATCTCTATTTTTAGGCTTTCAACTAAGACCTACTTTGAAGAAAGAGAACAACATTTGATGGTAATTAAGAGAGAAAGCAGCAATAACCAAATAAACTTCATTCTTACTAAAGGAAGTGACAATTCCACATTTAAGGACAGCAATGTTATACCATGAGAAGACCCAGTCCTAACCATCCAAAGTAGACTGATGCTCTTGCATGTAGAGCGAGAGAATGGAGTGAAAATGGAAAAGAGAAATATGCAACCAGATTTTAATATGCCCACTAAAAGGTTTAAACCACAAAACGTTCAAGGACAAACTATTGGAGGATGGAGCCTGTGACTTAGAAGTAGAGATAAGATCTGCAGAAGTAAATGCAAGTTACATCTTTATTCTTTACTGCATTTGAGTGCAAATGCCATTTTCTATTAGATTGTATGCCAATCTAGTGCATATAGGACTTCCAATAGAATGAAGAGTGATAAGCATGGAAGAGATGTAGAGATTGTCATCATGCTTATGGAAAAGACAAGTGTGCATGTGTGTCTTACCCTGATTTAGTCTACAGAAAACTGAGTTGTAGAAGCTACAGAAGACACTTGGTAGTTTTTGCAGTTTAACTAAGATGAAAGTAAAAGGAATTTTTATATTGGTTAGGATCACAATATTTTTCTTAGTCTTATATGGTTTCTCAGCGCGTTCACCACTAACACGGCTAAGTCGGTTTTCACCGGATCACCAAAACCGCATGCCACATCTTGGTGTGAAAACAAGTGTGTGTGGTGGGTGGGTGGGATTTCAAGACAATGCTGGGGGAGCTATATCCTAACGTCATTGGTATATCAAGGGTCATGCCTTTGAAGATTAGAAGCTGACTGTAGTGCTGGAAATTCCACTAAATCTGAAGCAGATCTCAGAAACTATTCCCTTTTGCATAGTTGTACTATTTGGTTGGAGAGGAACAATTCTTGTTTGAAGGAAAAAAGAGACTTCTTTCTAGAATTAATAATTATTGTCCACAGAATTTATATTTTTGGTGTCACTGCAGTATTGACTTTGAGTCTGTTAGGACCAAGGAGGAGTCACTTGATAATCTATTGTAATGGTATGTTGTTGAGTCATTTACTGCTCTGTACCTTCTTGGTACTTTATAAATAGAACTTGACCTTATCATAAAAAGAAAAAGCGACCACATTTTCATCCCTTGCATAGGTTCTATAGGTTGCCTTCTGTGGGAATTTCATTCCTTGATTCTTGGTAGCCGGATATTTAGTTAATTAGTTTCACTCCACTGGATCCTTTTCTTCAGTCAATCATAGATTGGTTTCTTTGGTAAATCTTGATTGATTTGTACCAGATCTTCATTAACGTATAGTTGACCGGATCATCATTAGCGTATTGCTGTGCATTCAAAACTTCACCATATTAGTGGCATACCCCTTTCAAGGAAAAGATCGTTGTCATCATTAAAATCCTCCCGATACTCGGGGTAGTAATGACTGAAACATGATTTACTTACTATGGTAGGACTCACTGGATAAGCTCAATGGCTGAGCTAGGGCCTAGCTTAATGGGATGAAGAGATGCTTTAACAGAAGACGCAAGACTTAGTCAACTTAATCAACTGCTGGGTATGGTGCTTTCATGTGTCTATCTTACCCTTAAAACAGCCATAATAAGCCTTTTTGATGTTATCTTTTTCTCCTGGAATTTGAGGACTCTCTAGAAATTCATGGCTTCTCCTTATGTGCCATTTCAATTAATCAAGTTTCTTACCAGCATATAGATGCCCCCTCTAGACAACCGTAGTGAAGAGCACAGTTGCCGAGAAAGGTGTTATATTTGTTAACTGTAATTCATTCAGATAATCATTACCCTTTACTGCATAAAGGTGGACATGTATCTCTCTACCTGTGAAGTTTCTATTACGAGTAATAATTGAAAAATATGAACTCATGGTGTATGATTCCACTTTTTATATTGCAGGGAACCTATGAAAAAGGGACAAATGCTGATATTGAAGAGTTTATCTATCAGTTGTTAGATGTCTTTGATGATGGCGTTGTTGGAAGGTAGAACAATAAGCTTCAATATGTTTAAGGCTATGTACAGTTTGGTCCCTCTAGATTTAGTTTTTCATATGTAACTATGCTCGACTTCCAAAATGTGTCAATTATCACTCTTGATCCATGGGGTAAAGTTAAAAAGTCCAAACTAACTTTTTAGTGGAATCGGCAATATCACCAGCTCAAACTTTTTACCTAGAGAACAACTGGAAGAGGTTCTTACTGTAGGTAGGTTGAAGTCATAGAGGGTTGTCGGTCATTTTGATTCGTGAGGGCATCACGTTTTGGGTAAAAGGGTGGACTAGCTATTTGAAGATTTATGTGCTAAATTTCAGTTAGTTTAGTGAGAAGGCTCTCCTAAAAGTACTAGCCAAGGGGGTACACTTGCCATAAGTTGACTTTAAAAAATCTACTCTTTCACTTTCCCCATTGATTCTGCTCCCCCCTGAAAGATGCTGTAATGTGAAGGACATTAGAAAAAAAAAACTTTAAAGTGAAGGATTATTAGAAAAAAATACTGTAAGGTGAAGGGAAGTTACACATTATGTGAAAATCGAGGGGAGTTTTGTTTTACAAGTCTGCAATTAGAGGAAGTAAATTGTAATTACACTATTTTTAATTCAATTAAATGCTTTATCTTTATCCTCCCAAATTAAATTTTAACCCTTTTTCACAGAAAAGCAACTGCTTGGTACAGCTGAGATAGTTTGTGCTCTGTTTTTGCACAGTTGAGGCAGTTATTTTTCCTTCCACACTAGGAGAACCAGGGATAACTTAAACATTCGTTTTATCTTGACCTTGTTTATATTGAACTGACTTGTGAGATTCTCACTTTGGACTTATCTCTTTGTTTTTATTTATTTTAATATTTTTCATTCAAGATACAATTGAGGTATTCTAGTCTTAACACTGACTTGAAAGCTGCTTAGACATCTCAGATTCTTTAGGTCTAGGATACTTTTTTTCATAACTAAGAATCCCTGATGTCTAGTAGTACACGGTTTAAAACTTGGTGGATGATGGTCCACTATACCCTTCTCCACTTAAATTTCCAGCTTTTATAAATGGCAAATGATAATATTTGAAACCACGATGTGTGCCTAAATAACATATTATTTGTTGCGCTTTTACTACGAGTAGACCAATGCCCAGGGGGGCATCTCTTGGACTACTTTAAAATGATAATGATGAGAAGATGATCATTATCAAGATGCTAATGTTATGGAGAGGACGGATCTTAGTAAAAGAATGATCATAATTCCTAGATACGCTCTCAATGAAGACCAGTCAAATGTTAATATAACTGTCAAGCGAAATGGATATCTCGAAAAAGGTTGTGATGCAAGCTTCTGAAAAAATAGGGATTTAAGGCATGTATATTCATTATTAAAAGCTTATATGAAGTTGGTAGAGATTGTTATTGTCACTATCATATGTATGAGTGTGACATTTTTCACAAAAATCGATGTGTCTTTGCCCCCTCATCTTATGATATTCACAACTTCTTTTTTCGTCCTTTACCCTCTCTAATCGAGTGATGGTATAATGATAAATCCAGTTCCCTCAGGCTGTCTTTCTCCGAGGGGATGTTTGCTTCTCTTGGTTTATGCAAAGTTCTCCATGATCAACAGCTTATTAGACTTTCCAAAATTGTTTCTTCTAGTCATCCTTGGGCATCCTGTTCCTTTTCCTGCAGTCATCTTAGTATTATCACTCTTTTCAATAGGTGCATAGTAGACCTTATTGTCTATAGCCTCATCACTCGCCCTGGGTTATTCCTCTTCCGTTAAGCTTTACAATAATTGATCTTCCCAACCCCTTTCCTTGGCTTTCTTCCTCAGGTGGGCTCTCCCTAAGAAGTACAACTAAGCGGGGCTTGCAAACTTTTAACTATTTTTCCATCCTTGCAAGCACTCGATACAAATTTAACCATCAGATTAGTTGGAGAGTCAAGTGATGTTTGTTGCCTTTGAAAGTGCTACATTTCCTCTCTAATAATAAGGTAAAATACTTACAAGAAGGGAGAAAGCCTGGAGCATTACGCTCCATGAAGAAAATGGTGTATTTAAGTTTAGAATGAGGCAACAATACTGCACCTACTTTTACTGGATAGGCATGTATGTTTGTCCACTGTACTCGAAACATCTGGATTGGGCCTCTTTTGTTAAATAATATCATTACTTTTTGAGGTGGAAGTGATATAGAATTTTATTTCTGAGAATGGATCTCCATTGAGAAAAAACAAGAGGAAGAAGGAGGAGGTTCCAGCTTTATTATTCAAGATAGGTAACATAATCACGTCACACTGATTGATAAACATTAAGTAATATGTACATACACTTTTTGAATAAAATGCGATTGACCATGCCTTTGGGGTGTCTTTTGTGGTCTATTTCAGCAAAATAATATTCTGTAACTGAAGTGAAATGAGTTCTTCCCATGAACTAGAAGCTGTCCTTTTTTTTTTTTTTTTTTTTTTTTGTGAAAAACCTAGAAATCATCCTTGTAAGCTGATATGGATGTACAGAGGATCCAACACTGGTTAGTCCATGATAATTGGAAAGAGCATATCATCTGGCATTAGATGACAGATTGTTTCCTGTATTTCAATTTTCAATAGTTGTTGTCAGATGAAAGGTTCATTTCTTCCAGAATCCCTTTTCTTTCTCTTTCTCTTTTTCCTTTTGCACTATGTGGAACATATATTTGTATAATGAGAAGCTTTATCTTCAGTTTATGAGCTTGACTGCCTAAACTTGGATGTCAAATAGATTCATTGAAGCTCTGGAAAAATAGCCCTAGCCTTGTTCGGTTTTAAACACAGAATTGTTCATAATGATTAAACATAGTTCTGGATCCAATATTAGATATCCATACTATTGATTACCAAAAAGAGAAATCAGTACTATTGTTTTCTCCTTTATGGTGGTAAATACATCAGTGAAATCAACTTGCAGATCAGATCTGGAAGCAGTCTTGACTGCAGTACTAAGAAATATATCTTCTCATGAGAGCCATCAATCTGAACCTAGTCCGGACAGGGAAATTCTCGACATTTTCCTCAATGCTGCAAATTTGACAACGGATGATACAAAATGCGCTGAAAGTTGTATGTCTTTTGAGGAATTTAAAAGTTGGTGTGCCCGTCTTCCATCAGTAAGGAAGTTTCTCGGAACTCTGTTGTCTACACGTGATTCAGGTTTCTGCTTTACAGTTCATCTTGTGTTTTCTATTTCTGTATTTCCACTTTTTTTCCTTGTCATTTGTAGTTTCTCTTAGAGGAATATCTTTTCTACATATTGGACATTGCTTACTGGGTGAATTTCTGTTGGGCTTAAATGTTAGCTTTTCTAACATTACTTCTATATTTGCTGAAACTTCTATGACAACTATGCATAATACTAGCTTTTCCATGTAATAGACATTTTACTTGTGTTCTCTTTGAAACTTAAATGTTATCATACATATGCCGGAGTTGTTAATTATACTGTTGTAGTTGCTGTTATGGGGATTCTCATAACCAGTAGCGTGCAAATGATTTTAAGTAAGCGGTGTCAACAATAAAATACGAGAACAAACGAGAATTCATTGTGATGATATCATATTGAAAAGGCAATCTAGATTTTAGTACTAAACATAATTTAAGCATATTGCCCAGTGGCATATCTAGGTGTGCGCCACGCTCAAAGTGTGATATGGTGCAACGGTTATTGGGTATACCTCTCTAAGTGAGGCCGGGGTTCAAAATCTATGTCTATCTTGTTATTTTTTTACTTCTTTCCCCATGCCTTTTGCATTTTAATTAAATTTTTTTTTTCTATCTGTGTTTAGTTTATTCTTCCAAAATTTCCAAGAATTCCTGTTCTCATTTTGTCGTCATAAAAATATATATTATTAAACCAAATATGTAAATTAAAATTAGTAGCAGTGAAGGATATAGCATATAGCCAGTGAGTTCAACTGATTCAAGACAAAATATCAGTACATATGTAACTATATAAAAATAATTAACTTTGAACATAAAATTCCAAAAGCATAATGGATCCAATGGTAAGAACTTAAAGGTTGAAACTCGTCAAAAATAACCTCATCGTAATAGTGCACCCATATTTTCGAATTCATGGATCTTCCTTCTGCATATTGCTAGAAGTCTTTTCGACGAGTTTTCATTCTTTAATTTGTATAATGATAACCTCATCAGAGATGCTTTAAACTAAGTCCTTTTTCATTTTGAGACACCAAAAGGAGGTGTAGCATAGTAATTTAGTTGATTGTTAGTGTATGACGATTTGGCTTCAATTCTTTGTAACCATGACTTTACTTATAACAACTCTAGAATATTGTCAGTTATGCACATTTAAGTTTGTGCAAAGAAATCTTTTTTTTAAAAAAATAATATTCATTCCACTTCTCCACCTCCAAAAATGAAAAAAAAACCCCAAAAAATGGTGAATTATTTCCCCAATTGCAAAACAGTGGTCAAGCTAGGGTGTAAACAGGGTTTACTAATCTATTAGTATTTTTTGCAGGCTCTGAGGTTCCTATGCTAGTATACCCAGAGAACATTGATCCTGCTGTAATATTGTTAAGAAAGGAATATGCTTGGCATATAGGTGGGG</genome_strand>
        <mrna_strand>ATCGGCCG-AATTGGTGACACTATATCACGTTTACAGCTCGAAGAGAGAAGCAGAGTACTGTGAAGAAGCGAAAAGGGGGGAGAATTGGGATTTCGGAAGAGCAGAAAATGGGAAACTCTCAGTCGAATTCAACGAATCCACGTTTTGATTTAGCCAAGAG..............................................................................................AGCTTTCACAGAGAGGAAATTGGAAGACTTGAAATCGTTGTTCGATTCACTAGCTGCACAATCACAGAGCAATGGAAAATACGTTTCTTCTTCTGTTTTCAAG...................................................................................GCATATATTGGAGTTGAAGGGCCATTGGGTGATAGAATGTTCGATTTGGTCACCCAGAAGCGTAAGGATCAAAAGCTTACATATGAGGACCTTGTGATTGCTAAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAACCTATGAAAAAGGGACAAATGCTGATATTGAAGAGTTTATCTATCAGTTGTTAGATGTCTTTGATGATGGCGTTGTTGGAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGATCTGGAAGCAGTCTTGACTGCAGTACTAAGAAATATATCTTCTCATGAGAGCCATCAATCTGAACCTAGTCCGGACAGGGAAATTCTCGACATTTTCCTCAATGCTGCAAATTTGACAACGGATGATACAAAATGCGCTGAAAGTTGTATGTCTTTTGAGGAATTTAAAAGTTGGTGTGCCCGTCTTCCATCAGTAAGGAAGTTTCTCGGAACTCTGTTGTCTACACGTGATTCAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTGAGGTTCCTATGCTAGTATACCCAGAGAACATTGATCCTGCTGTAATATTGTTAAGAAAGGAATATGCTTGGCATATAGGTGGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E300021" ref_strand="+" ref_description="SGN-E300021 [cLEW-11-B24]">
      <seq>acgtttacagctcgaagagagaagcagagtactgtgaagaagcgaaaaggggggagaattgggatttctgaagagcacaaaatgggaaactctcagtcgaattcaacgaatccacgttttgatttagccaagagagctttcacagagaggaaattggaagacttgaaatcgttgttcgattcactagctgcacaatcacagagcaatggaaaatacgtttcttcttctgttttcaaggcatatattggagttgaagggccattgggtgatagaatgttcgatttggtcacccagaagcgtaaggatcaaaagcttacatatgaggaccttgtgattgctcaaggaacctatgaaaaagggacaaatgctgatattgaagagtttatctatcagttgttagatgtctttgatgatggcgttgttggaagatcagatctggaagcagtcttgactgcagtactaagaaatatatattctcatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0101H16.1" temp_strand="+" temp_description="C02SLe0101H16.1  AC215444.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0101H16 sequenced_by:kribb upload_account_name:korea">
        <position start="36846" stop="44759"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="37146" g_stop="37279" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="134" r_length="134" r_score="0.985"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="37280" i_stop="37373" i_length="94">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="37374" g_stop="37476" g_length="103"/>
          <reference_exon_boundary r_type="cDNA" r_start="135" r_stop="237" r_length="103" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="37477" i_stop="37559" i_length="83">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="37560" g_stop="37664" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="238" r_stop="342" r_length="105" r_score="0.990"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="37665" i_stop="41369" i_length="3705">
            <donor d_prob="0.860" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="41370" g_stop="41455" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="343" r_stop="428" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="41456" i_stop="44406" i_length="2951">
            <donor d_prob="0.914" d_score="1.00"/>
            <acceptor a_prob="0.968" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="44407" g_stop="44459" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="429" r_stop="481" r_length="53" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0101H16.1" gen_strand="+" ref_id="SGN-E300021" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>481</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0101H16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E300021" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="37146" e_stop="37279"/>
          <exon e_start="37374" e_stop="37476"/>
          <exon e_start="37560" e_stop="37664"/>
          <exon e_start="41370" e_stop="41455"/>
          <exon e_start="44407" e_stop="44459"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACGTTTACAGCTCGAAGAGAGAAGCAGAGTACTGTGAAGAAGCGAAAAGGGGGGAGAATTGGGATTTCGGAAGAGCAGAAAATGGGAAACTCTCAGTCGAATTCAACGAATCCACGTTTTGATTTAGCCAAGAGGCAATTTCTCTCTAACACTAAGCAATGATTACACAGTTGAATATTATCTGATTCAATTTTGAACTCAAACTGCATATGTTAATTCTTATTGTAGAGCTTTCACAGAGAGGAAATTGGAAGACTTGAAATCGTTGTTCGATTCACTAGCTGCACAATCACAGAGCAATGGAAAATACGTTTCTTCTTCTGTTTTCAAGGTACTTTTTGTCAATTTTTCTGTATTGTCTTGTTATTTTTTTTTTTACAATGAAATTGGGAATTGGGTGTTTGTGCACTATAGGCATATATTGGAGTTGAAGGGCCATTGGGTGATAGAATGTTCGATTTGGTCACCCAGAAGCGTAAGGATCAAAAGCTTACATATGAGGACCTTGTGATTGCTAAAGTAAGTGTTTTTGATCTCATTCCACTGGGTGTTGAACTAGTTACCCTAAAGTTTCCTCATTTGTTGACTTGATGGTATACAAAGGCCTTTTTTGATGGAAGAATTCACCCAAATATCCCCCATCTCAACCCCATAAACTTAAAATAGCTGGCAGTTGTATAATATATATATATATAATCCATGTATAATATGTACATAACCATGTGTAATCTATGTATAGCGACGAAGGATATTTGGGTGAAGATCCTTTTTTTTTATCCGTTTTCCTATTAGCTTTTGTAGTTATGTAACTTAAGATGAAATTTATATGTCCATCCATTGTATTGTATGTTGATGGATTATCTAAGTTTCACGCCAAGCTGGCTGAACACCATGTCTATAAAGAAAACCTGGTGCACTAAGCTCCTCTATTAACGGGTTCATGTGAAGGACCAAATGGTAGTAGGTTTGTTGTATCCCGACTTGCATTTATTCAAGAGGCTGTTTTTACGGCTTAAACCTATGGCCAATATCATAAAAGAACATTTTTCTACACCTATTCATGACCTTTTGGTACGAGCTCAAGTGTATCATATGATCCACCTTCATTATTGTTATATCTTACAGTTGTCGTAATAATAGGACAAACGATTTCCATACTCTGCCCTTCACTCTATAAGAATAACAACATCATGAACATTATTGAATAGTTACAACCTCGATATACAAGGAACTAGATAGATGTTATTACATTTTATTTGAAAAAGAAGTACATCTACAATATGAAAACTACATATGAGTTTTCTATATATGCTCGCAGAAAACATCTAGTTCACAGTAAGGTTGAAAAAAGCGGGTTGTGTTAACCCAGATAGGTTCAGGATTAGGGGAAAGAAATAACCGATTGTGATGAAGCCTTATCCTCATGGTTTTCTATACTTAGCATGATATGGCTACTGGGTTTGGCATTAAATAGGCTAGAGCTTCCATTCTATTGCCTCCTGGTATTGAGGAGTATAACAAGGATTCTCACATCATGCGCGGGTGTGGGTAAAGAAATTAGTTCCACCAAAACAATATGTGGATGTGATGGTAGATGAGAAAGGATTCCCCATTGTAGTGGATATATAGAGTAATGGCAAAGGATTCCCCATTGTAGTGGATATATAGAGTAATATGTTTGTCAAAGATAGTCTATTTCGAATAGGTAGTTGGAACATAGGTTGATTTATAGGGAAGTCAAAGAATCTTTTCTGATAGGTATGAAGAATTAAATGAAATCAATGTCTAGCTGAAACAGGACTATAGGAGAACAACTATGTTGTATGTCTACAAAGAGACTTGGTGTAAAGGAGACAAGGTTAAAGAGATGAACAAAACAAGCTATAATTTGTGGTGTTTTGGTTTGTGAGAGATCCAAGTAGGCACGGGTTAGAAATCATGTAGAACCAGGACATAAATATAAAGTTGCAGAAGTTAAAAACATGTTGATAGGATTATCTTAGTGTGGGAAAGAAAACAAAAAGTACCGTTAGTGCATAGGCTTCACAAATAGAATTAGATGAGGAAGCAGAAACTAAATTTTAAAAATATAGATCTCCATTGGTACAAGGGGGTTCTAGGTGACCAACAAACGTTTGTACAAGGAGATTTGAATGGATATGGGGTTAGATATGTGACACTTAAACTGAGTACATAACAAATATTGTGGTACAATCAATGGAGAAGGGAATGTTTTAAAGTTTGCATTAGCTTCTTATCTCTATTTTTAGGCTTTCAACTAAGACCTACTTTGAAGAAAGAGAACAACATTTGATGGTAATTAAGAGAGAAAGCAGCAATAACCAAATAAACTTCATTCTTACTAAAGGAAGTGACAATTCCACATTTAAGGACAGCAATGTTATACCATGAGAAGACCCAGTCCTAACCATCCAAAGTAGACTGATGCTCTTGCATGTAGAGCGAGAGAATGGAGTGAAAATGGAAAAGAGAAATATGCAACCAGATTTTAATATGCCCACTAAAAGGTTTAAACCACAAAACGTTCAAGGACAAACTATTGGAGGATGGAGCCTGTGACTTAGAAGTAGAGATAAGATCTGCAGAAGTAAATGCAAGTTACATCTTTATTCTTTACTGCATTTGAGTGCAAATGCCATTTTCTATTAGATTGTATGCCAATCTAGTGCATATAGGACTTCCAATAGAATGAAGAGTGATAAGCATGGAAGAGATGTAGAGATTGTCATCATGCTTATGGAAAAGACAAGTGTGCATGTGTGTCTTACCCTGATTTAGTCTACAGAAAACTGAGTTGTAGAAGCTACAGAAGACACTTGGTAGTTTTTGCAGTTTAACTAAGATGAAAGTAAAAGGAATTTTTATATTGGTTAGGATCACAATATTTTTCTTAGTCTTATATGGTTTCTCAGCGCGTTCACCACTAACACGGCTAAGTCGGTTTTCACCGGATCACCAAAACCGCATGCCACATCTTGGTGTGAAAACAAGTGTGTGTGGTGGGTGGGTGGGATTTCAAGACAATGCTGGGGGAGCTATATCCTAACGTCATTGGTATATCAAGGGTCATGCCTTTGAAGATTAGAAGCTGACTGTAGTGCTGGAAATTCCACTAAATCTGAAGCAGATCTCAGAAACTATTCCCTTTTGCATAGTTGTACTATTTGGTTGGAGAGGAACAATTCTTGTTTGAAGGAAAAAAGAGACTTCTTTCTAGAATTAATAATTATTGTCCACAGAATTTATATTTTTGGTGTCACTGCAGTATTGACTTTGAGTCTGTTAGGACCAAGGAGGAGTCACTTGATAATCTATTGTAATGGTATGTTGTTGAGTCATTTACTGCTCTGTACCTTCTTGGTACTTTATAAATAGAACTTGACCTTATCATAAAAAGAAAAAGCGACCACATTTTCATCCCTTGCATAGGTTCTATAGGTTGCCTTCTGTGGGAATTTCATTCCTTGATTCTTGGTAGCCGGATATTTAGTTAATTAGTTTCACTCCACTGGATCCTTTTCTTCAGTCAATCATAGATTGGTTTCTTTGGTAAATCTTGATTGATTTGTACCAGATCTTCATTAACGTATAGTTGACCGGATCATCATTAGCGTATTGCTGTGCATTCAAAACTTCACCATATTAGTGGCATACCCCTTTCAAGGAAAAGATCGTTGTCATCATTAAAATCCTCCCGATACTCGGGGTAGTAATGACTGAAACATGATTTACTTACTATGGTAGGACTCACTGGATAAGCTCAATGGCTGAGCTAGGGCCTAGCTTAATGGGATGAAGAGATGCTTTAACAGAAGACGCAAGACTTAGTCAACTTAATCAACTGCTGGGTATGGTGCTTTCATGTGTCTATCTTACCCTTAAAACAGCCATAATAAGCCTTTTTGATGTTATCTTTTTCTCCTGGAATTTGAGGACTCTCTAGAAATTCATGGCTTCTCCTTATGTGCCATTTCAATTAATCAAGTTTCTTACCAGCATATAGATGCCCCCTCTAGACAACCGTAGTGAAGAGCACAGTTGCCGAGAAAGGTGTTATATTTGTTAACTGTAATTCATTCAGATAATCATTACCCTTTACTGCATAAAGGTGGACATGTATCTCTCTACCTGTGAAGTTTCTATTACGAGTAATAATTGAAAAATATGAACTCATGGTGTATGATTCCACTTTTTATATTGCAGGGAACCTATGAAAAAGGGACAAATGCTGATATTGAAGAGTTTATCTATCAGTTGTTAGATGTCTTTGATGATGGCGTTGTTGGAAGGTAGAACAATAAGCTTCAATATGTTTAAGGCTATGTACAGTTTGGTCCCTCTAGATTTAGTTTTTCATATGTAACTATGCTCGACTTCCAAAATGTGTCAATTATCACTCTTGATCCATGGGGTAAAGTTAAAAAGTCCAAACTAACTTTTTAGTGGAATCGGCAATATCACCAGCTCAAACTTTTTACCTAGAGAACAACTGGAAGAGGTTCTTACTGTAGGTAGGTTGAAGTCATAGAGGGTTGTCGGTCATTTTGATTCGTGAGGGCATCACGTTTTGGGTAAAAGGGTGGACTAGCTATTTGAAGATTTATGTGCTAAATTTCAGTTAGTTTAGTGAGAAGGCTCTCCTAAAAGTACTAGCCAAGGGGGTACACTTGCCATAAGTTGACTTTAAAAAATCTACTCTTTCACTTTCCCCATTGATTCTGCTCCCCCCTGAAAGATGCTGTAATGTGAAGGACATTAGAAAAAAAAAACTTTAAAGTGAAGGATTATTAGAAAAAAATACTGTAAGGTGAAGGGAAGTTACACATTATGTGAAAATCGAGGGGAGTTTTGTTTTACAAGTCTGCAATTAGAGGAAGTAAATTGTAATTACACTATTTTTAATTCAATTAAATGCTTTATCTTTATCCTCCCAAATTAAATTTTAACCCTTTTTCACAGAAAAGCAACTGCTTGGTACAGCTGAGATAGTTTGTGCTCTGTTTTTGCACAGTTGAGGCAGTTATTTTTCCTTCCACACTAGGAGAACCAGGGATAACTTAAACATTCGTTTTATCTTGACCTTGTTTATATTGAACTGACTTGTGAGATTCTCACTTTGGACTTATCTCTTTGTTTTTATTTATTTTAATATTTTTCATTCAAGATACAATTGAGGTATTCTAGTCTTAACACTGACTTGAAAGCTGCTTAGACATCTCAGATTCTTTAGGTCTAGGATACTTTTTTTCATAACTAAGAATCCCTGATGTCTAGTAGTACACGGTTTAAAACTTGGTGGATGATGGTCCACTATACCCTTCTCCACTTAAATTTCCAGCTTTTATAAATGGCAAATGATAATATTTGAAACCACGATGTGTGCCTAAATAACATATTATTTGTTGCGCTTTTACTACGAGTAGACCAATGCCCAGGGGGGCATCTCTTGGACTACTTTAAAATGATAATGATGAGAAGATGATCATTATCAAGATGCTAATGTTATGGAGAGGACGGATCTTAGTAAAAGAATGATCATAATTCCTAGATACGCTCTCAATGAAGACCAGTCAAATGTTAATATAACTGTCAAGCGAAATGGATATCTCGAAAAAGGTTGTGATGCAAGCTTCTGAAAAAATAGGGATTTAAGGCATGTATATTCATTATTAAAAGCTTATATGAAGTTGGTAGAGATTGTTATTGTCACTATCATATGTATGAGTGTGACATTTTTCACAAAAATCGATGTGTCTTTGCCCCCTCATCTTATGATATTCACAACTTCTTTTTTCGTCCTTTACCCTCTCTAATCGAGTGATGGTATAATGATAAATCCAGTTCCCTCAGGCTGTCTTTCTCCGAGGGGATGTTTGCTTCTCTTGGTTTATGCAAAGTTCTCCATGATCAACAGCTTATTAGACTTTCCAAAATTGTTTCTTCTAGTCATCCTTGGGCATCCTGTTCCTTTTCCTGCAGTCATCTTAGTATTATCACTCTTTTCAATAGGTGCATAGTAGACCTTATTGTCTATAGCCTCATCACTCGCCCTGGGTTATTCCTCTTCCGTTAAGCTTTACAATAATTGATCTTCCCAACCCCTTTCCTTGGCTTTCTTCCTCAGGTGGGCTCTCCCTAAGAAGTACAACTAAGCGGGGCTTGCAAACTTTTAACTATTTTTCCATCCTTGCAAGCACTCGATACAAATTTAACCATCAGATTAGTTGGAGAGTCAAGTGATGTTTGTTGCCTTTGAAAGTGCTACATTTCCTCTCTAATAATAAGGTAAAATACTTACAAGAAGGGAGAAAGCCTGGAGCATTACGCTCCATGAAGAAAATGGTGTATTTAAGTTTAGAATGAGGCAACAATACTGCACCTACTTTTACTGGATAGGCATGTATGTTTGTCCACTGTACTCGAAACATCTGGATTGGGCCTCTTTTGTTAAATAATATCATTACTTTTTGAGGTGGAAGTGATATAGAATTTTATTTCTGAGAATGGATCTCCATTGAGAAAAAACAAGAGGAAGAAGGAGGAGGTTCCAGCTTTATTATTCAAGATAGGTAACATAATCACGTCACACTGATTGATAAACATTAAGTAATATGTACATACACTTTTTGAATAAAATGCGATTGACCATGCCTTTGGGGTGTCTTTTGTGGTCTATTTCAGCAAAATAATATTCTGTAACTGAAGTGAAATGAGTTCTTCCCATGAACTAGAAGCTGTCCTTTTTTTTTTTTTTTTTTTTTTTTGTGAAAAACCTAGAAATCATCCTTGTAAGCTGATATGGATGTACAGAGGATCCAACACTGGTTAGTCCATGATAATTGGAAAGAGCATATCATCTGGCATTAGATGACAGATTGTTTCCTGTATTTCAATTTTCAATAGTTGTTGTCAGATGAAAGGTTCATTTCTTCCAGAATCCCTTTTCTTTCTCTTTCTCTTTTTCCTTTTGCACTATGTGGAACATATATTTGTATAATGAGAAGCTTTATCTTCAGTTTATGAGCTTGACTGCCTAAACTTGGATGTCAAATAGATTCATTGAAGCTCTGGAAAAATAGCCCTAGCCTTGTTCGGTTTTAAACACAGAATTGTTCATAATGATTAAACATAGTTCTGGATCCAATATTAGATATCCATACTATTGATTACCAAAAAGAGAAATCAGTACTATTGTTTTCTCCTTTATGGTGGTAAATACATCAGTGAAATCAACTTGCAGATCAGATCTGGAAGCAGTCTTGACTGCAGTACTAAGAAATATATCTTCTCATG</genome_strand>
        <mrna_strand>ACGTTTACAGCTCGAAGAGAGAAGCAGAGTACTGTGAAGAAGCGAAAAGGGGGGAGAATTGGGATTTCTGAAGAGCACAAAATGGGAAACTCTCAGTCGAATTCAACGAATCCACGTTTTGATTTAGCCAAGAG..............................................................................................AGCTTTCACAGAGAGGAAATTGGAAGACTTGAAATCGTTGTTCGATTCACTAGCTGCACAATCACAGAGCAATGGAAAATACGTTTCTTCTTCTGTTTTCAAG...................................................................................GCATATATTGGAGTTGAAGGGCCATTGGGTGATAGAATGTTCGATTTGGTCACCCAGAAGCGTAAGGATCAAAAGCTTACATATGAGGACCTTGTGATTGCTCAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAACCTATGAAAAAGGGACAAATGCTGATATTGAAGAGTTTATCTATCAGTTGTTAGATGTCTTTGATGATGGCGTTGTTGGAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGATCTGGAAGCAGTCTTGACTGCAGTACTAAGAAATATATATTCTCATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E318368" ref_strand="+" ref_description="SGN-E318368 [cTOA-29-J11]">
      <seq>acagctcgaagagagaagcagagtactgtgaagaagcgaaaaggggggagaattgggatttcggaagagcagaaaatgggaaactctcagtcgaattcaacgaatccacgttttgatttagccaagagagctttcacagagaggaaattggaagacttgaaatcgttgttcgattcactagctgcacaatcacagagcaatggaaaatacgtttcttcttctgttttcaaggcatatattggagttgaagggccattgggtgatagaatgttcgatttggtcacccagaagcgtaaggatcaaaagcttacatatgaggaccttgtgattgctaaaggaacctatgaaaaagggacaaatgctgatattgaagagtttatctatcagttgttagatgtctttgatgatggcgttgttggaagatcagatctggaagcagtcttgactgcagtactaagaaatatatcttctcatgagagccatcaatctgaacctagtccggacagggaaattctcgacattttcctcaatgctgcaaatttgacaacggatgatacaaaatgcgctgaaagttgtatgtcttttgaggaatttaaaagttggtgtgcccgtcttccatcagtaaggaagtttctcggaactctggtgtctacacgtgattcaagctctngaggtcctatgctagtatacccagaagacattgatcctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0101H16.1" temp_strand="+" temp_description="C02SLe0101H16.1  AC215444.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0101H16 sequenced_by:kribb upload_account_name:korea">
        <position start="36852" stop="46323"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="37152" g_stop="37279" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="128" r_length="128" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="37280" i_stop="37373" i_length="94">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="37374" g_stop="37476" g_length="103"/>
          <reference_exon_boundary r_type="cDNA" r_start="129" r_stop="231" r_length="103" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="37477" i_stop="37559" i_length="83">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="37560" g_stop="37664" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="232" r_stop="336" r_length="105" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="37665" i_stop="41369" i_length="3705">
            <donor d_prob="0.860" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="41370" g_stop="41455" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="337" r_stop="422" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="41456" i_stop="44406" i_length="2951">
            <donor d_prob="0.914" d_score="1.00"/>
            <acceptor a_prob="0.968" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="44407" g_stop="44648" g_length="242"/>
          <reference_exon_boundary r_type="cDNA" r_start="423" r_stop="664" r_length="242" r_score="0.992"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="44649" i_stop="45978" i_length="1330">
            <donor d_prob="0.959" d_score="0.96"/>
            <acceptor a_prob="0.983" a_score="0.87"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="45979" g_stop="46023" g_length="45"/>
          <reference_exon_boundary r_type="cDNA" r_start="665" r_stop="709" r_length="45" r_score="0.867"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0101H16.1" gen_strand="+" ref_id="SGN-E318368" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>709</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0101H16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E318368" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="37152" e_stop="37279"/>
          <exon e_start="37374" e_stop="37476"/>
          <exon e_start="37560" e_stop="37664"/>
          <exon e_start="41370" e_stop="41455"/>
          <exon e_start="44407" e_stop="44648"/>
          <exon e_start="45979" e_stop="46023"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAGCTCGAAGAGAGAAGCAGAGTACTGTGAAGAAGCGAAAAGGGGGGAGAATTGGGATTTCGGAAGAGCAGAAAATGGGAAACTCTCAGTCGAATTCAACGAATCCACGTTTTGATTTAGCCAAGAGGCAATTTCTCTCTAACACTAAGCAATGATTACACAGTTGAATATTATCTGATTCAATTTTGAACTCAAACTGCATATGTTAATTCTTATTGTAGAGCTTTCACAGAGAGGAAATTGGAAGACTTGAAATCGTTGTTCGATTCACTAGCTGCACAATCACAGAGCAATGGAAAATACGTTTCTTCTTCTGTTTTCAAGGTACTTTTTGTCAATTTTTCTGTATTGTCTTGTTATTTTTTTTTTTACAATGAAATTGGGAATTGGGTGTTTGTGCACTATAGGCATATATTGGAGTTGAAGGGCCATTGGGTGATAGAATGTTCGATTTGGTCACCCAGAAGCGTAAGGATCAAAAGCTTACATATGAGGACCTTGTGATTGCTAAAGTAAGTGTTTTTGATCTCATTCCACTGGGTGTTGAACTAGTTACCCTAAAGTTTCCTCATTTGTTGACTTGATGGTATACAAAGGCCTTTTTTGATGGAAGAATTCACCCAAATATCCCCCATCTCAACCCCATAAACTTAAAATAGCTGGCAGTTGTATAATATATATATATATAATCCATGTATAATATGTACATAACCATGTGTAATCTATGTATAGCGACGAAGGATATTTGGGTGAAGATCCTTTTTTTTTATCCGTTTTCCTATTAGCTTTTGTAGTTATGTAACTTAAGATGAAATTTATATGTCCATCCATTGTATTGTATGTTGATGGATTATCTAAGTTTCACGCCAAGCTGGCTGAACACCATGTCTATAAAGAAAACCTGGTGCACTAAGCTCCTCTATTAACGGGTTCATGTGAAGGACCAAATGGTAGTAGGTTTGTTGTATCCCGACTTGCATTTATTCAAGAGGCTGTTTTTACGGCTTAAACCTATGGCCAATATCATAAAAGAACATTTTTCTACACCTATTCATGACCTTTTGGTACGAGCTCAAGTGTATCATATGATCCACCTTCATTATTGTTATATCTTACAGTTGTCGTAATAATAGGACAAACGATTTCCATACTCTGCCCTTCACTCTATAAGAATAACAACATCATGAACATTATTGAATAGTTACAACCTCGATATACAAGGAACTAGATAGATGTTATTACATTTTATTTGAAAAAGAAGTACATCTACAATATGAAAACTACATATGAGTTTTCTATATATGCTCGCAGAAAACATCTAGTTCACAGTAAGGTTGAAAAAAGCGGGTTGTGTTAACCCAGATAGGTTCAGGATTAGGGGAAAGAAATAACCGATTGTGATGAAGCCTTATCCTCATGGTTTTCTATACTTAGCATGATATGGCTACTGGGTTTGGCATTAAATAGGCTAGAGCTTCCATTCTATTGCCTCCTGGTATTGAGGAGTATAACAAGGATTCTCACATCATGCGCGGGTGTGGGTAAAGAAATTAGTTCCACCAAAACAATATGTGGATGTGATGGTAGATGAGAAAGGATTCCCCATTGTAGTGGATATATAGAGTAATGGCAAAGGATTCCCCATTGTAGTGGATATATAGAGTAATATGTTTGTCAAAGATAGTCTATTTCGAATAGGTAGTTGGAACATAGGTTGATTTATAGGGAAGTCAAAGAATCTTTTCTGATAGGTATGAAGAATTAAATGAAATCAATGTCTAGCTGAAACAGGACTATAGGAGAACAACTATGTTGTATGTCTACAAAGAGACTTGGTGTAAAGGAGACAAGGTTAAAGAGATGAACAAAACAAGCTATAATTTGTGGTGTTTTGGTTTGTGAGAGATCCAAGTAGGCACGGGTTAGAAATCATGTAGAACCAGGACATAAATATAAAGTTGCAGAAGTTAAAAACATGTTGATAGGATTATCTTAGTGTGGGAAAGAAAACAAAAAGTACCGTTAGTGCATAGGCTTCACAAATAGAATTAGATGAGGAAGCAGAAACTAAATTTTAAAAATATAGATCTCCATTGGTACAAGGGGGTTCTAGGTGACCAACAAACGTTTGTACAAGGAGATTTGAATGGATATGGGGTTAGATATGTGACACTTAAACTGAGTACATAACAAATATTGTGGTACAATCAATGGAGAAGGGAATGTTTTAAAGTTTGCATTAGCTTCTTATCTCTATTTTTAGGCTTTCAACTAAGACCTACTTTGAAGAAAGAGAACAACATTTGATGGTAATTAAGAGAGAAAGCAGCAATAACCAAATAAACTTCATTCTTACTAAAGGAAGTGACAATTCCACATTTAAGGACAGCAATGTTATACCATGAGAAGACCCAGTCCTAACCATCCAAAGTAGACTGATGCTCTTGCATGTAGAGCGAGAGAATGGAGTGAAAATGGAAAAGAGAAATATGCAACCAGATTTTAATATGCCCACTAAAAGGTTTAAACCACAAAACGTTCAAGGACAAACTATTGGAGGATGGAGCCTGTGACTTAGAAGTAGAGATAAGATCTGCAGAAGTAAATGCAAGTTACATCTTTATTCTTTACTGCATTTGAGTGCAAATGCCATTTTCTATTAGATTGTATGCCAATCTAGTGCATATAGGACTTCCAATAGAATGAAGAGTGATAAGCATGGAAGAGATGTAGAGATTGTCATCATGCTTATGGAAAAGACAAGTGTGCATGTGTGTCTTACCCTGATTTAGTCTACAGAAAACTGAGTTGTAGAAGCTACAGAAGACACTTGGTAGTTTTTGCAGTTTAACTAAGATGAAAGTAAAAGGAATTTTTATATTGGTTAGGATCACAATATTTTTCTTAGTCTTATATGGTTTCTCAGCGCGTTCACCACTAACACGGCTAAGTCGGTTTTCACCGGATCACCAAAACCGCATGCCACATCTTGGTGTGAAAACAAGTGTGTGTGGTGGGTGGGTGGGATTTCAAGACAATGCTGGGGGAGCTATATCCTAACGTCATTGGTATATCAAGGGTCATGCCTTTGAAGATTAGAAGCTGACTGTAGTGCTGGAAATTCCACTAAATCTGAAGCAGATCTCAGAAACTATTCCCTTTTGCATAGTTGTACTATTTGGTTGGAGAGGAACAATTCTTGTTTGAAGGAAAAAAGAGACTTCTTTCTAGAATTAATAATTATTGTCCACAGAATTTATATTTTTGGTGTCACTGCAGTATTGACTTTGAGTCTGTTAGGACCAAGGAGGAGTCACTTGATAATCTATTGTAATGGTATGTTGTTGAGTCATTTACTGCTCTGTACCTTCTTGGTACTTTATAAATAGAACTTGACCTTATCATAAAAAGAAAAAGCGACCACATTTTCATCCCTTGCATAGGTTCTATAGGTTGCCTTCTGTGGGAATTTCATTCCTTGATTCTTGGTAGCCGGATATTTAGTTAATTAGTTTCACTCCACTGGATCCTTTTCTTCAGTCAATCATAGATTGGTTTCTTTGGTAAATCTTGATTGATTTGTACCAGATCTTCATTAACGTATAGTTGACCGGATCATCATTAGCGTATTGCTGTGCATTCAAAACTTCACCATATTAGTGGCATACCCCTTTCAAGGAAAAGATCGTTGTCATCATTAAAATCCTCCCGATACTCGGGGTAGTAATGACTGAAACATGATTTACTTACTATGGTAGGACTCACTGGATAAGCTCAATGGCTGAGCTAGGGCCTAGCTTAATGGGATGAAGAGATGCTTTAACAGAAGACGCAAGACTTAGTCAACTTAATCAACTGCTGGGTATGGTGCTTTCATGTGTCTATCTTACCCTTAAAACAGCCATAATAAGCCTTTTTGATGTTATCTTTTTCTCCTGGAATTTGAGGACTCTCTAGAAATTCATGGCTTCTCCTTATGTGCCATTTCAATTAATCAAGTTTCTTACCAGCATATAGATGCCCCCTCTAGACAACCGTAGTGAAGAGCACAGTTGCCGAGAAAGGTGTTATATTTGTTAACTGTAATTCATTCAGATAATCATTACCCTTTACTGCATAAAGGTGGACATGTATCTCTCTACCTGTGAAGTTTCTATTACGAGTAATAATTGAAAAATATGAACTCATGGTGTATGATTCCACTTTTTATATTGCAGGGAACCTATGAAAAAGGGACAAATGCTGATATTGAAGAGTTTATCTATCAGTTGTTAGATGTCTTTGATGATGGCGTTGTTGGAAGGTAGAACAATAAGCTTCAATATGTTTAAGGCTATGTACAGTTTGGTCCCTCTAGATTTAGTTTTTCATATGTAACTATGCTCGACTTCCAAAATGTGTCAATTATCACTCTTGATCCATGGGGTAAAGTTAAAAAGTCCAAACTAACTTTTTAGTGGAATCGGCAATATCACCAGCTCAAACTTTTTACCTAGAGAACAACTGGAAGAGGTTCTTACTGTAGGTAGGTTGAAGTCATAGAGGGTTGTCGGTCATTTTGATTCGTGAGGGCATCACGTTTTGGGTAAAAGGGTGGACTAGCTATTTGAAGATTTATGTGCTAAATTTCAGTTAGTTTAGTGAGAAGGCTCTCCTAAAAGTACTAGCCAAGGGGGTACACTTGCCATAAGTTGACTTTAAAAAATCTACTCTTTCACTTTCCCCATTGATTCTGCTCCCCCCTGAAAGATGCTGTAATGTGAAGGACATTAGAAAAAAAAAACTTTAAAGTGAAGGATTATTAGAAAAAAATACTGTAAGGTGAAGGGAAGTTACACATTATGTGAAAATCGAGGGGAGTTTTGTTTTACAAGTCTGCAATTAGAGGAAGTAAATTGTAATTACACTATTTTTAATTCAATTAAATGCTTTATCTTTATCCTCCCAAATTAAATTTTAACCCTTTTTCACAGAAAAGCAACTGCTTGGTACAGCTGAGATAGTTTGTGCTCTGTTTTTGCACAGTTGAGGCAGTTATTTTTCCTTCCACACTAGGAGAACCAGGGATAACTTAAACATTCGTTTTATCTTGACCTTGTTTATATTGAACTGACTTGTGAGATTCTCACTTTGGACTTATCTCTTTGTTTTTATTTATTTTAATATTTTTCATTCAAGATACAATTGAGGTATTCTAGTCTTAACACTGACTTGAAAGCTGCTTAGACATCTCAGATTCTTTAGGTCTAGGATACTTTTTTTCATAACTAAGAATCCCTGATGTCTAGTAGTACACGGTTTAAAACTTGGTGGATGATGGTCCACTATACCCTTCTCCACTTAAATTTCCAGCTTTTATAAATGGCAAATGATAATATTTGAAACCACGATGTGTGCCTAAATAACATATTATTTGTTGCGCTTTTACTACGAGTAGACCAATGCCCAGGGGGGCATCTCTTGGACTACTTTAAAATGATAATGATGAGAAGATGATCATTATCAAGATGCTAATGTTATGGAGAGGACGGATCTTAGTAAAAGAATGATCATAATTCCTAGATACGCTCTCAATGAAGACCAGTCAAATGTTAATATAACTGTCAAGCGAAATGGATATCTCGAAAAAGGTTGTGATGCAAGCTTCTGAAAAAATAGGGATTTAAGGCATGTATATTCATTATTAAAAGCTTATATGAAGTTGGTAGAGATTGTTATTGTCACTATCATATGTATGAGTGTGACATTTTTCACAAAAATCGATGTGTCTTTGCCCCCTCATCTTATGATATTCACAACTTCTTTTTTCGTCCTTTACCCTCTCTAATCGAGTGATGGTATAATGATAAATCCAGTTCCCTCAGGCTGTCTTTCTCCGAGGGGATGTTTGCTTCTCTTGGTTTATGCAAAGTTCTCCATGATCAACAGCTTATTAGACTTTCCAAAATTGTTTCTTCTAGTCATCCTTGGGCATCCTGTTCCTTTTCCTGCAGTCATCTTAGTATTATCACTCTTTTCAATAGGTGCATAGTAGACCTTATTGTCTATAGCCTCATCACTCGCCCTGGGTTATTCCTCTTCCGTTAAGCTTTACAATAATTGATCTTCCCAACCCCTTTCCTTGGCTTTCTTCCTCAGGTGGGCTCTCCCTAAGAAGTACAACTAAGCGGGGCTTGCAAACTTTTAACTATTTTTCCATCCTTGCAAGCACTCGATACAAATTTAACCATCAGATTAGTTGGAGAGTCAAGTGATGTTTGTTGCCTTTGAAAGTGCTACATTTCCTCTCTAATAATAAGGTAAAATACTTACAAGAAGGGAGAAAGCCTGGAGCATTACGCTCCATGAAGAAAATGGTGTATTTAAGTTTAGAATGAGGCAACAATACTGCACCTACTTTTACTGGATAGGCATGTATGTTTGTCCACTGTACTCGAAACATCTGGATTGGGCCTCTTTTGTTAAATAATATCATTACTTTTTGAGGTGGAAGTGATATAGAATTTTATTTCTGAGAATGGATCTCCATTGAGAAAAAACAAGAGGAAGAAGGAGGAGGTTCCAGCTTTATTATTCAAGATAGGTAACATAATCACGTCACACTGATTGATAAACATTAAGTAATATGTACATACACTTTTTGAATAAAATGCGATTGACCATGCCTTTGGGGTGTCTTTTGTGGTCTATTTCAGCAAAATAATATTCTGTAACTGAAGTGAAATGAGTTCTTCCCATGAACTAGAAGCTGTCCTTTTTTTTTTTTTTTTTTTTTTTTGTGAAAAACCTAGAAATCATCCTTGTAAGCTGATATGGATGTACAGAGGATCCAACACTGGTTAGTCCATGATAATTGGAAAGAGCATATCATCTGGCATTAGATGACAGATTGTTTCCTGTATTTCAATTTTCAATAGTTGTTGTCAGATGAAAGGTTCATTTCTTCCAGAATCCCTTTTCTTTCTCTTTCTCTTTTTCCTTTTGCACTATGTGGAACATATATTTGTATAATGAGAAGCTTTATCTTCAGTTTATGAGCTTGACTGCCTAAACTTGGATGTCAAATAGATTCATTGAAGCTCTGGAAAAATAGCCCTAGCCTTGTTCGGTTTTAAACACAGAATTGTTCATAATGATTAAACATAGTTCTGGATCCAATATTAGATATCCATACTATTGATTACCAAAAAGAGAAATCAGTACTATTGTTTTCTCCTTTATGGTGGTAAATACATCAGTGAAATCAACTTGCAGATCAGATCTGGAAGCAGTCTTGACTGCAGTACTAAGAAATATATCTTCTCATGAGAGCCATCAATCTGAACCTAGTCCGGACAGGGAAATTCTCGACATTTTCCTCAATGCTGCAAATTTGACAACGGATGATACAAAATGCGCTGAAAGTTGTATGTCTTTTGAGGAATTTAAAAGTTGGTGTGCCCGTCTTCCATCAGTAAGGAAGTTTCTCGGAACTCTGTTGTCTACACGTGATTCAGGTTTCTGCTTTACAGTTCATCTTGTGTTTTCTATTTCTGTATTTCCACTTTTTTTCCTTGTCATTTGTAGTTTCTCTTAGAGGAATATCTTTTCTACATATTGGACATTGCTTACTGGGTGAATTTCTGTTGGGCTTAAATGTTAGCTTTTCTAACATTACTTCTATATTTGCTGAAACTTCTATGACAACTATGCATAATACTAGCTTTTCCATGTAATAGACATTTTACTTGTGTTCTCTTTGAAACTTAAATGTTATCATACATATGCCGGAGTTGTTAATTATACTGTTGTAGTTGCTGTTATGGGGATTCTCATAACCAGTAGCGTGCAAATGATTTTAAGTAAGCGGTGTCAACAATAAAATACGAGAACAAACGAGAATTCATTGTGATGATATCATATTGAAAAGGCAATCTAGATTTTAGTACTAAACATAATTTAAGCATATTGCCCAGTGGCATATCTAGGTGTGCGCCACGCTCAAAGTGTGATATGGTGCAACGGTTATTGGGTATACCTCTCTAAGTGAGGCCGGGGTTCAAAATCTATGTCTATCTTGTTATTTTTTTACTTCTTTCCCCATGCCTTTTGCATTTTAATTAAATTTTTTTTTTCTATCTGTGTTTAGTTTATTCTTCCAAAATTTCCAAGAATTCCTGTTCTCATTTTGTCGTCATAAAAATATATATTATTAAACCAAATATGTAAATTAAAATTAGTAGCAGTGAAGGATATAGCATATAGCCAGTGAGTTCAACTGATTCAAGACAAAATATCAGTACATATGTAACTATATAAAAATAATTAACTTTGAACATAAAATTCCAAAAGCATAATGGATCCAATGGTAAGAACTTAAAGGTTGAAACTCGTCAAAAATAACCTCATCGTAATAGTGCACCCATATTTTCGAATTCATGGATCTTCCTTCTGCATATTGCTAGAAGTCTTTTCGACGAGTTTTCATTCTTTAATTTGTATAATGATAACCTCATCAGAGATGCTTTAAACTAAGTCCTTTTTCATTTTGAGACACCAAAAGGAGGTGTAGCATAGTAATTTAGTTGATTGTTAGTGTATGACGATTTGGCTTCAATTCTTTGTAACCATGACTTTACTTATAACAACTCTAGAATATTGTCAGTTATGCACATTTAAGTTTGTGCAAAGAAATCTTTTTTTTAAAAAAATAATATTCATTCCACTTCTCCACCTCCAAAAATGAAAAAAAAACCCCAAAAAATGGTGAATTATTTCCCCAATTGCAAAACAGTGGTCAAGCTAGGGTGTAAACAGGGTTTACTAATCTATTAGTATTTTTTGCAGGCTCTGAGGTTCCTATGCTAGTATACCCAGAGAACATTGATCCTG</genome_strand>
        <mrna_strand>ACAGCTCGAAGAGAGAAGCAGAGTACTGTGAAGAAGCGAAAAGGGGGGAGAATTGGGATTTCGGAAGAGCAGAAAATGGGAAACTCTCAGTCGAATTCAACGAATCCACGTTTTGATTTAGCCAAGAG..............................................................................................AGCTTTCACAGAGAGGAAATTGGAAGACTTGAAATCGTTGTTCGATTCACTAGCTGCACAATCACAGAGCAATGGAAAATACGTTTCTTCTTCTGTTTTCAAG...................................................................................GCATATATTGGAGTTGAAGGGCCATTGGGTGATAGAATGTTCGATTTGGTCACCCAGAAGCGTAAGGATCAAAAGCTTACATATGAGGACCTTGTGATTGCTAAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAACCTATGAAAAAGGGACAAATGCTGATATTGAAGAGTTTATCTATCAGTTGTTAGATGTCTTTGATGATGGCGTTGTTGGAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGATCTGGAAGCAGTCTTGACTGCAGTACTAAGAAATATATCTTCTCATGAGAGCCATCAATCTGAACCTAGTCCGGACAGGGAAATTCTCGACATTTTCCTCAATGCTGCAAATTTGACAACGGATGATACAAAATGCGCTGAAAGTTGTATGTCTTTTGAGGAATTTAAAAGTTGGTGTGCCCGTCTTCCATCAGTAAGGAAGTTTCTCGGAACTCTGGTGTCTACACGTGATTCAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTNGAGGTCCTATGCTAGTATACCCAGAAGACATTGATCCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E745552" ref_strand="+" ref_description="SGN-E745552 [GI|47105902]">
      <seq>gagagtactgtgaagaagcgaaaaggggggagaattgggatttcggaagagcagaaaatgggaaactctcagtcgaattcaacgaatccacgttttgatttagccaagagagctttcacagagaggaaattggaagacttgaaatcgttgttcgattcactagctgcacaatcacagagcaatggaaaatacgtttcttcttctgttttcaaggcatatattggagttgaagggccattgggtgatagaatgttcgatttggtcacccagaagcgtaaggatcaaaagcttacatatgaggaccttgtgattgctaaaggaacctatgaaaaagggacaaatgctgatattgaagagtttatctatcagttgttagatgtctttgatgatggcgttgttggaagatcagatctggaagcagtcttgactgcagtactaagaaatatatcttctcatgagagccatcaatctgaacctagtccggacagggaaattctcgacattttcctcaatgctgcaaatttgacaacggatgatacaaaatgcgctgaaagttgtatgtcttttgaggaatttaaaagttggtgtgcccgtcttccatcagtaaggaagtttctcggaactctgttgtctacacgtgattcaggctctgaggttcctatgctagtatacccagagaacattgatcctgctgtaatattgttaagaaaggaatatgcttggcatataggtggggccctcccacaagacgagctgcatgaatggagacttttgtatcacagtacagtacatggcctaagtttcagtactttcctggggaacatttcaaatgacaaaggaccaactttattggtaattaaagacaaagaaggctatatttacggaggttatgcatctcagccatgggagaagcatgctgacttttatggggatatgaagtctttcctcttccagctatacccaaaggcatcggtttaccgtcctactggagcgaactctaatttacagtggtgtgctatacattttagttctgagagcatccccaatggcattggttttggaggacgagcacaccacttcggcttgttcatctcagctaactttgacctggggcatactttcacctgcacgacctttggcagtcctagcttgtcaaagacccaccaaatctatccagaagtgatagaatgctggggagttgcgataaaaagagctcaagataatcaggatagacttcaaggtaccgtgttagaaagatttaaagaggatcgccatatgcttaacatggttggacttgcaaattcaagtgagtgatgtgccctctgtactttcttcttgtgctgaattagcacagtttctagagtttattgtcttgcgtgtagtttaataatgtgttgtgttactacaatataagtgagtgcaaaatcactagatgctcaaccccgtgtatgcgtcgatagcatctagagtgtaatttaaggttttgcaatcattactatccctggagtcttggcaaatttcttcatgccattctcctaatcattgttaatagtaattgtcattttgatgcaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0101H16.1" temp_strand="+" temp_description="C02SLe0101H16.1  AC215444.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0101H16 sequenced_by:kribb upload_account_name:korea">
        <position start="36871" stop="49114"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="37170" g_stop="37279" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="110" r_length="110" r_score="0.991"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="37280" i_stop="37373" i_length="94">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="37374" g_stop="37476" g_length="103"/>
          <reference_exon_boundary r_type="cDNA" r_start="111" r_stop="213" r_length="103" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="37477" i_stop="37559" i_length="83">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="37560" g_stop="37664" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="214" r_stop="318" r_length="105" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="37665" i_stop="41369" i_length="3705">
            <donor d_prob="0.860" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="41370" g_stop="41455" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="319" r_stop="404" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="41456" i_stop="44406" i_length="2951">
            <donor d_prob="0.914" d_score="1.00"/>
            <acceptor a_prob="0.968" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="44407" g_stop="44648" g_length="242"/>
          <reference_exon_boundary r_type="cDNA" r_start="405" r_stop="646" r_length="242" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="44649" i_stop="45978" i_length="1330">
            <donor d_prob="0.959" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="45979" g_stop="46159" g_length="181"/>
          <reference_exon_boundary r_type="cDNA" r_start="647" r_stop="827" r_length="181" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="46160" i_stop="47594" i_length="1435">
            <donor d_prob="0.583" d_score="1.00"/>
            <acceptor a_prob="0.680" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="47595" g_stop="47778" g_length="184"/>
          <reference_exon_boundary r_type="cDNA" r_start="828" r_stop="1011" r_length="184" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="47779" i_stop="48254" i_length="476">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.932" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="48255" g_stop="48811" g_length="557"/>
          <reference_exon_boundary r_type="cDNA" r_start="1012" r_stop="1568" r_length="557" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="1571" polyA_stop="1587"/>
      <MATCH_line gen_id="C02SLe0101H16.1" gen_strand="+" ref_id="SGN-E745552" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>1568</cumulative_length_of_scored_exons>
        <coverage percentage="0.988" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0101H16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E745552" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="37170" e_stop="37279"/>
          <exon e_start="37374" e_stop="37476"/>
          <exon e_start="37560" e_stop="37664"/>
          <exon e_start="41370" e_stop="41455"/>
          <exon e_start="44407" e_stop="44648"/>
          <exon e_start="45979" e_stop="46159"/>
          <exon e_start="47595" e_stop="47778"/>
          <exon e_start="48255" e_stop="48811"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGAGTACTGTGAAGAAGCGAAAAGGGGGGAGAATTGGGATTTCGGAAGAGCAGAAAATGGGAAACTCTCAGTCGAATTCAACGAATCCACGTTTTGATTTAGCCAAGAGGCAATTTCTCTCTAACACTAAGCAATGATTACACAGTTGAATATTATCTGATTCAATTTTGAACTCAAACTGCATATGTTAATTCTTATTGTAGAGCTTTCACAGAGAGGAAATTGGAAGACTTGAAATCGTTGTTCGATTCACTAGCTGCACAATCACAGAGCAATGGAAAATACGTTTCTTCTTCTGTTTTCAAGGTACTTTTTGTCAATTTTTCTGTATTGTCTTGTTATTTTTTTTTTTACAATGAAATTGGGAATTGGGTGTTTGTGCACTATAGGCATATATTGGAGTTGAAGGGCCATTGGGTGATAGAATGTTCGATTTGGTCACCCAGAAGCGTAAGGATCAAAAGCTTACATATGAGGACCTTGTGATTGCTAAAGTAAGTGTTTTTGATCTCATTCCACTGGGTGTTGAACTAGTTACCCTAAAGTTTCCTCATTTGTTGACTTGATGGTATACAAAGGCCTTTTTTGATGGAAGAATTCACCCAAATATCCCCCATCTCAACCCCATAAACTTAAAATAGCTGGCAGTTGTATAATATATATATATATAATCCATGTATAATATGTACATAACCATGTGTAATCTATGTATAGCGACGAAGGATATTTGGGTGAAGATCCTTTTTTTTTATCCGTTTTCCTATTAGCTTTTGTAGTTATGTAACTTAAGATGAAATTTATATGTCCATCCATTGTATTGTATGTTGATGGATTATCTAAGTTTCACGCCAAGCTGGCTGAACACCATGTCTATAAAGAAAACCTGGTGCACTAAGCTCCTCTATTAACGGGTTCATGTGAAGGACCAAATGGTAGTAGGTTTGTTGTATCCCGACTTGCATTTATTCAAGAGGCTGTTTTTACGGCTTAAACCTATGGCCAATATCATAAAAGAACATTTTTCTACACCTATTCATGACCTTTTGGTACGAGCTCAAGTGTATCATATGATCCACCTTCATTATTGTTATATCTTACAGTTGTCGTAATAATAGGACAAACGATTTCCATACTCTGCCCTTCACTCTATAAGAATAACAACATCATGAACATTATTGAATAGTTACAACCTCGATATACAAGGAACTAGATAGATGTTATTACATTTTATTTGAAAAAGAAGTACATCTACAATATGAAAACTACATATGAGTTTTCTATATATGCTCGCAGAAAACATCTAGTTCACAGTAAGGTTGAAAAAAGCGGGTTGTGTTAACCCAGATAGGTTCAGGATTAGGGGAAAGAAATAACCGATTGTGATGAAGCCTTATCCTCATGGTTTTCTATACTTAGCATGATATGGCTACTGGGTTTGGCATTAAATAGGCTAGAGCTTCCATTCTATTGCCTCCTGGTATTGAGGAGTATAACAAGGATTCTCACATCATGCGCGGGTGTGGGTAAAGAAATTAGTTCCACCAAAACAATATGTGGATGTGATGGTAGATGAGAAAGGATTCCCCATTGTAGTGGATATATAGAGTAATGGCAAAGGATTCCCCATTGTAGTGGATATATAGAGTAATATGTTTGTCAAAGATAGTCTATTTCGAATAGGTAGTTGGAACATAGGTTGATTTATAGGGAAGTCAAAGAATCTTTTCTGATAGGTATGAAGAATTAAATGAAATCAATGTCTAGCTGAAACAGGACTATAGGAGAACAACTATGTTGTATGTCTACAAAGAGACTTGGTGTAAAGGAGACAAGGTTAAAGAGATGAACAAAACAAGCTATAATTTGTGGTGTTTTGGTTTGTGAGAGATCCAAGTAGGCACGGGTTAGAAATCATGTAGAACCAGGACATAAATATAAAGTTGCAGAAGTTAAAAACATGTTGATAGGATTATCTTAGTGTGGGAAAGAAAACAAAAAGTACCGTTAGTGCATAGGCTTCACAAATAGAATTAGATGAGGAAGCAGAAACTAAATTTTAAAAATATAGATCTCCATTGGTACAAGGGGGTTCTAGGTGACCAACAAACGTTTGTACAAGGAGATTTGAATGGATATGGGGTTAGATATGTGACACTTAAACTGAGTACATAACAAATATTGTGGTACAATCAATGGAGAAGGGAATGTTTTAAAGTTTGCATTAGCTTCTTATCTCTATTTTTAGGCTTTCAACTAAGACCTACTTTGAAGAAAGAGAACAACATTTGATGGTAATTAAGAGAGAAAGCAGCAATAACCAAATAAACTTCATTCTTACTAAAGGAAGTGACAATTCCACATTTAAGGACAGCAATGTTATACCATGAGAAGACCCAGTCCTAACCATCCAAAGTAGACTGATGCTCTTGCATGTAGAGCGAGAGAATGGAGTGAAAATGGAAAAGAGAAATATGCAACCAGATTTTAATATGCCCACTAAAAGGTTTAAACCACAAAACGTTCAAGGACAAACTATTGGAGGATGGAGCCTGTGACTTAGAAGTAGAGATAAGATCTGCAGAAGTAAATGCAAGTTACATCTTTATTCTTTACTGCATTTGAGTGCAAATGCCATTTTCTATTAGATTGTATGCCAATCTAGTGCATATAGGACTTCCAATAGAATGAAGAGTGATAAGCATGGAAGAGATGTAGAGATTGTCATCATGCTTATGGAAAAGACAAGTGTGCATGTGTGTCTTACCCTGATTTAGTCTACAGAAAACTGAGTTGTAGAAGCTACAGAAGACACTTGGTAGTTTTTGCAGTTTAACTAAGATGAAAGTAAAAGGAATTTTTATATTGGTTAGGATCACAATATTTTTCTTAGTCTTATATGGTTTCTCAGCGCGTTCACCACTAACACGGCTAAGTCGGTTTTCACCGGATCACCAAAACCGCATGCCACATCTTGGTGTGAAAACAAGTGTGTGTGGTGGGTGGGTGGGATTTCAAGACAATGCTGGGGGAGCTATATCCTAACGTCATTGGTATATCAAGGGTCATGCCTTTGAAGATTAGAAGCTGACTGTAGTGCTGGAAATTCCACTAAATCTGAAGCAGATCTCAGAAACTATTCCCTTTTGCATAGTTGTACTATTTGGTTGGAGAGGAACAATTCTTGTTTGAAGGAAAAAAGAGACTTCTTTCTAGAATTAATAATTATTGTCCACAGAATTTATATTTTTGGTGTCACTGCAGTATTGACTTTGAGTCTGTTAGGACCAAGGAGGAGTCACTTGATAATCTATTGTAATGGTATGTTGTTGAGTCATTTACTGCTCTGTACCTTCTTGGTACTTTATAAATAGAACTTGACCTTATCATAAAAAGAAAAAGCGACCACATTTTCATCCCTTGCATAGGTTCTATAGGTTGCCTTCTGTGGGAATTTCATTCCTTGATTCTTGGTAGCCGGATATTTAGTTAATTAGTTTCACTCCACTGGATCCTTTTCTTCAGTCAATCATAGATTGGTTTCTTTGGTAAATCTTGATTGATTTGTACCAGATCTTCATTAACGTATAGTTGACCGGATCATCATTAGCGTATTGCTGTGCATTCAAAACTTCACCATATTAGTGGCATACCCCTTTCAAGGAAAAGATCGTTGTCATCATTAAAATCCTCCCGATACTCGGGGTAGTAATGACTGAAACATGATTTACTTACTATGGTAGGACTCACTGGATAAGCTCAATGGCTGAGCTAGGGCCTAGCTTAATGGGATGAAGAGATGCTTTAACAGAAGACGCAAGACTTAGTCAACTTAATCAACTGCTGGGTATGGTGCTTTCATGTGTCTATCTTACCCTTAAAACAGCCATAATAAGCCTTTTTGATGTTATCTTTTTCTCCTGGAATTTGAGGACTCTCTAGAAATTCATGGCTTCTCCTTATGTGCCATTTCAATTAATCAAGTTTCTTACCAGCATATAGATGCCCCCTCTAGACAACCGTAGTGAAGAGCACAGTTGCCGAGAAAGGTGTTATATTTGTTAACTGTAATTCATTCAGATAATCATTACCCTTTACTGCATAAAGGTGGACATGTATCTCTCTACCTGTGAAGTTTCTATTACGAGTAATAATTGAAAAATATGAACTCATGGTGTATGATTCCACTTTTTATATTGCAGGGAACCTATGAAAAAGGGACAAATGCTGATATTGAAGAGTTTATCTATCAGTTGTTAGATGTCTTTGATGATGGCGTTGTTGGAAGGTAGAACAATAAGCTTCAATATGTTTAAGGCTATGTACAGTTTGGTCCCTCTAGATTTAGTTTTTCATATGTAACTATGCTCGACTTCCAAAATGTGTCAATTATCACTCTTGATCCATGGGGTAAAGTTAAAAAGTCCAAACTAACTTTTTAGTGGAATCGGCAATATCACCAGCTCAAACTTTTTACCTAGAGAACAACTGGAAGAGGTTCTTACTGTAGGTAGGTTGAAGTCATAGAGGGTTGTCGGTCATTTTGATTCGTGAGGGCATCACGTTTTGGGTAAAAGGGTGGACTAGCTATTTGAAGATTTATGTGCTAAATTTCAGTTAGTTTAGTGAGAAGGCTCTCCTAAAAGTACTAGCCAAGGGGGTACACTTGCCATAAGTTGACTTTAAAAAATCTACTCTTTCACTTTCCCCATTGATTCTGCTCCCCCCTGAAAGATGCTGTAATGTGAAGGACATTAGAAAAAAAAAACTTTAAAGTGAAGGATTATTAGAAAAAAATACTGTAAGGTGAAGGGAAGTTACACATTATGTGAAAATCGAGGGGAGTTTTGTTTTACAAGTCTGCAATTAGAGGAAGTAAATTGTAATTACACTATTTTTAATTCAATTAAATGCTTTATCTTTATCCTCCCAAATTAAATTTTAACCCTTTTTCACAGAAAAGCAACTGCTTGGTACAGCTGAGATAGTTTGTGCTCTGTTTTTGCACAGTTGAGGCAGTTATTTTTCCTTCCACACTAGGAGAACCAGGGATAACTTAAACATTCGTTTTATCTTGACCTTGTTTATATTGAACTGACTTGTGAGATTCTCACTTTGGACTTATCTCTTTGTTTTTATTTATTTTAATATTTTTCATTCAAGATACAATTGAGGTATTCTAGTCTTAACACTGACTTGAAAGCTGCTTAGACATCTCAGATTCTTTAGGTCTAGGATACTTTTTTTCATAACTAAGAATCCCTGATGTCTAGTAGTACACGGTTTAAAACTTGGTGGATGATGGTCCACTATACCCTTCTCCACTTAAATTTCCAGCTTTTATAAATGGCAAATGATAATATTTGAAACCACGATGTGTGCCTAAATAACATATTATTTGTTGCGCTTTTACTACGAGTAGACCAATGCCCAGGGGGGCATCTCTTGGACTACTTTAAAATGATAATGATGAGAAGATGATCATTATCAAGATGCTAATGTTATGGAGAGGACGGATCTTAGTAAAAGAATGATCATAATTCCTAGATACGCTCTCAATGAAGACCAGTCAAATGTTAATATAACTGTCAAGCGAAATGGATATCTCGAAAAAGGTTGTGATGCAAGCTTCTGAAAAAATAGGGATTTAAGGCATGTATATTCATTATTAAAAGCTTATATGAAGTTGGTAGAGATTGTTATTGTCACTATCATATGTATGAGTGTGACATTTTTCACAAAAATCGATGTGTCTTTGCCCCCTCATCTTATGATATTCACAACTTCTTTTTTCGTCCTTTACCCTCTCTAATCGAGTGATGGTATAATGATAAATCCAGTTCCCTCAGGCTGTCTTTCTCCGAGGGGATGTTTGCTTCTCTTGGTTTATGCAAAGTTCTCCATGATCAACAGCTTATTAGACTTTCCAAAATTGTTTCTTCTAGTCATCCTTGGGCATCCTGTTCCTTTTCCTGCAGTCATCTTAGTATTATCACTCTTTTCAATAGGTGCATAGTAGACCTTATTGTCTATAGCCTCATCACTCGCCCTGGGTTATTCCTCTTCCGTTAAGCTTTACAATAATTGATCTTCCCAACCCCTTTCCTTGGCTTTCTTCCTCAGGTGGGCTCTCCCTAAGAAGTACAACTAAGCGGGGCTTGCAAACTTTTAACTATTTTTCCATCCTTGCAAGCACTCGATACAAATTTAACCATCAGATTAGTTGGAGAGTCAAGTGATGTTTGTTGCCTTTGAAAGTGCTACATTTCCTCTCTAATAATAAGGTAAAATACTTACAAGAAGGGAGAAAGCCTGGAGCATTACGCTCCATGAAGAAAATGGTGTATTTAAGTTTAGAATGAGGCAACAATACTGCACCTACTTTTACTGGATAGGCATGTATGTTTGTCCACTGTACTCGAAACATCTGGATTGGGCCTCTTTTGTTAAATAATATCATTACTTTTTGAGGTGGAAGTGATATAGAATTTTATTTCTGAGAATGGATCTCCATTGAGAAAAAACAAGAGGAAGAAGGAGGAGGTTCCAGCTTTATTATTCAAGATAGGTAACATAATCACGTCACACTGATTGATAAACATTAAGTAATATGTACATACACTTTTTGAATAAAATGCGATTGACCATGCCTTTGGGGTGTCTTTTGTGGTCTATTTCAGCAAAATAATATTCTGTAACTGAAGTGAAATGAGTTCTTCCCATGAACTAGAAGCTGTCCTTTTTTTTTTTTTTTTTTTTTTTTGTGAAAAACCTAGAAATCATCCTTGTAAGCTGATATGGATGTACAGAGGATCCAACACTGGTTAGTCCATGATAATTGGAAAGAGCATATCATCTGGCATTAGATGACAGATTGTTTCCTGTATTTCAATTTTCAATAGTTGTTGTCAGATGAAAGGTTCATTTCTTCCAGAATCCCTTTTCTTTCTCTTTCTCTTTTTCCTTTTGCACTATGTGGAACATATATTTGTATAATGAGAAGCTTTATCTTCAGTTTATGAGCTTGACTGCCTAAACTTGGATGTCAAATAGATTCATTGAAGCTCTGGAAAAATAGCCCTAGCCTTGTTCGGTTTTAAACACAGAATTGTTCATAATGATTAAACATAGTTCTGGATCCAATATTAGATATCCATACTATTGATTACCAAAAAGAGAAATCAGTACTATTGTTTTCTCCTTTATGGTGGTAAATACATCAGTGAAATCAACTTGCAGATCAGATCTGGAAGCAGTCTTGACTGCAGTACTAAGAAATATATCTTCTCATGAGAGCCATCAATCTGAACCTAGTCCGGACAGGGAAATTCTCGACATTTTCCTCAATGCTGCAAATTTGACAACGGATGATACAAAATGCGCTGAAAGTTGTATGTCTTTTGAGGAATTTAAAAGTTGGTGTGCCCGTCTTCCATCAGTAAGGAAGTTTCTCGGAACTCTGTTGTCTACACGTGATTCAGGTTTCTGCTTTACAGTTCATCTTGTGTTTTCTATTTCTGTATTTCCACTTTTTTTCCTTGTCATTTGTAGTTTCTCTTAGAGGAATATCTTTTCTACATATTGGACATTGCTTACTGGGTGAATTTCTGTTGGGCTTAAATGTTAGCTTTTCTAACATTACTTCTATATTTGCTGAAACTTCTATGACAACTATGCATAATACTAGCTTTTCCATGTAATAGACATTTTACTTGTGTTCTCTTTGAAACTTAAATGTTATCATACATATGCCGGAGTTGTTAATTATACTGTTGTAGTTGCTGTTATGGGGATTCTCATAACCAGTAGCGTGCAAATGATTTTAAGTAAGCGGTGTCAACAATAAAATACGAGAACAAACGAGAATTCATTGTGATGATATCATATTGAAAAGGCAATCTAGATTTTAGTACTAAACATAATTTAAGCATATTGCCCAGTGGCATATCTAGGTGTGCGCCACGCTCAAAGTGTGATATGGTGCAACGGTTATTGGGTATACCTCTCTAAGTGAGGCCGGGGTTCAAAATCTATGTCTATCTTGTTATTTTTTTACTTCTTTCCCCATGCCTTTTGCATTTTAATTAAATTTTTTTTTTCTATCTGTGTTTAGTTTATTCTTCCAAAATTTCCAAGAATTCCTGTTCTCATTTTGTCGTCATAAAAATATATATTATTAAACCAAATATGTAAATTAAAATTAGTAGCAGTGAAGGATATAGCATATAGCCAGTGAGTTCAACTGATTCAAGACAAAATATCAGTACATATGTAACTATATAAAAATAATTAACTTTGAACATAAAATTCCAAAAGCATAATGGATCCAATGGTAAGAACTTAAAGGTTGAAACTCGTCAAAAATAACCTCATCGTAATAGTGCACCCATATTTTCGAATTCATGGATCTTCCTTCTGCATATTGCTAGAAGTCTTTTCGACGAGTTTTCATTCTTTAATTTGTATAATGATAACCTCATCAGAGATGCTTTAAACTAAGTCCTTTTTCATTTTGAGACACCAAAAGGAGGTGTAGCATAGTAATTTAGTTGATTGTTAGTGTATGACGATTTGGCTTCAATTCTTTGTAACCATGACTTTACTTATAACAACTCTAGAATATTGTCAGTTATGCACATTTAAGTTTGTGCAAAGAAATCTTTTTTTTAAAAAAATAATATTCATTCCACTTCTCCACCTCCAAAAATGAAAAAAAAACCCCAAAAAATGGTGAATTATTTCCCCAATTGCAAAACAGTGGTCAAGCTAGGGTGTAAACAGGGTTTACTAATCTATTAGTATTTTTTGCAGGCTCTGAGGTTCCTATGCTAGTATACCCAGAGAACATTGATCCTGCTGTAATATTGTTAAGAAAGGAATATGCTTGGCATATAGGTGGGGCCCTCCCACAAGACGAGCTGCATGAATGGAGACTTTTGTATCACAGTACAGTACATGGCCTAAGTTTCAGTACTTTCCTGGGGAACATTTCGTGAGTGGCTTCCTGCTTAATTATAAATGAGTTTCGTATTGAGTATTAACTTTCAATATCTTTGATATCATTGAGTTCCTTAAATTAGTTATAATTAGGTCAAAAGATTTTCTTGGTAGTCACCTTTTTTTCATGTTTACTTGGTGCTTGACAGAACATTTTTCAGCTTATTAGATCACTGAATATGCTTATATTATTATCTTTCAGTTTATCCTAACATCCACTTGCACAACTTGCTATTAGATGCCATTTTGATAGTTTTTTATTATAAAGGTTAAATGCCACGAGATCAGCTGCAGAGTTTACATAAGTATCCTTAGTTCAACGGACTTGAAATTTTGAGATAGTATCACACACATTTTACCAATAGGTTCCTAGCAAAACTAATTGCATTTTATAATGATAGATGCTTTCCTTAGGAAGGTTAGAGGTATCTGCCAGTTGCATTGATATATGAGTGGAGTAAGGGGTCATTTGGTAGTGTTTTAGCAAAAATAATGCATGCATTAGCTCTATGTATTAGTAATATCTTGTTTGGTGCACTTTTTCATGCTATGTATGCTAATTATACACTCTATTGTGTATTAGGGAGTGTATTGCAAATACCATGGATTTCTAGGTATAAGTAATGCAAAGGAATTATGCATGTATTATCATTCATGGTTAAAGACCCAATTACCCCCCAAATCCCCCTTTACATCTTTTTCACCATAATTATGGAGGATATTTTTATAAATAACTATTTTAATTCTTTGCATTCTATTTTTAATAAACCAAACCAAACAATGCATAAGAAATAATCTATGTATAATTAATTCAAGCATTGCTTCTGTACACTCTGCCAAACGACCCCTATGTGGCGTATTCCTGATCCACCCTCTAAGAAGCTGTGATATTTATCTATGGTGGTGATAGGGCATTGCATAATTCTCATGGCCCACTGCACTCTCCTTTTGAGATGCGCCACCCTTGTCCACCCCTGCTCTGTTTTGACTTGTATATGTGGTTTTCCCTACTTAGACCTAGCCTGCAGGCATTTCTACACACACTACATGCGCATGCAGCCTCGTTAAGTTTCAAGAATCATTCATTGTTTTCTTCATGAACTTTGCATAACCGAGTCTCAAACCAACCAAGAAACTAATAAGGCATCTATAACACAGTACGAAGAATCCAAGGACGACTCCAGAATTTGTTGTTGAAGGCTTGAAATGGCCATTGACACCCACAAATAAATCTCATTCATTAGCTGCATGAATCCCACCACATGAGCGTACACCATATTGACATGTGCCTTTTTTGTTGTAGTAGCTGAATGATAAAATTTGGCGCAACTAATGCATAAATGCCATCACTTTTTCCTCCCCTTTCTATGTCCGAGTGTGGTTAGTGTCAATTTTGTCAGCCAAGTATTAACCCCCTACTTGAACTGCAGAAATGACAAAGGACCAACTTTATTGGTAATTAAAGACAAAGAAGGCTATATTTACGGAGGTTATGCATCTCAGCCATGGGAGAAGCATGCTGACTTTTATGGGGATATGAAGTCTTTCCTCTTCCAGCTATACCCAAAGGCATCGGTTTACCGTCCTACTGGAGCGAACTCTAATTTACAGTGGGTAAGTTTCTGAACTTTTTGATATCAGTTACTTTATCCATATTAGCTGTCAAAAGAAATAATGGATGCACTTGGTATCGTTCAAGAAGGCCTCTCCATCTTCAGAACTTTAAAGTTCCTCCAACTCTCCAAAATTTTATTTTTCCTATAACCCCGTGGACTCTTCATTTCTCAAGTTGCAACTCGTTGCTATTGGTTACTATATTACCTATTGCCTTGGAATAGTAAGTGATTGTCTCACATTGACCAGCAGTCACCAAGATCCTTGATGGATTTTGGATTTTGAAGCTTGAGGTTAGTCATTCTTCTCTTGCCTTCTGAGGCTCGTTCAAGTCCCCTCAGTACAGCGGTGCTAATCTTCCTGGCTCCTTAAGCCTGGATGTTCAGATGTTGAAACAGTAAATACTTGCGAAGTGGAATTTTATTTATCAACTATCGAAGTAATACTAAGATGTTTAAGCTCTTTTCTTTCGGCAGTGTGCTATACATTTTAGTTCTGAGAGCATCCCCAATGGCATTGGTTTTGGAGGACGAGCACACCACTTCGGCTTGTTCATCTCAGCTAACTTTGACCTGGGGCATACTTTCACCTGCACGACCTTTGGCAGTCCTAGCTTGTCAAAGACCCACCAAATCTATCCAGAAGTGATAGAATGCTGGGGAGTTGCGATAAAAAGAGCTCAAGATAATCAGGATAGACTTCAAGGTACCGTGTTAGAAAGATTTAAAGAGGATCGCCATATGCTTAACATGGTTGGACTTGCAAATTCAAGTGAGTGATGTGCCCTCTGTACTTTCTTCTTGTGCTGAATTAGCACAGTTTCTAGAGTTTATTGTCTTGCGTGTAGTTTAATAATGTGTTGTGTTACTACAATATAAGTGAGTGCAAAATCACTAGATGCTCAACCCCGTGTATGCGTCGATAGCATCTAGAGTGTAATTTAAGGTTTTGCAATCATTACTATCCCTGGAGTCTTGGCAAATTTCTTCATGCCATTCTCCTAATCATTGTTAATAGTAATTGTCATTTTGAT</genome_strand>
        <mrna_strand>GAGAGTACTGTGAAGAAGCGAAAAGGGGGGAGAATTGGGATTTCGGAAGAGCAGAAAATGGGAAACTCTCAGTCGAATTCAACGAATCCACGTTTTGATTTAGCCAAGAG..............................................................................................AGCTTTCACAGAGAGGAAATTGGAAGACTTGAAATCGTTGTTCGATTCACTAGCTGCACAATCACAGAGCAATGGAAAATACGTTTCTTCTTCTGTTTTCAAG...................................................................................GCATATATTGGAGTTGAAGGGCCATTGGGTGATAGAATGTTCGATTTGGTCACCCAGAAGCGTAAGGATCAAAAGCTTACATATGAGGACCTTGTGATTGCTAAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAACCTATGAAAAAGGGACAAATGCTGATATTGAAGAGTTTATCTATCAGTTGTTAGATGTCTTTGATGATGGCGTTGTTGGAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGATCTGGAAGCAGTCTTGACTGCAGTACTAAGAAATATATCTTCTCATGAGAGCCATCAATCTGAACCTAGTCCGGACAGGGAAATTCTCGACATTTTCCTCAATGCTGCAAATTTGACAACGGATGATACAAAATGCGCTGAAAGTTGTATGTCTTTTGAGGAATTTAAAAGTTGGTGTGCCCGTCTTCCATCAGTAAGGAAGTTTCTCGGAACTCTGTTGTCTACACGTGATTCAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTGAGGTTCCTATGCTAGTATACCCAGAGAACATTGATCCTGCTGTAATATTGTTAAGAAAGGAATATGCTTGGCATATAGGTGGGGCCCTCCCACAAGACGAGCTGCATGAATGGAGACTTTTGTATCACAGTACAGTACATGGCCTAAGTTTCAGTACTTTCCTGGGGAACATTTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATGACAAAGGACCAACTTTATTGGTAATTAAAGACAAAGAAGGCTATATTTACGGAGGTTATGCATCTCAGCCATGGGAGAAGCATGCTGACTTTTATGGGGATATGAAGTCTTTCCTCTTCCAGCTATACCCAAAGGCATCGGTTTACCGTCCTACTGGAGCGAACTCTAATTTACAGTGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGCTATACATTTTAGTTCTGAGAGCATCCCCAATGGCATTGGTTTTGGAGGACGAGCACACCACTTCGGCTTGTTCATCTCAGCTAACTTTGACCTGGGGCATACTTTCACCTGCACGACCTTTGGCAGTCCTAGCTTGTCAAAGACCCACCAAATCTATCCAGAAGTGATAGAATGCTGGGGAGTTGCGATAAAAAGAGCTCAAGATAATCAGGATAGACTTCAAGGTACCGTGTTAGAAAGATTTAAAGAGGATCGCCATATGCTTAACATGGTTGGACTTGCAAATTCAAGTGAGTGATGTGCCCTCTGTACTTTCTTCTTGTGCTGAATTAGCACAGTTTCTAGAGTTTATTGTCTTGCGTGTAGTTTAATAATGTGTTGTGTTACTACAATATAAGTGAGTGCAAAATCACTAGATGCTCAACCCCGTGTATGCGTCGATAGCATCTAGAGTGTAATTTAAGGTTTTGCAATCATTACTATCCCTGGAGTCTTGGCAAATTTCTTCATGCCATTCTCCTAATCATTGTTAATAGTAATTGTCATTTTGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E207071" ref_strand="+" ref_description="SGN-E207071 [cLEC-30-D21]">
      <seq>ggagttgaagggccattgggtgatagaatgttcgatttggtcacccagaagcgtaaggatcaaaagcttacatatgaggaccttgtgattgctaaaggaacctatgaaaaagggacaaatgctgatattgaagagtttatctatcagttgttagatgtctttgatgatggcgttgttggaagatcagatctggaagcagtcttgactgcagtactaagaaatatatcttctcatgagagccatcaatctgaacctagtccggacagggaaattctcgacattttcctcaatgctgcaaatttgacaacggatgatacaaaatgcgctgaaagttgtatgtcttttgaggaatttaaaagttggtgtgcccgtcttccatcagtaaggaagtttctcggaactctgttgtctacacgtgattcaggctctgaggttcctatgctagtatacccagagaacattgatcctgctgtaatattgttaagaaaggaatatgcttggcatat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0101H16.1" temp_strand="+" temp_description="C02SLe0101H16.1  AC215444.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0101H16 sequenced_by:kribb upload_account_name:korea">
        <position start="37269" stop="46360"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="37569" g_stop="37664" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="96" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="37665" i_stop="41369" i_length="3705">
            <donor d_prob="0.860" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="41370" g_stop="41455" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="97" r_stop="182" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="41456" i_stop="44406" i_length="2951">
            <donor d_prob="0.914" d_score="1.00"/>
            <acceptor a_prob="0.968" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="44407" g_stop="44648" g_length="242"/>
          <reference_exon_boundary r_type="cDNA" r_start="183" r_stop="424" r_length="242" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="44649" i_stop="45978" i_length="1330">
            <donor d_prob="0.959" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="45979" g_stop="46060" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="425" r_stop="506" r_length="82" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0101H16.1" gen_strand="+" ref_id="SGN-E207071" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>506</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0101H16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E207071" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="37569" e_stop="37664"/>
          <exon e_start="41370" e_stop="41455"/>
          <exon e_start="44407" e_stop="44648"/>
          <exon e_start="45979" e_stop="46060"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAGTTGAAGGGCCATTGGGTGATAGAATGTTCGATTTGGTCACCCAGAAGCGTAAGGATCAAAAGCTTACATATGAGGACCTTGTGATTGCTAAAGTAAGTGTTTTTGATCTCATTCCACTGGGTGTTGAACTAGTTACCCTAAAGTTTCCTCATTTGTTGACTTGATGGTATACAAAGGCCTTTTTTGATGGAAGAATTCACCCAAATATCCCCCATCTCAACCCCATAAACTTAAAATAGCTGGCAGTTGTATAATATATATATATATAATCCATGTATAATATGTACATAACCATGTGTAATCTATGTATAGCGACGAAGGATATTTGGGTGAAGATCCTTTTTTTTTATCCGTTTTCCTATTAGCTTTTGTAGTTATGTAACTTAAGATGAAATTTATATGTCCATCCATTGTATTGTATGTTGATGGATTATCTAAGTTTCACGCCAAGCTGGCTGAACACCATGTCTATAAAGAAAACCTGGTGCACTAAGCTCCTCTATTAACGGGTTCATGTGAAGGACCAAATGGTAGTAGGTTTGTTGTATCCCGACTTGCATTTATTCAAGAGGCTGTTTTTACGGCTTAAACCTATGGCCAATATCATAAAAGAACATTTTTCTACACCTATTCATGACCTTTTGGTACGAGCTCAAGTGTATCATATGATCCACCTTCATTATTGTTATATCTTACAGTTGTCGTAATAATAGGACAAACGATTTCCATACTCTGCCCTTCACTCTATAAGAATAACAACATCATGAACATTATTGAATAGTTACAACCTCGATATACAAGGAACTAGATAGATGTTATTACATTTTATTTGAAAAAGAAGTACATCTACAATATGAAAACTACATATGAGTTTTCTATATATGCTCGCAGAAAACATCTAGTTCACAGTAAGGTTGAAAAAAGCGGGTTGTGTTAACCCAGATAGGTTCAGGATTAGGGGAAAGAAATAACCGATTGTGATGAAGCCTTATCCTCATGGTTTTCTATACTTAGCATGATATGGCTACTGGGTTTGGCATTAAATAGGCTAGAGCTTCCATTCTATTGCCTCCTGGTATTGAGGAGTATAACAAGGATTCTCACATCATGCGCGGGTGTGGGTAAAGAAATTAGTTCCACCAAAACAATATGTGGATGTGATGGTAGATGAGAAAGGATTCCCCATTGTAGTGGATATATAGAGTAATGGCAAAGGATTCCCCATTGTAGTGGATATATAGAGTAATATGTTTGTCAAAGATAGTCTATTTCGAATAGGTAGTTGGAACATAGGTTGATTTATAGGGAAGTCAAAGAATCTTTTCTGATAGGTATGAAGAATTAAATGAAATCAATGTCTAGCTGAAACAGGACTATAGGAGAACAACTATGTTGTATGTCTACAAAGAGACTTGGTGTAAAGGAGACAAGGTTAAAGAGATGAACAAAACAAGCTATAATTTGTGGTGTTTTGGTTTGTGAGAGATCCAAGTAGGCACGGGTTAGAAATCATGTAGAACCAGGACATAAATATAAAGTTGCAGAAGTTAAAAACATGTTGATAGGATTATCTTAGTGTGGGAAAGAAAACAAAAAGTACCGTTAGTGCATAGGCTTCACAAATAGAATTAGATGAGGAAGCAGAAACTAAATTTTAAAAATATAGATCTCCATTGGTACAAGGGGGTTCTAGGTGACCAACAAACGTTTGTACAAGGAGATTTGAATGGATATGGGGTTAGATATGTGACACTTAAACTGAGTACATAACAAATATTGTGGTACAATCAATGGAGAAGGGAATGTTTTAAAGTTTGCATTAGCTTCTTATCTCTATTTTTAGGCTTTCAACTAAGACCTACTTTGAAGAAAGAGAACAACATTTGATGGTAATTAAGAGAGAAAGCAGCAATAACCAAATAAACTTCATTCTTACTAAAGGAAGTGACAATTCCACATTTAAGGACAGCAATGTTATACCATGAGAAGACCCAGTCCTAACCATCCAAAGTAGACTGATGCTCTTGCATGTAGAGCGAGAGAATGGAGTGAAAATGGAAAAGAGAAATATGCAACCAGATTTTAATATGCCCACTAAAAGGTTTAAACCACAAAACGTTCAAGGACAAACTATTGGAGGATGGAGCCTGTGACTTAGAAGTAGAGATAAGATCTGCAGAAGTAAATGCAAGTTACATCTTTATTCTTTACTGCATTTGAGTGCAAATGCCATTTTCTATTAGATTGTATGCCAATCTAGTGCATATAGGACTTCCAATAGAATGAAGAGTGATAAGCATGGAAGAGATGTAGAGATTGTCATCATGCTTATGGAAAAGACAAGTGTGCATGTGTGTCTTACCCTGATTTAGTCTACAGAAAACTGAGTTGTAGAAGCTACAGAAGACACTTGGTAGTTTTTGCAGTTTAACTAAGATGAAAGTAAAAGGAATTTTTATATTGGTTAGGATCACAATATTTTTCTTAGTCTTATATGGTTTCTCAGCGCGTTCACCACTAACACGGCTAAGTCGGTTTTCACCGGATCACCAAAACCGCATGCCACATCTTGGTGTGAAAACAAGTGTGTGTGGTGGGTGGGTGGGATTTCAAGACAATGCTGGGGGAGCTATATCCTAACGTCATTGGTATATCAAGGGTCATGCCTTTGAAGATTAGAAGCTGACTGTAGTGCTGGAAATTCCACTAAATCTGAAGCAGATCTCAGAAACTATTCCCTTTTGCATAGTTGTACTATTTGGTTGGAGAGGAACAATTCTTGTTTGAAGGAAAAAAGAGACTTCTTTCTAGAATTAATAATTATTGTCCACAGAATTTATATTTTTGGTGTCACTGCAGTATTGACTTTGAGTCTGTTAGGACCAAGGAGGAGTCACTTGATAATCTATTGTAATGGTATGTTGTTGAGTCATTTACTGCTCTGTACCTTCTTGGTACTTTATAAATAGAACTTGACCTTATCATAAAAAGAAAAAGCGACCACATTTTCATCCCTTGCATAGGTTCTATAGGTTGCCTTCTGTGGGAATTTCATTCCTTGATTCTTGGTAGCCGGATATTTAGTTAATTAGTTTCACTCCACTGGATCCTTTTCTTCAGTCAATCATAGATTGGTTTCTTTGGTAAATCTTGATTGATTTGTACCAGATCTTCATTAACGTATAGTTGACCGGATCATCATTAGCGTATTGCTGTGCATTCAAAACTTCACCATATTAGTGGCATACCCCTTTCAAGGAAAAGATCGTTGTCATCATTAAAATCCTCCCGATACTCGGGGTAGTAATGACTGAAACATGATTTACTTACTATGGTAGGACTCACTGGATAAGCTCAATGGCTGAGCTAGGGCCTAGCTTAATGGGATGAAGAGATGCTTTAACAGAAGACGCAAGACTTAGTCAACTTAATCAACTGCTGGGTATGGTGCTTTCATGTGTCTATCTTACCCTTAAAACAGCCATAATAAGCCTTTTTGATGTTATCTTTTTCTCCTGGAATTTGAGGACTCTCTAGAAATTCATGGCTTCTCCTTATGTGCCATTTCAATTAATCAAGTTTCTTACCAGCATATAGATGCCCCCTCTAGACAACCGTAGTGAAGAGCACAGTTGCCGAGAAAGGTGTTATATTTGTTAACTGTAATTCATTCAGATAATCATTACCCTTTACTGCATAAAGGTGGACATGTATCTCTCTACCTGTGAAGTTTCTATTACGAGTAATAATTGAAAAATATGAACTCATGGTGTATGATTCCACTTTTTATATTGCAGGGAACCTATGAAAAAGGGACAAATGCTGATATTGAAGAGTTTATCTATCAGTTGTTAGATGTCTTTGATGATGGCGTTGTTGGAAGGTAGAACAATAAGCTTCAATATGTTTAAGGCTATGTACAGTTTGGTCCCTCTAGATTTAGTTTTTCATATGTAACTATGCTCGACTTCCAAAATGTGTCAATTATCACTCTTGATCCATGGGGTAAAGTTAAAAAGTCCAAACTAACTTTTTAGTGGAATCGGCAATATCACCAGCTCAAACTTTTTACCTAGAGAACAACTGGAAGAGGTTCTTACTGTAGGTAGGTTGAAGTCATAGAGGGTTGTCGGTCATTTTGATTCGTGAGGGCATCACGTTTTGGGTAAAAGGGTGGACTAGCTATTTGAAGATTTATGTGCTAAATTTCAGTTAGTTTAGTGAGAAGGCTCTCCTAAAAGTACTAGCCAAGGGGGTACACTTGCCATAAGTTGACTTTAAAAAATCTACTCTTTCACTTTCCCCATTGATTCTGCTCCCCCCTGAAAGATGCTGTAATGTGAAGGACATTAGAAAAAAAAAACTTTAAAGTGAAGGATTATTAGAAAAAAATACTGTAAGGTGAAGGGAAGTTACACATTATGTGAAAATCGAGGGGAGTTTTGTTTTACAAGTCTGCAATTAGAGGAAGTAAATTGTAATTACACTATTTTTAATTCAATTAAATGCTTTATCTTTATCCTCCCAAATTAAATTTTAACCCTTTTTCACAGAAAAGCAACTGCTTGGTACAGCTGAGATAGTTTGTGCTCTGTTTTTGCACAGTTGAGGCAGTTATTTTTCCTTCCACACTAGGAGAACCAGGGATAACTTAAACATTCGTTTTATCTTGACCTTGTTTATATTGAACTGACTTGTGAGATTCTCACTTTGGACTTATCTCTTTGTTTTTATTTATTTTAATATTTTTCATTCAAGATACAATTGAGGTATTCTAGTCTTAACACTGACTTGAAAGCTGCTTAGACATCTCAGATTCTTTAGGTCTAGGATACTTTTTTTCATAACTAAGAATCCCTGATGTCTAGTAGTACACGGTTTAAAACTTGGTGGATGATGGTCCACTATACCCTTCTCCACTTAAATTTCCAGCTTTTATAAATGGCAAATGATAATATTTGAAACCACGATGTGTGCCTAAATAACATATTATTTGTTGCGCTTTTACTACGAGTAGACCAATGCCCAGGGGGGCATCTCTTGGACTACTTTAAAATGATAATGATGAGAAGATGATCATTATCAAGATGCTAATGTTATGGAGAGGACGGATCTTAGTAAAAGAATGATCATAATTCCTAGATACGCTCTCAATGAAGACCAGTCAAATGTTAATATAACTGTCAAGCGAAATGGATATCTCGAAAAAGGTTGTGATGCAAGCTTCTGAAAAAATAGGGATTTAAGGCATGTATATTCATTATTAAAAGCTTATATGAAGTTGGTAGAGATTGTTATTGTCACTATCATATGTATGAGTGTGACATTTTTCACAAAAATCGATGTGTCTTTGCCCCCTCATCTTATGATATTCACAACTTCTTTTTTCGTCCTTTACCCTCTCTAATCGAGTGATGGTATAATGATAAATCCAGTTCCCTCAGGCTGTCTTTCTCCGAGGGGATGTTTGCTTCTCTTGGTTTATGCAAAGTTCTCCATGATCAACAGCTTATTAGACTTTCCAAAATTGTTTCTTCTAGTCATCCTTGGGCATCCTGTTCCTTTTCCTGCAGTCATCTTAGTATTATCACTCTTTTCAATAGGTGCATAGTAGACCTTATTGTCTATAGCCTCATCACTCGCCCTGGGTTATTCCTCTTCCGTTAAGCTTTACAATAATTGATCTTCCCAACCCCTTTCCTTGGCTTTCTTCCTCAGGTGGGCTCTCCCTAAGAAGTACAACTAAGCGGGGCTTGCAAACTTTTAACTATTTTTCCATCCTTGCAAGCACTCGATACAAATTTAACCATCAGATTAGTTGGAGAGTCAAGTGATGTTTGTTGCCTTTGAAAGTGCTACATTTCCTCTCTAATAATAAGGTAAAATACTTACAAGAAGGGAGAAAGCCTGGAGCATTACGCTCCATGAAGAAAATGGTGTATTTAAGTTTAGAATGAGGCAACAATACTGCACCTACTTTTACTGGATAGGCATGTATGTTTGTCCACTGTACTCGAAACATCTGGATTGGGCCTCTTTTGTTAAATAATATCATTACTTTTTGAGGTGGAAGTGATATAGAATTTTATTTCTGAGAATGGATCTCCATTGAGAAAAAACAAGAGGAAGAAGGAGGAGGTTCCAGCTTTATTATTCAAGATAGGTAACATAATCACGTCACACTGATTGATAAACATTAAGTAATATGTACATACACTTTTTGAATAAAATGCGATTGACCATGCCTTTGGGGTGTCTTTTGTGGTCTATTTCAGCAAAATAATATTCTGTAACTGAAGTGAAATGAGTTCTTCCCATGAACTAGAAGCTGTCCTTTTTTTTTTTTTTTTTTTTTTTTGTGAAAAACCTAGAAATCATCCTTGTAAGCTGATATGGATGTACAGAGGATCCAACACTGGTTAGTCCATGATAATTGGAAAGAGCATATCATCTGGCATTAGATGACAGATTGTTTCCTGTATTTCAATTTTCAATAGTTGTTGTCAGATGAAAGGTTCATTTCTTCCAGAATCCCTTTTCTTTCTCTTTCTCTTTTTCCTTTTGCACTATGTGGAACATATATTTGTATAATGAGAAGCTTTATCTTCAGTTTATGAGCTTGACTGCCTAAACTTGGATGTCAAATAGATTCATTGAAGCTCTGGAAAAATAGCCCTAGCCTTGTTCGGTTTTAAACACAGAATTGTTCATAATGATTAAACATAGTTCTGGATCCAATATTAGATATCCATACTATTGATTACCAAAAAGAGAAATCAGTACTATTGTTTTCTCCTTTATGGTGGTAAATACATCAGTGAAATCAACTTGCAGATCAGATCTGGAAGCAGTCTTGACTGCAGTACTAAGAAATATATCTTCTCATGAGAGCCATCAATCTGAACCTAGTCCGGACAGGGAAATTCTCGACATTTTCCTCAATGCTGCAAATTTGACAACGGATGATACAAAATGCGCTGAAAGTTGTATGTCTTTTGAGGAATTTAAAAGTTGGTGTGCCCGTCTTCCATCAGTAAGGAAGTTTCTCGGAACTCTGTTGTCTACACGTGATTCAGGTTTCTGCTTTACAGTTCATCTTGTGTTTTCTATTTCTGTATTTCCACTTTTTTTCCTTGTCATTTGTAGTTTCTCTTAGAGGAATATCTTTTCTACATATTGGACATTGCTTACTGGGTGAATTTCTGTTGGGCTTAAATGTTAGCTTTTCTAACATTACTTCTATATTTGCTGAAACTTCTATGACAACTATGCATAATACTAGCTTTTCCATGTAATAGACATTTTACTTGTGTTCTCTTTGAAACTTAAATGTTATCATACATATGCCGGAGTTGTTAATTATACTGTTGTAGTTGCTGTTATGGGGATTCTCATAACCAGTAGCGTGCAAATGATTTTAAGTAAGCGGTGTCAACAATAAAATACGAGAACAAACGAGAATTCATTGTGATGATATCATATTGAAAAGGCAATCTAGATTTTAGTACTAAACATAATTTAAGCATATTGCCCAGTGGCATATCTAGGTGTGCGCCACGCTCAAAGTGTGATATGGTGCAACGGTTATTGGGTATACCTCTCTAAGTGAGGCCGGGGTTCAAAATCTATGTCTATCTTGTTATTTTTTTACTTCTTTCCCCATGCCTTTTGCATTTTAATTAAATTTTTTTTTTCTATCTGTGTTTAGTTTATTCTTCCAAAATTTCCAAGAATTCCTGTTCTCATTTTGTCGTCATAAAAATATATATTATTAAACCAAATATGTAAATTAAAATTAGTAGCAGTGAAGGATATAGCATATAGCCAGTGAGTTCAACTGATTCAAGACAAAATATCAGTACATATGTAACTATATAAAAATAATTAACTTTGAACATAAAATTCCAAAAGCATAATGGATCCAATGGTAAGAACTTAAAGGTTGAAACTCGTCAAAAATAACCTCATCGTAATAGTGCACCCATATTTTCGAATTCATGGATCTTCCTTCTGCATATTGCTAGAAGTCTTTTCGACGAGTTTTCATTCTTTAATTTGTATAATGATAACCTCATCAGAGATGCTTTAAACTAAGTCCTTTTTCATTTTGAGACACCAAAAGGAGGTGTAGCATAGTAATTTAGTTGATTGTTAGTGTATGACGATTTGGCTTCAATTCTTTGTAACCATGACTTTACTTATAACAACTCTAGAATATTGTCAGTTATGCACATTTAAGTTTGTGCAAAGAAATCTTTTTTTTAAAAAAATAATATTCATTCCACTTCTCCACCTCCAAAAATGAAAAAAAAACCCCAAAAAATGGTGAATTATTTCCCCAATTGCAAAACAGTGGTCAAGCTAGGGTGTAAACAGGGTTTACTAATCTATTAGTATTTTTTGCAGGCTCTGAGGTTCCTATGCTAGTATACCCAGAGAACATTGATCCTGCTGTAATATTGTTAAGAAAGGAATATGCTTGGCATAT</genome_strand>
        <mrna_strand>GGAGTTGAAGGGCCATTGGGTGATAGAATGTTCGATTTGGTCACCCAGAAGCGTAAGGATCAAAAGCTTACATATGAGGACCTTGTGATTGCTAAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAACCTATGAAAAAGGGACAAATGCTGATATTGAAGAGTTTATCTATCAGTTGTTAGATGTCTTTGATGATGGCGTTGTTGGAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGATCTGGAAGCAGTCTTGACTGCAGTACTAAGAAATATATCTTCTCATGAGAGCCATCAATCTGAACCTAGTCCGGACAGGGAAATTCTCGACATTTTCCTCAATGCTGCAAATTTGACAACGGATGATACAAAATGCGCTGAAAGTTGTATGTCTTTTGAGGAATTTAAAAGTTGGTGTGCCCGTCTTCCATCAGTAAGGAAGTTTCTCGGAACTCTGTTGTCTACACGTGATTCAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTGAGGTTCCTATGCTAGTATACCCAGAGAACATTGATCCTGCTGTAATATTGTTAAGAAAGGAATATGCTTGGCATAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E230425" ref_strand="+" ref_description="SGN-E230425 [cLEL-35-N5](-)">
      <seq>aaattctatccagaagtgatagaaatgctggggaagttgcgataaaaagagctcaagataatcaggatagacttcaaggtaccgtgttagaaagatttaaagaggatcgccatatgcttaacatggttggacttgcaaattcaagtgagtgatgtgccctctgtactttcttcttgtgctgaattagcacagtttctagagtttattgtcttgcgtgtagtttaataatgtgttgtgttactacaatataagtgagtgcaaaatcactagatgctcaaccccgtgtatgcgtcgatagcatctagagtgtaatttaaggttttgcaatcattactatccctggagtcttggcaaatttcttcatgccattctccaaatcattgttaatagtaattgtcattttgatgtaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0101H16.1" temp_strand="+" temp_description="C02SLe0101H16.1  AC215444.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0101H16 sequenced_by:kribb upload_account_name:korea">
        <position start="48109" stop="49114"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="48408" g_stop="48815" g_length="408"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="410" r_length="410" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0101H16.1" gen_strand="+" ref_id="SGN-E230425" ref_strand="+">
        <total_alignment_score>0.980</total_alignment_score>
        <cumulative_length_of_scored_exons>408</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0101H16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E230425" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="48408" e_stop="48815"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAATCTATCCAGAAGTGATAGA-ATGCTGGGG-AGTTGCGATAAAAAGAGCTCAAGATAATCAGGATAGACTTCAAGGTACCGTGTTAGAAAGATTTAAAGAGGATCGCCATATGCTTAACATGGTTGGACTTGCAAATTCAAGTGAGTGATGTGCCCTCTGTACTTTCTTCTTGTGCTGAATTAGCACAGTTTCTAGAGTTTATTGTCTTGCGTGTAGTTTAATAATGTGTTGTGTTACTACAATATAAGTGAGTGCAAAATCACTAGATGCTCAACCCCGTGTATGCGTCGATAGCATCTAGAGTGTAATTTAAGGTTTTGCAATCATTACTATCCCTGGAGTCTTGGCAAATTTCTTCATGCCATTCTCCTAATCATTGTTAATAGTAATTGTCATTTTGATGTAT</genome_strand>
        <mrna_strand>AAATTCTATCCAGAAGTGATAGAAATGCTGGGGAAGTTGCGATAAAAAGAGCTCAAGATAATCAGGATAGACTTCAAGGTACCGTGTTAGAAAGATTTAAAGAGGATCGCCATATGCTTAACATGGTTGGACTTGCAAATTCAAGTGAGTGATGTGCCCTCTGTACTTTCTTCTTGTGCTGAATTAGCACAGTTTCTAGAGTTTATTGTCTTGCGTGTAGTTTAATAATGTGTTGTGTTACTACAATATAAGTGAGTGCAAAATCACTAGATGCTCAACCCCGTGTATGCGTCGATAGCATCTAGAGTGTAATTTAAGGTTTTGCAATCATTACTATCCCTGGAGTCTTGGCAAATTTCTTCATGCCATTCTCCAAATCATTGTTAATAGTAATTGTCATTTTGATGTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E337335" ref_strand="+" ref_description="SGN-E337335 [cTOE-18-A16]">
      <seq>ataatcaggatagacttcaaggtaccgtgttagaaagatttaaagaggatcgccatatgcttaacatggttggacttgcaaattcaagtgagtgatgtgccctctgtactttcttcttgtgctgaattagcacagtttctagagtttattgtcttgcgtgtagtttaataatgtgttgtgttactacaatataagtgagtgcaaaatcactagatgctcaaccccgtgtatgcgtcgatagcatctagagtgtaatttaaggttttgcaatcattactatccctggagtcttggcaaatttcttcatgccattctcctaatcattgttaatagtaattgtcattttgatgtaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0101H16.1" temp_strand="+" temp_description="C02SLe0101H16.1  AC215444.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0101H16 sequenced_by:kribb upload_account_name:korea">
        <position start="48163" stop="49114"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="48463" g_stop="48813" g_length="351"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="351" r_length="351" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="352" polyA_stop="390"/>
      <MATCH_line gen_id="C02SLe0101H16.1" gen_strand="+" ref_id="SGN-E337335" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>351</cumulative_length_of_scored_exons>
        <coverage percentage="0.900" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0101H16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E337335" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="48463" e_stop="48813"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATAATCAGGATAGACTTCAAGGTACCGTGTTAGAAAGATTTAAAGAGGATCGCCATATGCTTAACATGGTTGGACTTGCAAATTCAAGTGAGTGATGTGCCCTCTGTACTTTCTTCTTGTGCTGAATTAGCACAGTTTCTAGAGTTTATTGTCTTGCGTGTAGTTTAATAATGTGTTGTGTTACTACAATATAAGTGAGTGCAAAATCACTAGATGCTCAACCCCGTGTATGCGTCGATAGCATCTAGAGTGTAATTTAAGGTTTTGCAATCATTACTATCCCTGGAGTCTTGGCAAATTTCTTCATGCCATTCTCCTAATCATTGTTAATAGTAATTGTCATTTTGATGT</genome_strand>
        <mrna_strand>ATAATCAGGATAGACTTCAAGGTACCGTGTTAGAAAGATTTAAAGAGGATCGCCATATGCTTAACATGGTTGGACTTGCAAATTCAAGTGAGTGATGTGCCCTCTGTACTTTCTTCTTGTGCTGAATTAGCACAGTTTCTAGAGTTTATTGTCTTGCGTGTAGTTTAATAATGTGTTGTGTTACTACAATATAAGTGAGTGCAAAATCACTAGATGCTCAACCCCGTGTATGCGTCGATAGCATCTAGAGTGTAATTTAAGGTTTTGCAATCATTACTATCCCTGGAGTCTTGGCAAATTTCTTCATGCCATTCTCCTAATCATTGTTAATAGTAATTGTCATTTTGATGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E346881" ref_strand="+" ref_description="SGN-E346881 [cTOF-32-I8]">
      <seq>ggttagaggcatttctcttaagctacaagaggaagagagagaacgccgtatggacttcgttcctgatgaatctgctattaatactgagaggattgaagttgataaggaaactattgacttgcttgcttcaatgggtatgagcgaattacctggtgttgtactcaaagaagagcagacggtggctattgctggacctgttggtggatttggcggtggtcgtggtgggttcggcggcggacgtggaggtcgtggtggttactgagatcggtttgttcgttttttttttggttatgagaagttatttttgctgaattgtagacttgattttatctgattattgtttaaatttgggattttgtgaactaatttagtatttttgaatctctgagtaatgtgcatttctctctatgaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0101H16.1" temp_strand="-" temp_description="C02SLe0101H16.1  AC215444.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0101H16 sequenced_by:kribb upload_account_name:korea">
        <position start="50202" stop="43608"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="49902" g_stop="49492" g_length="411"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="411" r_length="411" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="49491" i_stop="48976" i_length="516">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.122" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="48975" g_stop="48956" g_length="20"/>
          <reference_exon_boundary r_type="cDNA" r_start="412" r_stop="431" r_length="20" r_score="0.550"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0101H16.1" gen_strand="-" ref_id="SGN-E346881" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>431</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0101H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E346881" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="49902" e_stop="49492"/>
          <exon e_start="48975" e_stop="48956"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTTAGAGGCATTTCTCTTAAGCTACAAGAGGAAGAGAGAGAACGCCGTATGGACTTCGTTCCTGATGAATCTGCTATTAATACTGAGAGGATTGAAGTTGATAAGGAAACTATTGACTTGCTTGCTTCAATGGGTATGAGCGAATTACCTGGTGTTGTACTCAAAGAAGAGCAGACGGTGGCTATTGCTGGACCTGTTGGTGGATTTGGCGGTGGTCGTGGTGGGTTCGGCGGCGGACGTGGAGGTCGTGGTGGTTACTGAGATCGGTTTGTTCGTTTTTTTTTTGGTTATGAGAAGTTATTTTTGCTGAATTGTAGACTTGATTTTATCTGATTATTGTTTAAATTTGGGATTTTGTGAACTAATTTAGTATTTTTGAATCTCTGAGTAATGTGCATTTCTCTCTATGAATTGAATATTGCATTTTTACCAAGCTTTTGTTTTTTCTTAAACTACGTGTGTTTCTGTTTACGAGGTTTATCGAAAATAAAATCTCTAAAATGGCAAGTTATGTACCATGAAGCCCATGATAGTCAGTTTTTGTTATTAAACTAACGAAGGAATATATTTGATTTAATCATAAAATTGAATCGAATCTCATTGCTTCGATTCATAAATGTGAAAGGAAAGGAAAAAGGTTTTGTTGCGTTTTATTCATGGTTTGTTTCGAGAAATCTATGGATATAATTATATATGATTAACGAAAATATGCAAAACTCTTTTTTCTTGAAACCTACATGTTTTATTTCGACACTATTTCTTATTGCATTCATGTTTTGTTTCATAAATGAAATGTTTTTAACACAAAAAAAAATGTTATTTGATTGAGATATCTTCTTCAGACGTCACTTGTAAAATTACAATATTGTTGAACTGTCTCGATTGAAGATTTAATTATCTTTTATTTTTCTCATTTCACATATTAGAATGGAGAACAATATGTAAA</genome_strand>
        <mrna_strand>GGTTAGAGGCATTTCTCTTAAGCTACAAGAGGAAGAGAGAGAACGCCGTATGGACTTCGTTCCTGATGAATCTGCTATTAATACTGAGAGGATTGAAGTTGATAAGGAAACTATTGACTTGCTTGCTTCAATGGGTATGAGCGAATTACCTGGTGTTGTACTCAAAGAAGAGCAGACGGTGGCTATTGCTGGACCTGTTGGTGGATTTGGCGGTGGTCGTGGTGGGTTCGGCGGCGGACGTGGAGGTCGTGGTGGTTACTGAGATCGGTTTGTTCGTTTTTTTTTTGGTTATGAGAAGTTATTTTTGCTGAATTGTAGACTTGATTTTATCTGATTATTGTTTAAATTTGGGATTTTGTGAACTAATTTAGTATTTTTGAATCTCTGAGTAATGTGCATTTCTCTCTATGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E250430" ref_strand="+" ref_description="SGN-E250430 [cLEG-6-D18]">
      <seq>gccccttcgccgccgtcccggtaagtagcaatgggtcgtgtccgtacaaaaacagtgaagaaatcttcacgtcaagtgattgagcgttactactcaaaaatgactttagatttccacacaaacaagaagattctcgaagaagttgctatcatcccatcgaagcgtctccgcaacaagatcgctggattctctactcatctgatgaagcgaatccaaaaaggtccggttagaggcatttctcttaagctacaagaggaagagagagaacgccgtatggacttcgttcctgatgaatctgctattaatactgagaggattgaagttgataaggaaactattgacttgcttgcttncaatgggttaaaatgagcgaattacctggtgttgtactcaaagaagagcagacggtggctattgctggacctgttggtggatttggcggtggtcgtggtgggttcggcggcggacgtggaggtcgtggtggttactgagatcggtttgttcgttttttttttggttatgagaagttatttttgctgaattgtagacttgattttatctgattattgtttaaatttgggattttgtgaactaatttaagatttttgaatctttgagtaatgtgcatttctctctatgaattgaatatttgcatttttaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0101H16.1" temp_strand="-" temp_description="C02SLe0101H16.1  AC215444.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0101H16 sequenced_by:kribb upload_account_name:korea">
        <position start="50426" stop="49169"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="50126" g_stop="49465" g_length="662"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="668" r_length="668" r_score="0.968"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0101H16.1" gen_strand="-" ref_id="SGN-E250430" ref_strand="+">
        <total_alignment_score>0.968</total_alignment_score>
        <cumulative_length_of_scored_exons>662</cumulative_length_of_scored_exons>
        <coverage percentage="0.991" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0101H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E250430" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="50126" e_stop="49465"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCCCCTTCGCCGCCGTCCCGGTAAGTAGCAATGGGTCGTGTCCGTACAAAAACAGTGAAGAAATCTTCACGTCAAGTGATTGAGCGTTACTACTCAAAAATGACTTTAGATTTCCACACAAACAAGAAGATTCTCGAAGAAGTTGCTATCATCCCATCGAAGCGTCTCCGCAACAAGATCGCTGGATTCTCTACTCATCTGATGAAGCGAATCCAAAAAGGTCCGGTTAGAGGCATTTCTCTTAAGCTACAAGAGGAAGAGAGAGAACGCCGTATGGACTTCGTTCCTGATGAATCTGCTATTAATACTGAGAGGATTGAAGTTGATAAGGAAACTATTGACTTGCTTGCTT-CAATGGG-T---ATGAGCGAATTACCTGGTGTTGTACTCAAAGAAGAGCAGACGGTGGCTATTGCTGGACCTGTTGGTGGATTTGGCGGTGGTCGTGGTGGGTTCGGCGGCGGACGTGGAGGTCGTGGTGGTTACTGAGATCGGTTTGTTCGTTTTTTTTTTGGTTATGAGAAGTTATTTTTGCTGAATTGTAGACTTGATTTTATCTGATTATTGTTTAAATTTGGGATTTTGTGAACTAATTTAGTATTTTTGAATCTCTGAGTAATGTGCATTTCTCTCTATGAATTGAATA-TTGCATTTTTACCAAGCTT</genome_strand>
        <mrna_strand>GCCCCTTCGCCGCCGTCCCGGTAAGTAGCAATGGGTCGTGTCCGTACAAAAACAGTGAAGAAATCTTCACGTCAAGTGATTGAGCGTTACTACTCAAAAATGACTTTAGATTTCCACACAAACAAGAAGATTCTCGAAGAAGTTGCTATCATCCCATCGAAGCGTCTCCGCAACAAGATCGCTGGATTCTCTACTCATCTGATGAAGCGAATCCAAAAAGGTCCGGTTAGAGGCATTTCTCTTAAGCTACAAGAGGAAGAGAGAGAACGCCGTATGGACTTCGTTCCTGATGAATCTGCTATTAATACTGAGAGGATTGAAGTTGATAAGGAAACTATTGACTTGCTTGCTTNCAATGGGTTAAAATGAGCGAATTACCTGGTGTTGTACTCAAAGAAGAGCAGACGGTGGCTATTGCTGGACCTGTTGGTGGATTTGGCGGTGGTCGTGGTGGGTTCGGCGGCGGACGTGGAGGTCGTGGTGGTTACTGAGATCGGTTTGTTCGTTTTTTTTTTGGTTATGAGAAGTTATTTTTGCTGAATTGTAGACTTGATTTTATCTGATTATTGTTTAAATTTGGGATTTTGTGAACTAATTTAAGATTTTTGAATCTTTGAGTAATGTGCATTTCTCTCTATGAATTGAATATTTGCATTTTTAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E714164" ref_strand="+" ref_description="SGN-E714164 [FB10CG09]">
      <seq>gagctcgaaccccccgccccttcgccgccgtcccggtaagtagcaatgggtcgtgtccgtacaaaaacagtgaagaaatcttcacgtcaagtgattgagcgttactactcaaaaatgactttagatttccacacaaacaagaagattctcgaagaagttgctatcatcccatcgaagcgtctccgcaacaagatcgctggattctctactcatctgatgaagcgaatccaaaaaggtccggttagaggcatttctcttaagctacaagaggaagagagagaacgccgtatggacttcgttcctgatgaatctgctattaatactgagaggattgaagttgataaggaaactattgacttgcttgcttcaatgggtatgagcgaattacctggtgttgtactcaaagaagagcagacggtggctattgctggacctgttggtggatttggcggtggtcgtggtgggttcggcggcggacgtggaggtcgtggtggttactgagatcggtttgttcgttttttttttggttatgagaagttatttttgctgaattgtagacttgattttatctgattattgtttaaatttgggattttgtgaactaatttagtatttttgaatctctgagtaatgtgcatttctctctatgaattgaatattgcatttttac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0101H16.1" temp_strand="-" temp_description="C02SLe0101H16.1  AC215444.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0101H16 sequenced_by:kribb upload_account_name:korea">
        <position start="50441" stop="49172"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="50141" g_stop="49472" g_length="670"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="670" r_length="670" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0101H16.1" gen_strand="-" ref_id="SGN-E714164" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>670</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0101H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E714164" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="50141" e_stop="49472"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGCTCGAACCCCCCGCCCCTTCGCCGCCGTCCCGGTAAGTAGCAATGGGTCGTGTCCGTACAAAAACAGTGAAGAAATCTTCACGTCAAGTGATTGAGCGTTACTACTCAAAAATGACTTTAGATTTCCACACAAACAAGAAGATTCTCGAAGAAGTTGCTATCATCCCATCGAAGCGTCTCCGCAACAAGATCGCTGGATTCTCTACTCATCTGATGAAGCGAATCCAAAAAGGTCCGGTTAGAGGCATTTCTCTTAAGCTACAAGAGGAAGAGAGAGAACGCCGTATGGACTTCGTTCCTGATGAATCTGCTATTAATACTGAGAGGATTGAAGTTGATAAGGAAACTATTGACTTGCTTGCTTCAATGGGTATGAGCGAATTACCTGGTGTTGTACTCAAAGAAGAGCAGACGGTGGCTATTGCTGGACCTGTTGGTGGATTTGGCGGTGGTCGTGGTGGGTTCGGCGGCGGACGTGGAGGTCGTGGTGGTTACTGAGATCGGTTTGTTCGTTTTTTTTTTGGTTATGAGAAGTTATTTTTGCTGAATTGTAGACTTGATTTTATCTGATTATTGTTTAAATTTGGGATTTTGTGAACTAATTTAGTATTTTTGAATCTCTGAGTAATGTGCATTTCTCTCTATGAATTGAATATTGCATTTTTAC</genome_strand>
        <mrna_strand>GAGCTCGAACCCCCCGCCCCTTCGCCGCCGTCCCGGTAAGTAGCAATGGGTCGTGTCCGTACAAAAACAGTGAAGAAATCTTCACGTCAAGTGATTGAGCGTTACTACTCAAAAATGACTTTAGATTTCCACACAAACAAGAAGATTCTCGAAGAAGTTGCTATCATCCCATCGAAGCGTCTCCGCAACAAGATCGCTGGATTCTCTACTCATCTGATGAAGCGAATCCAAAAAGGTCCGGTTAGAGGCATTTCTCTTAAGCTACAAGAGGAAGAGAGAGAACGCCGTATGGACTTCGTTCCTGATGAATCTGCTATTAATACTGAGAGGATTGAAGTTGATAAGGAAACTATTGACTTGCTTGCTTCAATGGGTATGAGCGAATTACCTGGTGTTGTACTCAAAGAAGAGCAGACGGTGGCTATTGCTGGACCTGTTGGTGGATTTGGCGGTGGTCGTGGTGGGTTCGGCGGCGGACGTGGAGGTCGTGGTGGTTACTGAGATCGGTTTGTTCGTTTTTTTTTTGGTTATGAGAAGTTATTTTTGCTGAATTGTAGACTTGATTTTATCTGATTATTGTTTAAATTTGGGATTTTGTGAACTAATTTAGTATTTTTGAATCTCTGAGTAATGTGCATTTCTCTCTATGAATTGAATATTGCATTTTTAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E289395" ref_strand="+" ref_description="SGN-E289395 [cLET-3-I3]">
      <seq>cgccgtcccggtaagtagcaatgggtcgtgtccgtacaaaaacagtgaagaaatcttcacgtcaagtgattgagcgttactactcaaaaatgactttagatttccacacaaacaagaagattctcgaagaagttgctatcatcccatcgaagcgtctccgcaacaagatcgctggattctctactcatctgatgaagcgaatccaaaaaggtccggttagaggcatttctcttaagctacaagaggaagagagagaacgccgtatggacttcgttcctgatgaatctgctattaatactgagaggattgaagttgataaggaaactattgacttgcttgcttcaatgggtatgagcgaattacctggtgttgtactcaaagaagagcagacggtggctattgctggacctgttggtggatttggcggtggtcgtggtgggttcggcggcggacgtggaggtcgtggtggttactgagatcggtttgttcgttttttttttggttatgagaagttatttttgctgaattgtagacttgattttatctgattattgtttaaatttgggattttgtgaactaatttagtatttttgaatctctgagtaatgtgcatttctctctatgaattgaatatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0101H16.1" temp_strand="-" temp_description="C02SLe0101H16.1  AC215444.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0101H16 sequenced_by:kribb upload_account_name:korea">
        <position start="50416" stop="49182"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="50116" g_stop="49482" g_length="635"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="635" r_length="635" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0101H16.1" gen_strand="-" ref_id="SGN-E289395" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>635</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0101H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E289395" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="50116" e_stop="49482"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGCCGTCCCGGTAAGTAGCAATGGGTCGTGTCCGTACAAAAACAGTGAAGAAATCTTCACGTCAAGTGATTGAGCGTTACTACTCAAAAATGACTTTAGATTTCCACACAAACAAGAAGATTCTCGAAGAAGTTGCTATCATCCCATCGAAGCGTCTCCGCAACAAGATCGCTGGATTCTCTACTCATCTGATGAAGCGAATCCAAAAAGGTCCGGTTAGAGGCATTTCTCTTAAGCTACAAGAGGAAGAGAGAGAACGCCGTATGGACTTCGTTCCTGATGAATCTGCTATTAATACTGAGAGGATTGAAGTTGATAAGGAAACTATTGACTTGCTTGCTTCAATGGGTATGAGCGAATTACCTGGTGTTGTACTCAAAGAAGAGCAGACGGTGGCTATTGCTGGACCTGTTGGTGGATTTGGCGGTGGTCGTGGTGGGTTCGGCGGCGGACGTGGAGGTCGTGGTGGTTACTGAGATCGGTTTGTTCGTTTTTTTTTTGGTTATGAGAAGTTATTTTTGCTGAATTGTAGACTTGATTTTATCTGATTATTGTTTAAATTTGGGATTTTGTGAACTAATTTAGTATTTTTGAATCTCTGAGTAATGTGCATTTCTCTCTATGAATTGAATATT</genome_strand>
        <mrna_strand>CGCCGTCCCGGTAAGTAGCAATGGGTCGTGTCCGTACAAAAACAGTGAAGAAATCTTCACGTCAAGTGATTGAGCGTTACTACTCAAAAATGACTTTAGATTTCCACACAAACAAGAAGATTCTCGAAGAAGTTGCTATCATCCCATCGAAGCGTCTCCGCAACAAGATCGCTGGATTCTCTACTCATCTGATGAAGCGAATCCAAAAAGGTCCGGTTAGAGGCATTTCTCTTAAGCTACAAGAGGAAGAGAGAGAACGCCGTATGGACTTCGTTCCTGATGAATCTGCTATTAATACTGAGAGGATTGAAGTTGATAAGGAAACTATTGACTTGCTTGCTTCAATGGGTATGAGCGAATTACCTGGTGTTGTACTCAAAGAAGAGCAGACGGTGGCTATTGCTGGACCTGTTGGTGGATTTGGCGGTGGTCGTGGTGGGTTCGGCGGCGGACGTGGAGGTCGTGGTGGTTACTGAGATCGGTTTGTTCGTTTTTTTTTTGGTTATGAGAAGTTATTTTTGCTGAATTGTAGACTTGATTTTATCTGATTATTGTTTAAATTTGGGATTTTGTGAACTAATTTAGTATTTTTGAATCTCTGAGTAATGTGCATTTCTCTCTATGAATTGAATATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E723804" ref_strand="+" ref_description="SGN-E723804 [FC22AA04]">
      <seq>gaaaccccccgcccctccccttaaggcccggtaagtagcaatgggacgtgtccgtacaacaacagtgaagaaatcttcacgtcaagtgattgagcgttactactcaaaaatgactttagatttccacacaaacaagaagattctcgaagaagttgctatcatcccatcgaagcgtctccgcaacaagatcgctggattctctactcatctgatgaagcgaatccaaaaaggtccggttagaggcatttctcttaagctacaagaggaaaagagagaacgccgtatggacttcgttcctgatgaatctgctattaatactgagaggattgaagttgataaggaaactattgacttgcttgcttcaatgggtatgagcgaattacctggtgttgtactcaaagaaaagcaaacggtggctattgctggacctgttggtggatttggcggtggtcgtggtgggttcggcggcggacgtgaaggtcgtggtggttactgaaatcggtttgttcgttttttttttggttatgaaaagttattttggcggaattgtaaacttgattttatctgataatggtttaaatttgggattttgtgaaccaatttatatatttttgaatctctgaataatgcgcatttctctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0101H16.1" temp_strand="-" temp_description="C02SLe0101H16.1  AC215444.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0101H16 sequenced_by:kribb upload_account_name:korea">
        <position start="50412" stop="49197"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="50136" g_stop="49497" g_length="640"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="641" r_length="641" r_score="0.956"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0101H16.1" gen_strand="-" ref_id="SGN-E723804" ref_strand="+">
        <total_alignment_score>0.956</total_alignment_score>
        <cumulative_length_of_scored_exons>640</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0101H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E723804" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="50136" e_stop="49497"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGAACCCCCCGCCCCTTCGCCGCCGTCCCGGTAAGTAGCAATGGGTCGTGTCCGTACAAAAACAGTGAAGAAATCTTCACGTCAAGTGATTGAGCGTTACTACTCAAAAATGACTTTAGATTTCCACACAAACAAGAAGATTCTCGAAGAAGTTGCTATCATCCCATCGAAGCGTCTCCGCAACAAGATCGCTGGATTCTCTACTCATCTGATGAAGCGAATCCAAAAAGGTCCGGTTAGAGGCATTTCTCTTAAGCTACAAGAGGAAGAGAGAGAACGCCGTATGGACTTCGTTCCTGATGAATCTGCTATTAATACTGAGAGGATTGAAGTTGATAAGGAAACTATTGACTTGCTTGCTTCAATGGGTATGAGCGAATTACCTGGTGTTGTACTCAAAGAAGAGCAGACGGTGGCTATTGCTGGACCTGTTGGTGGATTTGGCGGTGGTCGTGGTGGGTTCGGCGGCGGACGTGGAGGTCGTGGTGGTTACTGAGATCGGTTTGTTCGTTTTTTTTTTGGTTATGAGAAGTTATTTTTGCTGAATTGTAGACTTGATTTTATCTGATTATTGTTTAAATTTGGGATTTTGTGAACTAATTTA-GTATTTTTGAATCTCTGAGTAATGTGCATTTCTCTC</genome_strand>
        <mrna_strand>GAAACCCCCCGCCCCTCCCCTTAAGGCCCGGTAAGTAGCAATGGGACGTGTCCGTACAACAACAGTGAAGAAATCTTCACGTCAAGTGATTGAGCGTTACTACTCAAAAATGACTTTAGATTTCCACACAAACAAGAAGATTCTCGAAGAAGTTGCTATCATCCCATCGAAGCGTCTCCGCAACAAGATCGCTGGATTCTCTACTCATCTGATGAAGCGAATCCAAAAAGGTCCGGTTAGAGGCATTTCTCTTAAGCTACAAGAGGAAAAGAGAGAACGCCGTATGGACTTCGTTCCTGATGAATCTGCTATTAATACTGAGAGGATTGAAGTTGATAAGGAAACTATTGACTTGCTTGCTTCAATGGGTATGAGCGAATTACCTGGTGTTGTACTCAAAGAAAAGCAAACGGTGGCTATTGCTGGACCTGTTGGTGGATTTGGCGGTGGTCGTGGTGGGTTCGGCGGCGGACGTGAAGGTCGTGGTGGTTACTGAAATCGGTTTGTTCGTTTTTTTTTTGGTTATGAAAAGTTATTTTGGCGGAATTGTAAACTTGATTTTATCTGATAATGGTTTAAATTTGGGATTTTGTGAACCAATTTATATATTTTTGAATCTCTGAATAATGCGCATTTCTCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E734571" ref_strand="+" ref_description="SGN-E734571 [LB13AB01]">
      <seq>ccttcgccgccgtcccggtaagtagcaatgggtcgtgtccgtacaaaaacagtgaagaaatcttcacgtcaagtgattgagcgttactactcaaaaatgactttagatttccacacaaacaagaagattctcgaagaagttgctatcatcccatcgaagcgtctccgcaacaagatcgctggattctctactcatctgatgaagcgaatccaaaaaggtccggttagaggcatttctcttaagctacaagaggaagagagagaacgccgtatggacttcgttcctgatgaatctgctattaatactgagaggattgaagttgataaggaaactattgacttgcttgcttcaatgggtatgagcgaattacctggtgttgtactcaaagaagagcagacggtggctattgctggacctgttggtggatttggcggtggtcgtggtgggttcggcggcggacgtggaggtcgtggtggttactgagatcggtttgttcgttttttttttggttatgagaagttatttttgctgaattgtagacttgattttatctgattattgtttaaatttgggattttgtgaactaatttagtatttttgaatctctgagtaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0101H16.1" temp_strand="-" temp_description="C02SLe0101H16.1  AC215444.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0101H16 sequenced_by:kribb upload_account_name:korea">
        <position start="50423" stop="49211"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="50123" g_stop="49512" g_length="612"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="612" r_length="612" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="613" polyA_stop="625"/>
      <MATCH_line gen_id="C02SLe0101H16.1" gen_strand="-" ref_id="SGN-E734571" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>612</cumulative_length_of_scored_exons>
        <coverage percentage="0.979" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0101H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E734571" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="50123" e_stop="49512"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTTCGCCGCCGTCCCGGTAAGTAGCAATGGGTCGTGTCCGTACAAAAACAGTGAAGAAATCTTCACGTCAAGTGATTGAGCGTTACTACTCAAAAATGACTTTAGATTTCCACACAAACAAGAAGATTCTCGAAGAAGTTGCTATCATCCCATCGAAGCGTCTCCGCAACAAGATCGCTGGATTCTCTACTCATCTGATGAAGCGAATCCAAAAAGGTCCGGTTAGAGGCATTTCTCTTAAGCTACAAGAGGAAGAGAGAGAACGCCGTATGGACTTCGTTCCTGATGAATCTGCTATTAATACTGAGAGGATTGAAGTTGATAAGGAAACTATTGACTTGCTTGCTTCAATGGGTATGAGCGAATTACCTGGTGTTGTACTCAAAGAAGAGCAGACGGTGGCTATTGCTGGACCTGTTGGTGGATTTGGCGGTGGTCGTGGTGGGTTCGGCGGCGGACGTGGAGGTCGTGGTGGTTACTGAGATCGGTTTGTTCGTTTTTTTTTTGGTTATGAGAAGTTATTTTTGCTGAATTGTAGACTTGATTTTATCTGATTATTGTTTAAATTTGGGATTTTGTGAACTAATTTAGTATTTTTGAATCTCTGAGTA</genome_strand>
        <mrna_strand>CCTTCGCCGCCGTCCCGGTAAGTAGCAATGGGTCGTGTCCGTACAAAAACAGTGAAGAAATCTTCACGTCAAGTGATTGAGCGTTACTACTCAAAAATGACTTTAGATTTCCACACAAACAAGAAGATTCTCGAAGAAGTTGCTATCATCCCATCGAAGCGTCTCCGCAACAAGATCGCTGGATTCTCTACTCATCTGATGAAGCGAATCCAAAAAGGTCCGGTTAGAGGCATTTCTCTTAAGCTACAAGAGGAAGAGAGAGAACGCCGTATGGACTTCGTTCCTGATGAATCTGCTATTAATACTGAGAGGATTGAAGTTGATAAGGAAACTATTGACTTGCTTGCTTCAATGGGTATGAGCGAATTACCTGGTGTTGTACTCAAAGAAGAGCAGACGGTGGCTATTGCTGGACCTGTTGGTGGATTTGGCGGTGGTCGTGGTGGGTTCGGCGGCGGACGTGGAGGTCGTGGTGGTTACTGAGATCGGTTTGTTCGTTTTTTTTTTGGTTATGAGAAGTTATTTTTGCTGAATTGTAGACTTGATTTTATCTGATTATTGTTTAAATTTGGGATTTTGTGAACTAATTTAGTATTTTTGAATCTCTGAGTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E301946" ref_strand="+" ref_description="SGN-E301946 [cLEX-3-I12]">
      <seq>tcatcccatcgaagcgtctccgcaacaagatcgctggattctctactcatctgatgaagcgaatccaaaaaggtccggttagaggcatttctcttaagctacaagaggaagagagagaacgccgtatggacttcgttcctgatgaatctgctattaatactgagaggattgaagttgataaggaaactattgacttgcttgcttcaatgggtatgagcgaattacctggtgttgtactcaaagaagagcagacggtggctattgctggacctgttggtggatttggcggtggtcgtggtgggttcggcggcggacgtggaggtcgtggtggttactgagatcggtttgttcgttttttttttggttatgagaagttatttttgctgaattgtagacttgattttatctgattattgtttaaatttgggattttgtgaactaatttagtatttttgaatctctgaaaaanaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0101H16.1" temp_strand="-" temp_description="C02SLe0101H16.1  AC215444.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0101H16 sequenced_by:kribb upload_account_name:korea">
        <position start="50278" stop="49211"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="49978" g_stop="49515" g_length="464"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="464" r_length="464" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0101H16.1" gen_strand="-" ref_id="SGN-E301946" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>464</cumulative_length_of_scored_exons>
        <coverage percentage="0.981" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0101H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E301946" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="49978" e_stop="49515"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCATCCCATCGAAGCGTCTCCGCAACAAGATCGCTGGATTCTCTACTCATCTGATGAAGCGAATCCAAAAAGGTCCGGTTAGAGGCATTTCTCTTAAGCTACAAGAGGAAGAGAGAGAACGCCGTATGGACTTCGTTCCTGATGAATCTGCTATTAATACTGAGAGGATTGAAGTTGATAAGGAAACTATTGACTTGCTTGCTTCAATGGGTATGAGCGAATTACCTGGTGTTGTACTCAAAGAAGAGCAGACGGTGGCTATTGCTGGACCTGTTGGTGGATTTGGCGGTGGTCGTGGTGGGTTCGGCGGCGGACGTGGAGGTCGTGGTGGTTACTGAGATCGGTTTGTTCGTTTTTTTTTTGGTTATGAGAAGTTATTTTTGCTGAATTGTAGACTTGATTTTATCTGATTATTGTTTAAATTTGGGATTTTGTGAACTAATTTAGTATTTTTGAATCTCTGA</genome_strand>
        <mrna_strand>TCATCCCATCGAAGCGTCTCCGCAACAAGATCGCTGGATTCTCTACTCATCTGATGAAGCGAATCCAAAAAGGTCCGGTTAGAGGCATTTCTCTTAAGCTACAAGAGGAAGAGAGAGAACGCCGTATGGACTTCGTTCCTGATGAATCTGCTATTAATACTGAGAGGATTGAAGTTGATAAGGAAACTATTGACTTGCTTGCTTCAATGGGTATGAGCGAATTACCTGGTGTTGTACTCAAAGAAGAGCAGACGGTGGCTATTGCTGGACCTGTTGGTGGATTTGGCGGTGGTCGTGGTGGGTTCGGCGGCGGACGTGGAGGTCGTGGTGGTTACTGAGATCGGTTTGTTCGTTTTTTTTTTGGTTATGAGAAGTTATTTTTGCTGAATTGTAGACTTGATTTTATCTGATTATTGTTTAAATTTGGGATTTTGTGAACTAATTTAGTATTTTTGAATCTCTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E301977" ref_strand="+" ref_description="SGN-E301977 [cLEX-3-J22]">
      <seq>tcatcccatcgaagcgtctccgcaacaagatcgctggattctctactcatctgatgaagcgaatccaaaaaggtccggttagaggcatttctcttaagctacaagaggaagagagagaacgccgtatggacttcgttcctgatgaatctgctattaatactgagaggattgaagttgataaggaaactattgacttgcttgcttcaatgggtatgagcgaattacctggtgttgtactcaaagaagagcagacggtggctattgctggacctgttggtggatttggcggtggtcgtggtgggttcggcggcggacgtggaggtcgtggtggttactgagatcggtttgttcgttttttttttggttatgagaagttatttttgctgaattgtagacttgattttatctgattattgtttaaatttgggattttgtgaactaatttagtatttttgaatctctgaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0101H16.1" temp_strand="-" temp_description="C02SLe0101H16.1  AC215444.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0101H16 sequenced_by:kribb upload_account_name:korea">
        <position start="50278" stop="49211"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="49978" g_stop="49515" g_length="464"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="464" r_length="464" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0101H16.1" gen_strand="-" ref_id="SGN-E301977" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>464</cumulative_length_of_scored_exons>
        <coverage percentage="0.981" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0101H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E301977" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="49978" e_stop="49515"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCATCCCATCGAAGCGTCTCCGCAACAAGATCGCTGGATTCTCTACTCATCTGATGAAGCGAATCCAAAAAGGTCCGGTTAGAGGCATTTCTCTTAAGCTACAAGAGGAAGAGAGAGAACGCCGTATGGACTTCGTTCCTGATGAATCTGCTATTAATACTGAGAGGATTGAAGTTGATAAGGAAACTATTGACTTGCTTGCTTCAATGGGTATGAGCGAATTACCTGGTGTTGTACTCAAAGAAGAGCAGACGGTGGCTATTGCTGGACCTGTTGGTGGATTTGGCGGTGGTCGTGGTGGGTTCGGCGGCGGACGTGGAGGTCGTGGTGGTTACTGAGATCGGTTTGTTCGTTTTTTTTTTGGTTATGAGAAGTTATTTTTGCTGAATTGTAGACTTGATTTTATCTGATTATTGTTTAAATTTGGGATTTTGTGAACTAATTTAGTATTTTTGAATCTCTGA</genome_strand>
        <mrna_strand>TCATCCCATCGAAGCGTCTCCGCAACAAGATCGCTGGATTCTCTACTCATCTGATGAAGCGAATCCAAAAAGGTCCGGTTAGAGGCATTTCTCTTAAGCTACAAGAGGAAGAGAGAGAACGCCGTATGGACTTCGTTCCTGATGAATCTGCTATTAATACTGAGAGGATTGAAGTTGATAAGGAAACTATTGACTTGCTTGCTTCAATGGGTATGAGCGAATTACCTGGTGTTGTACTCAAAGAAGAGCAGACGGTGGCTATTGCTGGACCTGTTGGTGGATTTGGCGGTGGTCGTGGTGGGTTCGGCGGCGGACGTGGAGGTCGTGGTGGTTACTGAGATCGGTTTGTTCGTTTTTTTTTTGGTTATGAGAAGTTATTTTTGCTGAATTGTAGACTTGATTTTATCTGATTATTGTTTAAATTTGGGATTTTGTGAACTAATTTAGTATTTTTGAATCTCTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E348343" ref_strand="+" ref_description="SGN-E348343 [cTOF-27-N12]">
      <seq>tagcaatgggtcgtgtccgtacaaaaaaccgtgaagaaatcttcacgtcaagtgattgagcgttactactcaaaaatgactttagatttccacacaaacaagaagattctcgaagaagttgctatcatcccatcgaagcgtctccgcaacaagatcgctggattctctactcatctgatgaagcgaatccaaaaaggtccggttagaggcatttctcttaagctacaagaggaagagagagaacgccgtatggacttcgttcctgatgaatctgctattaatactgagaggattgaagttgataaggaaactattgacttgcttgcttcaatgggtatgagcgaattacctggtgttgtactcaaagaagagcagacggtggctattgctggacctgttggtggatttggcggtggtcgtggtgggttcggcggcggacgtggaggtcgtggtggttactgagatcggtttgttcgttttttttttggttatgagaagttatttttgctgaattgtagacttgattttatctgattattgtttaaatttgggattttgtgaactaatttagtatttttgaatctctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0101H16.1" temp_strand="-" temp_description="C02SLe0101H16.1  AC215444.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0101H16 sequenced_by:kribb upload_account_name:korea">
        <position start="50401" stop="49216"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="50101" g_stop="49516" g_length="586"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="587" r_length="587" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0101H16.1" gen_strand="-" ref_id="SGN-E348343" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>586</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0101H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E348343" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="50101" e_stop="49516"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGCAATGGGTCGTGTCCGTAC-AAAAACAGTGAAGAAATCTTCACGTCAAGTGATTGAGCGTTACTACTCAAAAATGACTTTAGATTTCCACACAAACAAGAAGATTCTCGAAGAAGTTGCTATCATCCCATCGAAGCGTCTCCGCAACAAGATCGCTGGATTCTCTACTCATCTGATGAAGCGAATCCAAAAAGGTCCGGTTAGAGGCATTTCTCTTAAGCTACAAGAGGAAGAGAGAGAACGCCGTATGGACTTCGTTCCTGATGAATCTGCTATTAATACTGAGAGGATTGAAGTTGATAAGGAAACTATTGACTTGCTTGCTTCAATGGGTATGAGCGAATTACCTGGTGTTGTACTCAAAGAAGAGCAGACGGTGGCTATTGCTGGACCTGTTGGTGGATTTGGCGGTGGTCGTGGTGGGTTCGGCGGCGGACGTGGAGGTCGTGGTGGTTACTGAGATCGGTTTGTTCGTTTTTTTTTTGGTTATGAGAAGTTATTTTTGCTGAATTGTAGACTTGATTTTATCTGATTATTGTTTAAATTTGGGATTTTGTGAACTAATTTAGTATTTTTGAATCTCTG</genome_strand>
        <mrna_strand>TAGCAATGGGTCGTGTCCGTACAAAAAACCGTGAAGAAATCTTCACGTCAAGTGATTGAGCGTTACTACTCAAAAATGACTTTAGATTTCCACACAAACAAGAAGATTCTCGAAGAAGTTGCTATCATCCCATCGAAGCGTCTCCGCAACAAGATCGCTGGATTCTCTACTCATCTGATGAAGCGAATCCAAAAAGGTCCGGTTAGAGGCATTTCTCTTAAGCTACAAGAGGAAGAGAGAGAACGCCGTATGGACTTCGTTCCTGATGAATCTGCTATTAATACTGAGAGGATTGAAGTTGATAAGGAAACTATTGACTTGCTTGCTTCAATGGGTATGAGCGAATTACCTGGTGTTGTACTCAAAGAAGAGCAGACGGTGGCTATTGCTGGACCTGTTGGTGGATTTGGCGGTGGTCGTGGTGGGTTCGGCGGCGGACGTGGAGGTCGTGGTGGTTACTGAGATCGGTTTGTTCGTTTTTTTTTTGGTTATGAGAAGTTATTTTTGCTGAATTGTAGACTTGATTTTATCTGATTATTGTTTAAATTTGGGATTTTGTGAACTAATTTAGTATTTTTGAATCTCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E370505" ref_strand="+" ref_description="SGN-E370505 [TUS-29-I15](-)">
      <seq>ctcgaaccccccgccccttcgccgccgtcccggtaagtagcaatgggtcgtgtccgtacaaaaacagtgaagaaatcttcacgtcaagtgattgagcgttactactcaaaaatgactttagatttccacacaaacaagaagattctcgaagaagttgctatcatcccatcgaagcgtctccgcaacaagatcgctggattctctactcatctgatgaagcgaatccaaaaaggtccggttagaggcatttctcttaagctacaagaggaagagagagaacgccgtatggacttcgttcctgatgaatctgctattaatactgagaggattgaagttgataaggaaactattgacttgcttgcttcaatgggtatgagcgaattacctggtgttgtactcaaagaagagcagacggtggctattgctggacctgttggtggatttggcggtggtcgtggtgggttcggcggcggacgtggaggtcgtggtggttactgagatcggtttgttcgttttttttttggttatgagaagttatttttgctgaattgtagacttgattttatctgattattgtttaaatttgggattttgtgaactaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0101H16.1" temp_strand="-" temp_description="C02SLe0101H16.1  AC215444.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0101H16 sequenced_by:kribb upload_account_name:korea">
        <position start="50438" stop="49237"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="50138" g_stop="49530" g_length="609"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="609" r_length="609" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0101H16.1" gen_strand="-" ref_id="SGN-E370505" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>609</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0101H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E370505" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="50138" e_stop="49530"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCGAACCCCCCGCCCCTTCGCCGCCGTCCCGGTAAGTAGCAATGGGTCGTGTCCGTACAAAAACAGTGAAGAAATCTTCACGTCAAGTGATTGAGCGTTACTACTCAAAAATGACTTTAGATTTCCACACAAACAAGAAGATTCTCGAAGAAGTTGCTATCATCCCATCGAAGCGTCTCCGCAACAAGATCGCTGGATTCTCTACTCATCTGATGAAGCGAATCCAAAAAGGTCCGGTTAGAGGCATTTCTCTTAAGCTACAAGAGGAAGAGAGAGAACGCCGTATGGACTTCGTTCCTGATGAATCTGCTATTAATACTGAGAGGATTGAAGTTGATAAGGAAACTATTGACTTGCTTGCTTCAATGGGTATGAGCGAATTACCTGGTGTTGTACTCAAAGAAGAGCAGACGGTGGCTATTGCTGGACCTGTTGGTGGATTTGGCGGTGGTCGTGGTGGGTTCGGCGGCGGACGTGGAGGTCGTGGTGGTTACTGAGATCGGTTTGTTCGTTTTTTTTTTGGTTATGAGAAGTTATTTTTGCTGAATTGTAGACTTGATTTTATCTGATTATTGTTTAAATTTGGGATTTTGTGAACTAATTTAGTA</genome_strand>
        <mrna_strand>CTCGAACCCCCCGCCCCTTCGCCGCCGTCCCGGTAAGTAGCAATGGGTCGTGTCCGTACAAAAACAGTGAAGAAATCTTCACGTCAAGTGATTGAGCGTTACTACTCAAAAATGACTTTAGATTTCCACACAAACAAGAAGATTCTCGAAGAAGTTGCTATCATCCCATCGAAGCGTCTCCGCAACAAGATCGCTGGATTCTCTACTCATCTGATGAAGCGAATCCAAAAAGGTCCGGTTAGAGGCATTTCTCTTAAGCTACAAGAGGAAGAGAGAGAACGCCGTATGGACTTCGTTCCTGATGAATCTGCTATTAATACTGAGAGGATTGAAGTTGATAAGGAAACTATTGACTTGCTTGCTTCAATGGGTATGAGCGAATTACCTGGTGTTGTACTCAAAGAAGAGCAGACGGTGGCTATTGCTGGACCTGTTGGTGGATTTGGCGGTGGTCGTGGTGGGTTCGGCGGCGGACGTGGAGGTCGTGGTGGTTACTGAGATCGGTTTGTTCGTTTTTTTTTTGGTTATGAGAAGTTATTTTTGCTGAATTGTAGACTTGATTTTATCTGATTATTGTTTAAATTTGGGATTTTGTGAACTAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E311643" ref_strand="+" ref_description="SGN-E311643 [cLEZ-9-M16]">
      <seq>tcgtgtccgtacaaaaacagtgaagaaatcttcacgtcaagtgattgagcgttactactcaaaaatgactttagatttccacacaaacaagaagattctcgaagaagttgctatcatcccatcgaagcgtctccgcaacaagatcgctggattctctactcatctgatgaagcgaatccaaaaaggtccggttagaggcatttctcttaagctacaagaggaagagagagaacgccgtatggacttcgttcctgatgaatctgctattaatactgagaggattgaagttgataaggaaactattgacttgcttgcttcaatgggtatgagcgaattacctggtgttgtactcaaagaagagcagacggtggctattgctggacctgttggtggatttggcggtggtcgtggtgggttcggcggcggacgtggaggtcgtggtggttactgagatcggtttgttcgttttttttttggttatgagaagttatttttgctgaattgtagacttgattttatctgattattgtttaaatttgggattttgtgaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0101H16.1" temp_strand="-" temp_description="C02SLe0101H16.1  AC215444.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0101H16 sequenced_by:kribb upload_account_name:korea">
        <position start="50391" stop="49237"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="50091" g_stop="49530" g_length="562"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="562" r_length="562" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0101H16.1" gen_strand="-" ref_id="SGN-E311643" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>562</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0101H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E311643" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="50091" e_stop="49530"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGTGTCCGTACAAAAACAGTGAAGAAATCTTCACGTCAAGTGATTGAGCGTTACTACTCAAAAATGACTTTAGATTTCCACACAAACAAGAAGATTCTCGAAGAAGTTGCTATCATCCCATCGAAGCGTCTCCGCAACAAGATCGCTGGATTCTCTACTCATCTGATGAAGCGAATCCAAAAAGGTCCGGTTAGAGGCATTTCTCTTAAGCTACAAGAGGAAGAGAGAGAACGCCGTATGGACTTCGTTCCTGATGAATCTGCTATTAATACTGAGAGGATTGAAGTTGATAAGGAAACTATTGACTTGCTTGCTTCAATGGGTATGAGCGAATTACCTGGTGTTGTACTCAAAGAAGAGCAGACGGTGGCTATTGCTGGACCTGTTGGTGGATTTGGCGGTGGTCGTGGTGGGTTCGGCGGCGGACGTGGAGGTCGTGGTGGTTACTGAGATCGGTTTGTTCGTTTTTTTTTTGGTTATGAGAAGTTATTTTTGCTGAATTGTAGACTTGATTTTATCTGATTATTGTTTAAATTTGGGATTTTGTGAACTAATTTAGTA</genome_strand>
        <mrna_strand>TCGTGTCCGTACAAAAACAGTGAAGAAATCTTCACGTCAAGTGATTGAGCGTTACTACTCAAAAATGACTTTAGATTTCCACACAAACAAGAAGATTCTCGAAGAAGTTGCTATCATCCCATCGAAGCGTCTCCGCAACAAGATCGCTGGATTCTCTACTCATCTGATGAAGCGAATCCAAAAAGGTCCGGTTAGAGGCATTTCTCTTAAGCTACAAGAGGAAGAGAGAGAACGCCGTATGGACTTCGTTCCTGATGAATCTGCTATTAATACTGAGAGGATTGAAGTTGATAAGGAAACTATTGACTTGCTTGCTTCAATGGGTATGAGCGAATTACCTGGTGTTGTACTCAAAGAAGAGCAGACGGTGGCTATTGCTGGACCTGTTGGTGGATTTGGCGGTGGTCGTGGTGGGTTCGGCGGCGGACGTGGAGGTCGTGGTGGTTACTGAGATCGGTTTGTTCGTTTTTTTTTTGGTTATGAGAAGTTATTTTTGCTGAATTGTAGACTTGATTTTATCTGATTATTGTTTAAATTTGGGATTTTGTGAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E734807" ref_strand="+" ref_description="SGN-E734807 [LB13CE12]">
      <seq>ccctacagagctcgaaccccccgccccttcgccgccgtcccggtaagtagcaatgggtcgtgtccgtacaaaaacagtgaagaaatcttcacgtcaagtgattgagcgttactactcaaaaatgactttagatttccacacaaacaagaagattctcgaagaagttgctatcatcccatcgaagcgtctccgcaacaagatcgctggattctctactcatctgatgaagcgaatccaaaaaggtccggttagaggcatttctcttaagctacaagaggaagagagagaacgccgtatggacttcgttcctgatgaatctgctattaatactgagaggattgaagttgataaggaaactattgacttgcttgcttcaatgggtatgagcgaattacctggtgttgtactcaaagaagagcagacggtggctattgctggacctgttggtggatttggcggtggtcgtggtgggttcggcggcggacgtggaggtcgtggtggttactgagatcggtttgttcgttttttttttggttatgagaagttatttttgctgaattgtagacttgattttatctgattattgtttaaatttgggattttgtgaaaaaaaacaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0101H16.1" temp_strand="-" temp_description="C02SLe0101H16.1  AC215444.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0101H16 sequenced_by:kribb upload_account_name:korea">
        <position start="50448" stop="49237"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="50148" g_stop="49541" g_length="608"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="608" r_length="608" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="609" polyA_stop="628"/>
      <MATCH_line gen_id="C02SLe0101H16.1" gen_strand="-" ref_id="SGN-E734807" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>608</cumulative_length_of_scored_exons>
        <coverage percentage="0.968" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0101H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E734807" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="50148" e_stop="49541"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCCTACAGAGCTCGAACCCCCCGCCCCTTCGCCGCCGTCCCGGTAAGTAGCAATGGGTCGTGTCCGTACAAAAACAGTGAAGAAATCTTCACGTCAAGTGATTGAGCGTTACTACTCAAAAATGACTTTAGATTTCCACACAAACAAGAAGATTCTCGAAGAAGTTGCTATCATCCCATCGAAGCGTCTCCGCAACAAGATCGCTGGATTCTCTACTCATCTGATGAAGCGAATCCAAAAAGGTCCGGTTAGAGGCATTTCTCTTAAGCTACAAGAGGAAGAGAGAGAACGCCGTATGGACTTCGTTCCTGATGAATCTGCTATTAATACTGAGAGGATTGAAGTTGATAAGGAAACTATTGACTTGCTTGCTTCAATGGGTATGAGCGAATTACCTGGTGTTGTACTCAAAGAAGAGCAGACGGTGGCTATTGCTGGACCTGTTGGTGGATTTGGCGGTGGTCGTGGTGGGTTCGGCGGCGGACGTGGAGGTCGTGGTGGTTACTGAGATCGGTTTGTTCGTTTTTTTTTTGGTTATGAGAAGTTATTTTTGCTGAATTGTAGACTTGATTTTATCTGATTATTGTTTAAATTTGGGATTTTGTGAA</genome_strand>
        <mrna_strand>CCCTACAGAGCTCGAACCCCCCGCCCCTTCGCCGCCGTCCCGGTAAGTAGCAATGGGTCGTGTCCGTACAAAAACAGTGAAGAAATCTTCACGTCAAGTGATTGAGCGTTACTACTCAAAAATGACTTTAGATTTCCACACAAACAAGAAGATTCTCGAAGAAGTTGCTATCATCCCATCGAAGCGTCTCCGCAACAAGATCGCTGGATTCTCTACTCATCTGATGAAGCGAATCCAAAAAGGTCCGGTTAGAGGCATTTCTCTTAAGCTACAAGAGGAAGAGAGAGAACGCCGTATGGACTTCGTTCCTGATGAATCTGCTATTAATACTGAGAGGATTGAAGTTGATAAGGAAACTATTGACTTGCTTGCTTCAATGGGTATGAGCGAATTACCTGGTGTTGTACTCAAAGAAGAGCAGACGGTGGCTATTGCTGGACCTGTTGGTGGATTTGGCGGTGGTCGTGGTGGGTTCGGCGGCGGACGTGGAGGTCGTGGTGGTTACTGAGATCGGTTTGTTCGTTTTTTTTTTGGTTATGAGAAGTTATTTTTGCTGAATTGTAGACTTGATTTTATCTGATTATTGTTTAAATTTGGGATTTTGTGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E713078" ref_strand="+" ref_description="SGN-E713078 [FB06CF08]">
      <seq>caatgggtcgtgtccgtacaaaaacagtgaagaaatcttcacgtcaagtgattgagcgttactactcaaaaatgactttagatttccacacaaacaagaagattctcgaagaagttgctatcatcccatcgaagcgtctccgcaacaagatcgctggattctctactcatctgatgaagcgaatccaaaaaggtccggttagaggcatttctcttaagctacaagaggaagagagagaacgccgtatggacttcgttcctgatgaatctgctattaatactgagaggattgaagttgataaggaaactattgacttgcttgcttcaatgggtatgagcgaattacctggtgttgtactcaaagaagagcagacggtggctattgctggacctgttggtggatttggcggtggtcgtggtgggttcggcggcggacgtggaggtcgtggtggttactgagatcggtttgttcgttttttttttggttatgagaagttatttttgctgaattgtagacttgattttatctgattattgtttaaattaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0101H16.1" temp_strand="-" temp_description="C02SLe0101H16.1  AC215444.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0101H16 sequenced_by:kribb upload_account_name:korea">
        <position start="50398" stop="49255"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="50098" g_stop="49558" g_length="541"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="541" r_length="541" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="545" polyA_stop="555"/>
      <MATCH_line gen_id="C02SLe0101H16.1" gen_strand="-" ref_id="SGN-E713078" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>541</cumulative_length_of_scored_exons>
        <coverage percentage="0.975" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0101H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E713078" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="50098" e_stop="49558"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAATGGGTCGTGTCCGTACAAAAACAGTGAAGAAATCTTCACGTCAAGTGATTGAGCGTTACTACTCAAAAATGACTTTAGATTTCCACACAAACAAGAAGATTCTCGAAGAAGTTGCTATCATCCCATCGAAGCGTCTCCGCAACAAGATCGCTGGATTCTCTACTCATCTGATGAAGCGAATCCAAAAAGGTCCGGTTAGAGGCATTTCTCTTAAGCTACAAGAGGAAGAGAGAGAACGCCGTATGGACTTCGTTCCTGATGAATCTGCTATTAATACTGAGAGGATTGAAGTTGATAAGGAAACTATTGACTTGCTTGCTTCAATGGGTATGAGCGAATTACCTGGTGTTGTACTCAAAGAAGAGCAGACGGTGGCTATTGCTGGACCTGTTGGTGGATTTGGCGGTGGTCGTGGTGGGTTCGGCGGCGGACGTGGAGGTCGTGGTGGTTACTGAGATCGGTTTGTTCGTTTTTTTTTTGGTTATGAGAAGTTATTTTTGCTGAATTGTAGACTTGATTTTATCTGATTATTGTTTAA</genome_strand>
        <mrna_strand>CAATGGGTCGTGTCCGTACAAAAACAGTGAAGAAATCTTCACGTCAAGTGATTGAGCGTTACTACTCAAAAATGACTTTAGATTTCCACACAAACAAGAAGATTCTCGAAGAAGTTGCTATCATCCCATCGAAGCGTCTCCGCAACAAGATCGCTGGATTCTCTACTCATCTGATGAAGCGAATCCAAAAAGGTCCGGTTAGAGGCATTTCTCTTAAGCTACAAGAGGAAGAGAGAGAACGCCGTATGGACTTCGTTCCTGATGAATCTGCTATTAATACTGAGAGGATTGAAGTTGATAAGGAAACTATTGACTTGCTTGCTTCAATGGGTATGAGCGAATTACCTGGTGTTGTACTCAAAGAAGAGCAGACGGTGGCTATTGCTGGACCTGTTGGTGGATTTGGCGGTGGTCGTGGTGGGTTCGGCGGCGGACGTGGAGGTCGTGGTGGTTACTGAGATCGGTTTGTTCGTTTTTTTTTTGGTTATGAGAAGTTATTTTTGCTGAATTGTAGACTTGATTTTATCTGATTATTGTTTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E348318" ref_strand="+" ref_description="SGN-E348318 [cTOF-27-D10]">
      <seq>ttaagctacaagaggaagagagagaacgccgtatggacttcgttcctgatgaatctgctattaatactgagaggattgaagttgataaggaaactattgacttgcttgcttcaatgggtatgagcgaattacctggtgttgtactcaaagaagagcagacggtggctattgctggacctgttggtggatttggcggtggtcgtggtgggttcggcggcggacgtggaggtcgtggtggttactgagatcggtttgttcgttttttttttggttatgagaagttatttttgctgaattgtagaacttgattttatcctgatta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0101H16.1" temp_strand="-" temp_description="C02SLe0101H16.1  AC215444.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0101H16 sequenced_by:kribb upload_account_name:korea">
        <position start="50185" stop="49266"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="49885" g_stop="49566" g_length="320"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="322" r_length="322" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0101H16.1" gen_strand="-" ref_id="SGN-E348318" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>320</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0101H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E348318" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="49885" e_stop="49566"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTAAGCTACAAGAGGAAGAGAGAGAACGCCGTATGGACTTCGTTCCTGATGAATCTGCTATTAATACTGAGAGGATTGAAGTTGATAAGGAAACTATTGACTTGCTTGCTTCAATGGGTATGAGCGAATTACCTGGTGTTGTACTCAAAGAAGAGCAGACGGTGGCTATTGCTGGACCTGTTGGTGGATTTGGCGGTGGTCGTGGTGGGTTCGGCGGCGGACGTGGAGGTCGTGGTGGTTACTGAGATCGGTTTGTTCGTTTTTTTTTTGGTTATGAGAAGTTATTTTTGCTGAATTGTAG-ACTTGATTTTAT-CTGATTA</genome_strand>
        <mrna_strand>TTAAGCTACAAGAGGAAGAGAGAGAACGCCGTATGGACTTCGTTCCTGATGAATCTGCTATTAATACTGAGAGGATTGAAGTTGATAAGGAAACTATTGACTTGCTTGCTTCAATGGGTATGAGCGAATTACCTGGTGTTGTACTCAAAGAAGAGCAGACGGTGGCTATTGCTGGACCTGTTGGTGGATTTGGCGGTGGTCGTGGTGGGTTCGGCGGCGGACGTGGAGGTCGTGGTGGTTACTGAGATCGGTTTGTTCGTTTTTTTTTTGGTTATGAGAAGTTATTTTTGCTGAATTGTAGAACTTGATTTTATCCTGATTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E339787" ref_strand="+" ref_description="SGN-E339787 [cTOE-16-H24]">
      <seq>cctacagagctcgaaccccccgccccttcgccgccgtcccggtaagtagcaatgggtcgtgtccgtacaaaaacagtgaagaaatcttcacgtcaagtgattgagcgttactactcaaaaatgactttagatttccacacaaacaagaagattctcgaagaagttgctatcatcccatcgaagcgtctccgcaacaagatcgctggattctctactcatctgatgaagcgaatccaaaaaggtccggttagaggcatttctcttaagctacaagaggaagagagagaacgccgtatggacttcgttcctgatgaatctgctattaatactgagaggattgaagttgataaggaaactattgacttgcttgcttcaatgggtatgagcgaattacctggtgttgtactcaaagaagagcagacggtggctattgctggacctgttggtggatttggcggtggtcgtggtgggttcggcggcggacgtggaggtcgtggtggttactgagatcggtttgttcgttttttttttggttatgagaagttatttttgctgaattgtagacttgattttatctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0101H16.1" temp_strand="-" temp_description="C02SLe0101H16.1  AC215444.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0101H16 sequenced_by:kribb upload_account_name:korea">
        <position start="50447" stop="49270"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="50147" g_stop="49570" g_length="578"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="578" r_length="578" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0101H16.1" gen_strand="-" ref_id="SGN-E339787" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>578</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0101H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E339787" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="50147" e_stop="49570"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTACAGAGCTCGAACCCCCCGCCCCTTCGCCGCCGTCCCGGTAAGTAGCAATGGGTCGTGTCCGTACAAAAACAGTGAAGAAATCTTCACGTCAAGTGATTGAGCGTTACTACTCAAAAATGACTTTAGATTTCCACACAAACAAGAAGATTCTCGAAGAAGTTGCTATCATCCCATCGAAGCGTCTCCGCAACAAGATCGCTGGATTCTCTACTCATCTGATGAAGCGAATCCAAAAAGGTCCGGTTAGAGGCATTTCTCTTAAGCTACAAGAGGAAGAGAGAGAACGCCGTATGGACTTCGTTCCTGATGAATCTGCTATTAATACTGAGAGGATTGAAGTTGATAAGGAAACTATTGACTTGCTTGCTTCAATGGGTATGAGCGAATTACCTGGTGTTGTACTCAAAGAAGAGCAGACGGTGGCTATTGCTGGACCTGTTGGTGGATTTGGCGGTGGTCGTGGTGGGTTCGGCGGCGGACGTGGAGGTCGTGGTGGTTACTGAGATCGGTTTGTTCGTTTTTTTTTTGGTTATGAGAAGTTATTTTTGCTGAATTGTAGACTTGATTTTATCTG</genome_strand>
        <mrna_strand>CCTACAGAGCTCGAACCCCCCGCCCCTTCGCCGCCGTCCCGGTAAGTAGCAATGGGTCGTGTCCGTACAAAAACAGTGAAGAAATCTTCACGTCAAGTGATTGAGCGTTACTACTCAAAAATGACTTTAGATTTCCACACAAACAAGAAGATTCTCGAAGAAGTTGCTATCATCCCATCGAAGCGTCTCCGCAACAAGATCGCTGGATTCTCTACTCATCTGATGAAGCGAATCCAAAAAGGTCCGGTTAGAGGCATTTCTCTTAAGCTACAAGAGGAAGAGAGAGAACGCCGTATGGACTTCGTTCCTGATGAATCTGCTATTAATACTGAGAGGATTGAAGTTGATAAGGAAACTATTGACTTGCTTGCTTCAATGGGTATGAGCGAATTACCTGGTGTTGTACTCAAAGAAGAGCAGACGGTGGCTATTGCTGGACCTGTTGGTGGATTTGGCGGTGGTCGTGGTGGGTTCGGCGGCGGACGTGGAGGTCGTGGTGGTTACTGAGATCGGTTTGTTCGTTTTTTTTTTGGTTATGAGAAGTTATTTTTGCTGAATTGTAGACTTGATTTTATCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E280440" ref_strand="+" ref_description="SGN-E280440 [cLER-1-J20]">
      <seq>tcgaaccccccgccccttcgccgccgtcccggtaagtagcaatgggtcgtgtccgtacaaaaacagtgaagaaatcttcacgtcaagtgattgagcgttactactcaaaaatgactttagatttccacacaaacaagaagattctcgaagaagttgctatcatcccatcgaagcgtctccgcaacaagatcgctggattctctactcatctgatgaagcgaatccaaaaaggtccggttagaggcatttctcttaagctacaagaggaagagagagaacgccgtatggacttcgttcctgatgaatctgctattaatactgagaggattgaagttgataaggaaactattgacttgcttgcttcaatgggtatgagcgaattacctggtgttgtactcaaagaagagcagacggtggctattgctggacctgttggtggatttggcggtggtcgtggtgggttcggcggc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0101H16.1" temp_strand="-" temp_description="C02SLe0101H16.1  AC215444.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0101H16 sequenced_by:kribb upload_account_name:korea">
        <position start="50437" stop="49368"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="50137" g_stop="49668" g_length="470"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="470" r_length="470" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0101H16.1" gen_strand="-" ref_id="SGN-E280440" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>470</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0101H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E280440" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="50137" e_stop="49668"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGAACCCCCCGCCCCTTCGCCGCCGTCCCGGTAAGTAGCAATGGGTCGTGTCCGTACAAAAACAGTGAAGAAATCTTCACGTCAAGTGATTGAGCGTTACTACTCAAAAATGACTTTAGATTTCCACACAAACAAGAAGATTCTCGAAGAAGTTGCTATCATCCCATCGAAGCGTCTCCGCAACAAGATCGCTGGATTCTCTACTCATCTGATGAAGCGAATCCAAAAAGGTCCGGTTAGAGGCATTTCTCTTAAGCTACAAGAGGAAGAGAGAGAACGCCGTATGGACTTCGTTCCTGATGAATCTGCTATTAATACTGAGAGGATTGAAGTTGATAAGGAAACTATTGACTTGCTTGCTTCAATGGGTATGAGCGAATTACCTGGTGTTGTACTCAAAGAAGAGCAGACGGTGGCTATTGCTGGACCTGTTGGTGGATTTGGCGGTGGTCGTGGTGGGTTCGGCGGC</genome_strand>
        <mrna_strand>TCGAACCCCCCGCCCCTTCGCCGCCGTCCCGGTAAGTAGCAATGGGTCGTGTCCGTACAAAAACAGTGAAGAAATCTTCACGTCAAGTGATTGAGCGTTACTACTCAAAAATGACTTTAGATTTCCACACAAACAAGAAGATTCTCGAAGAAGTTGCTATCATCCCATCGAAGCGTCTCCGCAACAAGATCGCTGGATTCTCTACTCATCTGATGAAGCGAATCCAAAAAGGTCCGGTTAGAGGCATTTCTCTTAAGCTACAAGAGGAAGAGAGAGAACGCCGTATGGACTTCGTTCCTGATGAATCTGCTATTAATACTGAGAGGATTGAAGTTGATAAGGAAACTATTGACTTGCTTGCTTCAATGGGTATGAGCGAATTACCTGGTGTTGTACTCAAAGAAGAGCAGACGGTGGCTATTGCTGGACCTGTTGGTGGATTTGGCGGTGGTCGTGGTGGGTTCGGCGGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E238101" ref_strand="+" ref_description="SGN-E238101 [cLED-22-G24]">
      <seq>cccttcgccgccgtcccggtaagtagcaatgggtcgtgtccgtacaaaaacagtgaagaaatcttcacgtcaagtgattgagcgttactactcaaaaatgactttagatttccacacaaacaagaagattctcgaagaagttgctatcatcccatcgaagcgtctccgcaacaagatcgctggattctctactcatctgatgaagcgaatccaaaaaggtccggttagaggcatttctcttaagctacaagaggaagagagagaacgccgtatggacttcgttcctgatgaatctgctattaatactgagaggattgaagttgataaggaaactattgacttgcttgcttcaatgggtatgagcgaattacctggtgttgtactcaaagaagagcagacggtggctattgctggacctgttggtggatttggcggtggtcgtggtgggt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0101H16.1" temp_strand="-" temp_description="C02SLe0101H16.1  AC215444.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0101H16 sequenced_by:kribb upload_account_name:korea">
        <position start="50424" stop="49376"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="50124" g_stop="49676" g_length="449"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="449" r_length="449" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0101H16.1" gen_strand="-" ref_id="SGN-E238101" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>449</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0101H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E238101" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="50124" e_stop="49676"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCCTTCGCCGCCGTCCCGGTAAGTAGCAATGGGTCGTGTCCGTACAAAAACAGTGAAGAAATCTTCACGTCAAGTGATTGAGCGTTACTACTCAAAAATGACTTTAGATTTCCACACAAACAAGAAGATTCTCGAAGAAGTTGCTATCATCCCATCGAAGCGTCTCCGCAACAAGATCGCTGGATTCTCTACTCATCTGATGAAGCGAATCCAAAAAGGTCCGGTTAGAGGCATTTCTCTTAAGCTACAAGAGGAAGAGAGAGAACGCCGTATGGACTTCGTTCCTGATGAATCTGCTATTAATACTGAGAGGATTGAAGTTGATAAGGAAACTATTGACTTGCTTGCTTCAATGGGTATGAGCGAATTACCTGGTGTTGTACTCAAAGAAGAGCAGACGGTGGCTATTGCTGGACCTGTTGGTGGATTTGGCGGTGGTCGTGGTGGGT</genome_strand>
        <mrna_strand>CCCTTCGCCGCCGTCCCGGTAAGTAGCAATGGGTCGTGTCCGTACAAAAACAGTGAAGAAATCTTCACGTCAAGTGATTGAGCGTTACTACTCAAAAATGACTTTAGATTTCCACACAAACAAGAAGATTCTCGAAGAAGTTGCTATCATCCCATCGAAGCGTCTCCGCAACAAGATCGCTGGATTCTCTACTCATCTGATGAAGCGAATCCAAAAAGGTCCGGTTAGAGGCATTTCTCTTAAGCTACAAGAGGAAGAGAGAGAACGCCGTATGGACTTCGTTCCTGATGAATCTGCTATTAATACTGAGAGGATTGAAGTTGATAAGGAAACTATTGACTTGCTTGCTTCAATGGGTATGAGCGAATTACCTGGTGTTGTACTCAAAGAAGAGCAGACGGTGGCTATTGCTGGACCTGTTGGTGGATTTGGCGGTGGTCGTGGTGGGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E277789" ref_strand="+" ref_description="SGN-E277789 [cLEL-5-C13](-)">
      <seq>gtcaatagtttccttatcaacttccaatcctctcagtattaatagcagattcatcaggaacgaagtccatacggcgttctctctcttcctcttgtagcttaagagaaatgcctctaaccggacctttttggattcgcttcatcagatgagtagagaatccagcgatcttgttgcggagacgcttcgatgggatgatagcaacttcttcgagaatcttcttgtttgtgtggaaatctaaagtcatttttgagtagtaacgctcaatcacttgacgtgaagatttcttcactgtttttgtacggacacgacccattgctacttaccgggacggcggcgaaggggcgggctcgtgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0101H16.1" temp_strand="+" temp_description="C02SLe0101H16.1  AC215444.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0101H16 sequenced_by:kribb upload_account_name:korea">
        <position start="49485" stop="50429"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="49785" g_stop="50135" g_length="351"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="353" r_length="353" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0101H16.1" gen_strand="+" ref_id="SGN-E277789" ref_strand="+">
        <total_alignment_score>0.980</total_alignment_score>
        <cumulative_length_of_scored_exons>351</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0101H16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E277789" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="49785" e_stop="50135"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCAATAGTTTCCTTATCAACTT-CAATCCTCTCAGTATTAATAGCAGATTCATCAGGAACGAAGTCCATACGGCGTTCTCTCTCTTCCTCTTGTAGCTTAAGAGAAATGCCTCTAACCGGACCTTTTTGGATTCGCTTCATCAGATGAGTAGAGAATCCAGCGATCTTGTTGCGGAGACGCTTCGATGGGATGATAGCAACTTCTTCGAGAATCTTCTTGTTTGTGTGGAAATCTAAAGTCATTTTTGAGTAGTAACGCTCAATCACTTGACGTGAAGATTTCTTCACTGTTTTTGTACGGACACGACCCATTGCTACTTACCGGGACGGCGGCGAAGGGGCGGG-GGGTTC</genome_strand>
        <mrna_strand>GTCAATAGTTTCCTTATCAACTTCCAATCCTCTCAGTATTAATAGCAGATTCATCAGGAACGAAGTCCATACGGCGTTCTCTCTCTTCCTCTTGTAGCTTAAGAGAAATGCCTCTAACCGGACCTTTTTGGATTCGCTTCATCAGATGAGTAGAGAATCCAGCGATCTTGTTGCGGAGACGCTTCGATGGGATGATAGCAACTTCTTCGAGAATCTTCTTGTTTGTGTGGAAATCTAAAGTCATTTTTGAGTAGTAACGCTCAATCACTTGACGTGAAGATTTCTTCACTGTTTTTGTACGGACACGACCCATTGCTACTTACCGGGACGGCGGCGAAGGGGCGGGCTCGTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E730759" ref_strand="+" ref_description="SGN-E730759 [LA25AD10]">
      <seq>ccttttaacttcctctcttatttccaagaaaaattgttaaaaatgaatggctattcctctcctatagctcacacaagcagaagattagaagggaaagtagctattgtaacaggaggagctagtggatttggagaaagtacagtaagacttttcttacaaaatggtgcaaaagttgtaatagctgatgttcaagatgaaattggacaatctctttgcaatgatctcctcaattgtcctaaaaataaaaacaatgattttacatacatacattgtgatgtaacaaaggtctccgacgtcgaaaaccttatcgacgcaacaatttccaagtatggaaaactcgatatcatgttcaacaacgcaggaattccggggaatctcgatttcaacataattgacgcagataacgagaatttcaaaaaggtatttgacgttaacgtgtacggatcatttctcggtgcgaaatatgctgcccgggtcatgatcccagaaaagaaaggtgtcattctttttacgtctagtttggcctccgtttcctcgggtgaatcaccgcattcatacaccgcctcgaaacacgcggtggtgggactcatgaagaatttatgtgccgaattagggcaacacgggataagagtgaactgcgtctcgccgtgcgcggtggcgacaccgatgttagtgaaggcgatgggtgtcgataagagcgtcgtggacggaataatttgctcgtcggcgaatttaaaaggggtggctccgacggcagaggatgtggcggaggcggcgttgtatttggcaagtgatgagtctaagtttgtaagcggagttaacctagtgattgatggaggttatagtcctactaatatgagttacata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0101H16.1" temp_strand="-" temp_description="C02SLe0101H16.1  AC215444.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0101H16 sequenced_by:kribb upload_account_name:korea">
        <position start="55430" stop="52849"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="55131" g_stop="55049" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="83" r_length="83" r_score="0.964"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="55048" i_stop="54498" i_length="551">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="54497" g_stop="54220" g_length="278"/>
          <reference_exon_boundary r_type="cDNA" r_start="84" r_stop="361" r_length="278" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="54219" i_stop="53655" i_length="565">
            <donor d_prob="0.982" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="53654" g_stop="53149" g_length="506"/>
          <reference_exon_boundary r_type="cDNA" r_start="362" r_stop="867" r_length="506" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0101H16.1" gen_strand="-" ref_id="SGN-E730759" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>867</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0101H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E730759" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="55131" e_stop="55049"/>
          <exon e_start="54497" e_stop="54220"/>
          <exon e_start="53654" e_stop="53149"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTTAGAACTTCCTCTCTTATTTCCAAGAAAAATTGTTAAAAATGAATGGCTATTCCTCTCCTATAGCTCACACAAGCAGAAGGTAATAACCTTACTTTTATTTATTTTTTGTTTTTCGTGATATCCGATACTCATGTTAGAGTCCGACTAAATTTGTATTAGAAGTCAGGCTAAAGCGCTTCCTAACAAACATAACTCCTTACTCCTTATCAGGGGATTCGAACCCGAAATCTCTGATTAAAAATGAAGTAGTACTTATCACCCATACAATTTTTTTACTTAATTATGTCATTTATATCTTCATAGTTCAATATTTGCAACAATTTCTATGAGGTTTACACATATAAATTTAGGTCTATATGTGTTAAAAGTTATGAATTTAATTGAACTCATCTACGTACAATGTGTTAGATCTACTCTCATTCATTTTGATGTCATATTAATAATTTATGTATTATCTCATTTAAAAATTTAAGTTGTTATAAAATATCAATGGCGAATGCACAAGTATGAAATACGAGTTGGTGAAAATTCAGTATATTTTACTGTAAACTCAATTATTATCATATATTGACTTGAGATTGTTAAATTTTTTTTTTTTATAAATTTCAAATTCTGAATTCGGAAATGCAGATTAGAAGGGAAAGTAGCTATTGTAACAGGAGGAGCTAGTGGATTTGGAGAAAGTACAGTAAGACTTTTCTTACAAAATGGTGCAAAAGTTGTAATAGCTGATGTTCAAGATGAAATTGGACAATCTCTTTGCAATGATCTCCTCAATTGTCCTAAAAATAAAAACAATGATTTTACATACATACATTGTGATGTAACAAAGGTCTCCGACGTCGAAAACCTTATCGACGCAACAATTTCCAAGTATGGAAAACTCGATATCATGTTCAACAACGCAGGTAGGAATGTTAAATGAGCGGTTTAATTGATTTTATATAGGTTAAATTAAGCTATATGTAATTAATACATAGACAATGACCTCTAAAGGTTTCTTGAGTTGAATGAACAGAAAAAATAAGCTAAACAATGAGTCATAATCCAATCCGTCTAATTCATACCAAAATTAATACTCTTAGTCAAAATGGAGAAATTTTCACTAGTTATCCTTTTTTGGATGGTTGTTTTATAAATAACTTCTTCTTTTTTTATAACTTATGAAATTTTAGATTACGATCTAAAGATTTTTCGAATAAATCAGAAATTGTTAAATCTAGAAATTTGTTAGTTATTCAAATGTTAGACCATATATTATTAGCAAGAGAAACATATCAACATACATTTGAACCATTACTTAGAATATTAATTTTCTAAAGTGTTATATTTGCACACTTTTTTAAATAAAGACAACTCAAAATAATGGCCTAAAAAGGAAATATTCACTTGATAAATTGACCATCACAAGTTTAAATTTAGATCGACTTATATTTTTATGAGCTAATTTAATTTTGTCATTCTTAAATATAGGAATTCCGGGGAATCTCGATTTCAACATAATTGACGCAGATAACGAGAATTTCAAAAAGGTATTTGACGTTAACGTGTACGGATCATTTCTCGGTGCGAAATATGCTGCCCGGGTCATGATCCCAGAAAAGAAAGGTGTCATTCTTTTTACGTCTAGTTTGGCCTCCGTTTCCTCGGGTGAATCACCGCATTCATACACCGCCTCGAAACACGCGGTGGTGGGACTCACGAAGAATTTATGTGCCGAATTAGGGCAACACGGGATAAGAGTGAACTGCGTCTCGCCGTGCGCGGTGGCGACACCGATGTTAGTGAAGGCGATGGGTGTCGATAAGAGCGTCGTGGACGGAATAATTTGCTCGTCGGCGAATTTAAAAGGGGTGGCTCCGACGGCAGAGGATGTGGCGGAGGCGGCGTTGTATTTGGCAAGTGATGAGTCTAAGTTTGTAAGCGGAGTTAACCTAGTGATTGATGGAGGTTATAGTACTACTAATATGAGTTACATA</genome_strand>
        <mrna_strand>CCTTTTAACTTCCTCTCTTATTTCCAAGAAAAATTGTTAAAAATGAATGGCTATTCCTCTCCTATAGCTCACACAAGCAGAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTAGAAGGGAAAGTAGCTATTGTAACAGGAGGAGCTAGTGGATTTGGAGAAAGTACAGTAAGACTTTTCTTACAAAATGGTGCAAAAGTTGTAATAGCTGATGTTCAAGATGAAATTGGACAATCTCTTTGCAATGATCTCCTCAATTGTCCTAAAAATAAAAACAATGATTTTACATACATACATTGTGATGTAACAAAGGTCTCCGACGTCGAAAACCTTATCGACGCAACAATTTCCAAGTATGGAAAACTCGATATCATGTTCAACAACGCAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATTCCGGGGAATCTCGATTTCAACATAATTGACGCAGATAACGAGAATTTCAAAAAGGTATTTGACGTTAACGTGTACGGATCATTTCTCGGTGCGAAATATGCTGCCCGGGTCATGATCCCAGAAAAGAAAGGTGTCATTCTTTTTACGTCTAGTTTGGCCTCCGTTTCCTCGGGTGAATCACCGCATTCATACACCGCCTCGAAACACGCGGTGGTGGGACTCATGAAGAATTTATGTGCCGAATTAGGGCAACACGGGATAAGAGTGAACTGCGTCTCGCCGTGCGCGGTGGCGACACCGATGTTAGTGAAGGCGATGGGTGTCGATAAGAGCGTCGTGGACGGAATAATTTGCTCGTCGGCGAATTTAAAAGGGGTGGCTCCGACGGCAGAGGATGTGGCGGAGGCGGCGTTGTATTTGGCAAGTGATGAGTCTAAGTTTGTAAGCGGAGTTAACCTAGTGATTGATGGAGGTTATAGTCCTACTAATATGAGTTACATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E347075" ref_strand="+" ref_description="SGN-E347075 [cTOF-25-D4]">
      <seq>ttcctctcttatttccaagaaaaattgttaaaaatgaatggctattcctctcctatagctcacacaagcagaagattagaagggaaagtagctattgtaacaggaggagctagtggatttggagaaagtacagtaagacttttcttacaaaatggtgcaaaagttgtaatagctgatgttcaagatgaaattggacaatctctttgcaatgatctcctcaattgtcctaaaaataaaaacaatgattttacatacatacattgtgatgtaacaaaggtctccgacgtcgaaaaccttatcgacgcaacaatttccaagtatggaaaactcgatatcatgttcaacaacgcaggaattccggggaatctcgatttcaacataattgacgcagataacgagaatttcaaaaaggtatttgacgttaacgtgtacggatcatttctcggtgcgaaatatgctgcccgggtcatgatcccagaaaagaaaggtgtcattctttttacgtctagtttggcctccggttcctcgggtgaatcaccgcat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0101H16.1" temp_strand="-" temp_description="C02SLe0101H16.1  AC215444.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0101H16 sequenced_by:kribb upload_account_name:korea">
        <position start="55422" stop="53164"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="55122" g_stop="55049" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="74" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="55048" i_stop="54498" i_length="551">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="54497" g_stop="54220" g_length="278"/>
          <reference_exon_boundary r_type="cDNA" r_start="75" r_stop="352" r_length="278" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="54219" i_stop="53655" i_length="565">
            <donor d_prob="0.982" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="53654" g_stop="53464" g_length="191"/>
          <reference_exon_boundary r_type="cDNA" r_start="353" r_stop="543" r_length="191" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0101H16.1" gen_strand="-" ref_id="SGN-E347075" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>543</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0101H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E347075" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="55122" e_stop="55049"/>
          <exon e_start="54497" e_stop="54220"/>
          <exon e_start="53654" e_stop="53464"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCCTCTCTTATTTCCAAGAAAAATTGTTAAAAATGAATGGCTATTCCTCTCCTATAGCTCACACAAGCAGAAGGTAATAACCTTACTTTTATTTATTTTTTGTTTTTCGTGATATCCGATACTCATGTTAGAGTCCGACTAAATTTGTATTAGAAGTCAGGCTAAAGCGCTTCCTAACAAACATAACTCCTTACTCCTTATCAGGGGATTCGAACCCGAAATCTCTGATTAAAAATGAAGTAGTACTTATCACCCATACAATTTTTTTACTTAATTATGTCATTTATATCTTCATAGTTCAATATTTGCAACAATTTCTATGAGGTTTACACATATAAATTTAGGTCTATATGTGTTAAAAGTTATGAATTTAATTGAACTCATCTACGTACAATGTGTTAGATCTACTCTCATTCATTTTGATGTCATATTAATAATTTATGTATTATCTCATTTAAAAATTTAAGTTGTTATAAAATATCAATGGCGAATGCACAAGTATGAAATACGAGTTGGTGAAAATTCAGTATATTTTACTGTAAACTCAATTATTATCATATATTGACTTGAGATTGTTAAATTTTTTTTTTTTATAAATTTCAAATTCTGAATTCGGAAATGCAGATTAGAAGGGAAAGTAGCTATTGTAACAGGAGGAGCTAGTGGATTTGGAGAAAGTACAGTAAGACTTTTCTTACAAAATGGTGCAAAAGTTGTAATAGCTGATGTTCAAGATGAAATTGGACAATCTCTTTGCAATGATCTCCTCAATTGTCCTAAAAATAAAAACAATGATTTTACATACATACATTGTGATGTAACAAAGGTCTCCGACGTCGAAAACCTTATCGACGCAACAATTTCCAAGTATGGAAAACTCGATATCATGTTCAACAACGCAGGTAGGAATGTTAAATGAGCGGTTTAATTGATTTTATATAGGTTAAATTAAGCTATATGTAATTAATACATAGACAATGACCTCTAAAGGTTTCTTGAGTTGAATGAACAGAAAAAATAAGCTAAACAATGAGTCATAATCCAATCCGTCTAATTCATACCAAAATTAATACTCTTAGTCAAAATGGAGAAATTTTCACTAGTTATCCTTTTTTGGATGGTTGTTTTATAAATAACTTCTTCTTTTTTTATAACTTATGAAATTTTAGATTACGATCTAAAGATTTTTCGAATAAATCAGAAATTGTTAAATCTAGAAATTTGTTAGTTATTCAAATGTTAGACCATATATTATTAGCAAGAGAAACATATCAACATACATTTGAACCATTACTTAGAATATTAATTTTCTAAAGTGTTATATTTGCACACTTTTTTAAATAAAGACAACTCAAAATAATGGCCTAAAAAGGAAATATTCACTTGATAAATTGACCATCACAAGTTTAAATTTAGATCGACTTATATTTTTATGAGCTAATTTAATTTTGTCATTCTTAAATATAGGAATTCCGGGGAATCTCGATTTCAACATAATTGACGCAGATAACGAGAATTTCAAAAAGGTATTTGACGTTAACGTGTACGGATCATTTCTCGGTGCGAAATATGCTGCCCGGGTCATGATCCCAGAAAAGAAAGGTGTCATTCTTTTTACGTCTAGTTTGGCCTCCGTTTCCTCGGGTGAATCACCGCAT</genome_strand>
        <mrna_strand>TTCCTCTCTTATTTCCAAGAAAAATTGTTAAAAATGAATGGCTATTCCTCTCCTATAGCTCACACAAGCAGAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTAGAAGGGAAAGTAGCTATTGTAACAGGAGGAGCTAGTGGATTTGGAGAAAGTACAGTAAGACTTTTCTTACAAAATGGTGCAAAAGTTGTAATAGCTGATGTTCAAGATGAAATTGGACAATCTCTTTGCAATGATCTCCTCAATTGTCCTAAAAATAAAAACAATGATTTTACATACATACATTGTGATGTAACAAAGGTCTCCGACGTCGAAAACCTTATCGACGCAACAATTTCCAAGTATGGAAAACTCGATATCATGTTCAACAACGCAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATTCCGGGGAATCTCGATTTCAACATAATTGACGCAGATAACGAGAATTTCAAAAAGGTATTTGACGTTAACGTGTACGGATCATTTCTCGGTGCGAAATATGCTGCCCGGGTCATGATCCCAGAAAAGAAAGGTGTCATTCTTTTTACGTCTAGTTTGGCCTCCGGTTCCTCGGGTGAATCACCGCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E266614" ref_strand="+" ref_description="SGN-E266614 [cLEI-5-G7]">
      <seq>tcctctcttatttccaagaaaaattgttaaaaatgaatggctattcctctcctatagctcacacaagcagaagattagaagggaaagtagctattgtaacaggaggagctagtggatttggagaaagtacagtaagacttttcttacaaaatggtgcaaaagttgtaatagctgatgttcaagatgaaattggacaatctctttgcaatgatctcctcaattgtcctaaaaataaaaacaatgattttacatacatacattgtgatgtaacaaaggtctccgacgtcgaaaaccttatcgacgcaacaatttccaagtatggaaaactcgatatcatgttcaacaacgcaggtaggaatgttaaatgagcggtttaattgattttatataggttaaattaagctatatgtaattaatacatagacaatgacctctaaaggtttcttgagttgaatgaacagaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0101H16.1" temp_strand="-" temp_description="C02SLe0101H16.1  AC215444.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0101H16 sequenced_by:kribb upload_account_name:korea">
        <position start="55421" stop="53804"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="55121" g_stop="55049" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="73" r_length="73" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="55048" i_stop="54498" i_length="551">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="54497" g_stop="54104" g_length="394"/>
          <reference_exon_boundary r_type="cDNA" r_start="74" r_stop="467" r_length="394" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0101H16.1" gen_strand="-" ref_id="SGN-E266614" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>467</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0101H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E266614" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="55121" e_stop="55049"/>
          <exon e_start="54497" e_stop="54104"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCTCTCTTATTTCCAAGAAAAATTGTTAAAAATGAATGGCTATTCCTCTCCTATAGCTCACACAAGCAGAAGGTAATAACCTTACTTTTATTTATTTTTTGTTTTTCGTGATATCCGATACTCATGTTAGAGTCCGACTAAATTTGTATTAGAAGTCAGGCTAAAGCGCTTCCTAACAAACATAACTCCTTACTCCTTATCAGGGGATTCGAACCCGAAATCTCTGATTAAAAATGAAGTAGTACTTATCACCCATACAATTTTTTTACTTAATTATGTCATTTATATCTTCATAGTTCAATATTTGCAACAATTTCTATGAGGTTTACACATATAAATTTAGGTCTATATGTGTTAAAAGTTATGAATTTAATTGAACTCATCTACGTACAATGTGTTAGATCTACTCTCATTCATTTTGATGTCATATTAATAATTTATGTATTATCTCATTTAAAAATTTAAGTTGTTATAAAATATCAATGGCGAATGCACAAGTATGAAATACGAGTTGGTGAAAATTCAGTATATTTTACTGTAAACTCAATTATTATCATATATTGACTTGAGATTGTTAAATTTTTTTTTTTTATAAATTTCAAATTCTGAATTCGGAAATGCAGATTAGAAGGGAAAGTAGCTATTGTAACAGGAGGAGCTAGTGGATTTGGAGAAAGTACAGTAAGACTTTTCTTACAAAATGGTGCAAAAGTTGTAATAGCTGATGTTCAAGATGAAATTGGACAATCTCTTTGCAATGATCTCCTCAATTGTCCTAAAAATAAAAACAATGATTTTACATACATACATTGTGATGTAACAAAGGTCTCCGACGTCGAAAACCTTATCGACGCAACAATTTCCAAGTATGGAAAACTCGATATCATGTTCAACAACGCAGGTAGGAATGTTAAATGAGCGGTTTAATTGATTTTATATAGGTTAAATTAAGCTATATGTAATTAATACATAGACAATGACCTCTAAAGGTTTCTTGAGTTGAATGAACAGAAAAAA</genome_strand>
        <mrna_strand>TCCTCTCTTATTTCCAAGAAAAATTGTTAAAAATGAATGGCTATTCCTCTCCTATAGCTCACACAAGCAGAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTAGAAGGGAAAGTAGCTATTGTAACAGGAGGAGCTAGTGGATTTGGAGAAAGTACAGTAAGACTTTTCTTACAAAATGGTGCAAAAGTTGTAATAGCTGATGTTCAAGATGAAATTGGACAATCTCTTTGCAATGATCTCCTCAATTGTCCTAAAAATAAAAACAATGATTTTACATACATACATTGTGATGTAACAAAGGTCTCCGACGTCGAAAACCTTATCGACGCAACAATTTCCAAGTATGGAAAACTCGATATCATGTTCAACAACGCAGGTAGGAATGTTAAATGAGCGGTTTAATTGATTTTATATAGGTTAAATTAAGCTATATGTAATTAATACATAGACAATGACCTCTAAAGGTTTCTTGAGTTGAATGAACAGAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E331059" ref_strand="+" ref_description="SGN-E331059 [cTOD-6-C20]">
      <seq>aacatatctgtcatttgtttgcttcaatctaaaccttcttaaactttttgtgttgtagtaaatgaatacctctgcattgaccgacatatttgaatcaaagcataattccttcaaattactagatcgggacttggtgaagagtagcaaaacaagcataattcatttcttgattgctcatcctccatctctcttctcagaattcttctaataaaggtacgctacatttatacatttgctaatcagagaaaaaagcaagttcgtaaatttttctttctgttttattttttgcagatttttatgttttttgtttcagatttagctcattttcatggatttggggagtcccaaagcctgtaggtcatattatgcacttctgttttgttgcttcgcaactaattttttcaatttatgtcttagacaagttcattataattcacgaatatcttcgtactgtatctgcttcaactaagactcattctgatttatatatatatatatatatatatatatatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0101H16.1" temp_strand="+" temp_description="C02SLe0101H16.1  AC215444.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0101H16 sequenced_by:kribb upload_account_name:korea">
        <position start="60102" stop="61214"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="60402" g_stop="60914" g_length="513"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="513" r_length="513" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0101H16.1" gen_strand="+" ref_id="SGN-E331059" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>513</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0101H16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E331059" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="60402" e_stop="60914"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACATATCTGTCATTTGTTTGCTTCAATCTAAACCTTCTTAAACTTTTTGTGTTGTAGTAAATGAATACCTCTGCATTGACCGACATATTTGAATCAAAGCATAATTCCTTCAAATTACTAGATCGGGACTTGGTGAAGAGTAGCAAAACAAGCATAATTCATTTCTTGATTGCTCATCCTCCATCTCTCTTCTCAGAATTCTTCTAATAAAGGTACGCTACATTTATACATTTGCTAATCAGAGAAAAAAGCAAGTTCGTAAATTTTTCTTTCTGTTTTATTTTTTGCAGATTTTTATGTTTTTTGTTTCAGATTTAGCTCATTTTCATGGATTTGGGGAGTCCCAAAGCCTGTAGGTCATATTATGCACTTCTGTTTTGTTGCTTCGCAACTAATTTTTTCAATTTATGTCTTAGACAAGTTCATTATAATTCACGAATATCTTCGTACTGTATCTGCTTCAACTAAGACTCATTCTGATTTATATATATATATATATATATATATATATG</genome_strand>
        <mrna_strand>AACATATCTGTCATTTGTTTGCTTCAATCTAAACCTTCTTAAACTTTTTGTGTTGTAGTAAATGAATACCTCTGCATTGACCGACATATTTGAATCAAAGCATAATTCCTTCAAATTACTAGATCGGGACTTGGTGAAGAGTAGCAAAACAAGCATAATTCATTTCTTGATTGCTCATCCTCCATCTCTCTTCTCAGAATTCTTCTAATAAAGGTACGCTACATTTATACATTTGCTAATCAGAGAAAAAAGCAAGTTCGTAAATTTTTCTTTCTGTTTTATTTTTTGCAGATTTTTATGTTTTTTGTTTCAGATTTAGCTCATTTTCATGGATTTGGGGAGTCCCAAAGCCTGTAGGTCATATTATGCACTTCTGTTTTGTTGCTTCGCAACTAATTTTTTCAATTTATGTCTTAGACAAGTTCATTATAATTCACGAATATCTTCGTACTGTATCTGCTTCAACTAAGACTCATTCTGATTTATATATATATATATATATATATATATATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E544143" ref_strand="+" ref_description="SGN-E544143 [TUS-66-F5](-)">
      <seq>agtaattgaaaagtagaattggatagattttgttaaaattcaaatcagtgcattgacactgacgcttgggttgagcttagcagcctattatgtaagaaattcgattaatgggagtgttgagtaacaaccaagtgtgtttggtatgacaggagttatttaagggtcaatcctagttggtaccgctttggatgttggagaaattgattgttagtaattgttgagggtattagtgtagttcgttaattttttgtgacatatgcaagcatgcaaggtcaataaagcattataattcgaacaaaaatgaaagctcattgtaaaggtcagtgagatcagagatgtttttctttttttaattttgagtgtagcttgcttctttcttttaactacagaagaatcacgtgtgaagatgaaaataagtacttaaaattgtgtgtcttaaacctctgaaaccatatatgctggaaattttgtagtttctgcagctgcgaagttttcctcatcttgtctgcaaataagtgaaacatttgtaatttcccattttcataatctggtcctgaacaacaggaaaagaaacctctttttctgcttgataaatgaccaagtaagagtattttccttctgggcgtttctcttatcaggttgaacattgtcaaaaccttttttcttcccccctgtctgaagtttagagtcatatgaggcagtatgaagtggtttgagctgcttgtctttcttagaatgtattcttatttccgaaagataacaaaaatgaagcatgtaatttattatcacttatgctaaatcacaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0101H16.1" temp_strand="-" temp_description="C02SLe0101H16.1  AC215444.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0101H16 sequenced_by:kribb upload_account_name:korea">
        <position start="75423" stop="74011"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="75123" g_stop="74311" g_length="813"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="813" r_length="813" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0101H16.1" gen_strand="-" ref_id="SGN-E544143" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>813</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0101H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E544143" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="75123" e_stop="74311"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTAATTGAAAAGTAGAATTGGATAGATTTTGTTAAAATTCAAATCAGTGCATTGACACTGACGCTTGGGTTGAGCTTAGCAGCCTATTATGTAAGAAATTCGATTAATGGGAGTGTTGAGTAACAACCAAGTGTGTTTGGTATGACAGGAGTTATTTAAGGGTCAATCCTAGTTGGTACCGCTTTGGATGTTGGAGAAATTGATTGTTAGTAATTGTTGAGGGTATTAGTGTAGTTCGTTAATTTTTTGTGACATATGCAAGCATGCAAGGTCAATAAAGCATTATAATTCGAACAAAAATGAAAGCTCATTGTAAAGGTCAGTGAGATCAGAGATGTTTTTCTTTTTTTAATTTTGAGTGTAGCTTGCTTCTTTCTTTTAACTACAGAAGAATCACGTGTGAAGATGAAAATAAGTACTTAAAATTGTGTGTCTTAAACCTCTGAAACCATATATGCTGGAAATTTTGTAGTTTCTGCAGCTGCGAAGTTTTCCTCATCTTGTCTGCAAATAAGTGAAACATTTGTAATTTCCCATTTTCATAATCTGGTCCTGAACAACAGGAAAAGAAACCTCTTTTTCTGCTTGATAAATGACCAAGTAAGAGTATTTTCCTTCTGGGCGTTTCTCTTATCAGGTTGAACATTGTCAAAACCTTTTTTCTTCCCCCCTGTCTGAAGTTTAGAGTCATATGAGGCAGTATGAAGTGGTTTGAGCTGCTTGTCTTTCTTAGAATGTATTCTTATTTCCGAAAGATAACAAAAATGAAGCATGTAATTTATTATCACTTATGCTAAATCACAAAAAAAAAA</genome_strand>
        <mrna_strand>AGTAATTGAAAAGTAGAATTGGATAGATTTTGTTAAAATTCAAATCAGTGCATTGACACTGACGCTTGGGTTGAGCTTAGCAGCCTATTATGTAAGAAATTCGATTAATGGGAGTGTTGAGTAACAACCAAGTGTGTTTGGTATGACAGGAGTTATTTAAGGGTCAATCCTAGTTGGTACCGCTTTGGATGTTGGAGAAATTGATTGTTAGTAATTGTTGAGGGTATTAGTGTAGTTCGTTAATTTTTTGTGACATATGCAAGCATGCAAGGTCAATAAAGCATTATAATTCGAACAAAAATGAAAGCTCATTGTAAAGGTCAGTGAGATCAGAGATGTTTTTCTTTTTTTAATTTTGAGTGTAGCTTGCTTCTTTCTTTTAACTACAGAAGAATCACGTGTGAAGATGAAAATAAGTACTTAAAATTGTGTGTCTTAAACCTCTGAAACCATATATGCTGGAAATTTTGTAGTTTCTGCAGCTGCGAAGTTTTCCTCATCTTGTCTGCAAATAAGTGAAACATTTGTAATTTCCCATTTTCATAATCTGGTCCTGAACAACAGGAAAAGAAACCTCTTTTTCTGCTTGATAAATGACCAAGTAAGAGTATTTTCCTTCTGGGCGTTTCTCTTATCAGGTTGAACATTGTCAAAACCTTTTTTCTTCCCCCCTGTCTGAAGTTTAGAGTCATATGAGGCAGTATGAAGTGGTTTGAGCTGCTTGTCTTTCTTAGAATGTATTCTTATTTCCGAAAGATAACAAAAATGAAGCATGTAATTTATTATCACTTATGCTAAATCACAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E307002" ref_strand="+" ref_description="SGN-E307002 [cLEY-11-D18]">
      <seq>ttccttctagtttttattatatgattcttcttacttgcatatatgatttattttagcttatcaatttgataaatagctccaaatttgctgtgtaataaagggaaagaggcattttcttttggattgattaatgttgcaattataataaataaattgaaacggagaaaggaataaacaatgctcctccctgtaaggaacaatcgttgagtgaattgtatcttttttgtgttagttgaattaagcgcccaagtgattttattccaaacgttctaaacctaagtaattgaaaagtagaattggatagattttgttaaaattcaaatcagtgcattgacactgacgcttgggttgagcttagcagcctattatgtaagaaattcgattaatgggagtgttgagtaacaaccaagtgtgtttggtatgacaggagttatttaagggtcaatcctagttggtaccgctttggatgttggagaaattgattgttagtaattgttgagggtattagtgtagttcgttaattttttgtgacatatgcaagcatgcaaggtcaataaagcattataattcgaacaaaaatgaaagctcattgtaaaggtcagtgagatcagagatgtttttctttttttaattttgag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0101H16.1" temp_strand="-" temp_description="C02SLe0101H16.1  AC215444.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0101H16 sequenced_by:kribb upload_account_name:korea">
        <position start="75701" stop="74464"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="75401" g_stop="74764" g_length="638"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="638" r_length="638" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0101H16.1" gen_strand="-" ref_id="SGN-E307002" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>638</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0101H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E307002" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="75401" e_stop="74764"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCCTTCTAGTTTTTATTATATGATTCTTCTTACTTGCATATATGATTTATTTTAGCTTATCAATTTGATAAATAGCTCCAAATTTGCTGTGTAATAAAGGGAAAGAGGCATTTTCTTTTGGATTGATTAATGTTGCAATTATAATAAATAAATTGAAACGGAGAAAGGAATAAACAATGCTCCTCCCTGTAAGGAACAATCGTTGAGTGAATTGTATCTTTTTTGTGTTAGTTGAATTAAGCGCCCAAGTGATTTTATTCCAAACGTTCTAAACCTAAGTAATTGAAAAGTAGAATTGGATAGATTTTGTTAAAATTCAAATCAGTGCATTGACACTGACGCTTGGGTTGAGCTTAGCAGCCTATTATGTAAGAAATTCGATTAATGGGAGTGTTGAGTAACAACCAAGTGTGTTTGGTATGACAGGAGTTATTTAAGGGTCAATCCTAGTTGGTACCGCTTTGGATGTTGGAGAAATTGATTGTTAGTAATTGTTGAGGGTATTAGTGTAGTTCGTTAATTTTTTGTGACATATGCAAGCATGCAAGGTCAATAAAGCATTATAATTCGAACAAAAATGAAAGCTCATTGTAAAGGTCAGTGAGATCAGAGATGTTTTTCTTTTTTTAATTTTGAG</genome_strand>
        <mrna_strand>TTCCTTCTAGTTTTTATTATATGATTCTTCTTACTTGCATATATGATTTATTTTAGCTTATCAATTTGATAAATAGCTCCAAATTTGCTGTGTAATAAAGGGAAAGAGGCATTTTCTTTTGGATTGATTAATGTTGCAATTATAATAAATAAATTGAAACGGAGAAAGGAATAAACAATGCTCCTCCCTGTAAGGAACAATCGTTGAGTGAATTGTATCTTTTTTGTGTTAGTTGAATTAAGCGCCCAAGTGATTTTATTCCAAACGTTCTAAACCTAAGTAATTGAAAAGTAGAATTGGATAGATTTTGTTAAAATTCAAATCAGTGCATTGACACTGACGCTTGGGTTGAGCTTAGCAGCCTATTATGTAAGAAATTCGATTAATGGGAGTGTTGAGTAACAACCAAGTGTGTTTGGTATGACAGGAGTTATTTAAGGGTCAATCCTAGTTGGTACCGCTTTGGATGTTGGAGAAATTGATTGTTAGTAATTGTTGAGGGTATTAGTGTAGTTCGTTAATTTTTTGTGACATATGCAAGCATGCAAGGTCAATAAAGCATTATAATTCGAACAAAAATGAAAGCTCATTGTAAAGGTCAGTGAGATCAGAGATGTTTTTCTTTTTTTAATTTTGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E544144" ref_strand="+" ref_description="SGN-E544144 [TUS-66-F5]">
      <seq>gttccttctagtttttattatatgattcttcttacttgcatatatgatttattttagcttatcaatttgataaatagctccaaatttgctgtgtaataaagggaaagaggcattttcttttggattgattaatgttgcaattataataaataaattgaaacggagaaaggaataaacaatgctcctccctgtaaggaacaatcgttgagtgaattgtatcttttttgtgttagttgaattaagcgcccaagtgattttattccaaacgttctaaacctaagtaattgaaaagtagaattggatagattttgttaaaattcaaatcagtgcattgacactgacgcttgggttgagcttagcagcctattatgtaagaaattcgattaatgggagtgttgagtaacaaccaagtgtgtttggtatgacaggagttatttaagggtcaatcctagttggtaccgctttggatgttggagaaattgattgttagtaattgttgagggtaattagtgtagttcgttaattttttgtgacatatgcaagcatgcaaggtcaataaagcattataattcgaacaaaaatgaaagctcattgtaaaggtcagtgagatcagagatgtttttcttttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0101H16.1" temp_strand="-" temp_description="C02SLe0101H16.1  AC215444.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0101H16 sequenced_by:kribb upload_account_name:korea">
        <position start="75702" stop="74475"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="75402" g_stop="74775" g_length="628"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="629" r_length="629" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0101H16.1" gen_strand="-" ref_id="SGN-E544144" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>628</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0101H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E544144" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="75402" e_stop="74775"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTCCTTCTAGTTTTTATTATATGATTCTTCTTACTTGCATATATGATTTATTTTAGCTTATCAATTTGATAAATAGCTCCAAATTTGCTGTGTAATAAAGGGAAAGAGGCATTTTCTTTTGGATTGATTAATGTTGCAATTATAATAAATAAATTGAAACGGAGAAAGGAATAAACAATGCTCCTCCCTGTAAGGAACAATCGTTGAGTGAATTGTATCTTTTTTGTGTTAGTTGAATTAAGCGCCCAAGTGATTTTATTCCAAACGTTCTAAACCTAAGTAATTGAAAAGTAGAATTGGATAGATTTTGTTAAAATTCAAATCAGTGCATTGACACTGACGCTTGGGTTGAGCTTAGCAGCCTATTATGTAAGAAATTCGATTAATGGGAGTGTTGAGTAACAACCAAGTGTGTTTGGTATGACAGGAGTTATTTAAGGGTCAATCCTAGTTGGTACCGCTTTGGATGTTGGAGAAATTGATTGTTAGTAATTGTTGAGGGT-ATTAGTGTAGTTCGTTAATTTTTTGTGACATATGCAAGCATGCAAGGTCAATAAAGCATTATAATTCGAACAAAAATGAAAGCTCATTGTAAAGGTCAGTGAGATCAGAGATGTTTTTCTTTTT</genome_strand>
        <mrna_strand>GTTCCTTCTAGTTTTTATTATATGATTCTTCTTACTTGCATATATGATTTATTTTAGCTTATCAATTTGATAAATAGCTCCAAATTTGCTGTGTAATAAAGGGAAAGAGGCATTTTCTTTTGGATTGATTAATGTTGCAATTATAATAAATAAATTGAAACGGAGAAAGGAATAAACAATGCTCCTCCCTGTAAGGAACAATCGTTGAGTGAATTGTATCTTTTTTGTGTTAGTTGAATTAAGCGCCCAAGTGATTTTATTCCAAACGTTCTAAACCTAAGTAATTGAAAAGTAGAATTGGATAGATTTTGTTAAAATTCAAATCAGTGCATTGACACTGACGCTTGGGTTGAGCTTAGCAGCCTATTATGTAAGAAATTCGATTAATGGGAGTGTTGAGTAACAACCAAGTGTGTTTGGTATGACAGGAGTTATTTAAGGGTCAATCCTAGTTGGTACCGCTTTGGATGTTGGAGAAATTGATTGTTAGTAATTGTTGAGGGTAATTAGTGTAGTTCGTTAATTTTTTGTGACATATGCAAGCATGCAAGGTCAATAAAGCATTATAATTCGAACAAAAATGAAAGCTCATTGTAAAGGTCAGTGAGATCAGAGATGTTTTTCTTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E298638" ref_strand="+" ref_description="SGN-E298638 [cLET-44-A20]">
      <seq>tcattacatcggatttcagggtgagctaacgcttctagcttggactggatcttcttcttcatgtcttgatgccttgaagttccggcatggactagctgtttatgtattttagcttcttagatactcttagatttagtaatttgaagtacatgttcttgtgatgatgactgccagattttggggataataatagttgttgagtttttagaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0101H16.1" temp_strand="-" temp_description="C02SLe0101H16.1  AC215444.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0101H16 sequenced_by:kribb upload_account_name:korea">
        <position start="81774" stop="80965"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81474" g_stop="81256" g_length="219"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="219" r_length="219" r_score="0.927"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0101H16.1" gen_strand="-" ref_id="SGN-E298638" ref_strand="+">
        <total_alignment_score>0.927</total_alignment_score>
        <cumulative_length_of_scored_exons>219</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0101H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E298638" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81474" e_stop="81256"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCATTACTCCGGATATCAGGGTGAGCTAATGTTTCTAGCTTGGACTGGATCTTCCTCTTCATGTCTTGATGCCTTGAAGTTCCGGCATGGACTAGCTTTTTATGTATTTTAGCTTCTTAGATACTCTTAGTTTTAGTAATTTGAAGTAGATGTTCTTGTGATGATGACTTCCAGATTTTGGGGATAATAATAGTTGTTGAGTTTTTAGAAGTTATTGAA</genome_strand>
        <mrna_strand>TCATTACATCGGATTTCAGGGTGAGCTAACGCTTCTAGCTTGGACTGGATCTTCTTCTTCATGTCTTGATGCCTTGAAGTTCCGGCATGGACTAGCTGTTTATGTATTTTAGCTTCTTAGATACTCTTAGATTTAGTAATTTGAAGTACATGTTCTTGTGATGATGACTGCCAGATTTTGGGGATAATAATAGTTGTTGAGTTTTTAGAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E242359" ref_strand="+" ref_description="SGN-E242359 [cLEE-3-K21]">
      <seq>cctaatctactttgttaataatgatgccttggtataaaagaaggcttgatgaacgaaagtggtgagattaggggatcgggtgccacgttccggtaccaggatagaatatggatcgggtgtcacgttccgacaccaggatagaatatggatcgggtgccacgttccggtaccaggatagaatatggatcgggtgtcacgttccgacaccaggatagaatatggatcgggtgtcacgttctgacaccaggatagaatatggatcgggtgccacgttccggtgccaggatagtatattgaggagtggagtgtcacgtaaggacacgaggggaataaatatgatgaatcttgaaatatgttaatatatgcaatccaatgaactaaattcccaaataagtatgatgaggaggtgtgagtcctcattgatgtgcttggtgatgcaaccaagggttatggtaattgcaaatgctgcatgctaaggatattagttaattttatgatattgcttaatacatact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0101H16.1" temp_strand="-" temp_description="C02SLe0101H16.1  AC215444.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0101H16 sequenced_by:kribb upload_account_name:korea">
        <position start="82786" stop="81333"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82486" g_stop="82254" g_length="233"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="227" r_length="227" r_score="0.948"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82253" i_stop="81983" i_length="271">
            <donor d_prob="0.000" d_score="0.94"/>
            <acceptor a_prob="0.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81982" g_stop="81916" g_length="67"/>
          <reference_exon_boundary r_type="cDNA" r_start="228" r_stop="294" r_length="67" r_score="0.970"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81915" i_stop="81840" i_length="76">
            <donor d_prob="0.000" d_score="0.98"/>
            <acceptor a_prob="0.000" a_score="0.84"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="81839" g_stop="81619" g_length="221"/>
          <reference_exon_boundary r_type="cDNA" r_start="295" r_stop="515" r_length="221" r_score="0.842"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0101H16.1" gen_strand="-" ref_id="SGN-E242359" ref_strand="+">
        <total_alignment_score>0.906</total_alignment_score>
        <cumulative_length_of_scored_exons>521</cumulative_length_of_scored_exons>
        <coverage percentage="1.012" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0101H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E242359" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82486" e_stop="82254"/>
          <exon e_start="81982" e_stop="81916"/>
          <exon e_start="81839" e_stop="81619"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTAATCTACTTTGTTAATGATGATGCCTTGGTATAAAAGAAGGCTGGATGAACGAAAGTAGTGAGATTAGGGGATCGGGTGCCACGTTCCGGTACCAGGATAGTATATGAGGATCGGAGTGTCACGTTCCGACACCAGGATAGAATATGGATCGGGTGCCACGTTCCGGTACCAAGATAGTATATGAGGATCGGAGTGTCACGTTCCGACACCAGGATAGAATATGGATCGGGTGCCACGTTCCGGTACCAGGATAGTATATGAGGATTGGAGTGTCACGTTCCGACACCAGGATAGAATATGAATCGGGTGCCACGTTCCGGTACCAGGATAGTATATGAGGATCGAAGTGTCACGTTCCGACACCAGGATAGAATATGGATCGGGTGCCACGTTCCGGTACCAGGATAGTATATGAGGATCGGAGTGTCACATTCCGACACCAGGATAGAATATGGATCGGGTGCCACGTTCCGGTACCAGGATAGTATATGAGGATCGGAGTGTCACGTTCCGACACCAGGATAGAATATGGATCGGGTGCCACGTTCCGGTACCAGGATAGTATATGGATCGGGTGCCACGTTCCAGTACCAGGATAGTATATGAGGATCGGTGTGTCACATTTCGACACCAGGATAGTATATGAGGAGCGAAGTGTCACGTACCGACACGAAAGGAATAAAGATAATGAATCTTGAAAAATGTTAATATACTCAATCTAATGAACCTAATTCCCAAATGAGTATGATGAGGAGGCGTGAGTCCTCATTGATGAGCTTGGTGTTATGACCAAGGGTTATGGTACTTGTAAATGCCGCATGTTGAGTATTGTAGTTGATTTTATGATATTATCTGATATATACT</genome_strand>
        <mrna_strand>CCTAATCTACTTTGTTAATAATGATGCCTTGGTATAAAAGAAGGCTTGATGAACGAAAGTGGTGAGATTAGGGGATCGGGTGCCACGTTCCGGTACCAGGATAGAATAT--GGATCGG-GTGTCACGTTCCGACACCAGGATAGAATATGGATCGGGTGCCACGTTCCGGTACCAGGATAGAATAT--GGATCGG-GTGTCACGTTCCGACACCAGGATAGAATATGGATCGG...............................................................................................................................................................................................................................................................................GTGTCACGTTCTGACACCAGGATAGAATATGGATCGGGTGCCACGTTCCGGTGCCAGGATAGTATAT............................................................................TGAGGAGTGGAGTGTCACGTAAGGACACGAGGGGAATAAATATGATGAATCTTGAAATATGTTAATATATGCAATCCAATGAACTAAATTCCCAAATAAGTATGATGAGGAGGTGTGAGTCCTCATTGATGTGCTTGGTGATGCAACCAAGGGTTATGGTAATTGCAAATGCTGCATGCTAAGGATATTAGTTAATTTTATGATATTGCTTAATACATACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>81</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="-" PGL_start="4094" PGL_stop="594"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="4094" e_stop="3945"/>
            <exon e_start="641" e_stop="594"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.979" acc_prob="0.784" e_score="0.987"/>
          <exon-only e_score="0.979"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.987">
            <gDNA_exon_boundary e_start="4094" e_stop="3945" e_length="150"/>
          </exon>
          <intron i_serial="1" don_prob="0.979" acc_prob="0.784">
            <gDNA_intron_boundary i_start="3944" i_stop="642" i_length="3303"/>
          </intron>
          <exon e_serial="2" e_score="0.979">
            <gDNA_exon_boundary e_start="641" e_stop="594" e_length="48"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="4094" stop="3945"/>
              <exon start="641" stop="594"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E236168" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TGACTTTTACCTTTGCTGCCTCTTCTTGTTTTTTTCATCCATTTCTGCTTCTCCTTCTTCCTAGTCGATCTCTGCACGAATCCGAAAAAACCCCTTTTTTTTGGAAATAGTTAGCTATGACTCTTGGTTCAGGAGGATCTAGTGTTGTGG : TCCCTCGGAATTTCAGATTACTTGAGGAACTTGAACGTGGTGAAAAGG</gDNA_template>
            <first_frame> *  L  L  P  L  L  P  L  L  V  F  F  I  H  F  C  F  S  F  F  L  V  D  L  C  T  N  P  K  K  P  L  F  F  G  N  S  *  L  *  L  L  V  Q  E  D  L  V  L  W  :  S  L  G  I  S  D  Y  L  R  N  L  N  V  V  K  R </first_frame>
            <second_frame>  D  F  Y  L  C  C  L  F  L  F  F  S  S  I  S  A  S  P  S  S  *  S  I  S  A  R  I  R  K  N  P  F  F  L  E  I  V  S  Y  D  S  W  F  R  R  I  *  C  C  G :   P  S  E  F  Q  I  T  *  G  T  *  T  W  *  K   </second_frame>
            <third_frame>   T  F  T  F  A  A  S  S  C  F  F  H  P  F  L  L  L  L  L  P  S  R  S  L  H  E  S  E  K  T  P  F  F  W  K  *  L  A  M  T  L  G  S  G  G  S  S  V  V   : V  P  R  N  F  R  L  L  E  E  L  E  R  G  E  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02SLe0101H16.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="+" PGL_start="3926" PGL_stop="4090"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="3926" e_stop="4090"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.915"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.915">
            <gDNA_exon_boundary e_start="3926" e_stop="4090" e_length="165"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="3926" stop="4090"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E229874" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GATGTAAAATTTGACTCACCCACAACACTAGATCCTCCTGAACCAAGAGTCATAGCTAACTATTTCCAAAAAAAAGGGGTTTTTTCGGATTCGTGCAGAGATCGACTAGGAAGAAGGAGAAGCAGAAATGGATGAAAAAAACAAGAAGAGGCAGCAAAGGTAAAA</gDNA_template>
            <first_frame> D  V  K  F  D  S  P  T  T  L  D  P  P  E  P  R  V  I  A  N  Y  F  Q  K  K  G  V  F  S  D  S  C  R  D  R  L  G  R  R  R  S  R  N  G  *  K  K  Q  E  E  A  A  K  V  K </first_frame>
            <second_frame>  M  *  N  L  T  H  P  Q  H  *  I  L  L  N  Q  E  S  *  L  T  I  S  K  K  K  G  F  F  R  I  R  A  E  I  D  *  E  E  G  E  A  E  M  D  E  K  N  K  K  R  Q  Q  R  *   </second_frame>
            <third_frame>   C  K  I  *  L  T  H  N  T  R  S  S  *  T  K  S  H  S  *  L  F  P  K  K  R  G  F  F  G  F  V  Q  R  S  T  R  K  K  E  K  Q  K  W  M  K  K  T  R  R  G  S  K  G  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02SLe0101H16.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="-" PGL_start="10039" PGL_stop="8870"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="10039" e_stop="9766"/>
            <exon e_start="9460" e_stop="8870"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.996" e_score="0.996"/>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.996">
            <gDNA_exon_boundary e_start="10039" e_stop="9766" e_length="274"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.996">
            <gDNA_intron_boundary i_start="9765" i_stop="9461" i_length="305"/>
          </intron>
          <exon e_serial="2" e_score="0.998">
            <gDNA_exon_boundary e_start="9460" e_stop="8870" e_length="591"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10039" stop="9766"/>
              <exon start="9460" stop="8915"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E708135" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="9873" stop="9766"/>
              <exon start="9460" stop="8940"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E344502" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="9872" stop="9766"/>
              <exon start="9460" stop="8870"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E342196" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="9799" stop="9766"/>
              <exon start="9460" stop="9020"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E243838" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CCCCCTCTCCCCCTCTCTTAACTTCTCTCACTAAAAGTCTAACTTGCTCCAACCCCTCTCCCTATAATTTAATTAAGCTTTAAAAGCAATCTCCTCTCTACCTTCAATAGTTCCCATTATATAATATGGCCTTTTACAAGTTCAAAAATCATCATCTAGGACCACAAAATACAAGTATAACTAATTGTTTATCTTAGTGGTGGTTCCGTTTATATCTCCTCCGTACTCCGCCGTGTCGTTTCGACTACAAAAACCCCTCACTTCCGATCTCAAG : AATGAGCAGGAGAAATGGAAATGGTTCAAGGCTTGACCTAAAATTGAATTTGTCACCACCACCTAGAGTGAACCACGTGGGGCCACAAGTGGAGTCGCCGACAAGGTCGCTGACAATGTCCCCGACGAATTCATGTGTATCATCTGATAATTCGTCGGGGGGACAACGTGGTTCCAACAGCCCCGAAGCGGTGACTTCGATGCTGTTGGTTGGTTGTCAAAGGTGTCTAATGTATGTTATGGTATCGGAAGTTAATGATCCACCAAGGTGCCCAAAATGCAAGAGTACTTGTTTGCTTGAAGTTATCTATGAGAAAAAATAAGAAGGTCAATCATCAGTCAAGATCAAATCCATCAAATTCTCGTATTACTAGGTTTATCAATATCACCGCCCTGCCCCCACCTTGAAAAAAAATATATACATGAAAAGTTAAAACTTTTGGTATTGCTCTTTTCGACTTTCTATAAATAGCACTATATGAGCTCCATTTTGTCTCTTTTAAAAATTATGAAAAAAAGGAATTTTGGAGCTTCTATAGTGCTATGTATTATTTTATTTTTATTTTTATGGGTTAATTAGGTTTATTTCTAG</gDNA_template>
            <first_frame> P  P  L  P  L  S  *  L  L  S  L  K  V  *  L  A  P  T  P  L  P  I  I  *  L  S  F  K  S  N  L  L  S  T  F  N  S  S  H  Y  I  I  W  P  F  T  S  S  K  I  I  I  *  D  H  K  I  Q  V  *  L  I  V  Y  L  S  G  G  S  V  Y  I  S  S  V  L  R  R  V  V  S  T  T  K  T  P  H  F  R  S  Q   : E  *  A  G  E  M  E  M  V  Q  G  L  T  *  N  *  I  C  H  H  H  L  E  *  T  T  W  G  H  K  W  S  R  R  Q  G  R  *  Q  C  P  R  R  I  H  V  Y  H  L  I  I  R  R  G  D  N  V  V  P  T  A  P  K  R  *  L  R  C  C  W  L  V  V  K  G  V  *  C  M  L  W  Y  R  K  L  M  I  H  Q  G  A  Q  N  A  R  V  L  V  C  L  K  L  S  M  R  K  N  K  K  V  N  H  Q  S  R  S  N  P  S  N  S  R  I  T  R  F  I  N  I  T  A  L  P  P  P  *  K  K  I  Y  T  *  K  V  K  T  F  G  I  A  L  F  D  F  L  *  I  A  L  Y  E  L  H  F  V  S  F  K  N  Y  E  K  K  E  F  W  S  F  Y  S  A  M  Y  Y  F  I  F  I  F  M  G  *  L  G  L  F  L  </first_frame>
            <second_frame>  P  L  S  P  S  L  N  F  S  H  *  K  S  N  L  L  Q  P  L  S  L  *  F  N  *  A  L  K  A  I  S  S  L  P  S  I  V  P  I  I  *  Y  G  L  L  Q  V  Q  K  S  S  S  R  T  T  K  Y  K  Y  N  *  L  F  I  L  V  V  V  P  F  I  S  P  P  Y  S  A  V  S  F  R  L  Q  K  P  L  T  S  D  L  K  :  N  E  Q  E  K  W  K  W  F  K  A  *  P  K  I  E  F  V  T  T  T  *  S  E  P  R  G  A  T  S  G  V  A  D  K  V  A  D  N  V  P  D  E  F  M  C  I  I  *  *  F  V  G  G  T  T  W  F  Q  Q  P  R  S  G  D  F  D  A  V  G  W  L  S  K  V  S  N  V  C  Y  G  I  G  S  *  *  S  T  K  V  P  K  M  Q  E  Y  L  F  A  *  S  Y  L  *  E  K  I  R  R  S  I  I  S  Q  D  Q  I  H  Q  I  L  V  L  L  G  L  S  I  S  P  P  C  P  H  L  E  K  K  Y  I  H  E  K  L  K  L  L  V  L  L  F  S  T  F  Y  K  *  H  Y  M  S  S  I  L  S  L  L  K  I  M  K  K  R  N  F  G  A  S  I  V  L  C  I  I  L  F  L  F  L  W  V  N  *  V  Y  F  * </second_frame>
            <third_frame>   P  S  P  P  L  L  T  S  L  T  K  S  L  T  C  S  N  P  S  P  Y  N  L  I  K  L  *  K  Q  S  P  L  Y  L  Q  *  F  P  L  Y  N  M  A  F  Y  K  F  K  N  H  H  L  G  P  Q  N  T  S  I  T  N  C  L  S  *  W  W  F  R  L  Y  L  L  R  T  P  P  C  R  F  D  Y  K  N  P  S  L  P  I  S  R :   M  S  R  R  N  G  N  G  S  R  L  D  L  K  L  N  L  S  P  P  P  R  V  N  H  V  G  P  Q  V  E  S  P  T  R  S  L  T  M  S  P  T  N  S  C  V  S  S  D  N  S  S  G  G  Q  R  G  S  N  S  P  E  A  V  T  S  M  L  L  V  G  C  Q  R  C  L  M  Y  V  M  V  S  E  V  N  D  P  P  R  C  P  K  C  K  S  T  C  L  L  E  V  I  Y  E  K  K  *  E  G  Q  S  S  V  K  I  K  S  I  K  F  S  Y  Y  *  V  Y  Q  Y  H  R  P  A  P  T  L  K  K  N  I  Y  M  K  S  *  N  F  W  Y  C  S  F  R  L  S  I  N  S  T  I  *  A  P  F  C  L  F  *  K  L  *  K  K  G  I  L  E  L  L  *  C  Y  V  L  F  Y  F  Y  F  Y  G  L  I  R  F  I  S   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0101H16.1" strand="-"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="9842" stop="9766"/>
                    <exon start="9460" stop="9139"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>396</number_coding_nucleotides>
                  <number_encoded_amino_acids>132</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>WWFRLYLLRTPPCRFDYKNPSLPISRMSRRNGNGSRLDLKLNLSPPPRVNHVGPQVESPTRSLTMSPTNSCVSSDNSSGGQRGSNSPEAVTSMLLVGCQRCLMYVMVSEVNDPPRCPKCKSTCLLEVIYEKK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="-" PGL_start="19827" PGL_stop="13131"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="16234" e_stop="15532"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.927"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.927">
            <gDNA_exon_boundary e_start="16234" e_stop="15532" e_length="703"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16234" stop="15532"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E379315" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16234" stop="15639"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E375319" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16234" stop="15709"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E204434" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16163" stop="15532"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E368762" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16163" stop="15805"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E240817" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GAATCCCTTGACGAATCGACGGTAGTAGCTAGCTAACCCAACAAAGCTCGTTATTTCTAACACATTAGTAGGTCTCACCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCACGTGTCCCAAGAAGGACACTGCATCTAGCCAAAACTCACACTTAGAGAACTTGGCATAAAGCTTTTTCTCCCTTAACATTTCCAATACCATTCTCAAATGCTCTTCATGTTCCTTCTTGCTCTTTGAGTATACCAATATATCATCAATAAATACGATCACGAAGAGGTCCAAATATGGCTTAAAAATCCCGTTCATCAAGCTCATGAACGCAGCAGGGGCATTCGTAAGACCAAAAGACATCACTACAAATTCGTAATGCCCATACCTCGTTCGAAAAGCAGTCTTTGGCACATCCGTTGCCCATATTTTCAATTGATGATAACCGGATCTCAAGTCAATCTTAGAGAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATCAATGCGGGGAAGAGGATACTTGTTCTTTATGGTTACCTTGTTTAGTTGTCTGTAGTCTATACACATTCGAAAACTCCCATCCTTCTTCTTCACAAACAAAATCGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAGCCTTTGCTCAACAACTCTTGAAGTTGGGCTTTTAACTCCCTT</gDNA_template>
            <first_frame> E  S  L  D  E  S  T  V  V  A  S  *  P  N  K  A  R  Y  F  *  H  I  S  R  S  H  P  I  L  H  C  L  N  L  R  R  I  H  H  H  S  I  L  R  N  H  V  S  Q  E  G  H  C  I  *  P  K  L  T  L  R  E  L  G  I  K  L  F  L  P  *  H  F  Q  Y  H  S  Q  M  L  F  M  F  L  L  A  L  *  V  Y  Q  Y  I  I  N  K  Y  D  H  E  E  V  Q  I  W  L  K  N  P  V  H  Q  A  H  E  R  S  R  G  I  R  K  T  K  R  H  H  Y  K  F  V  M  P  I  P  R  S  K  S  S  L  W  H  I  R  C  P  Y  F  Q  L  M  I  T  G  S  Q  V  N  L  R  E  D  T  S  T  L  *  L  I  E  Q  V  I  N  A  G  K  R  I  L  V  L  Y  G  Y  L  V  *  L  S  V  V  Y  T  H  S  K  T  P  I  L  L  L  H  K  Q  N  R  S  T  P  R  R  C  T  W  S  N  E  A  F  A  Q  Q  L  L  K  L  G  F  *  L  P  </first_frame>
            <second_frame>  N  P  L  T  N  R  R  *  *  L  A  N  P  T  K  L  V  I  S  N  T  L  V  G  L  T  Q  F  F  T  V  S  I  L  E  G  S  T  I  T  P  S  L  E  T  T  C  P  K  K  D  T  A  S  S  Q  N  S  H  L  E  N  L  A  *  S  F  F  S  L  N  I  S  N  T  I  L  K  C  S  S  C  S  F  L  L  F  E  Y  T  N  I  S  S  I  N  T  I  T  K  R  S  K  Y  G  L  K  I  P  F  I  K  L  M  N  A  A  G  A  F  V  R  P  K  D  I  T  T  N  S  *  C  P  Y  L  V  R  K  A  V  F  G  T  S  V  A  H  I  F  N  *  *  *  P  D  L  K  S  I  L  E  K  T  Q  A  P  C  N  *  S  N  K  S  S  M  R  G  R  G  Y  L  F  F  M  V  T  L  F  S  C  L  *  S  I  H  I  R  K  L  P  S  F  F  F  T  N  K  I  G  A  P  Q  G  D  A  L  G  L  M  K  P  L  L  N  N  S  *  S  W  A  F  N  S  L </second_frame>
            <third_frame>   I  P  *  R  I  D  G  S  S  *  L  T  Q  Q  S  S  L  F  L  T  H  *  *  V  S  P  N  S  S  L  S  Q  S  *  K  D  P  P  S  L  H  P  *  K  P  R  V  P  R  R  T  L  H  L  A  K  T  H  T  *  R  T  W  H  K  A  F  S  P  L  T  F  P  I  P  F  S  N  A  L  H  V  P  S  C  S  L  S  I  P  I  Y  H  Q  *  I  R  S  R  R  G  P  N  M  A  *  K  S  R  S  S  S  S  *  T  Q  Q  G  H  S  *  D  Q  K  T  S  L  Q  I  R  N  A  H  T  S  F  E  K  Q  S  L  A  H  P  L  P  I  F  S  I  D  D  N  R  I  S  S  Q  S  *  R  R  H  K  H  L  V  T  D  R  T  S  H  Q  C  G  E  E  D  T  C  S  L  W  L  P  C  L  V  V  C  S  L  Y  T  F  E  N  S  H  P  S  S  S  Q  T  K  S  E  H  P  K  E  M  H  L  V  *  *  S  L  C  S  T  T  L  E  V  G  L  L  T  P   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0101H16.1" strand="-"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="15970" stop="15731"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>237</number_coding_nucleotides>
                  <number_encoded_amino_acids>79</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VYQYIINKYDHEEVQIWLKNPVHQAHERSRGIRKTKRHHYKFVMPIPRSKSSLWHIRCPYFQLMITGSQVNLREDTSTL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0101H16.1" strand="-"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="16038" stop="15841"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>195</number_coding_nucleotides>
                  <number_encoded_amino_acids>65</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SFFSLNISNTILKCSSCSFLLFEYTNISSINTITKRSKYGLKIPFIKLMNAAGAFVRPKDITTNS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="15375" e_stop="14585"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.924"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.924">
            <gDNA_exon_boundary e_start="15375" e_stop="14585" e_length="791"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15375" stop="14656"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E356614" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15372" stop="14709"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E352401" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15017" stop="14585"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E352180" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ACGAATCCGCTCTTGTGGACTGAAACAAAGTTGAGTGGCATACCTGGATAGTGCACGGAACTTAGCCTCATAAGCATTAACCGACATGCTACCTTGCTCTAGGCTCAGGAACTCATCCCTTTTCCTATCCCTCAAAGTCCGGGGGATATACTTCTCCATAAACAAGCTAGAGAACGAGGCCCAAGTCATAGGTGGTGCCTCTATTGGTTGACACTCAATATGTGACCGCCACCACATTTTGGCGTTCCCTTGAAACTGATAAGTCACAAACTCCACACCAAACCGTTCTACTATACCCATCTTGTGTAGTAGCTCGTGACAGTCAACCAGAAAATCATAAGCATCCTCCGATTCAGCACCCTTGAAGACTGGAGATTTCAATTTCAAGAACTTACTGAAAAGTTCATGCTGATCACTTGTCATTATAGGCCCAGTAGTCAGACGTGGAAACGTGCCTATTTCCAATGGAACATCCATGCGGGGAGCCATAGTAGCCGCATGTTGTACCTCCGGAGCCTGAGGTGCTGGTGCAGAAAACACTGGGGGTATCTGGCCCTGATCAGATAACCCGCTAAGATTAGCCAGAACCCGATTGATCATCTCTGGGGTAGGTTGGGGTGGCATTTCCTCATTCTGCACTTGTTCATTCACCCCATCCTCCCCCTCTCTTATCACTTCCTCAGTCGGTGGAGGAGTCACCGCCCTAGTACCAGATGGGATCGGTGCTCGTCCTCTTCCTCTAGAGGACGTCCTCCCACGACCTCTACCACGGCCCCTTGCCGCTGTTCTTC</gDNA_template>
            <first_frame> T  N  P  L  L  W  T  E  T  K  L  S  G  I  P  G  *  C  T  E  L  S  L  I  S  I  N  R  H  A  T  L  L  *  A  Q  E  L  I  P  F  P  I  P  Q  S  P  G  D  I  L  L  H  K  Q  A  R  E  R  G  P  S  H  R  W  C  L  Y  W  L  T  L  N  M  *  P  P  P  H  F  G  V  P  L  K  L  I  S  H  K  L  H  T  K  P  F  Y  Y  T  H  L  V  *  *  L  V  T  V  N  Q  K  I  I  S  I  L  R  F  S  T  L  E  D  W  R  F  Q  F  Q  E  L  T  E  K  F  M  L  I  T  C  H  Y  R  P  S  S  Q  T  W  K  R  A  Y  F  Q  W  N  I  H  A  G  S  H  S  S  R  M  L  Y  L  R  S  L  R  C  W  C  R  K  H  W  G  Y  L  A  L  I  R  *  P  A  K  I  S  Q  N  P  I  D  H  L  W  G  R  L  G  W  H  F  L  I  L  H  L  F  I  H  P  I  L  P  L  S  Y  H  F  L  S  R  W  R  S  H  R  P  S  T  R  W  D  R  C  S  S  S  S  S  R  G  R  P  P  T  T  S  T  T  A  P  C  R  C  S   </first_frame>
            <second_frame>  R  I  R  S  C  G  L  K  Q  S  *  V  A  Y  L  D  S  A  R  N  L  A  S  *  A  L  T  D  M  L  P  C  S  R  L  R  N  S  S  L  F  L  S  L  K  V  R  G  I  Y  F  S  I  N  K  L  E  N  E  A  Q  V  I  G  G  A  S  I  G  *  H  S  I  C  D  R  H  H  I  L  A  F  P  *  N  *  *  V  T  N  S  T  P  N  R  S  T  I  P  I  L  C  S  S  S  *  Q  S  T  R  K  S  *  A  S  S  D  S  A  P  L  K  T  G  D  F  N  F  K  N  L  L  K  S  S  C  *  S  L  V  I  I  G  P  V  V  R  R  G  N  V  P  I  S  N  G  T  S  M  R  G  A  I  V  A  A  C  C  T  S  G  A  *  G  A  G  A  E  N  T  G  G  I  W  P  *  S  D  N  P  L  R  L  A  R  T  R  L  I  I  S  G  V  G  W  G  G  I  S  S  F  C  T  C  S  F  T  P  S  S  P  S  L  I  T  S  S  V  G  G  G  V  T  A  L  V  P  D  G  I  G  A  R  P  L  P  L  E  D  V  L  P  R  P  L  P  R  P  L  A  A  V  L  </second_frame>
            <third_frame>   E  S  A  L  V  D  *  N  K  V  E  W  H  T  W  I  V  H  G  T  *  P  H  K  H  *  P  T  C  Y  L  A  L  G  S  G  T  H  P  F  S  Y  P  S  K  S  G  G  Y  T  S  P  *  T  S  *  R  T  R  P  K  S  *  V  V  P  L  L  V  D  T  Q  Y  V  T  A  T  T  F  W  R  S  L  E  T  D  K  S  Q  T  P  H  Q  T  V  L  L  Y  P  S  C  V  V  A  R  D  S  Q  P  E  N  H  K  H  P  P  I  Q  H  P  *  R  L  E  I  S  I  S  R  T  Y  *  K  V  H  A  D  H  L  S  L  *  A  Q  *  S  D  V  E  T  C  L  F  P  M  E  H  P  C  G  E  P  *  *  P  H  V  V  P  P  E  P  E  V  L  V  Q  K  T  L  G  V  S  G  P  D  Q  I  T  R  *  D  *  P  E  P  D  *  S  S  L  G  *  V  G  V  A  F  P  H  S  A  L  V  H  S  P  H  P  P  P  L  L  S  L  P  Q  S  V  E  E  S  P  P  *  Y  Q  M  G  S  V  L  V  L  F  L  *  R  T  S  S  H  D  L  Y  H  G  P  L  P  L  F  F </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0101H16.1" strand="-"/>
                <serials PGL_serial="4" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="15063" stop="14809"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>252</number_coding_nucleotides>
                  <number_encoded_amino_acids>84</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LVTVNQKIISILRFSTLEDWRFQFQELTEKFMLITCHYRPSSQTWKRAYFQWNIHAGSHSSRMLYLRSLRCWCRKHWGYLALIR*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0101H16.1" strand="-"/>
                <serials PGL_serial="4" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="14816" stop="14586"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>231</number_coding_nucleotides>
                  <number_encoded_amino_acids>77</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SDNPLRLARTRLIISGVGWGGISSFCTCSFTPSSPSLITSSVGGGVTALVPDGIGARPLPLEDVLPRPLPRPLAAVL</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0101H16.1" strand="-"/>
                <serials PGL_serial="4" AGS_serial="2" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="14808" stop="14587"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>222</number_coding_nucleotides>
                  <number_encoded_amino_acids>74</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PAKISQNPIDHLWGRLGWHFLILHLFIHPILPLSYHFLSRWRSHRPSTRWDRCSSSSSRGRPPTTSTTAPCRCS</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="17715" e_stop="17539"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.932"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.932">
            <gDNA_exon_boundary e_start="17715" e_stop="17539" e_length="177"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17715" stop="17539"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E577888" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CTACATCTCCTCCCATATAATGCTTCAAATGGGGTCATATCAATGCTCGAGTGATAGCTATTATTGTATGAAAATTCCGCTAAGGGTAAGAAGCTATCCCAATGGCCACCAAATTCTATCACACACGCACGGAGCATATCCTCCAACACTTGAATCGTTCGCTCAGACTGACCATCG</gDNA_template>
            <first_frame> L  H  L  L  P  Y  N  A  S  N  G  V  I  S  M  L  E  *  *  L  L  L  Y  E  N  S  A  K  G  K  K  L  S  Q  W  P  P  N  S  I  T  H  A  R  S  I  S  S  N  T  *  I  V  R  S  D  *  P  S </first_frame>
            <second_frame>  Y  I  S  S  H  I  M  L  Q  M  G  S  Y  Q  C  S  S  D  S  Y  Y  C  M  K  I  P  L  R  V  R  S  Y  P  N  G  H  Q  I  L  S  H  T  H  G  A  Y  P  P  T  L  E  S  F  A  Q  T  D  H   </second_frame>
            <third_frame>   T  S  P  P  I  *  C  F  K  W  G  H  I  N  A  R  V  I  A  I  I  V  *  K  F  R  *  G  *  E  A  I  P  M  A  T  K  F  Y  H  T  R  T  E  H  I  L  Q  H  L  N  R  S  L  R  L  T  I  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02SLe0101H16.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="4">
          <exon_coordinates>
            <exon e_start="19827" e_stop="19594"/>
            <exon e_start="19479" e_stop="19322"/>
            <exon e_start="13339" e_stop="13289"/>
            <exon e_start="13203" e_stop="13131"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.940"/>
          <exon-intron don_prob="0.711" acc_prob="0.000" e_score="0.981"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="0.808"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.940">
            <gDNA_exon_boundary e_start="19827" e_stop="19594" e_length="234"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="19593" i_stop="19480" i_length="114"/>
          </intron>
          <exon e_serial="2" e_score="0.981">
            <gDNA_exon_boundary e_start="19479" e_stop="19322" e_length="158"/>
          </exon>
          <intron i_serial="2" don_prob="0.711" acc_prob="0.000">
            <gDNA_intron_boundary i_start="19321" i_stop="13340" i_length="5982"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="13339" e_stop="13289" e_length="51"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="13288" i_stop="13204" i_length="85"/>
          </intron>
          <exon e_serial="4" e_score="0.808">
            <gDNA_exon_boundary e_start="13203" e_stop="13131" e_length="73"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19827" stop="19594"/>
              <exon start="19479" stop="19322"/>
              <exon start="13339" stop="13289"/>
              <exon start="13203" stop="13131"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E242359" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="4" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGTATGTATTAAGCAATATCATAAAATCAACTAATATCCTTAGCATGCAGCATTTACAGTTACCATAACCCTTGGTTACAACACCAAGCACATCAATGAGGACTCACACCTCCTCATCATACTCATTTGGGAATTTAGTTCATTAGATTGGATATTTTAACATATTTCAAGATTCATTATCTTTATTCCCCTCGTGTCGGTACGTGACACTCCGCTCCTCAATATACTATCCTG : GTACCGGAACGTGGCACCCGATCCATATTCTATCCTGGTGTCGGAACGTGACACCCGATCCATATTCTATCCTGGTGTCGGAACGTGACACCCGATCCATATTCTATCCTGGTACCGGAACGTGGCACCCGATCCATATTCTATCCTGGTGTCAGAAC : GTGACACCCGATCCATATTCTATCCTGGTACCGGAACGTGGCACCCGATCC : CATCAATCCCATTACTTTAATTCATCAAGCCTTCTTCTATACCAAGGCATCATCATTAATAATGTATATTAAA</gDNA_template>
            <first_frame> S  M  Y  *  A  I  S  *  N  Q  L  I  S  L  A  C  S  I  Y  S  Y  H  N  P  W  L  Q  H  Q  A  H  Q  *  G  L  T  P  P  H  H  T  H  L  G  I  *  F  I  R  L  D  I  L  T  Y  F  K  I  H  Y  L  Y  S  P  R  V  G  T  *  H  S  A  P  Q  Y  T  I  L  :  V  P  E  R  G  T  R  S  I  F  Y  P  G  V  G  T  *  H  P  I  H  I  L  S  W  C  R  N  V  T  P  D  P  Y  S  I  L  V  P  E  R  G  T  R  S  I  F  Y  P  G  V  R  T :   *  H  P  I  H  I  L  S  W  Y  R  N  V  A  P  D  P :   I  N  P  I  T  L  I  H  Q  A  F  F  Y  T  K  A  S  S  L  I  M  Y  I  K </first_frame>
            <second_frame>  V  C  I  K  Q  Y  H  K  I  N  *  Y  P  *  H  A  A  F  T  V  T  I  T  L  G  Y  N  T  K  H  I  N  E  D  S  H  L  L  I  I  L  I  W  E  F  S  S  L  D  W  I  F  *  H  I  S  R  F  I  I  F  I  P  L  V  S  V  R  D  T  P  L  L  N  I  L  S  W :   Y  R  N  V  A  P  D  P  Y  S  I  L  V  S  E  R  D  T  R  S  I  F  Y  P  G  V  G  T  *  H  P  I  H  I  L  S  W  Y  R  N  V  A  P  D  P  Y  S  I  L  V  S  E   : R  D  T  R  S  I  F  Y  P  G  T  G  T  W  H  P  I   : P  S  I  P  L  L  *  F  I  K  P  S  S  I  P  R  H  H  H  *  *  C  I  L   </second_frame>
            <third_frame>   Y  V  L  S  N  I  I  K  S  T  N  I  L  S  M  Q  H  L  Q  L  P  *  P  L  V  T  T  P  S  T  S  M  R  T  H  T  S  S  S  Y  S  F  G  N  L  V  H  *  I  G  Y  F  N  I  F  Q  D  S  L  S  L  F  P  S  C  R  Y  V  T  L  R  S  S  I  Y  Y  P   : G  T  G  T  W  H  P  I  H  I  L  S  W  C  R  N  V  T  P  D  P  Y  S  I  L  V  S  E  R  D  T  R  S  I  F  Y  P  G  T  G  T  W  H  P  I  H  I  L  S  W  C  Q  N  :  V  T  P  D  P  Y  S  I  L  V  P  E  R  G  T  R  S  :  H  Q  S  H  Y  F  N  S  S  S  L  L  L  Y  Q  G  I  I  I  N  N  V  Y  *  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0101H16.1" strand="-"/>
                <serials PGL_serial="4" AGS_serial="4" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="19681" stop="19594"/>
                    <exon start="19479" stop="19322"/>
                    <exon start="13339" stop="13289"/>
                    <exon start="13203" stop="13132"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>366</number_coding_nucleotides>
                  <number_encoded_amino_acids>122</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IGYFNIFQDSLSLFPSCRYVTLRSSIYYPGTGTWHPIHILSWCRNVTPDPYSILVSERDTRSIFYPGTGTWHPIHILSWCQNVTPDPYSILVPERGTRSHQSHYFNSSSLLLYQGIIINNVY*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="+" PGL_start="13627" PGL_stop="14578"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="13627" e_stop="14578"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.944"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.944">
            <gDNA_exon_boundary e_start="13627" e_stop="14578" e_length="952"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="13627" stop="13862"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E209683" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="13787" stop="14520"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E351546" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="13787" stop="14445"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E356696" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="13787" stop="14370"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E356206" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="14293" stop="14578"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E355114" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TAATGAACTAAATTTCCAAATGAGTATGATGAGGAGGTGTGAGTCCTCATTGATGTGCTTGGTGTTGTAACCAAGGGTTATGGTAACTGTAAATGCTGCATGCTAAGGATATTAGTTGATTTTATGATATTGCTTAATACATACTGTTTTCTATTTTGAGTTGGCCGATGATATCTACTCAGTACCCGTGTTTTGTACTGACCCCTACTTTTATGTTTTTCTTGTTGTTATTTGTGGAGTGCAGCAAACGTGCCGTCATCTTCGACTCAACAGTAACTCAAGCCAGTCTTCGTCACACCGGATCTTCAGGGTGAGCTAACGCTTTTAGCTTGGACTGGATCTTCTCCTTCATGTCTTGATGCCTTGAACTTCCGGCATGGACTAGCTTCTTATGTATTTTTAGCTTCTTAGAAACTCTTAGAATTAGTAGTTGAAAGTAGATGTTCTTGTGATGATGACTTCCAGGTTTTGGGAATAATAGATGTTGAATATTGATAGTTATTGAATTGGTTTTTATTAATGAGTTTAAGTCTTTCGCATTACTTTCTGTTGTTATTACATTGAAATGTTAAGGTTTAGATTGGTTGGTTCGCTCACATAGGAGGGTAAGTGTGGGTGCCAGTCGCGGCCTGGATTTGGGTCGTGACAAAACTTGGTATCAGAGCATTAGGTTCGTTGGTCTCATCACACAAGAACAGGTCTAGTAGGGTCTTAAGGAACGGTAGGGGGATGCCTTTACTTTTCCTTGAGAGGCTATAAGACTTTAGGAAAATTCCATTCTTTCATTCTTTCTTTCGTGCTACTACTTGAGTCCAATTGGTATCTAGGCGATACGAATTGGTATCTGACCATCTTCACTCTATTTCGCGGATGGTTAGAACTAGAGCAACGACTGCGCCAACACCAACATCGGCAAGACAAGAAGCGTCTGAGCCAGCCACTGGGGCTGTGG</gDNA_template>
            <first_frame> *  *  T  K  F  P  N  E  Y  D  E  E  V  *  V  L  I  D  V  L  G  V  V  T  K  G  Y  G  N  C  K  C  C  M  L  R  I  L  V  D  F  M  I  L  L  N  T  Y  C  F  L  F  *  V  G  R  *  Y  L  L  S  T  R  V  L  Y  *  P  L  L  L  C  F  S  C  C  Y  L  W  S  A  A  N  V  P  S  S  S  T  Q  Q  *  L  K  P  V  F  V  T  P  D  L  Q  G  E  L  T  L  L  A  W  T  G  S  S  P  S  C  L  D  A  L  N  F  R  H  G  L  A  S  Y  V  F  L  A  S  *  K  L  L  E  L  V  V  E  S  R  C  S  C  D  D  D  F  Q  V  L  G  I  I  D  V  E  Y  *  *  L  L  N  W  F  L  L  M  S  L  S  L  S  H  Y  F  L  L  L  L  H  *  N  V  K  V  *  I  G  W  F  A  H  I  G  G  *  V  W  V  P  V  A  A  W  I  W  V  V  T  K  L  G  I  R  A  L  G  S  L  V  S  S  H  K  N  R  S  S  R  V  L  R  N  G  R  G  M  P  L  L  F  L  E  R  L  *  D  F  R  K  I  P  F  F  H  S  F  F  R  A  T  T  *  V  Q  L  V  S  R  R  Y  E  L  V  S  D  H  L  H  S  I  S  R  M  V  R  T  R  A  T  T  A  P  T  P  T  S  A  R  Q  E  A  S  E  P  A  T  G  A  V  </first_frame>
            <second_frame>  N  E  L  N  F  Q  M  S  M  M  R  R  C  E  S  S  L  M  C  L  V  L  *  P  R  V  M  V  T  V  N  A  A  C  *  G  Y  *  L  I  L  *  Y  C  L  I  H  T  V  F  Y  F  E  L  A  D  D  I  Y  S  V  P  V  F  C  T  D  P  Y  F  Y  V  F  L  V  V  I  C  G  V  Q  Q  T  C  R  H  L  R  L  N  S  N  S  S  Q  S  S  S  H  R  I  F  R  V  S  *  R  F  *  L  G  L  D  L  L  L  H  V  L  M  P  *  T  S  G  M  D  *  L  L  M  Y  F  *  L  L  R  N  S  *  N  *  *  L  K  V  D  V  L  V  M  M  T  S  R  F  W  E  *  *  M  L  N  I  D  S  Y  *  I  G  F  Y  *  *  V  *  V  F  R  I  T  F  C  C  Y  Y  I  E  M  L  R  F  R  L  V  G  S  L  T  *  E  G  K  C  G  C  Q  S  R  P  G  F  G  S  *  Q  N  L  V  S  E  H  *  V  R  W  S  H  H  T  R  T  G  L  V  G  S  *  G  T  V  G  G  C  L  Y  F  S  L  R  G  Y  K  T  L  G  K  F  H  S  F  I  L  S  F  V  L  L  L  E  S  N  W  Y  L  G  D  T  N  W  Y  L  T  I  F  T  L  F  R  G  W  L  E  L  E  Q  R  L  R  Q  H  Q  H  R  Q  D  K  K  R  L  S  Q  P  L  G  L  W </second_frame>
            <third_frame>   M  N  *  I  S  K  *  V  *  *  G  G  V  S  P  H  *  C  A  W  C  C  N  Q  G  L  W  *  L  *  M  L  H  A  K  D  I  S  *  F  Y  D  I  A  *  Y  I  L  F  S  I  L  S  W  P  M  I  S  T  Q  Y  P  C  F  V  L  T  P  T  F  M  F  F  L  L  L  F  V  E  C  S  K  R  A  V  I  F  D  S  T  V  T  Q  A  S  L  R  H  T  G  S  S  G  *  A  N  A  F  S  L  D  W  I  F  S  F  M  S  *  C  L  E  L  P  A  W  T  S  F  L  C  I  F  S  F  L  E  T  L  R  I  S  S  *  K  *  M  F  L  *  *  *  L  P  G  F  G  N  N  R  C  *  I  L  I  V  I  E  L  V  F  I  N  E  F  K  S  F  A  L  L  S  V  V  I  T  L  K  C  *  G  L  D  W  L  V  R  S  H  R  R  V  S  V  G  A  S  R  G  L  D  L  G  R  D  K  T  W  Y  Q  S  I  R  F  V  G  L  I  T  Q  E  Q  V  *  *  G  L  K  E  R  *  G  D  A  F  T  F  P  *  E  A  I  R  L  *  E  N  S  I  L  S  F  F  L  S  C  Y  Y  L  S  P  I  G  I  *  A  I  R  I  G  I  *  P  S  S  L  Y  F  A  D  G  *  N  *  S  N  D  C  A  N  T  N  I  G  K  T  R  S  V  *  A  S  H  W  G  C   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0101H16.1" strand="+"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="14342" stop="14578"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>237</number_coding_nucleotides>
                  <number_encoded_amino_acids>79</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GTVGGCLYFSLRGYKTLGKFHSFILSFVLLLESNWYLGDTNWYLTIFTLFRGWLELEQRLRQHQHRQDKKRLSQPLGLW</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="+" PGL_start="14652" PGL_stop="15205"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="14652" e_stop="15205"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.915"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.915">
            <gDNA_exon_boundary e_start="14652" e_stop="15205" e_length="554"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="14652" stop="15205"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E329287" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ACCGATCCCATCTGGTACTAGGGCGGTGACTCCTCCACCGACTGAGGAAGTGATAAGAGAGGGGGAGGATGGGGTGAATGAACAAGTGCAGAATGAGGAAATGCCACCCCAACCTACCCCAGAGATGATCAATCGGGTTCTGGCTAATCTTAGCGGGTTATCTGATCAGGGCCAGATACCCCCAGTGTTTTCTGCACCAGCACCTCAGGCTCCGGAGGTACAACATGCGGCTACTATGGCTCCCCGCATGGATGTTCCATTGGAAATAGGCACGTTTCCACGTCTGACTACTGGGCCTATAATGACAAGTGATCAGCATGAACTTTTCAGTAAGTTCTTGAAATTGAAATCTCCAGTCTTCAAGGGTGCTGAATCGGAGGATGCTTATGATTTTCTGGTTGACTGTCACGAGCTACTACACAAGATGGGTATAGTAGAACGGTTTGGTGTGGAGTTTGTGACTTATCAGTTTCAAGGGAACGCCAAAATGTGGTGGCGGTCACATATTGAGTGTCAACCAATAGAGGCACCACCTATGACTTGGGCCTCGTTCT</gDNA_template>
            <first_frame> T  D  P  I  W  Y  *  G  G  D  S  S  T  D  *  G  S  D  K  R  G  G  G  W  G  E  *  T  S  A  E  *  G  N  A  T  P  T  Y  P  R  D  D  Q  S  G  S  G  *  S  *  R  V  I  *  S  G  P  D  T  P  S  V  F  C  T  S  T  S  G  S  G  G  T  T  C  G  Y  Y  G  S  P  H  G  C  S  I  G  N  R  H  V  S  T  S  D  Y  W  A  Y  N  D  K  *  S  A  *  T  F  Q  *  V  L  E  I  E  I  S  S  L  Q  G  C  *  I  G  G  C  L  *  F  S  G  *  L  S  R  A  T  T  Q  D  G  Y  S  R  T  V  W  C  G  V  C  D  L  S  V  S  R  E  R  Q  N  V  V  A  V  T  Y  *  V  S  T  N  R  G  T  T  Y  D  L  G  L  V   </first_frame>
            <second_frame>  P  I  P  S  G  T  R  A  V  T  P  P  P  T  E  E  V  I  R  E  G  E  D  G  V  N  E  Q  V  Q  N  E  E  M  P  P  Q  P  T  P  E  M  I  N  R  V  L  A  N  L  S  G  L  S  D  Q  G  Q  I  P  P  V  F  S  A  P  A  P  Q  A  P  E  V  Q  H  A  A  T  M  A  P  R  M  D  V  P  L  E  I  G  T  F  P  R  L  T  T  G  P  I  M  T  S  D  Q  H  E  L  F  S  K  F  L  K  L  K  S  P  V  F  K  G  A  E  S  E  D  A  Y  D  F  L  V  D  C  H  E  L  L  H  K  M  G  I  V  E  R  F  G  V  E  F  V  T  Y  Q  F  Q  G  N  A  K  M  W  W  R  S  H  I  E  C  Q  P  I  E  A  P  P  M  T  W  A  S  F  </second_frame>
            <third_frame>   R  S  H  L  V  L  G  R  *  L  L  H  R  L  R  K  *  *  E  R  G  R  M  G  *  M  N  K  C  R  M  R  K  C  H  P  N  L  P  Q  R  *  S  I  G  F  W  L  I  L  A  G  Y  L  I  R  A  R  Y  P  Q  C  F  L  H  Q  H  L  R  L  R  R  Y  N  M  R  L  L  W  L  P  A  W  M  F  H  W  K  *  A  R  F  H  V  *  L  L  G  L  *  *  Q  V  I  S  M  N  F  S  V  S  S  *  N  *  N  L  Q  S  S  R  V  L  N  R  R  M  L  M  I  F  W  L  T  V  T  S  Y  Y  T  R  W  V  *  *  N  G  L  V  W  S  L  *  L  I  S  F  K  G  T  P  K  C  G  G  G  H  I  L  S  V  N  Q  *  R  H  H  L  *  L  G  P  R  S </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0101H16.1" strand="+"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="14653" stop="15204"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>552</number_coding_nucleotides>
                  <number_encoded_amino_acids>184</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PIPSGTRAVTPPPTEEVIREGEDGVNEQVQNEEMPPQPTPEMINRVLANLSGLSDQGQIPPVFSAPAPQAPEVQHAATMAPRMDVPLEIGTFPRLTTGPIMTSDQHELFSKFLKLKSPVFKGAESEDAYDFLVDCHELLHKMGIVERFGVEFVTYQFQGNAKMWWRSHIECQPIEAPPMTWASF</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="+" PGL_start="17776" PGL_stop="18538"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="17776" e_stop="18538"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.902"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.902">
            <gDNA_exon_boundary e_start="17776" e_stop="18538" e_length="763"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17776" stop="18538"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E354383" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GGATTCGATGGAAAAAGTGAAGTCTATTCAAGAAAAGCTGTTAGCGGCGCAAAGTAGACAAAAAGAATATGCAGATCGAAAGGTTAGAGACTTAGAGTTCATGGAAGGTGAACAAGTCTTGTTGAAAGTTTCGCCAATGAAAGGGGTGATGCGATTTGGAAAAAGGGGTAAGCTAAGTCCAAGGTACATTGGTCCCTTTGAAGTACTAAAGCGAGTAGGAGAGGTGGCTTATGAGTTAGCCTTGCCTCCAGGGCTGTCCGGAGTACATCCGGTATTCCATGTGTCTATGTTGAAAAGATACCACGGAGATGGAAACTACATTATCCGTTGGGATTCAGTTTTGCTTGATGAGAACTTGTCTTATGAGGAGGAGCCTGTTGCTATTTTAGATAGAGAAGTTCGCAAGTTGAGGTCAAGAGAGATTGCATTCATCAATGTGCAATGGAAGAATCGACCGTTTGAAGAAGCCACTTGGGAGAAGGAGGCGGATATGCGAGAAAAATACCCACATCTGTTTACAGATTCAGGTACTCCTTTTCGCCCTTGTTTTCCTTCCTTTGATCGTTCGGGGACGAACGATGGGTAAATTGGTATCTAATGTAACGACCCGTTTAGTCGTTTTGAGCAACAGACTTCAATTCTGGAAAAACTGGCAGAAGCGACGGACCCCACGACGGAACGTCATGGGCACGACGGACCGTCGCAGGGTCTCGTTTCAAAACACTTAGAAAATCTGAAATTGGGTACTGAAAATCGACTCTCT</gDNA_template>
            <first_frame> G  F  D  G  K  S  E  V  Y  S  R  K  A  V  S  G  A  K  *  T  K  R  I  C  R  S  K  G  *  R  L  R  V  H  G  R  *  T  S  L  V  E  S  F  A  N  E  R  G  D  A  I  W  K  K  G  *  A  K  S  K  V  H  W  S  L  *  S  T  K  A  S  R  R  G  G  L  *  V  S  L  A  S  R  A  V  R  S  T  S  G  I  P  C  V  Y  V  E  K  I  P  R  R  W  K  L  H  Y  P  L  G  F  S  F  A  *  *  E  L  V  L  *  G  G  A  C  C  Y  F  R  *  R  S  S  Q  V  E  V  K  R  D  C  I  H  Q  C  A  M  E  E  S  T  V  *  R  S  H  L  G  E  G  G  G  Y  A  R  K  I  P  T  S  V  Y  R  F  R  Y  S  F  S  P  L  F  S  F  L  *  S  F  G  D  E  R  W  V  N  W  Y  L  M  *  R  P  V  *  S  F  *  A  T  D  F  N  S  G  K  T  G  R  S  D  G  P  H  D  G  T  S  W  A  R  R  T  V  A  G  S  R  F  K  T  L  R  K  S  E  I  G  Y  *  K  S  T  L  </first_frame>
            <second_frame>  D  S  M  E  K  V  K  S  I  Q  E  K  L  L  A  A  Q  S  R  Q  K  E  Y  A  D  R  K  V  R  D  L  E  F  M  E  G  E  Q  V  L  L  K  V  S  P  M  K  G  V  M  R  F  G  K  R  G  K  L  S  P  R  Y  I  G  P  F  E  V  L  K  R  V  G  E  V  A  Y  E  L  A  L  P  P  G  L  S  G  V  H  P  V  F  H  V  S  M  L  K  R  Y  H  G  D  G  N  Y  I  I  R  W  D  S  V  L  L  D  E  N  L  S  Y  E  E  E  P  V  A  I  L  D  R  E  V  R  K  L  R  S  R  E  I  A  F  I  N  V  Q  W  K  N  R  P  F  E  E  A  T  W  E  K  E  A  D  M  R  E  K  Y  P  H  L  F  T  D  S  G  T  P  F  R  P  C  F  P  S  F  D  R  S  G  T  N  D  G  *  I  G  I  *  C  N  D  P  F  S  R  F  E  Q  Q  T  S  I  L  E  K  L  A  E  A  T  D  P  T  T  E  R  H  G  H  D  G  P  S  Q  G  L  V  S  K  H  L  E  N  L  K  L  G  T  E  N  R  L  S </second_frame>
            <third_frame>   I  R  W  K  K  *  S  L  F  K  K  S  C  *  R  R  K  V  D  K  K  N  M  Q  I  E  R  L  E  T  *  S  S  W  K  V  N  K  S  C  *  K  F  R  Q  *  K  G  *  C  D  L  E  K  G  V  S  *  V  Q  G  T  L  V  P  L  K  Y  *  S  E  *  E  R  W  L  M  S  *  P  C  L  Q  G  C  P  E  Y  I  R  Y  S  M  C  L  C  *  K  D  T  T  E  M  E  T  T  L  S  V  G  I  Q  F  C  L  M  R  T  C  L  M  R  R  S  L  L  L  F  *  I  E  K  F  A  S  *  G  Q  E  R  L  H  S  S  M  C  N  G  R  I  D  R  L  K  K  P  L  G  R  R  R  R  I  C  E  K  N  T  H  I  C  L  Q  I  Q  V  L  L  F  A  L  V  F  L  P  L  I  V  R  G  R  T  M  G  K  L  V  S  N  V  T  T  R  L  V  V  L  S  N  R  L  Q  F  W  K  N  W  Q  K  R  R  T  P  R  R  N  V  M  G  T  T  D  R  R  R  V  S  F  Q  N  T  *  K  I  *  N  W  V  L  K  I  D  S   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0101H16.1" strand="+"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="17777" stop="18361"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>582</number_coding_nucleotides>
                  <number_encoded_amino_acids>194</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DSMEKVKSIQEKLLAAQSRQKEYADRKVRDLEFMEGEQVLLKVSPMKGVMRFGKRGKLSPRYIGPFEVLKRVGEVAYELALPPGLSGVHPVFHVSMLKRYHGDGNYIIRWDSVLLDENLSYEEEPVAILDREVRKLRSREIAFINVQWKNRPFEEATWEKEADMREKYPHLFTDSGTPFRPCFPSFDRSGTNDG*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="-" PGL_start="25309" PGL_stop="25140"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="25309" e_stop="25140"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.935"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.935">
            <gDNA_exon_boundary e_start="25309" e_stop="25140" e_length="170"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25309" stop="25140"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E737838" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25293" stop="25140"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E735675" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25293" stop="25140"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E735427" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TGAACGTTCTAATGAATTGTTGTAGATTCCATCTAAGAATTGTATTATCTTATGAATGCTACATGGTTGGTTTTAGTTATAATTGCAAACATCGAAATTTCAAAATATAAGACCGCGATTTCGCCAAATTTTTATTGCAATAATTATCAGTATTATGTGGCATTGGAGAT</gDNA_template>
            <first_frame> *  T  F  *  *  I  V  V  D  S  I  *  E  L  Y  Y  L  M  N  A  T  W  L  V  L  V  I  I  A  N  I  E  I  S  K  Y  K  T  A  I  S  P  N  F  Y  C  N  N  Y  Q  Y  Y  V  A  L  E   </first_frame>
            <second_frame>  E  R  S  N  E  L  L  *  I  P  S  K  N  C  I  I  L  *  M  L  H  G  W  F  *  L  *  L  Q  T  S  K  F  Q  N  I  R  P  R  F  R  Q  I  F  I  A  I  I  I  S  I  M  W  H  W  R  </second_frame>
            <third_frame>   N  V  L  M  N  C  C  R  F  H  L  R  I  V  L  S  Y  E  C  Y  M  V  G  F  S  Y  N  C  K  H  R  N  F  K  I  *  D  R  D  F  A  K  F  L  L  Q  *  L  S  V  L  C  G  I  G  D </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02SLe0101H16.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="-" PGL_start="29401" PGL_stop="25433"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="29401" e_stop="29345"/>
            <exon e_start="29069" e_stop="28947"/>
            <exon e_start="28583" e_stop="28508"/>
            <exon e_start="27365" e_stop="26683"/>
            <exon e_start="25670" e_stop="25606"/>
            <exon e_start="25472" e_stop="25433"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.953" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.927" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.770" acc_prob="0.987" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="29401" e_stop="29345" e_length="57"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.995">
            <gDNA_intron_boundary i_start="29344" i_stop="29070" i_length="275"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="29069" e_stop="28947" e_length="123"/>
          </exon>
          <intron i_serial="2" don_prob="0.953" acc_prob="0.997">
            <gDNA_intron_boundary i_start="28946" i_stop="28584" i_length="363"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="28583" e_stop="28508" e_length="76"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="0.927">
            <gDNA_intron_boundary i_start="28507" i_stop="27366" i_length="1142"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="27365" e_stop="26683" e_length="683"/>
          </exon>
          <intron i_serial="4" don_prob="0.000" acc_prob="0.999">
            <gDNA_intron_boundary i_start="26682" i_stop="25671" i_length="1012"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="25670" e_stop="25606" e_length="65"/>
          </exon>
          <intron i_serial="5" don_prob="0.770" acc_prob="0.987">
            <gDNA_intron_boundary i_start="25605" i_stop="25473" i_length="133"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="25472" e_stop="25433" e_length="40"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29401" stop="29345"/>
              <exon start="29069" stop="28947"/>
              <exon start="28583" stop="28508"/>
              <exon start="27365" stop="26764"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E704311" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28961" stop="28947"/>
              <exon start="28583" stop="28508"/>
              <exon start="27365" stop="26683"/>
              <exon start="25670" stop="25606"/>
              <exon start="25472" stop="25433"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E702841" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ACATGATCCATTTGGCGGACAAGGTTTTATGCTGCCTTTCGGTCCTCCGATGCAGAG : GGACCTTGCAGCAGACTTTGGGATGGGATTTAATGCTGGCCCACCAATCATGAGTAGAGAAGAATTTGAGGCTAGAAAGGCTGATCTGAGAAGGAAACGTGAGAGCGAGAGACGTGGAGAGAG : GGAGTTCCCTAAAGACAGGGAGCATGCAAGGGATGTTGGGAGCACTGCTGATGGTCCTTCCCTGAAACCCAAATCT : AAAGCTCCGTCGAGCTCGAGCCGTCCCCGCCAACCTGAGAGGCCTTCCCCAGACCTTGACCACCGCGTTGATGACCACCGCCGACCTGAGAGACCATCGCCAGATCTTGACCACCGCCGCCGAGCTGAGAGGCCATCGCCAGACCTTGACCACCGCCGCCGATCTGAGAGGCCATCGCCAGACCATGATTACCCCCGCCGACCTGAGAGGCTGTCTCCAGATCGCCGATTGCGTGACCCTGAACTTCCTCGCCCTTCTTCCAAGAAAAAGTATGAAGATTATGACGATCATCACCATGAGGACCGCCACCGCCATGAGGACCGCCATCAGCGCGGTACCCATCGCAGTAGCAGTAGCCATCACCGTTCAGAATCTTCAGCTAACGCCAAACCATCCTCCGTAGGCCCATCTGAACCGCAATCCAAATCCGTTGATAAGAGGAAGGCCAGTGTTTTTTCTCGTATCAGTTTCCCAGCCGAAGATTCAGCAGCAGCTTCAAAGAAGCGAAAGGTGCCATCCTCGAGTGAAGTACCAGTGAGTTCTTCAGCGAGCCACAGGGGTGGCACAACGAATGGGTATCATGGGGAGTACAAAACGACTACTGGATCAAGGAAGAGTGCCACTGTGAGTGTGGATTACGAGAGTAGTGATGATGATCGGCACTTCAAAAGAAAGCCTTCAAG : GTTGAGATAGTATATGATGATGGGGTGACTGGATCAAAAAGAATCTTGCATGGATATAAATACAG : ATTCAGAATGCGCGGGCATCTTTTTAACATTCAAATCTGG</gDNA_template>
            <first_frame> T  *  S  I  W  R  T  R  F  Y  A  A  F  R  S  S  D  A  E  :  G  P  C  S  R  L  W  D  G  I  *  C  W  P  T  N  H  E  *  R  R  I  *  G  *  K  G  *  S  E  K  E  T  *  E  R  E  T  W  R  E  :  G  V  P  *  R  Q  G  A  C  K  G  C  W  E  H  C  *  W  S  F  P  E  T  Q  I   : *  S  S  V  E  L  E  P  S  P  P  T  *  E  A  F  P  R  P  *  P  P  R  *  *  P  P  P  T  *  E  T  I  A  R  S  *  P  P  P  P  S  *  E  A  I  A  R  P  *  P  P  P  P  I  *  E  A  I  A  R  P  *  L  P  P  P  T  *  E  A  V  S  R  S  P  I  A  *  P  *  T  S  S  P  F  F  Q  E  K  V  *  R  L  *  R  S  S  P  *  G  P  P  P  P  *  G  P  P  S  A  R  Y  P  S  Q  *  Q  *  P  S  P  F  R  I  F  S  *  R  Q  T  I  L  R  R  P  I  *  T  A  I  Q  I  R  *  *  E  E  G  Q  C  F  F  S  Y  Q  F  P  S  R  R  F  S  S  S  F  K  E  A  K  G  A  I  L  E  *  S  T  S  E  F  F  S  E  P  Q  G  W  H  N  E  W  V  S  W  G  V  Q  N  D  Y  W  I  K  E  E  C  H  C  E  C  G  L  R  E  *  *  *  *  S  A  L  Q  K  K  A  F  K  :  V  E  I  V  Y  D  D  G  V  T  G  S  K  R  I  L  H  G  Y  K  Y  R :   F  R  M  R  G  H  L  F  N  I  Q  I  W </first_frame>
            <second_frame>  H  D  P  F  G  G  Q  G  F  M  L  P  F  G  P  P  M  Q  R :   D  L  A  A  D  F  G  M  G  F  N  A  G  P  P  I  M  S  R  E  E  F  E  A  R  K  A  D  L  R  R  K  R  E  S  E  R  R  G  E  R :   E  F  P  K  D  R  E  H  A  R  D  V  G  S  T  A  D  G  P  S  L  K  P  K  S  :  K  A  P  S  S  S  S  R  P  R  Q  P  E  R  P  S  P  D  L  D  H  R  V  D  D  H  R  R  P  E  R  P  S  P  D  L  D  H  R  R  R  A  E  R  P  S  P  D  L  D  H  R  R  R  S  E  R  P  S  P  D  H  D  Y  P  R  R  P  E  R  L  S  P  D  R  R  L  R  D  P  E  L  P  R  P  S  S  K  K  K  Y  E  D  Y  D  D  H  H  H  E  D  R  H  R  H  E  D  R  H  Q  R  G  T  H  R  S  S  S  S  H  H  R  S  E  S  S  A  N  A  K  P  S  S  V  G  P  S  E  P  Q  S  K  S  V  D  K  R  K  A  S  V  F  S  R  I  S  F  P  A  E  D  S  A  A  A  S  K  K  R  K  V  P  S  S  S  E  V  P  V  S  S  S  A  S  H  R  G  G  T  T  N  G  Y  H  G  E  Y  K  T  T  T  G  S  R  K  S  A  T  V  S  V  D  Y  E  S  S  D  D  D  R  H  F  K  R  K  P  S  R :   L  R  *  Y  M  M  M  G  *  L  D  Q  K  E  S  C  M  D  I  N  T   : D  S  E  C  A  G  I  F  L  T  F  K  S   </second_frame>
            <third_frame>   M  I  H  L  A  D  K  V  L  C  C  L  S  V  L  R  C  R   : G  T  L  Q  Q  T  L  G  W  D  L  M  L  A  H  Q  S  *  V  E  K  N  L  R  L  E  R  L  I  *  E  G  N  V  R  A  R  D  V  E  R   : G  S  S  L  K  T  G  S  M  Q  G  M  L  G  A  L  L  M  V  L  P  *  N  P  N  L :   K  L  R  R  A  R  A  V  P  A  N  L  R  G  L  P  Q  T  L  T  T  A  L  M  T  T  A  D  L  R  D  H  R  Q  I  L  T  T  A  A  E  L  R  G  H  R  Q  T  L  T  T  A  A  D  L  R  G  H  R  Q  T  M  I  T  P  A  D  L  R  G  C  L  Q  I  A  D  C  V  T  L  N  F  L  A  L  L  P  R  K  S  M  K  I  M  T  I  I  T  M  R  T  A  T  A  M  R  T  A  I  S  A  V  P  I  A  V  A  V  A  I  T  V  Q  N  L  Q  L  T  P  N  H  P  P  *  A  H  L  N  R  N  P  N  P  L  I  R  G  R  P  V  F  F  L  V  S  V  S  Q  P  K  I  Q  Q  Q  L  Q  R  S  E  R  C  H  P  R  V  K  Y  Q  *  V  L  Q  R  A  T  G  V  A  Q  R  M  G  I  M  G  S  T  K  R  L  L  D  Q  G  R  V  P  L  *  V  W  I  T  R  V  V  M  M  I  G  T  S  K  E  S  L  Q   : G  *  D  S  I  *  *  W  G  D  W  I  K  K  N  L  A  W  I  *  I  Q  :  I  Q  N  A  R  A  S  F  *  H  S  N  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0101H16.1" strand="-"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="29400" stop="29345"/>
                    <exon start="29069" stop="28947"/>
                    <exon start="28583" stop="28508"/>
                    <exon start="27365" stop="26683"/>
                    <exon start="25670" stop="25661"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>945</number_coding_nucleotides>
                  <number_encoded_amino_acids>315</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>HDPFGGQGFMLPFGPPMQRDLAADFGMGFNAGPPIMSREEFEARKADLRRKRESERRGEREFPKDREHARDVGSTADGPSLKPKSKAPSSSSRPRQPERPSPDLDHRVDDHRRPERPSPDLDHRRRAERPSPDLDHRRRSERPSPDHDYPRRPERLSPDRRLRDPELPRPSSKKKYEDYDDHHHEDRHRHEDRHQRGTHRSSSSHHRSESSANAKPSSVGPSEPQSKSVDKRKASVFSRISFPAEDSAAASKKRKVPSSSEVPVSSSASHRGGTTNGYHGEYKTTTGSRKSATVSVDYESSDDDRHFKRKPSRLR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="-" PGL_start="30998" PGL_stop="29564"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="30998" e_stop="30936"/>
            <exon e_start="30859" e_stop="30711"/>
            <exon e_start="30525" e_stop="30361"/>
            <exon e_start="30255" e_stop="29941"/>
            <exon e_start="29794" e_stop="29753"/>
            <exon e_start="29611" e_stop="29564"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.862" acc_prob="0.765" e_score="1.000"/>
          <exon-intron don_prob="0.101" acc_prob="0.738" e_score="1.000"/>
          <exon-intron don_prob="0.971" acc_prob="0.988" e_score="1.000"/>
          <exon-intron don_prob="0.307" acc_prob="0.991" e_score="0.997"/>
          <exon-intron don_prob="0.994" acc_prob="0.987" e_score="0.952"/>
          <exon-only e_score="0.958"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="30998" e_stop="30936" e_length="63"/>
          </exon>
          <intron i_serial="1" don_prob="0.862" acc_prob="0.765">
            <gDNA_intron_boundary i_start="30935" i_stop="30860" i_length="76"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="30859" e_stop="30711" e_length="149"/>
          </exon>
          <intron i_serial="2" don_prob="0.101" acc_prob="0.738">
            <gDNA_intron_boundary i_start="30710" i_stop="30526" i_length="185"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="30525" e_stop="30361" e_length="165"/>
          </exon>
          <intron i_serial="3" don_prob="0.971" acc_prob="0.988">
            <gDNA_intron_boundary i_start="30360" i_stop="30256" i_length="105"/>
          </intron>
          <exon e_serial="4" e_score="0.997">
            <gDNA_exon_boundary e_start="30255" e_stop="29941" e_length="315"/>
          </exon>
          <intron i_serial="4" don_prob="0.307" acc_prob="0.991">
            <gDNA_intron_boundary i_start="29940" i_stop="29795" i_length="146"/>
          </intron>
          <exon e_serial="5" e_score="0.952">
            <gDNA_exon_boundary e_start="29794" e_stop="29753" e_length="42"/>
          </exon>
          <intron i_serial="5" don_prob="0.994" acc_prob="0.987">
            <gDNA_intron_boundary i_start="29752" i_stop="29612" i_length="141"/>
          </intron>
          <exon e_serial="6" e_score="0.958">
            <gDNA_exon_boundary e_start="29611" e_stop="29564" e_length="48"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30998" stop="30936"/>
              <exon start="30859" stop="30711"/>
              <exon start="30525" stop="30361"/>
              <exon start="30255" stop="29941"/>
              <exon start="29794" stop="29753"/>
              <exon start="29611" stop="29564"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E705238" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30244" stop="29941"/>
              <exon start="29794" stop="29780"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E215337" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30195" stop="29941"/>
              <exon start="29794" stop="29769"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E219626" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30159" stop="29941"/>
              <exon start="29794" stop="29769"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E233884" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30128" stop="29941"/>
              <exon start="29794" stop="29779"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E541561" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30128" stop="29941"/>
              <exon start="29794" stop="29779"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E548569" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30127" stop="29941"/>
              <exon start="29794" stop="29777"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E298402" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GGCAACCCCAGATGGTTCATATGCTTTACCAAGTGGTGCCAGTGCTGTTTTAAAGCCCAATGA : GGCTGCTTTTGAAAGAGAAGTTGAAGGGATGCCTTCTATACGTTCCGTTGGTGATCTTCCACAAGAGCTTCATTGTCCCTTGTGTAAAGAAGTAATGAAAGATGCAGTGTTGACAAGCAAGTGTTGTTTTAGCAGTTACTGCGATAAAT : GCATAAGGGATCATATCATCTCGAAGTCGGTGTGTGTCTGTGGGGCCACAAATATACTTGCTGATGACCTGTTACCCAACAAGACTGTGAGGGATACAATTAATAGAATATTGGAATCAAATAATAGCAGTGCAGAGCATGGGGGTAGTGCTCTCCAAGTTCAAG : ATATGGAGTCAGCGCGCATTCTCCCACCAAAGATTCCATCTCCTTCACAATCTGCAGCTTCAAGGGGTGAGCCGTTGCCACCACCACCACCTCCTCCACCTGTTAAGGAGGAAAATTCTAAAGCCCAGGAGATTGCAGAAGAGGGTAAGAATGGCAGTGCTTCTCAGCAAATGTTGGAAAGAGGAAGAACTTTGAAGGTTGCAGATGTTTCTGAAGCTACACACGAGTCCGTCAGTGTTAAAGAACCTGTATCCCCGGGGAGTGCTCCATTGGCTGATGAAGAGGTTCAGCAAAAGCCAGTAGTTGGGGAGGCAG : GAAAAAAAAAGAAGAAGAAAAAAACACGATTGCCTTTGAACC : CTGCTGCTGCTGAGATGCAGTGGAGAGCTGCACAAGATCTTGCTGCTG</gDNA_template>
            <first_frame> G  N  P  R  W  F  I  C  F  T  K  W  C  Q  C  C  F  K  A  Q  *  :  G  C  F  *  K  R  S  *  R  D  A  F  Y  T  F  R  W  *  S  S  T  R  A  S  L  S  L  V  *  R  S  N  E  R  C  S  V  D  K  Q  V  L  F  *  Q  L  L  R  *  M :   H  K  G  S  Y  H  L  E  V  G  V  C  L  W  G  H  K  Y  T  C  *  *  P  V  T  Q  Q  D  C  E  G  Y  N  *  *  N  I  G  I  K  *  *  Q  C  R  A  W  G  *  C  S  P  S  S  R :   Y  G  V  S  A  H  S  P  T  K  D  S  I  S  F  T  I  C  S  F  K  G  *  A  V  A  T  T  T  T  S  S  T  C  *  G  G  K  F  *  S  P  G  D  C  R  R  G  *  E  W  Q  C  F  S  A  N  V  G  K  R  K  N  F  E  G  C  R  C  F  *  S  Y  T  R  V  R  Q  C  *  R  T  C  I  P  G  E  C  S  I  G  *  *  R  G  S  A  K  A  S  S  W  G  G  R :   K  K  K  E  E  E  K  N  T  I  A  F  E  P :   C  C  C  *  D  A  V  E  S  C  T  R  S  C  C   </first_frame>
            <second_frame>  A  T  P  D  G  S  Y  A  L  P  S  G  A  S  A  V  L  K  P  N  E :   A  A  F  E  R  E  V  E  G  M  P  S  I  R  S  V  G  D  L  P  Q  E  L  H  C  P  L  C  K  E  V  M  K  D  A  V  L  T  S  K  C  C  F  S  S  Y  C  D  K   : C  I  R  D  H  I  I  S  K  S  V  C  V  C  G  A  T  N  I  L  A  D  D  L  L  P  N  K  T  V  R  D  T  I  N  R  I  L  E  S  N  N  S  S  A  E  H  G  G  S  A  L  Q  V  Q   : D  M  E  S  A  R  I  L  P  P  K  I  P  S  P  S  Q  S  A  A  S  R  G  E  P  L  P  P  P  P  P  P  P  P  V  K  E  E  N  S  K  A  Q  E  I  A  E  E  G  K  N  G  S  A  S  Q  Q  M  L  E  R  G  R  T  L  K  V  A  D  V  S  E  A  T  H  E  S  V  S  V  K  E  P  V  S  P  G  S  A  P  L  A  D  E  E  V  Q  Q  K  P  V  V  G  E  A   : G  K  K  K  K  K  K  K  T  R  L  P  L  N   : P  A  A  A  E  M  Q  W  R  A  A  Q  D  L  A  A  </second_frame>
            <third_frame>   Q  P  Q  M  V  H  M  L  Y  Q  V  V  P  V  L  F  *  S  P  M   : R  L  L  L  K  E  K  L  K  G  C  L  L  Y  V  P  L  V  I  F  H  K  S  F  I  V  P  C  V  K  K  *  *  K  M  Q  C  *  Q  A  S  V  V  L  A  V  T  A  I  N  :  A  *  G  I  I  S  S  R  S  R  C  V  S  V  G  P  Q  I  Y  L  L  M  T  C  Y  P  T  R  L  *  G  I  Q  L  I  E  Y  W  N  Q  I  I  A  V  Q  S  M  G  V  V  L  S  K  F  K  :  I  W  S  Q  R  A  F  S  H  Q  R  F  H  L  L  H  N  L  Q  L  Q  G  V  S  R  C  H  H  H  H  L  L  H  L  L  R  R  K  I  L  K  P  R  R  L  Q  K  R  V  R  M  A  V  L  L  S  K  C  W  K  E  E  E  L  *  R  L  Q  M  F  L  K  L  H  T  S  P  S  V  L  K  N  L  Y  P  R  G  V  L  H  W  L  M  K  R  F  S  K  S  Q  *  L  G  R  Q  :  E  K  K  R  R  R  K  K  H  D  C  L  *  T  :  L  L  L  L  R  C  S  G  E  L  H  K  I  L  L  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0101H16.1" strand="-"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="30997" stop="30936"/>
                    <exon start="30859" stop="30711"/>
                    <exon start="30525" stop="30361"/>
                    <exon start="30255" stop="29941"/>
                    <exon start="29794" stop="29753"/>
                    <exon start="29611" stop="29565"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>780</number_coding_nucleotides>
                  <number_encoded_amino_acids>260</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ATPDGSYALPSGASAVLKPNEAAFEREVEGMPSIRSVGDLPQELHCPLCKEVMKDAVLTSKCCFSSYCDKCIRDHIISKSVCVCGATNILADDLLPNKTVRDTINRILESNNSSAEHGGSALQVQDMESARILPPKIPSPSQSAASRGEPLPPPPPPPPVKEENSKAQEIAEEGKNGSASQQMLERGRTLKVADVSEATHESVSVKEPVSPGSAPLADEEVQQKPVVGEAGKKKKKKKTRLPLNPAAAEMQWRAAQDLAA</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="-" PGL_start="34604" PGL_stop="31779"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="34604" e_stop="33894"/>
            <exon e_start="33807" e_stop="33799"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.263" e_score="1.000"/>
          <exon-only e_score="0.778"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="34604" e_stop="33894" e_length="711"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.263">
            <gDNA_intron_boundary i_start="33893" i_stop="33808" i_length="86"/>
          </intron>
          <exon e_serial="2" e_score="0.778">
            <gDNA_exon_boundary e_start="33807" e_stop="33799" e_length="9"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34604" stop="33902"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E723200" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34576" stop="33894"/>
              <exon start="33807" stop="33799"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E545174" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34576" stop="33902"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E545173" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34575" stop="33960"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E308313" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34568" stop="33894"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E354963" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34568" stop="33896"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E352077" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34352" stop="34065"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E740166" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34222" stop="33902"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E308314" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CCCGACAATCAATCAGTTTCTCATCCGTGGAAACCCTAGTTCCGGCACCCCCCATAAAGCTTTACTCTTTTGGCTTTCTTTTCAGTTTTCCGTTCGATCCGCTTCGGAATTCAACGGACTTTTCGGCGAGTTCACCGTGCGCGAAGAGGAATTGACGATTTCCGGTAGAGAAACCTCTCCTGTTATCTGAAGAATTGTCGGTCGACGGGCGGTCGGTTGGTCGTCGCTGATTGGATTCGATTCAATTCAATCGATCTGAAGAATCCGGTGTTCTATAAACCCATAGAAAGCTTCTGAGTTTATCGGATAGAATCATCAACCTCTTCAAGGGTATCCGCTAAGAGAGACGCCCGGCGTGATTAGATAGATCGGATCGAGATCGTCCCCAGTCGAAGGAGTAGCGGTAGCAGTGGTTTGATTTTGGTTATAATAAGCTTGCCTTTAGATATTGCTGCTGACGGAAGCTTGCGGATTATTTTGCTCGTGGAGGATGTTCCTACTGATCTATTGGAGGAATTTGGTTTGACTGATTTTCTTGAGTTATTGAAGAGAAGTTGTGAGCTAGAAAAAAGAGCTTTTAATATTTTTGTACTTTATATCAATTTTCTTTGAGTTCAATATCAGGCCTATTATGATTTTTTGATCGGCCTCGTTGTTGTTATATTGTTTTTGTTTGAGGAAAAAAAGGAATTTTAAGAAAAAAGGAGCTAT : AAAAAATAT</gDNA_template>
            <first_frame> P  D  N  Q  S  V  S  H  P  W  K  P  *  F  R  H  P  P  *  S  F  T  L  L  A  F  F  S  V  F  R  S  I  R  F  G  I  Q  R  T  F  R  R  V  H  R  A  R  R  G  I  D  D  F  R  *  R  N  L  S  C  Y  L  K  N  C  R  S  T  G  G  R  L  V  V  A  D  W  I  R  F  N  S  I  D  L  K  N  P  V  F  Y  K  P  I  E  S  F  *  V  Y  R  I  E  S  S  T  S  S  R  V  S  A  K  R  D  A  R  R  D  *  I  D  R  I  E  I  V  P  S  R  R  S  S  G  S  S  G  L  I  L  V  I  I  S  L  P  L  D  I  A  A  D  G  S  L  R  I  I  L  L  V  E  D  V  P  T  D  L  L  E  E  F  G  L  T  D  F  L  E  L  L  K  R  S  C  E  L  E  K  R  A  F  N  I  F  V  L  Y  I  N  F  L  *  V  Q  Y  Q  A  Y  Y  D  F  L  I  G  L  V  V  V  I  L  F  L  F  E  E  K  K  E  F  *  E  K  R  S  Y  :  K  K  Y </first_frame>
            <second_frame>  P  T  I  N  Q  F  L  I  R  G  N  P  S  S  G  T  P  H  K  A  L  L  F  W  L  S  F  Q  F  S  V  R  S  A  S  E  F  N  G  L  F  G  E  F  T  V  R  E  E  E  L  T  I  S  G  R  E  T  S  P  V  I  *  R  I  V  G  R  R  A  V  G  W  S  S  L  I  G  F  D  S  I  Q  S  I  *  R  I  R  C  S  I  N  P  *  K  A  S  E  F  I  G  *  N  H  Q  P  L  Q  G  Y  P  L  R  E  T  P  G  V  I  R  *  I  G  S  R  S  S  P  V  E  G  V  A  V  A  V  V  *  F  W  L  *  *  A  C  L  *  I  L  L  L  T  E  A  C  G  L  F  C  S  W  R  M  F  L  L  I  Y  W  R  N  L  V  *  L  I  F  L  S  Y  *  R  E  V  V  S  *  K  K  E  L  L  I  F  L  Y  F  I  S  I  F  F  E  F  N  I  R  P  I  M  I  F  *  S  A  S  L  L  L  Y  C  F  C  L  R  K  K  R  N  F  K  K  K  G  A  I :   K  N   </second_frame>
            <third_frame>   R  Q  S  I  S  F  S  S  V  E  T  L  V  P  A  P  P  I  K  L  Y  S  F  G  F  L  F  S  F  P  F  D  P  L  R  N  S  T  D  F  S  A  S  S  P  C  A  K  R  N  *  R  F  P  V  E  K  P  L  L  L  S  E  E  L  S  V  D  G  R  S  V  G  R  R  *  L  D  S  I  Q  F  N  R  S  E  E  S  G  V  L  *  T  H  R  K  L  L  S  L  S  D  R  I  I  N  L  F  K  G  I  R  *  E  R  R  P  A  *  L  D  R  S  D  R  D  R  P  Q  S  K  E  *  R  *  Q  W  F  D  F  G  Y  N  K  L  A  F  R  Y  C  C  *  R  K  L  A  D  Y  F  A  R  G  G  C  S  Y  *  S  I  G  G  I  W  F  D  *  F  S  *  V  I  E  E  K  L  *  A  R  K  K  S  F  *  Y  F  C  T  L  Y  Q  F  S  L  S  S  I  S  G  L  L  *  F  F  D  R  P  R  C  C  Y  I  V  F  V  *  G  K  K  G  I  L  R  K  K  E  L   : *  K  I  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0101H16.1" strand="-"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="34241" stop="33993"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>246</number_coding_nucleotides>
                  <number_encoded_amino_acids>82</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IDRIEIVPSRRSSGSSGLILVIISLPLDIAADGSLRIILLVEDVPTDLLEEFGLTDFLELLKRSCELEKRAFNIFVLYINFL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="34604" e_stop="33730"/>
            <exon e_start="32899" e_stop="32788"/>
            <exon e_start="32292" e_stop="32211"/>
            <exon e_start="32109" e_stop="31943"/>
            <exon e_start="31805" e_stop="31779"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.913" e_score="1.000"/>
          <exon-intron don_prob="0.990" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.985" e_score="1.000"/>
          <exon-intron don_prob="0.974" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="34604" e_stop="33730" e_length="875"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.913">
            <gDNA_intron_boundary i_start="33729" i_stop="32900" i_length="830"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="32899" e_stop="32788" e_length="112"/>
          </exon>
          <intron i_serial="2" don_prob="0.990" acc_prob="0.993">
            <gDNA_intron_boundary i_start="32787" i_stop="32293" i_length="495"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="32292" e_stop="32211" e_length="82"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.985">
            <gDNA_intron_boundary i_start="32210" i_stop="32110" i_length="101"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="32109" e_stop="31943" e_length="167"/>
          </exon>
          <intron i_serial="4" don_prob="0.974" acc_prob="0.999">
            <gDNA_intron_boundary i_start="31942" i_stop="31806" i_length="137"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="31805" e_stop="31779" e_length="27"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34604" stop="33902"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E723200" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34576" stop="33902"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E545173" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34575" stop="33960"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E308313" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34568" stop="33894"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E354963" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34568" stop="33896"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E352077" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34352" stop="34065"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E740166" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34222" stop="33902"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E308314" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34057" stop="33730"/>
              <exon start="32899" stop="32788"/>
              <exon start="32292" stop="32211"/>
              <exon start="32109" stop="31943"/>
              <exon start="31805" stop="31779"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E327704" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CCCGACAATCAATCAGTTTCTCATCCGTGGAAACCCTAGTTCCGGCACCCCCCATAAAGCTTTACTCTTTTGGCTTTCTTTTCAGTTTTCCGTTCGATCCGCTTCGGAATTCAACGGACTTTTCGGCGAGTTCACCGTGCGCGAAGAGGAATTGACGATTTCCGGTAGAGAAACCTCTCCTGTTATCTGAAGAATTGTCGGTCGACGGGCGGTCGGTTGGTCGTCGCTGATTGGATTCGATTCAATTCAATCGATCTGAAGAATCCGGTGTTCTATAAACCCATAGAAAGCTTCTGAGTTTATCGGATAGAATCATCAACCTCTTCAAGGGTATCCGCTAAGAGAGACGCCCGGCGTGATTAGATAGATCGGATCGAGATCGTCCCCAGTCGAAGGAGTAGCGGTAGCAGTGGTTTGATTTTGGTTATAATAAGCTTGCCTTTAGATATTGCTGCTGACGGAAGCTTGCGGATTATTTTGCTCGTGGAGGATGTTCCTACTGATCTATTGGAGGAATTTGGTTTGACTGATTTTCTTGAGTTATTGAAGAGAAGTTGTGAGCTAGAAAAAAGAGCTTTTAATATTTTTGTACTTTATATCAATTTTCTTTGAGTTCAATATCAGGCCTATTATGATTTTTTGATCGGCCTCGTTGTTGTTATATTGTTTTTGTTTGAGGAAAAAAAGGAATTTTAAGAAAAAAGGAGCTATGTCAGTTTATTTTAAGTTTAAAAGTGCGAAAGATTATGATTCAATTCCAATTGATGGTCACTTTATTACTGTTGGTAATTTGAAAGAAAAAATATTTGAATCCAAGCATCTGGGCAGGGGTACAGATTTCGACCTCGTTGTCACCAACGCCCAGTCTAACGAAG : AATATCTTGATGAGGACACCTTGATTCCCAAAAATACTAGTGTTTTGATTCGTCGCGTTCCTGGACGACCTCGCATGCCCATAGTAACTGCACCTGTAACAGAACCAGACGA : GCCCCAGGTAGAATACCGATCTGAGGAGGCTCAAGCAGTTAGAAGTAATTTTGTGGGAGGGGAGTCATCTGCCACCAAATAT : CCTGAAGATCTTGAATGGGATGAATTTGGAAATGATCTTTACTCTATTCCTGAAACAATATCAGTACAGTCAAGCAACCAAGTGCAGGATGCTCCTCCTCCAAGTAAAGCTGATGAGGAGAGTAAGATCAAAGCTTTAATTGACACTCCAGCCTTAGATTGGCAGAG : TCAACCCTCTGATGGCTTTGGTGCTGG</gDNA_template>
            <first_frame> P  D  N  Q  S  V  S  H  P  W  K  P  *  F  R  H  P  P  *  S  F  T  L  L  A  F  F  S  V  F  R  S  I  R  F  G  I  Q  R  T  F  R  R  V  H  R  A  R  R  G  I  D  D  F  R  *  R  N  L  S  C  Y  L  K  N  C  R  S  T  G  G  R  L  V  V  A  D  W  I  R  F  N  S  I  D  L  K  N  P  V  F  Y  K  P  I  E  S  F  *  V  Y  R  I  E  S  S  T  S  S  R  V  S  A  K  R  D  A  R  R  D  *  I  D  R  I  E  I  V  P  S  R  R  S  S  G  S  S  G  L  I  L  V  I  I  S  L  P  L  D  I  A  A  D  G  S  L  R  I  I  L  L  V  E  D  V  P  T  D  L  L  E  E  F  G  L  T  D  F  L  E  L  L  K  R  S  C  E  L  E  K  R  A  F  N  I  F  V  L  Y  I  N  F  L  *  V  Q  Y  Q  A  Y  Y  D  F  L  I  G  L  V  V  V  I  L  F  L  F  E  E  K  K  E  F  *  E  K  R  S  Y  V  S  L  F  *  V  *  K  C  E  R  L  *  F  N  S  N  *  W  S  L  Y  Y  C  W  *  F  E  R  K  N  I  *  I  Q  A  S  G  Q  G  Y  R  F  R  P  R  C  H  Q  R  P  V  *  R  R :   I  S  *  *  G  H  L  D  S  Q  K  Y  *  C  F  D  S  S  R  S  W  T  T  S  H  A  H  S  N  C  T  C  N  R  T  R  R  :  A  P  G  R  I  P  I  *  G  G  S  S  S  *  K  *  F  C  G  R  G  V  I  C  H  Q  I   : S  *  R  S  *  M  G  *  I  W  K  *  S  L  L  Y  S  *  N  N  I  S  T  V  K  Q  P  S  A  G  C  S  S  S  K  *  S  *  *  G  E  *  D  Q  S  F  N  *  H  S  S  L  R  L  A  E  :  S  T  L  *  W  L  W  C  W </first_frame>
            <second_frame>  P  T  I  N  Q  F  L  I  R  G  N  P  S  S  G  T  P  H  K  A  L  L  F  W  L  S  F  Q  F  S  V  R  S  A  S  E  F  N  G  L  F  G  E  F  T  V  R  E  E  E  L  T  I  S  G  R  E  T  S  P  V  I  *  R  I  V  G  R  R  A  V  G  W  S  S  L  I  G  F  D  S  I  Q  S  I  *  R  I  R  C  S  I  N  P  *  K  A  S  E  F  I  G  *  N  H  Q  P  L  Q  G  Y  P  L  R  E  T  P  G  V  I  R  *  I  G  S  R  S  S  P  V  E  G  V  A  V  A  V  V  *  F  W  L  *  *  A  C  L  *  I  L  L  L  T  E  A  C  G  L  F  C  S  W  R  M  F  L  L  I  Y  W  R  N  L  V  *  L  I  F  L  S  Y  *  R  E  V  V  S  *  K  K  E  L  L  I  F  L  Y  F  I  S  I  F  F  E  F  N  I  R  P  I  M  I  F  *  S  A  S  L  L  L  Y  C  F  C  L  R  K  K  R  N  F  K  K  K  G  A  M  S  V  Y  F  K  F  K  S  A  K  D  Y  D  S  I  P  I  D  G  H  F  I  T  V  G  N  L  K  E  K  I  F  E  S  K  H  L  G  R  G  T  D  F  D  L  V  V  T  N  A  Q  S  N  E   : E  Y  L  D  E  D  T  L  I  P  K  N  T  S  V  L  I  R  R  V  P  G  R  P  R  M  P  I  V  T  A  P  V  T  E  P  D  E :   P  Q  V  E  Y  R  S  E  E  A  Q  A  V  R  S  N  F  V  G  G  E  S  S  A  T  K  Y  :  P  E  D  L  E  W  D  E  F  G  N  D  L  Y  S  I  P  E  T  I  S  V  Q  S  S  N  Q  V  Q  D  A  P  P  P  S  K  A  D  E  E  S  K  I  K  A  L  I  D  T  P  A  L  D  W  Q  S :   Q  P  S  D  G  F  G  A   </second_frame>
            <third_frame>   R  Q  S  I  S  F  S  S  V  E  T  L  V  P  A  P  P  I  K  L  Y  S  F  G  F  L  F  S  F  P  F  D  P  L  R  N  S  T  D  F  S  A  S  S  P  C  A  K  R  N  *  R  F  P  V  E  K  P  L  L  L  S  E  E  L  S  V  D  G  R  S  V  G  R  R  *  L  D  S  I  Q  F  N  R  S  E  E  S  G  V  L  *  T  H  R  K  L  L  S  L  S  D  R  I  I  N  L  F  K  G  I  R  *  E  R  R  P  A  *  L  D  R  S  D  R  D  R  P  Q  S  K  E  *  R  *  Q  W  F  D  F  G  Y  N  K  L  A  F  R  Y  C  C  *  R  K  L  A  D  Y  F  A  R  G  G  C  S  Y  *  S  I  G  G  I  W  F  D  *  F  S  *  V  I  E  E  K  L  *  A  R  K  K  S  F  *  Y  F  C  T  L  Y  Q  F  S  L  S  S  I  S  G  L  L  *  F  F  D  R  P  R  C  C  Y  I  V  F  V  *  G  K  K  G  I  L  R  K  K  E  L  C  Q  F  I  L  S  L  K  V  R  K  I  M  I  Q  F  Q  L  M  V  T  L  L  L  L  V  I  *  K  K  K  Y  L  N  P  S  I  W  A  G  V  Q  I  S  T  S  L  S  P  T  P  S  L  T  K  :  N  I  L  M  R  T  P  *  F  P  K  I  L  V  F  *  F  V  A  F  L  D  D  L  A  C  P  *  *  L  H  L  *  Q  N  Q  T   : S  P  R  *  N  T  D  L  R  R  L  K  Q  L  E  V  I  L  W  E  G  S  H  L  P  P  N  I :   L  K  I  L  N  G  M  N  L  E  M  I  F  T  L  F  L  K  Q  Y  Q  Y  S  Q  A  T  K  C  R  M  L  L  L  Q  V  K  L  M  R  R  V  R  S  K  L  *  L  T  L  Q  P  *  I  G  R   : V  N  P  L  M  A  L  V  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0101H16.1" strand="-"/>
                <serials PGL_serial="11" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="33961" stop="33730"/>
                    <exon start="32899" stop="32788"/>
                    <exon start="32292" stop="32211"/>
                    <exon start="32109" stop="31943"/>
                    <exon start="31805" stop="31781"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>618</number_coding_nucleotides>
                  <number_encoded_amino_acids>206</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SASLLLYCFCLRKKRNFKKKGAMSVYFKFKSAKDYDSIPIDGHFITVGNLKEKIFESKHLGRGTDFDLVVTNAQSNEEYLDEDTLIPKNTSVLIRRVPGRPRMPIVTAPVTEPDEPQVEYRSEEAQAVRSNFVGGESSATKYPEDLEWDEFGNDLYSIPETISVQSSNQVQDAPPPSKADEESKIKALIDTPALDWQSQPSDGFGA</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0101H16.1" strand="-"/>
                <serials PGL_serial="11" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="34241" stop="33993"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>246</number_coding_nucleotides>
                  <number_encoded_amino_acids>82</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IDRIEIVPSRRSSGSSGLILVIISLPLDIAADGSLRIILLVEDVPTDLLEEFGLTDFLELLKRSCELEKRAFNIFVLYINFL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="+" PGL_start="37050" PGL_stop="48815"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="37050" e_stop="37279"/>
            <exon e_start="37374" e_stop="37476"/>
            <exon e_start="37560" e_stop="37664"/>
            <exon e_start="41370" e_stop="41455"/>
            <exon e_start="44407" e_stop="44648"/>
            <exon e_start="45979" e_stop="46159"/>
            <exon e_start="47595" e_stop="47778"/>
            <exon e_start="48255" e_stop="48815"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.997" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.860" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.914" acc_prob="0.968" e_score="1.000"/>
          <exon-intron don_prob="0.959" acc_prob="0.983" e_score="1.000"/>
          <exon-intron don_prob="0.583" acc_prob="0.680" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.932" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="37050" e_stop="37279" e_length="230"/>
          </exon>
          <intron i_serial="1" don_prob="0.997" acc_prob="0.998">
            <gDNA_intron_boundary i_start="37280" i_stop="37373" i_length="94"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="37374" e_stop="37476" e_length="103"/>
          </exon>
          <intron i_serial="2" don_prob="0.998" acc_prob="0.998">
            <gDNA_intron_boundary i_start="37477" i_stop="37559" i_length="83"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="37560" e_stop="37664" e_length="105"/>
          </exon>
          <intron i_serial="3" don_prob="0.860" acc_prob="0.999">
            <gDNA_intron_boundary i_start="37665" i_stop="41369" i_length="3705"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="41370" e_stop="41455" e_length="86"/>
          </exon>
          <intron i_serial="4" don_prob="0.914" acc_prob="0.968">
            <gDNA_intron_boundary i_start="41456" i_stop="44406" i_length="2951"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="44407" e_stop="44648" e_length="242"/>
          </exon>
          <intron i_serial="5" don_prob="0.959" acc_prob="0.983">
            <gDNA_intron_boundary i_start="44649" i_stop="45978" i_length="1330"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="45979" e_stop="46159" e_length="181"/>
          </exon>
          <intron i_serial="6" don_prob="0.583" acc_prob="0.680">
            <gDNA_intron_boundary i_start="46160" i_stop="47594" i_length="1435"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="47595" e_stop="47778" e_length="184"/>
          </exon>
          <intron i_serial="7" don_prob="0.999" acc_prob="0.932">
            <gDNA_intron_boundary i_start="47779" i_stop="48254" i_length="476"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="48255" e_stop="48815" e_length="561"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37050" stop="37279"/>
              <exon start="37374" stop="37476"/>
              <exon start="37560" stop="37664"/>
              <exon start="41370" stop="41455"/>
              <exon start="44407" stop="44573"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E316928" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37050" stop="37250"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E317133" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37119" stop="37279"/>
              <exon start="37374" stop="37476"/>
              <exon start="37560" stop="37664"/>
              <exon start="41370" stop="41455"/>
              <exon start="44407" stop="44648"/>
              <exon start="45979" stop="46068"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E720955" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37146" stop="37279"/>
              <exon start="37374" stop="37476"/>
              <exon start="37560" stop="37664"/>
              <exon start="41370" stop="41455"/>
              <exon start="44407" stop="44459"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E300021" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37152" stop="37279"/>
              <exon start="37374" stop="37476"/>
              <exon start="37560" stop="37664"/>
              <exon start="41370" stop="41455"/>
              <exon start="44407" stop="44648"/>
              <exon start="45979" stop="46023"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E318368" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37170" stop="37279"/>
              <exon start="37374" stop="37476"/>
              <exon start="37560" stop="37664"/>
              <exon start="41370" stop="41455"/>
              <exon start="44407" stop="44648"/>
              <exon start="45979" stop="46159"/>
              <exon start="47595" stop="47778"/>
              <exon start="48255" stop="48811"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E745552" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37569" stop="37664"/>
              <exon start="41370" stop="41455"/>
              <exon start="44407" stop="44648"/>
              <exon start="45979" stop="46060"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E207071" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="48408" stop="48815"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E230425" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="48463" stop="48813"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E337335" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTTCCAGCAAACACACTTGTCATCCTTGAGCCGATCTTGACTTTGGCCGCTATAACTTCTGGTAGCGTCTGCCTCAGCAAACTGTGACACTATATCACGTTTACAGCTCGAAGAGAGAAGCAGAGTACTGTGAAGAAGCGAAAAGGGGGGAGAATTGGGATTTCGGAAGAGCAGAAAATGGGAAACTCTCAGTCGAATTCAACGAATCCACGTTTTGATTTAGCCAAGAG : AGCTTTCACAGAGAGGAAATTGGAAGACTTGAAATCGTTGTTCGATTCACTAGCTGCACAATCACAGAGCAATGGAAAATACGTTTCTTCTTCTGTTTTCAAG : GCATATATTGGAGTTGAAGGGCCATTGGGTGATAGAATGTTCGATTTGGTCACCCAGAAGCGTAAGGATCAAAAGCTTACATATGAGGACCTTGTGATTGCTAAA : GGAACCTATGAAAAAGGGACAAATGCTGATATTGAAGAGTTTATCTATCAGTTGTTAGATGTCTTTGATGATGGCGTTGTTGGAAG : ATCAGATCTGGAAGCAGTCTTGACTGCAGTACTAAGAAATATATCTTCTCATGAGAGCCATCAATCTGAACCTAGTCCGGACAGGGAAATTCTCGACATTTTCCTCAATGCTGCAAATTTGACAACGGATGATACAAAATGCGCTGAAAGTTGTATGTCTTTTGAGGAATTTAAAAGTTGGTGTGCCCGTCTTCCATCAGTAAGGAAGTTTCTCGGAACTCTGTTGTCTACACGTGATTCAG : GCTCTGAGGTTCCTATGCTAGTATACCCAGAGAACATTGATCCTGCTGTAATATTGTTAAGAAAGGAATATGCTTGGCATATAGGTGGGGCCCTCCCACAAGACGAGCTGCATGAATGGAGACTTTTGTATCACAGTACAGTACATGGCCTAAGTTTCAGTACTTTCCTGGGGAACATTTC : AAATGACAAAGGACCAACTTTATTGGTAATTAAAGACAAAGAAGGCTATATTTACGGAGGTTATGCATCTCAGCCATGGGAGAAGCATGCTGACTTTTATGGGGATATGAAGTCTTTCCTCTTCCAGCTATACCCAAAGGCATCGGTTTACCGTCCTACTGGAGCGAACTCTAATTTACAGTGG : TGTGCTATACATTTTAGTTCTGAGAGCATCCCCAATGGCATTGGTTTTGGAGGACGAGCACACCACTTCGGCTTGTTCATCTCAGCTAACTTTGACCTGGGGCATACTTTCACCTGCACGACCTTTGGCAGTCCTAGCTTGTCAAAGACCCACCAAATCTATCCAGAAGTGATAGAATGCTGGGGAGTTGCGATAAAAAGAGCTCAAGATAATCAGGATAGACTTCAAGGTACCGTGTTAGAAAGATTTAAAGAGGATCGCCATATGCTTAACATGGTTGGACTTGCAAATTCAAGTGAGTGATGTGCCCTCTGTACTTTCTTCTTGTGCTGAATTAGCACAGTTTCTAGAGTTTATTGTCTTGCGTGTAGTTTAATAATGTGTTGTGTTACTACAATATAAGTGAGTGCAAAATCACTAGATGCTCAACCCCGTGTATGCGTCGATAGCATCTAGAGTGTAATTTAAGGTTTTGCAATCATTACTATCCCTGGAGTCTTGGCAAATTTCTTCATGCCATTCTCCTAATCATTGTTAATAGTAATTGTCATTTTGATGTAT</gDNA_template>
            <first_frame> F  P  A  N  T  L  V  I  L  E  P  I  L  T  L  A  A  I  T  S  G  S  V  C  L  S  K  L  *  H  Y  I  T  F  T  A  R  R  E  K  Q  S  T  V  K  K  R  K  G  G  R  I  G  I  S  E  E  Q  K  M  G  N  S  Q  S  N  S  T  N  P  R  F  D  L  A  K  R :   A  F  T  E  R  K  L  E  D  L  K  S  L  F  D  S  L  A  A  Q  S  Q  S  N  G  K  Y  V  S  S  S  V  F  K  :  A  Y  I  G  V  E  G  P  L  G  D  R  M  F  D  L  V  T  Q  K  R  K  D  Q  K  L  T  Y  E  D  L  V  I  A  K  :  G  T  Y  E  K  G  T  N  A  D  I  E  E  F  I  Y  Q  L  L  D  V  F  D  D  G  V  V  G  R :   S  D  L  E  A  V  L  T  A  V  L  R  N  I  S  S  H  E  S  H  Q  S  E  P  S  P  D  R  E  I  L  D  I  F  L  N  A  A  N  L  T  T  D  D  T  K  C  A  E  S  C  M  S  F  E  E  F  K  S  W  C  A  R  L  P  S  V  R  K  F  L  G  T  L  L  S  T  R  D  S   : G  S  E  V  P  M  L  V  Y  P  E  N  I  D  P  A  V  I  L  L  R  K  E  Y  A  W  H  I  G  G  A  L  P  Q  D  E  L  H  E  W  R  L  L  Y  H  S  T  V  H  G  L  S  F  S  T  F  L  G  N  I  S :   N  D  K  G  P  T  L  L  V  I  K  D  K  E  G  Y  I  Y  G  G  Y  A  S  Q  P  W  E  K  H  A  D  F  Y  G  D  M  K  S  F  L  F  Q  L  Y  P  K  A  S  V  Y  R  P  T  G  A  N  S  N  L  Q  W  :  C  A  I  H  F  S  S  E  S  I  P  N  G  I  G  F  G  G  R  A  H  H  F  G  L  F  I  S  A  N  F  D  L  G  H  T  F  T  C  T  T  F  G  S  P  S  L  S  K  T  H  Q  I  Y  P  E  V  I  E  C  W  G  V  A  I  K  R  A  Q  D  N  Q  D  R  L  Q  G  T  V  L  E  R  F  K  E  D  R  H  M  L  N  M  V  G  L  A  N  S  S  E  *  C  A  L  C  T  F  F  L  C  *  I  S  T  V  S  R  V  Y  C  L  A  C  S  L  I  M  C  C  V  T  T  I  *  V  S  A  K  S  L  D  A  Q  P  R  V  C  V  D  S  I  *  S  V  I  *  G  F  A  I  I  T  I  P  G  V  L  A  N  F  F  M  P  F  S  *  S  L  L  I  V  I  V  I  L  M  Y </first_frame>
            <second_frame>  F  Q  Q  T  H  L  S  S  L  S  R  S  *  L  W  P  L  *  L  L  V  A  S  A  S  A  N  C  D  T  I  S  R  L  Q  L  E  E  R  S  R  V  L  *  R  S  E  K  G  G  E  L  G  F  R  K  S  R  K  W  E  T  L  S  R  I  Q  R  I  H  V  L  I  *  P  R   : E  L  S  Q  R  G  N  W  K  T  *  N  R  C  S  I  H  *  L  H  N  H  R  A  M  E  N  T  F  L  L  L  F  S  R :   H  I  L  E  L  K  G  H  W  V  I  E  C  S  I  W  S  P  R  S  V  R  I  K  S  L  H  M  R  T  L  *  L  L  K :   E  P  M  K  K  G  Q  M  L  I  L  K  S  L  S  I  S  C  *  M  S  L  M  M  A  L  L  E   : D  Q  I  W  K  Q  S  *  L  Q  Y  *  E  I  Y  L  L  M  R  A  I  N  L  N  L  V  R  T  G  K  F  S  T  F  S  S  M  L  Q  I  *  Q  R  M  I  Q  N  A  L  K  V  V  C  L  L  R  N  L  K  V  G  V  P  V  F  H  Q  *  G  S  F  S  E  L  C  C  L  H  V  I  Q  :  A  L  R  F  L  C  *  Y  T  Q  R  T  L  I  L  L  *  Y  C  *  E  R  N  M  L  G  I  *  V  G  P  S  H  K  T  S  C  M  N  G  D  F  C  I  T  V  Q  Y  M  A  *  V  S  V  L  S  W  G  T  F   : Q  M  T  K  D  Q  L  Y  W  *  L  K  T  K  K  A  I  F  T  E  V  M  H  L  S  H  G  R  S  M  L  T  F  M  G  I  *  S  L  S  S  S  S  Y  T  Q  R  H  R  F  T  V  L  L  E  R  T  L  I  Y  S  G :   V  L  Y  I  L  V  L  R  A  S  P  M  A  L  V  L  E  D  E  H  T  T  S  A  C  S  S  Q  L  T  L  T  W  G  I  L  S  P  A  R  P  L  A  V  L  A  C  Q  R  P  T  K  S  I  Q  K  *  *  N  A  G  E  L  R  *  K  E  L  K  I  I  R  I  D  F  K  V  P  C  *  K  D  L  K  R  I  A  I  C  L  T  W  L  D  L  Q  I  Q  V  S  D  V  P  S  V  L  S  S  C  A  E  L  A  Q  F  L  E  F  I  V  L  R  V  V  *  *  C  V  V  L  L  Q  Y  K  *  V  Q  N  H  *  M  L  N  P  V  Y  A  S  I  A  S  R  V  *  F  K  V  L  Q  S  L  L  S  L  E  S  W  Q  I  S  S  C  H  S  P  N  H  C  *  *  *  L  S  F  *  C   </second_frame>
            <third_frame>   S  S  K  H  T  C  H  P  *  A  D  L  D  F  G  R  Y  N  F  W  *  R  L  P  Q  Q  T  V  T  L  Y  H  V  Y  S  S  K  R  E  A  E  Y  C  E  E  A  K  R  G  E  N  W  D  F  G  R  A  E  N  G  K  L  S  V  E  F  N  E  S  T  F  *  F  S  Q  E  :  S  F  H  R  E  E  I  G  R  L  E  I  V  V  R  F  T  S  C  T  I  T  E  Q  W  K  I  R  F  F  F  C  F  Q   : G  I  Y  W  S  *  R  A  I  G  *  *  N  V  R  F  G  H  P  E  A  *  G  S  K  A  Y  I  *  G  P  C  D  C  *   : R  N  L  *  K  R  D  K  C  *  Y  *  R  V  Y  L  S  V  V  R  C  L  *  *  W  R  C  W  K  :  I  R  S  G  S  S  L  D  C  S  T  K  K  Y  I  F  S  *  E  P  S  I  *  T  *  S  G  Q  G  N  S  R  H  F  P  Q  C  C  K  F  D  N  G  *  Y  K  M  R  *  K  L  Y  V  F  *  G  I  *  K  L  V  C  P  S  S  I  S  K  E  V  S  R  N  S  V  V  Y  T  *  F  R :   L  *  G  S  Y  A  S  I  P  R  E  H  *  S  C  C  N  I  V  K  K  G  I  C  L  A  Y  R  W  G  P  P  T  R  R  A  A  *  M  E  T  F  V  S  Q  Y  S  T  W  P  K  F  Q  Y  F  P  G  E  H  F  :  K  *  Q  R  T  N  F  I  G  N  *  R  Q  R  R  L  Y  L  R  R  L  C  I  S  A  M  G  E  A  C  *  L  L  W  G  Y  E  V  F  P  L  P  A  I  P  K  G  I  G  L  P  S  Y  W  S  E  L  *  F  T  V   : V  C  Y  T  F  *  F  *  E  H  P  Q  W  H  W  F  W  R  T  S  T  P  L  R  L  V  H  L  S  *  L  *  P  G  A  Y  F  H  L  H  D  L  W  Q  S  *  L  V  K  D  P  P  N  L  S  R  S  D  R  M  L  G  S  C  D  K  K  S  S  R  *  S  G  *  T  S  R  Y  R  V  R  K  I  *  R  G  S  P  Y  A  *  H  G  W  T  C  K  F  K  *  V  M  C  P  L  Y  F  L  L  V  L  N  *  H  S  F  *  S  L  L  S  C  V  *  F  N  N  V  L  C  Y  Y  N  I  S  E  C  K  I  T  R  C  S  T  P  C  M  R  R  *  H  L  E  C  N  L  R  F  C  N  H  Y  Y  P  W  S  L  G  K  F  L  H  A  I  L  L  I  I  V  N  S  N  C  H  F  D  V  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0101H16.1" strand="+"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="37137" stop="37279"/>
                    <exon start="37374" stop="37476"/>
                    <exon start="37560" stop="37664"/>
                    <exon start="41370" stop="41455"/>
                    <exon start="44407" stop="44648"/>
                    <exon start="45979" stop="46159"/>
                    <exon start="47595" stop="47778"/>
                    <exon start="48255" stop="48557"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1344</number_coding_nucleotides>
                  <number_encoded_amino_acids>448</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>HYITFTARREKQSTVKKRKGGRIGISEEQKMGNSQSNSTNPRFDLAKRAFTERKLEDLKSLFDSLAAQSQSNGKYVSSSVFKAYIGVEGPLGDRMFDLVTQKRKDQKLTYEDLVIAKGTYEKGTNADIEEFIYQLLDVFDDGVVGRSDLEAVLTAVLRNISSHESHQSEPSPDREILDIFLNAANLTTDDTKCAESCMSFEEFKSWCARLPSVRKFLGTLLSTRDSGSEVPMLVYPENIDPAVILLRKEYAWHIGGALPQDELHEWRLLYHSTVHGLSFSTFLGNISNDKGPTLLVIKDKEGYIYGGYASQPWEKHADFYGDMKSFLFQLYPKASVYRPTGANSNLQWCAIHFSSESIPNGIGFGGRAHHFGLFISANFDLGHTFTCTTFGSPSLSKTHQIYPEVIECWGVAIKRAQDNQDRLQGTVLERFKEDRHMLNMVGLANSSE*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="37050" e_stop="37279"/>
            <exon e_start="37385" e_stop="37476"/>
            <exon e_start="37560" e_stop="37664"/>
            <exon e_start="41370" e_stop="41455"/>
            <exon e_start="44407" e_stop="44648"/>
            <exon e_start="45979" e_stop="46060"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.997" acc_prob="0.067" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.860" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.914" acc_prob="0.968" e_score="1.000"/>
          <exon-intron don_prob="0.959" acc_prob="0.983" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="37050" e_stop="37279" e_length="230"/>
          </exon>
          <intron i_serial="1" don_prob="0.997" acc_prob="0.067">
            <gDNA_intron_boundary i_start="37280" i_stop="37384" i_length="105"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="37385" e_stop="37476" e_length="92"/>
          </exon>
          <intron i_serial="2" don_prob="0.998" acc_prob="0.998">
            <gDNA_intron_boundary i_start="37477" i_stop="37559" i_length="83"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="37560" e_stop="37664" e_length="105"/>
          </exon>
          <intron i_serial="3" don_prob="0.860" acc_prob="0.999">
            <gDNA_intron_boundary i_start="37665" i_stop="41369" i_length="3705"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="41370" e_stop="41455" e_length="86"/>
          </exon>
          <intron i_serial="4" don_prob="0.914" acc_prob="0.968">
            <gDNA_intron_boundary i_start="41456" i_stop="44406" i_length="2951"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="44407" e_stop="44648" e_length="242"/>
          </exon>
          <intron i_serial="5" don_prob="0.959" acc_prob="0.983">
            <gDNA_intron_boundary i_start="44649" i_stop="45978" i_length="1330"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="45979" e_stop="46060" e_length="82"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37050" stop="37250"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E317133" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37090" stop="37279"/>
              <exon start="37385" stop="37476"/>
              <exon start="37560" stop="37664"/>
              <exon start="41370" stop="41455"/>
              <exon start="44407" stop="44474"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E269627" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37569" stop="37664"/>
              <exon start="41370" stop="41455"/>
              <exon start="44407" stop="44648"/>
              <exon start="45979" stop="46060"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E207071" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTTCCAGCAAACACACTTGTCATCCTTGAGCCGATCTTGACTTTGGCCGCTATAACTTCTGGTAGCGTCTGCCTCAGCAAACTGTGACACTATATCACGTTTACAGCTCGAAGAGAGAAGCAGAGTACTGTGAAGAAGCGAAAAGGGGGGAGAATTGGGATTTCGGAAGAGCAGAAAATGGGAAACTCTCAGTCGAATTCAACGAATCCACGTTTTGATTTAGCCAAGAG : AGAGGAAATTGGAAGACTTGAAATCGTTGTTCGATTCACTAGCTGCACAATCACAGAGCAATGGAAAATACGTTTCTTCTTCTGTTTTCAAG : GCATATATTGGAGTTGAAGGGCCATTGGGTGATAGAATGTTCGATTTGGTCACCCAGAAGCGTAAGGATCAAAAGCTTACATATGAGGACCTTGTGATTGCTAAA : GGAACCTATGAAAAAGGGACAAATGCTGATATTGAAGAGTTTATCTATCAGTTGTTAGATGTCTTTGATGATGGCGTTGTTGGAAG : ATCAGATCTGGAAGCAGTCTTGACTGCAGTACTAAGAAATATATCTTCTCATGAGAGCCATCAATCTGAACCTAGTCCGGACAGGGAAATTCTCGACATTTTCCTCAATGCTGCAAATTTGACAACGGATGATACAAAATGCGCTGAAAGTTGTATGTCTTTTGAGGAATTTAAAAGTTGGTGTGCCCGTCTTCCATCAGTAAGGAAGTTTCTCGGAACTCTGTTGTCTACACGTGATTCAG : GCTCTGAGGTTCCTATGCTAGTATACCCAGAGAACATTGATCCTGCTGTAATATTGTTAAGAAAGGAATATGCTTGGCATAT</gDNA_template>
            <first_frame> F  P  A  N  T  L  V  I  L  E  P  I  L  T  L  A  A  I  T  S  G  S  V  C  L  S  K  L  *  H  Y  I  T  F  T  A  R  R  E  K  Q  S  T  V  K  K  R  K  G  G  R  I  G  I  S  E  E  Q  K  M  G  N  S  Q  S  N  S  T  N  P  R  F  D  L  A  K  R :   E  E  I  G  R  L  E  I  V  V  R  F  T  S  C  T  I  T  E  Q  W  K  I  R  F  F  F  C  F  Q   : G  I  Y  W  S  *  R  A  I  G  *  *  N  V  R  F  G  H  P  E  A  *  G  S  K  A  Y  I  *  G  P  C  D  C  *   : R  N  L  *  K  R  D  K  C  *  Y  *  R  V  Y  L  S  V  V  R  C  L  *  *  W  R  C  W  K  :  I  R  S  G  S  S  L  D  C  S  T  K  K  Y  I  F  S  *  E  P  S  I  *  T  *  S  G  Q  G  N  S  R  H  F  P  Q  C  C  K  F  D  N  G  *  Y  K  M  R  *  K  L  Y  V  F  *  G  I  *  K  L  V  C  P  S  S  I  S  K  E  V  S  R  N  S  V  V  Y  T  *  F  R :   L  *  G  S  Y  A  S  I  P  R  E  H  *  S  C  C  N  I  V  K  K  G  I  C  L  A  Y </first_frame>
            <second_frame>  F  Q  Q  T  H  L  S  S  L  S  R  S  *  L  W  P  L  *  L  L  V  A  S  A  S  A  N  C  D  T  I  S  R  L  Q  L  E  E  R  S  R  V  L  *  R  S  E  K  G  G  E  L  G  F  R  K  S  R  K  W  E  T  L  S  R  I  Q  R  I  H  V  L  I  *  P  R   : E  R  K  L  E  D  L  K  S  L  F  D  S  L  A  A  Q  S  Q  S  N  G  K  Y  V  S  S  S  V  F  K  :  A  Y  I  G  V  E  G  P  L  G  D  R  M  F  D  L  V  T  Q  K  R  K  D  Q  K  L  T  Y  E  D  L  V  I  A  K  :  G  T  Y  E  K  G  T  N  A  D  I  E  E  F  I  Y  Q  L  L  D  V  F  D  D  G  V  V  G  R :   S  D  L  E  A  V  L  T  A  V  L  R  N  I  S  S  H  E  S  H  Q  S  E  P  S  P  D  R  E  I  L  D  I  F  L  N  A  A  N  L  T  T  D  D  T  K  C  A  E  S  C  M  S  F  E  E  F  K  S  W  C  A  R  L  P  S  V  R  K  F  L  G  T  L  L  S  T  R  D  S   : G  S  E  V  P  M  L  V  Y  P  E  N  I  D  P  A  V  I  L  L  R  K  E  Y  A  W  H   </second_frame>
            <third_frame>   S  S  K  H  T  C  H  P  *  A  D  L  D  F  G  R  Y  N  F  W  *  R  L  P  Q  Q  T  V  T  L  Y  H  V  Y  S  S  K  R  E  A  E  Y  C  E  E  A  K  R  G  E  N  W  D  F  G  R  A  E  N  G  K  L  S  V  E  F  N  E  S  T  F  *  F  S  Q  E  :  R  G  N  W  K  T  *  N  R  C  S  I  H  *  L  H  N  H  R  A  M  E  N  T  F  L  L  L  F  S  R :   H  I  L  E  L  K  G  H  W  V  I  E  C  S  I  W  S  P  R  S  V  R  I  K  S  L  H  M  R  T  L  *  L  L  K :   E  P  M  K  K  G  Q  M  L  I  L  K  S  L  S  I  S  C  *  M  S  L  M  M  A  L  L  E   : D  Q  I  W  K  Q  S  *  L  Q  Y  *  E  I  Y  L  L  M  R  A  I  N  L  N  L  V  R  T  G  K  F  S  T  F  S  S  M  L  Q  I  *  Q  R  M  I  Q  N  A  L  K  V  V  C  L  L  R  N  L  K  V  G  V  P  V  F  H  Q  *  G  S  F  S  E  L  C  C  L  H  V  I  Q  :  A  L  R  F  L  C  *  Y  T  Q  R  T  L  I  L  L  *  Y  C  *  E  R  N  M  L  G  I  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0101H16.1" strand="+"/>
                <serials PGL_serial="12" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="37273" stop="37279"/>
                    <exon start="37385" stop="37476"/>
                    <exon start="37560" stop="37664"/>
                    <exon start="41370" stop="41455"/>
                    <exon start="44407" stop="44648"/>
                    <exon start="45979" stop="46058"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>612</number_coding_nucleotides>
                  <number_encoded_amino_acids>204</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PRERKLEDLKSLFDSLAAQSQSNGKYVSSSVFKAYIGVEGPLGDRMFDLVTQKRKDQKLTYEDLVIAKGTYEKGTNADIEEFIYQLLDVFDDGVVGRSDLEAVLTAVLRNISSHESHQSEPSPDREILDIFLNAANLTTDDTKCAESCMSFEEFKSWCARLPSVRKFLGTLLSTRDSGSEVPMLVYPENIDPAVILLRKEYAWH</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="-" PGL_start="50148" PGL_stop="48956"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="50148" e_stop="49465"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="50148" e_stop="49465" e_length="684"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="50148" stop="49541"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E734807" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="50147" stop="49570"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E339787" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="50141" stop="49472"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E714164" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="50138" stop="49530"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E370505" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="50137" stop="49668"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E280440" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="50136" stop="49497"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E723804" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="50126" stop="49465"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E250430" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="50124" stop="49676"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E238101" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="50123" stop="49512"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E734571" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="50116" stop="49482"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E289395" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="50101" stop="49516"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E348343" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="50098" stop="49558"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E713078" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="50091" stop="49530"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E311643" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49978" stop="49515"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E301946" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49978" stop="49515"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E301977" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49885" stop="49566"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E348318" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CCCTACAGAGCTCGAACCCCCCGCCCCTTCGCCGCCGTCCCGGTAAGTAGCAATGGGTCGTGTCCGTACAAAAACAGTGAAGAAATCTTCACGTCAAGTGATTGAGCGTTACTACTCAAAAATGACTTTAGATTTCCACACAAACAAGAAGATTCTCGAAGAAGTTGCTATCATCCCATCGAAGCGTCTCCGCAACAAGATCGCTGGATTCTCTACTCATCTGATGAAGCGAATCCAAAAAGGTCCGGTTAGAGGCATTTCTCTTAAGCTACAAGAGGAAGAGAGAGAACGCCGTATGGACTTCGTTCCTGATGAATCTGCTATTAATACTGAGAGGATTGAAGTTGATAAGGAAACTATTGACTTGCTTGCTTCAATGGGTATGAGCGAATTACCTGGTGTTGTACTCAAAGAAGAGCAGACGGTGGCTATTGCTGGACCTGTTGGTGGATTTGGCGGTGGTCGTGGTGGGTTCGGCGGCGGACGTGGAGGTCGTGGTGGTTACTGAGATCGGTTTGTTCGTTTTTTTTTTGGTTATGAGAAGTTATTTTTGCTGAATTGTAGACTTGATTTTATCTGATTATTGTTTAAATTTGGGATTTTGTGAACTAATTTAGTATTTTTGAATCTCTGAGTAATGTGCATTTCTCTCTATGAATTGAATATTGCATTTTTACCAAGCTT</gDNA_template>
            <first_frame> P  Y  R  A  R  T  P  R  P  F  A  A  V  P  V  S  S  N  G  S  C  P  Y  K  N  S  E  E  I  F  T  S  S  D  *  A  L  L  L  K  N  D  F  R  F  P  H  K  Q  E  D  S  R  R  S  C  Y  H  P  I  E  A  S  P  Q  Q  D  R  W  I  L  Y  S  S  D  E  A  N  P  K  R  S  G  *  R  H  F  S  *  A  T  R  G  R  E  R  T  P  Y  G  L  R  S  *  *  I  C  Y  *  Y  *  E  D  *  S  *  *  G  N  Y  *  L  A  C  F  N  G  Y  E  R  I  T  W  C  C  T  Q  R  R  A  D  G  G  Y  C  W  T  C  W  W  I  W  R  W  S  W  W  V  R  R  R  T  W  R  S  W  W  L  L  R  S  V  C  S  F  F  F  W  L  *  E  V  I  F  A  E  L  *  T  *  F  Y  L  I  I  V  *  I  W  D  F  V  N  *  F  S  I  F  E  S  L  S  N  V  H  F  S  L  *  I  E  Y  C  I  F  T  K  L </first_frame>
            <second_frame>  P  T  E  L  E  P  P  A  P  S  P  P  S  R  *  V  A  M  G  R  V  R  T  K  T  V  K  K  S  S  R  Q  V  I  E  R  Y  Y  S  K  M  T  L  D  F  H  T  N  K  K  I  L  E  E  V  A  I  I  P  S  K  R  L  R  N  K  I  A  G  F  S  T  H  L  M  K  R  I  Q  K  G  P  V  R  G  I  S  L  K  L  Q  E  E  E  R  E  R  R  M  D  F  V  P  D  E  S  A  I  N  T  E  R  I  E  V  D  K  E  T  I  D  L  L  A  S  M  G  M  S  E  L  P  G  V  V  L  K  E  E  Q  T  V  A  I  A  G  P  V  G  G  F  G  G  G  R  G  G  F  G  G  G  R  G  G  R  G  G  Y  *  D  R  F  V  R  F  F  F  G  Y  E  K  L  F  L  L  N  C  R  L  D  F  I  *  L  L  F  K  F  G  I  L  *  T  N  L  V  F  L  N  L  *  V  M  C  I  S  L  Y  E  L  N  I  A  F  L  P  S   </second_frame>
            <third_frame>   L  Q  S  S  N  P  P  P  L  R  R  R  P  G  K  *  Q  W  V  V  S  V  Q  K  Q  *  R  N  L  H  V  K  *  L  S  V  T  T  Q  K  *  L  *  I  S  T  Q  T  R  R  F  S  K  K  L  L  S  S  H  R  S  V  S  A  T  R  S  L  D  S  L  L  I  *  *  S  E  S  K  K  V  R  L  E  A  F  L  L  S  Y  K  R  K  R  E  N  A  V  W  T  S  F  L  M  N  L  L  L  I  L  R  G  L  K  L  I  R  K  L  L  T  C  L  L  Q  W  V  *  A  N  Y  L  V  L  Y  S  K  K  S  R  R  W  L  L  L  D  L  L  V  D  L  A  V  V  V  V  G  S  A  A  D  V  E  V  V  V  V  T  E  I  G  L  F  V  F  F  L  V  M  R  S  Y  F  C  *  I  V  D  L  I  L  S  D  Y  C  L  N  L  G  F  C  E  L  I  *  Y  F  *  I  S  E  *  C  A  F  L  S  M  N  *  I  L  H  F  Y  Q  A  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0101H16.1" strand="-"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="50102" stop="49641"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>459</number_coding_nucleotides>
                  <number_encoded_amino_acids>153</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VAMGRVRTKTVKKSSRQVIERYYSKMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAINTERIEVDKETIDLLASMGMSELPGVVLKEEQTVAIAGPVGGFGGGRGGFGGGRGGRGGY*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="50148" e_stop="49492"/>
            <exon e_start="48975" e_stop="48956"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.122" e_score="1.000"/>
          <exon-only e_score="0.550"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="50148" e_stop="49492" e_length="657"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.122">
            <gDNA_intron_boundary i_start="49491" i_stop="48976" i_length="516"/>
          </intron>
          <exon e_serial="2" e_score="0.550">
            <gDNA_exon_boundary e_start="48975" e_stop="48956" e_length="20"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="50148" stop="49541"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E734807" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="50147" stop="49570"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E339787" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="50138" stop="49530"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E370505" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="50137" stop="49668"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E280440" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="50136" stop="49497"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E723804" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="50124" stop="49676"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E238101" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="50123" stop="49512"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E734571" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="50101" stop="49516"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E348343" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="50098" stop="49558"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E713078" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="50091" stop="49530"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E311643" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49978" stop="49515"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E301946" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49978" stop="49515"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E301977" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49902" stop="49492"/>
              <exon start="48975" stop="48956"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E346881" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49885" stop="49566"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E348318" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CCCTACAGAGCTCGAACCCCCCGCCCCTTCGCCGCCGTCCCGGTAAGTAGCAATGGGTCGTGTCCGTACAAAAACAGTGAAGAAATCTTCACGTCAAGTGATTGAGCGTTACTACTCAAAAATGACTTTAGATTTCCACACAAACAAGAAGATTCTCGAAGAAGTTGCTATCATCCCATCGAAGCGTCTCCGCAACAAGATCGCTGGATTCTCTACTCATCTGATGAAGCGAATCCAAAAAGGTCCGGTTAGAGGCATTTCTCTTAAGCTACAAGAGGAAGAGAGAGAACGCCGTATGGACTTCGTTCCTGATGAATCTGCTATTAATACTGAGAGGATTGAAGTTGATAAGGAAACTATTGACTTGCTTGCTTCAATGGGTATGAGCGAATTACCTGGTGTTGTACTCAAAGAAGAGCAGACGGTGGCTATTGCTGGACCTGTTGGTGGATTTGGCGGTGGTCGTGGTGGGTTCGGCGGCGGACGTGGAGGTCGTGGTGGTTACTGAGATCGGTTTGTTCGTTTTTTTTTTGGTTATGAGAAGTTATTTTTGCTGAATTGTAGACTTGATTTTATCTGATTATTGTTTAAATTTGGGATTTTGTGAACTAATTTAGTATTTTTGAATCTCTGAGTAATGTGCATTTCTCTCTATGA : AATGGAGAACAATATGTAAA</gDNA_template>
            <first_frame> P  Y  R  A  R  T  P  R  P  F  A  A  V  P  V  S  S  N  G  S  C  P  Y  K  N  S  E  E  I  F  T  S  S  D  *  A  L  L  L  K  N  D  F  R  F  P  H  K  Q  E  D  S  R  R  S  C  Y  H  P  I  E  A  S  P  Q  Q  D  R  W  I  L  Y  S  S  D  E  A  N  P  K  R  S  G  *  R  H  F  S  *  A  T  R  G  R  E  R  T  P  Y  G  L  R  S  *  *  I  C  Y  *  Y  *  E  D  *  S  *  *  G  N  Y  *  L  A  C  F  N  G  Y  E  R  I  T  W  C  C  T  Q  R  R  A  D  G  G  Y  C  W  T  C  W  W  I  W  R  W  S  W  W  V  R  R  R  T  W  R  S  W  W  L  L  R  S  V  C  S  F  F  F  W  L  *  E  V  I  F  A  E  L  *  T  *  F  Y  L  I  I  V  *  I  W  D  F  V  N  *  F  S  I  F  E  S  L  S  N  V  H  F  S  L  *  :  N  G  E  Q  Y  V   </first_frame>
            <second_frame>  P  T  E  L  E  P  P  A  P  S  P  P  S  R  *  V  A  M  G  R  V  R  T  K  T  V  K  K  S  S  R  Q  V  I  E  R  Y  Y  S  K  M  T  L  D  F  H  T  N  K  K  I  L  E  E  V  A  I  I  P  S  K  R  L  R  N  K  I  A  G  F  S  T  H  L  M  K  R  I  Q  K  G  P  V  R  G  I  S  L  K  L  Q  E  E  E  R  E  R  R  M  D  F  V  P  D  E  S  A  I  N  T  E  R  I  E  V  D  K  E  T  I  D  L  L  A  S  M  G  M  S  E  L  P  G  V  V  L  K  E  E  Q  T  V  A  I  A  G  P  V  G  G  F  G  G  G  R  G  G  F  G  G  G  R  G  G  R  G  G  Y  *  D  R  F  V  R  F  F  F  G  Y  E  K  L  F  L  L  N  C  R  L  D  F  I  *  L  L  F  K  F  G  I  L  *  T  N  L  V  F  L  N  L  *  V  M  C  I  S  L  Y  E :   M  E  N  N  M  *  </second_frame>
            <third_frame>   L  Q  S  S  N  P  P  P  L  R  R  R  P  G  K  *  Q  W  V  V  S  V  Q  K  Q  *  R  N  L  H  V  K  *  L  S  V  T  T  Q  K  *  L  *  I  S  T  Q  T  R  R  F  S  K  K  L  L  S  S  H  R  S  V  S  A  T  R  S  L  D  S  L  L  I  *  *  S  E  S  K  K  V  R  L  E  A  F  L  L  S  Y  K  R  K  R  E  N  A  V  W  T  S  F  L  M  N  L  L  L  I  L  R  G  L  K  L  I  R  K  L  L  T  C  L  L  Q  W  V  *  A  N  Y  L  V  L  Y  S  K  K  S  R  R  W  L  L  L  D  L  L  V  D  L  A  V  V  V  V  G  S  A  A  D  V  E  V  V  V  V  T  E  I  G  L  F  V  F  F  L  V  M  R  S  Y  F  C  *  I  V  D  L  I  L  S  D  Y  C  L  N  L  G  F  C  E  L  I  *  Y  F  *  I  S  E  *  C  A  F  L  S  M   : K  W  R  T  I  C  K </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0101H16.1" strand="-"/>
                <serials PGL_serial="13" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="50102" stop="49641"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>459</number_coding_nucleotides>
                  <number_encoded_amino_acids>153</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VAMGRVRTKTVKKSSRQVIERYYSKMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAINTERIEVDKETIDLLASMGMSELPGVVLKEEQTVAIAGPVGGFGGGRGGFGGGRGGRGGY*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="+" PGL_start="49785" PGL_stop="50135"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="49785" e_stop="50135"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.980"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.980">
            <gDNA_exon_boundary e_start="49785" e_stop="50135" e_length="351"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49785" stop="50135"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E277789" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTCAATAGTTTCCTTATCAACTTCAATCCTCTCAGTATTAATAGCAGATTCATCAGGAACGAAGTCCATACGGCGTTCTCTCTCTTCCTCTTGTAGCTTAAGAGAAATGCCTCTAACCGGACCTTTTTGGATTCGCTTCATCAGATGAGTAGAGAATCCAGCGATCTTGTTGCGGAGACGCTTCGATGGGATGATAGCAACTTCTTCGAGAATCTTCTTGTTTGTGTGGAAATCTAAAGTCATTTTTGAGTAGTAACGCTCAATCACTTGACGTGAAGATTTCTTCACTGTTTTTGTACGGACACGACCCATTGCTACTTACCGGGACGGCGGCGAAGGGGCGGGGGGTTC</gDNA_template>
            <first_frame> V  N  S  F  L  I  N  F  N  P  L  S  I  N  S  R  F  I  R  N  E  V  H  T  A  F  S  L  F  L  L  *  L  K  R  N  A  S  N  R  T  F  L  D  S  L  H  Q  M  S  R  E  S  S  D  L  V  A  E  T  L  R  W  D  D  S  N  F  F  E  N  L  L  V  C  V  E  I  *  S  H  F  *  V  V  T  L  N  H  L  T  *  R  F  L  H  C  F  C  T  D  T  T  H  C  Y  L  P  G  R  R  R  R  G  G  G  F </first_frame>
            <second_frame>  S  I  V  S  L  S  T  S  I  L  S  V  L  I  A  D  S  S  G  T  K  S  I  R  R  S  L  S  S  S  C  S  L  R  E  M  P  L  T  G  P  F  W  I  R  F  I  R  *  V  E  N  P  A  I  L  L  R  R  R  F  D  G  M  I  A  T  S  S  R  I  F  L  F  V  W  K  S  K  V  I  F  E  *  *  R  S  I  T  *  R  E  D  F  F  T  V  F  V  R  T  R  P  I  A  T  Y  R  D  G  G  E  G  A  G  G   </second_frame>
            <third_frame>   Q  *  F  P  Y  Q  L  Q  S  S  Q  Y  *  *  Q  I  H  Q  E  R  S  P  Y  G  V  L  S  L  P  L  V  A  *  E  K  C  L  *  P  D  L  F  G  F  A  S  S  D  E  *  R  I  Q  R  S  C  C  G  D  A  S  M  G  *  *  Q  L  L  R  E  S  S  C  L  C  G  N  L  K  S  F  L  S  S  N  A  Q  S  L  D  V  K  I  S  S  L  F  L  Y  G  H  D  P  L  L  L  T  G  T  A  A  K  G  R  G  V  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02SLe0101H16.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="15" PGL_strand="-" PGL_start="55131" PGL_stop="53149"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="55131" e_stop="55049"/>
            <exon e_start="54497" e_stop="54220"/>
            <exon e_start="53654" e_stop="53149"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.982" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="55131" e_stop="55049" e_length="83"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.999">
            <gDNA_intron_boundary i_start="55048" i_stop="54498" i_length="551"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="54497" e_stop="54220" e_length="278"/>
          </exon>
          <intron i_serial="2" don_prob="0.982" acc_prob="0.999">
            <gDNA_intron_boundary i_start="54219" i_stop="53655" i_length="565"/>
          </intron>
          <exon e_serial="3" e_score="0.996">
            <gDNA_exon_boundary e_start="53654" e_stop="53149" e_length="506"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55131" stop="55049"/>
              <exon start="54497" stop="54220"/>
              <exon start="53654" stop="53149"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E730759" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55122" stop="55049"/>
              <exon start="54497" stop="54220"/>
              <exon start="53654" stop="53464"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E347075" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GCTTAGAACTTCCTCTCTTATTTCCAAGAAAAATTGTTAAAAATGAATGGCTATTCCTCTCCTATAGCTCACACAAGCAGAAG : ATTAGAAGGGAAAGTAGCTATTGTAACAGGAGGAGCTAGTGGATTTGGAGAAAGTACAGTAAGACTTTTCTTACAAAATGGTGCAAAAGTTGTAATAGCTGATGTTCAAGATGAAATTGGACAATCTCTTTGCAATGATCTCCTCAATTGTCCTAAAAATAAAAACAATGATTTTACATACATACATTGTGATGTAACAAAGGTCTCCGACGTCGAAAACCTTATCGACGCAACAATTTCCAAGTATGGAAAACTCGATATCATGTTCAACAACGCAG : GAATTCCGGGGAATCTCGATTTCAACATAATTGACGCAGATAACGAGAATTTCAAAAAGGTATTTGACGTTAACGTGTACGGATCATTTCTCGGTGCGAAATATGCTGCCCGGGTCATGATCCCAGAAAAGAAAGGTGTCATTCTTTTTACGTCTAGTTTGGCCTCCGTTTCCTCGGGTGAATCACCGCATTCATACACCGCCTCGAAACACGCGGTGGTGGGACTCACGAAGAATTTATGTGCCGAATTAGGGCAACACGGGATAAGAGTGAACTGCGTCTCGCCGTGCGCGGTGGCGACACCGATGTTAGTGAAGGCGATGGGTGTCGATAAGAGCGTCGTGGACGGAATAATTTGCTCGTCGGCGAATTTAAAAGGGGTGGCTCCGACGGCAGAGGATGTGGCGGAGGCGGCGTTGTATTTGGCAAGTGATGAGTCTAAGTTTGTAAGCGGAGTTAACCTAGTGATTGATGGAGGTTATAGTACTACTAATATGAGTTACATA</gDNA_template>
            <first_frame> A  *  N  F  L  S  Y  F  Q  E  K  L  L  K  M  N  G  Y  S  S  P  I  A  H  T  S  R  R :   L  E  G  K  V  A  I  V  T  G  G  A  S  G  F  G  E  S  T  V  R  L  F  L  Q  N  G  A  K  V  V  I  A  D  V  Q  D  E  I  G  Q  S  L  C  N  D  L  L  N  C  P  K  N  K  N  N  D  F  T  Y  I  H  C  D  V  T  K  V  S  D  V  E  N  L  I  D  A  T  I  S  K  Y  G  K  L  D  I  M  F  N  N  A   : G  I  P  G  N  L  D  F  N  I  I  D  A  D  N  E  N  F  K  K  V  F  D  V  N  V  Y  G  S  F  L  G  A  K  Y  A  A  R  V  M  I  P  E  K  K  G  V  I  L  F  T  S  S  L  A  S  V  S  S  G  E  S  P  H  S  Y  T  A  S  K  H  A  V  V  G  L  T  K  N  L  C  A  E  L  G  Q  H  G  I  R  V  N  C  V  S  P  C  A  V  A  T  P  M  L  V  K  A  M  G  V  D  K  S  V  V  D  G  I  I  C  S  S  A  N  L  K  G  V  A  P  T  A  E  D  V  A  E  A  A  L  Y  L  A  S  D  E  S  K  F  V  S  G  V  N  L  V  I  D  G  G  Y  S  T  T  N  M  S  Y  I </first_frame>
            <second_frame>  L  R  T  S  S  L  I  S  K  K  N  C  *  K  *  M  A  I  P  L  L  *  L  T  Q  A  E   : D  *  K  G  K  *  L  L  *  Q  E  E  L  V  D  L  E  K  V  Q  *  D  F  S  Y  K  M  V  Q  K  L  *  *  L  M  F  K  M  K  L  D  N  L  F  A  M  I  S  S  I  V  L  K  I  K  T  M  I  L  H  T  Y  I  V  M  *  Q  R  S  P  T  S  K  T  L  S  T  Q  Q  F  P  S  M  E  N  S  I  S  C  S  T  T  Q  :  E  F  R  G  I  S  I  S  T  *  L  T  Q  I  T  R  I  S  K  R  Y  L  T  L  T  C  T  D  H  F  S  V  R  N  M  L  P  G  S  *  S  Q  K  R  K  V  S  F  F  L  R  L  V  W  P  P  F  P  R  V  N  H  R  I  H  T  P  P  R  N  T  R  W  W  D  S  R  R  I  Y  V  P  N  *  G  N  T  G  *  E  *  T  A  S  R  R  A  R  W  R  H  R  C  *  *  R  R  W  V  S  I  R  A  S  W  T  E  *  F  A  R  R  R  I  *  K  G  W  L  R  R  Q  R  M  W  R  R  R  R  C  I  W  Q  V  M  S  L  S  L  *  A  E  L  T  *  *  L  M  E  V  I  V  L  L  I  *  V  T   </second_frame>
            <third_frame>   L  E  L  P  L  L  F  P  R  K  I  V  K  N  E  W  L  F  L  S  Y  S  S  H  K  Q  K  :  I  R  R  E  S  S  Y  C  N  R  R  S  *  W  I  W  R  K  Y  S  K  T  F  L  T  K  W  C  K  S  C  N  S  *  C  S  R  *  N  W  T  I  S  L  Q  *  S  P  Q  L  S  *  K  *  K  Q  *  F  Y  I  H  T  L  *  C  N  K  G  L  R  R  R  K  P  Y  R  R  N  N  F  Q  V  W  K  T  R  Y  H  V  Q  Q  R  R :   N  S  G  E  S  R  F  Q  H  N  *  R  R  *  R  E  F  Q  K  G  I  *  R  *  R  V  R  I  I  S  R  C  E  I  C  C  P  G  H  D  P  R  K  E  R  C  H  S  F  Y  V  *  F  G  L  R  F  L  G  *  I  T  A  F  I  H  R  L  E  T  R  G  G  G  T  H  E  E  F  M  C  R  I  R  A  T  R  D  K  S  E  L  R  L  A  V  R  G  G  D  T  D  V  S  E  G  D  G  C  R  *  E  R  R  G  R  N  N  L  L  V  G  E  F  K  R  G  G  S  D  G  R  G  C  G  G  G  G  V  V  F  G  K  *  *  V  *  V  C  K  R  S  *  P  S  D  *  W  R  L  *  Y  Y  *  Y  E  L  H  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0101H16.1" strand="-"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="55125" stop="55049"/>
                    <exon start="54497" stop="54220"/>
                    <exon start="53654" stop="53149"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>861</number_coding_nucleotides>
                  <number_encoded_amino_acids>287</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NFLSYFQEKLLKMNGYSSPIAHTSRRLEGKVAIVTGGASGFGESTVRLFLQNGAKVVIADVQDEIGQSLCNDLLNCPKNKNNDFTYIHCDVTKVSDVENLIDATISKYGKLDIMFNNAGIPGNLDFNIIDADNENFKKVFDVNVYGSFLGAKYAARVMIPEKKGVILFTSSLASVSSGESPHSYTASKHAVVGLTKNLCAELGQHGIRVNCVSPCAVATPMLVKAMGVDKSVVDGIICSSANLKGVAPTAEDVAEAALYLASDESKFVSGVNLVIDGGYSTTNMSYI</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="55121" e_stop="55049"/>
            <exon e_start="54497" e_stop="54104"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="55121" e_stop="55049" e_length="73"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.999">
            <gDNA_intron_boundary i_start="55048" i_stop="54498" i_length="551"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="54497" e_stop="54104" e_length="394"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55121" stop="55049"/>
              <exon start="54497" stop="54104"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E266614" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCCTCTCTTATTTCCAAGAAAAATTGTTAAAAATGAATGGCTATTCCTCTCCTATAGCTCACACAAGCAGAAG : ATTAGAAGGGAAAGTAGCTATTGTAACAGGAGGAGCTAGTGGATTTGGAGAAAGTACAGTAAGACTTTTCTTACAAAATGGTGCAAAAGTTGTAATAGCTGATGTTCAAGATGAAATTGGACAATCTCTTTGCAATGATCTCCTCAATTGTCCTAAAAATAAAAACAATGATTTTACATACATACATTGTGATGTAACAAAGGTCTCCGACGTCGAAAACCTTATCGACGCAACAATTTCCAAGTATGGAAAACTCGATATCATGTTCAACAACGCAGGTAGGAATGTTAAATGAGCGGTTTAATTGATTTTATATAGGTTAAATTAAGCTATATGTAATTAATACATAGACAATGACCTCTAAAGGTTTCTTGAGTTGAATGAACAGAAAAAA</gDNA_template>
            <first_frame> S  S  L  I  S  K  K  N  C  *  K  *  M  A  I  P  L  L  *  L  T  Q  A  E   : D  *  K  G  K  *  L  L  *  Q  E  E  L  V  D  L  E  K  V  Q  *  D  F  S  Y  K  M  V  Q  K  L  *  *  L  M  F  K  M  K  L  D  N  L  F  A  M  I  S  S  I  V  L  K  I  K  T  M  I  L  H  T  Y  I  V  M  *  Q  R  S  P  T  S  K  T  L  S  T  Q  Q  F  P  S  M  E  N  S  I  S  C  S  T  T  Q  V  G  M  L  N  E  R  F  N  *  F  Y  I  G  *  I  K  L  Y  V  I  N  T  *  T  M  T  S  K  G  F  L  S  *  M  N  R  K   </first_frame>
            <second_frame>  P  L  L  F  P  R  K  I  V  K  N  E  W  L  F  L  S  Y  S  S  H  K  Q  K  :  I  R  R  E  S  S  Y  C  N  R  R  S  *  W  I  W  R  K  Y  S  K  T  F  L  T  K  W  C  K  S  C  N  S  *  C  S  R  *  N  W  T  I  S  L  Q  *  S  P  Q  L  S  *  K  *  K  Q  *  F  Y  I  H  T  L  *  C  N  K  G  L  R  R  R  K  P  Y  R  R  N  N  F  Q  V  W  K  T  R  Y  H  V  Q  Q  R  R  *  E  C  *  M  S  G  L  I  D  F  I  *  V  K  L  S  Y  M  *  L  I  H  R  Q  *  P  L  K  V  S  *  V  E  *  T  E  K  </second_frame>
            <third_frame>   L  S  Y  F  Q  E  K  L  L  K  M  N  G  Y  S  S  P  I  A  H  T  S  R  R :   L  E  G  K  V  A  I  V  T  G  G  A  S  G  F  G  E  S  T  V  R  L  F  L  Q  N  G  A  K  V  V  I  A  D  V  Q  D  E  I  G  Q  S  L  C  N  D  L  L  N  C  P  K  N  K  N  N  D  F  T  Y  I  H  C  D  V  T  K  V  S  D  V  E  N  L  I  D  A  T  I  S  K  Y  G  K  L  D  I  M  F  N  N  A  G  R  N  V  K  *  A  V  *  L  I  L  Y  R  L  N  *  A  I  C  N  *  Y  I  D  N  D  L  *  R  F  L  E  L  N  E  Q  K  K </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0101H16.1" strand="-"/>
                <serials PGL_serial="15" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="55119" stop="55049"/>
                    <exon start="54497" stop="54203"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>363</number_coding_nucleotides>
                  <number_encoded_amino_acids>121</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LSYFQEKLLKMNGYSSPIAHTSRRLEGKVAIVTGGASGFGESTVRLFLQNGAKVVIADVQDEIGQSLCNDLLNCPKNKNNDFTYIHCDVTKVSDVENLIDATISKYGKLDIMFNNAGRNVK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="16" PGL_strand="+" PGL_start="60402" PGL_stop="60914"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="60402" e_stop="60914"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="60402" e_stop="60914" e_length="513"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60402" stop="60914"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E331059" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="16" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AACATATCTGTCATTTGTTTGCTTCAATCTAAACCTTCTTAAACTTTTTGTGTTGTAGTAAATGAATACCTCTGCATTGACCGACATATTTGAATCAAAGCATAATTCCTTCAAATTACTAGATCGGGACTTGGTGAAGAGTAGCAAAACAAGCATAATTCATTTCTTGATTGCTCATCCTCCATCTCTCTTCTCAGAATTCTTCTAATAAAGGTACGCTACATTTATACATTTGCTAATCAGAGAAAAAAGCAAGTTCGTAAATTTTTCTTTCTGTTTTATTTTTTGCAGATTTTTATGTTTTTTGTTTCAGATTTAGCTCATTTTCATGGATTTGGGGAGTCCCAAAGCCTGTAGGTCATATTATGCACTTCTGTTTTGTTGCTTCGCAACTAATTTTTTCAATTTATGTCTTAGACAAGTTCATTATAATTCACGAATATCTTCGTACTGTATCTGCTTCAACTAAGACTCATTCTGATTTATATATATATATATATATATATATATATG</gDNA_template>
            <first_frame> N  I  S  V  I  C  L  L  Q  S  K  P  S  *  T  F  C  V  V  V  N  E  Y  L  C  I  D  R  H  I  *  I  K  A  *  F  L  Q  I  T  R  S  G  L  G  E  E  *  Q  N  K  H  N  S  F  L  D  C  S  S  S  I  S  L  L  R  I  L  L  I  K  V  R  Y  I  Y  T  F  A  N  Q  R  K  K  Q  V  R  K  F  F  F  L  F  Y  F  L  Q  I  F  M  F  F  V  S  D  L  A  H  F  H  G  F  G  E  S  Q  S  L  *  V  I  L  C  T  S  V  L  L  L  R  N  *  F  F  Q  F  M  S  *  T  S  S  L  *  F  T  N  I  F  V  L  Y  L  L  Q  L  R  L  I  L  I  Y  I  Y  I  Y  I  Y  I  Y  M </first_frame>
            <second_frame>  T  Y  L  S  F  V  C  F  N  L  N  L  L  K  L  F  V  L  *  *  M  N  T  S  A  L  T  D  I  F  E  S  K  H  N  S  F  K  L  L  D  R  D  L  V  K  S  S  K  T  S  I  I  H  F  L  I  A  H  P  P  S  L  F  S  E  F  F  *  *  R  Y  A  T  F  I  H  L  L  I  R  E  K  S  K  F  V  N  F  S  F  C  F  I  F  C  R  F  L  C  F  L  F  Q  I  *  L  I  F  M  D  L  G  S  P  K  A  C  R  S  Y  Y  A  L  L  F  C  C  F  A  T  N  F  F  N  L  C  L  R  Q  V  H  Y  N  S  R  I  S  S  Y  C  I  C  F  N  *  D  S  F  *  F  I  Y  I  Y  I  Y  I  Y  I   </second_frame>
            <third_frame>   H  I  C  H  L  F  A  S  I  *  T  F  L  N  F  L  C  C  S  K  *  I  P  L  H  *  P  T  Y  L  N  Q  S  I  I  P  S  N  Y  *  I  G  T  W  *  R  V  A  K  Q  A  *  F  I  S  *  L  L  I  L  H  L  S  S  Q  N  S  S  N  K  G  T  L  H  L  Y  I  C  *  S  E  K  K  A  S  S  *  I  F  L  S  V  L  F  F  A  D  F  Y  V  F  C  F  R  F  S  S  F  S  W  I  W  G  V  P  K  P  V  G  H  I  M  H  F  C  F  V  A  S  Q  L  I  F  S  I  Y  V  L  D  K  F  I  I  I  H  E  Y  L  R  T  V  S  A  S  T  K  T  H  S  D  L  Y  I  Y  I  Y  I  Y  I  Y  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0101H16.1" strand="+"/>
                <serials PGL_serial="16" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="60665" stop="60913"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>249</number_coding_nucleotides>
                  <number_encoded_amino_acids>83</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IFLSVLFFADFYVFCFRFSSFSWIWGVPKPVGHIMHFCFVASQLIFSIYVLDKFIIIHEYLRTVSASTKTHSDLYIYIYIYIY</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0101H16.1" strand="+"/>
                <serials PGL_serial="16" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="60546" stop="60758"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>210</number_coding_nucleotides>
                  <number_encoded_amino_acids>70</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QNKHNSFLDCSSSISLLRILLIKVRYIYTFANQRKKQVRKFFFLFYFLQIFMFFVSDLAHFHGFGESQSL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="17" PGL_strand="-" PGL_start="75402" PGL_stop="74311"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="75402" e_stop="74311"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="75402" e_stop="74311" e_length="1092"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75402" stop="74775"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E544144" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75401" stop="74764"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E307002" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75123" stop="74311"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E544143" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="17" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GTTCCTTCTAGTTTTTATTATATGATTCTTCTTACTTGCATATATGATTTATTTTAGCTTATCAATTTGATAAATAGCTCCAAATTTGCTGTGTAATAAAGGGAAAGAGGCATTTTCTTTTGGATTGATTAATGTTGCAATTATAATAAATAAATTGAAACGGAGAAAGGAATAAACAATGCTCCTCCCTGTAAGGAACAATCGTTGAGTGAATTGTATCTTTTTTGTGTTAGTTGAATTAAGCGCCCAAGTGATTTTATTCCAAACGTTCTAAACCTAAGTAATTGAAAAGTAGAATTGGATAGATTTTGTTAAAATTCAAATCAGTGCATTGACACTGACGCTTGGGTTGAGCTTAGCAGCCTATTATGTAAGAAATTCGATTAATGGGAGTGTTGAGTAACAACCAAGTGTGTTTGGTATGACAGGAGTTATTTAAGGGTCAATCCTAGTTGGTACCGCTTTGGATGTTGGAGAAATTGATTGTTAGTAATTGTTGAGGGTATTAGTGTAGTTCGTTAATTTTTTGTGACATATGCAAGCATGCAAGGTCAATAAAGCATTATAATTCGAACAAAAATGAAAGCTCATTGTAAAGGTCAGTGAGATCAGAGATGTTTTTCTTTTTTTAATTTTGAGTGTAGCTTGCTTCTTTCTTTTAACTACAGAAGAATCACGTGTGAAGATGAAAATAAGTACTTAAAATTGTGTGTCTTAAACCTCTGAAACCATATATGCTGGAAATTTTGTAGTTTCTGCAGCTGCGAAGTTTTCCTCATCTTGTCTGCAAATAAGTGAAACATTTGTAATTTCCCATTTTCATAATCTGGTCCTGAACAACAGGAAAAGAAACCTCTTTTTCTGCTTGATAAATGACCAAGTAAGAGTATTTTCCTTCTGGGCGTTTCTCTTATCAGGTTGAACATTGTCAAAACCTTTTTTCTTCCCCCCTGTCTGAAGTTTAGAGTCATATGAGGCAGTATGAAGTGGTTTGAGCTGCTTGTCTTTCTTAGAATGTATTCTTATTTCCGAAAGATAACAAAAATGAAGCATGTAATTTATTATCACTTATGCTAAATCACAAAAAAAAAA</gDNA_template>
            <first_frame> V  P  S  S  F  Y  Y  M  I  L  L  T  C  I  Y  D  L  F  *  L  I  N  L  I  N  S  S  K  F  A  V  *  *  R  E  R  G  I  F  F  W  I  D  *  C  C  N  Y  N  K  *  I  E  T  E  K  G  I  N  N  A  P  P  C  K  E  Q  S  L  S  E  L  Y  L  F  C  V  S  *  I  K  R  P  S  D  F  I  P  N  V  L  N  L  S  N  *  K  V  E  L  D  R  F  C  *  N  S  N  Q  C  I  D  T  D  A  W  V  E  L  S  S  L  L  C  K  K  F  D  *  W  E  C  *  V  T  T  K  C  V  W  Y  D  R  S  Y  L  R  V  N  P  S  W  Y  R  F  G  C  W  R  N  *  L  L  V  I  V  E  G  I  S  V  V  R  *  F  F  V  T  Y  A  S  M  Q  G  Q  *  S  I  I  I  R  T  K  M  K  A  H  C  K  G  Q  *  D  Q  R  C  F  S  F  F  N  F  E  C  S  L  L  L  S  F  N  Y  R  R  I  T  C  E  D  E  N  K  Y  L  K  L  C  V  L  N  L  *  N  H  I  C  W  K  F  C  S  F  C  S  C  E  V  F  L  I  L  S  A  N  K  *  N  I  C  N  F  P  F  S  *  S  G  P  E  Q  Q  E  K  K  P  L  F  L  L  D  K  *  P  S  K  S  I  F  L  L  G  V  S  L  I  R  L  N  I  V  K  T  F  F  L  P  P  C  L  K  F  R  V  I  *  G  S  M  K  W  F  E  L  L  V  F  L  R  M  Y  S  Y  F  R  K  I  T  K  M  K  H  V  I  Y  Y  H  L  C  *  I  T  K  K  K </first_frame>
            <second_frame>  F  L  L  V  F  I  I  *  F  F  L  L  A  Y  M  I  Y  F  S  L  S  I  *  *  I  A  P  N  L  L  C  N  K  G  K  E  A  F  S  F  G  L  I  N  V  A  I  I  I  N  K  L  K  R  R  K  E  *  T  M  L  L  P  V  R  N  N  R  *  V  N  C  I  F  F  V  L  V  E  L  S  A  Q  V  I  L  F  Q  T  F  *  T  *  V  I  E  K  *  N  W  I  D  F  V  K  I  Q  I  S  A  L  T  L  T  L  G  L  S  L  A  A  Y  Y  V  R  N  S  I  N  G  S  V  E  *  Q  P  S  V  F  G  M  T  G  V  I  *  G  S  I  L  V  G  T  A  L  D  V  G  E  I  D  C  *  *  L  L  R  V  L  V  *  F  V  N  F  L  *  H  M  Q  A  C  K  V  N  K  A  L  *  F  E  Q  K  *  K  L  I  V  K  V  S  E  I  R  D  V  F  L  F  L  I  L  S  V  A  C  F  F  L  L  T  T  E  E  S  R  V  K  M  K  I  S  T  *  N  C  V  S  *  T  S  E  T  I  Y  A  G  N  F  V  V  S  A  A  A  K  F  S  S  S  C  L  Q  I  S  E  T  F  V  I  S  H  F  H  N  L  V  L  N  N  R  K  R  N  L  F  F  C  L  I  N  D  Q  V  R  V  F  S  F  W  A  F  L  L  S  G  *  T  L  S  K  P  F  F  F  P  P  V  *  S  L  E  S  Y  E  A  V  *  S  G  L  S  C  L  S  F  L  E  C  I  L  I  S  E  R  *  Q  K  *  S  M  *  F  I  I  T  Y  A  K  S  Q  K  K   </second_frame>
            <third_frame>   S  F  *  F  L  L  Y  D  S  S  Y  L  H  I  *  F  I  L  A  Y  Q  F  D  K  *  L  Q  I  C  C  V  I  K  G  K  R  H  F  L  L  D  *  L  M  L  Q  L  *  *  I  N  *  N  G  E  R  N  K  Q  C  S  S  L  *  G  T  I  V  E  *  I  V  S  F  L  C  *  L  N  *  A  P  K  *  F  Y  S  K  R  S  K  P  K  *  L  K  S  R  I  G  *  I  L  L  K  F  K  S  V  H  *  H  *  R  L  G  *  A  *  Q  P  I  M  *  E  I  R  L  M  G  V  L  S  N  N  Q  V  C  L  V  *  Q  E  L  F  K  G  Q  S  *  L  V  P  L  W  M  L  E  K  L  I  V  S  N  C  *  G  Y  *  C  S  S  L  I  F  C  D  I  C  K  H  A  R  S  I  K  H  Y  N  S  N  K  N  E  S  S  L  *  R  S  V  R  S  E  M  F  F  F  F  *  F  *  V  *  L  A  S  F  F  *  L  Q  K  N  H  V  *  R  *  K  *  V  L  K  I  V  C  L  K  P  L  K  P  Y  M  L  E  I  L  *  F  L  Q  L  R  S  F  P  H  L  V  C  K  *  V  K  H  L  *  F  P  I  F  I  I  W  S  *  T  T  G  K  E  T  S  F  S  A  *  *  M  T  K  *  E  Y  F  P  S  G  R  F  S  Y  Q  V  E  H  C  Q  N  L  F  S  S  P  L  S  E  V  *  S  H  M  R  Q  Y  E  V  V  *  A  A  C  L  S  *  N  V  F  L  F  P  K  D  N  K  N  E  A  C  N  L  L  S  L  M  L  N  H  K  K  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0101H16.1" strand="-"/>
                <serials PGL_serial="17" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="74684" stop="74481"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>201</number_coding_nucleotides>
                  <number_encoded_amino_acids>67</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TSETIYAGNFVVSAAAKFSSSCLQISETFVISHFHNLVLNNRKRNLFFCLINDQVRVFSFWAFLLSG*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="18" PGL_strand="-" PGL_start="81474" PGL_stop="81256"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="81474" e_stop="81256"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.927"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.927">
            <gDNA_exon_boundary e_start="81474" e_stop="81256" e_length="219"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81474" stop="81256"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E298638" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="18" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCATTACTCCGGATATCAGGGTGAGCTAATGTTTCTAGCTTGGACTGGATCTTCCTCTTCATGTCTTGATGCCTTGAAGTTCCGGCATGGACTAGCTTTTTATGTATTTTAGCTTCTTAGATACTCTTAGTTTTAGTAATTTGAAGTAGATGTTCTTGTGATGATGACTTCCAGATTTTGGGGATAATAATAGTTGTTGAGTTTTTAGAAGTTATTGAA</gDNA_template>
            <first_frame> S  L  L  R  I  S  G  *  A  N  V  S  S  L  D  W  I  F  L  F  M  S  *  C  L  E  V  P  A  W  T  S  F  L  C  I  L  A  S  *  I  L  L  V  L  V  I  *  S  R  C  S  C  D  D  D  F  Q  I  L  G  I  I  I  V  V  E  F  L  E  V  I  E </first_frame>
            <second_frame>  H  Y  S  G  Y  Q  G  E  L  M  F  L  A  W  T  G  S  S  S  S  C  L  D  A  L  K  F  R  H  G  L  A  F  Y  V  F  *  L  L  R  Y  S  *  F  *  *  F  E  V  D  V  L  V  M  M  T  S  R  F  W  G  *  *  *  L  L  S  F  *  K  L  L   </second_frame>
            <third_frame>   I  T  P  D  I  R  V  S  *  C  F  *  L  G  L  D  L  P  L  H  V  L  M  P  *  S  S  G  M  D  *  L  F  M  Y  F  S  F  L  D  T  L  S  F  S  N  L  K  *  M  F  L  *  *  *  L  P  D  F  G  D  N  N  S  C  *  V  F  R  S  Y  *  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02SLe0101H16.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="19" PGL_strand="-" PGL_start="82486" PGL_stop="81619"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="82486" e_stop="82254"/>
            <exon e_start="81982" e_stop="81916"/>
            <exon e_start="81839" e_stop="81619"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.948"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.970"/>
          <exon-only e_score="0.842"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.948">
            <gDNA_exon_boundary e_start="82486" e_stop="82254" e_length="233"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="82253" i_stop="81983" i_length="271"/>
          </intron>
          <exon e_serial="2" e_score="0.970">
            <gDNA_exon_boundary e_start="81982" e_stop="81916" e_length="67"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="81915" i_stop="81840" i_length="76"/>
          </intron>
          <exon e_serial="3" e_score="0.842">
            <gDNA_exon_boundary e_start="81839" e_stop="81619" e_length="221"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82486" stop="82254"/>
              <exon start="81982" stop="81916"/>
              <exon start="81839" stop="81619"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E242359" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="19" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CCTAATCTACTTTGTTAATGATGATGCCTTGGTATAAAAGAAGGCTGGATGAACGAAAGTAGTGAGATTAGGGGATCGGGTGCCACGTTCCGGTACCAGGATAGTATATGAGGATCGGAGTGTCACGTTCCGACACCAGGATAGAATATGGATCGGGTGCCACGTTCCGGTACCAAGATAGTATATGAGGATCGGAGTGTCACGTTCCGACACCAGGATAGAATATGGATCGG : GTGTCACGTTCCGACACCAGGATAGAATATGGATCGGGTGCCACGTTCCGGTACCAGGATAGTATAT : TGAGGAGCGAAGTGTCACGTACCGACACGAAAGGAATAAAGATAATGAATCTTGAAAAATGTTAATATACTCAATCTAATGAACCTAATTCCCAAATGAGTATGATGAGGAGGCGTGAGTCCTCATTGATGAGCTTGGTGTTATGACCAAGGGTTATGGTACTTGTAAATGCCGCATGTTGAGTATTGTAGTTGATTTTATGATATTATCTGATATATACT</gDNA_template>
            <first_frame> P  N  L  L  C  *  *  *  C  L  G  I  K  E  G  W  M  N  E  S  S  E  I  R  G  S  G  A  T  F  R  Y  Q  D  S  I  *  G  S  E  C  H  V  P  T  P  G  *  N  M  D  R  V  P  R  S  G  T  K  I  V  Y  E  D  R  S  V  T  F  R  H  Q  D  R  I  W  I  G :   C  H  V  P  T  P  G  *  N  M  D  R  V  P  R  S  G  T  R  I  V  Y  :  *  G  A  K  C  H  V  P  T  R  K  E  *  R  *  *  I  L  K  N  V  N  I  L  N  L  M  N  L  I  P  K  *  V  *  *  G  G  V  S  P  H  *  *  A  W  C  Y  D  Q  G  L  W  Y  L  *  M  P  H  V  E  Y  C  S  *  F  Y  D  I  I  *  Y  I   </first_frame>
            <second_frame>  L  I  Y  F  V  N  D  D  A  L  V  *  K  K  A  G  *  T  K  V  V  R  L  G  D  R  V  P  R  S  G  T  R  I  V  Y  E  D  R  S  V  T  F  R  H  Q  D  R  I  W  I  G  C  H  V  P  V  P  R  *  Y  M  R  I  G  V  S  R  S  D  T  R  I  E  Y  G  S   : G  V  T  F  R  H  Q  D  R  I  W  I  G  C  H  V  P  V  P  G  *  Y  I :   E  E  R  S  V  T  Y  R  H  E  R  N  K  D  N  E  S  *  K  M  L  I  Y  S  I  *  *  T  *  F  P  N  E  Y  D  E  E  A  *  V  L  I  D  E  L  G  V  M  T  K  G  Y  G  T  C  K  C  R  M  L  S  I  V  V  D  F  M  I  L  S  D  I  Y  </second_frame>
            <third_frame>   *  S  T  L  L  M  M  M  P  W  Y  K  R  R  L  D  E  R  K  *  *  D  *  G  I  G  C  H  V  P  V  P  G  *  Y  M  R  I  G  V  S  R  S  D  T  R  I  E  Y  G  S  G  A  T  F  R  Y  Q  D  S  I  *  G  S  E  C  H  V  P  T  P  G  *  N  M  D  R  :  V  S  R  S  D  T  R  I  E  Y  G  S  G  A  T  F  R  Y  Q  D  S  I   : L  R  S  E  V  S  R  T  D  T  K  G  I  K  I  M  N  L  E  K  C  *  Y  T  Q  S  N  E  P  N  S  Q  M  S  M  M  R  R  R  E  S  S  L  M  S  L  V  L  *  P  R  V  M  V  L  V  N  A  A  C  *  V  L  *  L  I  L  *  Y  Y  L  I  Y  T </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02SLe0101H16.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 256 chains have been computed
$ 
$ memory statistics:
$ 183976 bytes spliced alignments in total
$ 81 spliced alignments have been stored
$ 2271 bytes was the average size of a spliced alignment
$ 28720 bytes predicted gene locations in total
$ 19 predicted gene locations have been stored
$ 1511 bytes was the average size of a predicted gene location
$ 0 megabytes was the average size of the backtrace matrix
$ 321 backtrace matrices have been allocated
$ 
$ date finished: 2009-07-29 04:40:11
-->
