<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-12-01 11:26:43"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C02SLm0025E22-LbUfe/GenomeThreader_SGN_U_tomato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C02SLm0025E22-LbUfe/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0025E22-LbUfe/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U568807" ref_strand="+" ref_description="SGN-U568807 Tomato 200607#2 [5 ESTs aligned] (*GB) gi|157341254|emb|CAO49161.1| (e_value=5e-96) unnamed; (*ATH) AT5G15550.1 (e_value=2e-83)  Symbol: None | transducin family protein / WD-40 repeat family protein, similar to YTM1 - Homo sapiens, EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta repeat (7 copies,1 weak); | chr5:5058752-5062090 REVERSE | Aliases: T20K14.160, T20K14_16... ; (*SWP) sp|Q0VC24|WDR12_BOVIN (e_value=2e-26) WD repeat-containing protein 12 OS=Bos taurus GN=WDR12; ">
      <seq>gcccgtgaacgtctctaccctcacactccgcacccttctctctctctacacaatacttttttaatggcgggtatggacattgatggcaacgttgaagaggctgcaaggcgtgtacaggtccggttcgtcacgaagttgaaagcaccctttaaggctccgcctacttctattgctattccctctaatcttacccgattgggcctctcttccatcgtcaacaacctccttaaagccggaaatgatgattggaatcccgagccttttgattttctcattgatggggaactggtccgcatgtcacttgaagagtttctccttgccaagggcatttcagctgagaaaatattggagattgagtacattagagctgtggctccgaggaaagaagaagagccatctttgcatgacgattgggtcagtgcagttgatggttctaattccatgtttgttgtgactggatgttatgatggttttggaagaatatggatggctgctggatcttgtacgcatctactggagggccatactgatgcaattacttctgtttgtgttgtcaaaccaagagtggctcaaaatggtgctgatcaaatagtcgctacggcttccaaggataggacactgcgtctctggaagtttgatgcanatgagtcttcggatcanacaaagaggantagagcctttaanattttacntggacataatgcttccgtccaaagtgttacagcaaatcctgctgganatatggngtgttcnnntcctggnattcccnantag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0025E22-LbUfe/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0025E22.1" temp_strand="+" temp_description="C02SLm0025E22.1  AC215476.1 htgs_phase:3 submitted_to_sgn_as:C02SLm0025E22 sequenced_by:kribb upload_account_name:korea">
        <position start="15509" stop="19225"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15809" g_stop="16043" g_length="235"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="235" r_length="235" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16044" i_stop="16622" i_length="579">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16623" g_stop="16723" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="236" r_stop="336" r_length="101" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="16724" i_stop="17543" i_length="820">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="17544" g_stop="17650" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="337" r_stop="443" r_length="107" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="17651" i_stop="18136" i_length="486">
            <donor d_prob="0.958" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="18137" g_stop="18172" g_length="36"/>
          <reference_exon_boundary r_type="cDNA" r_start="444" r_stop="479" r_length="36" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="18173" i_stop="18253" i_length="81">
            <donor d_prob="0.986" d_score="0.00"/>
            <acceptor a_prob="0.678" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="18254" g_stop="18339" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="480" r_stop="565" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="18340" i_stop="18665" i_length="326">
            <donor d_prob="0.377" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="18666" g_stop="18733" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="566" r_stop="633" r_length="68" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="18734" i_stop="18813" i_length="80">
            <donor d_prob="0.736" d_score="1.00"/>
            <acceptor a_prob="0.580" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="18814" g_stop="18924" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="634" r_stop="744" r_length="111" r_score="0.946"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="18925" i_stop="19022" i_length="98">
            <donor d_prob="0.988" d_score="0.98"/>
            <acceptor a_prob="0.997" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="19023" g_stop="19053" g_length="31"/>
          <reference_exon_boundary r_type="cDNA" r_start="745" r_stop="774" r_length="30" r_score="0.742"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0025E22.1" gen_strand="+" ref_id="SGN-U568807" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>775</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0025E22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U568807" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15809" e_stop="16043"/>
          <exon e_start="16623" e_stop="16723"/>
          <exon e_start="17544" e_stop="17650"/>
          <exon e_start="18137" e_stop="18172"/>
          <exon e_start="18254" e_stop="18339"/>
          <exon e_start="18666" e_stop="18733"/>
          <exon e_start="18814" e_stop="18924"/>
          <exon e_start="19023" e_stop="19053"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCCCGTGAACGTCTCTACCCTCACACTCCGCACCCTTCTCTCTCTCTACACAATACTTTTTTAATGGCGGGTATGGACATTGATGGCAACGTTGAAGAGGCTGCAAGGCGTGTACAGGTCCGGTTCGTCACGAAGTTGAAAGCACCCTTTAAGGCTCCGCCTACTTCTATTGCTATTCCCTCTAATCTTACCCGATTGGGCCTCTCTTCCATCGTCAACAACCTCCTTAAAGCCGGTAACTTTTAGTTCTAACTGATTTTGTTAAGTGGAATGTGCTTATAGTATGGGACTTGGATGTGGTTGATTGATTGGTTGTGTCATTTAGTTTTGAGTTTATATGGAAGTGGATTTATTTTTTGTTTTAGAGAATTAATTATAATTACAGAGGATATGGTCGTTGATACTGAAATAGTTGCTTGTGGGTTAGAGTGGTTGTTGTATATAGCTCATGTAAATCGTCAATTTGGCTTAATTGATTGGTTTAACTCACTTGTTTAAGCTATGAGCTAGTAAATTGCTATAGATGAGTGTTTGTTAAGCTATATTGACAAGTTGAATAGGTTTTTGTTTATGGTACGAGAGCTTAGTTATTATGGGTCAACGGTGCCATAATTGAGTAACTTAGAAATGAATCTATCAAAATGTATATTGTGTCTAAATTTGGGATCATATATAGAAGAGGGGGTTTCATATTTAATTAAATAAAGGACCTGATCTTATGTATAATGGACTAGCACTGTACTATCTGCCCAGTGATTTTGCTATTTGTGTTTTTTACTAGTATGCTTACCTGTTTGCCATTTGATTTTATTAGGAAATGATGATTGGAATCCCGAGCCTTTTGATTTTCTCATTGATGGGGAACTGGTCCGCATGTCACTTGAAGAGTTTCTCCTTGCCAAGGGCATTTCAGCTGTAAGTTTCTTTCCTGAAAGAACTTCCTGACTGCTTGAATGACCACAGTTCCAGTTGTACTGTTTTGTTTCTTCAGACCAACAAAATAAAAAAATGCTTACGGAAGCTGGTTTTAATCTTGTTTCCAAACTCATAGAATGGACTGTTTTGTCTCTTCAGACCAACTCAAAGAAAAAGATACTTAAGGAAGGGGGCTAATCTTGTTTCCAGAAAAAAAACGTAAAATGAACTCTGTACATTTGTGTAAACATTGATTTTAAACACGAAAACAGAAGTGTATTAGTGGCCCGAGCTCGAGGTGAACTTGTACCAACATCTGGATTAGCTCAAATGTTGTCCCTCGTTGCTTGGATTTCGTTCTGACTCCACAGTAGTAGGTTTTGTTCTTTATATGCTTACAATTGTATCTCTAATTGGAGTTTCAAAGTTGTAGAAAAATCTAAAGTATTAACAGCTCTGTTTTAAAATTGTAGGTTGTAACAATAAATGCAAAAAATTGTAGTCAGTGTAGTTTAATGACAAAACTTTTTCTTTCTGGAAATGATTAGATAACCGAGTTATACTTATGAGGCGTTTGAAATAATTTTACGTATTGCAAAAAGATATACACACCTGAAGGTTCTAGAAGTACTGTTACTCTGTAATTCTAGTTCCCTCCTAGTTGTTTTTCTTATGTTCTTGTTCACTAGCCAGAAGTGACTTCTTTCAGAGTCACAAACCATTGAGATTTTTGACAATATATTTTACTTATGTTATTATACGTTTATTCAGTGGTTCTTCTACTCATCTTTCTTCCAACTGTTTTCTATATCTTTTACAGGAGAAAATATTGGAGATTGAGTACATTAGAGCTGTGGCTCCGAGGAAAGAAGAAGAGCCATCTTTGCATGACGATTGGGTCAGTGCAGTTGATGGTTCTAATTCCATGTAAGCATGAGTGTGAAATTTGTTTTTCTAGAATCTCAGTTTGATCCTTGTAATTTTTACCGCCTTGTATATCATTCTTTGTTTAATATATTTAAGATTTGGTGGTTGTATGCTAACTTTACTGAAAGACAATATTGGTTTATCCTAGCCAAAAAATAAAATAAAATAGAGCCAGCATAATATAACTAAATGGAGTGTTTGCATTTCTTTGTTTATTGTTTCTCTGTACCCTATTCTCCAGGTGTTGTGCATTGACATCACTCATAGTGTCTTTTACTCACTAGATTAATAAGGAACACATTGTTTTATATAATTACATTATGCTGCTATTGTCCCCTGTGTTTTGAAGGTAAATTTCATCCTCCATGTGCTTTTCCCCCCCTAAAATATTTGATGGTGACCGTTAATAATGTAATTAAAGGTCTTCTTTGCATACAATCAACTATTGCCTTAATTGACAAGATGTGCATATTTGTGATCTGACAGGTTTGTTGTGACTGGATGTTATGATGGTTTTGGAAGGTAACCTACTGAATTTTTACTCTTATGCTAATCGCCTTTTTTGGTTATTGTATCAACCTAACATTTGATAGTGCTAAACAGAATATGGATGGCTGCTGGATCTTGTACGCATCTACTGGAGGGCCATACTGATGCAATTACTTCTGTTTGTGTTGTCAAACCAAGAGGTATCACTGGGATATCTCAGTTGCTCATTGTCTAGCATTAGGCCTTATCGTCTGCTGCCGTTATCATTTACCTTGACACTATGTTCATACTCCCACATCACTTGCTCTTGATATTTCTTTTTTCTTTTTAATATTTCTTGTTGATATCCATTCTATTAACTTGCCTTGCAATACCGGAACCTACTGGATACCAAAAACTTTTACAGCATTACAATCATTATGGAGATATAGTTTGACTTTCTCCTGGATATGTACTTCTCTGTGCTTCATTTCTTCTGGAATTCTGTCTTTTTATTAATCATGCTTATACCTTTTATTTTCTGTAGTGGCTCAAAATGGTGCTGATCAAATAGTCGCTACGGCTTCCAAGGATAGGACACTGCGTCTCTGGAAGGTAAATGATGTGCCTGTGCTCCTTATAGCTCACTGCCTAATTCGTGATCTTCCCCTAATTAGTATTGTTTGGCTAAAAAGTTTGATGCAGATGAGTCTTCGGATCAGACAAAGAGGATTAGAGCCTTTAAGATTTTACATGGACATAATGCTTCCGTCCAAAGTGTTACAGCAAATCCTGCTGGAGATATGGTCATGCATCTCTTCACTTAATTGATCATTTAAGGCTTTTGATTATGAAATTGATTCTAATAACTCTTACTGAATCCCAGTATTTATTGCATTGACAGGTGTGTTCAGGGTCCTGGGATTCCCAAATAG</genome_strand>
        <mrna_strand>GCCCGTGAACGTCTCTACCCTCACACTCCGCACCCTTCTCTCTCTCTACACAATACTTTTTTAATGGCGGGTATGGACATTGATGGCAACGTTGAAGAGGCTGCAAGGCGTGTACAGGTCCGGTTCGTCACGAAGTTGAAAGCACCCTTTAAGGCTCCGCCTACTTCTATTGCTATTCCCTCTAATCTTACCCGATTGGGCCTCTCTTCCATCGTCAACAACCTCCTTAAAGCCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAATGATGATTGGAATCCCGAGCCTTTTGATTTTCTCATTGATGGGGAACTGGTCCGCATGTCACTTGAAGAGTTTCTCCTTGCCAAGGGCATTTCAGCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAAAATATTGGAGATTGAGTACATTAGAGCTGTGGCTCCGAGGAAAGAAGAAGAGCCATCTTTGCATGACGATTGGGTCAGTGCAGTTGATGGTTCTAATTCCAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTGTTGTGACTGGATGTTATGATGGTTTTGGAAG.................................................................................AATATGGATGGCTGCTGGATCTTGTACGCATCTACTGGAGGGCCATACTGATGCAATTACTTCTGTTTGTGTTGTCAAACCAAGAG......................................................................................................................................................................................................................................................................................................................................TGGCTCAAAATGGTGCTGATCAAATAGTCGCTACGGCTTCCAAGGATAGGACACTGCGTCTCTGGAAG................................................................................TTTGATGCANATGAGTCTTCGGATCANACAAAGAGGANTAGAGCCTTTAANATTTTACNTGGACATAATGCTTCCGTCCAAAGTGTTACAGCAAATCCTGCTGGANATATG..................................................................................................GNGTGTTC-NNNTCCTGGNATTCCCNANTAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0025E22-LbUfe/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U570244" ref_strand="+" ref_description="SGN-U570244 Tomato 200607#2 [10 ESTs aligned] (*GB) gi|157354946|emb|CAO48292.1| (e_value=5e-118) unnamed; (*ATH) AT5G66380.1 (e_value=1e-116)  Symbol: ATFOLT1 | Encodes a folate transporter that is located in the chloroplast envelope and is able to mediate exogenous folate uptake when expressed in E. coli.  However, this is not the sole folate transporter for chloroplasts as null mutants o... ; (*SWP) sp|Q8BMG8|MFTC_MOUSE (e_value=4e-54) Mitochondrial folate transporter/carrier OS=Mus musculus GN=Slc25a32; ">
      <seq>ggaaaagcacacgaacaatcatcagatagtacaatttgatacgcgacgactcccacaacttttattatatatatggagacgcgaaagagactattctaataggcgcaagctgttgacatgttggacgtcaccagtaggtcaatacaacaccctttcgtctgcgcaggaaggcccgcctcatttctttttgcatagacggcaaaaagaaaagcgttgggaacaagggggaaaggaagccaacggttgatagagccatgaaaaagatggcagctttgccatcggcagactgggaatgggaaaatgccaccgccggtgctgctgcaggccttgccactgtcacattctctcatccccttgatgttgttcgcacccggttccaggtttacgatggaagaatctccaatgtcccggcctatcggaacactcctcacgctttgtttgccattgctcgaagtgagggtcttagaggactttatgctggcttttaccctgctgttctcaggtcaactatttcatggggtttatattttttcttttatagcaaggctaagcaaaggtatctaagaaacagggaggagctgagtcctggccttcaccttgcttcagctgcagaagcaggagcgctggtctgtctttgcaccaaccccatttggcttgtgaaaacaagattgcaacttcagactcctaatcagattcgtccatacaccggatttcatgatgctttaagaacgataatcaaagaagaaggatggagggcactgtacaaggggcttatgccaagcctatttctgattacacatggtgctattcagttcacggcatatgaggaattccgcaaagtcattcttagctcgaaagctcaggagaatgaaaaccctcttgccacagctgctgacttgttggattcagttgactatgcaacactaggagcttcttctaagttggcagccactcttacaacatacccatttcaggttgtccgatctcgattgcagcaacgaccaagtacgactggagttccaagatacatggatagctggcatgttgtgaaggaaactgcaaggtttgagggtttacgcggcttttacagaggtatcacagcaaacgtgttgaaaaatgcccctgccgcttcaattaccttcattgtctatgagaatgtcctaaacctgctaaaattgtctaggaaagagtattagttcttttacatcctttttgcctcccatttcttgttgtagcaattaggattctacaccattgaaactatttttggaagaagtatactctcagatttgacaggagtacaaaaatagaaacaagatatcattaaagagaatgtgaacaggagacaatataatggctggtgtggtgtaattgtactatatttctcgtctttgtaatttatgagaaaagaataatctttttagactt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0025E22-LbUfe/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0025E22.1" temp_strand="+" temp_description="C02SLm0025E22.1  AC215476.1 htgs_phase:3 submitted_to_sgn_as:C02SLm0025E22 sequenced_by:kribb upload_account_name:korea">
        <position start="22924" stop="32979"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="23223" g_stop="23324" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="102" r_length="102" r_score="0.990"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="23325" i_stop="26529" i_length="3205">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="26530" g_stop="26808" g_length="279"/>
          <reference_exon_boundary r_type="cDNA" r_start="103" r_stop="381" r_length="279" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="26809" i_stop="26894" i_length="86">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="26895" g_stop="26971" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="382" r_stop="458" r_length="77" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="26972" i_stop="27911" i_length="940">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.964" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="27912" g_stop="27988" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="459" r_stop="535" r_length="77" r_score="0.974"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="27989" i_stop="29050" i_length="1062">
            <donor d_prob="0.416" d_score="0.96"/>
            <acceptor a_prob="0.957" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="29051" g_stop="29141" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="536" r_stop="626" r_length="91" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="29142" i_stop="29705" i_length="564">
            <donor d_prob="0.880" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="29706" g_stop="29796" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="627" r_stop="717" r_length="91" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="29797" i_stop="30088" i_length="292">
            <donor d_prob="0.881" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="30089" g_stop="30162" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="718" r_stop="791" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="30163" i_stop="30366" i_length="204">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.926" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="30367" g_stop="30477" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="792" r_stop="902" r_length="111" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="30478" i_stop="31383" i_length="906">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.959" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="31384" g_stop="31455" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="903" r_stop="974" r_length="72" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="31456" i_stop="31630" i_length="175">
            <donor d_prob="0.976" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="31631" g_stop="31651" g_length="21"/>
          <reference_exon_boundary r_type="cDNA" r_start="975" r_stop="995" r_length="21" r_score="1.000"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="31652" i_stop="31773" i_length="122">
            <donor d_prob="0.906" d_score="0.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="31774" g_stop="31841" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="996" r_stop="1063" r_length="68" r_score="1.000"/>
        </exon>
        <intron i_serial="11">
          <gDNA_intron_boundary i_start="31842" i_stop="32314" i_length="473">
            <donor d_prob="0.734" d_score="1.00"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="12">
          <gDNA_exon_boundary g_start="32315" g_stop="32679" g_length="365"/>
          <reference_exon_boundary r_type="cDNA" r_start="1064" r_stop="1428" r_length="365" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0025E22.1" gen_strand="+" ref_id="SGN-U570244" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>1428</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0025E22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U570244" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="23223" e_stop="23324"/>
          <exon e_start="26530" e_stop="26808"/>
          <exon e_start="26895" e_stop="26971"/>
          <exon e_start="27912" e_stop="27988"/>
          <exon e_start="29051" e_stop="29141"/>
          <exon e_start="29706" e_stop="29796"/>
          <exon e_start="30089" e_stop="30162"/>
          <exon e_start="30367" e_stop="30477"/>
          <exon e_start="31384" e_stop="31455"/>
          <exon e_start="31631" e_stop="31651"/>
          <exon e_start="31774" e_stop="31841"/>
          <exon e_start="32315" e_stop="32679"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAAAGCACACGAACAATCATCAGATAGTACAATTTGATACGCGACGACTCCCACAACTTTTATTATATATATGGAGACGCGAAAGAGACTATTCTAATAGGTCAGTCATTTTCCCACGCATATATATTTTGAATTTCTTATGTGTTTTGAAATATCAAGATGATGACCGATTACGTCTTCGTTTTCTTTTTTTAGAAAAAGAAATTATGGCTAGGGTTTCTGATTATCTCTTGAACTAGTCCTTGGAGTTCTTCTGTAGTAGTGGAATTATTTTGTATTGGAATCTTTAATGTATGAGTTAGGGTTTTTGCGGGAAGTTGGATTTATTGACTATATAGGGATTTAACTGTTCTTGTAATCTGATTGTGTTTGCTGTGCTCTGCTATTTGGGATTTCAGAAAAAAAGTAATCCCTTTATTCTAAAAATAGAATGTTAATGTGGGACTCCAACATGCATACTGAAAAAAAAATATATGTCAAGAATCAAGATTGAGTGCACAGACCAATAACCTTTGTTATTAGATGAATAGATGATATCTATAGCCACCGAGGATTTCAGTTGAATCCAATAGTTTGGTCAAAACTATGTATTTATTTCAAGAAATTTATTGAATTTGTGTAAATTATTCATTTAGTCCAAATATAAGAATCCCAAATCTATAAGCTTCAAATCCGGACTCTTCTTGACACCTTTTCTAAGTATACTCATTTCTCTACAGACCAGAGGTTATACAATTATACGGGCAACTACGACAGGAATATCAATGTTAACAAAGAACAGTATCCTTTCTATTGTGAACCAACTGAAAATATGTTCAAGTAGAAAGCAGCTGGAATCCCTTTACTCTTTGATGCTAAAGAATGGTGCAACCAAAGACTGTTTCTTGATGAACCAGTTCATCGCTACATGTTCTGCACTTAATAACCCAGATTTTGCATCCTTTGCATTTTCCCAGATGGAAAATCCCAATGTGTTCGTTTACAACGCATTAATAAGAGCTTTTGTTCATTGTCACATCCCGCATAAAGCATTACTGTTGTATATAGACATGTTAAGAACTCAAAATATTCCAAGTAGCTATACATTTTCATCGGTAGTTAAGGGTTGTACATTGATGTGTGGTCTAAGATTAGGGGAATGTATACATGGGAAGATTTGGGAATATGGGTTTGGATCCCATGTTTTTGTTCAAACTAGTCTGATTGATTTTTACTCTAATTTGGCTAGAGTTGATTTAGCGAGATTAGTGTTTGATGAAATGCCTGAAAGAGATAATTTTGCTTGGGCTGCAATGGTTTCAGCCCATGCCGGCACTGGCGATTTGGGTTCCGCTAGAAAATTGTTTGATGAGATGCCTGAAAAGATTACTGTTGCTTGTAATGCTATGATCAATGGGTATGCGAAAACAGGGGATGTCGAGTCGGCTGAGCTCTTGTTTAAGGAAATGTCAAGGAAGGATTTGATTGCATGGACGACGATGATTAACTGCTACTCTCAAAACAGGAAGTATGGTCAGGCTATAGAGGTTTTTTATGAAATGAAGAGTAACTTGATCACTCCTGATGAAGTAACAATGACAACTGTTATTTCTGCTTGTGCACATCTCGGCGTCCTGGATCAAGGAAAGGAGATGCATCTTTATGTTATGCAAAAAGGTTTTGATCTTGGTGTGCATATCGGGTCTGCATTAATTGACATGTATGCAAAATGTGGGAGTTTGGAGAGATCACTCTTGGTATTCTATAAATTGAGAGAGAAAAATCTTTTCTGTTGGAATTCTGCTATCGATGGATTGGCTGTTCATGGTTATGCAGAAGAAGCGTTAGCTCTTTTTAGCAGGATGGAGAAAGAAAAGGTAAAGCCAAATGGTATTACTTTCGTCAGCGTTCTTACAGCTTGTACTCATGCAGGGCTTGTTGAGAAGGGTCGAAAGAATTTTCTAAGTATGACTCAAGATTATGGCATTGTTCCTGAAATGGAGCACTTCGGGTGCATGGTTTATCTATTGTGTAAAGCTGGTTTGCTAGAGGAAGCACTCGAGGTTATAAGAAGCATGAGAGTGGAGCCAAATGCTGTTATTTGGGGTGCTTTACTTGGTGGTTGCAAGCTTCAGAAGAACTTGGAAATTGCTCAAGTTGCAGTCAAAAAGTTGAGCGTTTTGGAGCCAAACAACAGTGGCTATTACACCCTCCTAGTGAACATGTACGCTAATGCAAATAGATGGAGTGAAGTTGCCCGGATCAGGGCATTCTTGAGAGAGCTAGGAGTAGGAAAAGAACAACCGGGTTCCAGTTGGATTGAATTAAAGAAAAAGATCCATCAGTTTGCAGCGTGTGATAATTATCACCATTCTTCACAGGAGATCTATTCCTTACTAGATGGATTAGATGGGCAACTTAAGCTGGCTGGTCAAGTTCAGGAGCGTGAATTTGTTCTCTAATGACAGGACAAAGGCATCGTTGACATTATAGGCTTCATTGTCAAATTGTCTAAGTATTTTGTATTCTGTTCAGTGGATTCAAACCTGGACTGTACATTCGAAGTGGCAAAAAAAAAGCTAATTTGTTGTGAGTCACTATGCTTAGCTATGAAAATCATGCAGTTCGTTGAGTACTTGATAGTGTACAGTTTTTATCTTAAACGAGTAAATGTAATTCAACTGATTATAGCAGATTGATTACAGTTTTTATCAGTTTATAAATAGGCATGCATTATTATAGAGGTTTCGTGTAATTATGGACACGGCTCCCCTCCATTAGACTTTGAGACCAGTTTGTCCAGTGCAATAATCTTATTAAACCAGTACACTATTGTTCTAAGGGTCAAGGTCTGCTTAAAAAATTAGAAAAACACCTAATATACCGTGGTTAAACTAATAGTACAGTATTTATGATAGAAACATCAGAAAGTATTGCTGTGGGATTTCTATTAAATGACTTTTTCACTGATGTGTTATATTCTAAATAAGAACACTTAAAAGGGAATGGAGAGAGAGTAGTGTTTATTGTCGATAATAACATGGATGTGGATTTCTCTCATTAGGAGTATTTGTTCCATTCCATACAAATATGGGAGTAGAAGATGTTGGACACCAGAGTCATAAAAAAATTTAAAAAAATAAAAAATCAATGTGTGAATAATTTTCCTGATATATTTAAATGTCTGTTTATGATTTTTTTTTTCTTTTAAATACAACATGTATATTGTACTAACTGATGGTGTTTAATGTAATTTACTCTAATAATAATGCAAGTAGTAATTGACACTTCTTGATTGTTCCAAAAATTCCACAATAACTAATCAGGCGCAAGCTGTTGACATGTTGGACGTCACCAGTAGGTCAATACAACACCCTTTCGTCTGCGCAGGAAGGCCCGCCTCATTTCTTTTTGCATAGACGGCAAAAAGAAAAGCGTTGGGAACAAGGGGGAAAGGAAGCCAACGGTTGATAGAGCCATGAAAAAGATGGCAGCTTTGCCATCGGCAGACTGGGAATGGGAAAATGCCACCGCCGGTGCTGCTGCAGGCCTTGCCACTGTCACATTCTCTCATCCCCTTGATGTTGTTCGCACCCGGTTCCAGGGTAAGTGTTGTGCTTTCCTGCTATAGCAAATAAATGATCTCCTGTTGTTTCTTTGGAGTTTGATTTGTTGTATATGTTAATCATAGTTTACGATGGAAGAATCTCCAATGTCCCGGCCTATCGGAACACTCCTCACGCTTTGTTTGCCATTGCTCGAAGTGAGGTTTGTTTTTTCTGAATCTTTTCAATTTCTTTAAATATTGAAGCTATCTACATATGCATTGCTACTATTCCAAAACTCACTTTTTAATTCATGATACGAAAAAGAAGTTGATTTTTCAATTCATATAGTTGGTAGTTCTGGTGAGCGACAAATCATATAATGTGTTAAGGATGCTTGTTTCACAAATTTTTGGTTTCTCAAATAGGTAATATCAACTTCAGGAAAAATGTATATGCAACACTGTTTAAACAAATATGTTCTATCCTTGATTAGGAAACGACACATGGTTTAATGTTGAGTGTATGCCCTTACTTAGATGTATCATGTATCTAAATGGATGTTTTCAGTAAGTATCCTTTTACGAAGAAATGGACCATGTTCGTCTTGGTGCTAGTACAATGATAAATGTGGAGTTTTGCGGTTGTTATCATATTCTCTACGTTATGGTATTCAATCCACAGTAAGTCGGTTTATCCATTCACTCTCTCAAGAATCTTTTTGGAACCTTTGAGAGGAACTGTATCCTAGTAGAGTTTGTATATGGCGGCTACAACTGGAAAACTAGGTCCTTTGTTTTCTTATAAATATGGTTTAAGTCCTTAATTTGAATGTCAACAGTTGAGTGAACTGTCTTCTTGGACACGTTGATTTACTTCAAATCTTGATTGAGTGCTTTCTTGTTTCATTTACCTGTTCTCACAGGTAGAGTTTTATTCAGTCAGCCTCATGACATAATCATAGTGAGAAAATCCATCATATTTTGTCAATTACAATCAAACATACCACTGACATATGGTTTTCATGATGAAACTCCTTTACTTGCTGCCCCTTATTGAGTTTTTATGCTGCAGACTGTTGAATATTTGCCTTATTGCTCATATATGTTCTCATGTTTCCACCAAGATGACTTATTTATTTAGCTATAATGTTGTCTTATCAGGGTCTTAGAGGACTTTATGCTGGCTTTTACCCTGCTGTTCTTGGGTCAACTATTTCATGGGGTTTATATTTTTTCTTGTAAGTAACATCTTTTTCTTTTGTTGACAAAGCTCTAGTAAGTAGCATCTTTTGTCATTTAGCTTACCGAGAACATGACCTTAGATAGGGGGATATAGAGGGTCGTGGATTAGGGTGACGATTAGTTAGTAGTTGAGTATTGTCTCACTTTCCGGTGGATAAACTTGGTGGTAATTTGGAGCACCGTATCCACGTCTCCTTTCATATCAGTAGTATGAGTATTATTCTCGTTGCTTTTGTTCGTCGATTTTTGTTATCATTTGTTGATTTTGGTTCTGGTTTATTATTTAGCTGTGGTTACTGTTCCTTTAAGTCAGAATGCTATGTAATGCTTTCCTATTATTTGCCACAGCTTCTTCACTTTCGTATTTTATGTGTTCATAACTGCTTTGGGATGCTTTCCCTTTCTATATTTTCTTTTCTTTTTCGTTCTTTATCTTTTCTTTATTTGAGCCAGGGGGTCGAATGAAAACAATCTCTCTACCTTCACAAGGTAGGGGTAAGGTTTGCACACACACTATCCTCTCCAGACCCCACTTGTGAGATTACACTAGTATTATCTGAGGAGCGCTTAAGCCCTGAAGCAAGGCTCAAAATGTGTTGAGCACTTCGCTGGGCTTAATGTGTGCTTCAACGTCATCATTAGGGTTCTAAGCATGCTTTCTCTTGCCAATGAGCCTCTTCTGAAGAGGCTATATTTAACAATTGATACCGTAATTTTTTCAATTTCTTTGTTCATATATTTGTCATTCATGCTTATAATTATTAGTCTTGGACTAAACATTTATTTTTGCATTTTTTGTCCATTTGCACCTTTTCTCATTAAAGACCACACTTTGTTTGCGCTTAAAGCCCCAACAGACCTTAGAGCTTTTTGTTTTTTATAGCACAGACATACATTGGGTTTGTTGTTGTTTTTGGGATTGTTTGTAAGAAACAATGTCGCCCTGTAAGAAGCAACCAACATATTAGGTTGCTTTCACTTTGATGCTTCTTACATTTCTAGCTTGAGAGACATCTTTCTCTAACTGTAACATCTTTTTTGGAATTTCCTTTGCGTAGTTATAGCAAGGCTAAGCAAAGGTATCTAAGAAACAGGGAGGAGCTGAGTCCTGGCCTTCACCTTGCTTCAGCTGCAGAAGCAGGAGCGCTGGTCAGTAATCAAATTTCTGATGCTTTAATGAAAGAACAATGTACTTCACATGTTCAAATGTTCAGCACTAATTGACCAGTTTTTGGCAGGAGTGTAAAATGTAGATAGTTGAATGTGATTCTTTATTTGTTGTTGTAGTCCTTGTAGGAGTGCAATTGTAGTTGGCTTGCTGGTGACGAATCCCTTACTTTTACTGTTGATAAAACTTAAAATTGTGACCAAAGTGAAATCTCTTTTTTCAGTGGAAGGCAAGGTCGAGTAATAAACTTGCTGTTTTGGATTCCAACATAAAAAGGAAGTTACTGATTCCCATCATTGGCAAACCACCCATTAGGTGTTAGTTAAATATAGGAACTGGAGAACCTTGTAGACAAACGAATTTGATTGTGTTGATCTTTTTGTGACAACCTTTTCCCCCCTTTATCAGTTCTGATGACAACAGATTGATGACTTATTATTCAGGTGGACAAAATATGTGGCTTGCTTATTTCAGTAACTTTAAGCACATCCTGTAATGTTGCAGATTATGTCATATCTTAAAAGGTGTTTTTTGTTGGAATTCAGGTCTGTCTTTGCACCAACCCCATTTGGCTTGTGAAAACAAGATTGCAACTTCAGACTCCTAATCAGATTCGTCCATACACCGGATTTCATGGTCTGCTTCACCCTCGTAGTAACTTGTCAACATCTTTTTCATTGTGCTTTCATCTAACTTTGAGCACTCTAGGACTACTTCTTTCCATCTTAATTTCATATAAGAATTGTACCTTTATTTCTGCAATTTTGTGGTTCTATAGTTGTGTGTCCTCTTTTTGTTTACTGAGGTTCTATTGCAACTTCTGCTCTCTTCTGTATGTGCATGCACATTCAGTTTTCTGACTAGCTTCTTTTGTATTTACTTTTCTACATATTAACTTCATAGGAACTTTTTTGTATATGGATATCAGATGCTTTAAGAACGATAATCAAAGAAGAAGGATGGAGGGCACTGTACAAGGGGCTTATGCCAAGCCTATTTCTGGTTAGAATTGCATTCTCTTCCATTCTTCCCCATTATCTCATCCTGTAAATGAATTTGATCTTATCATGACATAATCTTTTCTAAGTTACCCATCATAGCATACCTAACTTTTTGGATCGATTATCTGTACAATACACAACAAATTGAATGCTTAAGTGTCACCATTCATTCATGAAACACGCTGGTCTGTTGTTGCTTAAGCAGATTACACATGGTGCTATTCAGTTCACGGCATATGAGGAATTCCGCAAAGTCATTCTTAGCTCGAAAGCTCAGGAGAATGAAAACCCTCTTGCCACAGCTGCTGACTTGTTGGTGAGGCTCTAAACCAATGTGTATTGCTTTCTTTGTATGCAATCAACTCCATAGATGTTTTAATCTTCGGATGACCAGCAAATTGATCCCATTGTGTATTATTAGATATTGGAATTCAGATGTGCCTAGATGAATAAGAATGAGTTCAGGTTGGACAGGAATTTTTTTAAGTTAGTGGGCAAATGGCACAGATGAGAATATGCAGTCCAACTCTTAGTATTATGCGCTTTCATTCCTCATTGTTTCGTCGTGTTACTTGTGCAGAAACATTAAGTAGGTGTCCTAGGAAATCTTGGAGGCAGAAACTTTTCAAGCCTTTTCTCGTTGAGCAACTAAGATATTATTCATATATCATGTCTACAATTATCCTAAGGCACATAAGGTTTCTTTTTCAGTCCCTTAACAACTGTATCTACCTTATTTACTGCATCAGAGTGGCACTAGACTATCCAACTCCTTCCCTCCCCATTAAAAGATAAATATAATTAGGAAAAAGGAAAAGAGAAAAAACTACTTGAGTAAAAGTAAAAGGGGATATTTTTCTTTAGATAAGCAGATCCGAGTGAAGAATGATTCAATTATTTTCCAAACTAACTATAAGGTTCTTGGTGTTTTTTTATGTGGTGAGAGGTGATTTATTATGAACCACTGTATTTTTTTAATTTTTTTTTTCTTAAAAGCAAGCAGATTTCATTATTGCTCTCGATGTAAATGGAAAAGAATTGGTTGTACCATGTCTAGAGGTTGATCATTACTCAAGAACACTATCAGATATGAATGATATAGTGGTCACTGTTATGATTAGTTTTCTTCATATGAATACTTTGTTGTAGAAAGTTGACCACTTCAGTTCCCAATAAGAGGGAACATTACACCTCAGTATTTGCTCTTACATTTCTTTCACAGGATTCAGTTGACTATGCAACACTAGGAGCTTCTTCTAAGTTGGCAGCCACTCTTACAACATACCCATTTCAGGTATGTTAGGGGTGTGGTAAGTTTGTTCTTATTCTATTATTGGGAATAAGGATTCGGGGAAATTTGAGCATTATGCAGCACTCATCTCCATGTGCCAATTTGTTCTAACAATCTTACGCCGTGCTCCCTCGCTTTTCTCATTAACTAATTATGTATTTATATGAAACCTTTTCAGGTTGTCCGATCTCGATTGCAGGTAACTGCCTTTCGTGTTACCACTTTACGTGACACTTGATACAACTCTTCTCAGTAGACAAGCATCTAGTGGTGATTTTAATTTTCTGTAACGTAGTAAATGGTCTATCTTCTCTCTAACAGCAACGACCAAGTACGACTGGAGTTCCAAGATACATGGATAGCTGGCATGTTGTGAAGGAAACTGCAAGGTCAGGATGTGTTTCAGCCTTATTTACAGCCTATGCACTTGATTAAATATACATGAACGCCATACACTAAGTTGCTCTATATTGAAATGTTTTCTGAATCTAATTGCAAGTTCATCGATTGCAACGGTTGCTGAAGAAATTCAATATCAGGAATCAAACTAAGAACAAACAAAAGCTGAAGAAATTCAAAATTCTTCTTTAAGATCATTAAGTTTTTTGAAAAAGATTTCCAGTCGATTATTGAACTCTTTAAAAGCAGACTTCAATTCAAAAGGATACGCAGGGGAAGCAAATTGTATGTTTCAAATTTTCCAAGTCTTCTCTCGATCCTAAATTTCTTCTATCCTGCCTCCGTCCATCATCTAATACATTACATAGAAGTCATAAAAATCGTAGTAGAACCCCCTTATTGGTAAAACTACCCCTTAATTTCATCGTCTAAACTCGGTTTTTTTTTCTTGTTGAGCTTACAGGTTTGAGGGTTTACGCGGCTTTTACAGAGGTATCACAGCAAACGTGTTGAAAAATGCCCCTGCCGCTTCAATTACCTTCATTGTCTATGAGAATGTCCTAAACCTGCTAAAATTGTCTAGGAAAGAGTATTAGTTCTTTTACATCCTTTTTGCCTCCCATTTCTTGTTGTAGCAATTAGGATTCTACACCATTGAAACTATTTTTGGAAGAAGTATACTCTCAGATTTGACAGGAGTACAAAAATAGAAACAAGATATCATTAAAGAGAATGTGAACAGGAGACAATATAATGGCTGGTGTGGTGTAATTGTACTATATTTCTCGTCTTTGTAATTTATGAGAAAAGAATAATCTTTTTAGACTT</genome_strand>
        <mrna_strand>GGAAAAGCACACGAACAATCATCAGATAGTACAATTTGATACGCGACGACTCCCACAACTTTTATTATATATATGGAGACGCGAAAGAGACTATTCTAATAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGCAAGCTGTTGACATGTTGGACGTCACCAGTAGGTCAATACAACACCCTTTCGTCTGCGCAGGAAGGCCCGCCTCATTTCTTTTTGCATAGACGGCAAAAAGAAAAGCGTTGGGAACAAGGGGGAAAGGAAGCCAACGGTTGATAGAGCCATGAAAAAGATGGCAGCTTTGCCATCGGCAGACTGGGAATGGGAAAATGCCACCGCCGGTGCTGCTGCAGGCCTTGCCACTGTCACATTCTCTCATCCCCTTGATGTTGTTCGCACCCGGTTCCAGG......................................................................................TTTACGATGGAAGAATCTCCAATGTCCCGGCCTATCGGAACACTCCTCACGCTTTGTTTGCCATTGCTCGAAGTGAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTCTTAGAGGACTTTATGCTGGCTTTTACCCTGCTGTTCTCAGGTCAACTATTTCATGGGGTTTATATTTTTTCTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATAGCAAGGCTAAGCAAAGGTATCTAAGAAACAGGGAGGAGCTGAGTCCTGGCCTTCACCTTGCTTCAGCTGCAGAAGCAGGAGCGCTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTGTCTTTGCACCAACCCCATTTGGCTTGTGAAAACAAGATTGCAACTTCAGACTCCTAATCAGATTCGTCCATACACCGGATTTCATG....................................................................................................................................................................................................................................................................................................ATGCTTTAAGAACGATAATCAAAGAAGAAGGATGGAGGGCACTGTACAAGGGGCTTATGCCAAGCCTATTTCTG............................................................................................................................................................................................................ATTACACATGGTGCTATTCAGTTCACGGCATATGAGGAATTCCGCAAAGTCATTCTTAGCTCGAAAGCTCAGGAGAATGAAAACCCTCTTGCCACAGCTGCTGACTTGTTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTCAGTTGACTATGCAACACTAGGAGCTTCTTCTAAGTTGGCAGCCACTCTTACAACATACCCATTTCAG...............................................................................................................................................................................GTTGTCCGATCTCGATTGCAG..........................................................................................................................CAACGACCAAGTACGACTGGAGTTCCAAGATACATGGATAGCTGGCATGTTGTGAAGGAAACTGCAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTGAGGGTTTACGCGGCTTTTACAGAGGTATCACAGCAAACGTGTTGAAAAATGCCCCTGCCGCTTCAATTACCTTCATTGTCTATGAGAATGTCCTAAACCTGCTAAAATTGTCTAGGAAAGAGTATTAGTTCTTTTACATCCTTTTTGCCTCCCATTTCTTGTTGTAGCAATTAGGATTCTACACCATTGAAACTATTTTTGGAAGAAGTATACTCTCAGATTTGACAGGAGTACAAAAATAGAAACAAGATATCATTAAAGAGAATGTGAACAGGAGACAATATAATGGCTGGTGTGGTGTAATTGTACTATATTTCTCGTCTTTGTAATTTATGAGAAAAGAATAATCTTTTTAGACTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0025E22-LbUfe/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U573581" ref_strand="+" ref_description="SGN-U573581 Tomato 200607#2 [18 ESTs aligned] (*GB) gi|157354947|emb|CAO48293.1| (e_value=2e-24) unnamed; (*ATH) AT1G70190.1 (e_value=8e-19) | Symbol: None | ribosomal protein L12 family protein, contains similarity to ribosomal protein GI:7270590 from (Arabidopsis thaliana) | chr1:26434206-26435240 FORWARD | Aliases: F20P5.9, F20P5_9; ">
      <seq>attgtttttaagtcatggatagcaattccataacctaaggggccaaagtgtatgctagtaggcctaaaacctcacttccccaaccttggtacttctcccagacggcttaaacccgccgccgtaatcactatctccggcgccgttacaaagtccaagcagaagttcttatgctataagattctgtaatcatgaggtgctttaatcgatttatcaatcaattgctgtctcgccgttcaagaactatttccacatatcaaacaccttatgtgcattcacgaattccacagtccaagattcaaaatttatccaaaacccatttctacagcttcactaaatcgttaattagttcaaatttcacaacatcagctcaggagtctaagccggccccatccgagagagtatctgcgatagtcgatgcgatttcgggtctaacgttgctggaagtatcggatttgggggaggttctaaggaagaaaatgggtattgaagagatgcctgtaatggcaatgatgatgcctggaatgggatttagtgctggagggatgaagggaaagggtgcaggagctgcgggaaagacggaggagaaggcggagaagactgtgtttgatctgaagcttgaagggggatttgatgccggggcaaagattaagattatcaaggaagtgagatcttttactgatctgggactcaaggaggctaaggatttggtggaaaaggctccagctagtttgaagaaaggggttacgaaagaggaggctgagaaaattattgagaagatgaaagcggttggagccaaagtcactatggagtgagatcccttgattgtatttttgcaacaaagatcgggagctaacaggtcatgactttgaaaacacaatctgcatttggtgatgcatcatgtttggaggttcgtggttactcaagggctagcttttctgttttgaaaataaaggagacggtgactctcctaggacattgtagagctatttggttgagaactgacatcttataatgaattcacgttgttataggtatgatagatagtgagctgaaaaaaactgtggtatatttgcaaccatggattagtttccaattcagtttagatcagtttgtactctttttaattatttaggctacagttggtttgagattatcctgacaaggttgacacacatagtgaacaaagctggacttgtccggttctaattcacatttcaagct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0025E22-LbUfe/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0025E22.1" temp_strand="+" temp_description="C02SLm0025E22.1  AC215476.1 htgs_phase:3 submitted_to_sgn_as:C02SLm0025E22 sequenced_by:kribb upload_account_name:korea">
        <position start="33585" stop="37028"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33885" g_stop="34697" g_length="813"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="813" r_length="813" r_score="0.999"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="34698" i_stop="36320" i_length="1623">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="36321" g_stop="36728" g_length="408"/>
          <reference_exon_boundary r_type="cDNA" r_start="814" r_stop="1221" r_length="408" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0025E22.1" gen_strand="+" ref_id="SGN-U573581" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>1221</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0025E22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U573581" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33885" e_stop="34697"/>
          <exon e_start="36321" e_stop="36728"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTGTTTTTAAGTCATGGATAGCAATTCCATAACCTAAGGGGCCAAAGTGTATGCTAGTAGGCCTAAAACCTCACTTCCCCAACCTTGGTACTTCTCCCAGACGGCTTAAACCCGCCGCCGTAATCACTATCTCCGGCGCCGTTACAAAGTCCAAGCAGAAGTTCTTATGCTATAAGATTCTGTAATCATGAGGTGCTTTAATCGATTTATCAATCAATTGCTGTCTCGCCGTTCAAGAACTATTTCCACATATCAAACACCTTATGTGCATTCACGAATTCCACAGTCCAAGATTCAAAATTTATCCAAAACCCATTTCTACAGCTTCACTAAATCGTTAATTAGTTCAAATTTCACAACATCAGCTCAGGAGTCTAAGCCGGCCCCATCCGAGAGAGTATCTGCGATAGTCGATGAGATTTCGGGTCTAACGTTGCTGGAAGTATCGGATTTGGGGGAGGTTCTAAGGAAGAAAATGGGTATTGAAGAGATGCCTGTAATGGCAATGATGATGCCTGGAATGGGATTTAGTGCTGGAGGGATGAAGGGAAAGGGTGCAGGAGCTGCGGGAAAGACGGAGGAGAAGGCGGAGAAGACTGTGTTTGATCTGAAGCTTGAAGGGGGATTTGATGCCGGGGCAAAGATTAAGATTATCAAGGAAGTGAGATCTTTTACTGATCTGGGACTCAAGGAGGCTAAGGATTTGGTGGAAAAGGCTCCAGCTAGTTTGAAGAAAGGGGTTACGAAAGAGGAGGCTGAGAAAATTATTGAGAAGATGAAAGCGGTTGGAGCCAAAGTCACTATGGAGTGAGGTAATTGTTCATGCCATTTTAATCAAAATCCTGCTAATGAATTTGAATCATGGGATGTAGTTCTTGTAATAGGGAATGCGCCAAGGTGGATAGATGTACTGTGCCAGTAGTTAAGTTTTTTTGTCTCCACAAATATGTGGATAATTGTTATGCATTCTGAAGCAAGACAGATCTTGGTTTCTAATTTAGTTGTGTTGTCTTGCAGTACACACATAATTGTTATATATGCCAGTCTCATATGCAACATGTCAATTGATGAACTTTCTTGGATAACAATTTTGAAGCATGTCCTTCAACATCTTAATATCATCCCTCACAAAAATATAGTTAGCGCACTACGTGGTTTGCTTGTGTTTTCAGTATTCTAATGTATCTTATGAATTAGTTTAAAATTCTAGTATAAGGTACAATTGTACAAACCTCTGTGAAAGCATAAGTTGGAAATGCTGAATCTTTCTTGTACAGTATGATACTAGGTTTAGGTGCAAATGAATTGTTTTAGGGTGAGGGAAGATTTTTTAGCACTTTAGGCATCAGTGTGGATCTTCCGTGGCATGATATGCTGCCTGATCGAAGATTAGTGGATTTGCTATGATCTACATTTTAATGTCTCTCAAAGTTTAAAAGGCTGGTTACAGAGTTTGAGTTGTTTGAAGTTTGTTGAAAAAATAAGGGGCCCAGTGCACTAAGCTTTCACTATGGATAGTCCGGTGGTGGATCGGAACAGATTGGGTTGATTGTATGCAGCTTTACCTACTAGCACTTCTGCAAATGGCTCTTTTCACCACTTGTACCAATAGACCTCCTGGTCACATGACGGCAACTCTTAATGTTGCACCAAGGCTATCCTTCACTTTGAAGCTCTGTTGATACATATATTTCCTGCATGTTCCTTCGGCCCATCTTGAAGAATATGAAAAGCTTCTTCATTACATACGGATTCTCTGATAAATTGTAGGGTAAAATAGTTGGAAGGGGATTTGACATGTTGTGAATATGGTTTTCAGTAAAGCTATGTACACAAACTTTACCATCACAAAAAGAAAAAAAATTATTAAAGGGGACTGGCAGATTAAAAATGAATGTGAAAATGTTCTCAGTTTGCCAAGTGGGAAAATTTAAGTGACTATTGACTTCACTGTGCATTTTCCCTTGTTTGATCTTCTATAACCAAAAAAAGTAGTATACTTCCGTTTGATTAGTTGTACCCAGCATGTAGCTGATCTTTACTAGTATAAACTTATGTCTATCTAATTTGATTTGGTCAACAATAGTGATATCTTTTCTTTAGTAGAGCGCTATGGAAGGTTTTCATAACAAATTATCTTGTAATTAGTAATTTATGTAGCTGCTTGTTGTGAATAAGATCAACTAACCTGCAAACTGTAGGTACTTAATACTATGATATGTAGTCCCTTGGAGATTTAACCTTCATCTATCTCAAACTGTATGAGATGGAATCGTGTCATCTTCACCTCTCTCTATTTGAAGATGAGATGACATAATTTTGTCTTTTTTTTTTTTTTTGGGGTGAAGTAACAATTTATCTTTCTTGTTTTGGGACGGAGAAGGAAATCCCTTCTTTGTTACTAGAGCTTACCTATCTTTTTTGTGCTTGTACAGATCCCTTGATTGTATTTTTGCAACAAAGATCGGGAGCTAACAGGTCATGACTTTGAAAACACAATCTGCATTTGGTGATGCATCATGTTTGGAGGTTCGTGGTTACTCAAGGGCTAGCTTTTCTGTTTTGAAAATAAAGGAGACGGTGACTCTCCTAGGACATTGTAGAGCTATTTGGTTGAGAACTGACATCTTATAATGAATTCACGTTGTTATAGGTATGATAGATAGTGAGCTGAAAAAAACTGTGGTATATTTGCAACCATGGATTAGTTTCCAATTCAGTTTAGATCAGTTTGTACTCTTTTTAATTATTTAGGCTACAGTTGGTTTGAGATTATCCTGACAAGGTTGACACACATAGTGAACAAAGCTGGACTTGTCCGGTTCTAATTCACATTTCAAGCT</genome_strand>
        <mrna_strand>ATTGTTTTTAAGTCATGGATAGCAATTCCATAACCTAAGGGGCCAAAGTGTATGCTAGTAGGCCTAAAACCTCACTTCCCCAACCTTGGTACTTCTCCCAGACGGCTTAAACCCGCCGCCGTAATCACTATCTCCGGCGCCGTTACAAAGTCCAAGCAGAAGTTCTTATGCTATAAGATTCTGTAATCATGAGGTGCTTTAATCGATTTATCAATCAATTGCTGTCTCGCCGTTCAAGAACTATTTCCACATATCAAACACCTTATGTGCATTCACGAATTCCACAGTCCAAGATTCAAAATTTATCCAAAACCCATTTCTACAGCTTCACTAAATCGTTAATTAGTTCAAATTTCACAACATCAGCTCAGGAGTCTAAGCCGGCCCCATCCGAGAGAGTATCTGCGATAGTCGATGCGATTTCGGGTCTAACGTTGCTGGAAGTATCGGATTTGGGGGAGGTTCTAAGGAAGAAAATGGGTATTGAAGAGATGCCTGTAATGGCAATGATGATGCCTGGAATGGGATTTAGTGCTGGAGGGATGAAGGGAAAGGGTGCAGGAGCTGCGGGAAAGACGGAGGAGAAGGCGGAGAAGACTGTGTTTGATCTGAAGCTTGAAGGGGGATTTGATGCCGGGGCAAAGATTAAGATTATCAAGGAAGTGAGATCTTTTACTGATCTGGGACTCAAGGAGGCTAAGGATTTGGTGGAAAAGGCTCCAGCTAGTTTGAAGAAAGGGGTTACGAAAGAGGAGGCTGAGAAAATTATTGAGAAGATGAAAGCGGTTGGAGCCAAAGTCACTATGGAGTGAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCCTTGATTGTATTTTTGCAACAAAGATCGGGAGCTAACAGGTCATGACTTTGAAAACACAATCTGCATTTGGTGATGCATCATGTTTGGAGGTTCGTGGTTACTCAAGGGCTAGCTTTTCTGTTTTGAAAATAAAGGAGACGGTGACTCTCCTAGGACATTGTAGAGCTATTTGGTTGAGAACTGACATCTTATAATGAATTCACGTTGTTATAGGTATGATAGATAGTGAGCTGAAAAAAACTGTGGTATATTTGCAACCATGGATTAGTTTCCAATTCAGTTTAGATCAGTTTGTACTCTTTTTAATTATTTAGGCTACAGTTGGTTTGAGATTATCCTGACAAGGTTGACACACATAGTGAACAAAGCTGGACTTGTCCGGTTCTAATTCACATTTCAAGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0025E22-LbUfe/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U583440" ref_strand="+" ref_description="SGN-U583440 Tomato 200607#2 [2 ESTs aligned] ">
      <seq>gggggatcacggaacagatttaacgattatctccctccgttccaccggaaactcaaattcttcttctcttaagaaagcccaattccgatgggttctcgttcaaaattaagccccagtagcttatcgatgagaagaacaagaagatctacccctcacaaaaaaacatgcaaatctcaaaatcttgttgacgttgacggcggttccgtttctgaaaaattggaggctctgaagcagttaatcccagccaactatggtgaaatcaaagcggaccagttgttcaaagaaactgctgattacattgttcttctcagaactcaggtcttcgttttacagaaactcgtcgatttttatggatcaaataccgaccg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0025E22-LbUfe/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0025E22.1" temp_strand="-" temp_description="C02SLm0025E22.1  AC215476.1 htgs_phase:3 submitted_to_sgn_as:C02SLm0025E22 sequenced_by:kribb upload_account_name:korea">
        <position start="43617" stop="42657"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="43320" g_stop="42956" g_length="365"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="368" r_length="368" r_score="0.967"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0025E22.1" gen_strand="-" ref_id="SGN-U583440" ref_strand="+">
        <total_alignment_score>0.967</total_alignment_score>
        <cumulative_length_of_scored_exons>365</cumulative_length_of_scored_exons>
        <coverage percentage="0.992" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0025E22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U583440" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="43320" e_stop="42956"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATAGTATCACGGAACAGATTTAACGATTATCTCCCTCCGTTCCACCGGAAACTCAAATTCTTCTTCTC-TAAGAAAG--CAATTCCGATGGGTTCTCGTTCAAAATTAAGCCCCAGTAGCTTATCGATGAGAAGAACAAGAAGATCTACCCCTCACAAAAAAACATGCAAATCTCAAAATCTTGTTGACGTTGACGGCGGTTCCGTTTCTGAAAAATTGGAGGCTCTGAAGCAGTTAATCCCAGCCAACTATGGTGAAATCAAAGCGGACCAGTTGTTCAAAGAAACTGCTGATTACATTGTTCTTCTCAGAACTCAGGTCTTCGTTTTACAGAAACTCGTCGATTTTTATGGATCAAATACCGATCA</genome_strand>
        <mrna_strand>GGGGGATCACGGAACAGATTTAACGATTATCTCCCTCCGTTCCACCGGAAACTCAAATTCTTCTTCTCTTAAGAAAGCCCAATTCCGATGGGTTCTCGTTCAAAATTAAGCCCCAGTAGCTTATCGATGAGAAGAACAAGAAGATCTACCCCTCACAAAAAAACATGCAAATCTCAAAATCTTGTTGACGTTGACGGCGGTTCCGTTTCTGAAAAATTGGAGGCTCTGAAGCAGTTAATCCCAGCCAACTATGGTGAAATCAAAGCGGACCAGTTGTTCAAAGAAACTGCTGATTACATTGTTCTTCTCAGAACTCAGGTCTTCGTTTTACAGAAACTCGTCGATTTTTATGGATCAAATACCGACCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0025E22-LbUfe/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U568044" ref_strand="+" ref_description="SGN-U568044 Tomato 200607#2 [6 ESTs aligned] (*GB) gi|78191450|gb|ABB29946.1| (e_value=2e-119) F-box family protein-like [Solanum tuberosum]; (*ATH) AT5G39250.1 (e_value=8e-76) | Symbol: None | F-box family protein, ; similar to SKP1 interacting partner 2 (SKIP2) TIGR_Ath1:At5g67250 | chr5:15741758-15742984 FORWARD | Aliases: K3K3.16, K3K3_16; (*SWP) sp|Q9FL82|FB270_ARATH (e_value=7e-75) F-box protein At5g39250 OS=Arabidopsis thaliana GN=At5g39250; ">
      <seq>taatcattttctcttctgattccggcgacgattaccggggaatgtttcccgatgacggtctggtttctttaaagagataagtccatgcttccgagtaattggctaggtgaagaattatcctttctctgaagtgcagtatgattgcatcaactgcaaggcatgagagctgattgctttgatctaccaaaatctttataaagagctgaaaagctgatatattccagctggtttccttgttgtgcacaagatggcgtgtgaagaaattctgaaggctgtattcccatttctggagggcattgaactggctacatgtatgatagtgtgcaaacagtggcgagatattgcacgagatgattacttctggaaatgtctttgttctaaaaaatggccatctatttgcaaacggtcatcacctcccactgtaacatactataatctatttcagaacttccataaacgtccataccgccggactgttctccctcctaaactttccttcagtgacttagagttctacattgacatatggactgaagagaagataatattttcagatgtggtcccagggcctgttcttcagaagggaatctggatcccacctcccggaatctgtgatgtgcttaggttccacttggaagggcctgaatacaagatgactctacctgtggaaccaagatttacaattcctttgtgccagacagtcagcgtctctgtgcttgttgggcgcaaagatacaaataaagttgcatgcattatcaagaagtccctttttgattatatagatcgaacagcatatcgggctttagcttatgactatcttgacttctcctctcccatgtgcttngttgtatcgggtggtcgggcttggatatctttgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0025E22-LbUfe/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0025E22.1" temp_strand="+" temp_description="C02SLm0025E22.1  AC215476.1 htgs_phase:3 submitted_to_sgn_as:C02SLm0025E22 sequenced_by:kribb upload_account_name:korea">
        <position start="50831" stop="53446"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="51131" g_stop="51206" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="76" r_length="76" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="51207" i_stop="52343" i_length="1137">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.894" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="52344" g_stop="53146" g_length="803"/>
          <reference_exon_boundary r_type="cDNA" r_start="77" r_stop="879" r_length="803" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0025E22.1" gen_strand="+" ref_id="SGN-U568044" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>879</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0025E22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U568044" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="51131" e_stop="51206"/>
          <exon e_start="52344" e_stop="53146"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAATCATTTTCTCTTCTGATTCCGGCGACGATTACCGGGGAATGTTTCCCGATGACGGTCTGGTTTCTTTAAAGAGGTAATAATCTCATAATTTTTGCTTCTTTGTTTCAGTTGTTGATTTTTTCCGACGTTCATTTCCATTGATTGGTCATATCTGATTGCTAAATAAAAAGTTCATAGGTTTAATTTAGGGTTATATTCGAATTAAGGGTTCAGATGGAGAGGAATAGATATAGAGGATTCATATGATGGACTCACAAGTTCGAATTGTTAATGCTCTTGTTGTATTTTCTAATTTAGGTTTTTTTTTCTTCTTTCCGTTGGTTTTTTTTCCCTTTTTTAACGCAGAAAGTTACTTGTTTGTTTGTTTTCAGTCTTAAATAAAGCTGACAAAAATTATACCTTTTTGGTGGTTGGTTGGGTGGAATTAGCTTTATTTTGCTCATTTTCTGGATGCGTATGCTTTGTCCTTTTTCATGTACCGGTGTTGCTATTTTTTTTTTGGGGGGGTAATTGTTGAAATCTGTTTTAGTGATTTTCTTAAAGGGGAGGCCTTTCCTCTTCAAGTATTTGTGGGATTTTGATCAGTTCACTGAGTTTCCTCCAACACCATAACATCTCCTTGGTGTATTCATAAAGCTGACAGCTACTTGGATAAGTGATCTTTACATAACTCTTAAGTGTTCTTTTACAGGTCAATAAGCAAACTGCAAAGACTTTTGTTTGTATTGCTTATGAAGGAAATAAGAATATTGAAATTTGCCCTTGGGTAGACCGTTGCAGAAGAACGATTTGTTCTTCTCTTTGCGTCTAGTCTGTTTTATTTCCAAGCAAATCTCTATGTAGGAAGAAATATCGTTGCGAGTTTTTTGTTTTTTGTTCTATTTTCATATTTGAAGATTTATTAAGTTGGAACTTTGAACCTCATTTGTTTGAGATATTTGGTCAGAACAATATATGACCCCGGTGGTCAAGAAGTGTTTGAGATATTTTTAGTAATTAACCTCATAGGCTCTCATTTCACATATCTTTATTGCTTCCTTGTTTATCTAACATGCATACTTTTGTTTATTTTCTCTTTATTCACAATTTCATGTCATCTAAGCATGAGTTAGTCTAAATGTGTACATAGATATTTGGGTTATCTTCACAGTTACTCTTGATTTATTGCATAAGGAAACCTGTTTTCTCTAAATTGGTACTCTGCATGCAGATAAGTCCATGCTTCCGAGTAATTGGCTAGGTGAAGAATTATCCTTTCTCTGAAGTGCAGTATGATTGCATCAACTGCAAGGCATGAGAGCTGATTGCTTTGATCTACCAAAATCTTTATAAAGAGCTGAAAAGCTGATATATTCCAGCTGGTTTCCTTGTTGTGCACAAGATGGCGTGTGAAGAAATTCTGAAGGCTGTATTCCCATTTCTGGAGGGCATTGAACTGGCTACATGTATGATAGTGTGCAAACAGTGGCGAGATATTGCACGAGATGATTACTTCTGGAAATGTCTTTGTTCTAAAAAATGGCCATCTATTTGCAAACGGTCATCACCTCCCACTGTAACATACTATAATCTATTTCAGAACTTCCATAAACGTCCATACCGCCGGACTGTTCTCCCTCCTAAACTTTCCTTCAGTGACTTAGAGTTCTACATTGACATATGGACTGAAGAGAAGATAATATTTTCAGATGTGGTCCCAGGGCCTGTTCTTCAGAAGGGAATCTGGATCCCACCTCCCGGAATCTGTGATGTGCTTAGGTTCCACTTGGAAGGGCCTGAATACAAGATGACTCTACCTGTGGAACCAAGATTTACAATTCCTTTGTGCCAGACAGTCAGCGTCTCTGTGCTTGTTGGGCGCAAAGATACAAATAAAGTTGCATGCATTATCAAGAAGTCCCTTTTTGATTATATAGATCGAACAGCATATCGGGCTTTAGCTTATGACTATCTTGACTTCTCCTCTCCCATGTGCTTGTTTGTATCGGGTGTTCGGGCTTGGATATCTTTGCT</genome_strand>
        <mrna_strand>TAATCATTTTCTCTTCTGATTCCGGCGACGATTACCGGGGAATGTTTCCCGATGACGGTCTGGTTTCTTTAAAGAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAAGTCCATGCTTCCGAGTAATTGGCTAGGTGAAGAATTATCCTTTCTCTGAAGTGCAGTATGATTGCATCAACTGCAAGGCATGAGAGCTGATTGCTTTGATCTACCAAAATCTTTATAAAGAGCTGAAAAGCTGATATATTCCAGCTGGTTTCCTTGTTGTGCACAAGATGGCGTGTGAAGAAATTCTGAAGGCTGTATTCCCATTTCTGGAGGGCATTGAACTGGCTACATGTATGATAGTGTGCAAACAGTGGCGAGATATTGCACGAGATGATTACTTCTGGAAATGTCTTTGTTCTAAAAAATGGCCATCTATTTGCAAACGGTCATCACCTCCCACTGTAACATACTATAATCTATTTCAGAACTTCCATAAACGTCCATACCGCCGGACTGTTCTCCCTCCTAAACTTTCCTTCAGTGACTTAGAGTTCTACATTGACATATGGACTGAAGAGAAGATAATATTTTCAGATGTGGTCCCAGGGCCTGTTCTTCAGAAGGGAATCTGGATCCCACCTCCCGGAATCTGTGATGTGCTTAGGTTCCACTTGGAAGGGCCTGAATACAAGATGACTCTACCTGTGGAACCAAGATTTACAATTCCTTTGTGCCAGACAGTCAGCGTCTCTGTGCTTGTTGGGCGCAAAGATACAAATAAAGTTGCATGCATTATCAAGAAGTCCCTTTTTGATTATATAGATCGAACAGCATATCGGGCTTTAGCTTATGACTATCTTGACTTCTCCTCTCCCATGTGCTTNGTTGTATCGGGTGGTCGGGCTTGGATATCTTTGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0025E22-LbUfe/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U574382" ref_strand="+" ref_description="SGN-U574382 Tomato 200607#2 [13 ESTs aligned] (*GB) gi|157341245|emb|CAO49152.1| (e_value=1e-128) unnamed; (*ATH) AT4G00830.1 (e_value=3e-35)  Symbol: None | RNA recognition motif (RRM)-containing protein, similar to nucleolin protein; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM) | chr4:352051-355598 FORWARD | Aliases: A_TM018A10.14, A_TM018A10_... ; (*SWP) sp|Q7TMK9|HNRPQ_MOUSE (e_value=7e-33) Heterogeneous nuclear ribonucleoprotein Q OS=Mus musculus GN=Syncrip; ">
      <seq>gccaacttctgcatagaaaaatagtacgatgatatgcagggaaaactgaactccgaaacgacaactgatttgagggcttagggttccgaccgaatcactctcggattgagaattcattggagacttcattttttcagaacaggaaatgaaagggacagagatttttgttggtggtttggcccgtactactactgaaagcaaaattcacgaggtattttcttcatgcggtgagattgtggaaataaggttgataaaagaccagataggcaatgccaaggggttctgctttgtacgatttgcaacaaaatatgctgctgacaaagctctgaaggaaaaatctggatatgtgctagatgggaagaaaattgggattcgcccctcagttgagcaggacacactatttcttggaaatcttaacaaaggttggggtgctgaggaatttgagagtattgtgcgccaggtttttccagatgttacatctgttgatcttgcaattcttggagatgtccaacttggtcagaagcaacggaatcggggatttgcctttgtgaaattttcatctcatgctgctgcagctcgtgctttacgggtaggctcccaatctgattttctcatcggtggcaacttgcatccatctgtacagtgggctgaggaggaatctgaagttgatcctaatgaacttgctcagatcaaagtagcctttgtcagaaatgtacctcctggtgctgatgaagattacttgaagaagctctttcagccctttggcaatgtagagaaggttactctctccaggaagggtagttccaccattggatttgtttacttcgataagcgatctgatcttgacaatgctattaaaggattgaatgagaaaactgtacaagggccaaggggaggtccctcaagcaagattcaggtcgaagttgcgaggccaactgataagaacaggaaacgaggtcgtgaggatcaaaaaatgtccagtaacattgagagtcattccaagcttttgaaggatgatccaaatgttgagatggttgggggtcctaaatcaaaagctcaaccggtgatgcatctatcagatgaaatggattatttggatccttatgaagctgctgtaattgcactacctgtgcttgtcaaggagcgtttagttcggatcttgcggcttggtattgctactagatatgatatagatgttgtcaacctaaccagtcttaagatgttgcccgaatcagctgccatatctgttcttgaccagctcatgtggtctgaagctgatatgcagaacaagggaggatttttagcttcattaatttctaaagtatgttctgcagagtgcagataagcatcgaaagtgttatctttgttagtactataatattttgcgcgctttatttaacaaagtcttctctggaaatagcagcaggttgaaaagctgggattgaaacagtttgatagcaagtcaagggtagaagatgttgccttgagggtaccagaaccagacagcttctctacaagagttcgtttgccacatctagattcatatgcctcccgagtacccttgcccatggctagggctgatgtttacacatctcgctattcagcgtatttagatccctatcaatctggtcgggtgacaacagagaggatggaggaagcaagttcccatttgcaggggacttcacttacgtatggtcaggtgacaacgaggatggaggaagcaggttctattcacaagaaaaggatggaggaagcaaatcccactttgcagtcgttcctctctggcggggtgactaanaggaggatggaggaaccaagtcctttgcaggcaacatcccttccatctggtcgagtatncaggatggatgaagcaggtcccacttttcaggcatcttggagtccttcagctgctgctgacagagttggacttcattcacgcattaccccaacttctgatcatcaacagactcgaccacggatcaggtttgatcccttcactggtgagccca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0025E22-LbUfe/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0025E22.1" temp_strand="-" temp_description="C02SLm0025E22.1  AC215476.1 htgs_phase:3 submitted_to_sgn_as:C02SLm0025E22 sequenced_by:kribb upload_account_name:korea">
        <position start="67891" stop="53952"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="67592" g_stop="67456" g_length="137"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="137" r_length="137" r_score="0.993"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="67455" i_stop="67090" i_length="366">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.937" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="67089" g_stop="67016" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="138" r_stop="211" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="67015" i_stop="65511" i_length="1505">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="65510" g_stop="65445" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="212" r_stop="277" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="65444" i_stop="65304" i_length="141">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.966" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="65303" g_stop="65232" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="278" r_stop="349" r_length="72" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="65231" i_stop="63880" i_length="1352">
            <donor d_prob="0.979" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="63879" g_stop="63807" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="350" r_stop="422" r_length="73" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="63806" i_stop="63378" i_length="429">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="63377" g_stop="63340" g_length="38"/>
          <reference_exon_boundary r_type="cDNA" r_start="423" r_stop="460" r_length="38" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="63339" i_stop="63258" i_length="82">
            <donor d_prob="0.998" d_score="0.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="63257" g_stop="63150" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="461" r_stop="568" r_length="108" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="63149" i_stop="60507" i_length="2643">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.809" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="60506" g_stop="60387" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="569" r_stop="688" r_length="120" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="60386" i_stop="60295" i_length="92">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="60294" g_stop="60214" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="689" r_stop="769" r_length="81" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="60213" i_stop="60098" i_length="116">
            <donor d_prob="0.976" d_score="1.00"/>
            <acceptor a_prob="0.525" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="60097" g_stop="60029" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="770" r_stop="838" r_length="69" r_score="1.000"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="60028" i_stop="57986" i_length="2043">
            <donor d_prob="0.895" d_score="1.00"/>
            <acceptor a_prob="0.573" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="57985" g_stop="57908" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="839" r_stop="916" r_length="78" r_score="1.000"/>
        </exon>
        <intron i_serial="11">
          <gDNA_intron_boundary i_start="57907" i_stop="57805" i_length="103">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="12">
          <gDNA_exon_boundary g_start="57804" g_stop="57640" g_length="165"/>
          <reference_exon_boundary r_type="cDNA" r_start="917" r_stop="1081" r_length="165" r_score="1.000"/>
        </exon>
        <intron i_serial="12">
          <gDNA_intron_boundary i_start="57639" i_stop="56655" i_length="985">
            <donor d_prob="0.974" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="13">
          <gDNA_exon_boundary g_start="56654" g_stop="56547" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="1082" r_stop="1189" r_length="108" r_score="1.000"/>
        </exon>
        <intron i_serial="13">
          <gDNA_intron_boundary i_start="56546" i_stop="55371" i_length="1176">
            <donor d_prob="0.944" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="14">
          <gDNA_exon_boundary g_start="55370" g_stop="55302" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="1190" r_stop="1258" r_length="69" r_score="0.986"/>
        </exon>
        <intron i_serial="14">
          <gDNA_intron_boundary i_start="55301" i_stop="55194" i_length="108">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.957" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="15">
          <gDNA_exon_boundary g_start="55193" g_stop="54877" g_length="317"/>
          <reference_exon_boundary r_type="cDNA" r_start="1259" r_stop="1575" r_length="317" r_score="1.000"/>
        </exon>
        <intron i_serial="15">
          <gDNA_intron_boundary i_start="54876" i_stop="54686" i_length="191">
            <donor d_prob="0.979" d_score="1.00"/>
            <acceptor a_prob="0.968" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="16">
          <gDNA_exon_boundary g_start="54685" g_stop="54252" g_length="434"/>
          <reference_exon_boundary r_type="cDNA" r_start="1576" r_stop="2009" r_length="434" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0025E22.1" gen_strand="-" ref_id="SGN-U574382" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>2009</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0025E22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U574382" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="67592" e_stop="67456"/>
          <exon e_start="67089" e_stop="67016"/>
          <exon e_start="65510" e_stop="65445"/>
          <exon e_start="65303" e_stop="65232"/>
          <exon e_start="63879" e_stop="63807"/>
          <exon e_start="63377" e_stop="63340"/>
          <exon e_start="63257" e_stop="63150"/>
          <exon e_start="60506" e_stop="60387"/>
          <exon e_start="60294" e_stop="60214"/>
          <exon e_start="60097" e_stop="60029"/>
          <exon e_start="57985" e_stop="57908"/>
          <exon e_start="57804" e_stop="57640"/>
          <exon e_start="56654" e_stop="56547"/>
          <exon e_start="55370" e_stop="55302"/>
          <exon e_start="55193" e_stop="54877"/>
          <exon e_start="54685" e_stop="54252"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCCAACTTCTGCATAGAAAAATAGTACGATGATATGCAGGGAAAACTGAACTCCGAAACGACAACTGATTTGAGGGCTTAGGGTTCCGACCGAATCACTCTCGGATTGAGAATTCATTGGAGACTTCATTTTTTCAGGTAATTAATTTGTTATAAAAACAATTCATATAATTAGAGTGGATAAAAGTTAGATTGTTTTTCCAGAAAAGTTGGAATGCCATACATTTGTTTGGCCAAAGTAAAACTGAGAATTTTGATGCAAATCATTGAATTGCTGACAAAAAAGCAGCCTTAGTATAGCTCATCACTGGTAGAACCCTAAAAGAGCTGAACACGCAGTCTCTTTTCGTTCACTGGGCGGGGCGAGTTTATATATTAGTTCACTGAAGTTGTGATTTCTTTTTCGATATCTTGAATAATAAAGGGTGTTGAATGATGTGTATTCACATACGCAATGTGGGTTTTCACCTTTAATGGGCTGTTCTTGTTTTTCTGGCTTAGCAGAACAGGAAATGAAAGGGACAGAGATTTTTGTTGGTGGTTTGGCCCGTACTACTACTGAAAGCAAAATTCACGAGGTTTGTTTCGGATTTATGTTACGTGATCTATTTGGTTCCTCAAGTTTATTTTTTTCATTTTTATATTTTTGGTTCAAGTTTGTTTTTTCTACGTTGAGCTTGTTTTGATTTTCTTTTTTTTGTGGATAAAACAAGTAAGTATTATTAACTGTGTGAGCAGTTGCTGAGAGTTACAAAAAGTGCTTAAAGGATGTTCCGAAGAACAAATATGATATCTACATTGTTAACAATTTCAACTTATCAACAATATCATTTTAAAGTTTTATGATACCAAAAACAAGGTCAGTTAAACACTTATGCATCAGTATATGACTAGGGTAAGTTTCACAATCAAAACACTTACCAGTGCTTCACTCGGCAGAGTCCACATGATTCATGTTGGGGTTGTAAACAAAATCTTGTGTGGAGTTTCTTGTGTGTTCCTACCAGCTGCATGGAGATGGTTATATCCAGAGTCCTTCACATTACTCGATGGACCCTAATTAGAATTTTTTTTTTACAGAATGATCTCATAACTCCCTCGCTTCCTTAAAATGTGAAAGAGATGATTAGCATCATCGATATCCTTTTCATACATATAACACTGATCTAATGGGATAAAACAGTCTCATTCTCTTGTTGTCTTTGAGTGAGATAAACATCATATACAAAGTCCAACTAAAGCATGTGACTTTGGGTGGAGCTTTACCTTGCGCAACAGTTACCCAGGCCATTCACTGGATGCCTTCAGCAGATTATGATAGTACTAGACTACTAGTTAAGTATAGCATTGCTTTGCACGTATGTTGCGTTAATTAATAACAAATGTATATAAAAAGAATAAGTTGTTGTGTGTATATTATGACATTGAGTACAATTTTTTCTTAAAAACAATAATGTAAAGCTGTGCGAATGTTGTAATATTTTAGGTTAAGTCTCCTATTGACTTGAAGGATTGAAGTTAGGCTAGATTGATTGTTCAATCAAAGGTATAAATTCACTGAATTCTAAGGATGAGTAGTTTTCTGCTGTCTTTGAGGGCTTAGTTGGGTCATTTTTTGAACAGACCATACTTCTTTTGAGGCAAGTAGTGTTTATCCCTTATTATGGTAATTGACGCAACCAATTGCTCCTTTTTGATCCTTATATCATAAATTGTTATTCTCATGAACTATATTACAAAATGGATATTATTTTAACTTCTATGTAATAATAATCAATTTTGTTCTTAAATAAACTATATGATATAGTTGTTTGTCAGCTTTATTCCTCTCTCTTGGGGTTGAATTGTTAAACGTAGTTATGCCCTTTTTTGTGGTAGATCAGTTTACCTATTCACATTCTGCACTTGTGAATTTATTTTTCTTGACTCTATTTTAATCTTTAAAAAACTAACAGAACACCCCTCGGCCAAAACCTATGATTAGAGCTGGACTTCTTATCGTCAATGATTTGTAACTATTTTATATCATCACATTGTATTTGTGTCAGATTATGTGTATATATAAAACATCTGCATTTTACAGGTATTTTCTTCATGCGGTGAGATTGTGGAAATAAGGTTGATAAAAGACCAGATAGGCAATGCCAAGGTAGTCAGTATGATCTGTTTATTTGTATTACCTCTTGTTTTCATGCTTTGCCATCCCTTAAAAAAAAAGCTAAAAAAGAGACATTAGAAAAAAACACGGTTTAGATGCTAATATTGCAGTGCTCATTTGTTATGACTACAGGGGTTCTGCTTTGTACGATTTGCAACAAAATATGCTGCTGACAAAGCTCTGAAGGAAAAATCTGGATATGTGGTAAAAGGCTAACAAAGATGCATTATTTCACTGTCTTGATAAACCATTACATTATTATTGGTTATTGCGATGGATTTTGCTTTTGTGATGCTGTTATTATTCATGAATGTACATAAGAACGACCACTTACTTGGATAAGCATTAGTGTATAATTCCTAGCCGAGACTTTTACTTGATGGCTTACATCTATTTGCAAAGGTTTGCCTTCTTTTAATTCAAGAATGTGTTCCTATAAAATAATGTTAAGAAAACAATCCGACTTACTCAGAATATTGATTTTTCCCCAGAATAAAAGATTGTCTGTATAACATTTTGACACTTTAACACTTTTAACTCAACACTTGAATATTTTTCTTCATGAAGAGCTTGAACTGCACATCTTGCTTTCTTGAAAGCTCTGAATTTGTATAAATGCTGGGATTTGTTCCACCAATGGGAGCAATTGATCAGTTCCTTGTTTTTTGCCCTTTTCCCGTTTTACTTTCTTTTTTCCATTCTTTGAATAGCTACAGATACCTAATTTGGTATTTGTTCAACTATGCACGTCTTTGTATTGTTGGGTTATCTCCTTACTTAATTATGAGCATTCACTAGATTATATGTTGTATTTTATAACATAGTCATGGACCATAGATCTACTAATAGTTCCTTGGATCCAGATAGTAAGCCCCTAAAATCAGGTGGGGCGCTATGTAGATCTTAACAGGCAACAAAAGGTTGGTTGGTGCATTAAACTACCTTTCTGTTAACACATCAAGCTCTTCTTTTGGTAACGATCGTAGTTTGTCAATTCATGCTCTGCTAGCACTGATCATCGGGATGCTGTTGTATGAACTATAAAATACTTAGTAAAGTACCAAGCTAAATGTTACTATACAAAGATGGAAGGAAATTCTCAAGATATAGGATACTTTGACTCAAATTGGGTTGATTCTCCTATTGATCAACTATTTATGTTTGGATACTATGTCTTTTGTGGTGGTGACTCTGTATTATGGAACAGTAGGAATCATAACATTTGTTTTATCACATGATTCCAATAAGATAGAATTGTAAACTTACTTAGTTAATGCAAGTGAAATCTAGAAAGGTGACGTATAAAAAGGAACGGCGAGAGTATTATTTATCTGACTCATATTGGCCATTTCAAATTTTTCTTTTGATGACCGAGAAATCCCTGAGGGCCAGTTGCTCACGGTTTGAAAGTTGGTGACTGGATAAGACTACTTCTCTCTTAGTATGAAATGTTTGGAAAATATTCATCTTGTTATGAGTCTGATTGTTTGTAATCTGTTGAACAGTGAGATTTTCTCCCTATTACATTTGATATATTTTTGTGGCTATTATTTCAGCTAGATGGGAAGAAAATTGGGATTCGCCCCTCAGTTGAGCAGGACACACTATTTCTTGGAAATCTTAACAAAGGTTTGTTTCATTTTTCTTGCAAATCTATTGTCCAAGATTTATTGCCGACTTAATTAGTGTCTTTCTGTGACATTGGAGAAGCTTTATAATGACAATATCAAGTTACATTCAAATGCCTTCATTCAAAATGTGAAGATGCCATTACATAGAAGATATTTTGATCTTACAAGGACTTGCATTATCTTACAATTTTATGGGCTGATATTTCATACATATCCGTTGTCTTGATTAAATTCTCTTTTTCTTTCTCTCATTCATTTTGGGCTTTGTGCACGTGGTAGTTTATAAGGATACATTTTCCTCTCCAGAGTAGTGAATTTGAACTTTAAAGGATCTTCCTTCTACTTATGTTTTCTTTGGCACTTGTGGAAGAGACAAGTTTTTTTATAACTGTACGCATTCCTTATTGCTTGTCTGGATTATTTAAAGGTTGGGGTGCTGAGGAATTTGAGAGTATTGTGCGCCAGGTACACCTTTTAACTGCTTACAGTGCACTTTTTTAAAAATCTCTTGAAATATTGATGAATATTCATCTCTCCCTCTCTCTAGGTTTTTCCAGATGTTACATCTGTTGATCTTGCAATTCTTGGAGATGTCCAACTTGGTCAGAAGCAACGGAATCGGGGATTTGCCTTTGTGAAATTTTCATCTCATGCTGTAAGTGCCTCTGTCTATGTTTAACATTGTTAATTAGTATTATGGTTGTTGGACAATTTCAACTTTTTTGTAACATCACTTTTACTCATATCGTTGCATCTTAAATACTACAGGATAGAAGCTCAGGTTCGTGCTTTTGATTCTCAGTTCCAGAACCAAATTATGATGCCTAGGTTCTTGAGGAATCTCCCAATATGAAATAAACTCTCAGACATGTTATTAACCTCATTCTATAAACAAGAACACTCTCAGACATGTTATTCACCTCACCTTATAAAAAAAGAACACTCTCAGACATGTTATTACAGATTAAGAAAGTGAATCCTTGAATTATGATAATAGCATTCTTTTCAATCTTTAACATAAGACTGAAATGCATACCAGATATTCTAAAAACGTGAAACAAAAGCTGCAGAATTTGTTCTCTACAAAATTTTGAACACCACATGAAAATGTTATGTGTGCTAGTGAAATTGGTAAGTAACATGCTTATTAGAAACTAAAAAGGACAAAATAAAAGACGCTCCATATTTTTATGTGAATTCGAAGCGTAATGCTACTATTTTTTTTGATAACCGTGGTGTCCGAGCCAGCTTTCGCGCGCTTCGACTAATTCCATGGGATACTTGCTACCTCTATACCATTTGTATATCCACTGAACTGGTGAAGTGCTATCATCTTCTTGTACTTGTGTTGTTTTAACTTTTAGCGTCTCCAGGGCTGCTATCTCCATATGGACTTCAAAAACTCCTAATGACATCTGATCATTGATGCCTCCAATGTTCTAGTGTCCATGTTTTCATCTACTAGTCTTAAAGTACGCACTTTGCGCGTGTTTCCTATACTGAAATGTTAAATGTTAAAGCAATGAAATGATGTAGATAAGATAATTAAAATTTAATTAATTTCAATGTCTCGAATATTTAGATTTCCAACTAAATTCGAATAAGGACGAATTTGATACGTATTTTAATTGATTTTAAAATCCTAAATACTAAGAAGCATTCACATGAAAAGTATTATACTTACGTTACATAATTCAAATAGAAAATAATTATACAAGATAACATTTTAATAGATCTAAAATTCTTTTACAACCTCTTGCAGAAATGCACGGTAAGACTGCGTACTGCATACACTAGACCCTTGTGGTCAGACCCTTCCTTGGACCCCACGCATCTTAAGTGCTATCGCCTCAATATACTGTCACTTGGTTATCTCTAACAATATGGTTTCCTTCTGTGGTGCTTATATACTGTCACTTGGTTATCTCTAACAATATGCTTTCCTTCTGTGGTGCTTTAGTTTGCTGAGATCAGCTTGATCAGTTGCTTCAATTTTCTTCAATCCCATACTTCTTGCAGATATTTCCAATGTCTGACATACTATACAAAAAAGAATATTATTGGACCAATGTACAGGTCAAAAACTTATTTGCCGGTGTTAAGAATTATAGCTTATAAAATTTGTCCAATTCTACCCAATCATGAATTATTTACTAGACTTTTCCTATAAAACCAATTTTTAAGCCTTCTGTGAACAATTTACTTAATCTCCATATAATATGATAAGTCGAATATACTGCTACTAGGTCCTAAGCTAAGTTTTGATCTGTTCAAAGTAACAGTCGTTTTTTTCCTTCTAAAAGGTTATTTTACTCCAATCCCACAAAAAGGGAGAACGTTCCTTACATTTTCCAGCTCCAAACTTAGGTATCTTTGCTCAGGCCTACCAGTGCCGAGTCATTACTAGATATTCATTTGAGATGCTGGGAGAATCAAGCCACGTCTTCATCGGTGCACATCTTTTATGTTGATTTCTGTCTTACAAATGACACTTCCATATTATAGAGCCCAAACATTAAAAGCCATACAAAAAAATCCTTCTACGTCCATTTATATTATAGATAACAGTCACAAAATGTGTGAATGGGCACTCTGTTGAAGTTGTATTCTGGATCAAAGTAGCTCTAGAGCAATTGATAATCTTAAATGAAACTATTATCTTATAGATATTAGCTCTTATTTTTTGATTTATCAAAAGATACAAAGAATTTCATATACCAATCCCAGCTAGTTTAGGATTAAGGCATAGTGTTTGTTGAAATAAAAAAGAAATGCTTATATCCATAAATCTCAGTCTCAATGCCACATTTTAAAAAACAACTCCTCATTTTGGAAGTTGTAATGTCGAGCTTTGTGTCTGCCTTGATAGGATCTAGATAGCTTTTAAGTGAGCAACTAAACTTTGTTAATCCTCGAATATGAACTTAACAAACTTCATAGGAATGTAATCTGCTCAATTTACAGCAAGTTGGGTCAAAATTGGAACCCTCATTTGGCCTTTAATCTGTTGCCTTTCTGAGCTGAAATCACTGTATTTTGCTGTGCAAGTTCAAGAATCAATGAAGAAGTTTATGCTGTAATTCATACTTAAAACTCCCAAATTTATCCTTGTCTGCTTCACTGTCATGTTAACATGTTTCCCAAAAATCTCGAATATTGTGCAGTAGCCATTGATCACTGCCAAATAAATAATTCAATAAAATCCAATACTTCCATCCCATTATGAATATGTTACTCTAATGAAAACAATCCTGTAAGATCCCAAAATATAAATTTCCTTCAAAATTCTCAATCACAGGCTGCAGCTCGTGCTTTACGGGTAGGCTCCCAATCTGATTTTCTCATCGGTGGCAACTTGCATCCATCTGTACAGTGGGCTGAGGAGGAATCTGAAGTTGATCCTAATGAACTTGCTCAGGTTTCTTCCAATCGTCCATTATTAAGATATTTAGAGAATGAAAATTTCTTAGATTTCTGTCATTTTCACCTTGCCTTTGTTTGGATTGTCAGATCAAAGTAGCCTTTGTCAGAAATGTACCTCCTGGTGCTGATGAAGATTACTTGAAGAAGCTCTTTCAGCCCTTTGGCAATGTATTATACCTTGCAGTTTCATTTTGATGTTTTCCCGATTACTCCAGTTGCATTGAAAATTCAAAAAGTTGAACTCTCTGATGACATCTACCATACATATGGTTAATATATCTCAGGTAGAGAAGGTTACTCTCTCCAGGAAGGGTAGTTCCACCATTGGATTTGTTTACTTCGATAAGCGATCTGTAAGTTCTGCCATGTCATTGTTAGTAGGCGTTTGACTTTGATTCTTGGAGTTCTACTCCTGTTCCGACTACTAATTTCAACCCCCCCTTGTAATTTTGTTGAATGGGTACCTTATTTTATATTTTGTCCGCCTTCAAAATAAAAAACCTAGAACAAGAAAACAAATTGACTATTTTGAATTTCAAATTTAGGTTAAAGTTCATGCAGAATGTAGTCTTCGACACCTAATGATTGAACATTTTTAGTTTTCAGAGATAGTCTCCCTTCCCCAATCAAACAGCCTTCTTTTGAAAGTTAGAGTCCATATCTGATTTGTCCATACCTCCCTAACTGTAGCTTCTTGCTGTTGATTAATGCTGTATATATCAGGATACAGGGTCTTCAGAGATCCTCTACCCAATTAGTCATCTTCCCAGAAGGCTATCTTTATACCATTGCCTACTTTGAAACTGGTTTTCAAGCTGGATTTGGACCATAGATTACTGATGGTTTTCCACAGACCGACACCATAAGTACTGCTGACTTCTTTAGTTATCCACACCCCTTCCATGTCATACTTAGCTTTGATTACCCTTTTCCACAGAGACTGCTCATCAGAGACAAATCTCCATAGCCATATTATCTGCAAACTTCGATTTTGGATTCTCAGGTTCTTAATTCCAGGCATCCTTCCTTCTTACTGAGTAGAAGGTCATTCCATTTCACTTGGTGGATCTTCGTTTGTCACTATTGCCTTCCAAATGAAGTTTCTTCTTAGTGCATCAATTCTGTCGACCACATTTACAGGAATTGGGAACAGAGACATCAAGTAAGTAGGCATAGCATCTAGGACAGCATTGATGAGCACTACTCTGCCTCCCAATGATAAATACTGGCTCTTCCAATTAGATAGCTTCTTCTCACACTCTTTCAACCTCTCCATTCCATATCTCCTGAGATCTACTCTTTGTCCCAAGAAGCATTCCTAGGCAAACAGCGGCTATTTCTCCAATCCTTCCTAGAATCTGAGTTGGCTCTTGGAGATCTAAGATTTCATTCACTGGTTAAACAAAACTGTTATTCCAGTTGATGTTTAGAAAGTGCATATTAATCTATTGAACTGATCATCCGTCTTCATTGTCAACTCTTCGATATGATGCATAGATCCATCGGAGCACTTTATGCCAAACACTACTTTTATATGTCTTCATTGTTCCTCTCATTCCTGAATCTACAATGTCTCTTCTCATCTTCTTCACATTCAGTAATCTCTAGCCCCATTACGACATTCTCTGTTGACTATGACTCCTTTACCCTTAATTGTGTCCATTAGCACTGTAAATAATAAATGCTCTCACAGTTCTCTTACTCGCTATGTAATTTTAATCATCTAATTATCTTTATTCATATTGAAATATTGACGGTAGATTAAATTGCCAAGTGATGTTAAGAGGTAAGCTGTTTGTGCCTGGTCAACTACAAGAGATTCTTCCAAACCTATGGCAACAAAGATTAGCTGCCAGGCAATTTTGGAGCTGATTAAGGTGGTGGGACAATTACCTTAACCCTCGATATTCAATGGAGTAGGCTAATGCTAGGGGATCTATATAGTGAGGGCTCAAGGAGGTGAATTCAATGGGCAGTGGGAGAAGGGACTGATGTCCTTAAAAGGGGTGTTTTGTCTTCATACATGAGCGGGTGTGTGAGAGAGTAACAGAAAGTTTTGCAATGGAGCCACTTGAAAATTTCTTGAATCACAGTTTGTCATTAGTTTCCTACCATTAATATGCTTGCAAGTCTTGTTCAACATCATCAAAGCTACTGCTACTTGTGATGAATAATAGACAATTAGTATTCTTCTTGTCTAGAGTCAGTACAATAAACTAGAAGGATATGATCCATATAGTAGCATTGAATATCAATTCTGCGGTATGCTTTTATTAGGGGACACTAGAAAAAAAAAAGGGACCCTTAAAATTGCAATTTCGCTTTATTATAGCTGACATTGTCTTTCTTTTGTTTCTTTTCCTACCCCCATCTACCAACGAATGCCTCGAGGATAGGATCTTGACAATGCTATTAAAGGATTGAATGAGAAAACTGTACAAGGGCCAAGGGGAGGTCCCTCAAGCAAGATTCAGGTGATTTTTGTCCTTTCTAGTTTTCGTAAGTTGTCCAAGCTGATATCTTCAACAATAGTTTACAGATATGTAATATTGATGATTAATTATGATTTGCTAACAGGTCGAAGTTGCGAGGCCAACTGATAAGAACAGGAAACGAGGTCGTGAGGATCAAAAAATGTCCAGTAACATTGAGAGTCATTCCAAGCTTTTGAAGGATGATCCAAATGTTGAGATGGTTGGGGGTCCTAAATCAAAAGCTCAACCGGTGATGCATCTATCAGATGTTAGTTTCTTTTTTGATATCTCAGATGTCTCGTCTCCTTTAATATATTTTATTGGCATTTTAATGTTGCAAATATTTGCCGGTACAATTTCTTCGAAAATAAAGTAGAAGCGGCTCTGATAGAAATTTCCTGGTTTGCACTGGGCAAAGCTTATATGATGCTTCTTCTTTGTAGTATACAGTCAGTTCTTTTCAAATATACAACTAAGGCCGCAATCTCAAGCTAGTCGGGGTCACCATATGAATTTACACTATCTATTGCACACTATCTGAACCTATTTCATTGGATAATCTGTAACTTGAAGCATGGTATTAGACGTTCTCTAAATCTGCACGGATTCATGGGACTGTAAGTGTTTGAGATAAGCTCGTTTTGTGATTTTAGGTCCTTAAGTAAATTCATTCTATGAGATTTTTGGGTCTTTAAGATAACTTCATTTTATGTGATTTTAGGTGTACTTCATTTCTTTTCATTTGGACTCTATGTAGGACATGACCGAATTGTCTCAAGAGACCCTTCACTTTGTTCTCTATTTGTGCTACTTACACCTTATGGCGTATGACCATTCCTGATTTTATCTAATGTTGTATGATGCATCTATCTTAACATTAAAATTTCTGCAACACTTATGTTATGGATACGGGACCTTAGAGGACTGACATTCACTCCCATATAACAATGCTAGTCCAGTAATAGTTTTGTAGAACTTGTCTTTTGCTCTTGTAAATATCCTCCTAGTGCATAATATTCTGGTAGCACTCCACTTCAACCATGGAGGTTTGATGGGATGGGAATCCCATATCAAGAAAATATAATAAGAATAATAATATTGTGTTCAATGTTATGAACATAAATGCTTGAAGCGAGTCTATTTGAAGTTATTGTCAGCTGCATGATTGAACTGTTTAAGCCCAATTTGATTTGAATGGTTGTTATTTTCCATTCAACTCTGAATCTGTCATCTTATACTTTTTCTTCAATCAGGAAATGGATTATTTGGATCCTTATGAAGCTGCTGTAATTGCACTACCTGTGCTTGTCAAGGAGCGTTTAGTTCGGATCTTGCGGCTTGGTATTGCTACTAGATATGATGTAAGTTAACGGATGGACTCTACTACCCGAAGCTATAGTTCTGTTCATGTATTATGTCTAATTTATCAAGAAGGTTTTCATGTCAATTCTAGCCAAAGTATTGTTATTAATTTTGTTCTCATCAACAGAAAAATATGAAATTTCTTCTTTTTTCTGTGAGTATGTATTGACAAAGAAAGACAAGTTCCGTTTTGGTCGCCATTATCTAGTTTGTTTGTATTGGCTTCAAGTGTTTGTTTATTGAGCTGCCAAACAAGCTGATATAAAATTTGTGATCCTCTTTCTTGCCTCTTCATTTATATGGGTTATAGTGGCAAGATATAAATTCTTCGTTTTCTTTCAAGTGGTATCTGTAGTTATCAATTCTGTTTCACTAATATAATCTAATGTTAGTGAATTTATCCATGTTTTTGATGGTTTATTAAGGGCGTGTTCAGTATGAAGGTTAATGTTTTTTGGGAAAATAAGTGGATTTCTTACTTATTTTCTTGTATTTAGTACTTAAGCACAAATTATTAACGTAAAAGAATTTTTATATAATCTAAGACAAATTCTATGACAGGTGGGGGTGTGGGGTGGTGCTATGGTGGGGATAAGGAACTATGAAGGTGGGGGTGAAGATGAGGTTTATTGGAGGGCAAGGAAGAAACAACCGATGTGGAATGTTGCTTGTGGAATTTGTTTTCCCTACTTTCACTAGGGAAGTCATTTTCCTCATTGCAAGGAACTTCTTTTCCTAGACAAAATATGTTCAATAACATTGACCAATCAAACATGGGTAAACAAGTTCCTTGTTCCATACATACACTCCCTAATCCATGGAATTTATTTCTTAGGATCAGGGATAGGCCCACTTTATCTCTGCAGAAGCTGAAAAATTAAGACATGTAAATTCTACAAATACATGATTTACTTTCTGCAGAAAAACTAAGACATGTAAATTCTACAAATACACGATTTACTTGTATGTTTGTGTGGTCAAAGGACTGACATGTTTTTACCTGGTTAGCATGTTGCATGGTGAAATCTGCATAAATTATCATGCAACATAAGCTCTTCACCTGCTTTATGCGACATCTGTTAGGTCATAATATTTGCTGAAATGTATTTCTGATGTTGAATGTTCTGTGTTAATCCTGTACTGGCTAAAGGTTTTGAATGTGTTTTTATTCTCAGATAGATGTTGTCAACCTAACCAGTCTTAAGATGTTGCCCGAGTCAGCTGCCATATCTGTTCTTGACCAGGTCTGAAATATTTATACCTCTAGTATTCCTAGTGAAAATTTTAGTATATTCTACAGCAATTGAAGATCGACTCTCATGCTTCTATTCTCCAATGTCTTTCATTTATAGCTCATGTGGTCTGAAGCTGATATGCAGAACAAGGGAGGATTTTTAGCTTCATTAATTTCTAAAGTATGTTCTGCAGAGTGCAGATAAGCATCGAAAGTGTTATCTTTGTTAGTACTATAATATTTTGCGCGCTTTATTTAACAAAGTCTTCTCTGGAAATAGCAGCAGGTTGAAAAGCTGGGATTGAAACAGTTTGATAGCAAGTCAAGGGTAGAAGATGTTGCCTTGAGGGTACCAGAACCAGACAGCTTCTCTACAAGAGTTCGTTTGCCACATCTAGATTCATATGCCTCCCGAGTACCCTTGCCCATGGCTAGGTTAGCTAACACATCAACTCTAGATTATTCTAAAACTATGCTGCATGTCTGGTTCTAAGAGCAGAATGATGTTGACCAAGTAAATATTCTTGGAGTGATAATATGTTTTTGCCGGCTCTTTAGTGACACCTATTATTGAAGGTAGACAACTATTGAGGTAACAGAACCACTTTGCTGCTGGTTTCTTGCAGGGCTGATGTTTACACATCTCGCTATTCAGCGTATTTAGATCCCTATCAATCTGGTCGGGTGACAACAGAGAGGATGGAGGAAGCAAGTTCCCATTTGCAGGGGACTTCACTTACGTATGGTCAGGTGACAACGAGGATGGAGGAAGCAGGTTCTATTCACAAGAAAAGGATGGAGGAAGCAAATCCCACTTTGCAGTCGTTCCTCTCTGGCGGGGTGACTAAAAGGAGGATGGAGGAACCAAGTCCTTTGCAGGCAACATCCCTTCCATCTGGTCGAGTATCAAGGATGGATGAAGCAGGTCCCACTTTTCAGGCATCTTGGAGTCCTTCAGCTGCTGCTGACAGAGTTGGACTTCATTCACGCATTACCCCAACTTCTGATCATCAACAGACTCGACCACGGATCAGGTTTGATCCCTTCACTGGTGAGCCAT</genome_strand>
        <mrna_strand>GCCAACTTCTGCATAGAAAAATAGTACGATGATATGCAGGGAAAACTGAACTCCGAAACGACAACTGATTTGAGGGCTTAGGGTTCCGACCGAATCACTCTCGGATTGAGAATTCATTGGAGACTTCATTTTTTCAG..............................................................................................................................................................................................................................................................................................................................................................................AACAGGAAATGAAAGGGACAGAGATTTTTGTTGGTGGTTTGGCCCGTACTACTACTGAAAGCAAAATTCACGAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTTTCTTCATGCGGTGAGATTGTGGAAATAAGGTTGATAAAAGACCAGATAGGCAATGCCAAG.............................................................................................................................................GGGTTCTGCTTTGTACGATTTGCAACAAAATATGCTGCTGACAAAGCTCTGAAGGAAAAATCTGGATATGTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAGATGGGAAGAAAATTGGGATTCGCCCCTCAGTTGAGCAGGACACACTATTTCTTGGAAATCTTAACAAAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGGGGTGCTGAGGAATTTGAGAGTATTGTGCGCCAG..................................................................................GTTTTTCCAGATGTTACATCTGTTGATCTTGCAATTCTTGGAGATGTCCAACTTGGTCAGAAGCAACGGAATCGGGGATTTGCCTTTGTGAAATTTTCATCTCATGCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGCAGCTCGTGCTTTACGGGTAGGCTCCCAATCTGATTTTCTCATCGGTGGCAACTTGCATCCATCTGTACAGTGGGCTGAGGAGGAATCTGAAGTTGATCCTAATGAACTTGCTCAG............................................................................................ATCAAAGTAGCCTTTGTCAGAAATGTACCTCCTGGTGCTGATGAAGATTACTTGAAGAAGCTCTTTCAGCCCTTTGGCAAT....................................................................................................................GTAGAGAAGGTTACTCTCTCCAGGAAGGGTAGTTCCACCATTGGATTTGTTTACTTCGATAAGCGATCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCTTGACAATGCTATTAAAGGATTGAATGAGAAAACTGTACAAGGGCCAAGGGGAGGTCCCTCAAGCAAGATTCAG.......................................................................................................GTCGAAGTTGCGAGGCCAACTGATAAGAACAGGAAACGAGGTCGTGAGGATCAAAAAATGTCCAGTAACATTGAGAGTCATTCCAAGCTTTTGAAGGATGATCCAAATGTTGAGATGGTTGGGGGTCCTAAATCAAAAGCTCAACCGGTGATGCATCTATCAGAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAATGGATTATTTGGATCCTTATGAAGCTGCTGTAATTGCACTACCTGTGCTTGTCAAGGAGCGTTTAGTTCGGATCTTGCGGCTTGGTATTGCTACTAGATATGAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAGATGTTGTCAACCTAACCAGTCTTAAGATGTTGCCCGAATCAGCTGCCATATCTGTTCTTGACCAG............................................................................................................CTCATGTGGTCTGAAGCTGATATGCAGAACAAGGGAGGATTTTTAGCTTCATTAATTTCTAAAGTATGTTCTGCAGAGTGCAGATAAGCATCGAAAGTGTTATCTTTGTTAGTACTATAATATTTTGCGCGCTTTATTTAACAAAGTCTTCTCTGGAAATAGCAGCAGGTTGAAAAGCTGGGATTGAAACAGTTTGATAGCAAGTCAAGGGTAGAAGATGTTGCCTTGAGGGTACCAGAACCAGACAGCTTCTCTACAAGAGTTCGTTTGCCACATCTAGATTCATATGCCTCCCGAGTACCCTTGCCCATGGCTAG...............................................................................................................................................................................................GGCTGATGTTTACACATCTCGCTATTCAGCGTATTTAGATCCCTATCAATCTGGTCGGGTGACAACAGAGAGGATGGAGGAAGCAAGTTCCCATTTGCAGGGGACTTCACTTACGTATGGTCAGGTGACAACGAGGATGGAGGAAGCAGGTTCTATTCACAAGAAAAGGATGGAGGAAGCAAATCCCACTTTGCAGTCGTTCCTCTCTGGCGGGGTGACTAANAGGAGGATGGAGGAACCAAGTCCTTTGCAGGCAACATCCCTTCCATCTGGTCGAGTATNCAGGATGGATGAAGCAGGTCCCACTTTTCAGGCATCTTGGAGTCCTTCAGCTGCTGCTGACAGAGTTGGACTTCATTCACGCATTACCCCAACTTCTGATCATCAACAGACTCGACCACGGATCAGGTTTGATCCCTTCACTGGTGAGCCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0025E22-LbUfe/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U566651" ref_strand="+" ref_description="SGN-U566651 Tomato 200607#2 [2 ESTs aligned] (*GB) gi|28628063|gb|AAO25511.1| (e_value=0) 4-coumarate:CoA ligase-like [Nicotiana sylvestris]; (*ATH) AT1G62940.1 (e_value=4e-136)  Symbol: None | 4-coumarate--CoA ligase family protein / 4-coumaroyl-CoA synthase family protein, similar to gi:112801 from Petroselinum crispum, GB:AAD40664 from (Solanum tuberosum) (J. Biol. Chem. 266 (13), 8551-8559 (1991)); contains Pfam AMP-bind... ; (*SWP) sp|Q9LQ12|4CLL1_ARATH (e_value=4e-135) 4-coumarate--CoA ligase-like 1 OS=Arabidopsis thaliana GN=4CLL1; ">
      <seq>aatgctcacaaaagcaagaggaagatgaacacattttccgaagtagatatcctccagtccatgtaccagacaatgtgactctcccagaatttgtacttcataatgtagagttatacgctgacagactggcttttgtggatgctaccacgggcaaaggctacacatatggcgaagttgaaagagacataaggaggtttgccaaggccttgaggtcccttggcttaagaaaaggaagggttgtgttggtagtgcttccaaatgtaccggaatatgctattgttgctcttggaatcatggctgctggtggtgtcttttcaggtgcaaatccagcagctcattcatccgaaattatgaaacaagttgaatctgctgatggcaagcttattgtctctgatctacccacctatcacaaggtgaaagattgtggattgccagtaataatactaggcgaagaacgtgcagaagggacgattcattgggatgaattgctcgaagctgcagatcgtgccagttccagaactgatcacataacaaaccaagaagatgaaattgtgcaaaaaagtgatctatgtgcactgcccttttcatcaggcacgacaggactatccaagggagtgatgttaactcacagaaacctagtagcaaacctctgctctacactctttagtattagtccagaaatgataggtcaagttacaatactaggtctgataccattctttcacatttatggtataactggaatctgttgtgcaaccattaggaacaaagggaaagtggttgtcatgcgtaggtacgaactgagggcatttctaaatgcactcatcatacatgaagtctcatttgcacctatcgtgccacctatcatcttagcacttgttaagaatccgatcgttgatgaatttgatctcaaaaagcttaagcttagatccatcatgacagcagctgctccacttgcccctgagattcttaatgaatttgagaagaaatttccggatgttcaagtccaagaggcatatgggatgactgagcacagctgcattactctttcccacagcaatcagcacatcgcttaaagaaattccgttggttttattctgcctaatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0025E22-LbUfe/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0025E22.1" temp_strand="-" temp_description="C02SLm0025E22.1  AC215476.1 htgs_phase:3 submitted_to_sgn_as:C02SLm0025E22 sequenced_by:kribb upload_account_name:korea">
        <position start="71207" stop="69076"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70907" g_stop="70495" g_length="413"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="413" r_length="413" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="70494" i_stop="70175" i_length="320">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.978" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="70174" g_stop="69575" g_length="600"/>
          <reference_exon_boundary r_type="cDNA" r_start="414" r_stop="1013" r_length="600" r_score="0.997"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="69574" i_stop="69470" i_length="105">
            <donor d_prob="0.775" d_score="0.98"/>
            <acceptor a_prob="0.896" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="69469" g_stop="69376" g_length="94"/>
          <reference_exon_boundary r_type="cDNA" r_start="1014" r_stop="1107" r_length="94" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0025E22.1" gen_strand="-" ref_id="SGN-U566651" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>1107</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0025E22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U566651" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70907" e_stop="70495"/>
          <exon e_start="70174" e_stop="69575"/>
          <exon e_start="69469" e_stop="69376"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATGCTCACAAAAGCAAGAGGAAGATGAACACATTTTCCGAAGTAGATATCCTCCAGTCCATGTACCAGACAATGTGACTCTCCCAGAATTTGTACTTCATAATGTAGAGTTATACGCTGACAGACTGGCTTTTGTGGATGCTACCACGGGCAAAGGCTACACATATGGCGAAGTTGAAAGAGACATAAGGAGGTTTGCCAAGGCCTTGAGGTCCCTTGGCTTAAGAAAAGGAAGGGTTGTGTTGGTAGTGCTTCCAAATGTACCGGAATATGCTATTGTTGCTCTTGGAATCATGGCTGCTGGTGGTGTCTTTTCAGGTGCAAATCCAGCAGCTCATTCATCCGAAATTATGAAACAAGTTGAATCTGCTGATGGCAAGCTTATTGTCTCTGATCTACCCACCTATCACAAGGTACGTAAGCTTCCAACTTATCAGTGGATTATGTAGAATTTTGCCTTACAGTGTCTGCACATTATCTATGATTTGTGTATGGGGTTACAGAGGTTTTAAGGCTTTACTTCTTGTTCAATCGATGTTTATTATATACACACGGGCACGTACTTGTTTAAGAAATTTGAGATGACACCTCTTGTAGAAGAGTGTCTTCAGATGGCTCATTAGGACCAAACTTCTTGTACTTGTTACTCGTATTGGTCCAACTAAAACTTGCATTCTACTATGATGGAAAACAAGATGCTTTCATTTTCCACCTAAAGTAATGGGAATTGCAGGTGAAAGATTGTGGATTGCCAGTAATAATACTAGGCGAAGAACGTGCAGAAGGGACGATTCATTGGGATGAATTGCTCGAAGCTGCAGATCGTGCCAGTTCCAGAACTGATCACATAACAAACCAAGAAGATGAAATTGTGCAACAAAGTGATCTATGTGCACTGCCCTTTTCATCAGGCACGACAGGACTATCCAAGGGAGTGATGTTAACTCACAGAAACCTAGTAGCAAACCTCTGCTCTACACTCTTTAGTATTAGTCCAGAAATGATAGGTCAAGTTACAATACTAGGTCTGATACCATTCTTTCACATTTATGGTATAACTGGAATCTGTTGTGCAACCATTAGGAACAAAGGGAAAGTGGTTGTCATGCGTAGGTACGAACTGAGGGCATTTCTAAATGCACTCATCATACATGAAGTCTCATTTGCACCTATCGTGCCACCTATCATCTTAGCACTTGTTAAGAATCCGATCGTTGATGAATTTGATCTCAAAAAGCTTAAGCTTAGATCCATCATGACAGCAGCTGCTCCACTTGCCCCTGAGATTCTTAATGAATTTGAGAAGAAATTTCCGGATGTTCAGGTCCAAGAGGTGAACATCCACTAGAAACTTATAATGGTCCTTCTCATGTCAACGAATTATTCAGTCCAAAATGTTGTTTTTGACAAGTTCTGTTCTGGCTTATTCAACTGCTAGGCATATGGGATGACTGAGCACAGCTGCATTACTCTTTCCCACAGCAATCAGCACATCGCTAAAAGAAATTCCGTTGGTTTTATTCTGCCTAATT</genome_strand>
        <mrna_strand>AATGCTCACAAAAGCAAGAGGAAGATGAACACATTTTCCGAAGTAGATATCCTCCAGTCCATGTACCAGACAATGTGACTCTCCCAGAATTTGTACTTCATAATGTAGAGTTATACGCTGACAGACTGGCTTTTGTGGATGCTACCACGGGCAAAGGCTACACATATGGCGAAGTTGAAAGAGACATAAGGAGGTTTGCCAAGGCCTTGAGGTCCCTTGGCTTAAGAAAAGGAAGGGTTGTGTTGGTAGTGCTTCCAAATGTACCGGAATATGCTATTGTTGCTCTTGGAATCATGGCTGCTGGTGGTGTCTTTTCAGGTGCAAATCCAGCAGCTCATTCATCCGAAATTATGAAACAAGTTGAATCTGCTGATGGCAAGCTTATTGTCTCTGATCTACCCACCTATCACAAG................................................................................................................................................................................................................................................................................................................................GTGAAAGATTGTGGATTGCCAGTAATAATACTAGGCGAAGAACGTGCAGAAGGGACGATTCATTGGGATGAATTGCTCGAAGCTGCAGATCGTGCCAGTTCCAGAACTGATCACATAACAAACCAAGAAGATGAAATTGTGCAAAAAAGTGATCTATGTGCACTGCCCTTTTCATCAGGCACGACAGGACTATCCAAGGGAGTGATGTTAACTCACAGAAACCTAGTAGCAAACCTCTGCTCTACACTCTTTAGTATTAGTCCAGAAATGATAGGTCAAGTTACAATACTAGGTCTGATACCATTCTTTCACATTTATGGTATAACTGGAATCTGTTGTGCAACCATTAGGAACAAAGGGAAAGTGGTTGTCATGCGTAGGTACGAACTGAGGGCATTTCTAAATGCACTCATCATACATGAAGTCTCATTTGCACCTATCGTGCCACCTATCATCTTAGCACTTGTTAAGAATCCGATCGTTGATGAATTTGATCTCAAAAAGCTTAAGCTTAGATCCATCATGACAGCAGCTGCTCCACTTGCCCCTGAGATTCTTAATGAATTTGAGAAGAAATTTCCGGATGTTCAAGTCCAAGAG.........................................................................................................GCATATGGGATGACTGAGCACAGCTGCATTACTCTTTCCCACAGCAATCAGCACATCGCTTAAAGAAATTCCGTTGGTTTTATTCTGCCTAATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0025E22-LbUfe/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U580309" ref_strand="+" ref_description="SGN-U580309 Tomato 200607#2 [67 ESTs aligned] (*GB) gi|82621176|gb|ABB86276.1| (e_value=0) mitochondrial; (*ATH) AT3G02090.1 (e_value=0)  Symbol: MPPBETA | mitochondrial processing peptidase beta subunit, putative, similar to mitochondrial processing peptidase beta subunit, mitochondrial precursor, Beta-MPP (Human) SWISS-PROT:O75439 | chr3:365556-368918 FORWARD | Aliases: F1C9.12, F1C... ; (*SWP) sp|Q42290|MPPB_ARATH (e_value=0) Probable mitochondrial-processing peptidase subunit beta OS=Arabidopsis thaliana GN=At3g02090; ">
      <seq>aagctttcttagtcgaccagagcgtgcttcttgattttcttgagcttcgttcccatttccctctttctctgtataggaaccacaacaaaccctagcctaatttacaagccatagccatgacgatccggcagctcttaaccctagcccgccggtcccgaaacctatcctcatcccattcactgcggcgtctttcttcggcgtctgccgccgtcgccgccacatcctcctccgccccggccatcggtccgccacccccagatgcaatgatctacgatcgattggctgaagacgttaaacgaaagatcaagagactcgagaatcctgattcccgattccttcagtacaactcgccacacccaactttagccgaccacacatcaatcctcagcttcccctctacgcgcgtgactacactaccatcgggcctgcgtgtggccacggagactaatctcgctgtcaagactgccaccgttggggtattcattgatgcagggtcaaggtttgagaccgatgagactaatggaacagctcattttcttgagcatatgatctttaagggtactgaaaagaggacttcttgggaaatggaggaggagattgagaatatgggtggacatttgaatgcatatacttccagggagcaaacagcatactatgctaaagtgttggataatgacgtccctgtagctttggatattttggctgatatacttcagaattctaagttcgaagagaaaaagattgaacgtgaacgtgatgtcatcctcagggagatggaggaggtcgaaggtcaaacagaggaagtcatctttgaccacttgcattcaactgcattccagtactcacctttgggtaggactattcttggacctgcccagaatataaagacaatcaccagaagtcatctgaaggactacatatcaacacattataccgctcccagaatggtaattgttgcttctgggcctgttaaacatgaagaatttgttgagcaagttaagaaacagtttactaaactttcaaccaatccgagtacggcctcagaattggttgccagagaaccagcaatttttacaggttcagaggttagggtaattgatgatgacattccattggcacaatttgctgttgcttttcaaggggcaccgtggactgatccagatgccattccactgatggtaatgcaatccatgctgggcacttggaataaaaatgccggaggagggaaacacatgggctccgatctggcacaaagtgttggcattaatgaacttgctgagagcatgatgtcttttaacaccaactataaggatactggtttgttcggcgtgtatgctgttgcaaagcctgattgtttgagtgatttgtcctactgcattatgcgcgagataagcaaattgtgctaccgggtttcggatgctgatgtgactcgtgcttgcaaccagttgaagtcttctctcatgctacacattgatggaactagtcctgttgctgaagacattgggcgtcagctactcacatatggcagaaggattccagctacagagctgtttgcaagggttgatgctgtggatgctagcaccatcaaacgagttgcaaacagatttatctttgaccaggatgttgctatatccgcgctggggcctatccagacactacctgattataactggttcagacgcagaacctacatgctccgttattagacgattcttttttttctttttttggagttgtaatgcatcacaattacacacctcgctcgaccattccaaacttggacatataggtcttacttttccaattcttcctcttgcctactttctggttttgtaacggttttgtagcttttccctataaaataagcggcctatatttaataatttggttgttgacgtttgttttcatattctttgaaaaattgtactcgaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0025E22-LbUfe/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0025E22.1" temp_strand="-" temp_description="C02SLm0025E22.1  AC215476.1 htgs_phase:3 submitted_to_sgn_as:C02SLm0025E22 sequenced_by:kribb upload_account_name:korea">
        <position start="77008" stop="71200"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76708" g_stop="75927" g_length="782"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="782" r_length="782" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="75926" i_stop="75103" i_length="824">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="75102" g_stop="74938" g_length="165"/>
          <reference_exon_boundary r_type="cDNA" r_start="783" r_stop="947" r_length="165" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="74937" i_stop="74813" i_length="125">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="74812" g_stop="74675" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="948" r_stop="1085" r_length="138" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="74674" i_stop="74586" i_length="89">
            <donor d_prob="0.923" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="74585" g_stop="74434" g_length="152"/>
          <reference_exon_boundary r_type="cDNA" r_start="1086" r_stop="1237" r_length="152" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="74433" i_stop="74339" i_length="95">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="74338" g_stop="74225" g_length="114"/>
          <reference_exon_boundary r_type="cDNA" r_start="1238" r_stop="1346" r_length="109" r_score="0.956"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="74224" i_stop="73339" i_length="886">
            <donor d_prob="0.984" d_score="0.94"/>
            <acceptor a_prob="0.973" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="73338" g_stop="73240" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="1347" r_stop="1445" r_length="99" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="73239" i_stop="73149" i_length="91">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.969" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="73148" g_stop="73083" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="1446" r_stop="1511" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="73082" i_stop="72027" i_length="1056">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.933" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="72026" g_stop="71919" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="1512" r_stop="1619" r_length="108" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="71918" i_stop="71802" i_length="117">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="71801" g_stop="71475" g_length="327"/>
          <reference_exon_boundary r_type="cDNA" r_start="1620" r_stop="1944" r_length="325" r_score="0.972"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0025E22.1" gen_strand="-" ref_id="SGN-U580309" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>1951</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0025E22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U580309" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76708" e_stop="75927"/>
          <exon e_start="75102" e_stop="74938"/>
          <exon e_start="74812" e_stop="74675"/>
          <exon e_start="74585" e_stop="74434"/>
          <exon e_start="74338" e_stop="74225"/>
          <exon e_start="73338" e_stop="73240"/>
          <exon e_start="73148" e_stop="73083"/>
          <exon e_start="72026" e_stop="71919"/>
          <exon e_start="71801" e_stop="71475"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGCTTTCTTAGTCGACCAGAGCGTGCTTCTTGATTTTCTTGAGCTTCGTTCCCATTTCCCTCTTTCTCTGTATAGGAACCACAACAAACCCTAGCCTAATTTACAAGCCATAGCCATGACGATCCGGCAGCTCTTAACCCTAGCCCGCCGGTCCCGAAACCTATCCTCATCCCATTCACTGCGGCGTCTTTCTTCGGCGTCTGCCGCCGTCGCCGCCACATCCTCCTCCGCCCCGGCCATCGGTCCGCCACCCCCAGATGCAATGATCTACGATCGATTGGCTGAAGACGTTAAACGAAAGATCAAGAGACTCGAGAATCCTGATTCCCGATTCCTTCAGTACAACTCGCCACACCCAACTTTAGCCGACCACACATCAATCCTCAGCTTCCCCTCTACGCGCGTGACTACACTACCATCGGGCCTGCGTGTGGCCACGGAGACTAATCTCGCTGTCAAGACTGCCACCGTTGGGGTATTCATTGATGCAGGGTCAAGGTTTGAGACCGATGAGACTAATGGAACAGCTCATTTTCTTGAGCATATGATCTTTAAGGGTACTGAAAAGAGGACTTCTTGGGAAATGGAGGAGGAGATTGAGAATATGGGTGGACATTTGAATGCATATACTTCCAGGGAGCAAACAGCATACTATGCTAAAGTGTTGGATAATGACGTCCCTGTAGCTTTGGATATTTTGGCTGATATACTTCAGAATTCTAAGTTCGAAGAGAAAAAGATTGAACGTGAACGTGATGTCATCCTCAGGGAGATGGAGGAGGTGCACTTTTTTTCTCTATTCTTTGATCTCTGAATATCAAGTTTGCTGTTTTTTCGATCTTTGTCAATGAGCTGCAATAACCCTACGTTATATTCTACTAGTCTCTGCATGCACTTGAAGCTTAACTAGTAAGCTGGTCACTAAAAACTAATTGGCATATTCATGTCAATTGACTAGTTTTACACTGACCGCCAACCTTGCAACCCTCATTACCCTCACGTAGGGTAAGAACTTGCTCTAACCCCAGTTCTGAAATTCAAGATCACTTGCGTTCTTGTTGAGTTCCCTGGATGCTAACAGGTTTTAACTTTACTGTTTCTTCGTTTTTCTTTTACTTCCATTTAAAATTACCTCTAGCTTCTTCAGTTTTATGAAAGTATACAGTCCATAGTATTTGAGTACTGTTGCAGAGAACTTTCAAAAGTAAATCTAATTGTATTATTTAGATTCAAAGAAATATCTGAATCCAATGAAACATAGGTAGATGTTGAAATGGTTTACTGATTAATATCCTAAGATTTTATTGAGGATTATTGTGCTTCAGGGAGTTGCCCTTGTTGATACAATGTAGTATTAAGTACTAACCGCTATGTATCCTCATTATTTGAGAGATTAAGAGCCATAATGAAGGAAATGAAATGGCCGTGCATTAAGTTTGTGATTGACCTTACAAAGAGAAGACGTTCCTCTCTAGAGAAACAGAAGAGAGGGAACTCCACACAATCCAAAAAGTTACTCCTGTAGTGAGCTTATGAAACCTATCATGCTGCCTGTATCATATACAATCTGAAAATTAGCAATCCATTATAACTATCTGTTTGCAGGTCGAAGGTCAAACAGAGGAAGTCATCTTTGACCACTTGCATTCAACTGCATTCCAGTACTCACCTTTGGGTAGGACTATTCTTGGACCTGCCCAGAATATAAAGACAATCACCAGAAGTCATCTGAAGGACTACATATCAACACATTATACCGCTCCCAGAATGGTATTTAGAAATGATTTCATCTTCTTTTTCTTAGTCTGTCTTGCTTGTTAGCTCAAACTTGATTCTTCAAGTATTATCATAATCTGCTGTATTAACTCTAGCCTTTCCCGTGGACATTAAAATAGGTAATTGTTGCTTCTGGGCCTGTTAAACATGAAGAATTTGTTGAGCAAGTTAAGAAACAGTTTACTAAACTTTCAACCAATCCGAGTACGGCCTCAGAATTGGTTGCCAGAGAACCAGCAATTTTTACAGGTTCAGAGGTATGCCTATCTTATCAGGGTTCGTTACGCCTTCACGGTGCTTTTTTCAGTAGAATAAGTTCTTATGCTGATCATTTTACCAAAATCAGGTTAGGGTAATTGATGATGACATTCCATTGGCACAATTTGCTGTTGCTTTTCAAGGGGCACCGTGGACTGATCCAGATGCCATTCCACTGATGGTAATGCAATCCATGCTGGGCACTTGGAATAAAAATGCCGGAGGAGGGAAACACATGGGGTGAGTGTATCACTAGTTCTTTTACAATTTATGTCATCGCAAGCATGTCAATGGATCTGTCTCATGTTTTTATGGGACTTCCTAATCATTTGCAGCTCCGATCTGGCACAAAGTGTTGGCATTAATGAACTTGCTGAGAGCCATGATGTCTTTTTAACACCAACTATAAGGATACTGGTTTGTTCCGGCGTGGTATGCTGTTGCAAAAGGTACAAATCTTTAACACCTAAGAGTTCCTTCTACCTGGAGAGAATGTAGTATGATGATGCATTACCTTATTTTCTTCGCATTTTCTTCCATCAAATAAAATTTGTTTTGTTTTTCTTTTTTAATGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGACAGAGATAGATAGATAGAGAGAGAGAGAGAGTCTGAGAGGGGTGGATCTGTTGGTTAGCTGAACAGCTGCTATAAATGCAAGCTCTTGCTCGGCTGATTGGAGTATTAGAGTTTGATGTAAAGGTTTTAATGCACCACATCTTCTATCGTGGGGTTTATGTAAAATGTACGTTTTATCCTTCAGCTTGTTTTTGTTTTCATTATGATTAAAATGTAGTCTAGATTCTTGAATATGCTTAAAAAGTATTCTAAGTGTTTATTGGTTGTATATTGAATGCGGAGTGAAGTAGTTCTTTTTCAATGTCATCTACTGCTCATGTTTTGGATAGATGTAGTTCATATATTATTAGACAAGGTGTTACTCATCTGCTTGGATTTTTTGAGATATTGTGGTTAGTGTAAACTGAGTAATTTTATTTATTTGTTCTTAAAAGAAGCAGATCTTTTCTCTAATGACCAAAAAAAGACGGTTAGGTGTTGGTATTGTGACCCTTTTGACTGGCATGTGGTTGTAAATAATTCTACTATATATTAGGCAAGGTAGTTCTTATCTTCTTGGATTTTTTGAGATAATTTGGTTAGTAAAGTGAGCAATTTTTTTATTTGTTCTTAAAAGAAACATTTTTTTTCTCTAAAGACAAAATTAATATGATTAGGTGTTGTATTACCATCCTTTTTATGGTTGTGAATAATCCTTGTTTTATCTTAAATGAATTCTTAATGTGCAGCCTGATTGTTTGAGTGATTTGTCCTACTGCATTATGCGCGAGATAAGCAAATTGTGCTACCGGGTTTCGGATGCTGATGTGACTCGTGCTTGCAACCAGGTTTGTGTTACTTAATGTTAAACAGTCTGGCTAGTTGTTATTACTCCTTGCTGTTTTTCTTTGTTTCTCTCTAACCAATATCGGTTTGCAGTTGAAGTCTTCTCTCATGCTACACATTGATGGAACTAGTCCTGTTGCTGAAGACATTGGGCGTCAGGTACTATTCTGATATCCGATTCTGTGGTTGTACACATGTGTTTTGTCATGATTGTAATTAGTATTTTCTCATTAAGTTTATTCCTTGTAATTTCGGGGAGAAGTGGTGGGATTGGGTGGTATCATAGATAAGACGCTGCAAATGTAACTTAATTCCTTCTCTCACGGTATTAGTTTCCAGAAGAATGTTCTGGACACCTACATATATGTGCATAAAAGGGACACTGAACTGCTTCATGTACTTGAATCATTCCATGACCATAAACATTCTGAAGTAGAAGCTATAATAGTATCGAAGAGGATATTTTAGGAACTTTGTTACTCTTGGAGCAGTTTTAGTTAAACCGTGCCTAAGCCTACTAATGGCACTTCCCTACCCTAGATGATGACGATAGTTTGGTCCATTATTGCATATAGATTCTGAATTTCAAGATTTCACGATGCCTGAATAATCCTCTTCACCACTATAACAGCTTCTACTACCAATATTACTGCAACTAAATATAAACACGTGTTAGCCATATCAGCAGCAATTCACTGACACATTCCGTATTTGGTTCATTAAGTTCATTTTTGTTAGAGGTAGTGTAACTTGGTGGTGCAGTACAACATCAAGTAGCAGCCTAATTATGCATGCTTAATGTCTGAATAGATTAGAACAAAATGAATGCTGAAAGGTGTTGCTGCCAGCTGGTTGGTAAAAATAGCCCTTAACAGACCTTATAAGAAGAAAAATTGGAAAACAAAAAAGAACAGCTCTTAAACCGCAGTACCTTTGCTCATGTTGAGTTAAGAAAAAACTCTAATGTGAAGAGCCAAATGATCAAAGTTTTGCTGACAAGTTTTGAGTGTGTCATCAAGTATTTGTGTTTTTGCATGTCAAGCGTACTGCAACATCTGCTTGTAAGTGGAGAACATAGGTTGATAGCCCCCCCCTCCCCCCCTCCCCCCCTCTCCCTCCTTTCCAATATGTGGAAAAATTGTATTTTATGTAAGCTTGACTTCGTTAGGATGGGATCCAGTGATTATTTGTAAACTAAGATCATCCTGCTTGCAGCTACTCACATATGGCAGAAGGATTCCAGCTACAGAGCTGTTTGCAAGGGTTGATGCTGTGGATGCTAGCACCATCAAACGAGTTGCAAACAGATTTATCTTTGACCAGGTAGGATTCAAAAATATTTGAGACATGGGAGTTCATTGCTATGAAACAATCTTGTTCACTCAACTTTCCTTTATCTTATTTTCTGAGTTTAAACCAAAATTTTCTTCCTTCTGGCAGGATGTTGCTATATCCGCGCTGGGGCCTATCCAGACACTACCTGATTATAACTGGTTCAGACGCAGAACCTACATGCTCCGTTATTAGACGATTCTTTTTTTTCTTTTTTTGGAGTTGTAATGCATCACAATTACACACCTCGCTCGACCATTCCAAACTTGGACATATAGGTCTTACTTTTCCAATTCTTCCTCTTGCCTACTTTCTGGTTTTGTAACGGTTTTGTAGCTTTTCCCTATAAAATAAGCGGCCTATATTTAATAATTTGGTTGTTGACGTTTGTTTTCATATTCTTTGAAAAAAATTGTACTCGTACATGCAAATTAA</genome_strand>
        <mrna_strand>AAGCTTTCTTAGTCGACCAGAGCGTGCTTCTTGATTTTCTTGAGCTTCGTTCCCATTTCCCTCTTTCTCTGTATAGGAACCACAACAAACCCTAGCCTAATTTACAAGCCATAGCCATGACGATCCGGCAGCTCTTAACCCTAGCCCGCCGGTCCCGAAACCTATCCTCATCCCATTCACTGCGGCGTCTTTCTTCGGCGTCTGCCGCCGTCGCCGCCACATCCTCCTCCGCCCCGGCCATCGGTCCGCCACCCCCAGATGCAATGATCTACGATCGATTGGCTGAAGACGTTAAACGAAAGATCAAGAGACTCGAGAATCCTGATTCCCGATTCCTTCAGTACAACTCGCCACACCCAACTTTAGCCGACCACACATCAATCCTCAGCTTCCCCTCTACGCGCGTGACTACACTACCATCGGGCCTGCGTGTGGCCACGGAGACTAATCTCGCTGTCAAGACTGCCACCGTTGGGGTATTCATTGATGCAGGGTCAAGGTTTGAGACCGATGAGACTAATGGAACAGCTCATTTTCTTGAGCATATGATCTTTAAGGGTACTGAAAAGAGGACTTCTTGGGAAATGGAGGAGGAGATTGAGAATATGGGTGGACATTTGAATGCATATACTTCCAGGGAGCAAACAGCATACTATGCTAAAGTGTTGGATAATGACGTCCCTGTAGCTTTGGATATTTTGGCTGATATACTTCAGAATTCTAAGTTCGAAGAGAAAAAGATTGAACGTGAACGTGATGTCATCCTCAGGGAGATGGAGGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGAAGGTCAAACAGAGGAAGTCATCTTTGACCACTTGCATTCAACTGCATTCCAGTACTCACCTTTGGGTAGGACTATTCTTGGACCTGCCCAGAATATAAAGACAATCACCAGAAGTCATCTGAAGGACTACATATCAACACATTATACCGCTCCCAGAATG.............................................................................................................................GTAATTGTTGCTTCTGGGCCTGTTAAACATGAAGAATTTGTTGAGCAAGTTAAGAAACAGTTTACTAAACTTTCAACCAATCCGAGTACGGCCTCAGAATTGGTTGCCAGAGAACCAGCAATTTTTACAGGTTCAGAG.........................................................................................GTTAGGGTAATTGATGATGACATTCCATTGGCACAATTTGCTGTTGCTTTTCAAGGGGCACCGTGGACTGATCCAGATGCCATTCCACTGATGGTAATGCAATCCATGCTGGGCACTTGGAATAAAAATGCCGGAGGAGGGAAACACATGGG...............................................................................................CTCCGATCTGGCACAAAGTGTTGGCATTAATGAACTTGCTGAGAG-CATGATGTC-TTTTAACACCAACTATAAGGATACTGGTTTGTT-CGGCGT-GTATGCTGTTGC-AAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTGATTGTTTGAGTGATTTGTCCTACTGCATTATGCGCGAGATAAGCAAATTGTGCTACCGGGTTTCGGATGCTGATGTGACTCGTGCTTGCAACCAG...........................................................................................TTGAAGTCTTCTCTCATGCTACACATTGATGGAACTAGTCCTGTTGCTGAAGACATTGGGCGTCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACTCACATATGGCAGAAGGATTCCAGCTACAGAGCTGTTTGCAAGGGTTGATGCTGTGGATGCTAGCACCATCAAACGAGTTGCAAACAGATTTATCTTTGACCAG.....................................................................................................................GATGTTGCTATATCCGCGCTGGGGCCTATCCAGACACTACCTGATTATAACTGGTTCAGACGCAGAACCTACATGCTCCGTTATTAGACGATTCTTTTTTTTCTTTTTTTGGAGTTGTAATGCATCACAATTACACACCTCGCTCGACCATTCCAAACTTGGACATATAGGTCTTACTTTTCCAATTCTTCCTCTTGCCTACTTTCTGGTTTTGTAACGGTTTTGTAGCTTTTCCCTATAAAATAAGCGGCCTATATTTAATAATTTGGTTGTTGACGTTTGTTTTCATATTCTTTG--AAAAATTGTACTCGAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0025E22-LbUfe/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U594760" ref_strand="+" ref_description="SGN-U594760 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|39939262|gb|AAR32717.1| (e_value=4e-22) UDP-glucose dehydrogenase [Populus tomentosa]; (*ATH) AT3G29360.2 (e_value=7e-23)  Symbol: None | similar to UDP-glucose 6-dehydrogenase, putative [Arabidopsis thaliana] (TAIR:At1g26570.1); similar to UDP-glucose 6-dehydrogenase, putative [Arabidopsis thaliana] (TAIR:At5g39320.1); similar to UDP-glucose 6-dehydrogenase, putative [... ; (*SWP) sp|Q96558|UGDH_SOYBN (e_value=4e-22) UDP-glucose 6-dehydrogenase OS=Glycine max; ">
      <seq>gcttgatttccagaagatatatgataacatgcaaaaacccgcttttgtttttgatggcaggaatgttgtgaatgctgaaaagctaagagagattgggtttatcgtctactcaattggtaagcctctcgatgcctggcttaaggacatgcctgctgtcgcttaagagccttacattgctcgagtgacttgttttggtcttaaagatattagttatcagacaatcatcagctgggattctttactattttttttaccacttcaatttctgtttccattttatccattgtagtcataagaccaccatcgtcactatcttgagtcacatgtaagatgttttctgtttcttttgtattgatgatacttgtttttatcatttacttgtcatgtcggaggatttatttgttcgattatgaagggtatttaagttttgaactagtttttttcttaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0025E22-LbUfe/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0025E22.1" temp_strand="+" temp_description="C02SLm0025E22.1  AC215476.1 htgs_phase:3 submitted_to_sgn_as:C02SLm0025E22 sequenced_by:kribb upload_account_name:korea">
        <position start="86705" stop="87749"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="87004" g_stop="87452" g_length="449"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="449" r_length="449" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0025E22.1" gen_strand="+" ref_id="SGN-U594760" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>449</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0025E22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U594760" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="87004" e_stop="87452"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTTGATTTCCAGAAGATATATGATAACATGCAAAAACCCGCTTTTGTTTTTGATGGCAGGAATGTTGTGAATGCTGAAAAGCTAAGAGAGATTGGGTTTATCGTCTACTCAATTGGTAAGCCTCTCGATGCCTGGCTTAAGGACATGCCTGCTGTCGCTTAAGAGCCTTACATTGCTCGAGTGACTTGTTTTGGTCTTAAAGATATTAGTTATCAGACAATCATCAGCTGGGATTCTTTACTATTTTTTTTACCACTTCAATTTCTGTTTCCATTTTATCCATTGTAGTCATAAGACCACCATCGTCACTATCTTGAGTCACATGTAAGATGTTTTCTGTTTCTTTTGTATTGATGATACTTGTTTTTATCATTTACTTGTCATGTCGGAGGATTTATTTGTTCGATTATGAAGGGTATTTAAGTTTTGAACTAGTTTTTTTCTTCCT</genome_strand>
        <mrna_strand>GCTTGATTTCCAGAAGATATATGATAACATGCAAAAACCCGCTTTTGTTTTTGATGGCAGGAATGTTGTGAATGCTGAAAAGCTAAGAGAGATTGGGTTTATCGTCTACTCAATTGGTAAGCCTCTCGATGCCTGGCTTAAGGACATGCCTGCTGTCGCTTAAGAGCCTTACATTGCTCGAGTGACTTGTTTTGGTCTTAAAGATATTAGTTATCAGACAATCATCAGCTGGGATTCTTTACTATTTTTTTTACCACTTCAATTTCTGTTTCCATTTTATCCATTGTAGTCATAAGACCACCATCGTCACTATCTTGAGTCACATGTAAGATGTTTTCTGTTTCTTTTGTATTGATGATACTTGTTTTTATCATTTACTTGTCATGTCGGAGGATTTATTTGTTCGATTATGAAGGGTATTTAAGTTTTGAACTAGTTTTTTTCTTAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0025E22-LbUfe/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U573942" ref_strand="+" ref_description="SGN-U573942 Tomato 200607#2 [2 ESTs aligned] (*GB) gi|157345755|emb|CAO15053.1| (e_value=9e-24) unnamed; (*ATH) AT3G29310.1 (e_value=7e-24) | Symbol: None | calmodulin-binding protein-related | chr3:11250889-11253057 FORWARD | Aliases: MUO10.1; ">
      <seq>gccaccatctgttactgctactcttgtcaccccaccccctcatcataccctccacccctaaatccacactctactcccccttatacccactacccctctccacagcctcatttctgtacttcccatctggtcccaccaccaccatcgccgccgccttctcatatccaatgccaatgtgaaaccgttcaccaaaatcatcatcattttcaagaattgaatcatcaagccaacaaagtaacagaccaacaaacccaacgaattgttacatctcttctccgtcggatcgctgccttagaatcttctctcagccggagctcctctacttcttctgtttcttctcgttctcgtcaaacgttacgcgatgctgcagcgcgtactattcagacccatttcagagccttccttgctcgtagatcgagaacacttcgacagctgaagcagttggcttccatcaaaacaactctctatgttctcaaatcgtcagtttctggtaaaatacacattgatattcgagctgttactcgcagagcgacggatttactcgttagacttgattgtattgagggcgatgatccgttaatcagagatggtagaaggtcaataagcaacgaactgactcgatttatgaaggtgattaatggggtttccatattctcaagtagagtagttaagaaagtgagaggtggaaacaaagctagggtcttttccggtgaccgtaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0025E22-LbUfe/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0025E22.1" temp_strand="+" temp_description="C02SLm0025E22.1  AC215476.1 htgs_phase:3 submitted_to_sgn_as:C02SLm0025E22 sequenced_by:kribb upload_account_name:korea">
        <position start="90953" stop="92361"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="91252" g_stop="91815" g_length="564"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="564" r_length="564" r_score="0.998"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="91816" i_stop="91906" i_length="91">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="91907" g_stop="92061" g_length="155"/>
          <reference_exon_boundary r_type="cDNA" r_start="565" r_stop="719" r_length="155" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0025E22.1" gen_strand="+" ref_id="SGN-U573942" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>719</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0025E22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U573942" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="91252" e_stop="91815"/>
          <exon e_start="91907" e_stop="92061"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACCACCATCTGTTACTGCTACTCTTGTCACCCCACCCCCTCATCATACCCTCCACCCCTAAATCCACACTCTACTCCCCCTTATACCCACTACCCCTCTCCACAGCCTCATTTCTGTACTTCCCATCTGGTCCCACCACCACCATCGCCGCCGCCTTCTCATATCCAATGCCAATGTGAAACCGTTCACCAAAATCATCATCATTTTCAAGAATTGAATCATCAAGCCAACAAAGTAACAGACCAACAAACCCAACGAATTGTTACATCTCTTCTCCGTCGGATCGCTGCCTTAGAATCTTCTCTCAGCCGGAGCTCCTCTACTTCTTCTGTTTCTTCTCGTTCTCGTCAAACGTTACGCGATGCTGCAGCGCGTACTATTCAGACCCATTTCAGAGCCTTCCTTGCTCGTAGATCGAGAACACTTCGACAGCTGAAGCAGTTGGCTTCCATCAAAACAACTCTCTATGTTCTCAAATCGTCAGTTTCTGGTAAAATACACATTGATATTCGAGCTGTTACTCGCAGAGCGACGGATTTACTCGTTAGACTTGATTGTATTGAGGTAATTGAACTCTAATTGCAATTATACGCTTGTTATAATAACCCTAGCGTATTGGGGAAATGTTGAAAAAGGGGTTCTTTTTTTTTTGTAGGGCGATGATCCGTTAATCAGAGATGGTAGAAGGTCAATAAGCAACGAACTGACTCGATTTATGAAGGTGATTAATGGGGTTTCCATATTCTCAAGTAGAGTAGTTAAGAATGTGAGAGGTGGAAACAAAGCTAGGGTCTTTTCCGGTGACCGTAA</genome_strand>
        <mrna_strand>GCCACCATCTGTTACTGCTACTCTTGTCACCCCACCCCCTCATCATACCCTCCACCCCTAAATCCACACTCTACTCCCCCTTATACCCACTACCCCTCTCCACAGCCTCATTTCTGTACTTCCCATCTGGTCCCACCACCACCATCGCCGCCGCCTTCTCATATCCAATGCCAATGTGAAACCGTTCACCAAAATCATCATCATTTTCAAGAATTGAATCATCAAGCCAACAAAGTAACAGACCAACAAACCCAACGAATTGTTACATCTCTTCTCCGTCGGATCGCTGCCTTAGAATCTTCTCTCAGCCGGAGCTCCTCTACTTCTTCTGTTTCTTCTCGTTCTCGTCAAACGTTACGCGATGCTGCAGCGCGTACTATTCAGACCCATTTCAGAGCCTTCCTTGCTCGTAGATCGAGAACACTTCGACAGCTGAAGCAGTTGGCTTCCATCAAAACAACTCTCTATGTTCTCAAATCGTCAGTTTCTGGTAAAATACACATTGATATTCGAGCTGTTACTCGCAGAGCGACGGATTTACTCGTTAGACTTGATTGTATTGAG...........................................................................................GGCGATGATCCGTTAATCAGAGATGGTAGAAGGTCAATAAGCAACGAACTGACTCGATTTATGAAGGTGATTAATGGGGTTTCCATATTCTCAAGTAGAGTAGTTAAGAAAGTGAGAGGTGGAAACAAAGCTAGGGTCTTTTCCGGTGACCGTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0025E22-LbUfe/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U584521" ref_strand="+" ref_description="SGN-U584521 Tomato 200607#2 [2 ESTs aligned] ">
      <seq>gctgagaagtatgatttattccacaagttcaaatgacactacactctccaagaaatagccacctgttaatttatgttgaataaaatgtgacagacatctttcaactcttcaacaatcattcatttaagaccactgaataagggtccattacacccaaaagatctcccatccataaccacaatgacagaagaaaacatctaaatttagtacttcaaaacaggtgaactctccctatcaaacttaacaatactcatctagacaatcattactaacaattacaaacaattcgaaataacggcagaagcctaacttccacctaattgttaatgctcaacaggacctgtaggagagcaaagttcaaatcttgatcttgttgggaacctattcaattgtccactattttgacaccctttttcctgttgatataatcagcagctctagcttccatcttcacaggcattggtgctgagaacacggaactctcattttcgtgctcattatcattctcatctctcacattcctttcataatacccatcctttcttgaaatgtaatttggatccatttcattatcactacttccactataccctccatcttcttccccatcaccttcacaccccttggatgccatgccaagctttttcactcttttgctaaagttttttatcagctctttctcagtatcaaaagtttcttgctctttaacattccccattg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0025E22-LbUfe/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0025E22.1" temp_strand="-" temp_description="C02SLm0025E22.1  AC215476.1 htgs_phase:3 submitted_to_sgn_as:C02SLm0025E22 sequenced_by:kribb upload_account_name:korea">
        <position start="93341" stop="92022"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="93041" g_stop="92322" g_length="720"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="720" r_length="720" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0025E22.1" gen_strand="-" ref_id="SGN-U584521" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>720</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0025E22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U584521" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="93041" e_stop="92322"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTGAGAAGTATGATTTATTCCACAAGTTCAAATGACACTACACTCTCCAAGAAATAGCCACCTGTTAATTTATGTTGAATAAAATGTGACAGACATCTTTCAACTCTTCAACAATCATTCATTTAAGACCACTGAATAAGGGTCCATTACACCCAAAAGATCTCCCATCCATAACCACAATGACAGAAGAAAACATCTAAATTTAGTACTTCAAAACAGGTGAACTCTCCCTATCAAACTTAACAATACTCATCTAGACAATCATTACTAACAATTACAAACAATTCGAAATAACGGCAGAAGCCTAACTTCCACCTAATTGTTAATGCTCAACAGGACCTGTAGGAGAGCAAAGTTCAAATCTTGATCTTGTTGGGAACCTATTCAATTGTCCACTATTTTGACACCCTTTTTCCTGTTGATATAATCAGCAGCTCTAGCTTCCATCTTCACAGGCATTGGTGCTGAGAACACGGAACTCTCATTTTCGTGCTCATTATCATTCTCATCTCTCACATTCCTTTCATAATACCCATCCTTTCTTGAAATGTAATTTGGATCCATTTCATTATCACTACTTCCACTATACCCTCCATCTTCTTCCCCATCACCTTCACACCCCTTGGATGCCATGCCAAGCTTTTCAACTCTTTTGCTAAGGTTTTTTATCAGCTCTTTCTCAGTATCAAAAGTTTCTTGCTCATTAACATTCCCCATTG</genome_strand>
        <mrna_strand>GCTGAGAAGTATGATTTATTCCACAAGTTCAAATGACACTACACTCTCCAAGAAATAGCCACCTGTTAATTTATGTTGAATAAAATGTGACAGACATCTTTCAACTCTTCAACAATCATTCATTTAAGACCACTGAATAAGGGTCCATTACACCCAAAAGATCTCCCATCCATAACCACAATGACAGAAGAAAACATCTAAATTTAGTACTTCAAAACAGGTGAACTCTCCCTATCAAACTTAACAATACTCATCTAGACAATCATTACTAACAATTACAAACAATTCGAAATAACGGCAGAAGCCTAACTTCCACCTAATTGTTAATGCTCAACAGGACCTGTAGGAGAGCAAAGTTCAAATCTTGATCTTGTTGGGAACCTATTCAATTGTCCACTATTTTGACACCCTTTTTCCTGTTGATATAATCAGCAGCTCTAGCTTCCATCTTCACAGGCATTGGTGCTGAGAACACGGAACTCTCATTTTCGTGCTCATTATCATTCTCATCTCTCACATTCCTTTCATAATACCCATCCTTTCTTGAAATGTAATTTGGATCCATTTCATTATCACTACTTCCACTATACCCTCCATCTTCTTCCCCATCACCTTCACACCCCTTGGATGCCATGCCAAGCTTTTTCACTCTTTTGCTAAAGTTTTTTATCAGCTCTTTCTCAGTATCAAAAGTTTCTTGCTCTTTAACATTCCCCATTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0025E22-LbUfe/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U573429" ref_strand="+" ref_description="SGN-U573429 Tomato 200607#2 [3 ESTs aligned] (*GB) gi|157345752|emb|CAO15050.1| (e_value=9e-105) unnamed; (*ATH) AT5G15470.1 (e_value=3e-104) | Symbol: None | glycosyl transferase family 8 protein, contains Pfam profile: PF01501 glycosyl transferase family 8 | chr5:5021013-5024745 REVERSE | Aliases: T20K14.80, T20K14_80; (*SWP) sp|Q9LSG3|QUA1_ARATH (e_value=4e-16) Glycosyltransferase QUASIMODO1 OS=Arabidopsis thaliana GN=QUA1; ">
      <seq>gaggccttgaaggtgtcaacaagtgctcttccattgattgtttaggtagacgattaggaccatcacttttaggacgaactgatgatacagggaagctggtcaaggattttgttaagatcctcaatcaagtgaacactgaagaagtgcctgatggcctgaagctcccagagtcctttagtcaacttgttgctgaaatgaaaaacaacaagtacagtgcaaaagaatttgctttggttttaaagggaatgatggagaaatctgaaagagagattagggaatcaaagtttgcagagctgacaaataaacactttgctgcaagtgcaattcccaaaggcattcattgtctttcgctgcggttgactgatgagtactccacaaatgctcatgcacgcagacagttgccttcaccagagctactccctctgctatctgacaattcattgcaacactttgtagtggccactgacaacatcctggctgcctcagttgtggtcaattctgctgtgcagtcaactctgaagcctgaaaagattgttttccatgtcatcaccgacaagaaaacgtatgcaggcatgcactcatggtttgctctgaatcctgtcactccagctcttgtggaggttaaaggtgttcatcagtttgactggttgactagagaaaatgttcccgtgcttgaaccagtcgagagccataatgttattcgtaaatactaccatggaaatcatgttacaggtgccaatctcagtgaaaaaactccgcgatcttttgcatcaaagttgcaggctagaaacccaaagtatatctctttggctgaatcatcttcccataaatttgccagaggt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0025E22-LbUfe/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0025E22.1" temp_strand="+" temp_description="C02SLm0025E22.1  AC215476.1 htgs_phase:3 submitted_to_sgn_as:C02SLm0025E22 sequenced_by:kribb upload_account_name:korea">
        <position start="105972" stop="108719"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="106268" g_stop="106303" g_length="36"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="36" r_length="36" r_score="0.889"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="106304" i_stop="107289" i_length="986">
            <donor d_prob="1.000" d_score="0.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="107290" g_stop="107345" g_length="56"/>
          <reference_exon_boundary r_type="cDNA" r_start="37" r_stop="92" r_length="56" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="107346" i_stop="107468" i_length="123">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="107469" g_stop="107624" g_length="156"/>
          <reference_exon_boundary r_type="cDNA" r_start="93" r_stop="248" r_length="156" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="107625" i_stop="107826" i_length="202">
            <donor d_prob="0.952" d_score="1.00"/>
            <acceptor a_prob="0.980" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="107827" g_stop="108419" g_length="593"/>
          <reference_exon_boundary r_type="cDNA" r_start="249" r_stop="842" r_length="594" r_score="0.985"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0025E22.1" gen_strand="+" ref_id="SGN-U573429" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>841</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0025E22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U573429" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="106268" e_stop="106303"/>
          <exon e_start="107290" e_stop="107345"/>
          <exon e_start="107469" e_stop="107624"/>
          <exon e_start="107827" e_stop="108419"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTACCCTTGAAGGTGTCAACAAGTGCTCTTCCATTGGTAAGTTTTCTTCTATCGGATTTTTCATTTGATTAATCTTCCTAGATCCTGATGTGAATCTATGCATATTTGATGTGGCAATGTTGCTAGTTTGTTTTCAGAATTTCTAAAATGTTGTTTGAGTTGAATTGGAAATTATTGTTTTCCACTGTAGCTAGAAATGCCATTGGAGGCGTTTTTGTATCTTAGGATTGTGTGGAATTACGGGAAAGTTAAGGCTTAAACTTATTTGTCTTTCAATAACTTGTCCCAAGGATTTGAATTTGATGACAAACACAAAAAAGGAAACAAGCAATAGAGTGGTAAATGGTTTATGATTTGTTTTTTTTGGGTATACTTTACTTTTTAAAATTTTTTTACTCTATGCTGCTCCACCATTCAAATTAAGAAATTGTTAATGCGTTTGTCTTCCACTTTAGGAATCAAATGTGATTAAATTCAAAATATAGATGTCTGAGTGCATTGCTTTTGTGGAGGTGGGGGGTTGCATAGTGTTGTTTCTGGAGATGTGCATGAATGGTATTTAGTAACTGCTTCTCATGTTTGCTGCTTACTCTACCACTTATCTTAAGTATGCAACAAACTCCCAATTGACATACTTGAGTCCAGTTGATGTTGTTCATTTCTTATGGGTGTTGCATTAAGCTATCTTTAGTTCTTTGGGAATCACGTGCACCGATCACATCTCTTAGTTGTTTTTGGATGCCTTCAAATGCTTTTTTTTAAAATTCCGTGGGATGAAAAGGAAGCTTCCTTGGTGGGACCCTTTTTTGCTTTATGGATGGAAATTCTTTTGAAGTATCAATATGCCAAGAAGCTTGTTTGGTCCGGTGGTGTTGGTCCTGGTTGTGATGCTTCTAGTTGGCATTACCTTTTGTCACCCATTTTACTTTAGAATGTTGTTGGATATGAGGGATACCTTTCATCATTATTATCCTTTTTTTTTTTGCTTAACTTTAATTTCATTTTCTTCTCCTCGGTTTCAGATTGTTTAGGTAGACGATTAGGACCATCACTTTTAGGACGAACTGATGATACAGGGGTAAGTAAGCTTCATTCTACATTCTCTTATTGTCATTTCTCTCCAATCTTGTGTAAACTTTTACATGGAATTCCTTTTCTAACCCAAGTCTATGCCGTTGTTTGTCTATTGCTGTTTTGGCAGAAGCTGGTCAAGGATTTTGTTAAGATCCTCAATCAAGTGAACACTGAAGAAGTGCCTGATGGCCTGAAGCTCCCAGAGTCCTTTAGTCAACTTGTTGCTGAAATGAAAAACAACAAGTACAGTGCAAAAGAATTTGCTTTGGTTTTAAAGGGAATGGTATGTGCATGTCATTCTTTTCTAGCCTTTTTATTATTGCATGTCTATTAGCCTTATTTGTTCTTGCCTTTCCCTTGGACTTTCTACCATTTGCCCAGGGTTTTTGAGTTACTTACTGACCCCCACATTGGTTTTATTTGCACACAGACACAGAAAGATATTGTCCTCAGCTGAACTTCATGTTGAATTTGCTATTTTGCAGATGGAGAAATCTGAAAGAGAGATTAGGGAATCAAAGTTTGCAGAGCTGACAAATAAACACTTTGCTGCAAGTGCAATTCCCAAAGGCATTCATTGTCTTTCGCTGCGGTTGACTGATGAGTACTCCACAAATGCTCATGCACGCAGACAGTTGCCTTCACCAGAGCTACTCCCTCTGCTATCTGACAATTCATTGCAACACTTTGTAGTGGCCACTGACAACATCCTGGCTGCCTCAGTTGTGGTCAATTCTGCTGTGCAGTCAACTCTGAAGCCTGAAAAGATTGTTTTCCATGTCATCACCGACAAGAAAACGTATGCAGGCATGCACTCATGGTTTGCTCTGAATCCTGTCACTCCAGCTCTTGTGGAGGTTAAAGGTGTTCATCAGTTTGACTGGTTGACTAGAGAAAATGTTCCCGTGCTTGAAGCAGTCGAGAGCCATAATGTTATTCGTAAATACTACCATGGAAATCATGTTACAGGTGCCAATCTCAGTGATACAACTCCGCGATCTTTTGCATCAAAGTTGCAGGCTAGAAGTCCAAAGTATATCTCTTT-GCTGAATCATCTTCGCATATATTTGCCAGAGGT</genome_strand>
        <mrna_strand>GAGGCCTTGAAGGTGTCAACAAGTGCTCTTCCATTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGTTTAGGTAGACGATTAGGACCATCACTTTTAGGACGAACTGATGATACAGGG...........................................................................................................................AAGCTGGTCAAGGATTTTGTTAAGATCCTCAATCAAGTGAACACTGAAGAAGTGCCTGATGGCCTGAAGCTCCCAGAGTCCTTTAGTCAACTTGTTGCTGAAATGAAAAACAACAAGTACAGTGCAAAAGAATTTGCTTTGGTTTTAAAGGGAATG..........................................................................................................................................................................................................ATGGAGAAATCTGAAAGAGAGATTAGGGAATCAAAGTTTGCAGAGCTGACAAATAAACACTTTGCTGCAAGTGCAATTCCCAAAGGCATTCATTGTCTTTCGCTGCGGTTGACTGATGAGTACTCCACAAATGCTCATGCACGCAGACAGTTGCCTTCACCAGAGCTACTCCCTCTGCTATCTGACAATTCATTGCAACACTTTGTAGTGGCCACTGACAACATCCTGGCTGCCTCAGTTGTGGTCAATTCTGCTGTGCAGTCAACTCTGAAGCCTGAAAAGATTGTTTTCCATGTCATCACCGACAAGAAAACGTATGCAGGCATGCACTCATGGTTTGCTCTGAATCCTGTCACTCCAGCTCTTGTGGAGGTTAAAGGTGTTCATCAGTTTGACTGGTTGACTAGAGAAAATGTTCCCGTGCTTGAACCAGTCGAGAGCCATAATGTTATTCGTAAATACTACCATGGAAATCATGTTACAGGTGCCAATCTCAGTGAAAAAACTCCGCGATCTTTTGCATCAAAGTTGCAGGCTAGAAACCCAAAGTATATCTCTTTGGCTGAATCATCTTCCCATAAATTTGCCAGAGGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0025E22-LbUfe/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U602446" ref_strand="+" ref_description="SGN-U602446 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|147819296|emb|CAN68963.1| (e_value=4e-25) hypothetical; (*ATH) AT3G01040.1 (e_value=4e-27) | Symbol: None | glycosyl transferase family 8 protein, contains Pfam profile: PF01501 glycosyl transferase family 8 | chr3:8964-12429 FORWARD | Aliases: T4P13.28, T4P13_28; ">
      <seq>gaaaactaatattacaaatacctatcatgcatggcttaaagagaatctgaagtcgaacttgacaatgtggaagcttgggacattacctcctgccttgattgcattcaagggtcatgttcaccccattgacgcctcgtggcacatgcttggcttgggatatcagagtaagacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0025E22-LbUfe/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0025E22.1" temp_strand="+" temp_description="C02SLm0025E22.1  AC215476.1 htgs_phase:3 submitted_to_sgn_as:C02SLm0025E22 sequenced_by:kribb upload_account_name:korea">
        <position start="109420" stop="110456"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="109720" g_stop="109762" g_length="43"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="43" r_length="43" r_score="0.977"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="109763" i_stop="110027" i_length="265">
            <donor d_prob="0.946" d_score="0.98"/>
            <acceptor a_prob="0.959" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="110028" g_stop="110156" g_length="129"/>
          <reference_exon_boundary r_type="cDNA" r_start="44" r_stop="172" r_length="129" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0025E22.1" gen_strand="+" ref_id="SGN-U602446" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>172</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0025E22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U602446" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="109720" e_stop="109762"/>
          <exon e_start="110028" e_stop="110156"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAAACGAATATTACAAATACCTATCATGCATGGCTTAAAGAGGTACTCAATCTTATGCTTTGTGATTATTTGGGGAAACAGTTGGTTTATCTAAATTCTAGCAGCTGTGTGTTTGCATTTTGGATCTTGCCAGTGTTGTGATTTTTCTGTCATTCCTGTTTGTGTTTGTCTCTTAGCTGTCCGTCCACCTTATTATTCATTTTTAGCTTTCTTTTTTTTTTGACATGTTAGTCTAGGAGGATTGTGTGACAAATTTAGCATTTTTAGATTCTGACTTTGACATTTTTAAACTCGCTTATCATTGTAGAATCTGAAGTCGAACTTGACAATGTGGAAGCTTGGGACATTACCTCCTGCTTTGATTGCATTCAAGGGTCATGTTCACCCCATTGACGCCTCGTGGCACATGCTTGGCTTGGGATATCAGAGTAAGACC</genome_strand>
        <mrna_strand>GAAAACTAATATTACAAATACCTATCATGCATGGCTTAAAGAG.........................................................................................................................................................................................................................................................................AATCTGAAGTCGAACTTGACAATGTGGAAGCTTGGGACATTACCTCCTGCCTTGATTGCATTCAAGGGTCATGTTCACCCCATTGACGCCTCGTGGCACATGCTTGGCTTGGGATATCAGAGTAAGACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0025E22-LbUfe/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U586015" ref_strand="+" ref_description="SGN-U586015 Tomato 200607#2 [11 ESTs aligned] ">
      <seq>taatcagtggatcggacgggctgcaggtgagcatctccgtcctttttggaccaagttcgttaacagctccaatgattttatcagtaattgccacatactggagtagtctacagattttccatcaaggaaaaaacacaggagaattttggaagcccacaggctttgcaaactttttattggttctagggaagttcaacaactcccattgatgagaaggagattctgacaattgcccggatatgttcaggtttccacatttgatactttaaaagagaagcatgggcataagattcattctttcaatatgtaaaatagaagttggtcacataattctattgattggacaaaggacaatatttttggcctcttatactctctattatactatagcttaagaggcaatgatagtgcatcccaggaaatgctcatcattgccatcatcagtcatacaaattggtgaatttgcgagaagaaaagctaggcgctgcgccctgttagctgcagagatcatttttccttgttaattttgttgtcattacttcattcaatcatattagactgttgtaggctatgaaacttgcatcacatagttggataaacccgtagattattacatttgctacttgttttgtatgattcaatgatatgtgcagattcatttttaccaaaaatttctccagtttttgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0025E22-LbUfe/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0025E22.1" temp_strand="+" temp_description="C02SLm0025E22.1  AC215476.1 htgs_phase:3 submitted_to_sgn_as:C02SLm0025E22 sequenced_by:kribb upload_account_name:korea">
        <position start="109931" stop="111191"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="110235" g_stop="110891" g_length="657"/>
          <reference_exon_boundary r_type="cDNA" r_start="32" r_stop="688" r_length="657" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0025E22.1" gen_strand="+" ref_id="SGN-U586015" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>657</cumulative_length_of_scored_exons>
        <coverage percentage="0.955" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0025E22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U586015" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="110235" e_stop="110891"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATCTCCGTCCTTTTTGGACCAAGTTCGTTAACAGCTCCAATGATTTTATCAGTAATTGCCACATACTGGAGTAGTCTACAGATTTTCCATCAAGGAAAAAACACAGGAGAATTTTGGAAGCCCACAGGCTTTGCAAACTTTTTATTGGTTCTAGGGAAGTTCAACAACTCCCATTGATGAGAAGGAGATTCTGACAATTGCCCGGATATGTTCAGGTTTCCACATTTGATACTTTAAAAGAGAAGCATGGGCATAAGATTCATTCTTTCAATATGTAAAATAGAAGTTGGTCACATAATTCTATTGATTGGACAAAGGACAATATTTTTGGCCTCTTATACTCTCTATTATACTATAGCTTAAGAGGCAATGATAGTGCATCCCAGGAAATGCTCATCATTGCCATCATCAGTCATACAAATTGGTGAATTTGCGAGAAGAAAAGCTAGGCGCTGCGCCCTGTTAGCTGCAGAGATCATTTTTCCTTGTTAATTTTGTTGTCATTACTTCATTCAATCATATTAGACTGTTGTAGGCTATGAAACTTGCATCACATAGTTGGATAAACCCGTAGATTATTACATTTGCTACTTGTTTTGTATGATTCAATGATATGTGCAGATTCATTTTTACCAAAAATTTCTCCAGTTTTTGCT</genome_strand>
        <mrna_strand>CATCTCCGTCCTTTTTGGACCAAGTTCGTTAACAGCTCCAATGATTTTATCAGTAATTGCCACATACTGGAGTAGTCTACAGATTTTCCATCAAGGAAAAAACACAGGAGAATTTTGGAAGCCCACAGGCTTTGCAAACTTTTTATTGGTTCTAGGGAAGTTCAACAACTCCCATTGATGAGAAGGAGATTCTGACAATTGCCCGGATATGTTCAGGTTTCCACATTTGATACTTTAAAAGAGAAGCATGGGCATAAGATTCATTCTTTCAATATGTAAAATAGAAGTTGGTCACATAATTCTATTGATTGGACAAAGGACAATATTTTTGGCCTCTTATACTCTCTATTATACTATAGCTTAAGAGGCAATGATAGTGCATCCCAGGAAATGCTCATCATTGCCATCATCAGTCATACAAATTGGTGAATTTGCGAGAAGAAAAGCTAGGCGCTGCGCCCTGTTAGCTGCAGAGATCATTTTTCCTTGTTAATTTTGTTGTCATTACTTCATTCAATCATATTAGACTGTTGTAGGCTATGAAACTTGCATCACATAGTTGGATAAACCCGTAGATTATTACATTTGCTACTTGTTTTGTATGATTCAATGATATGTGCAGATTCATTTTTACCAAAAATTTCTCCAGTTTTTGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0025E22-LbUfe/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U571890" ref_strand="+" ref_description="SGN-U571890 Tomato 200607#2 [20 ESTs aligned] (*GB) gi|118489660|gb|ABK96631.1| (e_value=1e-47) unknown; (*ATH) AT5G15460.2 (e_value=2e-40) | Symbol: None | expressed protein | chr5:5018774-5020656 REVERSE | Aliases: None; (*SWP) sp|Q8LCS8|MUB2_ARATH (e_value=2e-39) Membrane-anchored ubiquitin-fold protein 2 OS=Arabidopsis thaliana GN=MUB2; ">
      <seq>ttttattgttaatgcattacacgtattacctaccctttccttttcttcttccctatactagttttgtagctctatctgtcttgaggaatatcatatgtaattactttgttcggtaaacagtggacagtttccagatcagtttctcttaacaatttaaggctgggatttgggaatttgatgagatccataaagtgtcaagaaccaaagactaaattctttggtcttgggagcttcagtgattgtgttaattaaggctgaacaggttacaggaagatcctagtaaaagatccttgtgttgggtttgttttgtaagttagaacaaggatgtctgcagctcaagatcaactggagattaagtttagattgattgatggaacagatattgggcccaagagtttttctgcggctacaagcgtagcaaccttaaaggagaacatccttgctcagtggcccagagagaaggataatggtccgcggacagtaaaagatgttaagttaatcagcgctggaagaatattggaaaacaacagaacagtggctgaatgcagaagcccgctatgtgatattcccggaggagtcacgaccatgcatgtggttgttcaaccaccagctcaggagaaagagaaaaaagcgtcagatgacatgaagcagaataagtgcctctgcgttatactatgatattcagttccaacagggggatggctatatgcaagataaagactggtggtggttgttaacaatactgaagttgatgaagtagtaacaaacaaacatgagttgttggcattccttccttgtattctcaagatcgtgtatggtctggtctcgtcattttcttttgtatttgctgctttcttttttagtgcttgatggattcaaagtccattctgcattgattgaaaatttgtgttgctgtcaagtataccatttcttttctgtaggactctgttgtctgtacaaaatacgaatgaactcgttggctgaattcataatttaatcttgaatatcttcttatggtgatcaatgtataatatatagatacaaaaaaaagtgcgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0025E22-LbUfe/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0025E22.1" temp_strand="+" temp_description="C02SLm0025E22.1  AC215476.1 htgs_phase:3 submitted_to_sgn_as:C02SLm0025E22 sequenced_by:kribb upload_account_name:korea">
        <position start="111831" stop="115396"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="112131" g_stop="112281" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="151" r_length="151" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="112282" i_stop="112607" i_length="326">
            <donor d_prob="0.948" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="112608" g_stop="112913" g_length="306"/>
          <reference_exon_boundary r_type="cDNA" r_start="152" r_stop="457" r_length="306" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="112914" i_stop="114269" i_length="1356">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="114270" g_stop="114434" g_length="165"/>
          <reference_exon_boundary r_type="cDNA" r_start="458" r_stop="622" r_length="165" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="114435" i_stop="114591" i_length="157">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.722" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="114592" g_stop="114682" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="623" r_stop="713" r_length="91" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="114683" i_stop="114754" i_length="72">
            <donor d_prob="0.916" d_score="1.00"/>
            <acceptor a_prob="0.831" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="114755" g_stop="115093" g_length="339"/>
          <reference_exon_boundary r_type="cDNA" r_start="714" r_stop="1052" r_length="339" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0025E22.1" gen_strand="+" ref_id="SGN-U571890" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>1052</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0025E22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U571890" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="112131" e_stop="112281"/>
          <exon e_start="112608" e_stop="112913"/>
          <exon e_start="114270" e_stop="114434"/>
          <exon e_start="114592" e_stop="114682"/>
          <exon e_start="114755" e_stop="115093"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTATTGTTAATGCATTACACGTATTACCTACCCTTTCCTTTTCTTCTTCCCTATACTAGTTTTGTAGCTCTATCTGTCTTGAGGAATATCATATGTAATTACTTTGTTCGGTAAACAGTGGACAGTTTCCAGATCAGTTTCTCTTAACAGTAAGCATTTGATGATAATTTTTTTGTTTTGTTTTAAAGATCCATTCTTTTGTAGAATTGTAACTTGATGATTCTTGTCTGCAGTTTGAGTACTTATTTTAATGTTTTCTTGACTTTGGGTTGTTAAAATTTGTGATTTCTTGGTTAATTTTAACTCAAGATTCTTGAATTTCTTTCTTTTGGGTTGTTTAAATTGTAGTTTGACTATCTTTTCTTGATAATCTAATCTAATTCAAGAAAGTGTAATTATTTACCTGATTTTGTGTGGGTTTATGTATATTTTGTCGGTGTTAATATTATGAATTCATATTTTGTTTTTTATGAAGATTTAAGGCTGGGATTTGGGAATTTGATGAGATCCATAAAGTGTCAAGAACCAAAGACTAAATTCTTTGGTCTTGGGAGCTTCAGTGATTGTGTTAATTAAGGCTGAACAGGTTACAGGAAGATCCTAGTAAAAGATCCTTGTGTTGGGTTTGTTTTGTAAGTTAGAACAAGGATGTCTGCAGCTCAAGATCAACTGGAGATTAAGTTTAGATTGATTGATGGAACAGATATTGGGCCCAAGAGTTTTTCTGCGGCTACAAGCGTAGCAACCTTAAAGGAGAACATCCTTGCTCAGTGGCCCAGAGGTTAGTTTAGTTCTTGAATAGCTGATAAATTGTGTGTGAGATTTTCAATTACCCTAGATTTCTGTTGGTGGCTTGATTGCTTTAAGAACCGTAATCATGGTTGTTAAGGCTCTAATATTTTGGAGCTTATCATAGTCTATGATCTGTAGTTGTTACTTTTGTTAGATAATATAGCTCTGTGGATAGTTCCTTCACTTAAGTTCTCTACCGAAAAGTAATATGTATACAATTTGTAGGGATTCTGAATGATAAAAAAAATTGGCACATTGTTATTCAGATAGTTGAGGCGCTTTGCTGCTTCAATCAAATAGTGGTGGACTTTCGCTTGAGATTGTTTTAGGCGTCTTCCTCTAAAGGGATATTGGTTAAGAAAGTCGACAAAGTAGACTCTGATAGTGTTTAGATGACATGAAGCTCTGGCTAATCAAACCTTTCAACTTTTAGATGTGCTGATGCATTGTTTGTTATGCAAATATTGGATATTCACTTTTTTCTGATAGGACTTCTAATTTTAAGCATGTATTTTAGAAAGGAAAATTGAGAAGCCTAAAAGAATGATGTGTTAGTCCATATAATAAAACCAACATCTAATGAAAAGTCGTTTGATTAGGTCCCTGTAATAAAAACCGATATTTTCAATGCACCTAGTTCAATGGCAGTAAGTTCGTGCATGTCTTTCAGAATGTCCTATTTCATTCACGTGTTGCTAAGTATGTCAAATTCCTTGACTGAACTTTAAGGTTTGCACAGTTCACCGGAGCAGGTATCGAGTAAATCATGTTTTCTCAGCATTCGAGATGACTCTGAAAGAATTAGCTGCGATGCAAACAAAAATATATTGAATTAGAAAGGCATTATACATAAATCTGCTCTTTAACTTGGCTTCAAATATCATTTACGCCCTTCAACTTTGGATGTGCACAAATAGACACTTAAACTTGTATAAAGTTGAATAAATAGACACATATGTCCTACATGTCATCTTACATGTCATTTTTTGTCCTACGTGGTGTCTTACGTGTATTGTGTTATGTACGACTCATGTGTTTATTTATTTAAAAGTTGAATAGTTAAAGTGCTTGTTTGTGCATTATGAAAGTTGGAAGTCAAAATTAAAATTTAAAGCCAAGTTTAGGGTCCAATATATGTATTATGTCAATTAGAAACATGAGCTCTTTTCTTGAAATTCTTTTTTCATATTTTCAGATAATTTACCTGAATGTTGTGCACTTTCTCTCTGTTATCAAATATTTTCTGCTATTAATTTTCTTTCTATAGTCTTTTGTTAAGTATTGGGTTCAATCTTGTTACAAGTTTTCAAGTCATGTTTTCTGAGACATATATCTTATGTAATAGAGAAGGATAATGGTCCGCGGACAGTAAAAGATGTTAAGTTAATCAGCGCTGGAAGAATATTGGAAAACAACAGAACAGTGGCTGAATGCAGAAGCCCGCTATGTGATATTCCCGGAGGAGTCACGACCATGCATGTGGTTGTTCAACCACCAGCTCAGGAGAAAGGTCAGCTTAGATTTACTAAACATATCAACGCCATATAAAACAGTATTTACTGCCTTTAGGATGTTTGATTTCCATTCTGTGTTTTACGTTCTTTTTAGTTGTGTCGCTGTCTCTGAACAAAATGTTTGTTGTTTGAATTTTGCTACTGGTGAAACAGAGAAAAAAGCGTCAGATGACATGAAGCAGAATAAGTGCCTCTGCGTTATACTATGATATTCAGTTCCAACAGGGGGATGGCTATATGCAAGGTAGGTAGTTGCTTTTCGTCATCGACAGATATCAAGGTCTGTAAACTGATGTTTTGGACCCTCTACTTTCAGATAAAGACTGGTGGTGGTTGTTAACAATACTGAAGTTGATGAAGTAGTAACAAACAAACATGAGTTGTTGGCATTCCTTCCTTGTATTCTCAAGATCGTGTATGGTCTGGTCTCGTCATTTTCTTTTGTATTTGCTGCTTTCTTTTTTAGTGCTTGATGGATTCAAAGTCCATTCTGCATTGATTGAAAATTTGTGTTGCTGTCAAGTATACCATTTCTTTTCTGTAGGACTCTGTTGTCTGTACAAAATACGAATGAACTCGTTGGCTGAATTCATAATTTAATCTTGAATATCTTCTTATGGTGATCAATGTATAATATATAGATACAAAAAATTGT</genome_strand>
        <mrna_strand>TTTTATTGTTAATGCATTACACGTATTACCTACCCTTTCCTTTTCTTCTTCCCTATACTAGTTTTGTAGCTCTATCTGTCTTGAGGAATATCATATGTAATTACTTTGTTCGGTAAACAGTGGACAGTTTCCAGATCAGTTTCTCTTAACA......................................................................................................................................................................................................................................................................................................................................ATTTAAGGCTGGGATTTGGGAATTTGATGAGATCCATAAAGTGTCAAGAACCAAAGACTAAATTCTTTGGTCTTGGGAGCTTCAGTGATTGTGTTAATTAAGGCTGAACAGGTTACAGGAAGATCCTAGTAAAAGATCCTTGTGTTGGGTTTGTTTTGTAAGTTAGAACAAGGATGTCTGCAGCTCAAGATCAACTGGAGATTAAGTTTAGATTGATTGATGGAACAGATATTGGGCCCAAGAGTTTTTCTGCGGCTACAAGCGTAGCAACCTTAAAGGAGAACATCCTTGCTCAGTGGCCCAGAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAGGATAATGGTCCGCGGACAGTAAAAGATGTTAAGTTAATCAGCGCTGGAAGAATATTGGAAAACAACAGAACAGTGGCTGAATGCAGAAGCCCGCTATGTGATATTCCCGGAGGAGTCACGACCATGCATGTGGTTGTTCAACCACCAGCTCAGGAGAAAG.............................................................................................................................................................AGAAAAAAGCGTCAGATGACATGAAGCAGAATAAGTGCCTCTGCGTTATACTATGATATTCAGTTCCAACAGGGGGATGGCTATATGCAAG........................................................................ATAAAGACTGGTGGTGGTTGTTAACAATACTGAAGTTGATGAAGTAGTAACAAACAAACATGAGTTGTTGGCATTCCTTCCTTGTATTCTCAAGATCGTGTATGGTCTGGTCTCGTCATTTTCTTTTGTATTTGCTGCTTTCTTTTTTAGTGCTTGATGGATTCAAAGTCCATTCTGCATTGATTGAAAATTTGTGTTGCTGTCAAGTATACCATTTCTTTTCTGTAGGACTCTGTTGTCTGTACAAAATACGAATGAACTCGTTGGCTGAATTCATAATTTAATCTTGAATATCTTCTTATGGTGATCAATGTATAATATATAGATACAAAAAAAAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0025E22-LbUfe/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U587444" ref_strand="+" ref_description="SGN-U587444 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>ccccgaggaatatcatatgtaattactttgttcggtaaacagtggacagtttccagatcagtttctcttaacaatttaaggctgggatttgggaatttgatgagatccataaagtgtcaagaaccaaagactaaaagaggtgggcttgggagcttcagtaaccgggtctgtttgcggatcacaggttacaggaagatcctagtaaaagatccttgagtagggtttgattcgtaagttagaacaaggatgtctgcagctcaagatcaactggagatta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0025E22-LbUfe/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0025E22.1" temp_strand="+" temp_description="C02SLm0025E22.1  AC215476.1 htgs_phase:3 submitted_to_sgn_as:C02SLm0025E22 sequenced_by:kribb upload_account_name:korea">
        <position start="111913" stop="113111"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="112209" g_stop="112281" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="73" r_length="73" r_score="0.959"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="112282" i_stop="112607" i_length="326">
            <donor d_prob="0.948" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="112608" g_stop="112811" g_length="204"/>
          <reference_exon_boundary r_type="cDNA" r_start="74" r_stop="277" r_length="204" r_score="0.887"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0025E22.1" gen_strand="+" ref_id="SGN-U587444" ref_strand="+">
        <total_alignment_score>0.906</total_alignment_score>
        <cumulative_length_of_scored_exons>277</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0025E22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U587444" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="112209" e_stop="112281"/>
          <exon e_start="112608" e_stop="112811"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTTGAGGAATATCATATGTAATTACTTTGTTCGGTAAACAGTGGACAGTTTCCAGATCAGTTTCTCTTAACAGTAAGCATTTGATGATAATTTTTTTGTTTTGTTTTAAAGATCCATTCTTTTGTAGAATTGTAACTTGATGATTCTTGTCTGCAGTTTGAGTACTTATTTTAATGTTTTCTTGACTTTGGGTTGTTAAAATTTGTGATTTCTTGGTTAATTTTAACTCAAGATTCTTGAATTTCTTTCTTTTGGGTTGTTTAAATTGTAGTTTGACTATCTTTTCTTGATAATCTAATCTAATTCAAGAAAGTGTAATTATTTACCTGATTTTGTGTGGGTTTATGTATATTTTGTCGGTGTTAATATTATGAATTCATATTTTGTTTTTTATGAAGATTTAAGGCTGGGATTTGGGAATTTGATGAGATCCATAAAGTGTCAAGAACCAAAGACTAAATTCTTTGGTCTTGGGAGCTTCAGTGATTGTGT-TAATTAAGGCTGAACAGGTTACAGGAAGATCCTAGTAAAAGATCCTTGTGTTGGGTTTGTTTTGTAAGTTAGAACAAGGATGTCTGCAGCTCAAGATCAACTGGAGATTA</genome_strand>
        <mrna_strand>CCCCGAGGAATATCATATGTAATTACTTTGTTCGGTAAACAGTGGACAGTTTCCAGATCAGTTTCTCTTAACA......................................................................................................................................................................................................................................................................................................................................ATTTAAGGCTGGGATTTGGGAATTTGATGAGATCCATAAAGTGTCAAGAACCAAAGACTAAAAGAGGTGGGCTTGGGAGCTTCAGTAACCGGGTCTGTTTGCGGAT-CACAGGTTACAGGAAGATCCTAGTAAAAGATCCTTGAGTAGGGTTTGATTCGTAAGTTAGAACAAGGATGTCTGCAGCTCAAGATCAACTGGAGATTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0025E22-LbUfe/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U587443" ref_strand="+" ref_description="SGN-U587443 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|118489660|gb|ABK96631.1| (e_value=7e-48) unknown; (*ATH) AT5G15460.2 (e_value=2e-40) | Symbol: None | expressed protein | chr5:5018774-5020656 REVERSE | Aliases: None; (*SWP) sp|Q8LCS8|MUB2_ARATH (e_value=2e-39) Membrane-anchored ubiquitin-fold protein 2 OS=Arabidopsis thaliana GN=MUB2; ">
      <seq>cgctttgcagtttgagtacttattttaatgttttcttgactttgggttgttaaaatttgtgatttcttggttaattttaactcaagattcttgaatttctttcttttgggttgtttaaattgtagtttgactatcttttcttgataatctaatctaattcaagaaagtgtaattatttacctgattttgtgtgggtttatgtatattttgtcggtgttaatattatgaattcatattttgttttttatgaagatttaaggctgggatttgggaatttgatgagatccataaagtgtcaagaaccaaagactaaattctttggtcttgggagcttcagtgattgtgttaattaaggctgaacaggttacaggaagatcctagtaaaagatccttgtgttgggtttgttttgtaagttagaacaaggatgtctgcagctcaagatcaactggagattaagtttagattgattgatggaacagatattgggcccaagagtttttctgcggctacaagcgtagcaaccttaaaggagaacatccttgctcagtggcccagagagaaggataatggtccgcggacagtaaaagatgttaagttaatcagcgctggaagaatattggaaaacaacagaacagtggctgaatgcagaagcccgctatgtgatattcccggaggagtcacgaccatgcatgtggttgttcaaccaccagctcaggagaaagagaaaaaagcgtcagatgacatgaagcagaataagtgcctctgcgttatactatgatattcagttccaacagggggatggctatatgcaagataaagactggtggtggttgttaacaatactg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0025E22-LbUfe/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0025E22.1" temp_strand="+" temp_description="C02SLm0025E22.1  AC215476.1 htgs_phase:3 submitted_to_sgn_as:C02SLm0025E22 sequenced_by:kribb upload_account_name:korea">
        <position start="112059" stop="115086"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="112356" g_stop="112913" g_length="558"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="558" r_length="558" r_score="0.993"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="112914" i_stop="114269" i_length="1356">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="114270" g_stop="114434" g_length="165"/>
          <reference_exon_boundary r_type="cDNA" r_start="559" r_stop="723" r_length="165" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="114435" i_stop="114591" i_length="157">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.722" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="114592" g_stop="114682" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="724" r_stop="814" r_length="91" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="114683" i_stop="114754" i_length="72">
            <donor d_prob="0.916" d_score="1.00"/>
            <acceptor a_prob="0.831" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="114755" g_stop="114786" g_length="32"/>
          <reference_exon_boundary r_type="cDNA" r_start="815" r_stop="846" r_length="32" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0025E22.1" gen_strand="+" ref_id="SGN-U587443" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>846</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0025E22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U587443" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="112356" e_stop="112913"/>
          <exon e_start="114270" e_stop="114434"/>
          <exon e_start="114592" e_stop="114682"/>
          <exon e_start="114755" e_stop="114786"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGTCTGCAGTTTGAGTACTTATTTTAATGTTTTCTTGACTTTGGGTTGTTAAAATTTGTGATTTCTTGGTTAATTTTAACTCAAGATTCTTGAATTTCTTTCTTTTGGGTTGTTTAAATTGTAGTTTGACTATCTTTTCTTGATAATCTAATCTAATTCAAGAAAGTGTAATTATTTACCTGATTTTGTGTGGGTTTATGTATATTTTGTCGGTGTTAATATTATGAATTCATATTTTGTTTTTTATGAAGATTTAAGGCTGGGATTTGGGAATTTGATGAGATCCATAAAGTGTCAAGAACCAAAGACTAAATTCTTTGGTCTTGGGAGCTTCAGTGATTGTGTTAATTAAGGCTGAACAGGTTACAGGAAGATCCTAGTAAAAGATCCTTGTGTTGGGTTTGTTTTGTAAGTTAGAACAAGGATGTCTGCAGCTCAAGATCAACTGGAGATTAAGTTTAGATTGATTGATGGAACAGATATTGGGCCCAAGAGTTTTTCTGCGGCTACAAGCGTAGCAACCTTAAAGGAGAACATCCTTGCTCAGTGGCCCAGAGGTTAGTTTAGTTCTTGAATAGCTGATAAATTGTGTGTGAGATTTTCAATTACCCTAGATTTCTGTTGGTGGCTTGATTGCTTTAAGAACCGTAATCATGGTTGTTAAGGCTCTAATATTTTGGAGCTTATCATAGTCTATGATCTGTAGTTGTTACTTTTGTTAGATAATATAGCTCTGTGGATAGTTCCTTCACTTAAGTTCTCTACCGAAAAGTAATATGTATACAATTTGTAGGGATTCTGAATGATAAAAAAAATTGGCACATTGTTATTCAGATAGTTGAGGCGCTTTGCTGCTTCAATCAAATAGTGGTGGACTTTCGCTTGAGATTGTTTTAGGCGTCTTCCTCTAAAGGGATATTGGTTAAGAAAGTCGACAAAGTAGACTCTGATAGTGTTTAGATGACATGAAGCTCTGGCTAATCAAACCTTTCAACTTTTAGATGTGCTGATGCATTGTTTGTTATGCAAATATTGGATATTCACTTTTTTCTGATAGGACTTCTAATTTTAAGCATGTATTTTAGAAAGGAAAATTGAGAAGCCTAAAAGAATGATGTGTTAGTCCATATAATAAAACCAACATCTAATGAAAAGTCGTTTGATTAGGTCCCTGTAATAAAAACCGATATTTTCAATGCACCTAGTTCAATGGCAGTAAGTTCGTGCATGTCTTTCAGAATGTCCTATTTCATTCACGTGTTGCTAAGTATGTCAAATTCCTTGACTGAACTTTAAGGTTTGCACAGTTCACCGGAGCAGGTATCGAGTAAATCATGTTTTCTCAGCATTCGAGATGACTCTGAAAGAATTAGCTGCGATGCAAACAAAAATATATTGAATTAGAAAGGCATTATACATAAATCTGCTCTTTAACTTGGCTTCAAATATCATTTACGCCCTTCAACTTTGGATGTGCACAAATAGACACTTAAACTTGTATAAAGTTGAATAAATAGACACATATGTCCTACATGTCATCTTACATGTCATTTTTTGTCCTACGTGGTGTCTTACGTGTATTGTGTTATGTACGACTCATGTGTTTATTTATTTAAAAGTTGAATAGTTAAAGTGCTTGTTTGTGCATTATGAAAGTTGGAAGTCAAAATTAAAATTTAAAGCCAAGTTTAGGGTCCAATATATGTATTATGTCAATTAGAAACATGAGCTCTTTTCTTGAAATTCTTTTTTCATATTTTCAGATAATTTACCTGAATGTTGTGCACTTTCTCTCTGTTATCAAATATTTTCTGCTATTAATTTTCTTTCTATAGTCTTTTGTTAAGTATTGGGTTCAATCTTGTTACAAGTTTTCAAGTCATGTTTTCTGAGACATATATCTTATGTAATAGAGAAGGATAATGGTCCGCGGACAGTAAAAGATGTTAAGTTAATCAGCGCTGGAAGAATATTGGAAAACAACAGAACAGTGGCTGAATGCAGAAGCCCGCTATGTGATATTCCCGGAGGAGTCACGACCATGCATGTGGTTGTTCAACCACCAGCTCAGGAGAAAGGTCAGCTTAGATTTACTAAACATATCAACGCCATATAAAACAGTATTTACTGCCTTTAGGATGTTTGATTTCCATTCTGTGTTTTACGTTCTTTTTAGTTGTGTCGCTGTCTCTGAACAAAATGTTTGTTGTTTGAATTTTGCTACTGGTGAAACAGAGAAAAAAGCGTCAGATGACATGAAGCAGAATAAGTGCCTCTGCGTTATACTATGATATTCAGTTCCAACAGGGGGATGGCTATATGCAAGGTAGGTAGTTGCTTTTCGTCATCGACAGATATCAAGGTCTGTAAACTGATGTTTTGGACCCTCTACTTTCAGATAAAGACTGGTGGTGGTTGTTAACAATACTG</genome_strand>
        <mrna_strand>CGCTTTGCAGTTTGAGTACTTATTTTAATGTTTTCTTGACTTTGGGTTGTTAAAATTTGTGATTTCTTGGTTAATTTTAACTCAAGATTCTTGAATTTCTTTCTTTTGGGTTGTTTAAATTGTAGTTTGACTATCTTTTCTTGATAATCTAATCTAATTCAAGAAAGTGTAATTATTTACCTGATTTTGTGTGGGTTTATGTATATTTTGTCGGTGTTAATATTATGAATTCATATTTTGTTTTTTATGAAGATTTAAGGCTGGGATTTGGGAATTTGATGAGATCCATAAAGTGTCAAGAACCAAAGACTAAATTCTTTGGTCTTGGGAGCTTCAGTGATTGTGTTAATTAAGGCTGAACAGGTTACAGGAAGATCCTAGTAAAAGATCCTTGTGTTGGGTTTGTTTTGTAAGTTAGAACAAGGATGTCTGCAGCTCAAGATCAACTGGAGATTAAGTTTAGATTGATTGATGGAACAGATATTGGGCCCAAGAGTTTTTCTGCGGCTACAAGCGTAGCAACCTTAAAGGAGAACATCCTTGCTCAGTGGCCCAGAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAGGATAATGGTCCGCGGACAGTAAAAGATGTTAAGTTAATCAGCGCTGGAAGAATATTGGAAAACAACAGAACAGTGGCTGAATGCAGAAGCCCGCTATGTGATATTCCCGGAGGAGTCACGACCATGCATGTGGTTGTTCAACCACCAGCTCAGGAGAAAG.............................................................................................................................................................AGAAAAAAGCGTCAGATGACATGAAGCAGAATAAGTGCCTCTGCGTTATACTATGATATTCAGTTCCAACAGGGGGATGGCTATATGCAAG........................................................................ATAAAGACTGGTGGTGGTTGTTAACAATACTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0025E22-LbUfe/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U587442" ref_strand="+" ref_description="SGN-U587442 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|118489660|gb|ABK96631.1| (e_value=7e-19) unknown; (*ATH) AT5G15460.2 (e_value=2e-15) | Symbol: None | expressed protein | chr5:5018774-5020656 REVERSE | Aliases: None; (*SWP) sp|Q8LCS8|MUB2_ARATH (e_value=1e-14) Membrane-anchored ubiquitin-fold protein 2 OS=Arabidopsis thaliana GN=MUB2; ">
      <seq>ctgctattaattttctttctatagtcttttgttaagtattgggttcaatcttgttacaagttttcaagtcatgttttctgagacatatatcttatgtaatagagaaggataatggtccgcggacagtaaaagatgttaagttaatcagcgctggaagaatattggaaagcaacagaacagtggctgaatgcaaaagcccactatgtgatattcccggaggagtcacgaccatgcatgtggttgttcaaccaccagctcaggagaaaggtcagcttaaatttactaaacatatcaacgccatataaaatagtatttactgcctttaggatgtttgatttccattctgtgttttacgttctttttagttgtgtcgctgtctctgaacaaaatgtttgttgtttgaattttgctactggtgaaacagaaaaaaaagcgtcagatgacatgaagcagaataagtgcctctgcgttatactatgatattcagttccaacagggggatggctatatgcaaggtaggtagttgcttttcgtcatcgacagatatcaaggtctgtaaactgatgttttggaccctctactttcagataaagactggtggtggttgttaacaatactgaagttgatgaagtagtaacaaacaaacatgagttgttggcattccttccttgtattctcaagatcgtgtatggtctggtctcgtcattttcttttgtatttgctgctttctttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0025E22-LbUfe/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0025E22.1" temp_strand="+" temp_description="C02SLm0025E22.1  AC215476.1 htgs_phase:3 submitted_to_sgn_as:C02SLm0025E22 sequenced_by:kribb upload_account_name:korea">
        <position start="113868" stop="115200"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="114168" g_stop="114900" g_length="733"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="733" r_length="733" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0025E22.1" gen_strand="+" ref_id="SGN-U587442" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>733</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0025E22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U587442" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="114168" e_stop="114900"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGCTATTAATTTTCTTTCTATAGTCTTTTGTTAAGTATTGGGTTCAATCTTGTTACAAGTTTTCAAGTCATGTTTTCTGAGACATATATCTTATGTAATAGAGAAGGATAATGGTCCGCGGACAGTAAAAGATGTTAAGTTAATCAGCGCTGGAAGAATATTGGAAAACAACAGAACAGTGGCTGAATGCAGAAGCCCGCTATGTGATATTCCCGGAGGAGTCACGACCATGCATGTGGTTGTTCAACCACCAGCTCAGGAGAAAGGTCAGCTTAGATTTACTAAACATATCAACGCCATATAAAACAGTATTTACTGCCTTTAGGATGTTTGATTTCCATTCTGTGTTTTACGTTCTTTTTAGTTGTGTCGCTGTCTCTGAACAAAATGTTTGTTGTTTGAATTTTGCTACTGGTGAAACAGAGAAAAAAGCGTCAGATGACATGAAGCAGAATAAGTGCCTCTGCGTTATACTATGATATTCAGTTCCAACAGGGGGATGGCTATATGCAAGGTAGGTAGTTGCTTTTCGTCATCGACAGATATCAAGGTCTGTAAACTGATGTTTTGGACCCTCTACTTTCAGATAAAGACTGGTGGTGGTTGTTAACAATACTGAAGTTGATGAAGTAGTAACAAACAAACATGAGTTGTTGGCATTCCTTCCTTGTATTCTCAAGATCGTGTATGGTCTGGTCTCGTCATTTTCTTTTGTATTTGCTGCTTTCTTTT</genome_strand>
        <mrna_strand>CTGCTATTAATTTTCTTTCTATAGTCTTTTGTTAAGTATTGGGTTCAATCTTGTTACAAGTTTTCAAGTCATGTTTTCTGAGACATATATCTTATGTAATAGAGAAGGATAATGGTCCGCGGACAGTAAAAGATGTTAAGTTAATCAGCGCTGGAAGAATATTGGAAAGCAACAGAACAGTGGCTGAATGCAAAAGCCCACTATGTGATATTCCCGGAGGAGTCACGACCATGCATGTGGTTGTTCAACCACCAGCTCAGGAGAAAGGTCAGCTTAAATTTACTAAACATATCAACGCCATATAAAATAGTATTTACTGCCTTTAGGATGTTTGATTTCCATTCTGTGTTTTACGTTCTTTTTAGTTGTGTCGCTGTCTCTGAACAAAATGTTTGTTGTTTGAATTTTGCTACTGGTGAAACAGAAAAAAAAGCGTCAGATGACATGAAGCAGAATAAGTGCCTCTGCGTTATACTATGATATTCAGTTCCAACAGGGGGATGGCTATATGCAAGGTAGGTAGTTGCTTTTCGTCATCGACAGATATCAAGGTCTGTAAACTGATGTTTTGGACCCTCTACTTTCAGATAAAGACTGGTGGTGGTTGTTAACAATACTGAAGTTGATGAAGTAGTAACAAACAAACATGAGTTGTTGGCATTCCTTCCTTGTATTCTCAAGATCGTGTATGGTCTGGTCTCGTCATTTTCTTTTGTATTTGCTGCTTTCTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>18</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="+" PGL_start="15809" PGL_stop="19053"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="15809" e_stop="16043"/>
            <exon e_start="16623" e_stop="16723"/>
            <exon e_start="17544" e_stop="17650"/>
            <exon e_start="18137" e_stop="18172"/>
            <exon e_start="18254" e_stop="18339"/>
            <exon e_start="18666" e_stop="18733"/>
            <exon e_start="18814" e_stop="18924"/>
            <exon e_start="19023" e_stop="19053"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.958" acc_prob="0.983" e_score="1.000"/>
          <exon-intron don_prob="0.986" acc_prob="0.678" e_score="1.000"/>
          <exon-intron don_prob="0.377" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.736" acc_prob="0.580" e_score="1.000"/>
          <exon-intron don_prob="0.988" acc_prob="0.997" e_score="0.946"/>
          <exon-only e_score="0.742"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="15809" e_stop="16043" e_length="235"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.999">
            <gDNA_intron_boundary i_start="16044" i_stop="16622" i_length="579"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="16623" e_stop="16723" e_length="101"/>
          </exon>
          <intron i_serial="2" don_prob="0.991" acc_prob="0.999">
            <gDNA_intron_boundary i_start="16724" i_stop="17543" i_length="820"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="17544" e_stop="17650" e_length="107"/>
          </exon>
          <intron i_serial="3" don_prob="0.958" acc_prob="0.983">
            <gDNA_intron_boundary i_start="17651" i_stop="18136" i_length="486"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="18137" e_stop="18172" e_length="36"/>
          </exon>
          <intron i_serial="4" don_prob="0.986" acc_prob="0.678">
            <gDNA_intron_boundary i_start="18173" i_stop="18253" i_length="81"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="18254" e_stop="18339" e_length="86"/>
          </exon>
          <intron i_serial="5" don_prob="0.377" acc_prob="0.999">
            <gDNA_intron_boundary i_start="18340" i_stop="18665" i_length="326"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="18666" e_stop="18733" e_length="68"/>
          </exon>
          <intron i_serial="6" don_prob="0.736" acc_prob="0.580">
            <gDNA_intron_boundary i_start="18734" i_stop="18813" i_length="80"/>
          </intron>
          <exon e_serial="7" e_score="0.946">
            <gDNA_exon_boundary e_start="18814" e_stop="18924" e_length="111"/>
          </exon>
          <intron i_serial="7" don_prob="0.988" acc_prob="0.997">
            <gDNA_intron_boundary i_start="18925" i_stop="19022" i_length="98"/>
          </intron>
          <exon e_serial="8" e_score="0.742">
            <gDNA_exon_boundary e_start="19023" e_stop="19053" e_length="31"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15809" stop="16043"/>
              <exon start="16623" stop="16723"/>
              <exon start="17544" stop="17650"/>
              <exon start="18137" stop="18172"/>
              <exon start="18254" stop="18339"/>
              <exon start="18666" stop="18733"/>
              <exon start="18814" stop="18924"/>
              <exon start="19023" stop="19053"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U568807" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GCCCGTGAACGTCTCTACCCTCACACTCCGCACCCTTCTCTCTCTCTACACAATACTTTTTTAATGGCGGGTATGGACATTGATGGCAACGTTGAAGAGGCTGCAAGGCGTGTACAGGTCCGGTTCGTCACGAAGTTGAAAGCACCCTTTAAGGCTCCGCCTACTTCTATTGCTATTCCCTCTAATCTTACCCGATTGGGCCTCTCTTCCATCGTCAACAACCTCCTTAAAGCCG : GAAATGATGATTGGAATCCCGAGCCTTTTGATTTTCTCATTGATGGGGAACTGGTCCGCATGTCACTTGAAGAGTTTCTCCTTGCCAAGGGCATTTCAGCT : GAGAAAATATTGGAGATTGAGTACATTAGAGCTGTGGCTCCGAGGAAAGAAGAAGAGCCATCTTTGCATGACGATTGGGTCAGTGCAGTTGATGGTTCTAATTCCAT : GTTTGTTGTGACTGGATGTTATGATGGTTTTGGAAG : AATATGGATGGCTGCTGGATCTTGTACGCATCTACTGGAGGGCCATACTGATGCAATTACTTCTGTTTGTGTTGTCAAACCAAGAG : TGGCTCAAAATGGTGCTGATCAAATAGTCGCTACGGCTTCCAAGGATAGGACACTGCGTCTCTGGAAG : TTTGATGCAGATGAGTCTTCGGATCAGACAAAGAGGATTAGAGCCTTTAAGATTTTACATGGACATAATGCTTCCGTCCAAAGTGTTACAGCAAATCCTGCTGGAGATATG : GTGTGTTCAGGGTCCTGGGATTCCCAAATAG</gDNA_template>
            <first_frame> A  R  E  R  L  Y  P  H  T  P  H  P  S  L  S  L  H  N  T  F  L  M  A  G  M  D  I  D  G  N  V  E  E  A  A  R  R  V  Q  V  R  F  V  T  K  L  K  A  P  F  K  A  P  P  T  S  I  A  I  P  S  N  L  T  R  L  G  L  S  S  I  V  N  N  L  L  K  A   : G  N  D  D  W  N  P  E  P  F  D  F  L  I  D  G  E  L  V  R  M  S  L  E  E  F  L  L  A  K  G  I  S  A  :  E  K  I  L  E  I  E  Y  I  R  A  V  A  P  R  K  E  E  E  P  S  L  H  D  D  W  V  S  A  V  D  G  S  N  S  M :   F  V  V  T  G  C  Y  D  G  F  G  R :   I  W  M  A  A  G  S  C  T  H  L  L  E  G  H  T  D  A  I  T  S  V  C  V  V  K  P  R   : V  A  Q  N  G  A  D  Q  I  V  A  T  A  S  K  D  R  T  L  R  L  W  K  :  F  D  A  D  E  S  S  D  Q  T  K  R  I  R  A  F  K  I  L  H  G  H  N  A  S  V  Q  S  V  T  A  N  P  A  G  D  M  :  V  C  S  G  S  W  D  S  Q  I  </first_frame>
            <second_frame>  P  V  N  V  S  T  L  T  L  R  T  L  L  S  L  Y  T  I  L  F  *  W  R  V  W  T  L  M  A  T  L  K  R  L  Q  G  V  Y  R  S  G  S  S  R  S  *  K  H  P  L  R  L  R  L  L  L  L  L  F  P  L  I  L  P  D  W  A  S  L  P  S  S  T  T  S  L  K  P  :  E  M  M  I  G  I  P  S  L  L  I  F  S  L  M  G  N  W  S  A  C  H  L  K  S  F  S  L  P  R  A  F  Q  L :   R  K  Y  W  R  L  S  T  L  E  L  W  L  R  G  K  K  K  S  H  L  C  M  T  I  G  S  V  Q  L  M  V  L  I  P   : C  L  L  *  L  D  V  M  M  V  L  E   : E  Y  G  W  L  L  D  L  V  R  I  Y  W  R  A  I  L  M  Q  L  L  L  F  V  L  S  N  Q  E  :  W  L  K  M  V  L  I  K  *  S  L  R  L  P  R  I  G  H  C  V  S  G  S :   L  M  Q  M  S  L  R  I  R  Q  R  G  L  E  P  L  R  F  Y  M  D  I  M  L  P  S  K  V  L  Q  Q  I  L  L  E  I  W :   C  V  Q  G  P  G  I  P  K  * </second_frame>
            <third_frame>   P  *  T  S  L  P  S  H  S  A  P  F  S  L  S  T  Q  Y  F  F  N  G  G  Y  G  H  *  W  Q  R  *  R  G  C  K  A  C  T  G  P  V  R  H  E  V  E  S  T  L  *  G  S  A  Y  F  Y  C  Y  S  L  *  S  Y  P  I  G  P  L  F  H  R  Q  Q  P  P  *  S  R :   K  *  *  L  E  S  R  A  F  *  F  S  H  *  W  G  T  G  P  H  V  T  *  R  V  S  P  C  Q  G  H  F  S   : *  E  N  I  G  D  *  V  H  *  S  C  G  S  E  E  R  R  R  A  I  F  A  *  R  L  G  Q  C  S  *  W  F  *  F  H  :  V  C  C  D  W  M  L  *  W  F  W  K  :  N  M  D  G  C  W  I  L  Y  A  S  T  G  G  P  Y  *  C  N  Y  F  C  L  C  C  Q  T  K  S :   G  S  K  W  C  *  S  N  S  R  Y  G  F  Q  G  *  D  T  A  S  L  E   : V  *  C  R  *  V  F  G  S  D  K  E  D  *  S  L  *  D  F  T  W  T  *  C  F  R  P  K  C  Y  S  K  S  C  W  R  Y   : G  V  F  R  V  L  G  F  P  N   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0025E22.1" strand="+"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="15809" stop="16043"/>
                    <exon start="16623" stop="16723"/>
                    <exon start="17544" stop="17650"/>
                    <exon start="18137" stop="18172"/>
                    <exon start="18254" stop="18339"/>
                    <exon start="18666" stop="18733"/>
                    <exon start="18814" stop="18924"/>
                    <exon start="19023" stop="19052"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>774</number_coding_nucleotides>
                  <number_encoded_amino_acids>258</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ARERLYPHTPHPSLSLHNTFLMAGMDIDGNVEEAARRVQVRFVTKLKAPFKAPPTSIAIPSNLTRLGLSSIVNNLLKAGNDDWNPEPFDFLIDGELVRMSLEEFLLAKGISAEKILEIEYIRAVAPRKEEEPSLHDDWVSAVDGSNSMFVVTGCYDGFGRIWMAAGSCTHLLEGHTDAITSVCVVKPRVAQNGADQIVATASKDRTLRLWKFDADESSDQTKRIRAFKILHGHNASVQSVTANPAGDMVCSGSWDSQI</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="+" PGL_start="23223" PGL_stop="32679"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="23223" e_stop="23324"/>
            <exon e_start="26530" e_stop="26808"/>
            <exon e_start="26895" e_stop="26971"/>
            <exon e_start="27912" e_stop="27988"/>
            <exon e_start="29051" e_stop="29141"/>
            <exon e_start="29706" e_stop="29796"/>
            <exon e_start="30089" e_stop="30162"/>
            <exon e_start="30367" e_stop="30477"/>
            <exon e_start="31384" e_stop="31455"/>
            <exon e_start="31631" e_stop="31651"/>
            <exon e_start="31774" e_stop="31841"/>
            <exon e_start="32315" e_stop="32679"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.992" acc_prob="0.975" e_score="0.990"/>
          <exon-intron don_prob="1.000" acc_prob="0.990" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.964" e_score="1.000"/>
          <exon-intron don_prob="0.416" acc_prob="0.957" e_score="0.974"/>
          <exon-intron don_prob="0.880" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.881" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.926" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.959" e_score="1.000"/>
          <exon-intron don_prob="0.976" acc_prob="0.987" e_score="1.000"/>
          <exon-intron don_prob="0.906" acc_prob="0.990" e_score="1.000"/>
          <exon-intron don_prob="0.734" acc_prob="0.979" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.990">
            <gDNA_exon_boundary e_start="23223" e_stop="23324" e_length="102"/>
          </exon>
          <intron i_serial="1" don_prob="0.992" acc_prob="0.975">
            <gDNA_intron_boundary i_start="23325" i_stop="26529" i_length="3205"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="26530" e_stop="26808" e_length="279"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="0.990">
            <gDNA_intron_boundary i_start="26809" i_stop="26894" i_length="86"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="26895" e_stop="26971" e_length="77"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="0.964">
            <gDNA_intron_boundary i_start="26972" i_stop="27911" i_length="940"/>
          </intron>
          <exon e_serial="4" e_score="0.974">
            <gDNA_exon_boundary e_start="27912" e_stop="27988" e_length="77"/>
          </exon>
          <intron i_serial="4" don_prob="0.416" acc_prob="0.957">
            <gDNA_intron_boundary i_start="27989" i_stop="29050" i_length="1062"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="29051" e_stop="29141" e_length="91"/>
          </exon>
          <intron i_serial="5" don_prob="0.880" acc_prob="0.995">
            <gDNA_intron_boundary i_start="29142" i_stop="29705" i_length="564"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="29706" e_stop="29796" e_length="91"/>
          </exon>
          <intron i_serial="6" don_prob="0.881" acc_prob="0.995">
            <gDNA_intron_boundary i_start="29797" i_stop="30088" i_length="292"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="30089" e_stop="30162" e_length="74"/>
          </exon>
          <intron i_serial="7" don_prob="0.991" acc_prob="0.926">
            <gDNA_intron_boundary i_start="30163" i_stop="30366" i_length="204"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="30367" e_stop="30477" e_length="111"/>
          </exon>
          <intron i_serial="8" don_prob="0.995" acc_prob="0.959">
            <gDNA_intron_boundary i_start="30478" i_stop="31383" i_length="906"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="31384" e_stop="31455" e_length="72"/>
          </exon>
          <intron i_serial="9" don_prob="0.976" acc_prob="0.987">
            <gDNA_intron_boundary i_start="31456" i_stop="31630" i_length="175"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="31631" e_stop="31651" e_length="21"/>
          </exon>
          <intron i_serial="10" don_prob="0.906" acc_prob="0.990">
            <gDNA_intron_boundary i_start="31652" i_stop="31773" i_length="122"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="31774" e_stop="31841" e_length="68"/>
          </exon>
          <intron i_serial="11" don_prob="0.734" acc_prob="0.979">
            <gDNA_intron_boundary i_start="31842" i_stop="32314" i_length="473"/>
          </intron>
          <exon e_serial="12" e_score="1.000">
            <gDNA_exon_boundary e_start="32315" e_stop="32679" e_length="365"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23223" stop="23324"/>
              <exon start="26530" stop="26808"/>
              <exon start="26895" stop="26971"/>
              <exon start="27912" stop="27988"/>
              <exon start="29051" stop="29141"/>
              <exon start="29706" stop="29796"/>
              <exon start="30089" stop="30162"/>
              <exon start="30367" stop="30477"/>
              <exon start="31384" stop="31455"/>
              <exon start="31631" stop="31651"/>
              <exon start="31774" stop="31841"/>
              <exon start="32315" stop="32679"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U570244" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGAAAAGCACACGAACAATCATCAGATAGTACAATTTGATACGCGACGACTCCCACAACTTTTATTATATATATGGAGACGCGAAAGAGACTATTCTAATAG : GCGCAAGCTGTTGACATGTTGGACGTCACCAGTAGGTCAATACAACACCCTTTCGTCTGCGCAGGAAGGCCCGCCTCATTTCTTTTTGCATAGACGGCAAAAAGAAAAGCGTTGGGAACAAGGGGGAAAGGAAGCCAACGGTTGATAGAGCCATGAAAAAGATGGCAGCTTTGCCATCGGCAGACTGGGAATGGGAAAATGCCACCGCCGGTGCTGCTGCAGGCCTTGCCACTGTCACATTCTCTCATCCCCTTGATGTTGTTCGCACCCGGTTCCAGG : TTTACGATGGAAGAATCTCCAATGTCCCGGCCTATCGGAACACTCCTCACGCTTTGTTTGCCATTGCTCGAAGTGAG : GGTCTTAGAGGACTTTATGCTGGCTTTTACCCTGCTGTTCTTGGGTCAACTATTTCATGGGGTTTATATTTTTTCTT : TTATAGCAAGGCTAAGCAAAGGTATCTAAGAAACAGGGAGGAGCTGAGTCCTGGCCTTCACCTTGCTTCAGCTGCAGAAGCAGGAGCGCTG : GTCTGTCTTTGCACCAACCCCATTTGGCTTGTGAAAACAAGATTGCAACTTCAGACTCCTAATCAGATTCGTCCATACACCGGATTTCATG : ATGCTTTAAGAACGATAATCAAAGAAGAAGGATGGAGGGCACTGTACAAGGGGCTTATGCCAAGCCTATTTCTG : ATTACACATGGTGCTATTCAGTTCACGGCATATGAGGAATTCCGCAAAGTCATTCTTAGCTCGAAAGCTCAGGAGAATGAAAACCCTCTTGCCACAGCTGCTGACTTGTTG : GATTCAGTTGACTATGCAACACTAGGAGCTTCTTCTAAGTTGGCAGCCACTCTTACAACATACCCATTTCAG : GTTGTCCGATCTCGATTGCAG : CAACGACCAAGTACGACTGGAGTTCCAAGATACATGGATAGCTGGCATGTTGTGAAGGAAACTGCAAG : GTTTGAGGGTTTACGCGGCTTTTACAGAGGTATCACAGCAAACGTGTTGAAAAATGCCCCTGCCGCTTCAATTACCTTCATTGTCTATGAGAATGTCCTAAACCTGCTAAAATTGTCTAGGAAAGAGTATTAGTTCTTTTACATCCTTTTTGCCTCCCATTTCTTGTTGTAGCAATTAGGATTCTACACCATTGAAACTATTTTTGGAAGAAGTATACTCTCAGATTTGACAGGAGTACAAAAATAGAAACAAGATATCATTAAAGAGAATGTGAACAGGAGACAATATAATGGCTGGTGTGGTGTAATTGTACTATATTTCTCGTCTTTGTAATTTATGAGAAAAGAATAATCTTTTTAGACTT</gDNA_template>
            <first_frame> R  K  A  H  E  Q  S  S  D  S  T  I  *  Y  A  T  T  P  T  T  F  I  I  Y  M  E  T  R  K  R  L  F  *  *  :  A  Q  A  V  D  M  L  D  V  T  S  R  S  I  Q  H  P  F  V  C  A  G  R  P  A  S  F  L  F  A  *  T  A  K  R  K  A  L  G  T  R  G  K  G  S  Q  R  L  I  E  P  *  K  R  W  Q  L  C  H  R  Q  T  G  N  G  K  M  P  P  P  V  L  L  Q  A  L  P  L  S  H  S  L  I  P  L  M  L  F  A  P  G  S  R  :  F  T  M  E  E  S  P  M  S  R  P  I  G  T  L  L  T  L  C  L  P  L  L  E  V  R :   V  L  E  D  F  M  L  A  F  T  L  L  F  L  G  Q  L  F  H  G  V  Y  I  F  S   : F  I  A  R  L  S  K  G  I  *  E  T  G  R  S  *  V  L  A  F  T  L  L  Q  L  Q  K  Q  E  R  W :   S  V  F  A  P  T  P  F  G  L  *  K  Q  D  C  N  F  R  L  L  I  R  F  V  H  T  P  D  F  M  :  M  L  *  E  R  *  S  K  K  K  D  G  G  H  C  T  R  G  L  C  Q  A  Y  F  * :   L  H  M  V  L  F  S  S  R  H  M  R  N  S  A  K  S  F  L  A  R  K  L  R  R  M  K  T  L  L  P  Q  L  L  T  C  W :   I  Q  L  T  M  Q  H  *  E  L  L  L  S  W  Q  P  L  L  Q  H  T  H  F  R :   L  S  D  L  D  C  S :   N  D  Q  V  R  L  E  F  Q  D  T  W  I  A  G  M  L  *  R  K  L  Q   : G  L  R  V  Y  A  A  F  T  E  V  S  Q  Q  T  C  *  K  M  P  L  P  L  Q  L  P  S  L  S  M  R  M  S  *  T  C  *  N  C  L  G  K  S  I  S  S  F  T  S  F  L  P  P  I  S  C  C  S  N  *  D  S  T  P  L  K  L  F  L  E  E  V  Y  S  Q  I  *  Q  E  Y  K  N  R  N  K  I  S  L  K  R  M  *  T  G  D  N  I  M  A  G  V  V  *  L  Y  Y  I  S  R  L  C  N  L  *  E  K  N  N  L  F  R  L </first_frame>
            <second_frame>  E  K  H  T  N  N  H  Q  I  V  Q  F  D  T  R  R  L  P  Q  L  L  L  Y  I  W  R  R  E  R  D  Y  S  N  R :   R  K  L  L  T  C  W  T  S  P  V  G  Q  Y  N  T  L  S  S  A  Q  E  G  P  P  H  F  F  L  H  R  R  Q  K  E  K  R  W  E  Q  G  G  K  E  A  N  G  *  *  S  H  E  K  D  G  S  F  A  I  G  R  L  G  M  G  K  C  H  R  R  C  C  C  R  P  C  H  C  H  I  L  S  S  P  *  C  C  S  H  P  V  P  G :   L  R  W  K  N  L  Q  C  P  G  L  S  E  H  S  S  R  F  V  C  H  C  S  K  *   : G  S  *  R  T  L  C  W  L  L  P  C  C  S  W  V  N  Y  F  M  G  F  I  F  F  L  :  L  *  Q  G  *  A  K  V  S  K  K  Q  G  G  A  E  S  W  P  S  P  C  F  S  C  R  S  R  S  A   : G  L  S  L  H  Q  P  H  L  A  C  E  N  K  I  A  T  S  D  S  *  S  D  S  S  I  H  R  I  S  * :   C  F  K  N  D  N  Q  R  R  R  M  E  G  T  V  Q  G  A  Y  A  K  P  I  S   : D  Y  T  W  C  Y  S  V  H  G  I  *  G  I  P  Q  S  H  S  *  L  E  S  S  G  E  *  K  P  S  C  H  S  C  *  L  V   : G  F  S  *  L  C  N  T  R  S  F  F  *  V  G  S  H  S  Y  N  I  P  I  S   : G  C  P  I  S  I  A   : A  T  T  K  Y  D  W  S  S  K  I  H  G  *  L  A  C  C  E  G  N  C  K  :  V  *  G  F  T  R  L  L  Q  R  Y  H  S  K  R  V  E  K  C  P  C  R  F  N  Y  L  H  C  L  *  E  C  P  K  P  A  K  I  V  *  E  R  V  L  V  L  L  H  P  F  C  L  P  F  L  V  V  A  I  R  I  L  H  H  *  N  Y  F  W  K  K  Y  T  L  R  F  D  R  S  T  K  I  E  T  R  Y  H  *  R  E  C  E  Q  E  T  I  *  W  L  V  W  C  N  C  T  I  F  L  V  F  V  I  Y  E  K  R  I  I  F  L  D   </second_frame>
            <third_frame>   K  S  T  R  T  I  I  R  *  Y  N  L  I  R  D  D  S  H  N  F  Y  Y  I  Y  G  D  A  K  E  T  I  L  I   : G  A  S  C  *  H  V  G  R  H  Q  *  V  N  T  T  P  F  R  L  R  R  K  A  R  L  I  S  F  C  I  D  G  K  K  K  S  V  G  N  K  G  E  R  K  P  T  V  D  R  A  M  K  K  M  A  A  L  P  S  A  D  W  E  W  E  N  A  T  A  G  A  A  A  G  L  A  T  V  T  F  S  H  P  L  D  V  V  R  T  R  F  Q   : V  Y  D  G  R  I  S  N  V  P  A  Y  R  N  T  P  H  A  L  F  A  I  A  R  S  E  :  G  L  R  G  L  Y  A  G  F  Y  P  A  V  L  G  S  T  I  S  W  G  L  Y  F  F  F :   Y  S  K  A  K  Q  R  Y  L  R  N  R  E  E  L  S  P  G  L  H  L  A  S  A  A  E  A  G  A  L  :  V  C  L  C  T  N  P  I  W  L  V  K  T  R  L  Q  L  Q  T  P  N  Q  I  R  P  Y  T  G  F  H   : D  A  L  R  T  I  I  K  E  E  G  W  R  A  L  Y  K  G  L  M  P  S  L  F  L  :  I  T  H  G  A  I  Q  F  T  A  Y  E  E  F  R  K  V  I  L  S  S  K  A  Q  E  N  E  N  P  L  A  T  A  A  D  L  L  :  D  S  V  D  Y  A  T  L  G  A  S  S  K  L  A  A  T  L  T  T  Y  P  F  Q  :  V  V  R  S  R  L  Q  :  Q  R  P  S  T  T  G  V  P  R  Y  M  D  S  W  H  V  V  K  E  T  A  R :   F  E  G  L  R  G  F  Y  R  G  I  T  A  N  V  L  K  N  A  P  A  A  S  I  T  F  I  V  Y  E  N  V  L  N  L  L  K  L  S  R  K  E  Y  *  F  F  Y  I  L  F  A  S  H  F  L  L  *  Q  L  G  F  Y  T  I  E  T  I  F  G  R  S  I  L  S  D  L  T  G  V  Q  K  *  K  Q  D  I  I  K  E  N  V  N  R  R  Q  Y  N  G  W  C  G  V  I  V  L  Y  F  S  S  L  *  F  M  R  K  E  *  S  F  *  T  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0025E22.1" strand="+"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="26565" stop="26808"/>
                    <exon start="26895" stop="26971"/>
                    <exon start="27912" stop="27988"/>
                    <exon start="29051" stop="29141"/>
                    <exon start="29706" stop="29796"/>
                    <exon start="30089" stop="30162"/>
                    <exon start="30367" stop="30477"/>
                    <exon start="31384" stop="31455"/>
                    <exon start="31631" stop="31651"/>
                    <exon start="31774" stop="31841"/>
                    <exon start="32315" stop="32447"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1056</number_coding_nucleotides>
                  <number_encoded_amino_acids>352</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VNTTPFRLRRKARLISFCIDGKKKSVGNKGERKPTVDRAMKKMAALPSADWEWENATAGAAAGLATVTFSHPLDVVRTRFQVYDGRISNVPAYRNTPHALFAIARSEGLRGLYAGFYPAVLGSTISWGLYFFFYSKAKQRYLRNREELSPGLHLASAAEAGALVCLCTNPIWLVKTRLQLQTPNQIRPYTGFHDALRTIIKEEGWRALYKGLMPSLFLITHGAIQFTAYEEFRKVILSSKAQENENPLATAADLLDSVDYATLGASSKLAATLTTYPFQVVRSRLQQRPSTTGVPRYMDSWHVVKETARFEGLRGFYRGITANVLKNAPAASITFIVYENVLNLLKLSRKEY*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="+" PGL_start="33885" PGL_stop="36728"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="33885" e_stop="34697"/>
            <exon e_start="36321" e_stop="36728"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.931" acc_prob="0.985" e_score="0.999"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.999">
            <gDNA_exon_boundary e_start="33885" e_stop="34697" e_length="813"/>
          </exon>
          <intron i_serial="1" don_prob="0.931" acc_prob="0.985">
            <gDNA_intron_boundary i_start="34698" i_stop="36320" i_length="1623"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="36321" e_stop="36728" e_length="408"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33885" stop="34697"/>
              <exon start="36321" stop="36728"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U573581" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATTGTTTTTAAGTCATGGATAGCAATTCCATAACCTAAGGGGCCAAAGTGTATGCTAGTAGGCCTAAAACCTCACTTCCCCAACCTTGGTACTTCTCCCAGACGGCTTAAACCCGCCGCCGTAATCACTATCTCCGGCGCCGTTACAAAGTCCAAGCAGAAGTTCTTATGCTATAAGATTCTGTAATCATGAGGTGCTTTAATCGATTTATCAATCAATTGCTGTCTCGCCGTTCAAGAACTATTTCCACATATCAAACACCTTATGTGCATTCACGAATTCCACAGTCCAAGATTCAAAATTTATCCAAAACCCATTTCTACAGCTTCACTAAATCGTTAATTAGTTCAAATTTCACAACATCAGCTCAGGAGTCTAAGCCGGCCCCATCCGAGAGAGTATCTGCGATAGTCGATGAGATTTCGGGTCTAACGTTGCTGGAAGTATCGGATTTGGGGGAGGTTCTAAGGAAGAAAATGGGTATTGAAGAGATGCCTGTAATGGCAATGATGATGCCTGGAATGGGATTTAGTGCTGGAGGGATGAAGGGAAAGGGTGCAGGAGCTGCGGGAAAGACGGAGGAGAAGGCGGAGAAGACTGTGTTTGATCTGAAGCTTGAAGGGGGATTTGATGCCGGGGCAAAGATTAAGATTATCAAGGAAGTGAGATCTTTTACTGATCTGGGACTCAAGGAGGCTAAGGATTTGGTGGAAAAGGCTCCAGCTAGTTTGAAGAAAGGGGTTACGAAAGAGGAGGCTGAGAAAATTATTGAGAAGATGAAAGCGGTTGGAGCCAAAGTCACTATGGAGTGAG : ATCCCTTGATTGTATTTTTGCAACAAAGATCGGGAGCTAACAGGTCATGACTTTGAAAACACAATCTGCATTTGGTGATGCATCATGTTTGGAGGTTCGTGGTTACTCAAGGGCTAGCTTTTCTGTTTTGAAAATAAAGGAGACGGTGACTCTCCTAGGACATTGTAGAGCTATTTGGTTGAGAACTGACATCTTATAATGAATTCACGTTGTTATAGGTATGATAGATAGTGAGCTGAAAAAAACTGTGGTATATTTGCAACCATGGATTAGTTTCCAATTCAGTTTAGATCAGTTTGTACTCTTTTTAATTATTTAGGCTACAGTTGGTTTGAGATTATCCTGACAAGGTTGACACACATAGTGAACAAAGCTGGACTTGTCCGGTTCTAATTCACATTTCAAGCT</gDNA_template>
            <first_frame> I  V  F  K  S  W  I  A  I  P  *  P  K  G  P  K  C  M  L  V  G  L  K  P  H  F  P  N  L  G  T  S  P  R  R  L  K  P  A  A  V  I  T  I  S  G  A  V  T  K  S  K  Q  K  F  L  C  Y  K  I  L  *  S  *  G  A  L  I  D  L  S  I  N  C  C  L  A  V  Q  E  L  F  P  H  I  K  H  L  M  C  I  H  E  F  H  S  P  R  F  K  I  Y  P  K  P  I  S  T  A  S  L  N  R  *  L  V  Q  I  S  Q  H  Q  L  R  S  L  S  R  P  H  P  R  E  Y  L  R  *  S  M  R  F  R  V  *  R  C  W  K  Y  R  I  W  G  R  F  *  G  R  K  W  V  L  K  R  C  L  *  W  Q  *  *  C  L  E  W  D  L  V  L  E  G  *  R  E  R  V  Q  E  L  R  E  R  R  R  R  R  R  R  R  L  C  L  I  *  S  L  K  G  D  L  M  P  G  Q  R  L  R  L  S  R  K  *  D  L  L  L  I  W  D  S  R  R  L  R  I  W  W  K  R  L  Q  L  V  *  R  K  G  L  R  K  R  R  L  R  K  L  L  R  R  *  K  R  L  E  P  K  S  L  W  S  E  :  I  P  *  L  Y  F  C  N  K  D  R  E  L  T  G  H  D  F  E  N  T  I  C  I  W  *  C  I  M  F  G  G  S  W  L  L  K  G  *  L  F  C  F  E  N  K  G  D  G  D  S  P  R  T  L  *  S  Y  L  V  E  N  *  H  L  I  M  N  S  R  C  Y  R  Y  D  R  *  *  A  E  K  N  C  G  I  F  A  T  M  D  *  F  P  I  Q  F  R  S  V  C  T  L  F  N  Y  L  G  Y  S  W  F  E  I  I  L  T  R  L  T  H  I  V  N  K  A  G  L  V  R  F  *  F  T  F  Q  A </first_frame>
            <second_frame>  L  F  L  S  H  G  *  Q  F  H  N  L  R  G  Q  S  V  C  *  *  A  *  N  L  T  S  P  T  L  V  L  L  P  D  G  L  N  P  P  P  *  S  L  S  P  A  P  L  Q  S  P  S  R  S  S  Y  A  I  R  F  C  N  H  E  V  L  *  S  I  Y  Q  S  I  A  V  S  P  F  K  N  Y  F  H  I  S  N  T  L  C  A  F  T  N  S  T  V  Q  D  S  K  F  I  Q  N  P  F  L  Q  L  H  *  I  V  N  *  F  K  F  H  N  I  S  S  G  V  *  A  G  P  I  R  E  S  I  C  D  S  R  *  D  F  G  S  N  V  A  G  S  I  G  F  G  G  G  S  K  E  E  N  G  Y  *  R  D  A  C  N  G  N  D  D  A  W  N  G  I  *  C  W  R  D  E  G  K  G  C  R  S  C  G  K  D  G  G  E  G  G  E  D  C  V  *  S  E  A  *  R  G  I  *  C  R  G  K  D  *  D  Y  Q  G  S  E  I  F  Y  *  S  G  T  Q  G  G  *  G  F  G  G  K  G  S  S  *  F  E  E  R  G  Y  E  R  G  G  *  E  N  Y  *  E  D  E  S  G  W  S  Q  S  H  Y  G  V  R :   S  L  D  C  I  F  A  T  K  I  G  S  *  Q  V  M  T  L  K  T  Q  S  A  F  G  D  A  S  C  L  E  V  R  G  Y  S  R  A  S  F  S  V  L  K  I  K  E  T  V  T  L  L  G  H  C  R  A  I  W  L  R  T  D  I  L  *  *  I  H  V  V  I  G  M  I  D  S  E  L  K  K  T  V  V  Y  L  Q  P  W  I  S  F  Q  F  S  L  D  Q  F  V  L  F  L  I  I  *  A  T  V  G  L  R  L  S  *  Q  G  *  H  T  *  *  T  K  L  D  L  S  G  S  N  S  H  F  K   </second_frame>
            <third_frame>   C  F  *  V  M  D  S  N  S  I  T  *  G  A  K  V  Y  A  S  R  P  K  T  S  L  P  Q  P  W  Y  F  S  Q  T  A  *  T  R  R  R  N  H  Y  L  R  R  R  Y  K  V  Q  A  E  V  L  M  L  *  D  S  V  I  M  R  C  F  N  R  F  I  N  Q  L  L  S  R  R  S  R  T  I  S  T  Y  Q  T  P  Y  V  H  S  R  I  P  Q  S  K  I  Q  N  L  S  K  T  H  F  Y  S  F  T  K  S  L  I  S  S  N  F  T  T  S  A  Q  E  S  K  P  A  P  S  E  R  V  S  A  I  V  D  E  I  S  G  L  T  L  L  E  V  S  D  L  G  E  V  L  R  K  K  M  G  I  E  E  M  P  V  M  A  M  M  M  P  G  M  G  F  S  A  G  G  M  K  G  K  G  A  G  A  A  G  K  T  E  E  K  A  E  K  T  V  F  D  L  K  L  E  G  G  F  D  A  G  A  K  I  K  I  I  K  E  V  R  S  F  T  D  L  G  L  K  E  A  K  D  L  V  E  K  A  P  A  S  L  K  K  G  V  T  K  E  E  A  E  K  I  I  E  K  M  K  A  V  G  A  K  V  T  M  E  *   : D  P  L  I  V  F  L  Q  Q  R  S  G  A  N  R  S  *  L  *  K  H  N  L  H  L  V  M  H  H  V  W  R  F  V  V  T  Q  G  L  A  F  L  F  *  K  *  R  R  R  *  L  S  *  D  I  V  E  L  F  G  *  E  L  T  S  Y  N  E  F  T  L  L  *  V  *  *  I  V  S  *  K  K  L  W  Y  I  C  N  H  G  L  V  S  N  S  V  *  I  S  L  Y  S  F  *  L  F  R  L  Q  L  V  *  D  Y  P  D  K  V  D  T  H  S  E  Q  S  W  T  C  P  V  L  I  H  I  S  S  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0025E22.1" strand="+"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="34061" stop="34696"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>633</number_coding_nucleotides>
                  <number_encoded_amino_acids>211</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DSVIMRCFNRFINQLLSRRSRTISTYQTPYVHSRIPQSKIQNLSKTHFYSFTKSLISSNFTTSAQESKPAPSERVSAIVDEISGLTLLEVSDLGEVLRKKMGIEEMPVMAMMMPGMGFSAGGMKGKGAGAAGKTEEKAEKTVFDLKLEGGFDAGAKIKIIKEVRSFTDLGLKEAKDLVEKAPASLKKGVTKEEAEKIIEKMKAVGAKVTME*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="-" PGL_start="43320" PGL_stop="42956"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="43320" e_stop="42956"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.967"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.967">
            <gDNA_exon_boundary e_start="43320" e_stop="42956" e_length="365"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43320" stop="42956"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U583440" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATAGTATCACGGAACAGATTTAACGATTATCTCCCTCCGTTCCACCGGAAACTCAAATTCTTCTTCTCTAAGAAAGCAATTCCGATGGGTTCTCGTTCAAAATTAAGCCCCAGTAGCTTATCGATGAGAAGAACAAGAAGATCTACCCCTCACAAAAAAACATGCAAATCTCAAAATCTTGTTGACGTTGACGGCGGTTCCGTTTCTGAAAAATTGGAGGCTCTGAAGCAGTTAATCCCAGCCAACTATGGTGAAATCAAAGCGGACCAGTTGTTCAAAGAAACTGCTGATTACATTGTTCTTCTCAGAACTCAGGTCTTCGTTTTACAGAAACTCGTCGATTTTTATGGATCAAATACCGATCA</gDNA_template>
            <first_frame> I  V  S  R  N  R  F  N  D  Y  L  P  P  F  H  R  K  L  K  F  F  F  S  K  K  A  I  P  M  G  S  R  S  K  L  S  P  S  S  L  S  M  R  R  T  R  R  S  T  P  H  K  K  T  C  K  S  Q  N  L  V  D  V  D  G  G  S  V  S  E  K  L  E  A  L  K  Q  L  I  P  A  N  Y  G  E  I  K  A  D  Q  L  F  K  E  T  A  D  Y  I  V  L  L  R  T  Q  V  F  V  L  Q  K  L  V  D  F  Y  G  S  N  T  D   </first_frame>
            <second_frame>  *  Y  H  G  T  D  L  T  I  I  S  L  R  S  T  G  N  S  N  S  S  S  L  R  K  Q  F  R  W  V  L  V  Q  N  *  A  P  V  A  Y  R  *  E  E  Q  E  D  L  P  L  T  K  K  H  A  N  L  K  I  L  L  T  L  T  A  V  P  F  L  K  N  W  R  L  *  S  S  *  S  Q  P  T  M  V  K  S  K  R  T  S  C  S  K  K  L  L  I  T  L  F  F  S  E  L  R  S  S  F  Y  R  N  S  S  I  F  M  D  Q  I  P  I  </second_frame>
            <third_frame>   S  I  T  E  Q  I  *  R  L  S  P  S  V  P  P  E  T  Q  I  L  L  L  *  E  S  N  S  D  G  F  S  F  K  I  K  P  Q  *  L  I  D  E  K  N  K  K  I  Y  P  S  Q  K  N  M  Q  I  S  K  S  C  *  R  *  R  R  F  R  F  *  K  I  G  G  S  E  A  V  N  P  S  Q  L  W  *  N  Q  S  G  P  V  V  Q  R  N  C  *  L  H  C  S  S  Q  N  S  G  L  R  F  T  E  T  R  R  F  L  W  I  K  Y  R  S </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0025E22.1" strand="-"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="43320" stop="42958"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>363</number_coding_nucleotides>
                  <number_encoded_amino_acids>121</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IVSRNRFNDYLPPFHRKLKFFFSKKAIPMGSRSKLSPSSLSMRRTRRSTPHKKTCKSQNLVDVDGGSVSEKLEALKQLIPANYGEIKADQLFKETADYIVLLRTQVFVLQKLVDFYGSNTD</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="+" PGL_start="51131" PGL_stop="53146"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="51131" e_stop="51206"/>
            <exon e_start="52344" e_stop="53146"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.894" e_score="1.000"/>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="51131" e_stop="51206" e_length="76"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.894">
            <gDNA_intron_boundary i_start="51207" i_stop="52343" i_length="1137"/>
          </intron>
          <exon e_serial="2" e_score="0.996">
            <gDNA_exon_boundary e_start="52344" e_stop="53146" e_length="803"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="51131" stop="51206"/>
              <exon start="52344" stop="53146"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U568044" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TAATCATTTTCTCTTCTGATTCCGGCGACGATTACCGGGGAATGTTTCCCGATGACGGTCTGGTTTCTTTAAAGAG : ATAAGTCCATGCTTCCGAGTAATTGGCTAGGTGAAGAATTATCCTTTCTCTGAAGTGCAGTATGATTGCATCAACTGCAAGGCATGAGAGCTGATTGCTTTGATCTACCAAAATCTTTATAAAGAGCTGAAAAGCTGATATATTCCAGCTGGTTTCCTTGTTGTGCACAAGATGGCGTGTGAAGAAATTCTGAAGGCTGTATTCCCATTTCTGGAGGGCATTGAACTGGCTACATGTATGATAGTGTGCAAACAGTGGCGAGATATTGCACGAGATGATTACTTCTGGAAATGTCTTTGTTCTAAAAAATGGCCATCTATTTGCAAACGGTCATCACCTCCCACTGTAACATACTATAATCTATTTCAGAACTTCCATAAACGTCCATACCGCCGGACTGTTCTCCCTCCTAAACTTTCCTTCAGTGACTTAGAGTTCTACATTGACATATGGACTGAAGAGAAGATAATATTTTCAGATGTGGTCCCAGGGCCTGTTCTTCAGAAGGGAATCTGGATCCCACCTCCCGGAATCTGTGATGTGCTTAGGTTCCACTTGGAAGGGCCTGAATACAAGATGACTCTACCTGTGGAACCAAGATTTACAATTCCTTTGTGCCAGACAGTCAGCGTCTCTGTGCTTGTTGGGCGCAAAGATACAAATAAAGTTGCATGCATTATCAAGAAGTCCCTTTTTGATTATATAGATCGAACAGCATATCGGGCTTTAGCTTATGACTATCTTGACTTCTCCTCTCCCATGTGCTTGTTTGTATCGGGTGTTCGGGCTTGGATATCTTTGCT</gDNA_template>
            <first_frame> *  S  F  S  L  L  I  P  A  T  I  T  G  E  C  F  P  M  T  V  W  F  L  *  R   : D  K  S  M  L  P  S  N  W  L  G  E  E  L  S  F  L  *  S  A  V  *  L  H  Q  L  Q  G  M  R  A  D  C  F  D  L  P  K  S  L  *  R  A  E  K  L  I  Y  S  S  W  F  P  C  C  A  Q  D  G  V  *  R  N  S  E  G  C  I  P  I  S  G  G  H  *  T  G  Y  M  Y  D  S  V  Q  T  V  A  R  Y  C  T  R  *  L  L  L  E  M  S  L  F  *  K  M  A  I  Y  L  Q  T  V  I  T  S  H  C  N  I  L  *  S  I  S  E  L  P  *  T  S  I  P  P  D  C  S  P  S  *  T  F  L  Q  *  L  R  V  L  H  *  H  M  D  *  R  E  D  N  I  F  R  C  G  P  R  A  C  S  S  E  G  N  L  D  P  T  S  R  N  L  *  C  A  *  V  P  L  G  R  A  *  I  Q  D  D  S  T  C  G  T  K  I  Y  N  S  F  V  P  D  S  Q  R  L  C  A  C  W  A  Q  R  Y  K  *  S  C  M  H  Y  Q  E  V  P  F  *  L  Y  R  S  N  S  I  S  G  F  S  L  *  L  S  *  L  L  L  S  H  V  L  V  C  I  G  C  S  G  L  D  I  F  A </first_frame>
            <second_frame>  N  H  F  L  F  *  F  R  R  R  L  P  G  N  V  S  R  *  R  S  G  F  F  K  E  :  I  S  P  C  F  R  V  I  G  *  V  K  N  Y  P  F  S  E  V  Q  Y  D  C  I  N  C  K  A  *  E  L  I  A  L  I  Y  Q  N  L  Y  K  E  L  K  S  *  Y  I  P  A  G  F  L  V  V  H  K  M  A  C  E  E  I  L  K  A  V  F  P  F  L  E  G  I  E  L  A  T  C  M  I  V  C  K  Q  W  R  D  I  A  R  D  D  Y  F  W  K  C  L  C  S  K  K  W  P  S  I  C  K  R  S  S  P  P  T  V  T  Y  Y  N  L  F  Q  N  F  H  K  R  P  Y  R  R  T  V  L  P  P  K  L  S  F  S  D  L  E  F  Y  I  D  I  W  T  E  E  K  I  I  F  S  D  V  V  P  G  P  V  L  Q  K  G  I  W  I  P  P  P  G  I  C  D  V  L  R  F  H  L  E  G  P  E  Y  K  M  T  L  P  V  E  P  R  F  T  I  P  L  C  Q  T  V  S  V  S  V  L  V  G  R  K  D  T  N  K  V  A  C  I  I  K  K  S  L  F  D  Y  I  D  R  T  A  Y  R  A  L  A  Y  D  Y  L  D  F  S  S  P  M  C  L  F  V  S  G  V  R  A  W  I  S  L   </second_frame>
            <third_frame>   I  I  F  S  S  D  S  G  D  D  Y  R  G  M  F  P  D  D  G  L  V  S  L  K  R :   *  V  H  A  S  E  *  L  A  R  *  R  I  I  L  S  L  K  C  S  M  I  A  S  T  A  R  H  E  S  *  L  L  *  S  T  K  I  F  I  K  S  *  K  A  D  I  F  Q  L  V  S  L  L  C  T  R  W  R  V  K  K  F  *  R  L  Y  S  H  F  W  R  A  L  N  W  L  H  V  *  *  C  A  N  S  G  E  I  L  H  E  M  I  T  S  G  N  V  F  V  L  K  N  G  H  L  F  A  N  G  H  H  L  P  L  *  H  T  I  I  Y  F  R  T  S  I  N  V  H  T  A  G  L  F  S  L  L  N  F  P  S  V  T  *  S  S  T  L  T  Y  G  L  K  R  R  *  Y  F  Q  M  W  S  Q  G  L  F  F  R  R  E  S  G  S  H  L  P  E  S  V  M  C  L  G  S  T  W  K  G  L  N  T  R  *  L  Y  L  W  N  Q  D  L  Q  F  L  C  A  R  Q  S  A  S  L  C  L  L  G  A  K  I  Q  I  K  L  H  A  L  S  R  S  P  F  L  I  I  *  I  E  Q  H  I  G  L  *  L  M  T  I  L  T  S  P  L  P  C  A  C  L  Y  R  V  F  G  L  G  Y  L  C  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0025E22.1" strand="+"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="52482" stop="53144"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>663</number_coding_nucleotides>
                  <number_encoded_amino_acids>221</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>YIPAGFLVVHKMACEEILKAVFPFLEGIELATCMIVCKQWRDIARDDYFWKCLCSKKWPSICKRSSPPTVTYYNLFQNFHKRPYRRTVLPPKLSFSDLEFYIDIWTEEKIIFSDVVPGPVLQKGIWIPPPGICDVLRFHLEGPEYKMTLPVEPRFTIPLCQTVSVSVLVGRKDTNKVACIIKKSLFDYIDRTAYRALAYDYLDFSSPMCLFVSGVRAWISL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="-" PGL_start="67592" PGL_stop="54252"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="67592" e_stop="67456"/>
            <exon e_start="67089" e_stop="67016"/>
            <exon e_start="65510" e_stop="65445"/>
            <exon e_start="65303" e_stop="65232"/>
            <exon e_start="63879" e_stop="63807"/>
            <exon e_start="63377" e_stop="63340"/>
            <exon e_start="63257" e_stop="63150"/>
            <exon e_start="60506" e_stop="60387"/>
            <exon e_start="60294" e_stop="60214"/>
            <exon e_start="60097" e_stop="60029"/>
            <exon e_start="57985" e_stop="57908"/>
            <exon e_start="57804" e_stop="57640"/>
            <exon e_start="56654" e_stop="56547"/>
            <exon e_start="55370" e_stop="55302"/>
            <exon e_start="55193" e_stop="54877"/>
            <exon e_start="54685" e_stop="54252"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.995" acc_prob="0.937" e_score="0.993"/>
          <exon-intron don_prob="0.998" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.973" acc_prob="0.966" e_score="1.000"/>
          <exon-intron don_prob="0.979" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.992" acc_prob="0.809" e_score="1.000"/>
          <exon-intron don_prob="0.983" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.976" acc_prob="0.525" e_score="1.000"/>
          <exon-intron don_prob="0.895" acc_prob="0.573" e_score="1.000"/>
          <exon-intron don_prob="0.989" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.974" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.944" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.957" e_score="0.986"/>
          <exon-intron don_prob="0.979" acc_prob="0.968" e_score="1.000"/>
          <exon-only e_score="0.988"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.993">
            <gDNA_exon_boundary e_start="67592" e_stop="67456" e_length="137"/>
          </exon>
          <intron i_serial="1" don_prob="0.995" acc_prob="0.937">
            <gDNA_intron_boundary i_start="67455" i_stop="67090" i_length="366"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="67089" e_stop="67016" e_length="74"/>
          </exon>
          <intron i_serial="2" don_prob="0.998" acc_prob="0.998">
            <gDNA_intron_boundary i_start="67015" i_stop="65511" i_length="1505"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="65510" e_stop="65445" e_length="66"/>
          </exon>
          <intron i_serial="3" don_prob="0.973" acc_prob="0.966">
            <gDNA_intron_boundary i_start="65444" i_stop="65304" i_length="141"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="65303" e_stop="65232" e_length="72"/>
          </exon>
          <intron i_serial="4" don_prob="0.979" acc_prob="0.999">
            <gDNA_intron_boundary i_start="65231" i_stop="63880" i_length="1352"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="63879" e_stop="63807" e_length="73"/>
          </exon>
          <intron i_serial="5" don_prob="0.998" acc_prob="0.993">
            <gDNA_intron_boundary i_start="63806" i_stop="63378" i_length="429"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="63377" e_stop="63340" e_length="38"/>
          </exon>
          <intron i_serial="6" don_prob="0.998" acc_prob="0.993">
            <gDNA_intron_boundary i_start="63339" i_stop="63258" i_length="82"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="63257" e_stop="63150" e_length="108"/>
          </exon>
          <intron i_serial="7" don_prob="0.992" acc_prob="0.809">
            <gDNA_intron_boundary i_start="63149" i_stop="60507" i_length="2643"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="60506" e_stop="60387" e_length="120"/>
          </exon>
          <intron i_serial="8" don_prob="0.983" acc_prob="0.995">
            <gDNA_intron_boundary i_start="60386" i_stop="60295" i_length="92"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="60294" e_stop="60214" e_length="81"/>
          </exon>
          <intron i_serial="9" don_prob="0.976" acc_prob="0.525">
            <gDNA_intron_boundary i_start="60213" i_stop="60098" i_length="116"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="60097" e_stop="60029" e_length="69"/>
          </exon>
          <intron i_serial="10" don_prob="0.895" acc_prob="0.573">
            <gDNA_intron_boundary i_start="60028" i_stop="57986" i_length="2043"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="57985" e_stop="57908" e_length="78"/>
          </exon>
          <intron i_serial="11" don_prob="0.989" acc_prob="1.000">
            <gDNA_intron_boundary i_start="57907" i_stop="57805" i_length="103"/>
          </intron>
          <exon e_serial="12" e_score="1.000">
            <gDNA_exon_boundary e_start="57804" e_stop="57640" e_length="165"/>
          </exon>
          <intron i_serial="12" don_prob="0.974" acc_prob="0.997">
            <gDNA_intron_boundary i_start="57639" i_stop="56655" i_length="985"/>
          </intron>
          <exon e_serial="13" e_score="1.000">
            <gDNA_exon_boundary e_start="56654" e_stop="56547" e_length="108"/>
          </exon>
          <intron i_serial="13" don_prob="0.944" acc_prob="0.998">
            <gDNA_intron_boundary i_start="56546" i_stop="55371" i_length="1176"/>
          </intron>
          <exon e_serial="14" e_score="0.986">
            <gDNA_exon_boundary e_start="55370" e_stop="55302" e_length="69"/>
          </exon>
          <intron i_serial="14" don_prob="1.000" acc_prob="0.957">
            <gDNA_intron_boundary i_start="55301" i_stop="55194" i_length="108"/>
          </intron>
          <exon e_serial="15" e_score="1.000">
            <gDNA_exon_boundary e_start="55193" e_stop="54877" e_length="317"/>
          </exon>
          <intron i_serial="15" don_prob="0.979" acc_prob="0.968">
            <gDNA_intron_boundary i_start="54876" i_stop="54686" i_length="191"/>
          </intron>
          <exon e_serial="16" e_score="0.988">
            <gDNA_exon_boundary e_start="54685" e_stop="54252" e_length="434"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="67592" stop="67456"/>
              <exon start="67089" stop="67016"/>
              <exon start="65510" stop="65445"/>
              <exon start="65303" stop="65232"/>
              <exon start="63879" stop="63807"/>
              <exon start="63377" stop="63340"/>
              <exon start="63257" stop="63150"/>
              <exon start="60506" stop="60387"/>
              <exon start="60294" stop="60214"/>
              <exon start="60097" stop="60029"/>
              <exon start="57985" stop="57908"/>
              <exon start="57804" stop="57640"/>
              <exon start="56654" stop="56547"/>
              <exon start="55370" stop="55302"/>
              <exon start="55193" stop="54877"/>
              <exon start="54685" stop="54252"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U574382" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CCCAACTTCTGCATAGAAAAATAGTACGATGATATGCAGGGAAAACTGAACTCCGAAACGACAACTGATTTGAGGGCTTAGGGTTCCGACCGAATCACTCTCGGATTGAGAATTCATTGGAGACTTCATTTTTTCAG : AACAGGAAATGAAAGGGACAGAGATTTTTGTTGGTGGTTTGGCCCGTACTACTACTGAAAGCAAAATTCACGAG : GTATTTTCTTCATGCGGTGAGATTGTGGAAATAAGGTTGATAAAAGACCAGATAGGCAATGCCAAG : GGGTTCTGCTTTGTACGATTTGCAACAAAATATGCTGCTGACAAAGCTCTGAAGGAAAAATCTGGATATGTG : CTAGATGGGAAGAAAATTGGGATTCGCCCCTCAGTTGAGCAGGACACACTATTTCTTGGAAATCTTAACAAAG : GTTGGGGTGCTGAGGAATTTGAGAGTATTGTGCGCCAG : GTTTTTCCAGATGTTACATCTGTTGATCTTGCAATTCTTGGAGATGTCCAACTTGGTCAGAAGCAACGGAATCGGGGATTTGCCTTTGTGAAATTTTCATCTCATGCT : GCTGCAGCTCGTGCTTTACGGGTAGGCTCCCAATCTGATTTTCTCATCGGTGGCAACTTGCATCCATCTGTACAGTGGGCTGAGGAGGAATCTGAAGTTGATCCTAATGAACTTGCTCAG : ATCAAAGTAGCCTTTGTCAGAAATGTACCTCCTGGTGCTGATGAAGATTACTTGAAGAAGCTCTTTCAGCCCTTTGGCAAT : GTAGAGAAGGTTACTCTCTCCAGGAAGGGTAGTTCCACCATTGGATTTGTTTACTTCGATAAGCGATCT : GATCTTGACAATGCTATTAAAGGATTGAATGAGAAAACTGTACAAGGGCCAAGGGGAGGTCCCTCAAGCAAGATTCAG : GTCGAAGTTGCGAGGCCAACTGATAAGAACAGGAAACGAGGTCGTGAGGATCAAAAAATGTCCAGTAACATTGAGAGTCATTCCAAGCTTTTGAAGGATGATCCAAATGTTGAGATGGTTGGGGGTCCTAAATCAAAAGCTCAACCGGTGATGCATCTATCAGAT : GAAATGGATTATTTGGATCCTTATGAAGCTGCTGTAATTGCACTACCTGTGCTTGTCAAGGAGCGTTTAGTTCGGATCTTGCGGCTTGGTATTGCTACTAGATATGAT : ATAGATGTTGTCAACCTAACCAGTCTTAAGATGTTGCCCGAGTCAGCTGCCATATCTGTTCTTGACCAG : CTCATGTGGTCTGAAGCTGATATGCAGAACAAGGGAGGATTTTTAGCTTCATTAATTTCTAAAGTATGTTCTGCAGAGTGCAGATAAGCATCGAAAGTGTTATCTTTGTTAGTACTATAATATTTTGCGCGCTTTATTTAACAAAGTCTTCTCTGGAAATAGCAGCAGGTTGAAAAGCTGGGATTGAAACAGTTTGATAGCAAGTCAAGGGTAGAAGATGTTGCCTTGAGGGTACCAGAACCAGACAGCTTCTCTACAAGAGTTCGTTTGCCACATCTAGATTCATATGCCTCCCGAGTACCCTTGCCCATGGCTAG : GGCTGATGTTTACACATCTCGCTATTCAGCGTATTTAGATCCCTATCAATCTGGTCGGGTGACAACAGAGAGGATGGAGGAAGCAAGTTCCCATTTGCAGGGGACTTCACTTACGTATGGTCAGGTGACAACGAGGATGGAGGAAGCAGGTTCTATTCACAAGAAAAGGATGGAGGAAGCAAATCCCACTTTGCAGTCGTTCCTCTCTGGCGGGGTGACTAAAAGGAGGATGGAGGAACCAAGTCCTTTGCAGGCAACATCCCTTCCATCTGGTCGAGTATCAAGGATGGATGAAGCAGGTCCCACTTTTCAGGCATCTTGGAGTCCTTCAGCTGCTGCTGACAGAGTTGGACTTCATTCACGCATTACCCCAACTTCTGATCATCAACAGACTCGACCACGGATCAGGTTTGATCCCTTCACTGGTGAGCCAT</gDNA_template>
            <first_frame> P  N  F  C  I  E  K  *  Y  D  D  M  Q  G  K  L  N  S  E  T  T  T  D  L  R  A  *  G  S  D  R  I  T  L  G  L  R  I  H  W  R  L  H  F  F  R :   T  G  N  E  R  D  R  D  F  C  W  W  F  G  P  Y  Y  Y  *  K  Q  N  S  R   : G  I  F  F  M  R  *  D  C  G  N  K  V  D  K  R  P  D  R  Q  C  Q   : G  V  L  L  C  T  I  C  N  K  I  C  C  *  Q  S  S  E  G  K  I  W  I  C   : A  R  W  E  E  N  W  D  S  P  L  S  *  A  G  H  T  I  S  W  K  S  *  Q  R :   L  G  C  *  G  I  *  E  Y  C  A  P   : G  F  S  R  C  Y  I  C  *  S  C  N  S  W  R  C  P  T  W  S  E  A  T  E  S  G  I  C  L  C  E  I  F  I  S  C   : C  C  S  S  C  F  T  G  R  L  P  I  *  F  S  H  R  W  Q  L  A  S  I  C  T  V  G  *  G  G  I  *  S  *  S  *  *  T  C  S   : D  Q  S  S  L  C  Q  K  C  T  S  W  C  *  *  R  L  L  E  E  A  L  S  A  L  W  Q   : C  R  E  G  Y  S  L  Q  E  G  *  F  H  H  W  I  C  L  L  R  *  A  I   : *  S  *  Q  C  Y  *  R  I  E  *  E  N  C  T  R  A  K  G  R  S  L  K  Q  D  S   : G  R  S  C  E  A  N  *  *  E  Q  E  T  R  S  *  G  S  K  N  V  Q  *  H  *  E  S  F  Q  A  F  E  G  *  S  K  C  *  D  G  W  G  S  *  I  K  S  S  T  G  D  A  S  I  R   : *  N  G  L  F  G  S  L  *  S  C  C  N  C  T  T  C  A  C  Q  G  A  F  S  S  D  L  A  A  W  Y  C  Y  *  I  *   : Y  R  C  C  Q  P  N  Q  S  *  D  V  A  R  V  S  C  H  I  C  S  *  P   : A  H  V  V  *  S  *  Y  A  E  Q  G  R  I  F  S  F  I  N  F  *  S  M  F  C  R  V  Q  I  S  I  E  S  V  I  F  V  S  T  I  I  F  C  A  L  Y  L  T  K  S  S  L  E  I  A  A  G  *  K  A  G  I  E  T  V  *  *  Q  V  K  G  R  R  C  C  L  E  G  T  R  T  R  Q  L  L  Y  K  S  S  F  A  T  S  R  F  I  C  L  P  S  T  L  A  H  G  *  :  G  *  C  L  H  I  S  L  F  S  V  F  R  S  L  S  I  W  S  G  D  N  R  E  D  G  G  S  K  F  P  F  A  G  D  F  T  Y  V  W  S  G  D  N  E  D  G  G  S  R  F  Y  S  Q  E  K  D  G  G  S  K  S  H  F  A  V  V  P  L  W  R  G  D  *  K  E  D  G  G  T  K  S  F  A  G  N  I  P  S  I  W  S  S  I  K  D  G  *  S  R  S  H  F  S  G  I  L  E  S  F  S  C  C  *  Q  S  W  T  S  F  T  H  Y  P  N  F  *  S  S  T  D  S  T  T  D  Q  V  *  S  L  H  W  *  A   </first_frame>
            <second_frame>  P  T  S  A  *  K  N  S  T  M  I  C  R  E  N  *  T  P  K  R  Q  L  I  *  G  L  R  V  P  T  E  S  L  S  D  *  E  F  I  G  D  F  I  F  S   : E  Q  E  M  K  G  T  E  I  F  V  G  G  L  A  R  T  T  T  E  S  K  I  H  E  :  V  F  S  S  C  G  E  I  V  E  I  R  L  I  K  D  Q  I  G  N  A  K  :  G  F  C  F  V  R  F  A  T  K  Y  A  A  D  K  A  L  K  E  K  S  G  Y  V  :  L  D  G  K  K  I  G  I  R  P  S  V  E  Q  D  T  L  F  L  G  N  L  N  K   : G  W  G  A  E  E  F  E  S  I  V  R  Q  :  V  F  P  D  V  T  S  V  D  L  A  I  L  G  D  V  Q  L  G  Q  K  Q  R  N  R  G  F  A  F  V  K  F  S  S  H  A  :  A  A  A  R  A  L  R  V  G  S  Q  S  D  F  L  I  G  G  N  L  H  P  S  V  Q  W  A  E  E  E  S  E  V  D  P  N  E  L  A  Q  :  I  K  V  A  F  V  R  N  V  P  P  G  A  D  E  D  Y  L  K  K  L  F  Q  P  F  G  N  :  V  E  K  V  T  L  S  R  K  G  S  S  T  I  G  F  V  Y  F  D  K  R  S  :  D  L  D  N  A  I  K  G  L  N  E  K  T  V  Q  G  P  R  G  G  P  S  S  K  I  Q  :  V  E  V  A  R  P  T  D  K  N  R  K  R  G  R  E  D  Q  K  M  S  S  N  I  E  S  H  S  K  L  L  K  D  D  P  N  V  E  M  V  G  G  P  K  S  K  A  Q  P  V  M  H  L  S  D  :  E  M  D  Y  L  D  P  Y  E  A  A  V  I  A  L  P  V  L  V  K  E  R  L  V  R  I  L  R  L  G  I  A  T  R  Y  D  :  I  D  V  V  N  L  T  S  L  K  M  L  P  E  S  A  A  I  S  V  L  D  Q  :  L  M  W  S  E  A  D  M  Q  N  K  G  G  F  L  A  S  L  I  S  K  V  C  S  A  E  C  R  *  A  S  K  V  L  S  L  L  V  L  *  Y  F  A  R  F  I  *  Q  S  L  L  W  K  *  Q  Q  V  E  K  L  G  L  K  Q  F  D  S  K  S  R  V  E  D  V  A  L  R  V  P  E  P  D  S  F  S  T  R  V  R  L  P  H  L  D  S  Y  A  S  R  V  P  L  P  M  A  R :   A  D  V  Y  T  S  R  Y  S  A  Y  L  D  P  Y  Q  S  G  R  V  T  T  E  R  M  E  E  A  S  S  H  L  Q  G  T  S  L  T  Y  G  Q  V  T  T  R  M  E  E  A  G  S  I  H  K  K  R  M  E  E  A  N  P  T  L  Q  S  F  L  S  G  G  V  T  K  R  R  M  E  E  P  S  P  L  Q  A  T  S  L  P  S  G  R  V  S  R  M  D  E  A  G  P  T  F  Q  A  S  W  S  P  S  A  A  A  D  R  V  G  L  H  S  R  I  T  P  T  S  D  H  Q  Q  T  R  P  R  I  R  F  D  P  F  T  G  E  P  </second_frame>
            <third_frame>   Q  L  L  H  R  K  I  V  R  *  Y  A  G  K  T  E  L  R  N  D  N  *  F  E  G  L  G  F  R  P  N  H  S  R  I  E  N  S  L  E  T  S  F  F  Q  :  N  R  K  *  K  G  Q  R  F  L  L  V  V  W  P  V  L  L  L  K  A  K  F  T  R :   Y  F  L  H  A  V  R  L  W  K  *  G  *  *  K  T  R  *  A  M  P  R :   G  S  A  L  Y  D  L  Q  Q  N  M  L  L  T  K  L  *  R  K  N  L  D  M  C :   *  M  G  R  K  L  G  F  A  P  Q  L  S  R  T  H  Y  F  L  E  I  L  T  K  :  V  G  V  L  R  N  L  R  V  L  C  A  R :   F  F  Q  M  L  H  L  L  I  L  Q  F  L  E  M  S  N  L  V  R  S  N  G  I  G  D  L  P  L  *  N  F  H  L  M  L :   L  Q  L  V  L  Y  G  *  A  P  N  L  I  F  S  S  V  A  T  C  I  H  L  Y  S  G  L  R  R  N  L  K  L  I  L  M  N  L  L  R :   S  K  *  P  L  S  E  M  Y  L  L  V  L  M  K  I  T  *  R  S  S  F  S  P  L  A  M :   *  R  R  L  L  S  P  G  R  V  V  P  P  L  D  L  F  T  S  I  S  D  L :   I  L  T  M  L  L  K  D  *  M  R  K  L  Y  K  G  Q  G  E  V  P  Q  A  R  F  R :   S  K  L  R  G  Q  L  I  R  T  G  N  E  V  V  R  I  K  K  C  P  V  T  L  R  V  I  P  S  F  *  R  M  I  Q  M  L  R  W  L  G  V  L  N  Q  K  L  N  R  *  C  I  Y  Q  M :   K  W  I  I  W  I  L  M  K  L  L  *  L  H  Y  L  C  L  S  R  S  V  *  F  G  S  C  G  L  V  L  L  L  D  M  I :   *  M  L  S  T  *  P  V  L  R  C  C  P  S  Q  L  P  Y  L  F  L  T  S :   S  C  G  L  K  L  I  C  R  T  R  E  D  F  *  L  H  *  F  L  K  Y  V  L  Q  S  A  D  K  H  R  K  C  Y  L  C  *  Y  Y  N  I  L  R  A  L  F  N  K  V  F  S  G  N  S  S  R  L  K  S  W  D  *  N  S  L  I  A  S  Q  G  *  K  M  L  P  *  G  Y  Q  N  Q  T  A  S  L  Q  E  F  V  C  H  I  *  I  H  M  P  P  E  Y  P  C  P  W  L   : G  L  M  F  T  H  L  A  I  Q  R  I  *  I  P  I  N  L  V  G  *  Q  Q  R  G  W  R  K  Q  V  P  I  C  R  G  L  H  L  R  M  V  R  *  Q  R  G  W  R  K  Q  V  L  F  T  R  K  G  W  R  K  Q  I  P  L  C  S  R  S  S  L  A  G  *  L  K  G  G  W  R  N  Q  V  L  C  R  Q  H  P  F  H  L  V  E  Y  Q  G  W  M  K  Q  V  P  L  F  R  H  L  G  V  L  Q  L  L  L  T  E  L  D  F  I  H  A  L  P  Q  L  L  I  I  N  R  L  D  H  G  S  G  L  I  P  S  L  V  S  H </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0025E22.1" strand="-"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="67483" stop="67456"/>
                    <exon start="67089" stop="67016"/>
                    <exon start="65510" stop="65445"/>
                    <exon start="65303" stop="65232"/>
                    <exon start="63879" stop="63807"/>
                    <exon start="63377" stop="63340"/>
                    <exon start="63257" stop="63150"/>
                    <exon start="60506" stop="60387"/>
                    <exon start="60294" stop="60214"/>
                    <exon start="60097" stop="60029"/>
                    <exon start="57985" stop="57908"/>
                    <exon start="57804" stop="57640"/>
                    <exon start="56654" stop="56547"/>
                    <exon start="55370" stop="55302"/>
                    <exon start="55193" stop="55107"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1233</number_coding_nucleotides>
                  <number_encoded_amino_acids>411</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EFIGDFIFSEQEMKGTEIFVGGLARTTTESKIHEVFSSCGEIVEIRLIKDQIGNAKGFCFVRFATKYAADKALKEKSGYVLDGKKIGIRPSVEQDTLFLGNLNKGWGAEEFESIVRQVFPDVTSVDLAILGDVQLGQKQRNRGFAFVKFSSHAAAARALRVGSQSDFLIGGNLHPSVQWAEEESEVDPNELAQIKVAFVRNVPPGADEDYLKKLFQPFGNVEKVTLSRKGSSTIGFVYFDKRSDLDNAIKGLNEKTVQGPRGGPSSKIQVEVARPTDKNRKRGREDQKMSSNIESHSKLLKDDPNVEMVGGPKSKAQPVMHLSDEMDYLDPYEAAVIALPVLVKERLVRILRLGIATRYDIDVVNLTSLKMLPESAAISVLDQLMWSEADMQNKGGFLASLISKVCSAECR*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0025E22.1" strand="-"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="55031" stop="54877"/>
                    <exon start="54685" stop="54253"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>588</number_coding_nucleotides>
                  <number_encoded_amino_acids>196</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QQVEKLGLKQFDSKSRVEDVALRVPEPDSFSTRVRLPHLDSYASRVPLPMARADVYTSRYSAYLDPYQSGRVTTERMEEASSHLQGTSLTYGQVTTRMEEAGSIHKKRMEEANPTLQSFLSGGVTKRRMEEPSPLQATSLPSGRVSRMDEAGPTFQASWSPSAAADRVGLHSRITPTSDHQQTRPRIRFDPFTGEP</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="-" PGL_start="70907" PGL_stop="69376"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="70907" e_stop="70495"/>
            <exon e_start="70174" e_stop="69575"/>
            <exon e_start="69469" e_stop="69376"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.978" e_score="1.000"/>
          <exon-intron don_prob="0.775" acc_prob="0.896" e_score="0.997"/>
          <exon-only e_score="0.989"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="70907" e_stop="70495" e_length="413"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.978">
            <gDNA_intron_boundary i_start="70494" i_stop="70175" i_length="320"/>
          </intron>
          <exon e_serial="2" e_score="0.997">
            <gDNA_exon_boundary e_start="70174" e_stop="69575" e_length="600"/>
          </exon>
          <intron i_serial="2" don_prob="0.775" acc_prob="0.896">
            <gDNA_intron_boundary i_start="69574" i_stop="69470" i_length="105"/>
          </intron>
          <exon e_serial="3" e_score="0.989">
            <gDNA_exon_boundary e_start="69469" e_stop="69376" e_length="94"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70907" stop="70495"/>
              <exon start="70174" stop="69575"/>
              <exon start="69469" stop="69376"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U566651" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AATGCTCACAAAAGCAAGAGGAAGATGAACACATTTTCCGAAGTAGATATCCTCCAGTCCATGTACCAGACAATGTGACTCTCCCAGAATTTGTACTTCATAATGTAGAGTTATACGCTGACAGACTGGCTTTTGTGGATGCTACCACGGGCAAAGGCTACACATATGGCGAAGTTGAAAGAGACATAAGGAGGTTTGCCAAGGCCTTGAGGTCCCTTGGCTTAAGAAAAGGAAGGGTTGTGTTGGTAGTGCTTCCAAATGTACCGGAATATGCTATTGTTGCTCTTGGAATCATGGCTGCTGGTGGTGTCTTTTCAGGTGCAAATCCAGCAGCTCATTCATCCGAAATTATGAAACAAGTTGAATCTGCTGATGGCAAGCTTATTGTCTCTGATCTACCCACCTATCACAAG : GTGAAAGATTGTGGATTGCCAGTAATAATACTAGGCGAAGAACGTGCAGAAGGGACGATTCATTGGGATGAATTGCTCGAAGCTGCAGATCGTGCCAGTTCCAGAACTGATCACATAACAAACCAAGAAGATGAAATTGTGCAACAAAGTGATCTATGTGCACTGCCCTTTTCATCAGGCACGACAGGACTATCCAAGGGAGTGATGTTAACTCACAGAAACCTAGTAGCAAACCTCTGCTCTACACTCTTTAGTATTAGTCCAGAAATGATAGGTCAAGTTACAATACTAGGTCTGATACCATTCTTTCACATTTATGGTATAACTGGAATCTGTTGTGCAACCATTAGGAACAAAGGGAAAGTGGTTGTCATGCGTAGGTACGAACTGAGGGCATTTCTAAATGCACTCATCATACATGAAGTCTCATTTGCACCTATCGTGCCACCTATCATCTTAGCACTTGTTAAGAATCCGATCGTTGATGAATTTGATCTCAAAAAGCTTAAGCTTAGATCCATCATGACAGCAGCTGCTCCACTTGCCCCTGAGATTCTTAATGAATTTGAGAAGAAATTTCCGGATGTTCAGGTCCAAGAG : GCATATGGGATGACTGAGCACAGCTGCATTACTCTTTCCCACAGCAATCAGCACATCGCTAAAAGAAATTCCGTTGGTTTTATTCTGCCTAATT</gDNA_template>
            <first_frame> N  A  H  K  S  K  R  K  M  N  T  F  S  E  V  D  I  L  Q  S  M  Y  Q  T  M  *  L  S  Q  N  L  Y  F  I  M  *  S  Y  T  L  T  D  W  L  L  W  M  L  P  R  A  K  A  T  H  M  A  K  L  K  E  T  *  G  G  L  P  R  P  *  G  P  L  A  *  E  K  E  G  L  C  W  *  C  F  Q  M  Y  R  N  M  L  L  L  L  L  E  S  W  L  L  V  V  S  F  Q  V  Q  I  Q  Q  L  I  H  P  K  L  *  N  K  L  N  L  L  M  A  S  L  L  S  L  I  Y  P  P  I  T  R :   *  K  I  V  D  C  Q  *  *  Y  *  A  K  N  V  Q  K  G  R  F  I  G  M  N  C  S  K  L  Q  I  V  P  V  P  E  L  I  T  *  Q  T  K  K  M  K  L  C  N  K  V  I  Y  V  H  C  P  F  H  Q  A  R  Q  D  Y  P  R  E  *  C  *  L  T  E  T  *  *  Q  T  S  A  L  H  S  L  V  L  V  Q  K  *  *  V  K  L  Q  Y  *  V  *  Y  H  S  F  T  F  M  V  *  L  E  S  V  V  Q  P  L  G  T  K  G  K  W  L  S  C  V  G  T  N  *  G  H  F  *  M  H  S  S  Y  M  K  S  H  L  H  L  S  C  H  L  S  S  *  H  L  L  R  I  R  S  L  M  N  L  I  S  K  S  L  S  L  D  P  S  *  Q  Q  L  L  H  L  P  L  R  F  L  M  N  L  R  R  N  F  R  M  F  R  S  K  R :   H  M  G  *  L  S  T  A  A  L  L  F  P  T  A  I  S  T  S  L  K  E  I  P  L  V  L  F  C  L  I </first_frame>
            <second_frame>  M  L  T  K  A  R  G  R  *  T  H  F  P  K  *  I  S  S  S  P  C  T  R  Q  C  D  S  P  R  I  C  T  S  *  C  R  V  I  R  *  Q  T  G  F  C  G  C  Y  H  G  Q  R  L  H  I  W  R  S  *  K  R  H  K  E  V  C  Q  G  L  E  V  P  W  L  K  K  R  K  G  C  V  G  S  A  S  K  C  T  G  I  C  Y  C  C  S  W  N  H  G  C  W  W  C  L  F  R  C  K  S  S  S  S  F  I  R  N  Y  E  T  S  *  I  C  *  W  Q  A  Y  C  L  *  S  T  H  L  S  Q   : G  E  R  L  W  I  A  S  N  N  T  R  R  R  T  C  R  R  D  D  S  L  G  *  I  A  R  S  C  R  S  C  Q  F  Q  N  *  S  H  N  K  P  R  R  *  N  C  A  T  K  *  S  M  C  T  A  L  F  I  R  H  D  R  T  I  Q  G  S  D  V  N  S  Q  K  P  S  S  K  P  L  L  Y  T  L  *  Y  *  S  R  N  D  R  S  S  Y  N  T  R  S  D  T  I  L  S  H  L  W  Y  N  W  N  L  L  C  N  H  *  E  Q  R  E  S  G  C  H  A  *  V  R  T  E  G  I  S  K  C  T  H  H  T  *  S  L  I  C  T  Y  R  A  T  Y  H  L  S  T  C  *  E  S  D  R  *  *  I  *  S  Q  K  A  *  A  *  I  H  H  D  S  S  C  S  T  C  P  *  D  S  *  *  I  *  E  E  I  S  G  C  S  G  P  R   : G  I  W  D  D  *  A  Q  L  H  Y  S  F  P  Q  Q  S  A  H  R  *  K  K  F  R  W  F  Y  S  A  *   </second_frame>
            <third_frame>   C  S  Q  K  Q  E  E  D  E  H  I  F  R  S  R  Y  P  P  V  H  V  P  D  N  V  T  L  P  E  F  V  L  H  N  V  E  L  Y  A  D  R  L  A  F  V  D  A  T  T  G  K  G  Y  T  Y  G  E  V  E  R  D  I  R  R  F  A  K  A  L  R  S  L  G  L  R  K  G  R  V  V  L  V  V  L  P  N  V  P  E  Y  A  I  V  A  L  G  I  M  A  A  G  G  V  F  S  G  A  N  P  A  A  H  S  S  E  I  M  K  Q  V  E  S  A  D  G  K  L  I  V  S  D  L  P  T  Y  H  K  :  V  K  D  C  G  L  P  V  I  I  L  G  E  E  R  A  E  G  T  I  H  W  D  E  L  L  E  A  A  D  R  A  S  S  R  T  D  H  I  T  N  Q  E  D  E  I  V  Q  Q  S  D  L  C  A  L  P  F  S  S  G  T  T  G  L  S  K  G  V  M  L  T  H  R  N  L  V  A  N  L  C  S  T  L  F  S  I  S  P  E  M  I  G  Q  V  T  I  L  G  L  I  P  F  F  H  I  Y  G  I  T  G  I  C  C  A  T  I  R  N  K  G  K  V  V  V  M  R  R  Y  E  L  R  A  F  L  N  A  L  I  I  H  E  V  S  F  A  P  I  V  P  P  I  I  L  A  L  V  K  N  P  I  V  D  E  F  D  L  K  K  L  K  L  R  S  I  M  T  A  A  A  P  L  A  P  E  I  L  N  E  F  E  K  K  F  P  D  V  Q  V  Q  E  :  A  Y  G  M  T  E  H  S  C  I  T  L  S  H  S  N  Q  H  I  A  K  R  N  S  V  G  F  I  L  P  N  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0025E22.1" strand="-"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="70905" stop="70495"/>
                    <exon start="70174" stop="69575"/>
                    <exon start="69469" stop="69377"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1104</number_coding_nucleotides>
                  <number_encoded_amino_acids>368</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CSQKQEEDEHIFRSRYPPVHVPDNVTLPEFVLHNVELYADRLAFVDATTGKGYTYGEVERDIRRFAKALRSLGLRKGRVVLVVLPNVPEYAIVALGIMAAGGVFSGANPAAHSSEIMKQVESADGKLIVSDLPTYHKVKDCGLPVIILGEERAEGTIHWDELLEAADRASSRTDHITNQEDEIVQQSDLCALPFSSGTTGLSKGVMLTHRNLVANLCSTLFSISPEMIGQVTILGLIPFFHIYGITGICCATIRNKGKVVVMRRYELRAFLNALIIHEVSFAPIVPPIILALVKNPIVDEFDLKKLKLRSIMTAAAPLAPEILNEFEKKFPDVQVQEAYGMTEHSCITLSHSNQHIAKRNSVGFILPN</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="-" PGL_start="76708" PGL_stop="71475"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="76708" e_stop="75927"/>
            <exon e_start="75102" e_stop="74938"/>
            <exon e_start="74812" e_stop="74675"/>
            <exon e_start="74585" e_stop="74434"/>
            <exon e_start="74338" e_stop="74225"/>
            <exon e_start="73338" e_stop="73240"/>
            <exon e_start="73148" e_stop="73083"/>
            <exon e_start="72026" e_stop="71919"/>
            <exon e_start="71801" e_stop="71475"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.989" acc_prob="0.981" e_score="1.000"/>
          <exon-intron don_prob="0.923" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.992" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.984" acc_prob="0.973" e_score="0.956"/>
          <exon-intron don_prob="0.991" acc_prob="0.969" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.933" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.998" e_score="1.000"/>
          <exon-only e_score="0.972"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="76708" e_stop="75927" e_length="782"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.998">
            <gDNA_intron_boundary i_start="75926" i_stop="75103" i_length="824"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="75102" e_stop="74938" e_length="165"/>
          </exon>
          <intron i_serial="2" don_prob="0.989" acc_prob="0.981">
            <gDNA_intron_boundary i_start="74937" i_stop="74813" i_length="125"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="74812" e_stop="74675" e_length="138"/>
          </exon>
          <intron i_serial="3" don_prob="0.923" acc_prob="0.997">
            <gDNA_intron_boundary i_start="74674" i_stop="74586" i_length="89"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="74585" e_stop="74434" e_length="152"/>
          </exon>
          <intron i_serial="4" don_prob="0.992" acc_prob="0.998">
            <gDNA_intron_boundary i_start="74433" i_stop="74339" i_length="95"/>
          </intron>
          <exon e_serial="5" e_score="0.956">
            <gDNA_exon_boundary e_start="74338" e_stop="74225" e_length="114"/>
          </exon>
          <intron i_serial="5" don_prob="0.984" acc_prob="0.973">
            <gDNA_intron_boundary i_start="74224" i_stop="73339" i_length="886"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="73338" e_stop="73240" e_length="99"/>
          </exon>
          <intron i_serial="6" don_prob="0.991" acc_prob="0.969">
            <gDNA_intron_boundary i_start="73239" i_stop="73149" i_length="91"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="73148" e_stop="73083" e_length="66"/>
          </exon>
          <intron i_serial="7" don_prob="1.000" acc_prob="0.933">
            <gDNA_intron_boundary i_start="73082" i_stop="72027" i_length="1056"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="72026" e_stop="71919" e_length="108"/>
          </exon>
          <intron i_serial="8" don_prob="0.995" acc_prob="0.998">
            <gDNA_intron_boundary i_start="71918" i_stop="71802" i_length="117"/>
          </intron>
          <exon e_serial="9" e_score="0.972">
            <gDNA_exon_boundary e_start="71801" e_stop="71475" e_length="327"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76708" stop="75927"/>
              <exon start="75102" stop="74938"/>
              <exon start="74812" stop="74675"/>
              <exon start="74585" stop="74434"/>
              <exon start="74338" stop="74225"/>
              <exon start="73338" stop="73240"/>
              <exon start="73148" stop="73083"/>
              <exon start="72026" stop="71919"/>
              <exon start="71801" stop="71475"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U580309" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAGCTTTCTTAGTCGACCAGAGCGTGCTTCTTGATTTTCTTGAGCTTCGTTCCCATTTCCCTCTTTCTCTGTATAGGAACCACAACAAACCCTAGCCTAATTTACAAGCCATAGCCATGACGATCCGGCAGCTCTTAACCCTAGCCCGCCGGTCCCGAAACCTATCCTCATCCCATTCACTGCGGCGTCTTTCTTCGGCGTCTGCCGCCGTCGCCGCCACATCCTCCTCCGCCCCGGCCATCGGTCCGCCACCCCCAGATGCAATGATCTACGATCGATTGGCTGAAGACGTTAAACGAAAGATCAAGAGACTCGAGAATCCTGATTCCCGATTCCTTCAGTACAACTCGCCACACCCAACTTTAGCCGACCACACATCAATCCTCAGCTTCCCCTCTACGCGCGTGACTACACTACCATCGGGCCTGCGTGTGGCCACGGAGACTAATCTCGCTGTCAAGACTGCCACCGTTGGGGTATTCATTGATGCAGGGTCAAGGTTTGAGACCGATGAGACTAATGGAACAGCTCATTTTCTTGAGCATATGATCTTTAAGGGTACTGAAAAGAGGACTTCTTGGGAAATGGAGGAGGAGATTGAGAATATGGGTGGACATTTGAATGCATATACTTCCAGGGAGCAAACAGCATACTATGCTAAAGTGTTGGATAATGACGTCCCTGTAGCTTTGGATATTTTGGCTGATATACTTCAGAATTCTAAGTTCGAAGAGAAAAAGATTGAACGTGAACGTGATGTCATCCTCAGGGAGATGGAGGAG : GTCGAAGGTCAAACAGAGGAAGTCATCTTTGACCACTTGCATTCAACTGCATTCCAGTACTCACCTTTGGGTAGGACTATTCTTGGACCTGCCCAGAATATAAAGACAATCACCAGAAGTCATCTGAAGGACTACATATCAACACATTATACCGCTCCCAGAATG : GTAATTGTTGCTTCTGGGCCTGTTAAACATGAAGAATTTGTTGAGCAAGTTAAGAAACAGTTTACTAAACTTTCAACCAATCCGAGTACGGCCTCAGAATTGGTTGCCAGAGAACCAGCAATTTTTACAGGTTCAGAG : GTTAGGGTAATTGATGATGACATTCCATTGGCACAATTTGCTGTTGCTTTTCAAGGGGCACCGTGGACTGATCCAGATGCCATTCCACTGATGGTAATGCAATCCATGCTGGGCACTTGGAATAAAAATGCCGGAGGAGGGAAACACATGGG : CTCCGATCTGGCACAAAGTGTTGGCATTAATGAACTTGCTGAGAGCCATGATGTCTTTTTAACACCAACTATAAGGATACTGGTTTGTTCCGGCGTGGTATGCTGTTGCAAAAG : CCTGATTGTTTGAGTGATTTGTCCTACTGCATTATGCGCGAGATAAGCAAATTGTGCTACCGGGTTTCGGATGCTGATGTGACTCGTGCTTGCAACCAG : TTGAAGTCTTCTCTCATGCTACACATTGATGGAACTAGTCCTGTTGCTGAAGACATTGGGCGTCAG : CTACTCACATATGGCAGAAGGATTCCAGCTACAGAGCTGTTTGCAAGGGTTGATGCTGTGGATGCTAGCACCATCAAACGAGTTGCAAACAGATTTATCTTTGACCAG : GATGTTGCTATATCCGCGCTGGGGCCTATCCAGACACTACCTGATTATAACTGGTTCAGACGCAGAACCTACATGCTCCGTTATTAGACGATTCTTTTTTTTCTTTTTTTGGAGTTGTAATGCATCACAATTACACACCTCGCTCGACCATTCCAAACTTGGACATATAGGTCTTACTTTTCCAATTCTTCCTCTTGCCTACTTTCTGGTTTTGTAACGGTTTTGTAGCTTTTCCCTATAAAATAAGCGGCCTATATTTAATAATTTGGTTGTTGACGTTTGTTTTCATATTCTTTGAAAAAAATTGTACTCGTACATGCAAATTAA</gDNA_template>
            <first_frame> K  L  S  *  S  T  R  A  C  F  L  I  F  L  S  F  V  P  I  S  L  F  L  C  I  G  T  T  T  N  P  S  L  I  Y  K  P  *  P  *  R  S  G  S  S  *  P  *  P  A  G  P  E  T  Y  P  H  P  I  H  C  G  V  F  L  R  R  L  P  P  S  P  P  H  P  P  P  P  R  P  S  V  R  H  P  Q  M  Q  *  S  T  I  D  W  L  K  T  L  N  E  R  S  R  D  S  R  I  L  I  P  D  S  F  S  T  T  R  H  T  Q  L  *  P  T  T  H  Q  S  S  A  S  P  L  R  A  *  L  H  Y  H  R  A  C  V  W  P  R  R  L  I  S  L  S  R  L  P  P  L  G  Y  S  L  M  Q  G  Q  G  L  R  P  M  R  L  M  E  Q  L  I  F  L  S  I  *  S  L  R  V  L  K  R  G  L  L  G  K  W  R  R  R  L  R  I  W  V  D  I  *  M  H  I  L  P  G  S  K  Q  H  T  M  L  K  C  W  I  M  T  S  L  *  L  W  I  F  W  L  I  Y  F  R  I  L  S  S  K  R  K  R  L  N  V  N  V  M  S  S  S  G  R  W  R  R :   S  K  V  K  Q  R  K  S  S  L  T  T  C  I  Q  L  H  S  S  T  H  L  W  V  G  L  F  L  D  L  P  R  I  *  R  Q  S  P  E  V  I  *  R  T  T  Y  Q  H  I  I  P  L  P  E  W :   *  L  L  L  L  G  L  L  N  M  K  N  L  L  S  K  L  R  N  S  L  L  N  F  Q  P  I  R  V  R  P  Q  N  W  L  P  E  N  Q  Q  F  L  Q  V  Q  R :   L  G  *  L  M  M  T  F  H  W  H  N  L  L  L  L  F  K  G  H  R  G  L  I  Q  M  P  F  H  *  W  *  C  N  P  C  W  A  L  G  I  K  M  P  E  E  G  N  T  W   : A  P  I  W  H  K  V  L  A  L  M  N  L  L  R  A  M  M  S  F  *  H  Q  L  *  G  Y  W  F  V  P  A  W  Y  A  V  A  K   : A  *  L  F  E  *  F  V  L  L  H  Y  A  R  D  K  Q  I  V  L  P  G  F  G  C  *  C  D  S  C  L  Q  P   : V  E  V  F  S  H  A  T  H  *  W  N  *  S  C  C  *  R  H  W  A  S   : A  T  H  I  W  Q  K  D  S  S  Y  R  A  V  C  K  G  *  C  C  G  C  *  H  H  Q  T  S  C  K  Q  I  Y  L  *  P   : G  C  C  Y  I  R  A  G  A  Y  P  D  T  T  *  L  *  L  V  Q  T  Q  N  L  H  A  P  L  L  D  D  S  F  F  S  F  F  G  V  V  M  H  H  N  Y  T  P  R  S  T  I  P  N  L  D  I  *  V  L  L  F  Q  F  F  L  L  P  T  F  W  F  C  N  G  F  V  A  F  P  Y  K  I  S  G  L  Y  L  I  I  W  L  L  T  F  V  F  I  F  F  E  K  N  C  T  R  T  C  K  L  </first_frame>
            <second_frame>  S  F  L  S  R  P  E  R  A  S  *  F  S  *  A  S  F  P  F  P  S  F  S  V  *  E  P  Q  Q  T  L  A  *  F  T  S  H  S  H  D  D  P  A  A  L  N  P  S  P  P  V  P  K  P  I  L  I  P  F  T  A  A  S  F  F  G  V  C  R  R  R  R  H  I  L  L  R  P  G  H  R  S  A  T  P  R  C  N  D  L  R  S  I  G  *  R  R  *  T  K  D  Q  E  T  R  E  S  *  F  P  I  P  S  V  Q  L  A  T  P  N  F  S  R  P  H  I  N  P  Q  L  P  L  Y  A  R  D  Y  T  T  I  G  P  A  C  G  H  G  D  *  S  R  C  Q  D  C  H  R  W  G  I  H  *  C  R  V  K  V  *  D  R  *  D  *  W  N  S  S  F  S  *  A  Y  D  L  *  G  Y  *  K  E  D  F  L  G  N  G  G  G  D  *  E  Y  G  W  T  F  E  C  I  Y  F  Q  G  A  N  S  I  L  C  *  S  V  G  *  *  R  P  C  S  F  G  Y  F  G  *  Y  T  S  E  F  *  V  R  R  E  K  D  *  T  *  T  *  C  H  P  Q  G  D  G  G   : G  R  R  S  N  R  G  S  H  L  *  P  L  A  F  N  C  I  P  V  L  T  F  G  *  D  Y  S  W  T  C  P  E  Y  K  D  N  H  Q  K  S  S  E  G  L  H  I  N  T  L  Y  R  S  Q  N   : G  N  C  C  F  W  A  C  *  T  *  R  I  C  *  A  S  *  E  T  V  Y  *  T  F  N  Q  S  E  Y  G  L  R  I  G  C  Q  R  T  S  N  F  Y  R  F  R   : G  *  G  N  *  *  *  H  S  I  G  T  I  C  C  C  F  S  R  G  T  V  D  *  S  R  C  H  S  T  D  G  N  A  I  H  A  G  H  L  E  *  K  C  R  R  R  E  T  H  G  :  L  R  S  G  T  K  C  W  H  *  *  T  C  *  E  P  *  C  L  F  N  T  N  Y  K  D  T  G  L  F  R  R  G  M  L  L  Q  K  :  P  D  C  L  S  D  L  S  Y  C  I  M  R  E  I  S  K  L  C  Y  R  V  S  D  A  D  V  T  R  A  C  N  Q  :  L  K  S  S  L  M  L  H  I  D  G  T  S  P  V  A  E  D  I  G  R  Q  :  L  L  T  Y  G  R  R  I  P  A  T  E  L  F  A  R  V  D  A  V  D  A  S  T  I  K  R  V  A  N  R  F  I  F  D  Q  :  D  V  A  I  S  A  L  G  P  I  Q  T  L  P  D  Y  N  W  F  R  R  R  T  Y  M  L  R  Y  *  T  I  L  F  F  L  F  L  E  L  *  C  I  T  I  T  H  L  A  R  P  F  Q  T  W  T  Y  R  S  Y  F  S  N  S  S  S  C  L  L  S  G  F  V  T  V  L  *  L  F  P  I  K  *  A  A  Y  I  *  *  F  G  C  *  R  L  F  S  Y  S  L  K  K  I  V  L  V  H  A  N  * </second_frame>
            <third_frame>   A  F  L  V  D  Q  S  V  L  L  D  F  L  E  L  R  S  H  F  P  L  S  L  Y  R  N  H  N  K  P  *  P  N  L  Q  A  I  A  M  T  I  R  Q  L  L  T  L  A  R  R  S  R  N  L  S  S  S  H  S  L  R  R  L  S  S  A  S  A  A  V  A  A  T  S  S  S  A  P  A  I  G  P  P  P  P  D  A  M  I  Y  D  R  L  A  E  D  V  K  R  K  I  K  R  L  E  N  P  D  S  R  F  L  Q  Y  N  S  P  H  P  T  L  A  D  H  T  S  I  L  S  F  P  S  T  R  V  T  T  L  P  S  G  L  R  V  A  T  E  T  N  L  A  V  K  T  A  T  V  G  V  F  I  D  A  G  S  R  F  E  T  D  E  T  N  G  T  A  H  F  L  E  H  M  I  F  K  G  T  E  K  R  T  S  W  E  M  E  E  E  I  E  N  M  G  G  H  L  N  A  Y  T  S  R  E  Q  T  A  Y  Y  A  K  V  L  D  N  D  V  P  V  A  L  D  I  L  A  D  I  L  Q  N  S  K  F  E  E  K  K  I  E  R  E  R  D  V  I  L  R  E  M  E  E  :  V  E  G  Q  T  E  E  V  I  F  D  H  L  H  S  T  A  F  Q  Y  S  P  L  G  R  T  I  L  G  P  A  Q  N  I  K  T  I  T  R  S  H  L  K  D  Y  I  S  T  H  Y  T  A  P  R  M  :  V  I  V  A  S  G  P  V  K  H  E  E  F  V  E  Q  V  K  K  Q  F  T  K  L  S  T  N  P  S  T  A  S  E  L  V  A  R  E  P  A  I  F  T  G  S  E  :  V  R  V  I  D  D  D  I  P  L  A  Q  F  A  V  A  F  Q  G  A  P  W  T  D  P  D  A  I  P  L  M  V  M  Q  S  M  L  G  T  W  N  K  N  A  G  G  G  K  H  M  G :   S  D  L  A  Q  S  V  G  I  N  E  L  A  E  S  H  D  V  F  L  T  P  T  I  R  I  L  V  C  S  G  V  V  C  C  C  K  S :   L  I  V  *  V  I  C  P  T  A  L  C  A  R  *  A  N  C  A  T  G  F  R  M  L  M  *  L  V  L  A  T  S :   *  S  L  L  S  C  Y  T  L  M  E  L  V  L  L  L  K  T  L  G  V  S :   Y  S  H  M  A  E  G  F  Q  L  Q  S  C  L  Q  G  L  M  L  W  M  L  A  P  S  N  E  L  Q  T  D  L  S  L  T  R :   M  L  L  Y  P  R  W  G  L  S  R  H  Y  L  I  I  T  G  S  D  A  E  P  T  C  S  V  I  R  R  F  F  F  F  F  F  W  S  C  N  A  S  Q  L  H  T  S  L  D  H  S  K  L  G  H  I  G  L  T  F  P  I  L  P  L  A  Y  F  L  V  L  *  R  F  C  S  F  S  L  *  N  K  R  P  I  F  N  N  L  V  V  D  V  C  F  H  I  L  *  K  K  L  Y  S  Y  M  Q  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0025E22.1" strand="-"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="76613" stop="75927"/>
                    <exon start="75102" stop="74938"/>
                    <exon start="74812" stop="74675"/>
                    <exon start="74585" stop="74434"/>
                    <exon start="74338" stop="74225"/>
                    <exon start="73338" stop="73326"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1266</number_coding_nucleotides>
                  <number_encoded_amino_acids>422</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PNLQAIAMTIRQLLTLARRSRNLSSSHSLRRLSSASAAVAATSSSAPAIGPPPPDAMIYDRLAEDVKRKIKRLENPDSRFLQYNSPHPTLADHTSILSFPSTRVTTLPSGLRVATETNLAVKTATVGVFIDAGSRFETDETNGTAHFLEHMIFKGTEKRTSWEMEEEIENMGGHLNAYTSREQTAYYAKVLDNDVPVALDILADILQNSKFEEKKIERERDVILREMEEVEGQTEEVIFDHLHSTAFQYSPLGRTILGPAQNIKTITRSHLKDYISTHYTAPRMVIVASGPVKHEEFVEQVKKQFTKLSTNPSTASELVAREPAIFTGSEVRVIDDDIPLAQFAVAFQGAPWTDPDAIPLMVMQSMLGTWNKNAGGGKHMGSDLAQSVGINELAESHDVFLTPTIRILVCSGVVCCCKSLIV*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0025E22.1" strand="-"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="73144" stop="73083"/>
                    <exon start="72026" stop="71919"/>
                    <exon start="71801" stop="71585"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>384</number_coding_nucleotides>
                  <number_encoded_amino_acids>128</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SLLSCYTLMELVLLLKTLGVSYSHMAEGFQLQSCLQGLMLWMLAPSNELQTDLSLTRMLLYPRWGLSRHYLIITGSDAEPTCSVIRRFFFFFFWSCNASQLHTSLDHSKLGHIGLTFPILPLAYFLVL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="+" PGL_start="87004" PGL_stop="87452"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="87004" e_stop="87452"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.991"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.991">
            <gDNA_exon_boundary e_start="87004" e_stop="87452" e_length="449"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="87004" stop="87452"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U594760" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CCTTGATTTCCAGAAGATATATGATAACATGCAAAAACCCGCTTTTGTTTTTGATGGCAGGAATGTTGTGAATGCTGAAAAGCTAAGAGAGATTGGGTTTATCGTCTACTCAATTGGTAAGCCTCTCGATGCCTGGCTTAAGGACATGCCTGCTGTCGCTTAAGAGCCTTACATTGCTCGAGTGACTTGTTTTGGTCTTAAAGATATTAGTTATCAGACAATCATCAGCTGGGATTCTTTACTATTTTTTTTACCACTTCAATTTCTGTTTCCATTTTATCCATTGTAGTCATAAGACCACCATCGTCACTATCTTGAGTCACATGTAAGATGTTTTCTGTTTCTTTTGTATTGATGATACTTGTTTTTATCATTTACTTGTCATGTCGGAGGATTTATTTGTTCGATTATGAAGGGTATTTAAGTTTTGAACTAGTTTTTTTCTTCCT</gDNA_template>
            <first_frame> P  *  F  P  E  D  I  *  *  H  A  K  T  R  F  C  F  *  W  Q  E  C  C  E  C  *  K  A  K  R  D  W  V  Y  R  L  L  N  W  *  A  S  R  C  L  A  *  G  H  A  C  C  R  L  R  A  L  H  C  S  S  D  L  F  W  S  *  R  Y  *  L  S  D  N  H  Q  L  G  F  F  T  I  F  F  T  T  S  I  S  V  S  I  L  S  I  V  V  I  R  P  P  S  S  L  S  *  V  T  C  K  M  F  S  V  S  F  V  L  M  I  L  V  F  I  I  Y  L  S  C  R  R  I  Y  L  F  D  Y  E  G  Y  L  S  F  E  L  V  F  F  F   </first_frame>
            <second_frame>  L  D  F  Q  K  I  Y  D  N  M  Q  K  P  A  F  V  F  D  G  R  N  V  V  N  A  E  K  L  R  E  I  G  F  I  V  Y  S  I  G  K  P  L  D  A  W  L  K  D  M  P  A  V  A  *  E  P  Y  I  A  R  V  T  C  F  G  L  K  D  I  S  Y  Q  T  I  I  S  W  D  S  L  L  F  F  L  P  L  Q  F  L  F  P  F  Y  P  L  *  S  *  D  H  H  R  H  Y  L  E  S  H  V  R  C  F  L  F  L  L  Y  *  *  Y  L  F  L  S  F  T  C  H  V  G  G  F  I  C  S  I  M  K  G  I  *  V  L  N  *  F  F  S  S  </second_frame>
            <third_frame>   L  I  S  R  R  Y  M  I  T  C  K  N  P  L  L  F  L  M  A  G  M  L  *  M  L  K  S  *  E  R  L  G  L  S  S  T  Q  L  V  S  L  S  M  P  G  L  R  T  C  L  L  S  L  K  S  L  T  L  L  E  *  L  V  L  V  L  K  I  L  V  I  R  Q  S  S  A  G  I  L  Y  Y  F  F  Y  H  F  N  F  C  F  H  F  I  H  C  S  H  K  T  T  I  V  T  I  L  S  H  M  *  D  V  F  C  F  F  C  I  D  D  T  C  F  Y  H  L  L  V  M  S  E  D  L  F  V  R  L  *  R  V  F  K  F  *  T  S  F  F  L  P </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02SLm0025E22.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="+" PGL_start="91252" PGL_stop="92061"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="91252" e_stop="91815"/>
            <exon e_start="91907" e_stop="92061"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.988" acc_prob="0.998" e_score="0.998"/>
          <exon-only e_score="0.994"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="91252" e_stop="91815" e_length="564"/>
          </exon>
          <intron i_serial="1" don_prob="0.988" acc_prob="0.998">
            <gDNA_intron_boundary i_start="91816" i_stop="91906" i_length="91"/>
          </intron>
          <exon e_serial="2" e_score="0.994">
            <gDNA_exon_boundary e_start="91907" e_stop="92061" e_length="155"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91252" stop="91815"/>
              <exon start="91907" stop="92061"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U573942" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ACCACCATCTGTTACTGCTACTCTTGTCACCCCACCCCCTCATCATACCCTCCACCCCTAAATCCACACTCTACTCCCCCTTATACCCACTACCCCTCTCCACAGCCTCATTTCTGTACTTCCCATCTGGTCCCACCACCACCATCGCCGCCGCCTTCTCATATCCAATGCCAATGTGAAACCGTTCACCAAAATCATCATCATTTTCAAGAATTGAATCATCAAGCCAACAAAGTAACAGACCAACAAACCCAACGAATTGTTACATCTCTTCTCCGTCGGATCGCTGCCTTAGAATCTTCTCTCAGCCGGAGCTCCTCTACTTCTTCTGTTTCTTCTCGTTCTCGTCAAACGTTACGCGATGCTGCAGCGCGTACTATTCAGACCCATTTCAGAGCCTTCCTTGCTCGTAGATCGAGAACACTTCGACAGCTGAAGCAGTTGGCTTCCATCAAAACAACTCTCTATGTTCTCAAATCGTCAGTTTCTGGTAAAATACACATTGATATTCGAGCTGTTACTCGCAGAGCGACGGATTTACTCGTTAGACTTGATTGTATTGAG : GGCGATGATCCGTTAATCAGAGATGGTAGAAGGTCAATAAGCAACGAACTGACTCGATTTATGAAGGTGATTAATGGGGTTTCCATATTCTCAAGTAGAGTAGTTAAGAATGTGAGAGGTGGAAACAAAGCTAGGGTCTTTTCCGGTGACCGTAA</gDNA_template>
            <first_frame> T  T  I  C  Y  C  Y  S  C  H  P  T  P  S  S  Y  P  P  P  L  N  P  H  S  T  P  P  Y  T  H  Y  P  S  P  Q  P  H  F  C  T  S  H  L  V  P  P  P  P  S  P  P  P  S  H  I  Q  C  Q  C  E  T  V  H  Q  N  H  H  H  F  Q  E  L  N  H  Q  A  N  K  V  T  D  Q  Q  T  Q  R  I  V  T  S  L  L  R  R  I  A  A  L  E  S  S  L  S  R  S  S  S  T  S  S  V  S  S  R  S  R  Q  T  L  R  D  A  A  A  R  T  I  Q  T  H  F  R  A  F  L  A  R  R  S  R  T  L  R  Q  L  K  Q  L  A  S  I  K  T  T  L  Y  V  L  K  S  S  V  S  G  K  I  H  I  D  I  R  A  V  T  R  R  A  T  D  L  L  V  R  L  D  C  I  E  :  G  D  D  P  L  I  R  D  G  R  R  S  I  S  N  E  L  T  R  F  M  K  V  I  N  G  V  S  I  F  S  S  R  V  V  K  N  V  R  G  G  N  K  A  R  V  F  S  G  D  R   </first_frame>
            <second_frame>  P  P  S  V  T  A  T  L  V  T  P  P  P  H  H  T  L  H  P  *  I  H  T  L  L  P  L  I  P  T  T  P  L  H  S  L  I  S  V  L  P  I  W  S  H  H  H  H  R  R  R  L  L  I  S  N  A  N  V  K  P  F  T  K  I  I  I  I  F  K  N  *  I  I  K  P  T  K  *  Q  T  N  K  P  N  E  L  L  H  L  F  S  V  G  S  L  P  *  N  L  L  S  A  G  A  P  L  L  L  L  F  L  L  V  L  V  K  R  Y  A  M  L  Q  R  V  L  F  R  P  I  S  E  P  S  L  L  V  D  R  E  H  F  D  S  *  S  S  W  L  P  S  K  Q  L  S  M  F  S  N  R  Q  F  L  V  K  Y  T  L  I  F  E  L  L  L  A  E  R  R  I  Y  S  L  D  L  I  V  L  R :   A  M  I  R  *  S  E  M  V  E  G  Q  *  A  T  N  *  L  D  L  *  R  *  L  M  G  F  P  Y  S  Q  V  E  *  L  R  M  *  E  V  E  T  K  L  G  S  F  P  V  T  V  </second_frame>
            <third_frame>   H  H  L  L  L  L  L  L  S  P  H  P  L  I  I  P  S  T  P  K  S  T  L  Y  S  P  L  Y  P  L  P  L  S  T  A  S  F  L  Y  F  P  S  G  P  T  T  T  I  A  A  A  F  S  Y  P  M  P  M  *  N  R  S  P  K  S  S  S  F  S  R  I  E  S  S  S  Q  Q  S  N  R  P  T  N  P  T  N  C  Y  I  S  S  P  S  D  R  C  L  R  I  F  S  Q  P  E  L  L  Y  F  F  C  F  F  S  F  S  S  N  V  T  R  C  C  S  A  Y  Y  S  D  P  F  Q  S  L  P  C  S  *  I  E  N  T  S  T  A  E  A  V  G  F  H  Q  N  N  S  L  C  S  Q  I  V  S  F  W  *  N  T  H  *  Y  S  S  C  Y  S  Q  S  D  G  F  T  R  *  T  *  L  Y  *   : G  R  *  S  V  N  Q  R  W  *  K  V  N  K  Q  R  T  D  S  I  Y  E  G  D  *  W  G  F  H  I  L  K  *  S  S  *  E  C  E  R  W  K  Q  S  *  G  L  F  R  *  P  * </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0025E22.1" strand="+"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="91252" stop="91815"/>
                    <exon start="91907" stop="92059"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>717</number_coding_nucleotides>
                  <number_encoded_amino_acids>239</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TTICYCYSCHPTPSSYPPPLNPHSTPPYTHYPSPQPHFCTSHLVPPPPSPPPSHIQCQCETVHQNHHHFQELNHQANKVTDQQTQRIVTSLLRRIAALESSLSRSSSTSSVSSRSRQTLRDAAARTIQTHFRAFLARRSRTLRQLKQLASIKTTLYVLKSSVSGKIHIDIRAVTRRATDLLVRLDCIEGDDPLIRDGRRSISNELTRFMKVINGVSIFSSRVVKNVRGGNKARVFSGDR</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="-" PGL_start="93041" PGL_stop="92322"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="93041" e_stop="92322"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.994"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.994">
            <gDNA_exon_boundary e_start="93041" e_stop="92322" e_length="720"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="93041" stop="92322"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U584521" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GCTGAGAAGTATGATTTATTCCACAAGTTCAAATGACACTACACTCTCCAAGAAATAGCCACCTGTTAATTTATGTTGAATAAAATGTGACAGACATCTTTCAACTCTTCAACAATCATTCATTTAAGACCACTGAATAAGGGTCCATTACACCCAAAAGATCTCCCATCCATAACCACAATGACAGAAGAAAACATCTAAATTTAGTACTTCAAAACAGGTGAACTCTCCCTATCAAACTTAACAATACTCATCTAGACAATCATTACTAACAATTACAAACAATTCGAAATAACGGCAGAAGCCTAACTTCCACCTAATTGTTAATGCTCAACAGGACCTGTAGGAGAGCAAAGTTCAAATCTTGATCTTGTTGGGAACCTATTCAATTGTCCACTATTTTGACACCCTTTTTCCTGTTGATATAATCAGCAGCTCTAGCTTCCATCTTCACAGGCATTGGTGCTGAGAACACGGAACTCTCATTTTCGTGCTCATTATCATTCTCATCTCTCACATTCCTTTCATAATACCCATCCTTTCTTGAAATGTAATTTGGATCCATTTCATTATCACTACTTCCACTATACCCTCCATCTTCTTCCCCATCACCTTCACACCCCTTGGATGCCATGCCAAGCTTTTCAACTCTTTTGCTAAGGTTTTTTATCAGCTCTTTCTCAGTATCAAAAGTTTCTTGCTCATTAACATTCCCCATTG</gDNA_template>
            <first_frame> A  E  K  Y  D  L  F  H  K  F  K  *  H  Y  T  L  Q  E  I  A  T  C  *  F  M  L  N  K  M  *  Q  T  S  F  N  S  S  T  I  I  H  L  R  P  L  N  K  G  P  L  H  P  K  D  L  P  S  I  T  T  M  T  E  E  N  I  *  I  *  Y  F  K  T  G  E  L  S  L  S  N  L  T  I  L  I  *  T  I  I  T  N  N  Y  K  Q  F  E  I  T  A  E  A  *  L  P  P  N  C  *  C  S  T  G  P  V  G  E  Q  S  S  N  L  D  L  V  G  N  L  F  N  C  P  L  F  *  H  P  F  S  C  *  Y  N  Q  Q  L  *  L  P  S  S  Q  A  L  V  L  R  T  R  N  S  H  F  R  A  H  Y  H  S  H  L  S  H  S  F  H  N  T  H  P  F  L  K  C  N  L  D  P  F  H  Y  H  Y  F  H  Y  T  L  H  L  L  P  H  H  L  H  T  P  W  M  P  C  Q  A  F  Q  L  F  C  *  G  F  L  S  A  L  S  Q  Y  Q  K  F  L  A  H  *  H  S  P  L </first_frame>
            <second_frame>  L  R  S  M  I  Y  S  T  S  S  N  D  T  T  L  S  K  K  *  P  P  V  N  L  C  *  I  K  C  D  R  H  L  S  T  L  Q  Q  S  F  I  *  D  H  *  I  R  V  H  Y  T  Q  K  I  S  H  P  *  P  Q  *  Q  K  K  T  S  K  F  S  T  S  K  Q  V  N  S  P  Y  Q  T  *  Q  Y  S  S  R  Q  S  L  L  T  I  T  N  N  S  K  *  R  Q  K  P  N  F  H  L  I  V  N  A  Q  Q  D  L  *  E  S  K  V  Q  I  L  I  L  L  G  T  Y  S  I  V  H  Y  F  D  T  L  F  P  V  D  I  I  S  S  S  S  F  H  L  H  R  H  W  C  *  E  H  G  T  L  I  F  V  L  I  I  I  L  I  S  H  I  P  F  I  I  P  I  L  S  *  N  V  I  W  I  H  F  I  I  T  T  S  T  I  P  S  I  F  F  P  I  T  F  T  P  L  G  C  H  A  K  L  F  N  S  F  A  K  V  F  Y  Q  L  F  L  S  I  K  S  F  L  L  I  N  I  P  H   </second_frame>
            <third_frame>   *  E  V  *  F  I  P  Q  V  Q  M  T  L  H  S  P  R  N  S  H  L  L  I  Y  V  E  *  N  V  T  D  I  F  Q  L  F  N  N  H  S  F  K  T  T  E  *  G  S  I  T  P  K  R  S  P  I  H  N  H  N  D  R  R  K  H  L  N  L  V  L  Q  N  R  *  T  L  P  I  K  L  N  N  T  H  L  D  N  H  Y  *  Q  L  Q  T  I  R  N  N  G  R  S  L  T  S  T  *  L  L  M  L  N  R  T  C  R  R  A  K  F  K  S  *  S  C  W  E  P  I  Q  L  S  T  I  L  T  P  F  F  L  L  I  *  S  A  A  L  A  S  I  F  T  G  I  G  A  E  N  T  E  L  S  F  S  C  S  L  S  F  S  S  L  T  F  L  S  *  Y  P  S  F  L  E  M  *  F  G  S  I  S  L  S  L  L  P  L  Y  P  P  S  S  S  P  S  P  S  H  P  L  D  A  M  P  S  F  S  T  L  L  L  R  F  F  I  S  S  F  S  V  S  K  V  S  C  S  L  T  F  P  I  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0025E22.1" strand="-"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="92600" stop="92382"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>216</number_coding_nucleotides>
                  <number_encoded_amino_acids>72</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LPSSQALVLRTRNSHFRAHYHSHLSHSFHNTHPFLKCNLDPFHYHYFHYTLHLLPHHLHTPWMPCQAFQLFC*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="+" PGL_start="106268" PGL_stop="108419"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="106268" e_stop="106303"/>
            <exon e_start="107290" e_stop="107345"/>
            <exon e_start="107469" e_stop="107624"/>
            <exon e_start="107827" e_stop="108419"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.995" e_score="0.889"/>
          <exon-intron don_prob="1.000" acc_prob="0.979" e_score="1.000"/>
          <exon-intron don_prob="0.952" acc_prob="0.980" e_score="1.000"/>
          <exon-only e_score="0.985"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.889">
            <gDNA_exon_boundary e_start="106268" e_stop="106303" e_length="36"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.995">
            <gDNA_intron_boundary i_start="106304" i_stop="107289" i_length="986"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="107290" e_stop="107345" e_length="56"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="0.979">
            <gDNA_intron_boundary i_start="107346" i_stop="107468" i_length="123"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="107469" e_stop="107624" e_length="156"/>
          </exon>
          <intron i_serial="3" don_prob="0.952" acc_prob="0.980">
            <gDNA_intron_boundary i_start="107625" i_stop="107826" i_length="202"/>
          </intron>
          <exon e_serial="4" e_score="0.985">
            <gDNA_exon_boundary e_start="107827" e_stop="108419" e_length="593"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="106268" stop="106303"/>
              <exon start="107290" stop="107345"/>
              <exon start="107469" stop="107624"/>
              <exon start="107827" stop="108419"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U573429" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTACCCTTGAAGGTGTCAACAAGTGCTCTTCCATTG : ATTGTTTAGGTAGACGATTAGGACCATCACTTTTAGGACGAACTGATGATACAGGG : AAGCTGGTCAAGGATTTTGTTAAGATCCTCAATCAAGTGAACACTGAAGAAGTGCCTGATGGCCTGAAGCTCCCAGAGTCCTTTAGTCAACTTGTTGCTGAAATGAAAAACAACAAGTACAGTGCAAAAGAATTTGCTTTGGTTTTAAAGGGAATG : ATGGAGAAATCTGAAAGAGAGATTAGGGAATCAAAGTTTGCAGAGCTGACAAATAAACACTTTGCTGCAAGTGCAATTCCCAAAGGCATTCATTGTCTTTCGCTGCGGTTGACTGATGAGTACTCCACAAATGCTCATGCACGCAGACAGTTGCCTTCACCAGAGCTACTCCCTCTGCTATCTGACAATTCATTGCAACACTTTGTAGTGGCCACTGACAACATCCTGGCTGCCTCAGTTGTGGTCAATTCTGCTGTGCAGTCAACTCTGAAGCCTGAAAAGATTGTTTTCCATGTCATCACCGACAAGAAAACGTATGCAGGCATGCACTCATGGTTTGCTCTGAATCCTGTCACTCCAGCTCTTGTGGAGGTTAAAGGTGTTCATCAGTTTGACTGGTTGACTAGAGAAAATGTTCCCGTGCTTGAAGCAGTCGAGAGCCATAATGTTATTCGTAAATACTACCATGGAAATCATGTTACAGGTGCCAATCTCAGTGATACAACTCCGCGATCTTTTGCATCAAAGTTGCAGGCTAGAAGTCCAAAGTATATCTCTTTGCTGAATCATCTTCGCATATATTTGCCAGAGGT</gDNA_template>
            <first_frame> L  P  L  K  V  S  T  S  A  L  P  L  :  I  V  *  V  D  D  *  D  H  H  F  *  D  E  L  M  I  Q  G :   S  W  S  R  I  L  L  R  S  S  I  K  *  T  L  K  K  C  L  M  A  *  S  S  Q  S  P  L  V  N  L  L  L  K  *  K  T  T  S  T  V  Q  K  N  L  L  W  F  *  R  E  * :   W  R  N  L  K  E  R  L  G  N  Q  S  L  Q  S  *  Q  I  N  T  L  L  Q  V  Q  F  P  K  A  F  I  V  F  R  C  G  *  L  M  S  T  P  Q  M  L  M  H  A  D  S  C  L  H  Q  S  Y  S  L  C  Y  L  T  I  H  C  N  T  L  *  W  P  L  T  T  S  W  L  P  Q  L  W  S  I  L  L  C  S  Q  L  *  S  L  K  R  L  F  S  M  S  S  P  T  R  K  R  M  Q  A  C  T  H  G  L  L  *  I  L  S  L  Q  L  L  W  R  L  K  V  F  I  S  L  T  G  *  L  E  K  M  F  P  C  L  K  Q  S  R  A  I  M  L  F  V  N  T  T  M  E  I  M  L  Q  V  P  I  S  V  I  Q  L  R  D  L  L  H  Q  S  C  R  L  E  V  Q  S  I  S  L  C  *  I  I  F  A  Y  I  C  Q  R  </first_frame>
            <second_frame>  Y  P  *  R  C  Q  Q  V  L  F  H  * :   L  F  R  *  T  I  R  T  I  T  F  R  T  N  *  *  Y  R   : E  A  G  Q  G  F  C  *  D  P  Q  S  S  E  H  *  R  S  A  *  W  P  E  A  P  R  V  L  *  S  T  C  C  *  N  E  K  Q  Q  V  Q  C  K  R  I  C  F  G  F  K  G  N   : D  G  E  I  *  K  R  D  *  G  I  K  V  C  R  A  D  K  *  T  L  C  C  K  C  N  S  Q  R  H  S  L  S  F  A  A  V  D  *  *  V  L  H  K  C  S  C  T  Q  T  V  A  F  T  R  A  T  P  S  A  I  *  Q  F  I  A  T  L  C  S  G  H  *  Q  H  P  G  C  L  S  C  G  Q  F  C  C  A  V  N  S  E  A  *  K  D  C  F  P  C  H  H  R  Q  E  N  V  C  R  H  A  L  M  V  C  S  E  S  C  H  S  S  S  C  G  G  *  R  C  S  S  V  *  L  V  D  *  R  K  C  S  R  A  *  S  S  R  E  P  *  C  Y  S  *  I  L  P  W  K  S  C  Y  R  C  Q  S  Q  *  Y  N  S  A  I  F  C  I  K  V  A  G  *  K  S  K  V  Y  L  F  A  E  S  S  S  H  I  F  A  R  G </second_frame>
            <third_frame>   T  L  E  G  V  N  K  C  S  S  I   : D  C  L  G  R  R  L  G  P  S  L  L  G  R  T  D  D  T  G  :  K  L  V  K  D  F  V  K  I  L  N  Q  V  N  T  E  E  V  P  D  G  L  K  L  P  E  S  F  S  Q  L  V  A  E  M  K  N  N  K  Y  S  A  K  E  F  A  L  V  L  K  G  M  :  M  E  K  S  E  R  E  I  R  E  S  K  F  A  E  L  T  N  K  H  F  A  A  S  A  I  P  K  G  I  H  C  L  S  L  R  L  T  D  E  Y  S  T  N  A  H  A  R  R  Q  L  P  S  P  E  L  L  P  L  L  S  D  N  S  L  Q  H  F  V  V  A  T  D  N  I  L  A  A  S  V  V  V  N  S  A  V  Q  S  T  L  K  P  E  K  I  V  F  H  V  I  T  D  K  K  T  Y  A  G  M  H  S  W  F  A  L  N  P  V  T  P  A  L  V  E  V  K  G  V  H  Q  F  D  W  L  T  R  E  N  V  P  V  L  E  A  V  E  S  H  N  V  I  R  K  Y  Y  H  G  N  H  V  T  G  A  N  L  S  D  T  T  P  R  S  F  A  S  K  L  Q  A  R  S  P  K  Y  I  S  L  L  N  H  L  R  I  Y  L  P  E   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0025E22.1" strand="+"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="106270" stop="106303"/>
                    <exon start="107290" stop="107345"/>
                    <exon start="107469" stop="107624"/>
                    <exon start="107827" stop="108417"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>837</number_coding_nucleotides>
                  <number_encoded_amino_acids>279</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TLEGVNKCSSIDCLGRRLGPSLLGRTDDTGKLVKDFVKILNQVNTEEVPDGLKLPESFSQLVAEMKNNKYSAKEFALVLKGMMEKSEREIRESKFAELTNKHFAASAIPKGIHCLSLRLTDEYSTNAHARRQLPSPELLPLLSDNSLQHFVVATDNILAASVVVNSAVQSTLKPEKIVFHVITDKKTYAGMHSWFALNPVTPALVEVKGVHQFDWLTRENVPVLEAVESHNVIRKYYHGNHVTGANLSDTTPRSFASKLQARSPKYISLLNHLRIYLPE</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="+" PGL_start="109720" PGL_stop="110156"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="109720" e_stop="109762"/>
            <exon e_start="110028" e_stop="110156"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.946" acc_prob="0.959" e_score="0.977"/>
          <exon-only e_score="0.992"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.977">
            <gDNA_exon_boundary e_start="109720" e_stop="109762" e_length="43"/>
          </exon>
          <intron i_serial="1" don_prob="0.946" acc_prob="0.959">
            <gDNA_intron_boundary i_start="109763" i_stop="110027" i_length="265"/>
          </intron>
          <exon e_serial="2" e_score="0.992">
            <gDNA_exon_boundary e_start="110028" e_stop="110156" e_length="129"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="109720" stop="109762"/>
              <exon start="110028" stop="110156"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U602446" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GAAAACGAATATTACAAATACCTATCATGCATGGCTTAAAGAG : AATCTGAAGTCGAACTTGACAATGTGGAAGCTTGGGACATTACCTCCTGCTTTGATTGCATTCAAGGGTCATGTTCACCCCATTGACGCCTCGTGGCACATGCTTGGCTTGGGATATCAGAGTAAGACC</gDNA_template>
            <first_frame> E  N  E  Y  Y  K  Y  L  S  C  M  A  *  R   : E  S  E  V  E  L  D  N  V  E  A  W  D  I  T  S  C  F  D  C  I  Q  G  S  C  S  P  H  *  R  L  V  A  H  A  W  L  G  I  S  E  *  D  </first_frame>
            <second_frame>  K  T  N  I  T  N  T  Y  H  A  W  L  K  E  :  N  L  K  S  N  L  T  M  W  K  L  G  T  L  P  P  A  L  I  A  F  K  G  H  V  H  P  I  D  A  S  W  H  M  L  G  L  G  Y  Q  S  K  T </second_frame>
            <third_frame>   K  R  I  L  Q  I  P  I  M  H  G  L  K  R :   I  *  S  R  T  *  Q  C  G  S  L  G  H  Y  L  L  L  *  L  H  S  R  V  M  F  T  P  L  T  P  R  G  T  C  L  A  W  D  I  R  V  R   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02SLm0025E22.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="+" PGL_start="110235" PGL_stop="110891"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="110235" e_stop="110891"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="110235" e_stop="110891" e_length="657"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="110235" stop="110891"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U586015" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CATCTCCGTCCTTTTTGGACCAAGTTCGTTAACAGCTCCAATGATTTTATCAGTAATTGCCACATACTGGAGTAGTCTACAGATTTTCCATCAAGGAAAAAACACAGGAGAATTTTGGAAGCCCACAGGCTTTGCAAACTTTTTATTGGTTCTAGGGAAGTTCAACAACTCCCATTGATGAGAAGGAGATTCTGACAATTGCCCGGATATGTTCAGGTTTCCACATTTGATACTTTAAAAGAGAAGCATGGGCATAAGATTCATTCTTTCAATATGTAAAATAGAAGTTGGTCACATAATTCTATTGATTGGACAAAGGACAATATTTTTGGCCTCTTATACTCTCTATTATACTATAGCTTAAGAGGCAATGATAGTGCATCCCAGGAAATGCTCATCATTGCCATCATCAGTCATACAAATTGGTGAATTTGCGAGAAGAAAAGCTAGGCGCTGCGCCCTGTTAGCTGCAGAGATCATTTTTCCTTGTTAATTTTGTTGTCATTACTTCATTCAATCATATTAGACTGTTGTAGGCTATGAAACTTGCATCACATAGTTGGATAAACCCGTAGATTATTACATTTGCTACTTGTTTTGTATGATTCAATGATATGTGCAGATTCATTTTTACCAAAAATTTCTCCAGTTTTTGCT</gDNA_template>
            <first_frame> H  L  R  P  F  W  T  K  F  V  N  S  S  N  D  F  I  S  N  C  H  I  L  E  *  S  T  D  F  P  S  R  K  K  H  R  R  I  L  E  A  H  R  L  C  K  L  F  I  G  S  R  E  V  Q  Q  L  P  L  M  R  R  R  F  *  Q  L  P  G  Y  V  Q  V  S  T  F  D  T  L  K  E  K  H  G  H  K  I  H  S  F  N  M  *  N  R  S  W  S  H  N  S  I  D  W  T  K  D  N  I  F  G  L  L  Y  S  L  L  Y  Y  S  L  R  G  N  D  S  A  S  Q  E  M  L  I  I  A  I  I  S  H  T  N  W  *  I  C  E  K  K  S  *  A  L  R  P  V  S  C  R  D  H  F  S  L  L  I  L  L  S  L  L  H  S  I  I  L  D  C  C  R  L  *  N  L  H  H  I  V  G  *  T  R  R  L  L  H  L  L  L  V  L  Y  D  S  M  I  C  A  D  S  F  L  P  K  I  S  P  V  F  A </first_frame>
            <second_frame>  I  S  V  L  F  G  P  S  S  L  T  A  P  M  I  L  S  V  I  A  T  Y  W  S  S  L  Q  I  F  H  Q  G  K  N  T  G  E  F  W  K  P  T  G  F  A  N  F  L  L  V  L  G  K  F  N  N  S  H  *  *  E  G  D  S  D  N  C  P  D  M  F  R  F  P  H  L  I  L  *  K  R  S  M  G  I  R  F  I  L  S  I  C  K  I  E  V  G  H  I  I  L  L  I  G  Q  R  T  I  F  L  A  S  Y  T  L  Y  Y  T  I  A  *  E  A  M  I  V  H  P  R  K  C  S  S  L  P  S  S  V  I  Q  I  G  E  F  A  R  R  K  A  R  R  C  A  L  L  A  A  E  I  I  F  P  C  *  F  C  C  H  Y  F  I  Q  S  Y  *  T  V  V  G  Y  E  T  C  I  T  *  L  D  K  P  V  D  Y  Y  I  C  Y  L  F  C  M  I  Q  *  Y  V  Q  I  H  F  Y  Q  K  F  L  Q  F  L   </second_frame>
            <third_frame>   S  P  S  F  L  D  Q  V  R  *  Q  L  Q  *  F  Y  Q  *  L  P  H  T  G  V  V  Y  R  F  S  I  K  E  K  T  Q  E  N  F  G  S  P  Q  A  L  Q  T  F  Y  W  F  *  G  S  S  T  T  P  I  D  E  K  E  I  L  T  I  A  R  I  C  S  G  F  H  I  *  Y  F  K  R  E  A  W  A  *  D  S  F  F  Q  Y  V  K  *  K  L  V  T  *  F  Y  *  L  D  K  G  Q  Y  F  W  P  L  I  L  S  I  I  L  *  L  K  R  Q  *  *  C  I  P  G  N  A  H  H  C  H  H  Q  S  Y  K  L  V  N  L  R  E  E  K  L  G  A  A  P  C  *  L  Q  R  S  F  F  L  V  N  F  V  V  I  T  S  F  N  H  I  R  L  L  *  A  M  K  L  A  S  H  S  W  I  N  P  *  I  I  T  F  A  T  C  F  V  *  F  N  D  M  C  R  F  I  F  T  K  N  F  S  S  F  C  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02SLm0025E22.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="15" PGL_strand="+" PGL_start="112131" PGL_stop="115093"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="112131" e_stop="112281"/>
            <exon e_start="112608" e_stop="112913"/>
            <exon e_start="114270" e_stop="114434"/>
            <exon e_start="114592" e_stop="114682"/>
            <exon e_start="114755" e_stop="115093"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.948" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.984" acc_prob="0.722" e_score="1.000"/>
          <exon-intron don_prob="0.916" acc_prob="0.831" e_score="1.000"/>
          <exon-only e_score="0.994"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="112131" e_stop="112281" e_length="151"/>
          </exon>
          <intron i_serial="1" don_prob="0.948" acc_prob="0.997">
            <gDNA_intron_boundary i_start="112282" i_stop="112607" i_length="326"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="112608" e_stop="112913" e_length="306"/>
          </exon>
          <intron i_serial="2" don_prob="0.995" acc_prob="0.989">
            <gDNA_intron_boundary i_start="112914" i_stop="114269" i_length="1356"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="114270" e_stop="114434" e_length="165"/>
          </exon>
          <intron i_serial="3" don_prob="0.984" acc_prob="0.722">
            <gDNA_intron_boundary i_start="114435" i_stop="114591" i_length="157"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="114592" e_stop="114682" e_length="91"/>
          </exon>
          <intron i_serial="4" don_prob="0.916" acc_prob="0.831">
            <gDNA_intron_boundary i_start="114683" i_stop="114754" i_length="72"/>
          </intron>
          <exon e_serial="5" e_score="0.994">
            <gDNA_exon_boundary e_start="114755" e_stop="115093" e_length="339"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="112131" stop="112281"/>
              <exon start="112608" stop="112913"/>
              <exon start="114270" stop="114434"/>
              <exon start="114592" stop="114682"/>
              <exon start="114755" stop="115093"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U571890" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="112209" stop="112281"/>
              <exon start="112608" stop="112811"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U587444" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTTTATTGTTAATGCATTACACGTATTACCTACCCTTTCCTTTTCTTCTTCCCTATACTAGTTTTGTAGCTCTATCTGTCTTGAGGAATATCATATGTAATTACTTTGTTCGGTAAACAGTGGACAGTTTCCAGATCAGTTTCTCTTAACA : ATTTAAGGCTGGGATTTGGGAATTTGATGAGATCCATAAAGTGTCAAGAACCAAAGACTAAATTCTTTGGTCTTGGGAGCTTCAGTGATTGTGTTAATTAAGGCTGAACAGGTTACAGGAAGATCCTAGTAAAAGATCCTTGTGTTGGGTTTGTTTTGTAAGTTAGAACAAGGATGTCTGCAGCTCAAGATCAACTGGAGATTAAGTTTAGATTGATTGATGGAACAGATATTGGGCCCAAGAGTTTTTCTGCGGCTACAAGCGTAGCAACCTTAAAGGAGAACATCCTTGCTCAGTGGCCCAGAG : AGAAGGATAATGGTCCGCGGACAGTAAAAGATGTTAAGTTAATCAGCGCTGGAAGAATATTGGAAAACAACAGAACAGTGGCTGAATGCAGAAGCCCGCTATGTGATATTCCCGGAGGAGTCACGACCATGCATGTGGTTGTTCAACCACCAGCTCAGGAGAAAG : AGAAAAAAGCGTCAGATGACATGAAGCAGAATAAGTGCCTCTGCGTTATACTATGATATTCAGTTCCAACAGGGGGATGGCTATATGCAAG : ATAAAGACTGGTGGTGGTTGTTAACAATACTGAAGTTGATGAAGTAGTAACAAACAAACATGAGTTGTTGGCATTCCTTCCTTGTATTCTCAAGATCGTGTATGGTCTGGTCTCGTCATTTTCTTTTGTATTTGCTGCTTTCTTTTTTAGTGCTTGATGGATTCAAAGTCCATTCTGCATTGATTGAAAATTTGTGTTGCTGTCAAGTATACCATTTCTTTTCTGTAGGACTCTGTTGTCTGTACAAAATACGAATGAACTCGTTGGCTGAATTCATAATTTAATCTTGAATATCTTCTTATGGTGATCAATGTATAATATATAGATACAAAAAATTGT</gDNA_template>
            <first_frame> F  Y  C  *  C  I  T  R  I  T  Y  P  F  L  F  F  F  P  I  L  V  L  *  L  Y  L  S  *  G  I  S  Y  V  I  T  L  F  G  K  Q  W  T  V  S  R  S  V  S  L  N   : N  L  R  L  G  F  G  N  L  M  R  S  I  K  C  Q  E  P  K  T  K  F  F  G  L  G  S  F  S  D  C  V  N  *  G  *  T  G  Y  R  K  I  L  V  K  D  P  C  V  G  F  V  L  *  V  R  T  R  M  S  A  A  Q  D  Q  L  E  I  K  F  R  L  I  D  G  T  D  I  G  P  K  S  F  S  A  A  T  S  V  A  T  L  K  E  N  I  L  A  Q  W  P  R   : E  K  D  N  G  P  R  T  V  K  D  V  K  L  I  S  A  G  R  I  L  E  N  N  R  T  V  A  E  C  R  S  P  L  C  D  I  P  G  G  V  T  T  M  H  V  V  V  Q  P  P  A  Q  E  K   : E  K  K  A  S  D  D  M  K  Q  N  K  C  L  C  V  I  L  *  Y  S  V  P  T  G  G  W  L  Y  A  R :   *  R  L  V  V  V  V  N  N  T  E  V  D  E  V  V  T  N  K  H  E  L  L  A  F  L  P  C  I  L  K  I  V  Y  G  L  V  S  S  F  S  F  V  F  A  A  F  F  F  S  A  *  W  I  Q  S  P  F  C  I  D  *  K  F  V  L  L  S  S  I  P  F  L  F  C  R  T  L  L  S  V  Q  N  T  N  E  L  V  G  *  I  H  N  L  I  L  N  I  F  L  W  *  S  M  Y  N  I  *  I  Q  K  I   </first_frame>
            <second_frame>  F  I  V  N  A  L  H  V  L  P  T  L  S  F  S  S  S  L  Y  *  F  C  S  S  I  C  L  E  E  Y  H  M  *  L  L  C  S  V  N  S  G  Q  F  P  D  Q  F  L  L  T  :  I  *  G  W  D  L  G  I  *  *  D  P  *  S  V  K  N  Q  R  L  N  S  L  V  L  G  A  S  V  I  V  L  I  K  A  E  Q  V  T  G  R  S  *  *  K  I  L  V  L  G  L  F  C  K  L  E  Q  G  C  L  Q  L  K  I  N  W  R  L  S  L  D  *  L  M  E  Q  I  L  G  P  R  V  F  L  R  L  Q  A  *  Q  P  *  R  R  T  S  L  L  S  G  P  E  :  R  R  I  M  V  R  G  Q  *  K  M  L  S  *  S  A  L  E  E  Y  W  K  T  T  E  Q  W  L  N  A  E  A  R  Y  V  I  F  P  E  E  S  R  P  C  M  W  L  F  N  H  Q  L  R  R  K  :  R  K  K  R  Q  M  T  *  S  R  I  S  A  S  A  L  Y  Y  D  I  Q  F  Q  Q  G  D  G  Y  M  Q   : D  K  D  W  W  W  L  L  T  I  L  K  L  M  K  *  *  Q  T  N  M  S  C  W  H  S  F  L  V  F  S  R  S  C  M  V  W  S  R  H  F  L  L  Y  L  L  L  S  F  L  V  L  D  G  F  K  V  H  S  A  L  I  E  N  L  C  C  C  Q  V  Y  H  F  F  S  V  G  L  C  C  L  Y  K  I  R  M  N  S  L  A  E  F  I  I  *  S  *  I  S  S  Y  G  D  Q  C  I  I  Y  R  Y  K  K  L  </second_frame>
            <third_frame>   L  L  L  M  H  Y  T  Y  Y  L  P  F  P  F  L  L  P  Y  T  S  F  V  A  L  S  V  L  R  N  I  I  C  N  Y  F  V  R  *  T  V  D  S  F  Q  I  S  F  S  *  Q :   F  K  A  G  I  W  E  F  D  E  I  H  K  V  S  R  T  K  D  *  I  L  W  S  W  E  L  Q  *  L  C  *  L  R  L  N  R  L  Q  E  D  P  S  K  R  S  L  C  W  V  C  F  V  S  *  N  K  D  V  C  S  S  R  S  T  G  D  *  V  *  I  D  *  W  N  R  Y  W  A  Q  E  F  F  C  G  Y  K  R  S  N  L  K  G  E  H  P  C  S  V  A  Q  R :   E  G  *  W  S  A  D  S  K  R  C  *  V  N  Q  R  W  K  N  I  G  K  Q  Q  N  S  G  *  M  Q  K  P  A  M  *  Y  S  R  R  S  H  D  H  A  C  G  C  S  T  T  S  S  G  E  R :   E  K  S  V  R  *  H  E  A  E  *  V  P  L  R  Y  T  M  I  F  S  S  N  R  G  M  A  I  C  K  :  I  K  T  G  G  G  C  *  Q  Y  *  S  *  *  S  S  N  K  Q  T  *  V  V  G  I  P  S  L  Y  S  Q  D  R  V  W  S  G  L  V  I  F  F  C  I  C  C  F  L  F  *  C  L  M  D  S  K  S  I  L  H  *  L  K  I  C  V  A  V  K  Y  T  I  S  F  L  *  D  S  V  V  C  T  K  Y  E  *  T  R  W  L  N  S  *  F  N  L  E  Y  L  L  M  V  I  N  V  *  Y  I  D  T  K  N  C </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0025E22.1" strand="+"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="112769" stop="112913"/>
                    <exon start="114270" stop="114434"/>
                    <exon start="114592" stop="114647"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>363</number_coding_nucleotides>
                  <number_encoded_amino_acids>121</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VRTRMSAAQDQLEIKFRLIDGTDIGPKSFSAATSVATLKENILAQWPREKDNGPRTVKDVKLISAGRILENNRTVAECRSPLCDIPGGVTTMHVVVQPPAQEKEKKASDDMKQNKCLCVIL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0025E22.1" strand="+"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="114805" stop="115038"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>231</number_coding_nucleotides>
                  <number_encoded_amino_acids>77</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QTNMSCWHSFLVFSRSCMVWSRHFLLYLLLSFLVLDGFKVHSALIENLCCCQVYHFFSVGLCCLYKIRMNSLAEFII*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="114168" e_stop="114900"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.992"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.992">
            <gDNA_exon_boundary e_start="114168" e_stop="114900" e_length="733"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="114168" stop="114900"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U587442" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTGCTATTAATTTTCTTTCTATAGTCTTTTGTTAAGTATTGGGTTCAATCTTGTTACAAGTTTTCAAGTCATGTTTTCTGAGACATATATCTTATGTAATAGAGAAGGATAATGGTCCGCGGACAGTAAAAGATGTTAAGTTAATCAGCGCTGGAAGAATATTGGAAAACAACAGAACAGTGGCTGAATGCAGAAGCCCGCTATGTGATATTCCCGGAGGAGTCACGACCATGCATGTGGTTGTTCAACCACCAGCTCAGGAGAAAGGTCAGCTTAGATTTACTAAACATATCAACGCCATATAAAACAGTATTTACTGCCTTTAGGATGTTTGATTTCCATTCTGTGTTTTACGTTCTTTTTAGTTGTGTCGCTGTCTCTGAACAAAATGTTTGTTGTTTGAATTTTGCTACTGGTGAAACAGAGAAAAAAGCGTCAGATGACATGAAGCAGAATAAGTGCCTCTGCGTTATACTATGATATTCAGTTCCAACAGGGGGATGGCTATATGCAAGGTAGGTAGTTGCTTTTCGTCATCGACAGATATCAAGGTCTGTAAACTGATGTTTTGGACCCTCTACTTTCAGATAAAGACTGGTGGTGGTTGTTAACAATACTGAAGTTGATGAAGTAGTAACAAACAAACATGAGTTGTTGGCATTCCTTCCTTGTATTCTCAAGATCGTGTATGGTCTGGTCTCGTCATTTTCTTTTGTATTTGCTGCTTTCTTTT</gDNA_template>
            <first_frame> L  L  L  I  F  F  L  *  S  F  V  K  Y  W  V  Q  S  C  Y  K  F  S  S  H  V  F  *  D  I  Y  L  M  *  *  R  R  I  M  V  R  G  Q  *  K  M  L  S  *  S  A  L  E  E  Y  W  K  T  T  E  Q  W  L  N  A  E  A  R  Y  V  I  F  P  E  E  S  R  P  C  M  W  L  F  N  H  Q  L  R  R  K  V  S  L  D  L  L  N  I  S  T  P  Y  K  T  V  F  T  A  F  R  M  F  D  F  H  S  V  F  Y  V  L  F  S  C  V  A  V  S  E  Q  N  V  C  C  L  N  F  A  T  G  E  T  E  K  K  A  S  D  D  M  K  Q  N  K  C  L  C  V  I  L  *  Y  S  V  P  T  G  G  W  L  Y  A  R  *  V  V  A  F  R  H  R  Q  I  S  R  S  V  N  *  C  F  G  P  S  T  F  R  *  R  L  V  V  V  V  N  N  T  E  V  D  E  V  V  T  N  K  H  E  L  L  A  F  L  P  C  I  L  K  I  V  Y  G  L  V  S  S  F  S  F  V  F  A  A  F  F  </first_frame>
            <second_frame>  C  Y  *  F  S  F  Y  S  L  L  L  S  I  G  F  N  L  V  T  S  F  Q  V  M  F  S  E  T  Y  I  L  C  N  R  E  G  *  W  S  A  D  S  K  R  C  *  V  N  Q  R  W  K  N  I  G  K  Q  Q  N  S  G  *  M  Q  K  P  A  M  *  Y  S  R  R  S  H  D  H  A  C  G  C  S  T  T  S  S  G  E  R  S  A  *  I  Y  *  T  Y  Q  R  H  I  K  Q  Y  L  L  P  L  G  C  L  I  S  I  L  C  F  T  F  F  L  V  V  S  L  S  L  N  K  M  F  V  V  *  I  L  L  L  V  K  Q  R  K  K  R  Q  M  T  *  S  R  I  S  A  S  A  L  Y  Y  D  I  Q  F  Q  Q  G  D  G  Y  M  Q  G  R  *  L  L  F  V  I  D  R  Y  Q  G  L  *  T  D  V  L  D  P  L  L  S  D  K  D  W  W  W  L  L  T  I  L  K  L  M  K  *  *  Q  T  N  M  S  C  W  H  S  F  L  V  F  S  R  S  C  M  V  W  S  R  H  F  L  L  Y  L  L  L  S  F </second_frame>
            <third_frame>   A  I  N  F  L  S  I  V  F  C  *  V  L  G  S  I  L  L  Q  V  F  K  S  C  F  L  R  H  I  S  Y  V  I  E  K  D  N  G  P  R  T  V  K  D  V  K  L  I  S  A  G  R  I  L  E  N  N  R  T  V  A  E  C  R  S  P  L  C  D  I  P  G  G  V  T  T  M  H  V  V  V  Q  P  P  A  Q  E  K  G  Q  L  R  F  T  K  H  I  N  A  I  *  N  S  I  Y  C  L  *  D  V  *  F  P  F  C  V  L  R  S  F  *  L  C  R  C  L  *  T  K  C  L  L  F  E  F  C  Y  W  *  N  R  E  K  S  V  R  *  H  E  A  E  *  V  P  L  R  Y  T  M  I  F  S  S  N  R  G  M  A  I  C  K  V  G  S  C  F  S  S  S  T  D  I  K  V  C  K  L  M  F  W  T  L  Y  F  Q  I  K  T  G  G  G  C  *  Q  Y  *  S  *  *  S  S  N  K  Q  T  *  V  V  G  I  P  S  L  Y  S  Q  D  R  V  W  S  G  L  V  I  F  F  C  I  C  C  F  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0025E22.1" strand="+"/>
                <serials PGL_serial="15" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="114312" stop="114647"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>333</number_coding_nucleotides>
                  <number_encoded_amino_acids>111</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SALEEYWKTTEQWLNAEARYVIFPEESRPCMWLFNHQLRRKVSLDLLNISTPYKTVFTAFRMFDFHSVFYVLFSCVAVSEQNVCCLNFATGETEKKASDDMKQNKCLCVIL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0025E22.1" strand="+"/>
                <serials PGL_serial="15" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="114203" stop="114472"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>267</number_coding_nucleotides>
                  <number_encoded_amino_acids>89</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VLGSILLQVFKSCFLRHISYVIEKDNGPRTVKDVKLISAGRILENNRTVAECRSPLCDIPGGVTTMHVVVQPPAQEKGQLRFTKHINAI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="112356" e_stop="112913"/>
            <exon e_start="114270" e_stop="114434"/>
            <exon e_start="114592" e_stop="114682"/>
            <exon e_start="114755" e_stop="114786"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.995" acc_prob="0.989" e_score="0.993"/>
          <exon-intron don_prob="0.984" acc_prob="0.722" e_score="1.000"/>
          <exon-intron don_prob="0.916" acc_prob="0.831" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.993">
            <gDNA_exon_boundary e_start="112356" e_stop="112913" e_length="558"/>
          </exon>
          <intron i_serial="1" don_prob="0.995" acc_prob="0.989">
            <gDNA_intron_boundary i_start="112914" i_stop="114269" i_length="1356"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="114270" e_stop="114434" e_length="165"/>
          </exon>
          <intron i_serial="2" don_prob="0.984" acc_prob="0.722">
            <gDNA_intron_boundary i_start="114435" i_stop="114591" i_length="157"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="114592" e_stop="114682" e_length="91"/>
          </exon>
          <intron i_serial="3" don_prob="0.916" acc_prob="0.831">
            <gDNA_intron_boundary i_start="114683" i_stop="114754" i_length="72"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="114755" e_stop="114786" e_length="32"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="112356" stop="112913"/>
              <exon start="114270" stop="114434"/>
              <exon start="114592" stop="114682"/>
              <exon start="114755" stop="114786"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U587443" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTGTCTGCAGTTTGAGTACTTATTTTAATGTTTTCTTGACTTTGGGTTGTTAAAATTTGTGATTTCTTGGTTAATTTTAACTCAAGATTCTTGAATTTCTTTCTTTTGGGTTGTTTAAATTGTAGTTTGACTATCTTTTCTTGATAATCTAATCTAATTCAAGAAAGTGTAATTATTTACCTGATTTTGTGTGGGTTTATGTATATTTTGTCGGTGTTAATATTATGAATTCATATTTTGTTTTTTATGAAGATTTAAGGCTGGGATTTGGGAATTTGATGAGATCCATAAAGTGTCAAGAACCAAAGACTAAATTCTTTGGTCTTGGGAGCTTCAGTGATTGTGTTAATTAAGGCTGAACAGGTTACAGGAAGATCCTAGTAAAAGATCCTTGTGTTGGGTTTGTTTTGTAAGTTAGAACAAGGATGTCTGCAGCTCAAGATCAACTGGAGATTAAGTTTAGATTGATTGATGGAACAGATATTGGGCCCAAGAGTTTTTCTGCGGCTACAAGCGTAGCAACCTTAAAGGAGAACATCCTTGCTCAGTGGCCCAGAG : AGAAGGATAATGGTCCGCGGACAGTAAAAGATGTTAAGTTAATCAGCGCTGGAAGAATATTGGAAAACAACAGAACAGTGGCTGAATGCAGAAGCCCGCTATGTGATATTCCCGGAGGAGTCACGACCATGCATGTGGTTGTTCAACCACCAGCTCAGGAGAAAG : AGAAAAAAGCGTCAGATGACATGAAGCAGAATAAGTGCCTCTGCGTTATACTATGATATTCAGTTCCAACAGGGGGATGGCTATATGCAAG : ATAAAGACTGGTGGTGGTTGTTAACAATACTG</gDNA_template>
            <first_frame> L  S  A  V  *  V  L  I  L  M  F  S  *  L  W  V  V  K  I  C  D  F  L  V  N  F  N  S  R  F  L  N  F  F  L  L  G  C  L  N  C  S  L  T  I  F  S  *  *  S  N  L  I  Q  E  S  V  I  I  Y  L  I  L  C  G  F  M  Y  I  L  S  V  L  I  L  *  I  H  I  L  F  F  M  K  I  *  G  W  D  L  G  I  *  *  D  P  *  S  V  K  N  Q  R  L  N  S  L  V  L  G  A  S  V  I  V  L  I  K  A  E  Q  V  T  G  R  S  *  *  K  I  L  V  L  G  L  F  C  K  L  E  Q  G  C  L  Q  L  K  I  N  W  R  L  S  L  D  *  L  M  E  Q  I  L  G  P  R  V  F  L  R  L  Q  A  *  Q  P  *  R  R  T  S  L  L  S  G  P  E  :  R  R  I  M  V  R  G  Q  *  K  M  L  S  *  S  A  L  E  E  Y  W  K  T  T  E  Q  W  L  N  A  E  A  R  Y  V  I  F  P  E  E  S  R  P  C  M  W  L  F  N  H  Q  L  R  R  K  :  R  K  K  R  Q  M  T  *  S  R  I  S  A  S  A  L  Y  Y  D  I  Q  F  Q  Q  G  D  G  Y  M  Q   : D  K  D  W  W  W  L  L  T  I  L </first_frame>
            <second_frame>  C  L  Q  F  E  Y  L  F  *  C  F  L  D  F  G  L  L  K  F  V  I  S  W  L  I  L  T  Q  D  S  *  I  S  F  F  W  V  V  *  I  V  V  *  L  S  F  L  D  N  L  I  *  F  K  K  V  *  L  F  T  *  F  C  V  G  L  C  I  F  C  R  C  *  Y  Y  E  F  I  F  C  F  L  *  R  F  K  A  G  I  W  E  F  D  E  I  H  K  V  S  R  T  K  D  *  I  L  W  S  W  E  L  Q  *  L  C  *  L  R  L  N  R  L  Q  E  D  P  S  K  R  S  L  C  W  V  C  F  V  S  *  N  K  D  V  C  S  S  R  S  T  G  D  *  V  *  I  D  *  W  N  R  Y  W  A  Q  E  F  F  C  G  Y  K  R  S  N  L  K  G  E  H  P  C  S  V  A  Q  R :   E  G  *  W  S  A  D  S  K  R  C  *  V  N  Q  R  W  K  N  I  G  K  Q  Q  N  S  G  *  M  Q  K  P  A  M  *  Y  S  R  R  S  H  D  H  A  C  G  C  S  T  T  S  S  G  E  R :   E  K  S  V  R  *  H  E  A  E  *  V  P  L  R  Y  T  M  I  F  S  S  N  R  G  M  A  I  C  K  :  I  K  T  G  G  G  C  *  Q  Y   </second_frame>
            <third_frame>   V  C  S  L  S  T  Y  F  N  V  F  L  T  L  G  C  *  N  L  *  F  L  G  *  F  *  L  K  I  L  E  F  L  S  F  G  L  F  K  L  *  F  D  Y  L  F  L  I  I  *  S  N  S  R  K  C  N  Y  L  P  D  F  V  W  V  Y  V  Y  F  V  G  V  N  I  M  N  S  Y  F  V  F  Y  E  D  L  R  L  G  F  G  N  L  M  R  S  I  K  C  Q  E  P  K  T  K  F  F  G  L  G  S  F  S  D  C  V  N  *  G  *  T  G  Y  R  K  I  L  V  K  D  P  C  V  G  F  V  L  *  V  R  T  R  M  S  A  A  Q  D  Q  L  E  I  K  F  R  L  I  D  G  T  D  I  G  P  K  S  F  S  A  A  T  S  V  A  T  L  K  E  N  I  L  A  Q  W  P  R   : E  K  D  N  G  P  R  T  V  K  D  V  K  L  I  S  A  G  R  I  L  E  N  N  R  T  V  A  E  C  R  S  P  L  C  D  I  P  G  G  V  T  T  M  H  V  V  V  Q  P  P  A  Q  E  K   : E  K  K  A  S  D  D  M  K  Q  N  K  C  L  C  V  I  L  *  Y  S  V  P  T  G  G  W  L  Y  A  R :   *  R  L  V  V  V  V  N  N  T  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0025E22.1" strand="+"/>
                <serials PGL_serial="15" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="112769" stop="112913"/>
                    <exon start="114270" stop="114434"/>
                    <exon start="114592" stop="114647"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>363</number_coding_nucleotides>
                  <number_encoded_amino_acids>121</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VRTRMSAAQDQLEIKFRLIDGTDIGPKSFSAATSVATLKENILAQWPREKDNGPRTVKDVKLISAGRILENNRTVAECRSPLCDIPGGVTTMHVVVQPPAQEKEKKASDDMKQNKCLCVIL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0025E22.1" strand="+"/>
                <serials PGL_serial="15" AGS_serial="3" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="112508" stop="112708"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>198</number_coding_nucleotides>
                  <number_encoded_amino_acids>66</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SNSRKCNYLPDFVWVYVYFVGVNIMNSYFVFYEDLRLGFGNLMRSIKCQEPKTKFFGLGSFSDCVN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 39 chains have been computed
$ 
$ memory statistics:
$ 40352 bytes spliced alignments in total
$ 18 spliced alignments have been stored
$ 2241 bytes was the average size of a spliced alignment
$ 23992 bytes predicted gene locations in total
$ 15 predicted gene locations have been stored
$ 1599 bytes was the average size of a predicted gene location
$ 1 megabytes was the average size of the backtrace matrix
$ 41 backtrace matrices have been allocated
$ 
$ date finished: 2009-12-01 11:27:16
-->
