<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-07-29 10:49:15"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_U_tomato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U600611" ref_strand="+" ref_description="SGN-U600611 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>tggggtaagacgtgaagttcatatgaaatgttaggtggcttgattgagggagtaattcttggttanacgaatctataaaaacaaatataatgtgtaattaaaacattatgaatgaaccatgaaatttccctaagaattaatgttaaacttgatgaaaaagtgaanaaaaatcgtanaataaatttccagaacttgaaaacagactttaaaagaatctggaaatttttgaacatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="+" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="18299" stop="19132"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18599" g_stop="18832" g_length="234"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="234" r_length="234" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="+" ref_id="SGN-U600611" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>234</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U600611" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18599" e_stop="18832"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGGGTAAGACGTGAAGTTCATATGAAATGTTAGGTGGCTTGATTGAGGGAGTAATTCTTGGTTAGACGAATCTATAAAAAAAAATATAATGTGTAATTAAAACATTATGAATGAACCATGAAATTTCCCTAAGAATTAATGTTAAACTTGATGAAAAAGTGAAGAAAAATCGTAGAATAAATTTCCAGAACTTGAAAACAGACTTTAAAAGAATCTGGAAATTTTTGAACATC</genome_strand>
        <mrna_strand>TGGGGTAAGACGTGAAGTTCATATGAAATGTTAGGTGGCTTGATTGAGGGAGTAATTCTTGGTTANACGAATCTATAAAAACAAATATAATGTGTAATTAAAACATTATGAATGAACCATGAAATTTCCCTAAGAATTAATGTTAAACTTGATGAAAAAGTGAANAAAAATCGTANAATAAATTTCCAGAACTTGAAAACAGACTTTAAAAGAATCTGGAAATTTTTGAACATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U600611" ref_strand="+" ref_description="SGN-U600611 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>tggggtaagacgtgaagttcatatgaaatgttaggtggcttgattgagggagtaattcttggttanacgaatctataaaaacaaatataatgtgtaattaaaacattatgaatgaaccatgaaatttccctaagaattaatgttaaacttgatgaaaaagtgaanaaaaatcgtanaataaatttccagaacttgaaaacagactttaaaagaatctggaaatttttgaacatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="+" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="26973" stop="27806"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="27273" g_stop="27506" g_length="234"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="234" r_length="234" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="+" ref_id="SGN-U600611" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>234</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U600611" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="27273" e_stop="27506"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGGGTAAGACGTGAAGTTCATATGAAATGTTAGGTGGCTTGATTGAGGGAGTAATTCTTGGTTAGACGAATCTATAAAAAAAAATATAATGTGTAATTAAAACATTATGAATGAACCATGAAATTTCCCTAAGAATTAATGTTAAACTTGATGAAAAAGTGAAGAAAAATCGTAGAATAAATTTCCAGAACTTGAAAACAGACTTTAAAAGAATCTGGAAATTTTTGAACATC</genome_strand>
        <mrna_strand>TGGGGTAAGACGTGAAGTTCATATGAAATGTTAGGTGGCTTGATTGAGGGAGTAATTCTTGGTTANACGAATCTATAAAAACAAATATAATGTGTAATTAAAACATTATGAATGAACCATGAAATTTCCCTAAGAATTAATGTTAAACTTGATGAAAAAGTGAANAAAAATCGTANAATAAATTTCCAGAACTTGAAAACAGACTTTAAAAGAATCTGGAAATTTTTGAACATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U589947" ref_strand="+" ref_description="SGN-U589947 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>gctcaaacacaaacaagtaaaaaatttgatttacatacttcacttctaaagctatactctgatcttattgatcttttggtttgtatatataatcctgaagcccaaacaaggtcttgcattctttgacccttgtgcatcccagtgtccccttcaaaattgttgatattgaaaggtccatatttgatacaccagttaactctggtttttatgatgttgtatatttgcatgcagtgaggatgacctgctttgcccagaatacatctctggtggggttcatctgagttcccttaacaaattgagtgcaaacaattgttcattcaagctttcaggatacatctcangtcctgatgtttacccagtggaagtatacaatgtggtgacggactgacggtttattttcagtcgaaaggccaagtatgaaatgaaacttgttaacatttggaatagcaaattacaagctcaaggggagtgcacaagtacacgtgatgggaagtc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="+" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="45013" stop="46385"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="45312" g_stop="45565" g_length="254"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="254" r_length="254" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="45566" i_stop="45666" i_length="101">
            <donor d_prob="0.769" d_score="1.00"/>
            <acceptor a_prob="0.412" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="45667" g_stop="45784" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="255" r_stop="372" r_length="118" r_score="0.992"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="45785" i_stop="45863" i_length="79">
            <donor d_prob="0.668" d_score="0.98"/>
            <acceptor a_prob="0.966" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="45864" g_stop="45900" g_length="37"/>
          <reference_exon_boundary r_type="cDNA" r_start="373" r_stop="409" r_length="37" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="45901" i_stop="45999" i_length="99">
            <donor d_prob="0.730" d_score="0.00"/>
            <acceptor a_prob="0.945" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="46000" g_stop="46085" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="410" r_stop="495" r_length="86" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="+" ref_id="SGN-U589947" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>495</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U589947" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="45312" e_stop="45565"/>
          <exon e_start="45667" e_stop="45784"/>
          <exon e_start="45864" e_stop="45900"/>
          <exon e_start="46000" e_stop="46085"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTCAAACACAAACAAGTAAAAAATTTGATTTACATACTTCACTTCTAAAGCTATACTCTGATCTTATTGATCTTTTGGTTTGTATATATAATCCTGAAGCCCAAACAAGGTCTTGCATTCTTTGACCCTTGTGCATCCCAGTGTCCCCTTCAAAATTGTTGATATTGAAAGGTCCATATTTGATACACCAGTTAACTCTGGTTTTTATGATGTTGTATATTTGCATGCAGTGAGGATGACCTGCTTTGCCCAGGTGCTTCTCCTTCTCCGTTGCACTATTGTCCAGTGGGTTTAGGATTCATCTGAGTTCCCTTAACTAATTGAGTGCAAGCAATTGTTCATTCATACTTTCAGAATACATCTCTGGTGGGGTTCATCTGAGTTCCCTTAACAAATTGAGTGCAAACAATTGTTCATTCAAGCTTTCAGGATACATCTCAGGTCCTGATGTTTACCCAGTGGAAGTATACAAGTATGGATAAAAGGATGTGATAAGTTATCTTTTCTACACTTTCTTTGATTCTAGCATTTAACTTCATTGAACATTACAGTGTGGTGACGGACTGACGGTTTATTTTCAGTCGAAAGGTAATGTTATTAAATTTCTTCGGAGGGTTAGGTGTCTTGCTGATATTATCTCAATCAAATATGTTAGTAACTCTCACAACCTGATGTTTCTCTTATCAGGCCAAGTATGAAATGAAACTTGTTAACATTTGGAATAGCAAATTACAAGCTCAAGGGGAGTGCACAAGTACACGTGATGGGAAGTC</genome_strand>
        <mrna_strand>GCTCAAACACAAACAAGTAAAAAATTTGATTTACATACTTCACTTCTAAAGCTATACTCTGATCTTATTGATCTTTTGGTTTGTATATATAATCCTGAAGCCCAAACAAGGTCTTGCATTCTTTGACCCTTGTGCATCCCAGTGTCCCCTTCAAAATTGTTGATATTGAAAGGTCCATATTTGATACACCAGTTAACTCTGGTTTTTATGATGTTGTATATTTGCATGCAGTGAGGATGACCTGCTTTGCCCAG.....................................................................................................AATACATCTCTGGTGGGGTTCATCTGAGTTCCCTTAACAAATTGAGTGCAAACAATTGTTCATTCAAGCTTTCAGGATACATCTCANGTCCTGATGTTTACCCAGTGGAAGTATACAA...............................................................................TGTGGTGACGGACTGACGGTTTATTTTCAGTCGAAAG...................................................................................................GCCAAGTATGAAATGAAACTTGTTAACATTTGGAATAGCAAATTACAAGCTCAAGGGGAGTGCACAAGTACACGTGATGGGAAGTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U586153" ref_strand="+" ref_description="SGN-U586153 Tomato 200607#2 [29 ESTs aligned] (*GB) gi|157345737|emb|CAO15035.1| (e_value=8e-61) unnamed; (*ATH) AT5G15350.1 (e_value=8e-43) | Symbol: None | plastocyanin-like domain-containing protein, contains plastocyanin-like domain Pfam:PF02298 | chr5:4984962-4986221 REVERSE | Aliases: F8M21.240, F8M21_240; (*SWP) sp|Q39131|LAML_ARATH (e_value=8e-42) Lamin-like protein OS=Arabidopsis thaliana GN=At5g15350; ">
      <seq>cggccgattaagaaggaagagcttagctaagaactctagaggttgcgagaagatattattgtagcaatggaggcggtgagaaggaggagctttggttggccgacaatggcggtggtgctaacatgcgctttgctcgtgatgctgcctcaagtgtactcgattcggtacattgtgggatcgagattcgggtggactaacagtgtcaattacaccaattgggctaaggacaaacatttctacaacggagactggctcttttttgtgtatgacaggaaccagatgaatgtgcttgagctaaacaagacagactacgagagctgcaatactgatcatcctctccacaattggactactggagcaggaagggacgttgttccgcttaatgtgactaaaacctactatttcgctagtggaaaaggatactgttatggaggcatgaaagtggctattcatgttgaaaaggcacctccacctccaaaagctgctccagtacgcagcagttcaacaaatttgctcaactcatttaaagcacagataatgataccagctcttttcgcaaccgctgctgtgtgggatgcatttcttctgctctggtaggatggttaagtgaaccatacatgctggatgcttcagataattagttaaaccaagtgtcaagaaagtgtttagatttattttttgtgtgcttgtattttcttttttcttgaaagttaccatctttttttttttttaccaccaagtgccattatcatttgacctgaaaatcaattttttatttcagatcaaattggtgtgtgggggttgatctgaaaaatttgtttatttatgttgttacctaaacaagtttacaattgtttcattggagaaattgattgcggaaaaaaaggggggggcccttcatgttactcttttcatttgttatacctctcttaattacttattgttgtatgttagctgtctcgatttgactttggagagttgcagtatattccaagtttatgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="+" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="48384" stop="51771"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="48684" g_stop="48930" g_length="247"/>
          <reference_exon_boundary r_type="cDNA" r_start="10" r_stop="256" r_length="247" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="48931" i_stop="50728" i_length="1798">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.854" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="50729" g_stop="51471" g_length="743"/>
          <reference_exon_boundary r_type="cDNA" r_start="257" r_stop="1002" r_length="746" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="+" ref_id="SGN-U586153" ref_strand="+">
        <total_alignment_score>0.985</total_alignment_score>
        <cumulative_length_of_scored_exons>990</cumulative_length_of_scored_exons>
        <coverage percentage="0.988" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U586153" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="48684" e_stop="48930"/>
          <exon e_start="50729" e_stop="51471"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGAAGGAAGAGCTTAGCTAAGAACTCTAGAGGTTGCGAGAAGATATTATTGTAGCAATGGAGGCGGTGAGAAGGAGGAGCTTTGGTTGGCCGACAATGGCGGTGGTGCTAACATGCGCTTTGCTCGTGATGCTGCCTCAAGTGTACTCGATTCGGTACATTGTGGGATCGAGATTCGGGTGGACTAACAGTGTCAATTACACCAATTGGGCTAAGGACAAACATTTCTACAACGGAGACTGGCTCTGTAAGCTCTAGATCTACTCTTCTTTCAGCTCATTCTTAAGATTTTCTTCTGTTCTTAGCTTGTTTCTACTAATAAGAAATTTGTCTGGATCTTAGATATACCCGGGGTTTAGTATAAATATGAGTATAATTTTGTTTCTATAGTTGGAGCTTGGAGCCTTAGTTTTCTGTTTAAGCTCTGTGGTTTACGCTGGGTTTCATTTATTTGCTTGCTGCTTTCTATAATTGGAGCTCTGCCTTTTCCGGTGCTCATTAGTAGGAGTGAACTTTCGGAAACTTTGATTGACTAGATGGTGCTAGATGGTGAAGGTCTGGTGTAAATTGCCTTTTTTTTTTTCTGTGAAGGAGTGAATTAGTTTCTAAGTAGAATTCTTCTGTGTCGTTCAGATCTATGTTTTTAGCTTGCATTTAGAATGGCATTTACTCTGTTTATACCTAATTTGAATTATAGAGTTTCCAGCTGGGCATTTTCGGTGATGAAAGTTTGAAGTTTTTCCTTTTTATGACTGCTTTTAGCTGGCAGCTTCTTCATAAAGGCAATGGTGTTCCGTTTGAAATTAAATGTTGCCCTTTCCTTTTTTGGGGGGGTTTATTTAGATCTAAATCGCACACATATGATACTGTTTTACAATGAATGAAAGCATAATCTTGAATTACTTGTCATTTTAGTGCTATAGTTGCGATGTCATAAACAGTCTCCACACGTTGTAATTTTCTCTTTTGGATATACATTTGTCCCCCGCATTTCCTTATATGCTGTTTGTTTTTATTATTATATCAAGAAGCTACAGTCGTGATACCACCATTCTCACACATAGTAAACTTCTCTTTTGGATGTACATTTACCCCCCGTATTTCCTTTATGCGGGTTGTTTTTACATAAAGAAGCTACAGTTGTGATATCACCTTTTACACATCGTAACGTTCTCTTTTGGATGTACGTTTGCCCCCAGTATTTCCTTTATGCTGGTTGTTTTTACATCAAGAATATTCCTTTATTTCTCATAAGAAGAAAAGAAGTTGTGTTATCCCCAAATTCATGCTGTATTCATGATCTTCACTGTCCGTAGTTTTGTGTGACTGTAGAGATGGCTAAGCAACTTCTCCAAACTTGTTTTTTCCATTTCTTAATGCATTAGCACAGATTAGCTGTTATGTTAGCCATTGATTAAAGAAATTGTTTTGTGCTTCTTGTCATTAGAAGGTAAATCCAATTTTCTTCCGGTGACTGTATAATTCTGTCTTTACTCTCAACTGTTTTTGTTTGGATCTGAAGTTCAAGTAACCACTTCTGTCTGACATTCTAATCTTTAAGCCAATTTGCAACAATTAAATGCTTATAAAAATGGATTTGGTAGGACATTATAGCTAAACAAAAGAGAAAAAACATTGGATAAGGCAACTATTCCAGCCACATGCTTAGATGTCAGCCTCATGGCTGATCCTGTCCAGAATCATCCAGTTGTTTAGTAGGGACAAATATTTTTGTCACAGTACTGGTTCCAGCTAATGCTCTGGACAAGCGTTGCTAATTTCTCTAATCTAGTTTAGTGCATAATGTGTAATCTATTGAAGAAATATTTTATCATTTTCAAACGGCTCGATGATGTTTAAGTGTGTACTTGTGCATGTACATGTGTAGTGTTTGCCGATTGCTATGCTTATCTTGCCTCGCAATAACTTAAAGACACATTACAAGTTATTCAGTCTGTATAGTATAGAACTCTTAGATTTGTAAAATATTGAGATATCTTCAGTTATTTGTCGTTGTTTAGTAACTCTTCCTTCTCCCATCCCAGTTTTTGTGTATGACAGGAACCAGATGAATGTGCTTGAGCTAAACAAGACAGACTACGAGAGCTGCAATACTGATCATCCTCTCCACAATTGGACTACTGGAGCAGGAAGGGACGTTGTTCCGCTTAATGTGACTAAAACCTACTATTTCGCTAGTGGAAAAGGATACTGTTATGGAGGCATGAAAGTGGCTATTCATGTTGAAAAGGCACCTCCACCTCCAAAAGCTGCTCCAGTACGCAGCAGTTCAACAAATTTGCTCAACTCATTTAAAGCACAGATAATGATACCAGCTCTTTTCGCAACCGCTGCTGTGTGGGATGCATTTCTTCTGCTCTGGTAGGATGGTTAAGTGAACCATACATGCTGGATGCTTCAGATAATTAGTTAAACCAAGTGTCAAGAAAGTGTTTAGATTTATTTTTTGTGTGCTTGTATTTTCTTTTTTCTTGAAAGTTACCATCTTTTTTTTTTTTTACCACCAAGTGCCATTATCATTTGACCTGAAAATCAATTTTTTATTTCAGATCAAATTGGTGTGTGGGGGTTGATCTGAAAAATTTGTTTATTTATGTTGTTACCTAAACAAGTTTACAATTGTTTCATTGGAGAAATTGATTGC-GTGGATCA--CGGAGACCTTTCATGTTACTCTTTTCATTTGTTATACCTCTCTTAATTACTTATTGTTGTATGTTAGCTGTCTCGATTTGACTTTGGAGAGTTGCAGTATATTCCAAGTTTATGC</genome_strand>
        <mrna_strand>AAGAAGGAAGAGCTTAGCTAAGAACTCTAGAGGTTGCGAGAAGATATTATTGTAGCAATGGAGGCGGTGAGAAGGAGGAGCTTTGGTTGGCCGACAATGGCGGTGGTGCTAACATGCGCTTTGCTCGTGATGCTGCCTCAAGTGTACTCGATTCGGTACATTGTGGGATCGAGATTCGGGTGGACTAACAGTGTCAATTACACCAATTGGGCTAAGGACAAACATTTCTACAACGGAGACTGGCTCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTGTGTATGACAGGAACCAGATGAATGTGCTTGAGCTAAACAAGACAGACTACGAGAGCTGCAATACTGATCATCCTCTCCACAATTGGACTACTGGAGCAGGAAGGGACGTTGTTCCGCTTAATGTGACTAAAACCTACTATTTCGCTAGTGGAAAAGGATACTGTTATGGAGGCATGAAAGTGGCTATTCATGTTGAAAAGGCACCTCCACCTCCAAAAGCTGCTCCAGTACGCAGCAGTTCAACAAATTTGCTCAACTCATTTAAAGCACAGATAATGATACCAGCTCTTTTCGCAACCGCTGCTGTGTGGGATGCATTTCTTCTGCTCTGGTAGGATGGTTAAGTGAACCATACATGCTGGATGCTTCAGATAATTAGTTAAACCAAGTGTCAAGAAAGTGTTTAGATTTATTTTTTGTGTGCTTGTATTTTCTTTTTTCTTGAAAGTTACCATCTTTTTTTTTTTTTACCACCAAGTGCCATTATCATTTGACCTGAAAATCAATTTTTTATTTCAGATCAAATTGGTGTGTGGGGGTTGATCTGAAAAATTTGTTTATTTATGTTGTTACCTAAACAAGTTTACAATTGTTTCATTGGAGAAATTGATTGCGGAAAAAAAGGGGGGGGCCCTTCATGTTACTCTTTTCATTTGTTATACCTCTCTTAATTACTTATTGTTGTATGTTAGCTGTCTCGATTTGACTTTGGAGAGTTGCAGTATATTCCAAGTTTATGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U582167" ref_strand="+" ref_description="SGN-U582167 Tomato 200607#2 [42 ESTs aligned] (*GB) gi|157345734|emb|CAO15032.1| (e_value=2e-144) unnamed; (*ATH) AT3G29185.1 (e_value=3e-140) | Symbol: None | similar to WRKY11 [Oryza sativa (japonica cultivar-group)] (GB:AAQ20911.1) | chr3:11156166-11158463 REVERSE | Aliases: MXO21.1; ">
      <seq>cggggtactaacaggaagaagcgtcccaattccatccgccatggcaacggcgccagccatttttgtgccttccacttctctcgcttcctccaatgcacgcaagattaatctaagttcatggaacgagaaactggttataccccaaaattttccattctggactcccaagtaccagtctaggaaaccaccgtcatgctccggtaccaatgtcacggtggtccaaggtgatcggaatacaaccgaactaccaatgagtattgacgctcttgacagtttcattcgccttaatttgggaaactggaccggctctttccatcaatttgatggtcatggaaatttgatgcatagaattacaacgaaacttgctgtgggctcttatggtgaaggtgaactgatgagtttattacaaacgttatacatcaaacaacctccatctaccacttcatgttctggcgatgattgtgagtcagagtggtttgagtacaaaatcaaagagaccaacatgtttaccgtcgacaaatatcaacagattggcttcttccccaaggaaaaggcatacgcactaagatatcagactgctggcatgttggagactgtgttaagacagggagtgctaggtgaagatgatatcggagaagaatcaccaagaaatctgaagcttccctctaaacgtccttctattgtatgtgaaaattgtctttattcactggagaaagataggcgagtgagagcatttcatataatggacccaaaaggagtactggaaatgcttcttgttttccttgaagaaagagggaacggagaggccattcctccctcctttgacgatttcaaggaggatactgaaagaattctgcctcatcttggaacttggaaaggtcattcgcgaacaacacgtactggtgtttatggagcaacaattactgaagcaagtacaactgctgttcttgaaatcaacaaggacggccagctaattcaggatatcacgtctacttctggtgcgactaatattacaacaaatgtacattggaccggtaccatatccaataacctagtgacattcgacggtggtttccagcttactctgttgcctgggggcatttacatgggatacccatctgatgtggccaagaatgtgcaagaatccacagcatttcacgttgagttttgttggctagaatcgcctggcaagagacaaagacttatccgtacttacgatgtagagggctttgctgtttcatctacttatttcatcgagtccaaggtctgagttatttcccctgattcaaaaagatgtgcttcagacatcatatttgctcccgcatgaaccatttttcctgggtacaatcaccaacactgtagtatcaattgtatctatctatctatatatctgtttttatatatag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="+" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="59111" stop="63359"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59409" g_stop="59724" g_length="316"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="316" r_length="316" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="59725" i_stop="59914" i_length="190">
            <donor d_prob="0.196" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="59915" g_stop="60009" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="317" r_stop="411" r_length="95" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="60010" i_stop="60743" i_length="734">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="60744" g_stop="60861" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="412" r_stop="529" r_length="118" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="60862" i_stop="60992" i_length="131">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.442" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="60993" g_stop="61111" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="530" r_stop="648" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="61112" i_stop="61789" i_length="678">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.762" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="61790" g_stop="61976" g_length="187"/>
          <reference_exon_boundary r_type="cDNA" r_start="649" r_stop="835" r_length="187" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="61977" i_stop="62107" i_length="131">
            <donor d_prob="0.869" d_score="1.00"/>
            <acceptor a_prob="0.974" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="62108" g_stop="62251" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="836" r_stop="979" r_length="144" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="62252" i_stop="62632" i_length="381">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.281" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="62633" g_stop="63059" g_length="427"/>
          <reference_exon_boundary r_type="cDNA" r_start="980" r_stop="1406" r_length="427" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="+" ref_id="SGN-U582167" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>1406</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U582167" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59409" e_stop="59724"/>
          <exon e_start="59915" e_stop="60009"/>
          <exon e_start="60744" e_stop="60861"/>
          <exon e_start="60993" e_stop="61111"/>
          <exon e_start="61790" e_stop="61976"/>
          <exon e_start="62108" e_stop="62251"/>
          <exon e_start="62633" e_stop="63059"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGGGTACTAACAGGAAGAAGCGTCCCAATTCCATCCGCCATGGCAACGGCGCCAGCCATTTTTGTGCCTTCCACTTCTCTCGCTTCCTCCAATGCACGCAAGATTAATCTAAGTTCATGGAACGAGAAACTGGTTATACCCCAAAATTTTCCATTCTGGACTCCCAAGTACCAGTCTAGGAAACCACCGTCATGCTCCGGTACCAATGTCACGGTGGTCCAAGGTGATCGGAATACAACCGAACTACCAATGAGTATTGACGCTCTTGACAGTTTCATTCGCCTTAATTTGGGAAACTGGACCGGCTCTTTCCATGTCAGGATCAACTCCGTTCCTCTTTCTCTCTTTCTGTGGATGCATTGTCTTATTTTTGTCTATAACTTTATTATTGATAAATACACGTATATTTATGAATTTTTGATAAATATTCATATCCTATAATTTTTAGTTTGAGGTGGAAACGTGCATGGATTTGATTCCTTCATCTGCTTGATTTATTTTGCAGCAATTTGATGGTCATGGAAATTTGATGCATAGAATTACAACGAAACTTGCTGTGGGCTCTTATGGTGAAGGTGAACTGATGAGTTTATTACAAACGTGAGCTCCTATAGTTAGATTCTTCCCTGTATTAATAATGTGTCTTAACCTTGCTATGTTTCCGATGAAAAGTAAGTTAAATAGATTAACTGTCCTTAACAATTTTGTAGCTTCTTCGGTGACTAATATGTGTAAAGTATATATGTTAGTTTATACATTCTAACTTTGAGAATGATCCAATCTAATTCTTTTTGTAATTGTGAAATTGCTAGTACTTATGTAATTAGTAATTTAATAAAATTAAAGGTAGTTGTTAGTTATCCGAAGTTAAAAAACTCTTTTGAGATTTAGGAAAAGTTAAATTAGAATTGAGGAGAAAACCATGGAAATTTCAATGTTTACACTTCATTTTACATGGTTATAGTTTAATGGTATGTAGGTGAACTTTAGGGAATACTTGGAAATCCAGGTGATCTCTTTTTCTTGTTTGTGAATTTTGAGAAATTTTCCATTTAGTGGCATGCTATATTTAAGTGCAAGTAGATTTTGTCAGCCCAAAGCTCAAATTCTTCCACTGTTTTAAATAAAGTTGAGTTTGGAGAATTTATTAAGGAGGCCAATGTCACACATGCATTTCTGATTCATAAGCCCCTTTAGTTTGCTTTTTTATCTGCATAGAATTAGTTAGCAGTGGACACCAATGTATAGGGTATTTTCATTAAATTTGGGTACTGTTATATGTGTTCACTTTATGGTCTGGGAAACAAGTCGACTAACCGGCTTCAAAATTGTAGGTTATACATCAAACAACCTCCATCTACCACTTCATGTTCTGGCGATGATTGTGAGTCAGAGTGGTTTGAGTACAAAATCAAAGAGACCAACATGTTTACCGTCGACAAATATCAACAGGTGAGCTTCACTAAGACAGAGAACTAACTTATATCCCTTCGCTGGTCATACTTAATAAAGACTGTTATCTGCAGTTTCTGTTTCTTTTCAGATTTTATTGCATTTGAGGTACCACTAAAAGTAGTTTGCAGATTGGCTTCTTCCCCAAGGAAAAGGCATACGCACTAAGATATCAGACTGCTGGCATGTTGGAGACTGTGTTAAGACAGGGAGTGCTAGGTGAAGATGATATCGGAGAAGAATCACCAAGGTAAATGTTTCTTACGTGGAGATGAATCAGTCAAAATAAGTTAAAATATTAGATCTGATGAGATCAAAGGTTGAAATTATGCATATGTTTTGCTGCTAGCTTTATTTTGGAAATGCTACCCAGTATGACCTTAATGTTGCTGTTTGTCACTTTTCCCCTTGGCTCTGCTGTGTTCTGGTCTGTGTGCTGTTCTGGTCTGTGTGCTTATCGGTTATGTTTTCAAACATATTCAGTTTTCACCCTGTACTGAAACAAACCAAAAAGGCTAATGCCTAAGAATTTGAGTAAACAAATTCCAAAAGGCAAATAAGACAATCAATATGTAAAGAATCCTCTCATCATAGCAGTAATTAGTTCCCAACTTAAAAGATATCAACTCTGTAAAAGAATCTCACACAATTAAGCATTCATTAGTAGATCTTTCCTACTAACAAATAAATATTGGTGATCTTGGACATCTCATAAGCTTCATCAGATCAATTAACTTGCATATTATTGCTTCTGACTTTCATGTTAGAAATTATAGACAGTCTTTTAATATCCAATTGCAAAGGTTATGTAAATTGCACGGGATCTTTTCTCATGAATGACTGTTCATATTTTTTGATTAGCTTTATCTTTTGGTTCCTGGCTTTGAATTTCTTAGTATCATTCTATAATTCTTCTTTTCTTTCACAGAAATCTGAAGCTTCCCTCTAAACGTCCTTCTATTGTATGTGAAAATTGTCTTTATTCACTGGAGAAAGATAGGCGAGTGAGAGCATTTCATATAATGGACCCAAAAGGAGTACTGGAAATGCTTCTTGTTTTCCTTGAAGAAAGAGGGAACGGAGAGGCCATTCCTCCCTCCTTTGACGATTTCAAGGTAATTTTGACTTGAAAGGGGAAGGGTTGCCCTTCTATTCTTCGTTTGGACTACCTAAACATAGTTTGATTCAACATGTTAGTTACCAGAACCAAATGATTGTTCTTATGCATTCCATGGTCATCTTGTAGGAGGATACTGAAAGAATTCTGCCTCATCTTGGAACTTGGAAAGGTCATTCGCGAACAACACGTACTGGTGTTTATGGAGCAACAATTACTGAAGCAAGTACAACTGCTGTTCTTGAAATCAACAAGGACGGCCAGCTAATTCAGGTTTGTTAGCTCCTTGCAATCAGTTCCTTGTATCAGATAGTTTAGTAATGGTGAACTACTAGTATCCACGAAAGGGGTCATCTGCCCAGTGACACTTGGATAGTAAATGGAATCTCTCTTTCATGCAACTTCTTTGAGAAATGAATTTGAAATAGTTCAATGTTATGATGAATTAGCCGTCTGGATGGATCCTCAGCTATATAGGAAACACAAATGCATTGGTAGAATGGAGTTGTCACCACAAAATTAGCTCAAATATGGGAGGGTGGGGAAAGTTGTGATCTTCTCATTTTTCTTTCTTTCTTTATTTATTTCAGGCACTGAAATGAATATATTTGGTTTCAGCTTTTGGTTGCTAATATATTTCCTTCTTAAATCAAGGATATCACGTCTACTTCTGGTGCGACTAATATTACAACAAATGTACATTGGACCGGTACCATATCCAATAACCTAGTGACATTCGACGGTGGTTTCCAGCTTACTCTGTTGCCTGGGGGCATTTACATGGGATACCCATCTGATGTGGCCAAGAATGTGCAAGAATCCACAGCATTTCACGTTGAGTTTTGTTGGCTAGAATCGCCTGGCAAGAGACAAAGACTTATCCGTACTTACGATGTAGAGGGCTTTGCTGTTTCATCTACTTATTTCATCGAGTCCAAGGTCTGAGTTATTTCCCCTGATTCAAAAAGATGTGCTTCAGACATCATATTTGCTCCCGCATGAACCATTTTTCCTGGGTACAATCACCAACACTGTAGTATCAATTGTATCTATCTATCTATATATCTGTTTTTATATATAG</genome_strand>
        <mrna_strand>CGGGGTACTAACAGGAAGAAGCGTCCCAATTCCATCCGCCATGGCAACGGCGCCAGCCATTTTTGTGCCTTCCACTTCTCTCGCTTCCTCCAATGCACGCAAGATTAATCTAAGTTCATGGAACGAGAAACTGGTTATACCCCAAAATTTTCCATTCTGGACTCCCAAGTACCAGTCTAGGAAACCACCGTCATGCTCCGGTACCAATGTCACGGTGGTCCAAGGTGATCGGAATACAACCGAACTACCAATGAGTATTGACGCTCTTGACAGTTTCATTCGCCTTAATTTGGGAAACTGGACCGGCTCTTTCCAT..............................................................................................................................................................................................CAATTTGATGGTCATGGAAATTTGATGCATAGAATTACAACGAAACTTGCTGTGGGCTCTTATGGTGAAGGTGAACTGATGAGTTTATTACAAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTATACATCAAACAACCTCCATCTACCACTTCATGTTCTGGCGATGATTGTGAGTCAGAGTGGTTTGAGTACAAAATCAAAGAGACCAACATGTTTACCGTCGACAAATATCAACAG...................................................................................................................................ATTGGCTTCTTCCCCAAGGAAAAGGCATACGCACTAAGATATCAGACTGCTGGCATGTTGGAGACTGTGTTAAGACAGGGAGTGCTAGGTGAAGATGATATCGGAGAAGAATCACCAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATCTGAAGCTTCCCTCTAAACGTCCTTCTATTGTATGTGAAAATTGTCTTTATTCACTGGAGAAAGATAGGCGAGTGAGAGCATTTCATATAATGGACCCAAAAGGAGTACTGGAAATGCTTCTTGTTTTCCTTGAAGAAAGAGGGAACGGAGAGGCCATTCCTCCCTCCTTTGACGATTTCAAG...................................................................................................................................GAGGATACTGAAAGAATTCTGCCTCATCTTGGAACTTGGAAAGGTCATTCGCGAACAACACGTACTGGTGTTTATGGAGCAACAATTACTGAAGCAAGTACAACTGCTGTTCTTGAAATCAACAAGGACGGCCAGCTAATTCAG.............................................................................................................................................................................................................................................................................................................................................................................................GATATCACGTCTACTTCTGGTGCGACTAATATTACAACAAATGTACATTGGACCGGTACCATATCCAATAACCTAGTGACATTCGACGGTGGTTTCCAGCTTACTCTGTTGCCTGGGGGCATTTACATGGGATACCCATCTGATGTGGCCAAGAATGTGCAAGAATCCACAGCATTTCACGTTGAGTTTTGTTGGCTAGAATCGCCTGGCAAGAGACAAAGACTTATCCGTACTTACGATGTAGAGGGCTTTGCTGTTTCATCTACTTATTTCATCGAGTCCAAGGTCTGAGTTATTTCCCCTGATTCAAAAAGATGTGCTTCAGACATCATATTTGCTCCCGCATGAACCATTTTTCCTGGGTACAATCACCAACACTGTAGTATCAATTGTATCTATCTATCTATATATCTGTTTTTATATATAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U582166" ref_strand="+" ref_description="SGN-U582166 Tomato 200607#2 [3 ESTs aligned] (*GB) gi|157345734|emb|CAO15032.1| (e_value=1e-23) unnamed; (*ATH) AT3G29185.1 (e_value=6e-21) | Symbol: None | similar to WRKY11 [Oryza sativa (japonica cultivar-group)] (GB:AAQ20911.1) | chr3:11156166-11158463 REVERSE | Aliases: MXO21.1; ">
      <seq>tcactagtgggaaccccgggctgcaggaatttcgcacgagcccaattccatccgccatggcaacggcgccagccatttttgtgccttccacttctctcgcttcctccaatgcacgcaagattaatctaagttcatggaacgagaaactggttataccccaaaattttccattctggactcccaagtaccagtctaggaaaccaccgtcatgctccggtaccaatgtcacggtggtccaaggtgatcggaatacaaccgaactaccaatgagtattgacgctcttgacagtttcattcgccttaatttgggaaactggaccggctctttccatgtcaggatcaactccgttcctctttctctctttctgtggatgcattgtcttatttttgtctataactttattattgataaatacacgtatatttatgaatttttgataaatattcatatcctataatttttagtttgaggtggaaacgtgcatggatttgattccttcatctgcttgatttattttgcagcaatttgatggtcatggaaatttgatgcatagaattacaacgaaacttgctgtgggctcttatggtgaaggtgaactgatgagtttattacaaacgttatacatcaaacaacccccatctaccacttcatgttctggcgatgattgtgagtcagagtggtttgagtacaaaatcaaagagaccaacatgtttaccgtcgacaatatcaacagtttctgtttcttttcagattttattgcatttgaggtaccactaaaagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="+" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="59127" stop="61283"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59423" g_stop="60009" g_length="587"/>
          <reference_exon_boundary r_type="cDNA" r_start="32" r_stop="617" r_length="586" r_score="0.988"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="60010" i_stop="60743" i_length="734">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="60744" g_stop="60861" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="618" r_stop="734" r_length="117" r_score="0.983"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="60862" i_stop="60935" i_length="74">
            <donor d_prob="0.994" d_score="0.98"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="60936" g_stop="60983" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="735" r_stop="782" r_length="48" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="+" ref_id="SGN-U582166" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>753</cumulative_length_of_scored_exons>
        <coverage percentage="0.963" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U582166" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59423" e_stop="60009"/>
          <exon e_start="60744" e_stop="60861"/>
          <exon e_start="60936" e_stop="60983"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGAAGCGTCCCAATTCCATCCGCCATGGCAACGGCGCCAGCCATTTTTGTGCCTTCCACTTCTCTCGCTTCCTCCAATGCACGCAAGATTAATCTAAGTTCATGGAACGAGAAACTGGTTATACCCCAAAATTTTCCATTCTGGACTCCCAAGTACCAGTCTAGGAAACCACCGTCATGCTCCGGTACCAATGTCACGGTGGTCCAAGGTGATCGGAATACAACCGAACTACCAATGAGTATTGACGCTCTTGACAGTTTCATTCGCCTTAATTTGGGAAACTGGACCGGCTCTTTCCATGTCAGGATCAACTCCGTTCCTCTTTCTCTCTTTCTGTGGATGCATTGTCTTATTTTTGTCTATAACTTTATTATTGATAAATACACGTATATTTATGAATTTTTGATAAATATTCATATCCTATAATTTTTAGTTTGAGGTGGAAACGTGCATGGATTTGATTCCTTCATCTGCTTGATTTATTTTGCAGCAATTTGATGGTCATGGAAATTTGATGCATAGAATTACAACGAAACTTGCTGTGGGCTCTTATGGTGAAGGTGAACTGATGAGTTTATTACAAACGTGAGCTCCTATAGTTAGATTCTTCCCTGTATTAATAATGTGTCTTAACCTTGCTATGTTTCCGATGAAAAGTAAGTTAAATAGATTAACTGTCCTTAACAATTTTGTAGCTTCTTCGGTGACTAATATGTGTAAAGTATATATGTTAGTTTATACATTCTAACTTTGAGAATGATCCAATCTAATTCTTTTTGTAATTGTGAAATTGCTAGTACTTATGTAATTAGTAATTTAATAAAATTAAAGGTAGTTGTTAGTTATCCGAAGTTAAAAAACTCTTTTGAGATTTAGGAAAAGTTAAATTAGAATTGAGGAGAAAACCATGGAAATTTCAATGTTTACACTTCATTTTACATGGTTATAGTTTAATGGTATGTAGGTGAACTTTAGGGAATACTTGGAAATCCAGGTGATCTCTTTTTCTTGTTTGTGAATTTTGAGAAATTTTCCATTTAGTGGCATGCTATATTTAAGTGCAAGTAGATTTTGTCAGCCCAAAGCTCAAATTCTTCCACTGTTTTAAATAAAGTTGAGTTTGGAGAATTTATTAAGGAGGCCAATGTCACACATGCATTTCTGATTCATAAGCCCCTTTAGTTTGCTTTTTTATCTGCATAGAATTAGTTAGCAGTGGACACCAATGTATAGGGTATTTTCATTAAATTTGGGTACTGTTATATGTGTTCACTTTATGGTCTGGGAAACAAGTCGACTAACCGGCTTCAAAATTGTAGGTTATACATCAAACAACCTCCATCTACCACTTCATGTTCTGGCGATGATTGTGAGTCAGAGTGGTTTGAGTACAAAATCAAAGAGACCAACATGTTTACCGTCGACAAATATCAACAGGTGAGCTTCACTAAGACAGAGAACTAACTTATATCCCTTCGCTGGTCATACTTAATAAAGACTGTTATCTGCAGTTTCTGTTTCTTTTCAGATTTTATTGCATTTGAGGTACCACTAAAAGT</genome_strand>
        <mrna_strand>TCGCACGAG-CCCAATTCCATCCGCCATGGCAACGGCGCCAGCCATTTTTGTGCCTTCCACTTCTCTCGCTTCCTCCAATGCACGCAAGATTAATCTAAGTTCATGGAACGAGAAACTGGTTATACCCCAAAATTTTCCATTCTGGACTCCCAAGTACCAGTCTAGGAAACCACCGTCATGCTCCGGTACCAATGTCACGGTGGTCCAAGGTGATCGGAATACAACCGAACTACCAATGAGTATTGACGCTCTTGACAGTTTCATTCGCCTTAATTTGGGAAACTGGACCGGCTCTTTCCATGTCAGGATCAACTCCGTTCCTCTTTCTCTCTTTCTGTGGATGCATTGTCTTATTTTTGTCTATAACTTTATTATTGATAAATACACGTATATTTATGAATTTTTGATAAATATTCATATCCTATAATTTTTAGTTTGAGGTGGAAACGTGCATGGATTTGATTCCTTCATCTGCTTGATTTATTTTGCAGCAATTTGATGGTCATGGAAATTTGATGCATAGAATTACAACGAAACTTGCTGTGGGCTCTTATGGTGAAGGTGAACTGATGAGTTTATTACAAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTATACATCAAACAACCCCCATCTACCACTTCATGTTCTGGCGATGATTGTGAGTCAGAGTGGTTTGAGTACAAAATCAAAGAGACCAACATGTTTACCGTCGAC-AATATCAACAG..........................................................................TTTCTGTTTCTTTTCAGATTTTATTGCATTTGAGGTACCACTAAAAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U594541" ref_strand="+" ref_description="SGN-U594541 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|87240627|gb|ABD32485.1| (e_value=6e-42) hypothetical; (*ATH) AT3G29185.1 (e_value=5e-37) | Symbol: None | similar to WRKY11 [Oryza sativa (japonica cultivar-group)] (GB:AAQ20911.1) | chr3:11156166-11158463 REVERSE | Aliases: MXO21.1; ">
      <seq>gcccaattccatccgccatggcaacggcgccagccatttttgtgccttccacttctctcgcttcctccaatgcacgcaagattaatctaagttcatggaacgagaaactggttataccccaaaattttccattctggactcccaagtaccagtctaggaaaccaccgtcatgctccggtaccaatgtcacggtggtccaaggtgatcggaatacaaccgaactaccaatgagtattgacgctcttgacagtttcattcgccttaatttgggaaactggaccggctctttccatcaatttgatggtcatggaaatttgatgcatagaattacaacgaaacttgctgtgggctcttatggtgaaggtgaactgatgagtttattacaaacgttatacatcaaacaacctccatctaccacttcatgttctggcgatgattgtgagtcagagtggtttgagtacaaaatcaaagagaccaacatgtttaccgtcgacaaatatcaacagattttattgcatttgaggtaccactaaaagtagtttgcagattggcttcttccccaaggaaaaggcatacgcactaagatatcagactgctggcatgttggagactgtgttaagacagggagtgctaggtgaagatgatatcggagaaaatcaccaagaaatctgaagcttccctctaacgtccttctattgtatgtgaaaattgtctttattcactggagaaagataggcgagtgagacatttcatataatggacccaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="+" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="59133" stop="62195"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59432" g_stop="59724" g_length="293"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="293" r_length="293" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="59725" i_stop="59914" i_length="190">
            <donor d_prob="0.196" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="59915" g_stop="60009" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="294" r_stop="388" r_length="95" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="60010" i_stop="60743" i_length="734">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="60744" g_stop="60861" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="389" r_stop="506" r_length="118" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="60862" i_stop="60952" i_length="91">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.599" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="60953" g_stop="61111" g_length="159"/>
          <reference_exon_boundary r_type="cDNA" r_start="507" r_stop="664" r_length="158" r_score="0.994"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="61112" i_stop="61789" i_length="678">
            <donor d_prob="0.997" d_score="0.98"/>
            <acceptor a_prob="0.762" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="61790" g_stop="61895" g_length="106"/>
          <reference_exon_boundary r_type="cDNA" r_start="665" r_stop="768" r_length="104" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="+" ref_id="SGN-U594541" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>771</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U594541" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59432" e_stop="59724"/>
          <exon e_start="59915" e_stop="60009"/>
          <exon e_start="60744" e_stop="60861"/>
          <exon e_start="60953" e_stop="61111"/>
          <exon e_start="61790" e_stop="61895"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCCAATTCCATCCGCCATGGCAACGGCGCCAGCCATTTTTGTGCCTTCCACTTCTCTCGCTTCCTCCAATGCACGCAAGATTAATCTAAGTTCATGGAACGAGAAACTGGTTATACCCCAAAATTTTCCATTCTGGACTCCCAAGTACCAGTCTAGGAAACCACCGTCATGCTCCGGTACCAATGTCACGGTGGTCCAAGGTGATCGGAATACAACCGAACTACCAATGAGTATTGACGCTCTTGACAGTTTCATTCGCCTTAATTTGGGAAACTGGACCGGCTCTTTCCATGTCAGGATCAACTCCGTTCCTCTTTCTCTCTTTCTGTGGATGCATTGTCTTATTTTTGTCTATAACTTTATTATTGATAAATACACGTATATTTATGAATTTTTGATAAATATTCATATCCTATAATTTTTAGTTTGAGGTGGAAACGTGCATGGATTTGATTCCTTCATCTGCTTGATTTATTTTGCAGCAATTTGATGGTCATGGAAATTTGATGCATAGAATTACAACGAAACTTGCTGTGGGCTCTTATGGTGAAGGTGAACTGATGAGTTTATTACAAACGTGAGCTCCTATAGTTAGATTCTTCCCTGTATTAATAATGTGTCTTAACCTTGCTATGTTTCCGATGAAAAGTAAGTTAAATAGATTAACTGTCCTTAACAATTTTGTAGCTTCTTCGGTGACTAATATGTGTAAAGTATATATGTTAGTTTATACATTCTAACTTTGAGAATGATCCAATCTAATTCTTTTTGTAATTGTGAAATTGCTAGTACTTATGTAATTAGTAATTTAATAAAATTAAAGGTAGTTGTTAGTTATCCGAAGTTAAAAAACTCTTTTGAGATTTAGGAAAAGTTAAATTAGAATTGAGGAGAAAACCATGGAAATTTCAATGTTTACACTTCATTTTACATGGTTATAGTTTAATGGTATGTAGGTGAACTTTAGGGAATACTTGGAAATCCAGGTGATCTCTTTTTCTTGTTTGTGAATTTTGAGAAATTTTCCATTTAGTGGCATGCTATATTTAAGTGCAAGTAGATTTTGTCAGCCCAAAGCTCAAATTCTTCCACTGTTTTAAATAAAGTTGAGTTTGGAGAATTTATTAAGGAGGCCAATGTCACACATGCATTTCTGATTCATAAGCCCCTTTAGTTTGCTTTTTTATCTGCATAGAATTAGTTAGCAGTGGACACCAATGTATAGGGTATTTTCATTAAATTTGGGTACTGTTATATGTGTTCACTTTATGGTCTGGGAAACAAGTCGACTAACCGGCTTCAAAATTGTAGGTTATACATCAAACAACCTCCATCTACCACTTCATGTTCTGGCGATGATTGTGAGTCAGAGTGGTTTGAGTACAAAATCAAAGAGACCAACATGTTTACCGTCGACAAATATCAACAGGTGAGCTTCACTAAGACAGAGAACTAACTTATATCCCTTCGCTGGTCATACTTAATAAAGACTGTTATCTGCAGTTTCTGTTTCTTTTCAGATTTTATTGCATTTGAGGTACCACTAAAAGTAGTTTGCAGATTGGCTTCTTCCCCAAGGAAAAGGCATACGCACTAAGATATCAGACTGCTGGCATGTTGGAGACTGTGTTAAGACAGGGAGTGCTAGGTGAAGATGATATCGGAGAAGAATCACCAAGGTAAATGTTTCTTACGTGGAGATGAATCAGTCAAAATAAGTTAAAATATTAGATCTGATGAGATCAAAGGTTGAAATTATGCATATGTTTTGCTGCTAGCTTTATTTTGGAAATGCTACCCAGTATGACCTTAATGTTGCTGTTTGTCACTTTTCCCCTTGGCTCTGCTGTGTTCTGGTCTGTGTGCTGTTCTGGTCTGTGTGCTTATCGGTTATGTTTTCAAACATATTCAGTTTTCACCCTGTACTGAAACAAACCAAAAAGGCTAATGCCTAAGAATTTGAGTAAACAAATTCCAAAAGGCAAATAAGACAATCAATATGTAAAGAATCCTCTCATCATAGCAGTAATTAGTTCCCAACTTAAAAGATATCAACTCTGTAAAAGAATCTCACACAATTAAGCATTCATTAGTAGATCTTTCCTACTAACAAATAAATATTGGTGATCTTGGACATCTCATAAGCTTCATCAGATCAATTAACTTGCATATTATTGCTTCTGACTTTCATGTTAGAAATTATAGACAGTCTTTTAATATCCAATTGCAAAGGTTATGTAAATTGCACGGGATCTTTTCTCATGAATGACTGTTCATATTTTTTGATTAGCTTTATCTTTTGGTTCCTGGCTTTGAATTTCTTAGTATCATTCTATAATTCTTCTTTTCTTTCACAGAAATCTGAAGCTTCCCTCTAAACGTCCTTCTATTGTATGTGAAAATTGTCTTTATTCACTGGAGAAAGATAGGCGAGTGAGAGCATTTCATATAATGGACCCAAAA</genome_strand>
        <mrna_strand>GCCCAATTCCATCCGCCATGGCAACGGCGCCAGCCATTTTTGTGCCTTCCACTTCTCTCGCTTCCTCCAATGCACGCAAGATTAATCTAAGTTCATGGAACGAGAAACTGGTTATACCCCAAAATTTTCCATTCTGGACTCCCAAGTACCAGTCTAGGAAACCACCGTCATGCTCCGGTACCAATGTCACGGTGGTCCAAGGTGATCGGAATACAACCGAACTACCAATGAGTATTGACGCTCTTGACAGTTTCATTCGCCTTAATTTGGGAAACTGGACCGGCTCTTTCCAT..............................................................................................................................................................................................CAATTTGATGGTCATGGAAATTTGATGCATAGAATTACAACGAAACTTGCTGTGGGCTCTTATGGTGAAGGTGAACTGATGAGTTTATTACAAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTATACATCAAACAACCTCCATCTACCACTTCATGTTCTGGCGATGATTGTGAGTCAGAGTGGTTTGAGTACAAAATCAAAGAGACCAACATGTTTACCGTCGACAAATATCAACAG...........................................................................................ATTTTATTGCATTTGAGGTACCACTAAAAGTAGTTTGCAGATTGGCTTCTTCCCCAAGGAAAAGGCATACGCACTAAGATATCAGACTGCTGGCATGTTGGAGACTGTGTTAAGACAGGGAGTGCTAGGTGAAGATGATATCGGAGAA-AATCACCAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATCTGAAGCTTCCCTCT-AACGTCCTTCTATTGTATGTGAAAATTGTCTTTATTCACTGGAGAAAGATAGGCGAGTGAGA-CATTTCATATAATGGACCCAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U582168" ref_strand="+" ref_description="SGN-U582168 Tomato 200607#2 [5 ESTs aligned] (*GB) gi|30689522|ref|NP_850647.1| (e_value=3e-86) expressed protein [Arabidopsis thaliana]; (*ATH) AT3G29185.2 (e_value=2e-88) | Symbol: None | expressed protein | chr3:11156166-11158444 REVERSE | Aliases: None; ">
      <seq>tggcaacggcgccagccatttttgtgccttccacttctctcgcttcctccaatgcacgcaagattaatctaagttcatggaacgagaaactggttataccccaaaattttccattctggactcccaagtaccagtctaggaaaccaccgtcatgctccggtaccaatgtcacggtggtccaaggtgatcggaatacaaccgaactaccaatgagtattgacgctcttgacagtttcattcgccttaatttgggaaactggaccggctctttccatcaatttgatggtcatggaaatttgatgcatagaattacaacgaaacttgctgtgggctcttatggtgaaggtgaactgatgagtttattacaaacgttatacatcaaacaacctccatctaccacttcatgttctggcgatgattgtgagtcagagtggtttgagtacaaaatcaaagagaccaacatgtttaccgtcgacaaatatcaacagtttctgtttcttttcagattttattgcatttgaggtaccactaaaagtagtttgcagattggcttcttccccaaggaaaaggcatacgcactaagatatcagactgctggcatgttggagactgtgttaagacagggagtgctaggtgaagatgatatcggagaagaatcaccaagaaatctgaagcttccctctaaacgtccttctattgtatgtgaaaattgtctttattcactggagaaagataggcgagtgagagcatttcatataatggacccaaaaggagtactggaaatgcttcttgttttccttgaagaaagagggaacggagaggccattcctccctcctttgacgatttcaaggacgatactgaaagaattctgcctcatcttggaacttggaaaggtcattcgcgaacaacacgtactgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="+" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="59150" stop="62475"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59450" g_stop="59724" g_length="275"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="275" r_length="275" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="59725" i_stop="59914" i_length="190">
            <donor d_prob="0.196" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="59915" g_stop="60009" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="276" r_stop="370" r_length="95" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="60010" i_stop="60743" i_length="734">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="60744" g_stop="60861" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="371" r_stop="488" r_length="118" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="60862" i_stop="60935" i_length="74">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="60936" g_stop="61111" g_length="176"/>
          <reference_exon_boundary r_type="cDNA" r_start="489" r_stop="664" r_length="176" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="61112" i_stop="61789" i_length="678">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.762" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="61790" g_stop="61976" g_length="187"/>
          <reference_exon_boundary r_type="cDNA" r_start="665" r_stop="851" r_length="187" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="61977" i_stop="62107" i_length="131">
            <donor d_prob="0.869" d_score="1.00"/>
            <acceptor a_prob="0.974" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="62108" g_stop="62175" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="852" r_stop="919" r_length="68" r_score="0.985"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="+" ref_id="SGN-U582168" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>919</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U582168" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59450" e_stop="59724"/>
          <exon e_start="59915" e_stop="60009"/>
          <exon e_start="60744" e_stop="60861"/>
          <exon e_start="60936" e_stop="61111"/>
          <exon e_start="61790" e_stop="61976"/>
          <exon e_start="62108" e_stop="62175"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGCAACGGCGCCAGCCATTTTTGTGCCTTCCACTTCTCTCGCTTCCTCCAATGCACGCAAGATTAATCTAAGTTCATGGAACGAGAAACTGGTTATACCCCAAAATTTTCCATTCTGGACTCCCAAGTACCAGTCTAGGAAACCACCGTCATGCTCCGGTACCAATGTCACGGTGGTCCAAGGTGATCGGAATACAACCGAACTACCAATGAGTATTGACGCTCTTGACAGTTTCATTCGCCTTAATTTGGGAAACTGGACCGGCTCTTTCCATGTCAGGATCAACTCCGTTCCTCTTTCTCTCTTTCTGTGGATGCATTGTCTTATTTTTGTCTATAACTTTATTATTGATAAATACACGTATATTTATGAATTTTTGATAAATATTCATATCCTATAATTTTTAGTTTGAGGTGGAAACGTGCATGGATTTGATTCCTTCATCTGCTTGATTTATTTTGCAGCAATTTGATGGTCATGGAAATTTGATGCATAGAATTACAACGAAACTTGCTGTGGGCTCTTATGGTGAAGGTGAACTGATGAGTTTATTACAAACGTGAGCTCCTATAGTTAGATTCTTCCCTGTATTAATAATGTGTCTTAACCTTGCTATGTTTCCGATGAAAAGTAAGTTAAATAGATTAACTGTCCTTAACAATTTTGTAGCTTCTTCGGTGACTAATATGTGTAAAGTATATATGTTAGTTTATACATTCTAACTTTGAGAATGATCCAATCTAATTCTTTTTGTAATTGTGAAATTGCTAGTACTTATGTAATTAGTAATTTAATAAAATTAAAGGTAGTTGTTAGTTATCCGAAGTTAAAAAACTCTTTTGAGATTTAGGAAAAGTTAAATTAGAATTGAGGAGAAAACCATGGAAATTTCAATGTTTACACTTCATTTTACATGGTTATAGTTTAATGGTATGTAGGTGAACTTTAGGGAATACTTGGAAATCCAGGTGATCTCTTTTTCTTGTTTGTGAATTTTGAGAAATTTTCCATTTAGTGGCATGCTATATTTAAGTGCAAGTAGATTTTGTCAGCCCAAAGCTCAAATTCTTCCACTGTTTTAAATAAAGTTGAGTTTGGAGAATTTATTAAGGAGGCCAATGTCACACATGCATTTCTGATTCATAAGCCCCTTTAGTTTGCTTTTTTATCTGCATAGAATTAGTTAGCAGTGGACACCAATGTATAGGGTATTTTCATTAAATTTGGGTACTGTTATATGTGTTCACTTTATGGTCTGGGAAACAAGTCGACTAACCGGCTTCAAAATTGTAGGTTATACATCAAACAACCTCCATCTACCACTTCATGTTCTGGCGATGATTGTGAGTCAGAGTGGTTTGAGTACAAAATCAAAGAGACCAACATGTTTACCGTCGACAAATATCAACAGGTGAGCTTCACTAAGACAGAGAACTAACTTATATCCCTTCGCTGGTCATACTTAATAAAGACTGTTATCTGCAGTTTCTGTTTCTTTTCAGATTTTATTGCATTTGAGGTACCACTAAAAGTAGTTTGCAGATTGGCTTCTTCCCCAAGGAAAAGGCATACGCACTAAGATATCAGACTGCTGGCATGTTGGAGACTGTGTTAAGACAGGGAGTGCTAGGTGAAGATGATATCGGAGAAGAATCACCAAGGTAAATGTTTCTTACGTGGAGATGAATCAGTCAAAATAAGTTAAAATATTAGATCTGATGAGATCAAAGGTTGAAATTATGCATATGTTTTGCTGCTAGCTTTATTTTGGAAATGCTACCCAGTATGACCTTAATGTTGCTGTTTGTCACTTTTCCCCTTGGCTCTGCTGTGTTCTGGTCTGTGTGCTGTTCTGGTCTGTGTGCTTATCGGTTATGTTTTCAAACATATTCAGTTTTCACCCTGTACTGAAACAAACCAAAAAGGCTAATGCCTAAGAATTTGAGTAAACAAATTCCAAAAGGCAAATAAGACAATCAATATGTAAAGAATCCTCTCATCATAGCAGTAATTAGTTCCCAACTTAAAAGATATCAACTCTGTAAAAGAATCTCACACAATTAAGCATTCATTAGTAGATCTTTCCTACTAACAAATAAATATTGGTGATCTTGGACATCTCATAAGCTTCATCAGATCAATTAACTTGCATATTATTGCTTCTGACTTTCATGTTAGAAATTATAGACAGTCTTTTAATATCCAATTGCAAAGGTTATGTAAATTGCACGGGATCTTTTCTCATGAATGACTGTTCATATTTTTTGATTAGCTTTATCTTTTGGTTCCTGGCTTTGAATTTCTTAGTATCATTCTATAATTCTTCTTTTCTTTCACAGAAATCTGAAGCTTCCCTCTAAACGTCCTTCTATTGTATGTGAAAATTGTCTTTATTCACTGGAGAAAGATAGGCGAGTGAGAGCATTTCATATAATGGACCCAAAAGGAGTACTGGAAATGCTTCTTGTTTTCCTTGAAGAAAGAGGGAACGGAGAGGCCATTCCTCCCTCCTTTGACGATTTCAAGGTAATTTTGACTTGAAAGGGGAAGGGTTGCCCTTCTATTCTTCGTTTGGACTACCTAAACATAGTTTGATTCAACATGTTAGTTACCAGAACCAAATGATTGTTCTTATGCATTCCATGGTCATCTTGTAGGAGGATACTGAAAGAATTCTGCCTCATCTTGGAACTTGGAAAGGTCATTCGCGAACAACACGTACTGG</genome_strand>
        <mrna_strand>TGGCAACGGCGCCAGCCATTTTTGTGCCTTCCACTTCTCTCGCTTCCTCCAATGCACGCAAGATTAATCTAAGTTCATGGAACGAGAAACTGGTTATACCCCAAAATTTTCCATTCTGGACTCCCAAGTACCAGTCTAGGAAACCACCGTCATGCTCCGGTACCAATGTCACGGTGGTCCAAGGTGATCGGAATACAACCGAACTACCAATGAGTATTGACGCTCTTGACAGTTTCATTCGCCTTAATTTGGGAAACTGGACCGGCTCTTTCCAT..............................................................................................................................................................................................CAATTTGATGGTCATGGAAATTTGATGCATAGAATTACAACGAAACTTGCTGTGGGCTCTTATGGTGAAGGTGAACTGATGAGTTTATTACAAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTATACATCAAACAACCTCCATCTACCACTTCATGTTCTGGCGATGATTGTGAGTCAGAGTGGTTTGAGTACAAAATCAAAGAGACCAACATGTTTACCGTCGACAAATATCAACAG..........................................................................TTTCTGTTTCTTTTCAGATTTTATTGCATTTGAGGTACCACTAAAAGTAGTTTGCAGATTGGCTTCTTCCCCAAGGAAAAGGCATACGCACTAAGATATCAGACTGCTGGCATGTTGGAGACTGTGTTAAGACAGGGAGTGCTAGGTGAAGATGATATCGGAGAAGAATCACCAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATCTGAAGCTTCCCTCTAAACGTCCTTCTATTGTATGTGAAAATTGTCTTTATTCACTGGAGAAAGATAGGCGAGTGAGAGCATTTCATATAATGGACCCAAAAGGAGTACTGGAAATGCTTCTTGTTTTCCTTGAAGAAAGAGGGAACGGAGAGGCCATTCCTCCCTCCTTTGACGATTTCAAG...................................................................................................................................GACGATACTGAAAGAATTCTGCCTCATCTTGGAACTTGGAAAGGTCATTCGCGAACAACACGTACTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U570041" ref_strand="+" ref_description="SGN-U570041 Tomato 200607#2 [28 ESTs aligned] (*GB) gi|58201894|gb|AAW67002.1| (e_value=9e-158) WRKY transcription factor-c [Capsicum annuum]; (*ATH) AT2G03340.1 (e_value=1e-86) | Symbol: None | WRKY family transcription factor, contains Pfam profile: PF03106 WRKY DNA -binding domain | chr2:1014347-1017012 REVERSE | Aliases: T4M8.23, T4M8_23; (*SWP) sp|Q9ZQ70|WRKY3_ARATH (e_value=1e-85) Probable WRKY transcription factor 3 OS=Arabidopsis thaliana GN=WRKY3; ">
      <seq>agaaaaagcaactccactttcttctttatctcttgagaagaagaagaagaaaactgaaaatgggggaaacaggggaagcttcagcaatatcgtttccatctttgacaattccacctcgcccttcatttgaatccttttttaacatgtcttctttcagcccaggtccaatgtctcttgtttccagtttcttgtctgatcagagccctgattctgcagattgtcctccttctttctcccagcttctcgccggatatgaatattctggagatcctcctgggtgtcaaaagaactctgggtataaccaaaatgggtctgtgaatcctcaattgttcgttattccctctggtttgagtccttctggattccttaattctcctggctttctttccccacttcagagtccctttggaatgtcacatcagcaggctctagcacatgttacagcacaggctgaattttctagttcatatatgcaaatgcaaatgcaaatgcaagcccaagaccagtgttcctctcaggtggctccagtagaagcattaggacatgagttgtcgattgatccaaaggagtcttccttgcagataaaggaatgtctgcaatctagtttggataacaagccatcagacaatcagggtaagcaatttgaacagccggaggtttctcaatctgagaacaagacatcctctggtgctctcgataagccagcttgtgatggttataactggagaaaatatggtcagaaaaaggttaaagctagtgaatgccctaggagctactataagtgcacatatctcaaatgtctagtgaagaagaaggttgagcggtctgttgatggtcacataactgagatcacatataatggccgtcacaaccatgatcaaccaaccaaacgaagaaaaaatggttctgctttggataatacagactgctttggagttcgaccagatattagtacacatgattggacagtaatgaatagctcggatgggtcttctccttctcgatctgaccaggttccaacccaaatggtatctgaacttcttgtgaaaagagaatgtgatgaaaccgaaagctatttgatagacgtagatgatgaagggcatgatgaaccagatgcaaagagaacgaagacggcaattgagactgtagcttcatcacatgtcacagtagctgaatccaagattgttctgcagacgagaagtgaagttgatttcttagatgatggatataaatggcgaaaatatgggcagaaggtggtaaaggggactcagcatccaaggagttactatcggtgcacatatcctggatgcaatgtccgcaaacaagtcgagagggcttcaactgatccaaaagctgtcataacaacatatgaaggcaagcataatcatgatattcctactgttagtgttaggaatagaggaacaaggaataaatacagctaaagatagcgttgagaacgtaagaaacagtgtgaaggccttcagttcacaaaaatatcttggtttctgaaaacaacaacaaaattccctcgtgtgaaaactgaaagattgcagcattagtagcatcaggaaaagtagaagggtgaaaagatgtggtttgagcttcttacttctgtacaaaaagcttattatattatctattccatgttgaaaaccacatgcttggtcccttgaatttgttggttggtctcaagaaatatttgtaaattttattgctaatttgtaagatgtctaataaaaaaaaaaaggtgtatagtttgtcattgtagcttcatgggccaggctttaaactctagtcaggaagaataaaggagcttattcaagcaaagttgtcaacttttgatacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="+" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="65419" stop="68883"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="65719" g_stop="66116" g_length="398"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="398" r_length="398" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="66117" i_stop="66468" i_length="352">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="66469" g_stop="67196" g_length="728"/>
          <reference_exon_boundary r_type="cDNA" r_start="399" r_stop="1126" r_length="728" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="67197" i_stop="67307" i_length="111">
            <donor d_prob="0.970" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="67308" g_stop="67460" g_length="153"/>
          <reference_exon_boundary r_type="cDNA" r_start="1127" r_stop="1279" r_length="153" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="67461" i_stop="68016" i_length="556">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.977" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="68017" g_stop="68583" g_length="567"/>
          <reference_exon_boundary r_type="cDNA" r_start="1280" r_stop="1846" r_length="567" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="+" ref_id="SGN-U570041" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>1846</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U570041" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="65719" e_stop="66116"/>
          <exon e_start="66469" e_stop="67196"/>
          <exon e_start="67308" e_stop="67460"/>
          <exon e_start="68017" e_stop="68583"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAAAAGCAACTCCACTTTCTTCTTTATCTCTTGAGAAGAAGAAGAAGAAAACTGAAAATGGGGGAAACAGGGGAAGCTTCAGCAATATCGTTTCCATCTTTGACAATTCCACCTCGCCCTTCATTTGAATCCTTTTTTAACATGTCTTCTTTCAGCCCAGGTCCAATGTCTCTTGTTTCCAGTTTCTTGTCTGATCAGAGCCCTGATTCTGCAGATTGTCCTCCTTCTTTCTCCCAGCTTCTCGCCGGATATGAATATTCTGGAGATCCTCCTGGGTGTCAAAAGAACTCTGGGTATAACCAAAATGGGTCTGTGAATCCTCAATTGTTCGTTATTCCCTCTGGTTTGAGTCCTTCTGGATTCCTTAATTCTCCTGGCTTTCTTTCCCCACTTCAGGTAAAAATATAATCTGCTCAAATTCTTCATCTATCTTGTAATAATATATCAATAATAGCCAAAAACTTGTTTTTTTTTATTTTATGTTTTGATTTAGTAATTTATCTACTTTGGTAAGTTTATTCTATAAACATGTTTTTGATAAGGATCCAGTATTCTAGTAATGAGTTCGCTCAAACTTTATATGTTTTAAATTTCATCAAGTTGGGTGAATGCAGACCTTATCCCTACCTTTGTGCGTTAGAGGTAGAGAGACTGTTTCTAAGTTGGTTATAGAAATAGTTAATCTGAAAGTCATCAAAATTACTTTTGGCATCATGTGGTTACTTATGGTATTTCAATTTGATTGTAGAGTCCCTTTGGAATGTCACATCAGCAGGCTCTAGCACATGTTACAGCACAGGCTGAATTTTCTAGTTCATATATGCAAATGCAAATGCAAATGCAAGCCCAAGACCAGTGTTCCTCTCAGGTGGCTCCAGTAGAAGCATTAGGACATGAGTTGTCGATTGATCCAAAGGAGTCTTCCTTGCAGATAAAGGAATGTCTGCAATCTAGTTTGGATAACAAGCCATCAGACAATCAGGGTAAGCAATTTGAACAGCCGGAGGTTTCTCAATCTGAGAACAAGACATCCTCTGGTGCTCTCGATAAGCCAGCTTGTGATGGTTATAACTGGAGAAAATATGGTCAGAAAAAGGTTAAAGCTAGTGAATGCCCTAGGAGCTACTATAAGTGCACATATCTCAAATGTCTAGTGAAGAAGAAGGTTGAGCGGTCTGTTGATGGTCACATAACTGAGATCACATATAATGGCCGTCACAACCATGATCAACCAACCAAACGAAGAAAAAATGGTTCTGCTTTGGATAATACAGACTGCTTTGGAGTTCGACCAGATATTAGTACACATGATTGGACAGTAATGAATAGCTCGGATGGGTCTTCTCCTTCTCGATCTGACCAGGTTCCAACCCAAATGGTATCTGAACTTCTTGTGAAAAGAGAATGTGATGAAACCGAAAGCTATTTGATAGACGTAGATGATGAAGGGCATGATGAACCAGATGCAAAGAGAACGTGAGTCCTCCTTTCATGACTAAAAGAATGCGCCATCCTTCTTTAGTAAAACAAGAAGAAAATATTGTAGAGCAACAAAAGTATGTATCTAATTCAATTACTATGTCACAGGAAGACGGCAATTGAGACTGTAGCTTCATCACATGTCACAGTAGCTGAATCCAAGATTGTTCTGCAGACGAGAAGTGAAGTTGATTTCTTAGATGATGGATATAAATGGCGAAAATATGGGCAGAAGGTGGTAAAGGGGACTCAGCATCCAAGGTATCTTCTGAGTTCTGACTGCACAATTTTTTTCAATTTAATGTTAGTTGCTGTTCTGTAAGAGTCTTGTTTTATGTAGAGTTTATTATCGTGAACTCTTCAGGAAATGATGCTACTTATCTCCTTGAACTTCTTAAATATACCAAAACAATAGCTCAAATTTCTTGTGCATCTTGATTTTACAATAGTCTGAAATGGATACAGTGTGAAGTCCCATACAAGAGGAAACTTGCACAATGTAGTTAAGAATGTCACTAGAGGTTTATTCAACAGTGATAACATTTCTTACGAAATAGGAAGAACTGGATGTATGAATTTTTATGCGAAAGCATGTGCCAGAATTTAAAGATCTTTATATGTGCATATGATTAGTCATTAGAACAAACAAGTGCAGTAAGATACTCTGGAGATTAAAATCAAGTGCTATAATCAGCTGCAGCGTCTTGTTTGAGCAATACTAGTTCTTTGTCCTTCCAGAATATGTTTATCACATGTGTCCTGTTCTTTTGCTATATGGCATCAATAATCCGCTTGTGCATCCACACTTGATATACAGGAGTTACTATCGGTGCACATATCCTGGATGCAATGTCCGCAAACAAGTCGAGAGGGCTTCAACTGATCCAAAAGCTGTCATAACAACATATGAAGGCAAGCATAATCATGATATTCCTACTGTTAGTGTTAGGAATAGAGGAACAAGGAATAAATACAGCTAAAGATAGCGTTGAGAACGTAAGAAACAGTGTGAAGGCCTTCAGTTCACAAAAATATCTTGGTTTCTGAAAACAACAACAAAATTCCCTCGTGTGAAAACTGAAAGATTGCAGCATTAGTAGCATCAGGAAAAGTAGAAGGGTGAAAAGATGTGGTTTGAGCTTCTTACTTCTGTACAAAAAGCTTATTATATTATCTATTCCATGTTGAAAACCACATGCTTGGTCCCTTGAATTTGTTGGTTGGTCTCAAGAAATATTTGTAAATTTTATTGCTAATTTGTAAGATGTCTAATAAAAAAAAAAAGGTGTATAGTTTGTCATTGTAGCTTCATGGGCCAGGCTTTAAACTCTAGTCAGGAAGAATAAAGGAGCTTATTCAAGCAAAGTTGTCAACTTTTGATACC</genome_strand>
        <mrna_strand>AGAAAAAGCAACTCCACTTTCTTCTTTATCTCTTGAGAAGAAGAAGAAGAAAACTGAAAATGGGGGAAACAGGGGAAGCTTCAGCAATATCGTTTCCATCTTTGACAATTCCACCTCGCCCTTCATTTGAATCCTTTTTTAACATGTCTTCTTTCAGCCCAGGTCCAATGTCTCTTGTTTCCAGTTTCTTGTCTGATCAGAGCCCTGATTCTGCAGATTGTCCTCCTTCTTTCTCCCAGCTTCTCGCCGGATATGAATATTCTGGAGATCCTCCTGGGTGTCAAAAGAACTCTGGGTATAACCAAAATGGGTCTGTGAATCCTCAATTGTTCGTTATTCCCTCTGGTTTGAGTCCTTCTGGATTCCTTAATTCTCCTGGCTTTCTTTCCCCACTTCAG................................................................................................................................................................................................................................................................................................................................................................AGTCCCTTTGGAATGTCACATCAGCAGGCTCTAGCACATGTTACAGCACAGGCTGAATTTTCTAGTTCATATATGCAAATGCAAATGCAAATGCAAGCCCAAGACCAGTGTTCCTCTCAGGTGGCTCCAGTAGAAGCATTAGGACATGAGTTGTCGATTGATCCAAAGGAGTCTTCCTTGCAGATAAAGGAATGTCTGCAATCTAGTTTGGATAACAAGCCATCAGACAATCAGGGTAAGCAATTTGAACAGCCGGAGGTTTCTCAATCTGAGAACAAGACATCCTCTGGTGCTCTCGATAAGCCAGCTTGTGATGGTTATAACTGGAGAAAATATGGTCAGAAAAAGGTTAAAGCTAGTGAATGCCCTAGGAGCTACTATAAGTGCACATATCTCAAATGTCTAGTGAAGAAGAAGGTTGAGCGGTCTGTTGATGGTCACATAACTGAGATCACATATAATGGCCGTCACAACCATGATCAACCAACCAAACGAAGAAAAAATGGTTCTGCTTTGGATAATACAGACTGCTTTGGAGTTCGACCAGATATTAGTACACATGATTGGACAGTAATGAATAGCTCGGATGGGTCTTCTCCTTCTCGATCTGACCAGGTTCCAACCCAAATGGTATCTGAACTTCTTGTGAAAAGAGAATGTGATGAAACCGAAAGCTATTTGATAGACGTAGATGATGAAGGGCATGATGAACCAGATGCAAAGAGAAC...............................................................................................................GAAGACGGCAATTGAGACTGTAGCTTCATCACATGTCACAGTAGCTGAATCCAAGATTGTTCTGCAGACGAGAAGTGAAGTTGATTTCTTAGATGATGGATATAAATGGCGAAAATATGGGCAGAAGGTGGTAAAGGGGACTCAGCATCCAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTTACTATCGGTGCACATATCCTGGATGCAATGTCCGCAAACAAGTCGAGAGGGCTTCAACTGATCCAAAAGCTGTCATAACAACATATGAAGGCAAGCATAATCATGATATTCCTACTGTTAGTGTTAGGAATAGAGGAACAAGGAATAAATACAGCTAAAGATAGCGTTGAGAACGTAAGAAACAGTGTGAAGGCCTTCAGTTCACAAAAATATCTTGGTTTCTGAAAACAACAACAAAATTCCCTCGTGTGAAAACTGAAAGATTGCAGCATTAGTAGCATCAGGAAAAGTAGAAGGGTGAAAAGATGTGGTTTGAGCTTCTTACTTCTGTACAAAAAGCTTATTATATTATCTATTCCATGTTGAAAACCACATGCTTGGTCCCTTGAATTTGTTGGTTGGTCTCAAGAAATATTTGTAAATTTTATTGCTAATTTGTAAGATGTCTAATAAAAAAAAAAAGGTGTATAGTTTGTCATTGTAGCTTCATGGGCCAGGCTTTAAACTCTAGTCAGGAAGAATAAAGGAGCTTATTCAAGCAAAGTTGTCAACTTTTGATACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U573439" ref_strand="+" ref_description="SGN-U573439 Tomato 200607#2 [7 ESTs aligned] (*GB) gi|157342392|emb|CAO64505.1| (e_value=7e-81) unnamed; (*ATH) AT1G18670.1 (e_value=3e-77)  Symbol: IBS1 | Encodes a cyclin-dependent kinase-like protein with a ser/thr protein kinase domain and an N-terminal myristoylation sequence.  Mutants in this gene are unable to express female sterility in response to beta-aminobutyric acid, as wild... ; (*SWP) sp|Q9ZVM9|Y1461_ARATH (e_value=2e-66) Putative serine/threonine-protein kinase At1g54610 OS=Arabidopsis thaliana GN=At1g54610; ">
      <seq>cgttgcataacacgcaaagaaaagagaaggaatcccatctctctgttcttctccacctcaaactattacctcttttctcagatcaattttatgaaaacaattttttttttgcagatacaatgagctaatttggggagagaccctttttcccgcacccattattttcacctcccttgacccgttgaatcatacgggtcgatctgggtctctcccaactggatcgaattcatttatgggttttggggggtcatgggttgcgtcagctccaagcaggccacgtcccattccccgccccacgattcgtcggtgaatgttgccggtgtcgacaatgtcgatccattattgcatattggatttgcccctttggagaagatcaaagaggagcctgagaaagagggagaggattccgttagacgattttcggggaaattgagagcatccaagaagggaaattctgataagaaggcggctagttttagcatcaaatttggaaggttaactgaaggtgaacatttggccgccggatggcctgtttggctgactgccgttgccggtgaagctattgatggatggatgcctctgaaatcaaacatgttccagaaattagaaaagattggacaaggtacatatagcagtgtttaccgagcacgtgatattggaaatggtaaaatggtcgccctgaagaaggtgcgatttgacaatttccaaccagatagtgtcagatttatggcacgagaaattgcaattctccgcaaacttgaccatccaaacattatgaagctggaagggataatcacttctcggttatcatgtagcatttaccttgttttcgagtatatggaacatgacctatctggattgttatcatgtcctgacatcaaatttagtgattcgcagatcaaatgctacatgcagcagcttctgagcggactagagcactgccattcacgagggataatgcatcgggatattaaagtttccaacattgtggttaacaatgaatgaactctgaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="+" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="69139" stop="73269"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="69435" g_stop="70046" g_length="612"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="612" r_length="612" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="70047" i_stop="72429" i_length="2383">
            <donor d_prob="0.965" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="72430" g_stop="72714" g_length="285"/>
          <reference_exon_boundary r_type="cDNA" r_start="613" r_stop="897" r_length="285" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="72715" i_stop="72851" i_length="137">
            <donor d_prob="0.974" d_score="1.00"/>
            <acceptor a_prob="0.864" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="72852" g_stop="72969" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="898" r_stop="1015" r_length="118" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="+" ref_id="SGN-U573439" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>1015</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U573439" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="69435" e_stop="70046"/>
          <exon e_start="72430" e_stop="72714"/>
          <exon e_start="72852" e_stop="72969"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCCGCATAACACGCAAAGAAAAGAGAAGGAATCCCATCTCTCTGTTCTTCTCCACCTCAAACTATTACCTCTTTTCTCAGATCAATTTTATGAAAACAATTTTTTTTTTGCAGATACAATGAGCTAATTTGGGGAGAGACCCTTTTTCCCGCACCCATTATTTTCACCTCCCTTGACCCGTTGAATCATACGGGTCGATCTGGGTCTCTCCCAACTGGATCGAATTCATTTATGGGTTTTGGGGGGTCATGGGTTGCGTCAGCTCCAAGCAGGCCACGTCCCATTCCCCGCCCCACGATTCGTCGGTGAATGTTGCCGGTGTCGACAATGTCGATCCATTATTGCATATTGGATTTGCCCCTTTGGAGAAGATCAAAGAGGAGCCTGAGAAAGAGGGAGAGGATTCCGTTAGACGATTTTCGGGGAAATTGAGAGCATCCAAGAAGGGAAATTCTGATAAGAAGGCGGCTAGTTTTAGCATCAAATTTGGAAGGTTAACTGAAGGTGAACATTTGGCCGCCGGATGGCCTGTTTGGCTGACTGCCGTTGCCGGTGAAGCTATTGATGGATGGATGCCTCTGAAATCAAACATGTTCCAGAAATTAGAAAAGGTAACCAATGTTTCCCTAAAAAAGATATGATTCCTCGTATTATCTGGACAGATTCTTGATTTTACAAATTTGTATTCATGTGTGTATGCAACATAAAAAGGTTATCCTTTCAATAGCAGTTCCATTACTTTTCTCCCATTCCGTTGCAGAAGGAAAAGACACCATTGCAAACATTTACCCCAAAAAGATGAATATTGTGGTGCTTCATGCCATCATTAACTCCTGCATTCGCCATTTATAGATTAGGTATTACTTCAAGTCATGGTCTCCATTTTACTGTAATCAATCATGTAAGGAAAGCTTACTGACAGAATCTAAGGGAATCTAGTTAAATCATTAAAATCTCGGCTTTAATCATAGTTTGACAATTTTTACACTGGCATCAACCTTCCATTACCTTCCTCTTTAGGATTTGTCTATGTCTTGAAACACATGTAGGCGAGGTTATCCAATATTGGTTGATGCATTTAATACGGAGCAGCTAGATACAGAAGATTTTTATGGTTGATGCAAAACTAATTTGGGAATGACGCATAGTTTATAAATTGAAAATCTTCAGCTTTTCTATCAAGGTTATTTTTGATGAATAAGTGTCTGAGAGAAATCTGCACCACATCATGCTTTCTCATCAGTTCCTACTCAATCATCAGCCTTTCAATTTGAGTAATTGGCTAAAAATTCTGTGCATGTTTTAGCAAGTTTTGTTAGCTGAGACTATAAATTACCATTTCTTTAACCCCTCTCATGGTACCATTTTAATGAACTTGATACTCCCCAAAGGAGGAAACCTTTATTTTTTCTGCTTTTACTTGCCATCCTTATCTTTCAATCTGAACTTGCATGTGATCCACTTGCTACTTCCAATTATGAGGAACTACAAGGTCTATAATAAACTGAAAATACCTTTTAATTTTTCTTTACTTGTATCTTTGTTCCCTTATGTTACCTCTGGAGAAAGAGAAGCTTATAGTCGAGAGTTATTAATCTGAAGAAAAACGTAGAGATATTATAAGTGCGAGATAGATTCGAATCTGAGCTGGGATATAGGTGATATGGTTTATAACTTAATATTGAGGAATTTAGCAACATATCTAGACTTTGGCTGCTTAGTGTTGGGTTTTATTTGCCCTAAATTTCTTACCATAAATAGGTTTTCCTTGTAGGAAAAGGTTTTGGATTGACTAATCTTTTTCTTGTAGGAAAAGGTTTAGGACTCTATAAATAGAGGCATGTTCCTTCTAACTTAATCAGCATTCACAATGTAGTCTTAAGAGCTTTAAGAGTTTTGGTTAGGGGGAGAATTTGTGGGTCACAAGCTTGATATGTTATCACTTGTGTGAACCTCCCATGTATTCCGAGTGAATTGGTTGAGGTTGTTTCTCTCTATATTTTGTACTCTCATATTTATAGTGGATTGCTCATCTCCTTTGTGGACGTAGGTCGATTGACCGAACCACGTTAAATCTCTGTGTCTTTTGGTATATTTCTCGTTGTCTTCTTACTCGTGGTCTTTCGAGGTTTGCTTCGCTAGCTTCCGCATTTACACCTGCTTATTTCCGGTCCTAACAAGTGGTATCAGAGCCAAATTCAATAACGAAGTCAGGTTCAGTGGTTCGATAATCGATGATTAAACCAGGTTAGAAAGATGTGTTCATCTAGGCGGTGTAGTTCTAGCAGTAACCTTTTTGACAGTAATGAAGATTTTGTTGGAGAAATTGTTTCAGAGAGATTCTTTATGTTGAGACATAAATTTTGCAAAGGAGATTATGGAGAGGAGAAGCAAGTTGTTGAAGATTAAGTCAAGAAGGTGGACAAATTTATTTTGTCAGAAATTCAGGCCAAGGGGGAGATTTGTTGGGTTTTATTTGCCTTAAATTTCCTACCATAAATAGGTTTTCCTTGTAGGAAAAGGATTTGGGTACTCTATAAATAGAGGCATGTTCCTTCTAACTTAATCAGCATTCACAATGTAGTCTTAAGAGCTTTGAGAGTTTTGGTTAGGGGAAGAATTTGTGGGTCACAAGCTTGATATGTTATCACTTGTGTGAACCTCCCATGTATTCCGAGTGAATTGGTTGAGGTCGTTTCCCTCTGTATTTATACTCTCATATTTATAGTGGATTGTTCATCTCCTTTCTGGACGTAGGTCGATTGACCAAACCACGTTAAATCTCTGTGTCTTTTGGTATATTTATAGTTGTTTTCTTACTCGTGGTCTTTCGAGGTTTGCTTTGCTAGCTTCCGCATTTAAACCTGCTTATTTCCGGTCCTAACACTTAGTTCAATACTTAGCTTTGTCTGGTAATTTTAGTGGTACATTATCTCCCTACTGATGTAAATTATTTTCTTCTTACGAAGATTCTTTCTTTTTCAACATCTGTAGATTGGACAAGGTACATATAGCAGTGTTTACCGAGCACGTGATATTGGAAATGGTAAAATGGTCGCCCTGAAGAAGGTGCGATTTGACAATTTCCAACCAGATAGTGTCAGATTTATGGCACGAGAAATTGCAATTCTCCGCAAACTTGACCATCCAAACATTATGAAGCTGGAAGGGATAATCACTTCTCGGTTATCATGTAGCATTTACCTTGTTTTCGAGTATATGGAACATGACCTATCTGGATTGTTATCATGTCCTGACATCAAATTTAGTGATTCGCAGGTTGGTTCATCTTTGACAATGTCTTTCTTTCATTGAATTTGGTATTAAGATCACTATTTGAATCTATCTTGTCTTGCAAAATGTAAATGGAAGAAGATTCTCTTTGTTTATTGAATTTTCTTTTTGCGTGGAAGTAGATCAAATGCTACATGCAGCAGCTTCTGAGCGGACTAGAGCACTGCCATTCACGAGGGATAATGCATCGGGATATTAAAGTTTCCAACATTTTGGTTAACAATGAAGGAACTCTGAAAA</genome_strand>
        <mrna_strand>CGTTGCATAACACGCAAAGAAAAGAGAAGGAATCCCATCTCTCTGTTCTTCTCCACCTCAAACTATTACCTCTTTTCTCAGATCAATTTTATGAAAACAATTTTTTTTTTGCAGATACAATGAGCTAATTTGGGGAGAGACCCTTTTTCCCGCACCCATTATTTTCACCTCCCTTGACCCGTTGAATCATACGGGTCGATCTGGGTCTCTCCCAACTGGATCGAATTCATTTATGGGTTTTGGGGGGTCATGGGTTGCGTCAGCTCCAAGCAGGCCACGTCCCATTCCCCGCCCCACGATTCGTCGGTGAATGTTGCCGGTGTCGACAATGTCGATCCATTATTGCATATTGGATTTGCCCCTTTGGAGAAGATCAAAGAGGAGCCTGAGAAAGAGGGAGAGGATTCCGTTAGACGATTTTCGGGGAAATTGAGAGCATCCAAGAAGGGAAATTCTGATAAGAAGGCGGCTAGTTTTAGCATCAAATTTGGAAGGTTAACTGAAGGTGAACATTTGGCCGCCGGATGGCCTGTTTGGCTGACTGCCGTTGCCGGTGAAGCTATTGATGGATGGATGCCTCTGAAATCAAACATGTTCCAGAAATTAGAAAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGACAAGGTACATATAGCAGTGTTTACCGAGCACGTGATATTGGAAATGGTAAAATGGTCGCCCTGAAGAAGGTGCGATTTGACAATTTCCAACCAGATAGTGTCAGATTTATGGCACGAGAAATTGCAATTCTCCGCAAACTTGACCATCCAAACATTATGAAGCTGGAAGGGATAATCACTTCTCGGTTATCATGTAGCATTTACCTTGTTTTCGAGTATATGGAACATGACCTATCTGGATTGTTATCATGTCCTGACATCAAATTTAGTGATTCGCAG.........................................................................................................................................ATCAAATGCTACATGCAGCAGCTTCTGAGCGGACTAGAGCACTGCCATTCACGAGGGATAATGCATCGGGATATTAAAGTTTCCAACATTGTGGTTAACAATGAATGAACTCTGAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U599513" ref_strand="+" ref_description="SGN-U599513 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|157342392|emb|CAO64505.1| (e_value=4e-68) unnamed; (*ATH) AT1G74330.1 (e_value=4e-66)  Symbol: None | similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:At5g39420.1); similar to putative CRK1 protein [Oryza sativa (japonica cultivar-group)] (GB:NP_913178.1); contains InterPro domain Serine/threonine protein kinase, ... ; (*SWP) sp|Q9ZVM9|Y1461_ARATH (e_value=1e-52) Putative serine/threonine-protein kinase At1g54610 OS=Arabidopsis thaliana GN=At1g54610; ">
      <seq>cgtgtggttacattatggtatcgacctcctgaactactattgggatcaacaagttatggagtcactgtggatttgtggagtgttggttgcgtttttgctgaactctttttcggaaggccactcctgaaagggaggactgaggttgaacaactgcacaaaattttcaaactctgtggttccccacccgaagattactggaaaaggtctaaacttccacttgcaaccatgttcaaaccaaagcaaccatatgacagtacacttcgagatagatgtaaagaattaccaaaaagtgctgtaaaccttattgaaacacttatttcaatagatcctcataaacgtggaactgcttcatctgctctcaattctgagtatttcaataccaagccttatgcttgtgactcgtcaagcctgccaaagtacccaccgaacaaggaaattgatgcaaagttcagggaagaagcgagaagaaagagagccagttccacagtgcaaacatcggaaacttctaaaaattcaagaaaatccaggaaaggtcttcaagaaccaaacaatttctgcaaagttgttccaacagaggaagttgaggcaaatgttcatggttctcatagaaattacggtagtaatgcacagatatctaaaggaagacgagctactgtctcacggatatncatgaagccattgtatgacacagtatcagacgctgcttctcagatgactgatgagtctcaggagacagcactgttctttct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="+" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="72729" stop="74922"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="73029" g_stop="73169" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="141" r_length="141" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="73170" i_stop="73393" i_length="224">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="73394" g_stop="73621" g_length="228"/>
          <reference_exon_boundary r_type="cDNA" r_start="142" r_stop="369" r_length="228" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="73622" i_stop="73842" i_length="221">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.100" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="73843" g_stop="73940" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="370" r_stop="467" r_length="98" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="73941" i_stop="74253" i_length="313">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.727" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="74254" g_stop="74362" g_length="109"/>
          <reference_exon_boundary r_type="cDNA" r_start="468" r_stop="576" r_length="109" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="74363" i_stop="74448" i_length="86">
            <donor d_prob="0.879" d_score="1.00"/>
            <acceptor a_prob="0.923" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="74449" g_stop="74622" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="577" r_stop="749" r_length="173" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="+" ref_id="SGN-U599513" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>750</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U599513" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="73029" e_stop="73169"/>
          <exon e_start="73394" e_stop="73621"/>
          <exon e_start="73843" e_stop="73940"/>
          <exon e_start="74254" e_stop="74362"/>
          <exon e_start="74449" e_stop="74622"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGTGTGGTTACATTATGGTATCGACCTCCTGAACTACTATTGGGATCAACAAGTTATGGAGTCACTGTGGATTTGTGGAGTGTTGGTTGCGTTTTTGCTGAACTCTTTTTCGGAAGGCCACTCCTGAAAGGGAGGACTGAGGTCAGTATTTCCCAGATAACTTCTGTTGAATTTGATAAAATTTATCAAACATCTCTGAGAGCATGTTGCAAAAAGGGACATGATTGCTAAATAGTGCTAAATTAACACGACTGAAGCCTCCCCAAATAATATGAAGTGGTTAAATCATTCTCCTATATCGAATACGCAATAATATCACTGTTCCTTGTCAATTGTGAAAAGATCCTGGTTGTCTATTTCTGCAGGTTGAACAACTGCACAAAATTTTCAAACTCTGTGGTTCCCCACCCGAAGATTACTGGAAAAGGTCTAAACTTCCACTTGCAACCATGTTCAAACCAAAGCAACCATATGACAGTACACTTCGAGATAGATGTAAAGAATTACCAAAAAGTGCTGTAAACCTTATTGAAACACTTATTTCAATAGATCCTCATAAACGTGGAACTGCTTCATCTGCTCTCAATTCTGAGGTAAGCTTAACAAAGACACAGAGTGCATGAGTTTTTATCTCACCGGAAAATTCCGTTTTGACAGAGTCACCTCATTCTTTTTATTTTGCTTTTAGTTTTTTGTTCCTCATTGGTATTGATGATGTTTATGTTTTTTTCATTTGTTCTTAAGCATTATTGTTCTTTAACCTGGTTTTTATAGCTAACTTTTTGGTTCAAATTTATGTTGTACCTTTCTTTAGTATTTCAATACCAAGCCTTATGCTTGTGACTCGTCAAGCCTGCCAAAGTACCCACCGAACAAGGAAATTGATGCAAAGTTCAGGGAAGAAGCGAGAAGGTGAATTCCCTTCTTCTTCTTTTTTCTTCATGAAAGGATTTTACTGCACATGGTTCTATTAAATCATTGCCTAGCCCCCATATATGGGCCAGTAAAACAATAAAGCCCAAAGAACAATATATGCATTTCACTGTCAATGCTGCACCTCATAGTTATCTAGTTAACTTACCCAAACACATCACTATCGGGCTTCAAGTGATTTGGCTCCAACAAATTAAATTTATACATCTCTGTTTCTGATAATCGCGCACCTTTCTTGACTTTGCATCCCTCTTATTCCTCTTTAAGCTTAATTTGAGCCTTGCTTTTTCAGAAAGAGAGCCAGTTCCACAGTGCAAACATCGGAAACTTCTAAAAATTCAAGAAAATCCAGGAAAGGTCTTCAAGAACCAAACAATTTCTGCAAAGTTGTTCCAACAGAGGTTTCTGTCTTTTCTCACAGAAACATACATTCATTCACATTTCCTCTTGATAGTATATTGAGAAGGCTTGTCTTGTATTTTTGAAGGAAGTTGAGGCAAATGTTCATGGTTCTCATAGAAATTACGGTAGTAATGCACAGATATCTAAAGGAAGACGAGCTACTGTCTCACGGATATCAATGAAGCCATTGTATGACACAGTATCAGACGCTGCTTCTCAGATGACTGATGAGTCTCAAGGAGACAGCACTGTTCTTTCT</genome_strand>
        <mrna_strand>CGTGTGGTTACATTATGGTATCGACCTCCTGAACTACTATTGGGATCAACAAGTTATGGAGTCACTGTGGATTTGTGGAGTGTTGGTTGCGTTTTTGCTGAACTCTTTTTCGGAAGGCCACTCCTGAAAGGGAGGACTGAG................................................................................................................................................................................................................................GTTGAACAACTGCACAAAATTTTCAAACTCTGTGGTTCCCCACCCGAAGATTACTGGAAAAGGTCTAAACTTCCACTTGCAACCATGTTCAAACCAAAGCAACCATATGACAGTACACTTCGAGATAGATGTAAAGAATTACCAAAAAGTGCTGTAAACCTTATTGAAACACTTATTTCAATAGATCCTCATAAACGTGGAACTGCTTCATCTGCTCTCAATTCTGAG.............................................................................................................................................................................................................................TATTTCAATACCAAGCCTTATGCTTGTGACTCGTCAAGCCTGCCAAAGTACCCACCGAACAAGGAAATTGATGCAAAGTTCAGGGAAGAAGCGAGAAG.........................................................................................................................................................................................................................................................................................................................AAAGAGAGCCAGTTCCACAGTGCAAACATCGGAAACTTCTAAAAATTCAAGAAAATCCAGGAAAGGTCTTCAAGAACCAAACAATTTCTGCAAAGTTGTTCCAACAGAG......................................................................................GAAGTTGAGGCAAATGTTCATGGTTCTCATAGAAATTACGGTAGTAATGCACAGATATCTAAAGGAAGACGAGCTACTGTCTCACGGATATNCATGAAGCCATTGTATGACACAGTATCAGACGCTGCTTCTCAGATGACTGATGAGTCTC-AGGAGACAGCACTGTTCTTTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U562746" ref_strand="-" ref_description="SGN-U562746 Tomato 200607#2 [2 ESTs aligned] ">
      <seq>aggaagggttgggttttccgggcccttgttatttcagtcccagacgttcgactagaagaaggatagtcaaactcgaaaagctggtcgtaggtcccgattctatggagatatataattggaatggctaagaggactttgtgtctctcttgttggtacctcaaagttcatcgaaggttttggtatcgatccttgcagtgaatgttcttacatattttcaggaagctggtgaagttatcatgcataagatgcaagttcacatcatagaaatcataagggataagccagaatattgatgctcaaagtggtttgcatatttcattaacagattggagatctttgtaatgctcaccttttgctatccaaacttgattttccaatctcttttttctttttatttgcttttcatagtttgtattttacatgtttagctcatttcttatacagctttcacattatttttgtatataaaggtcatgggcaaagagggtatgatttattacagagttttatgtact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="+" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="75377" stop="76613"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="75677" g_stop="75783" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="107" r_length="107" r_score="0.963"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="75784" i_stop="75905" i_length="122">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="75906" g_stop="76313" g_length="408"/>
          <reference_exon_boundary r_type="cDNA" r_start="108" r_stop="515" r_length="408" r_score="0.966"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="+" ref_id="SGN-U562746" ref_strand="-">
        <total_alignment_score>0.965</total_alignment_score>
        <cumulative_length_of_scored_exons>515</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U562746" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="75677" e_stop="75783"/>
          <exon e_start="75906" e_stop="76313"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGAAGGGTTGGGTTCTCCGGGCCCTTGTTATCTCAGTCCCAGACGTTTGACTCGAAGAAGGATAGTCAAACTCGAAAAGCTGGTCGTAGGTCCCGATTCTATGGAGGTGAAATAAATCTTGTCATATTTTCCTTTACATCAACTAGACATATTTGAGTCACCTACTTCAGCCAAATATTGCTATTTTACAAACTTTTACCAAGTTTTTCTTTTTCTTTTGCCATGCAGATATATAATTGGAATGGCTAAGAGGACTTTGTGTCTCTCTTGTTGGTACCTCAAAGTTCATCGAAGGTTTTGGTATCGATCCTTGCAGTGAATGTTCTTACATATCTTCAGGAAGCTGGTGAAGAAATCATGCATAAGATGCAAGTTCACATCATAGAAATCAAAAGGGATAAGCCAGAATATTGATGCTCAAAGTGGTTTGCAAATTTCATTAACAGATTGGAGAACATTGAAATGCTCACCTTTTGCTATCCAAACTTGATTTTACAATCTCTTTTTTCTTTTTATTTGCTTTTCATAGTTTGTATTTTACATGTTTAGCTCATTTCTTATACAGCTTTCACATTATTTTTGTATATATATATCATGGGCAAAGAGGGTATGATTTATTACAGAGTTTTCTTTACT</genome_strand>
        <mrna_strand>AGGAAGGGTTGGGTTTTCCGGGCCCTTGTTATTTCAGTCCCAGACGTTCGACTAGAAGAAGGATAGTCAAACTCGAAAAGCTGGTCGTAGGTCCCGATTCTATGGAG..........................................................................................................................ATATATAATTGGAATGGCTAAGAGGACTTTGTGTCTCTCTTGTTGGTACCTCAAAGTTCATCGAAGGTTTTGGTATCGATCCTTGCAGTGAATGTTCTTACATATTTTCAGGAAGCTGGTGAAGTTATCATGCATAAGATGCAAGTTCACATCATAGAAATCATAAGGGATAAGCCAGAATATTGATGCTCAAAGTGGTTTGCATATTTCATTAACAGATTGGAGATCTTTGTAATGCTCACCTTTTGCTATCCAAACTTGATTTTCCAATCTCTTTTTTCTTTTTATTTGCTTTTCATAGTTTGTATTTTACATGTTTAGCTCATTTCTTATACAGCTTTCACATTATTTTTGTATATAAAGGTCATGGGCAAAGAGGGTATGATTTATTACAGAGTTTTATGTACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U600288" ref_strand="-" ref_description="SGN-U600288 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|157345731|emb|CAO15029.1| (e_value=1e-69) unnamed; (*ATH) AT5G39430.1 (e_value=1e-66) | Symbol: None | expressed protein | chr5:15792530-15794827 REVERSE | Aliases: MUL8.11, MUL8_11; ">
      <seq>tgtatattttaagatttctgaaactatagagaaagacgtctctcctcagttcctggaaagcatcaagaaacttctcgatgatgatatggagaaggttaaaggatttgcaaaagattcaatagttcctttcagagagaggttgaaaataatggttggggcggttaatccagaagatcttgtttccagttcaactgaaaggaagcttttgaatagttacaacgagaaacctgtgctttcccgtcctcaacacagcttttatgagggctcaaattactttgagattgatcttgacattcatcgcttcagctacatagcaagaaggggacttgatgcattcagagatcgtttacaacatggcatattggatcttggtctaacaattcaggcacaaaagccggaggagctgcccgagcaagtgcttgcttgtgtgagattgaacaagattgattttgttgacaatggacaaattccaactcttctgagcattgaggaagataattgttcatactaatttatacaaaatcagtgatacatttgcatattgcatgggggagttttcaaatggtcccttgatgatcaagcaattccaactttctatacaagcaaattaaaaaaaaaacattgtatgataagaaattgtattctgaaagatgaaatttttttaaaaaggtgatcatgttgatactaaggtccaccatttttcaactgatcacacccttaacataatttagtactaataagaaaaaaccactatcacttagcatttactttatttaagatattgtatatatttgag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="-" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="79621" stop="77404"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="79321" g_stop="79255" g_length="67"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="67" r_length="67" r_score="0.985"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="79254" i_stop="78671" i_length="584">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.982" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="78670" g_stop="78476" g_length="195"/>
          <reference_exon_boundary r_type="cDNA" r_start="68" r_stop="262" r_length="195" r_score="0.995"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="78475" i_stop="78367" i_length="109">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.974" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="78366" g_stop="78244" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="263" r_stop="385" r_length="123" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="78243" i_stop="78115" i_length="129">
            <donor d_prob="0.918" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="78114" g_stop="77704" g_length="411"/>
          <reference_exon_boundary r_type="cDNA" r_start="386" r_stop="796" r_length="411" r_score="0.976"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="-" ref_id="SGN-U600288" ref_strand="-">
        <total_alignment_score>0.985</total_alignment_score>
        <cumulative_length_of_scored_exons>796</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U600288" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="79321" e_stop="79255"/>
          <exon e_start="78670" e_stop="78476"/>
          <exon e_start="78366" e_stop="78244"/>
          <exon e_start="78114" e_stop="77704"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTATATTTTAAGATTTCTGAAACTACAGAGAAAGACGTCTCTCCTCAGTTCCTGGAAAGCATCAAGGTAGGTTATGTCTGATTTGTTCAAAAATAGTTTATCTATGTCAAACTTAATTATAACTGACATCGATATTCTCATTTATAATATATCTTTATCAAACTTGATTATAAGAACTTATACATATTCTCTTATTCACCTTATCCCTGAAAGTCAACTAAGTTTTTCTATTTGGGGTGTTCTTTATCTGGCATTTGATTTGTTAGACAAGAGAGCTAAACGTATTTTCACAATGTAAGTGTTTCCATCTAATCTGGCATTGATAGGATAAGCGCCTCATAATGTGTTTTCCCCTTTCTCGGCATAGCTGGAAATCTAAGTCTAGTTGATCGAGATGACAACACTTAACGTTGGGATGATTTTTCAGTTCACGTCCATGTGTCCGTAATTTTTCCCCTGCTCCTGGGGCAGGGGTTACTTCCACATGCAAAACATTAATCTTGGGATTTCCTTGTATCAAACTTTTGCTGACATGTTCTTTTTTTCCTTGTGAAAATGTGGTGATCCTCTAAGACGTTTACTTCATAGTAGAAATGGCGGATAGGGAGAAATTACTGGACTGATTTTCTTTCTATTGGCTTATGTGACAGAAACTTATCGATGATGATATGGAGAAGGTTAAAGGATTTGCAAAAGATTCAATAGTTCCTTTCAGAGAGAGGTTGAAAATAATGGTTGGGGCGGTTAATCCAGAAGATCTTGTTTCCAGTTCAACTGAAAGGAAGCTTTTGAATAGTTACAACGAGAAACCTGTGCTTTCCCGTCCTCAACACAGCTTTTATGAGGTGGATATATATATATATATATCTTTTCAATGATGATCTTTTACTTACTTCTCTATGTCAGTTAGCCATGTCTTGGCTGTTCTTGACATCAAAACGAATTCTGTTGCAGGGCTCAAATTACTTTGAGATTGATCTTGACATTCATCGCTTCAGCTACATAGCAAGAAGGGGACTTGATGCATTCAGAGATCGTTTACAACATGGCATATTGGATCTTGGTCTAACAATTCAGGTTTCTTGTTATTATACTTTTCCCTTCTTGAGAATTAGAAAATGAGCTCATGCTTTGGCTTTTTTAAATGATGTGCACAGATTTAACTTATATATACTGATAACGTAAAAATAACTCTAAATCCTGTAGGCACAAAAGCCGGAGGAGCTGCCCGAGCAAGTTCTTGCTTGTGTGAGATTGAACAAGATTGATTTTGTTGACAATGGACAAATTCCAACTCTTCTGAGCATTGAGGAAGATAATTGTTCATACTAATTTATACAAAATCAGTGATACATTTGCATATTGCATGGGGGAGTTTTCAAATGGTCCCTTGATGATCAAGCAATTCCAACTTTCTATACAAGCAAA-AAAAAAAAAAACATTGTATAATAAGAAATTGTATTCTGAAAGATGAAATTTTTAAAAAAAGGTGATCATGTTGATACTAAGGTCCACCATTTTTCAACTGATCACACCCCTAACATAATTTAGTACTAATAAGAAAAAACCAATATCACTTAGCATTTACTTTATTTAAGATATTGTATATATTTTGAG</genome_strand>
        <mrna_strand>TGTATATTTTAAGATTTCTGAAACTATAGAGAAAGACGTCTCTCCTCAGTTCCTGGAAAGCATCAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACTTCTCGATGATGATATGGAGAAGGTTAAAGGATTTGCAAAAGATTCAATAGTTCCTTTCAGAGAGAGGTTGAAAATAATGGTTGGGGCGGTTAATCCAGAAGATCTTGTTTCCAGTTCAACTGAAAGGAAGCTTTTGAATAGTTACAACGAGAAACCTGTGCTTTCCCGTCCTCAACACAGCTTTTATGAG.............................................................................................................GGCTCAAATTACTTTGAGATTGATCTTGACATTCATCGCTTCAGCTACATAGCAAGAAGGGGACTTGATGCATTCAGAGATCGTTTACAACATGGCATATTGGATCTTGGTCTAACAATTCAG.................................................................................................................................GCACAAAAGCCGGAGGAGCTGCCCGAGCAAGTGCTTGCTTGTGTGAGATTGAACAAGATTGATTTTGTTGACAATGGACAAATTCCAACTCTTCTGAGCATTGAGGAAGATAATTGTTCATACTAATTTATACAAAATCAGTGATACATTTGCATATTGCATGGGGGAGTTTTCAAATGGTCCCTTGATGATCAAGCAATTCCAACTTTCTATACAAGCAAATTAAAAAAAAAACATTGTATGATAAGAAATTGTATTCTGAAAGATGAAATTTTTTTAAAAAGGTGATCATGTTGATACTAAGGTCCACCATTTTTCAACTGATCACACCCTTAACATAATTTAGTACTAATAAGAAAAAACCACTATCACTTAGCATTTACTTTATTTAAGATATTGTATATA-TTTGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U569843" ref_strand="+" ref_description="SGN-U569843 Tomato 200607#2 [11 ESTs aligned] (*GB) gi|157345731|emb|CAO15029.1| (e_value=1e-22) unnamed; ">
      <seq>gatatatatataaatataaatataaataataagatcagttggtaaacagagcaggtgcggaagtgtgtttggatccgacgtcggagtccacacttcctcttcctattctctgtattcctccatttttgttctttttttcttttattttcaacagaaagagcagaagacgctggcttcgttcttccttcactatcaagacaggtgatgcttaattttggaacttttactgaattttgagagtatccgtatttcttgtgttccacctggaagtggtgtctcgtatgggatagtatcgattggcagaaaaatttgtcacctgagtcagaggaatgggtgcttgtgtatcaactccagcaattccaatcaaaatgaggaggaaacttcctggtcgccctagaaagtaccatggaaagaactcaaaatctgcttcgaaaataaatggtgatgcaggatcaatggttacagatattgagtttgttcacaaaactacgacctgcagaagatctgagtgctccaattctaaagttcatgttactcagatgcagtggcaccatagtcaaatagatgcaaatgttctttgccaggaggatgcatggtttgacacagtcagcatttttgagtctgactcagatgatgaattcagtagtgttaatgggaggtcgagtttctcaagtaaggaaatcaacaattataaggctctctctgagaacatctgttgaagaagaaaaagtggatttcgtgcaccaagaagtatcttttgcgtcccagggctgggctcgttgttcctca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="-" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="82998" stop="79512"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82700" g_stop="82509" g_length="192"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="197" r_length="197" r_score="0.875"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82508" i_stop="81606" i_length="903">
            <donor d_prob="1.000" d_score="0.96"/>
            <acceptor a_prob="0.410" a_score="0.88"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81605" g_stop="81564" g_length="42"/>
          <reference_exon_boundary r_type="cDNA" r_start="198" r_stop="239" r_length="42" r_score="0.881"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81563" i_stop="81325" i_length="239">
            <donor d_prob="0.866" d_score="0.88"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="81324" g_stop="80991" g_length="334"/>
          <reference_exon_boundary r_type="cDNA" r_start="240" r_stop="573" r_length="334" r_score="0.997"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="80990" i_stop="80686" i_length="305">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.954" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="80685" g_stop="80602" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="574" r_stop="658" r_length="85" r_score="0.976"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="80601" i_stop="80181" i_length="421">
            <donor d_prob="0.997" d_score="0.96"/>
            <acceptor a_prob="0.168" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="80180" g_stop="80100" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="659" r_stop="738" r_length="80" r_score="0.988"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="80099" i_stop="79864" i_length="236">
            <donor d_prob="0.977" d_score="0.98"/>
            <acceptor a_prob="0.318" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="79863" g_stop="79812" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="739" r_stop="789" r_length="51" r_score="0.962"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="-" ref_id="SGN-U569843" ref_strand="+">
        <total_alignment_score>0.960</total_alignment_score>
        <cumulative_length_of_scored_exons>785</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U569843" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82700" e_stop="82509"/>
          <exon e_start="81605" e_stop="81564"/>
          <exon e_start="81324" e_stop="80991"/>
          <exon e_start="80685" e_stop="80602"/>
          <exon e_start="80180" e_stop="80100"/>
          <exon e_start="79863" e_stop="79812"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTGTGTATATATATATATATATAAATAATAAGATCAGTTGGTAAACAGAGCAGGTGCGGAAGTGTGCTTGGATCCGGCGTCGGAGCCCACACTTCCTCTTCCTATTCTCTGTATTCCTCCATTTTT-TT-TTCTTTT-A--TACTTTCAACAGAAAGAGCCGAAGACGCTGCCTTCGTTCTTCCTTCACTATCAAGGTACGTCCCTTTTTTCTTCTGCTTATTTATTGGCACTGTTGTTGAATCGCATTTCATGGTTTCAAATGGAAGAATATTGTTTCGAATTTTTGCTTAATTATTGTTTTTAAGGATTCATAAATTGTTGTCATTATGGTTCTTCGTTTTCATATTTGGTTCTTATTTTGGGGTTTTCTGTTTTCACTTTCATTCATCTGAATTTCTACGGAAATACTTTTTTCTTTTTCTGTTGTTAAGATCATTATTGTTTTTGTTTATTTGTCTGTTGGGGTGCGTTTTATCCATTACCTTTTATGGATTTTGTCCTCTGCTTATTATGATGTGACCCATTTTGTTTTTTTTTTCAATTATAGCTGATCTGACATTTTTTAATTTGATTCAGTCTCCTAAAGTGAAAACAAACTCATCATGTTCATTCCATATCCTTTTGAAAAAGGCAAGGCAACTAATATAATTGTTTTTTCTTTAAAATAAAATAAAAAAAGTGGATGATAAACAGCTTATCTTGCCAATGGAGTATTTGGGGTTCGTTTCGTAGCTACTAAAGAGATAAATTGTTCATGTATTAGATTCTGCATAAGTTATGATGTTATATGATGTTCAATAACTAATTAGGATGTCATTAATGGAATAACTAATACATGGATTATTAATATCTGCATAATTCTAGTCAGCTGGCAAACGTCTTCACCTTTTCAGTTAATGTCTTCCTTCTCTTTTTCTTTTTCTTCTTTTCCATCTGCAAATCACATGAAACAACTGAAGTGCAGCTTGTAGAATTTATTTATTTAGATGTCTTTTGGGATTCATTGCAAGAAGTTGTCTATTTCAGGTCTTCAATAAATTTGTGAACTGCCAAATAAAGACTAATCTAATGTTGAGTAATTAAATGCTTCTTTGCAGATTGATGATGCTTAATTTTGGAACTTTTACTTAATTCTGAGAGTAAGACTTAAACTTCTTAAGCTCACTCTTCTTAAATTAGTCATTTTACATATCTTGTTGTTAGTTCATGCACATACCTATGACCGATAATTATTTTCACTTACCGAAATTTGGGGTATGAGTACTATTAGCGACATGGTCATTGAGGCTTCATATGTAACTGTCGCAAGTTGTCTGAGGTCGTTGTTGTACAGTACTATAACCAATCATTTAAAAAAATTCTCTTATTCATGTGCCAGGTATCCGTATTTCTTGTGTTCCACCTGGAAGTGGTGTCTCGTATGGGATAGTATTGATTGGCAGAAAAATTTGTCACCTGAGTCAGAGGAATGGGTGCTTGTGTATCAACTCCAGCAATTCCAATCAAAATGAGGAGGAAACTTCCTGGTCGCCCTAGAAAGTACCATGGAAAGAACTCAAAATCTGCTTCGAAAATAAATGGTGATGCAGGATCAATGGTTACAGATATTGAGTTTGTTCACAAAACTACGACCTGCAGAAGATCTGAGTGCTCCAATTCTAAAGTTCATGTTACTCAGATGCAGTGGCACCATAGTCAAATAGATGCAAATGGTATGTGATCTTTCTGTTTCTTATTTTGAACCTTATCCATTGCTTAGACTTTTGATTGATGACAAATCTATCAAATTTAACCATATTAACTGCGAATTTTATTTTGTTGATGGCCTTAAATATAGTTCATTGATCGATGGGTGTATTGTCTATATTGTGTGGTGATTTTCTGTTGCTAAGAAGGACCATGTGATTGTTCATTTTCCTTCAAAGCATTTTAAAAGGAGTTTAGTTGTTTGAGCAACTGACAAATCAGAATTATTTGACTACAACTTGCAATAATGAGCGGTTTACCTGCTTTGCAGTTCTTTGCCAGGAGGATGCATGGTTTGACACAGTCAGCATTTTTGAGTCTGACTCAGATGATGAATTCAGTAGTGTTAAT-GGAGGTAACTACTTTCGTATCTTCATTTTTATACTTATAGAGAATGACTTGCTCAGTGTTTGGACTAAGAACACATCTTCTTCTTTATACAGTGCTTGATTATTAATAGATAACGTGATCATTGGCTAGTTTTTATCCCTTTCATTTAGCTATTGTTATTTATGGGACGGGGTTTTTCATCTTATCTTTAGTGGAAATTTCTGAATGATTAATATTCTCGGAATACTTTTTGCTTTGTGAATCTTAGCAGTCCAAGGTTCTTATAGTCCTTCAGATCAATGTATTTAATTTAATCTATACCCCTTGCAACCTTACGTAGTTATGTACATGTGTTCACTCTCTCTATTACATATCATAGTCTTCTCTACCACAGCTAGTTACTTCCATGAGTTTCAGTGACAAGATCATTAATGCATCAAATTCAGGTCGAGTTTCTCAAGTAAGGAAATCAACAATTATAAGGCTCTCTCTGAGAACATCTGTTGAAGAAGAAAAAAGTGGATTTCGTAAGTACCTTGTGACTTTCCATTTAGTCATTACTCTTCAGTATAAATTGAGTCCCATTTGAGAGGAATTTGTGTCATAACCTCCTGGTCATTTTGTAAACTAAGAACAATATAATCTTATTGAATCATGATGTGACAGTCCTGTTTTATTTCCTTCTTCTGTAATGTAAAGAAATGTGCAAAAACTAATGCAAAGGCAGAATTGCAATACATTAACCATAATGGTACTCCTGTAGGTGCACCAAGAAAGTATCTTTTGCGTCCCAGGGCTGGGCTCATTGTTCCTCA</genome_strand>
        <mrna_strand>GATATATATATAAATATAAATATAAATAATAAGATCAGTTGGTAAACAGAGCAGGTGCGGAAGTGTGTTTGGATCCGACGTCGGAGTCCACACTTCCTCTTCCTATTCTCTGTATTCCTCCATTTTTGTTCTTTTTTTCTTTTATTTTCAACAGAAAGAGCAGAAGACGCTGGCTTCGTTCTTCCTTCACTATCAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGGTGATGCTTAATTTTGGAACTTTTACTGAATTTTGAGA...............................................................................................................................................................................................................................................GTATCCGTATTTCTTGTGTTCCACCTGGAAGTGGTGTCTCGTATGGGATAGTATCGATTGGCAGAAAAATTTGTCACCTGAGTCAGAGGAATGGGTGCTTGTGTATCAACTCCAGCAATTCCAATCAAAATGAGGAGGAAACTTCCTGGTCGCCCTAGAAAGTACCATGGAAAGAACTCAAAATCTGCTTCGAAAATAAATGGTGATGCAGGATCAATGGTTACAGATATTGAGTTTGTTCACAAAACTACGACCTGCAGAAGATCTGAGTGCTCCAATTCTAAAGTTCATGTTACTCAGATGCAGTGGCACCATAGTCAAATAGATGCAAATG.................................................................................................................................................................................................................................................................................................................TTCTTTGCCAGGAGGATGCATGGTTTGACACAGTCAGCATTTTTGAGTCTGACTCAGATGATGAATTCAGTAGTGTTAATGGGAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGAGTTTCTCAAGTAAGGAAATCAACAATTATAAGGCTCTCTCTGAGAACATCTGTTGAAGAAG-AAAAAGTGGATTTC............................................................................................................................................................................................................................................GTGCACCAAG-AAGTATCTTTTGCGTCCCAGGGCTGGGCTCGTTGTTCCTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U594189" ref_strand="+" ref_description="SGN-U594189 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|157345731|emb|CAO15029.1| (e_value=7e-27) unnamed; (*ATH) AT1G13970.1 (e_value=4e-12) | Symbol: None | expressed protein | chr1:4779520-4782531 REVERSE | Aliases: F16A14.19; ">
      <seq>gagaaaaaaaacaaaaaaaaaatagttgtgtatatatatataaatataaatataaataataagatcagttggtaaacagagcaggtgcggaagtgtgtttggatccgacgtcggagtccacacttcctcttcctattctctgtattcctccatttttgttctttttttcttttattttcaacagaaagagcagaagacgctggcttcgttcttccttcactatcaagggattattaatatctgcataattctagtcagcaggcaaacgtcttcaccttttcaacaggtgatgcttaattttggaacttttactgaattttgagagtatccgtatttcttgtgttccacctggaagtggtgtctcgtatgggatagtatcgattggcagaaaaatttgtcacctgagtcagaggaatgggtgcttgtgtatcaactccagcaattccaatcaaaatgaggaggaaatttcctggtcgccctagaaagtaccatggaaagaactcaaaatctgcttcgaaaataaatggcgatgcaggatcaatggttacagatattgctgttagtgagtttgttcacaaaactacgacctgcagaagatctgagtgctccaattctaaagttcatgttactcagatgcagtggcaccatagtcaaatagatgcaaatgttctttgccaggaggatgcatggtttgacacagtcagcatttttgagtctgactcagatgatgaattcagtagtgttcatggaggtcgagttttctcagtaaggaaatcaacaattataaggctctctctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="-" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="83026" stop="79834"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82727" g_stop="82509" g_length="219"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="227" r_length="227" r_score="0.868"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82508" i_stop="81866" i_length="643">
            <donor d_prob="1.000" d_score="0.96"/>
            <acceptor a_prob="0.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81865" g_stop="81811" g_length="55"/>
          <reference_exon_boundary r_type="cDNA" r_start="228" r_stop="282" r_length="55" r_score="0.982"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81810" i_stop="81606" i_length="205">
            <donor d_prob="0.817" d_score="0.98"/>
            <acceptor a_prob="0.410" a_score="0.88"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="81605" g_stop="81564" g_length="42"/>
          <reference_exon_boundary r_type="cDNA" r_start="283" r_stop="324" r_length="42" r_score="0.881"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="81563" i_stop="81325" i_length="239">
            <donor d_prob="0.866" d_score="0.88"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="81324" g_stop="80991" g_length="334"/>
          <reference_exon_boundary r_type="cDNA" r_start="325" r_stop="667" r_length="343" r_score="0.937"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="80990" i_stop="80686" i_length="305">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.954" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="80685" g_stop="80602" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="668" r_stop="751" r_length="84" r_score="0.988"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="80601" i_stop="80181" i_length="421">
            <donor d_prob="0.997" d_score="0.98"/>
            <acceptor a_prob="0.168" a_score="0.91"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="80180" g_stop="80134" g_length="47"/>
          <reference_exon_boundary r_type="cDNA" r_start="752" r_stop="798" r_length="47" r_score="0.915"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="-" ref_id="SGN-U594189" ref_strand="+">
        <total_alignment_score>0.925</total_alignment_score>
        <cumulative_length_of_scored_exons>781</cumulative_length_of_scored_exons>
        <coverage percentage="0.979" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U594189" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82727" e_stop="82509"/>
          <exon e_start="81865" e_stop="81811"/>
          <exon e_start="81605" e_stop="81564"/>
          <exon e_start="81324" e_stop="80991"/>
          <exon e_start="80685" e_stop="80602"/>
          <exon e_start="80180" e_stop="80134"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGAAAAAAAACAAAAAAAAAATTAGTTGTGTGTATATATAT--ATAT--ATATAAATAATAAGATCAGTTGGTAAACAGAGCAGGTGCGGAAGTGTGCTTGGATCCGGCGTCGGAGCCCACACTTCCTCTTCCTATTCTCTGTATTCCTCCA--TTT-TT-TTTTCTT-TTATACTTTCAACAGAAAGAGCCGAAGACGCTGCCTTCGTTCTTCCTTCACTATCAAGGTACGTCCCTTTTTTCTTCTGCTTATTTATTGGCACTGTTGTTGAATCGCATTTCATGGTTTCAAATGGAAGAATATTGTTTCGAATTTTTGCTTAATTATTGTTTTTAAGGATTCATAAATTGTTGTCATTATGGTTCTTCGTTTTCATATTTGGTTCTTATTTTGGGGTTTTCTGTTTTCACTTTCATTCATCTGAATTTCTACGGAAATACTTTTTTCTTTTTCTGTTGTTAAGATCATTATTGTTTTTGTTTATTTGTCTGTTGGGGTGCGTTTTATCCATTACCTTTTATGGATTTTGTCCTCTGCTTATTATGATGTGACCCATTTTGTTTTTTTTTTCAATTATAGCTGATCTGACATTTTTTAATTTGATTCAGTCTCCTAAAGTGAAAACAAACTCATCATGTTCATTCCATATCCTTTTGAAAAAGGCAAGGCAACTAATATAATTGTTTTTTCTTTAAAATAAAATAAAAAAAGTGGATGATAAACAGCTTATCTTGCCAATGGAGTATTTGGGGTTCGTTTCGTAGCTACTAAAGAGATAAATTGTTCATGTATTAGATTCTGCATAAGTTATGATGTTATATGATGTTCAATAACTAATTAGGATGTCATTAATGGAATAACTAATACATGGATTATTAATATCTGCATAATTCTAGTCAGCTGGCAAACGTCTTCACCTTTTCAGTTAATGTCTTCCTTCTCTTTTTCTTTTTCTTCTTTTCCATCTGCAAATCACATGAAACAACTGAAGTGCAGCTTGTAGAATTTATTTATTTAGATGTCTTTTGGGATTCATTGCAAGAAGTTGTCTATTTCAGGTCTTCAATAAATTTGTGAACTGCCAAATAAAGACTAATCTAATGTTGAGTAATTAAATGCTTCTTTGCAGATTGATGATGCTTAATTTTGGAACTTTTACTTAATTCTGAGAGTAAGACTTAAACTTCTTAAGCTCACTCTTCTTAAATTAGTCATTTTACATATCTTGTTGTTAGTTCATGCACATACCTATGACCGATAATTATTTTCACTTACCGAAATTTGGGGTATGAGTACTATTAGCGACATGGTCATTGAGGCTTCATATGTAACTGTCGCAAGTTGTCTGAGGTCGTTGTTGTACAGTACTATAACCAATCATTTAAAAAAATTCTCTTATTCATGTGCCAGGTATCCGTATTTCTTGTGTTCCACCTGGAAGTGGTGTCTCGTATGGGATAGTATTGATTGGCAGAAAAATTTGTCACCTGAGTCAGAGGAATGGGTGCTTGTGTATCAACTCCAGCAATTCCAATCAAAATGAGGAGGAAACTTCCTGGTCGCCCTAGAAAGTACCATGGAAAGAACTCAAAATCTGCTTCGAAAATAAATGGTGATGCAGGATCAATGGTTACAGATA-------T--TGAGTTTGTTCACAAAACTACGACCTGCAGAAGATCTGAGTGCTCCAATTCTAAAGTTCATGTTACTCAGATGCAGTGGCACCATAGTCAAATAGATGCAAATGGTATGTGATCTTTCTGTTTCTTATTTTGAACCTTATCCATTGCTTAGACTTTTGATTGATGACAAATCTATCAAATTTAACCATATTAACTGCGAATTTTATTTTGTTGATGGCCTTAAATATAGTTCATTGATCGATGGGTGTATTGTCTATATTGTGTGGTGATTTTCTGTTGCTAAGAAGGACCATGTGATTGTTCATTTTCCTTCAAAGCATTTTAAAAGGAGTTTAGTTGTTTGAGCAACTGACAAATCAGAATTATTTGACTACAACTTGCAATAATGAGCGGTTTACCTGCTTTGCAGTTCTTTGCCAGGAGGATGCATGGTTTGACACAGTCAGCATTTTTGAGTCTGACTCAGATGATGAATTCAGTAGTGTTAATGGAGGTAACTACTTTCGTATCTTCATTTTTATACTTATAGAGAATGACTTGCTCAGTGTTTGGACTAAGAACACATCTTCTTCTTTATACAGTGCTTGATTATTAATAGATAACGTGATCATTGGCTAGTTTTTATCCCTTTCATTTAGCTATTGTTATTTATGGGACGGGGTTTTTCATCTTATCTTTAGTGGAAATTTCTGAATGATTAATATTCTCGGAATACTTTTTGCTTTGTGAATCTTAGCAGTCCAAGGTTCTTATAGTCCTTCAGATCAATGTATTTAATTTAATCTATACCCCTTGCAACCTTACGTAGTTATGTACATGTGTTCACTCTCTCTATTACATATCATAGTCTTCTCTACCACAGCTAGTTACTTCCATGAGTTTCAGTGACAAGATCATTAATGCATCAAATTCAGGTCGAGTTTCTCAAGTAAGGAAATCAACAATTATAAGGCTCTCTCTG</genome_strand>
        <mrna_strand>GAGAAAAAAAACAAAAAAAAAA-TAGTTGTGTATATATATATAAATATAAATATAAATAATAAGATCAGTTGGTAAACAGAGCAGGTGCGGAAGTGTGTTTGGATCCGACGTCGGAGTCCACACTTCCTCTTCCTATTCTCTGTATTCCTCCATTTTTGTTCTTTTTTTCTTTTATTTTCAACAGAAAGAGCAGAAGACGCTGGCTTCGTTCTTCCTTCACTATCAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATTATTAATATCTGCATAATTCTAGTCAGCAGGCAAACGTCTTCACCTTTTCA.............................................................................................................................................................................................................ACAGGTGATGCTTAATTTTGGAACTTTTACTGAATTTTGAGA...............................................................................................................................................................................................................................................GTATCCGTATTTCTTGTGTTCCACCTGGAAGTGGTGTCTCGTATGGGATAGTATCGATTGGCAGAAAAATTTGTCACCTGAGTCAGAGGAATGGGTGCTTGTGTATCAACTCCAGCAATTCCAATCAAAATGAGGAGGAAATTTCCTGGTCGCCCTAGAAAGTACCATGGAAAGAACTCAAAATCTGCTTCGAAAATAAATGGCGATGCAGGATCAATGGTTACAGATATTGCTGTTAGTGAGTTTGTTCACAAAACTACGACCTGCAGAAGATCTGAGTGCTCCAATTCTAAAGTTCATGTTACTCAGATGCAGTGGCACCATAGTCAAATAGATGCAAATG.................................................................................................................................................................................................................................................................................................................TTCTTTGCCAGGAGGATGCATGGTTTGACACAGTCAGCATTTTTGAGTCTGACTCAGATGATGAATTCAGTAGTGTTCATGGAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGAGTTTTCTCAGTAAGGAAATCAACAATTATAAGGCTCTCTCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U563346" ref_strand="+" ref_description="SGN-U563346 Tomato 200607#2 [8 ESTs aligned] ">
      <seq>caggtgacattgagcaaaatgtttgcattgagcgcattgcataatctaaatatgaatattatcacatattttagattccatatacgttgctatagaacctgagatatttatgaaaatgattacatgctctagtgattgagcagtcttgtcaattctaaaagttgtataggctccttatttgagttgtcatttcctaacatgtaatgaatgtttttctgcctttctatgagcgcttcagagtttgctaaaaaaggataaagaggagcaaaatgatcctacaattgcaagttttcatgagagactagccacagcttatcaagatccagcactgctgcatgtcggatattctggaaataatgcaagtatcattgccccccttcttggtactgctgaagttgatgcttagggtgtaatcgagttattgcttactgtaatcatgtaacacttttagttggcaaacatgtgggtatgtagtttgagttcaatctgctagtctgtataactccaactttttggttcagtactttggataactccactttctagttgacactgtattagatagtcaaaggtataactttttactgtcaagagacttgatcaagaatctgcataccagaaagtccacaactaactataaaggcctgatccttcaggaactttaatgcctatttttattcttatatggaggaactagaaaaggtcaaatgtgcatcaccccaaagctacttgaattggtcaattatttgcagtgatcatgaagtgcaaacaattgcattaaagagattcatatttgtgcctgacgtctccatttgtgcgtgagaactttttggctttcagtttttaatgccttctcgttggaatcttatcagtccctttctgaacgaatgataattaatgaactattatacatcaagttacatcacaagcactagaagaattgttaatcgttttggaacttccatgtggaggattcggagtggctgttgacatttcttttcttgattatgtgaaaaaatcagctttaagcctgacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="-" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="90226" stop="88591"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="89927" g_stop="88891" g_length="1037"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="1036" r_length="1036" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="-" ref_id="SGN-U563346" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>1037</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U563346" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="89927" e_stop="88891"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGGTGACATTGAGCAAAATGTTTGCATTGAGCGCATTGCATAATCTAAATATGAATATTATCACATATTTTAGATTCCATATACGTTGCTATAGAACCTGAGATATTTATGAAAATGATTACATGCTCTAGTGATTGAGCAGTCTTGTCAATTCTAAAAGTTGTATAGGCTCCTTATTTGAGTTGTCATTTCCTAACATGTAATGAATGTTTTTCTGCCTTTCTATGAGCGCTTCAGAGTTTGCTAAAAAAGGATAAAGAGGAGCAAAATGATCCTACAATTGCAAGTTTTCATGAGAGACTAGCCACAGCTTATCAAGATCCAGCACTGCTGCATGTCGGATATTCTGGAAATAATGCAAGTATCATTGCCCCCCTTCTTGGTACTGCTGAAGTTGATGCTTAGGGTGTAATCGAGTTATTGCTTACTGTAATCATGTAACACTTTTAGTTGGCAAACATGTGGGTATGTAGTTTGAGTTCAATCTGCTAGTCTGTATAACTCCAACTTTTTGGTTCAGTACTTTGGATAACTCCACTTTCTAGTTGACACTGTATTAGATAGTCAAAGGTATAACTTTTTACTGTCAAGAGACTTGATCAAGAATCTGCATACCAGAAAGTCCACAACTAACTATAAAGGCCTGATCCTTCAGGAACTTTAATGCCTATTTTTATTCTTATATGGAGGAACTAGAAAAGGTCAAATGTGCATCACCCCAAAGCTACTTGAATTGGTCAATTATTTGCAGTGATCATGAAGTGCAAACAATTGCATTAAAGAGATTCATATTTGTGCCTGACGTCTCCATTTGTGCGTGAGAACTTTTTGGCTTTCAGTTTTTAATGCCTTCTCGTTGGAATCTTATCAGTCCCTTTCTGAACGAATGATAATTAATGAACTATTATACATCAAGTTACATCACAAGCACTAGAAGAATTGTTAATCGTTTTGGAACTTCCATGTGGAGGATTCGGAGTGGCTGTTGACATTTCTTTTCTTGATTATGTTGAAAAAATCAGCTTTAAGCCTGACC</genome_strand>
        <mrna_strand>CAGGTGACATTGAGCAAAATGTTTGCATTGAGCGCATTGCATAATCTAAATATGAATATTATCACATATTTTAGATTCCATATACGTTGCTATAGAACCTGAGATATTTATGAAAATGATTACATGCTCTAGTGATTGAGCAGTCTTGTCAATTCTAAAAGTTGTATAGGCTCCTTATTTGAGTTGTCATTTCCTAACATGTAATGAATGTTTTTCTGCCTTTCTATGAGCGCTTCAGAGTTTGCTAAAAAAGGATAAAGAGGAGCAAAATGATCCTACAATTGCAAGTTTTCATGAGAGACTAGCCACAGCTTATCAAGATCCAGCACTGCTGCATGTCGGATATTCTGGAAATAATGCAAGTATCATTGCCCCCCTTCTTGGTACTGCTGAAGTTGATGCTTAGGGTGTAATCGAGTTATTGCTTACTGTAATCATGTAACACTTTTAGTTGGCAAACATGTGGGTATGTAGTTTGAGTTCAATCTGCTAGTCTGTATAACTCCAACTTTTTGGTTCAGTACTTTGGATAACTCCACTTTCTAGTTGACACTGTATTAGATAGTCAAAGGTATAACTTTTTACTGTCAAGAGACTTGATCAAGAATCTGCATACCAGAAAGTCCACAACTAACTATAAAGGCCTGATCCTTCAGGAACTTTAATGCCTATTTTTATTCTTATATGGAGGAACTAGAAAAGGTCAAATGTGCATCACCCCAAAGCTACTTGAATTGGTCAATTATTTGCAGTGATCATGAAGTGCAAACAATTGCATTAAAGAGATTCATATTTGTGCCTGACGTCTCCATTTGTGCGTGAGAACTTTTTGGCTTTCAGTTTTTAATGCCTTCTCGTTGGAATCTTATCAGTCCCTTTCTGAACGAATGATAATTAATGAACTATTATACATCAAGTTACATCACAAGCACTAGAAGAATTGTTAATCGTTTTGGAACTTCCATGTGGAGGATTCGGAGTGGCTGTTGACATTTCTTTTCTTGATTATG-TGAAAAAATCAGCTTTAAGCCTGACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U563347" ref_strand="+" ref_description="SGN-U563347 Tomato 200607#2 [2 ESTs aligned] (*GB) gi|157345727|emb|CAO15025.1| (e_value=3e-54) unnamed; (*ATH) AT3G01100.1 (e_value=2e-46)  Symbol: None | early-responsive to dehydration protein-related / ERD protein-related, low similarity to ERD4 protein (early-responsive to dehydration stress) (Arabidopsis thaliana) GI:15375406; contains Pfam profile PF02714: Domain of unknown functi... ; ">
      <seq>gacttcttccttgctcccctaattctgccattcctcttggtttactactgtctggggtatctcatctaccggaaccagctgctgaatgtatatgcacccaagtatgagactggtggaaagttgtggcctatagtacatgattctatgattttctccttgatactgatgcatgttatagccattggaatatttgggctaaagaaacttcctctcgcttcaagcttaacagttcctcttccaatccttactcttgtgttcaacagctattgtaggagacgcttcctacctatgttcaagtcttattcagtcgagagtttgctaaaaaaggataaagaggagcaaaatgatcctacaattgcaagttttcatgagagactagccacagcatatcaagatccagcactgctgcatgtcggatattctggaaataatgcaagtatcattgccccccttcttggtactgctgaagttgatgcttagggtgtaatcgagctattgcttactgtaatcatgtaacacttttagttggcaaacatgtgggtatgtagtttgagttcaatctgctagtctgtataactccaactttttagttcagtactttggataactccactttctagttgacactgtcttggatagtcaaaggtatatttttttactgtcaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="-" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="91538" stop="89033"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="91239" g_stop="91162" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="78" r_length="78" r_score="0.987"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="91161" i_stop="90705" i_length="457">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.973" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="90704" g_stop="90471" g_length="234"/>
          <reference_exon_boundary r_type="cDNA" r_start="79" r_stop="312" r_length="234" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="90470" i_stop="89690" i_length="781">
            <donor d_prob="0.956" d_score="1.00"/>
            <acceptor a_prob="0.518" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="89689" g_stop="89324" g_length="366"/>
          <reference_exon_boundary r_type="cDNA" r_start="313" r_stop="678" r_length="366" r_score="0.959"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="-" ref_id="SGN-U563347" ref_strand="+">
        <total_alignment_score>0.976</total_alignment_score>
        <cumulative_length_of_scored_exons>678</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U563347" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="91239" e_stop="91162"/>
          <exon e_start="90704" e_stop="90471"/>
          <exon e_start="89689" e_stop="89324"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TACTTCTTCCTTGCTCCCCTAATTCTGCCATTCCTCTTGGTTTACTACTGTCTGGGGTATCTCATCTACCGGAACCAGGTTGGTTGCACATTTTTTACATTTTTCTTCTGCTTCCTTGGGATACATAAAAATGACGAATTCTACTTTGTGGTACCCTGCTAACGCAGGATTCTTTGTGCACGGGCTTCCCTTTTTATTTTTTCTTTTCTATTTTCTGGGAACTGGGAAGTATACAGCTGTTGAATTGATCAGTGAGGTTAAAGTAGGATCCTCACTTTTTTAAAAAAAATTGATATGATGATGACATGAATGAGGTTAAAGTGGAGACATATGATAAGTGAGGATTCATATTGCTGAATGTATTTGCTTGGGACTGAAGCATATTTGTTGACTTCTTGTTGATGTTGTCTTCTGACTCTTTTTCAAATTTGATAAATATTGGTTGTTATTTTTGGCTGTTGGAGAGATCCTAGTGAAATATCAAAATTCTGTTGGCTTGCTCTAGTTGGTCATGTTTTATTAATTTTTTGAGCAGCTGCTGAATGTATATGCACCCAAGTATGAGACTGGTGGAAAGTTGTGGCCTATAGTACATGATTCTATGATTTTCTCCTTGATACTGATGCATGTTATAGCCATTGGAATATTTGGGCTAAAGAAACTTCCTCTCGCTTCAAGCTTAACAGTTCCTCTTCCAATCCTTACTCTTGTGTTCAACAGCTATTGTAGGAGACGCTTCCTACCTATGTTCAAGTCTTATTCAGTCGAGGTACATCTGCCTTGTTCTTTACTTGTTTTGTAGCTCGTGGTTTATATAGCTGAACTCATAGAGTTCTCCTCTGCAGATCTTATTAGTCATTAATAAGCACCTAGTGCGGAAGTTGTTTCTTTTCTTTTAGCCATTGTTGATATGATAGTCCTTTTGGGGTTCTTGGAGAATTCAATTGACTTGGCAAACTTTTTGATTTGACAATTGCCCTATTTGGTAACTTTGTGAATCTGAACATAGCTCCCATGCAATTCTTGCAGAATATTGAGAAGCATTTAAACATACTATAAATAGAACTGCTAACCATCTGTTGTCTGGTCTCAGTAACATATATGCAGCAATTTAGAACACAGTTGCTGATAGCTGCACTTAATAAAGGGCGTTATATCTTGCATCCCGTGACTACATTGATGATGCATATTAGTGAACAGTCAAATGTACATTATTTAATGAATGTCTAAGTGACTTGATTGCTTATTTTAATGTAAGTCAAGGAGGATTACTGTGCTTGGCTAGCAAGTCATTGCAACTGTAACACTCGGATAGGTGACATTGAGCAAAATGTTTGCATTGAGCGCATTGCATAATCTAAATATGAATATTATCACATATTTTAGATTCCATATACGTTGCTATAGAACCTGAGATATTTATGAAAATGATTACATGCTCTAGTGATTGAGCAGTCTTGTCAATTCTAAAAGTTGTATAGGCTCCTTATTTGAGTTGTCATTTCCTAACATGTAATGAATGTTTTTCTGCCTTTCTATGAGCGCTTCAGAGTTTGCTAAAAAAGGATAAAGAGGAGCAAAATGATCCTACAATTGCAAGTTTTCATGAGAGACTAGCCACAGCTTATCAAGATCCAGCACTGCTGCATGTCGGATATTCTGGAAATAATGCAAGTATCATTGCCCCCCTTCTTGGTACTGCTGAAGTTGATGCTTAGGGTGTAATCGAGTTATTGCTTACTGTAATCATGTAACACTTTTAGTTGGCAAACATGTGGGTATGTAGTTTGAGTTCAATCTGCTAGTCTGTATAACTCCAACTTTTTGGTTCAGTACTTTGGATAACTCCACTTTCTAGTTGACACTGTATTAGATAGTCAAAGGTATAACTTTTTACTGTCAAGAGACTTGATCAA</genome_strand>
        <mrna_strand>GACTTCTTCCTTGCTCCCCTAATTCTGCCATTCCTCTTGGTTTACTACTGTCTGGGGTATCTCATCTACCGGAACCAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCTGAATGTATATGCACCCAAGTATGAGACTGGTGGAAAGTTGTGGCCTATAGTACATGATTCTATGATTTTCTCCTTGATACTGATGCATGTTATAGCCATTGGAATATTTGGGCTAAAGAAACTTCCTCTCGCTTCAAGCTTAACAGTTCCTCTTCCAATCCTTACTCTTGTGTTCAACAGCTATTGTAGGAGACGCTTCCTACCTATGTTCAAGTCTTATTCAGTCGAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTTGCTAAAAAAGGATAAAGAGGAGCAAAATGATCCTACAATTGCAAGTTTTCATGAGAGACTAGCCACAGCATATCAAGATCCAGCACTGCTGCATGTCGGATATTCTGGAAATAATGCAAGTATCATTGCCCCCCTTCTTGGTACTGCTGAAGTTGATGCTTAGGGTGTAATCGAGCTATTGCTTACTGTAATCATGTAACACTTTTAGTTGGCAAACATGTGGGTATGTAGTTTGAGTTCAATCTGCTAGTCTGTATAACTCCAACTTTTTAGTTCAGTACTTTGGATAACTCCACTTTCTAGTTGACACTGTCTTGGATAGTCAAAGGTATATTTTTTTACTGTCAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U563348" ref_strand="+" ref_description="SGN-U563348 Tomato 200607#2 [4 ESTs aligned] (*GB) gi|157345727|emb|CAO15025.1| (e_value=1e-82) unnamed; (*ATH) AT3G01100.1 (e_value=4e-79)  Symbol: None | early-responsive to dehydration protein-related / ERD protein-related, low similarity to ERD4 protein (early-responsive to dehydration stress) (Arabidopsis thaliana) GI:15375406; contains Pfam profile PF02714: Domain of unknown functi... ; (*SWP) sp|Q09809|YAB9_SCHPO (e_value=2e-11) Uncharacterized membrane protein C2G11.09 OS=Schizosaccharomyces pombe GN=SPAC2G11.09; ">
      <seq>ttacagtgctatttcttatacccgttttaatagtccaagggcttacacatcttgagcagttggaaatctggtttccctttttgaaaggattgcttagaatagcatttgttagccaagtgattaccggatatcttcctagtcttgtacttcaactgtttctctatgttgtgccatccataatgattatgttctcatccatacaaggatacattgctatgagccagatagagaaaagtgcatgcatcaaagttctttggtttactatatggaacattttttttgcaaatgtgctctctggatcggctctctatcgagttgaaatttttcttgagcccaaaaatattcctgccatattagctgtagcagttccaggacaggcaactttctttatcgcctatgtggttacatctggatggaccagcacttcctcagaactttttcagctgtcgacgctcgttttcaattttataaagagaaatatttgtaggaaatatgatgatgagtttgaggtcccttcagttccttaccacagtgaaattcccaggattcttttgtttggcctccttggtataacatacttcttccttgctcccctaattctgccattcctcttggtttactactgtctggggtatctcatctaccggaaccagctattgtaggagacgcttcctacctatgttcaagtcttattcagtcgagagtttgctaaaaaaggataaagaggagcaaaatgatcctacaattgcaagttttcatgagagactagccacagcttatcaagatccagcactgctgcatgtcggatattctggaaataatgcaagtatcattgccccccttcttggtactgctgaagttgatgcttagggtgtaatcgagttattgcttactgtaatcatgtaacacttttagttggcaaacatgtgggtatgtagtttgagttcaatctgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="-" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="93211" stop="89137"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="92911" g_stop="92812" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="100" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="92811" i_stop="92708" i_length="104">
            <donor d_prob="0.415" d_score="1.00"/>
            <acceptor a_prob="0.935" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="92707" g_stop="92431" g_length="277"/>
          <reference_exon_boundary r_type="cDNA" r_start="101" r_stop="377" r_length="277" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="92430" i_stop="91438" i_length="993">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.972" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="91437" g_stop="91162" g_length="276"/>
          <reference_exon_boundary r_type="cDNA" r_start="378" r_stop="653" r_length="276" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="91161" i_stop="90520" i_length="642">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.470" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="90519" g_stop="90471" g_length="49"/>
          <reference_exon_boundary r_type="cDNA" r_start="654" r_stop="702" r_length="49" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="90470" i_stop="89690" i_length="781">
            <donor d_prob="0.956" d_score="1.00"/>
            <acceptor a_prob="0.518" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="89689" g_stop="89437" g_length="253"/>
          <reference_exon_boundary r_type="cDNA" r_start="703" r_stop="955" r_length="253" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="-" ref_id="SGN-U563348" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>955</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U563348" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="92911" e_stop="92812"/>
          <exon e_start="92707" e_stop="92431"/>
          <exon e_start="91437" e_stop="91162"/>
          <exon e_start="90519" e_stop="90471"/>
          <exon e_start="89689" e_stop="89437"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTACAGTGCTATTTCTTATACCCGTTTTAATAGTCCAAGGGCTTACACATCTTGAGCAGTTGGAAATCTGGTTTCCCTTTTTGAAAGGATTGCTTAGAATGTAAGTGGTAACTGAAAACTTTGGGAAGTTTCAGCTTAATGAGCATGTTACTATACTTTCTGATGTCTTTGCATGGTGGTAAAATAAGTTAATGTGCCTTGCAGAGCATTTGTTAGCCAAGTGATTACCGGATATCTTCCTAGTCTTGTACTTCAACTGTTTCTCTATGTTGTGCCATCCATAATGATTATGTTCTCATCCATACAAGGATACATTGCTATGAGCCAGATAGAGAAAAGTGCATGCATCAAAGTTCTTTGGTTTACTATATGGAACATTTTTTTTGCAAATGTGCTCTCTGGATCGGCTCTCTATCGAGTTGAAATTTTTCTTGAGCCCAAAAATATTCCTGCCATATTAGCTGTAGCAGTTCCAGGACAGGTGAGCGTGGTTCAGTTATCATTATGGCAATCATCTTCTTGAAATAGAAGAAGTTTGATCCTTAAATGTGTTTTAGAAGGTTTATACAATATCAACTGTAGCTTAATCTATTGTTTTTGGATAAATTGTTATCAATGTTTGACGGATAAATAAAAAGGAGAATTTTGGGACACAACAAGCTACATTTGCAAGAAAACATGATGAAGAAGTGATTTCATTGCTTATTTTCTCAATTAAGACAACCACGTAATTGCTTTTTGCAAATATCTTTGCAGCACAGACTAGGGTACATTGGCCACCATATCTATTTTCTTGCAATATATAATGTTAAGTCTAATTTTGATTAGGATGCTAAGTAAGAGGGTAGAGTTAACCATTTGATTTTTGGACTATAACTGAAATAATCTTGACCACAGTTTACAGAACACTTGGGGTTAGTGGTGATCTCTGCAGCTGATGTTACAGAAGGATAATTTAGCTAAGACGAGAAATGGTAAAATGATATTTGAAGACTAAAGTGAATAGGTGCTCCACTCTTGTGGAATATTCTTGCAAAAATCTCTCTTAAGTGAACTTTTATTTTAAGCATTTTCCTACCGAACTCACGAGAAAGTTCCTTTTTTATTGTGATAAATGGTTACTATTAAGAACTAAACATGTTGGTAGGATAGCTAATGTTACCTCTTTTAGCATTTTGCATGGATATGTCTATGGCTTTGACTTCGTAAAAAAAAAAAGATCGACGGCTTTATGTGATTAGTTGAGTCACTAGAATCATTTGATGTTTTCAAATGAAATATTGTAGAATGCAACCGGAAGGCAGAGATCTATGACATCTAATTTTATGTGGAATATGGATCTGATATGCCTGTTTAAGTACTGTTTGTTATACTAAATAACACTAATGAGAAAAGTTCAAATGTTTGATTGATACGTACTTATTGAATAATCAACAGTTACTACTAGAGAACTGAGTTCCTATTCGTCTTGCAGGCAACTTTCTTTATCGCCTATGTGGTTACATCTGGATGGACCAGCACTTCCTCAGAACTTTTTCAGCTGTCGACGCTCGTTTTCAATTTTATAAAGAGAAATATTTGTAGGAAATATGATGATGAGTTTGAGGTCCCTTCAGTTCCTTACCACAGTGAAATTCCCAGGATTCTTTTGTTTGGCCTCCTTGGTATAACATACTTCTTCCTTGCTCCCCTAATTCTGCCATTCCTCTTGGTTTACTACTGTCTGGGGTATCTCATCTACCGGAACCAGGTTGGTTGCACATTTTTTACATTTTTCTTCTGCTTCCTTGGGATACATAAAAATGACGAATTCTACTTTGTGGTACCCTGCTAACGCAGGATTCTTTGTGCACGGGCTTCCCTTTTTATTTTTTCTTTTCTATTTTCTGGGAACTGGGAAGTATACAGCTGTTGAATTGATCAGTGAGGTTAAAGTAGGATCCTCACTTTTTTAAAAAAAATTGATATGATGATGACATGAATGAGGTTAAAGTGGAGACATATGATAAGTGAGGATTCATATTGCTGAATGTATTTGCTTGGGACTGAAGCATATTTGTTGACTTCTTGTTGATGTTGTCTTCTGACTCTTTTTCAAATTTGATAAATATTGGTTGTTATTTTTGGCTGTTGGAGAGATCCTAGTGAAATATCAAAATTCTGTTGGCTTGCTCTAGTTGGTCATGTTTTATTAATTTTTTGAGCAGCTGCTGAATGTATATGCACCCAAGTATGAGACTGGTGGAAAGTTGTGGCCTATAGTACATGATTCTATGATTTTCTCCTTGATACTGATGCATGTTATAGCCATTGGAATATTTGGGCTAAAGAAACTTCCTCTCGCTTCAAGCTTAACAGTTCCTCTTCCAATCCTTACTCTTGTGTTCAACAGCTATTGTAGGAGACGCTTCCTACCTATGTTCAAGTCTTATTCAGTCGAGGTACATCTGCCTTGTTCTTTACTTGTTTTGTAGCTCGTGGTTTATATAGCTGAACTCATAGAGTTCTCCTCTGCAGATCTTATTAGTCATTAATAAGCACCTAGTGCGGAAGTTGTTTCTTTTCTTTTAGCCATTGTTGATATGATAGTCCTTTTGGGGTTCTTGGAGAATTCAATTGACTTGGCAAACTTTTTGATTTGACAATTGCCCTATTTGGTAACTTTGTGAATCTGAACATAGCTCCCATGCAATTCTTGCAGAATATTGAGAAGCATTTAAACATACTATAAATAGAACTGCTAACCATCTGTTGTCTGGTCTCAGTAACATATATGCAGCAATTTAGAACACAGTTGCTGATAGCTGCACTTAATAAAGGGCGTTATATCTTGCATCCCGTGACTACATTGATGATGCATATTAGTGAACAGTCAAATGTACATTATTTAATGAATGTCTAAGTGACTTGATTGCTTATTTTAATGTAAGTCAAGGAGGATTACTGTGCTTGGCTAGCAAGTCATTGCAACTGTAACACTCGGATAGGTGACATTGAGCAAAATGTTTGCATTGAGCGCATTGCATAATCTAAATATGAATATTATCACATATTTTAGATTCCATATACGTTGCTATAGAACCTGAGATATTTATGAAAATGATTACATGCTCTAGTGATTGAGCAGTCTTGTCAATTCTAAAAGTTGTATAGGCTCCTTATTTGAGTTGTCATTTCCTAACATGTAATGAATGTTTTTCTGCCTTTCTATGAGCGCTTCAGAGTTTGCTAAAAAAGGATAAAGAGGAGCAAAATGATCCTACAATTGCAAGTTTTCATGAGAGACTAGCCACAGCTTATCAAGATCCAGCACTGCTGCATGTCGGATATTCTGGAAATAATGCAAGTATCATTGCCCCCCTTCTTGGTACTGCTGAAGTTGATGCTTAGGGTGTAATCGAGTTATTGCTTACTGTAATCATGTAACACTTTTAGTTGGCAAACATGTGGGTATGTAGTTTGAGTTCAATCTGCT</genome_strand>
        <mrna_strand>TTACAGTGCTATTTCTTATACCCGTTTTAATAGTCCAAGGGCTTACACATCTTGAGCAGTTGGAAATCTGGTTTCCCTTTTTGAAAGGATTGCTTAGAAT........................................................................................................AGCATTTGTTAGCCAAGTGATTACCGGATATCTTCCTAGTCTTGTACTTCAACTGTTTCTCTATGTTGTGCCATCCATAATGATTATGTTCTCATCCATACAAGGATACATTGCTATGAGCCAGATAGAGAAAAGTGCATGCATCAAAGTTCTTTGGTTTACTATATGGAACATTTTTTTTGCAAATGTGCTCTCTGGATCGGCTCTCTATCGAGTTGAAATTTTTCTTGAGCCCAAAAATATTCCTGCCATATTAGCTGTAGCAGTTCCAGGACAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACTTTCTTTATCGCCTATGTGGTTACATCTGGATGGACCAGCACTTCCTCAGAACTTTTTCAGCTGTCGACGCTCGTTTTCAATTTTATAAAGAGAAATATTTGTAGGAAATATGATGATGAGTTTGAGGTCCCTTCAGTTCCTTACCACAGTGAAATTCCCAGGATTCTTTTGTTTGGCCTCCTTGGTATAACATACTTCTTCCTTGCTCCCCTAATTCTGCCATTCCTCTTGGTTTACTACTGTCTGGGGTATCTCATCTACCGGAACCAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATTGTAGGAGACGCTTCCTACCTATGTTCAAGTCTTATTCAGTCGAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTTGCTAAAAAAGGATAAAGAGGAGCAAAATGATCCTACAATTGCAAGTTTTCATGAGAGACTAGCCACAGCTTATCAAGATCCAGCACTGCTGCATGTCGGATATTCTGGAAATAATGCAAGTATCATTGCCCCCCTTCTTGGTACTGCTGAAGTTGATGCTTAGGGTGTAATCGAGTTATTGCTTACTGTAATCATGTAACACTTTTAGTTGGCAAACATGTGGGTATGTAGTTTGAGTTCAATCTGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U588339" ref_strand="+" ref_description="SGN-U588339 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|157345727|emb|CAO15025.1| (e_value=3e-30) unnamed; (*ATH) AT3G01100.2 (e_value=3e-31)  Symbol: None | similar to early-responsive to dehydration protein-related / ERD protein-related [Arabidopsis thaliana] (TAIR:At1g69450.1); similar to expressed protein (with alternative splicing) [Oryza sativa (japonica cultivar-group)] (GB:XP_46924... ; ">
      <seq>gctgcctttgtatctttccggacacgttttgccgcagcttcagctacacacatgcagcaaggtgtaaatcctacacaatgggtcactgagccagctcctgatccagaggatgtgtattggcctttcttttcagcatcatttctaaagagatggattagcaacctggtggttgttgtggcatgcgtcctccttacagtgctatttcttatacccgttttaatagtccaagggcttacacatcttgagcagttggaaatctggtttccctttttgaaaggattgcttagaatgcaactttctttatcgcctatgtggttacatctggatggaccagcacttcctcagaactttttcagctgtcgacgctcgttttcaattttataaagagaaatatttgtaggaaatatgatgatgagtttgaggtcccttcagttccttaccacagtgaaattcccaggattcttttgtttggcctccttggtataacatacttcttccttgctcccctaattctgccattcctcttggtttactactgtctggggtatctcatctaccggaaccaggttggttgcacattttttacatttttcttctgcttccttgggatacataaaaatgacgaattctacttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="-" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="93401" stop="90793"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="93101" g_stop="92812" g_length="290"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="290" r_length="290" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="92811" i_stop="91438" i_length="1374">
            <donor d_prob="0.415" d_score="1.00"/>
            <acceptor a_prob="0.972" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="91437" g_stop="91093" g_length="345"/>
          <reference_exon_boundary r_type="cDNA" r_start="291" r_stop="635" r_length="345" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="-" ref_id="SGN-U588339" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>635</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U588339" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="93101" e_stop="92812"/>
          <exon e_start="91437" e_stop="91093"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTGCCTTTGTATCTTTCCGGACACGTTTTGCCGCAGCTTCAGCTACACACATGCAGCAAGGTGTAAATCCTACACAATGGGTCACTGAGCCAGCTCCTGATCCAGAGGATGTGTATTGGCCTTTCTTTTCAGCATCATTTCTAAAGAGATGGATTAGCAACCTGGTGGTTGTTGTGGCATGCGTCCTCCTTACAGTGCTATTTCTTATACCCGTTTTAATAGTCCAAGGGCTTACACATCTTGAGCAGTTGGAAATCTGGTTTCCCTTTTTGAAAGGATTGCTTAGAATGTAAGTGGTAACTGAAAACTTTGGGAAGTTTCAGCTTAATGAGCATGTTACTATACTTTCTGATGTCTTTGCATGGTGGTAAAATAAGTTAATGTGCCTTGCAGAGCATTTGTTAGCCAAGTGATTACCGGATATCTTCCTAGTCTTGTACTTCAACTGTTTCTCTATGTTGTGCCATCCATAATGATTATGTTCTCATCCATACAAGGATACATTGCTATGAGCCAGATAGAGAAAAGTGCATGCATCAAAGTTCTTTGGTTTACTATATGGAACATTTTTTTTGCAAATGTGCTCTCTGGATCGGCTCTCTATCGAGTTGAAATTTTTCTTGAGCCCAAAAATATTCCTGCCATATTAGCTGTAGCAGTTCCAGGACAGGTGAGCGTGGTTCAGTTATCATTATGGCAATCATCTTCTTGAAATAGAAGAAGTTTGATCCTTAAATGTGTTTTAGAAGGTTTATACAATATCAACTGTAGCTTAATCTATTGTTTTTGGATAAATTGTTATCAATGTTTGACGGATAAATAAAAAGGAGAATTTTGGGACACAACAAGCTACATTTGCAAGAAAACATGATGAAGAAGTGATTTCATTGCTTATTTTCTCAATTAAGACAACCACGTAATTGCTTTTTGCAAATATCTTTGCAGCACAGACTAGGGTACATTGGCCACCATATCTATTTTCTTGCAATATATAATGTTAAGTCTAATTTTGATTAGGATGCTAAGTAAGAGGGTAGAGTTAACCATTTGATTTTTGGACTATAACTGAAATAATCTTGACCACAGTTTACAGAACACTTGGGGTTAGTGGTGATCTCTGCAGCTGATGTTACAGAAGGATAATTTAGCTAAGACGAGAAATGGTAAAATGATATTTGAAGACTAAAGTGAATAGGTGCTCCACTCTTGTGGAATATTCTTGCAAAAATCTCTCTTAAGTGAACTTTTATTTTAAGCATTTTCCTACCGAACTCACGAGAAAGTTCCTTTTTTATTGTGATAAATGGTTACTATTAAGAACTAAACATGTTGGTAGGATAGCTAATGTTACCTCTTTTAGCATTTTGCATGGATATGTCTATGGCTTTGACTTCGTAAAAAAAAAAAGATCGACGGCTTTATGTGATTAGTTGAGTCACTAGAATCATTTGATGTTTTCAAATGAAATATTGTAGAATGCAACCGGAAGGCAGAGATCTATGACATCTAATTTTATGTGGAATATGGATCTGATATGCCTGTTTAAGTACTGTTTGTTATACTAAATAACACTAATGAGAAAAGTTCAAATGTTTGATTGATACGTACTTATTGAATAATCAACAGTTACTACTAGAGAACTGAGTTCCTATTCGTCTTGCAGGCAACTTTCTTTATCGCCTATGTGGTTACATCTGGATGGACCAGCACTTCCTCAGAACTTTTTCAGCTGTCGACGCTCGTTTTCAATTTTATAAAGAGAAATATTTGTAGGAAATATGATGATGAGTTTGAGGTCCCTTCAGTTCCTTACCACAGTGAAATTCCCAGGATTCTTTTGTTTGGCCTCCTTGGTATAACATACTTCTTCCTTGCTCCCCTAATTCTGCCATTCCTCTTGGTTTACTACTGTCTGGGGTATCTCATCTACCGGAACCAGGTTGGTTGCACATTTTTTACATTTTTCTTCTGCTTCCTTGGGATACATAAAAATGACGAATTCTACTTT</genome_strand>
        <mrna_strand>GCTGCCTTTGTATCTTTCCGGACACGTTTTGCCGCAGCTTCAGCTACACACATGCAGCAAGGTGTAAATCCTACACAATGGGTCACTGAGCCAGCTCCTGATCCAGAGGATGTGTATTGGCCTTTCTTTTCAGCATCATTTCTAAAGAGATGGATTAGCAACCTGGTGGTTGTTGTGGCATGCGTCCTCCTTACAGTGCTATTTCTTATACCCGTTTTAATAGTCCAAGGGCTTACACATCTTGAGCAGTTGGAAATCTGGTTTCCCTTTTTGAAAGGATTGCTTAGAAT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACTTTCTTTATCGCCTATGTGGTTACATCTGGATGGACCAGCACTTCCTCAGAACTTTTTCAGCTGTCGACGCTCGTTTTCAATTTTATAAAGAGAAATATTTGTAGGAAATATGATGATGAGTTTGAGGTCCCTTCAGTTCCTTACCACAGTGAAATTCCCAGGATTCTTTTGTTTGGCCTCCTTGGTATAACATACTTCTTCCTTGCTCCCCTAATTCTGCCATTCCTCTTGGTTTACTACTGTCTGGGGTATCTCATCTACCGGAACCAGGTTGGTTGCACATTTTTTACATTTTTCTTCTGCTTCCTTGGGATACATAAAAATGACGAATTCTACTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U574517" ref_strand="+" ref_description="SGN-U574517 Tomato 200607#2 [5 ESTs aligned] (*GB) gi|157345727|emb|CAO15025.1| (e_value=4e-79) unnamed; (*ATH) AT3G01100.2 (e_value=5e-77)  Symbol: None | similar to early-responsive to dehydration protein-related / ERD protein-related [Arabidopsis thaliana] (TAIR:At1g69450.1); similar to expressed protein (with alternative splicing) [Oryza sativa (japonica cultivar-group)] (GB:XP_46924... ; ">
      <seq>ggaaaagcatagcatagtggaaaaaatagtttacttaaaactccactgcaactcttttcgtcccttttcttcgtagtaaagtaaaggtttgacctttggatctctcgtctctatctatcttcttcattaggattagggctacaaaggtcgtatcttctgttgaagctgcgataatctgcattcacgagtgtttattatctgtgctattcgtattctggtgctgttgatttgaagagctcatgttgtaagcaaacagttcagtgaaaggatttaaggaatgatcctctcagcacttttgacttctgttggaataaatcttggactttgttttctgttcttcacattgtattctatattgagaaagcagccaggaaatgcagaagtttatgcaccacgcttggttgctgaggggagatctcagcaaatcagtaatttcaatttggagagacttttgccatcagctggttgggtgacaagagcatggcgaccctcagaagcagagctcttagccaactcaggcttggatgctgttgttttcatgcgcatttttatattcagtgctaaagtttttacctttgctgtcattgtggggattttcattcttctgcctatcaattacatggggaatcaactaagtcttgatttgtttgacttgcccaataagtctctggaatcattcactatctcaaatgttgacgacggatcaaacaggttatggatccatttctcagctgtgtatattttcacagcagttgtttgctatcttctttacnttgagtatgactatatttcatcaaagagagtttcatatttttgttcatcaaaacctcatccacatcnattcaccattttagttcgaagtattccagcttcatcnnnaanaanttacagtgaannagttgaaagttttttct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="-" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="98741" stop="94341"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="98441" g_stop="98277" g_length="165"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="165" r_length="165" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="98276" i_stop="97716" i_length="561">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.808" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="97715" g_stop="97323" g_length="393"/>
          <reference_exon_boundary r_type="cDNA" r_start="166" r_stop="558" r_length="393" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="97322" i_stop="95984" i_length="1339">
            <donor d_prob="0.675" d_score="1.00"/>
            <acceptor a_prob="0.654" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="95983" g_stop="95831" g_length="153"/>
          <reference_exon_boundary r_type="cDNA" r_start="559" r_stop="711" r_length="153" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="95830" i_stop="94930" i_length="901">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="94929" g_stop="94866" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="712" r_stop="775" r_length="64" r_score="0.984"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="94865" i_stop="94780" i_length="86">
            <donor d_prob="0.630" d_score="0.98"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="94779" g_stop="94641" g_length="139"/>
          <reference_exon_boundary r_type="cDNA" r_start="776" r_stop="914" r_length="139" r_score="0.942"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="-" ref_id="SGN-U574517" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>914</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U574517" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="98441" e_stop="98277"/>
          <exon e_start="97715" e_stop="97323"/>
          <exon e_start="95983" e_stop="95831"/>
          <exon e_start="94929" e_stop="94866"/>
          <exon e_start="94779" e_stop="94641"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAAAAGCATAGCATAGTGGAAAAAATAGTTTACTTAAAACTCCACTGCAACTCTTTTCGTCCCTTTTCTTCGTAGTAAAGTAAAGGTTTGACCTTTGGATCTCTCGTCTCTATCTATCTTCTTCATTAGGATTAGGGCTACAAAGGTCGTATCTTCTGTTGAAGGTAATTAATCATCATTCATCACTTACTTGTACTTGTTTTGTTTTCAATATGTTTACATATCCACTCTAATTAACAAAAATAACTTTATTAAGGAAGTGGAAGATTTCTTCATGGAAAATCGTAACTCCTCTCTAAGTAATGATGCAAAATTTGCAATAATTCGATTATCTTCAATTTACGGAAGAAACAAGAATTGACAGAGGAGAAATGATTTCCAGACTAATGTGTGTGTCTGTATGTGCAAGGAAGGAGAAACCTTTTTATGTCTGTTTACTTACTTTACCTTCCTCTCTTGTGTTCTGGAGCTTCGTAGCCATCATCCGATGACTGAGAAACTACCACTATATCCCAGCCAAATCCATATTACCCTCTTATAGCTAATTTTACAGCTAATGACAACTTAAACTACAAATTAGTTAGCTTTTTTATTTAGCTGTTGGACTTATAACCAGCTTTATTCATGTCATTTCATCTACAAGTTGTATTCCAGTTGCTTCCTTGTCATACTGATCTGTTAAGACAATTTTGAGTTACCAATCTTGATTGTTCATAGTTTTGCAGCTGCGATAATCTGCATTCACGAGTGTTTATTATCTGTGCTATTCGTATTCTGGTGCTGTTGATTTGAAGAGCTCATGTTGTAAGCAAACAGTTCAGTGAAAGGATTTAAGGAATGATCCTCTCAGCACTTTTGACTTCTGTTGGAATAAATCTTGGACTTTGTTTTCTGTTCTTCACATTGTATTCTATATTGAGAAAGCAGCCAGGAAATGCAGAAGTTTATGCACCACGCTTGGTTGCTGAGGGGAGATCTCAGCAAATCAGTAATTTCAATTTGGAGAGACTTTTGCCATCAGCTGGTTGGGTGACAAGAGCATGGCGACCCTCAGAAGCAGAGCTCTTAGCCAACTCAGGCTTGGATGCTGTTGTTTTCATGCGCATTTTTATATTCAGGTTACTTAAGCACTGTTATGCGATGAAGGCTTGACGAGAATTTTATGTTTATTATAGCTTCTGTGCCGAACTTCACACCTTATGTTTATTCCCAGTGAGTGACATTTGCATTTTATTTCCAGGATTTGCCTTAACTAGATTAATTGTTCAATAATAAACCTGCCAGTTGTAAGAATGAGAACATATGAATGGTGCAATACACCTCTGATTTTGCTCGATGGAAATGTTTGGTGTATTACCCTAAAGTTGACATTTGGGTCTATGATGACTGTCCGTGTTATTCTTCCACCTTCACCAAAAACGTTGAGGATGTCAAAGTGATCTTTTATCCTTACCATTGTAGTTCTATGGTGCAGCATATGTTATAGCAACAATTCTGCTGAGTTGTTGGCAACTTATACTCGTTACTAAAGAGACTAGGTGTTGACTAATATTGCTTGTGTCGCAGAGACAAGGTATTGGCTAGTGTGAGAAATAACTGAAGAGATTAGGAAAATGCTTTACTTGATTACTTTATGATTAATATGGAGTTGAAGATACACCTATTTATCAGTATGAAATATACAATATATCTTCACCATGAGATAAAATATAAATCACCAACTTAGCACTTCTAACACTACCACTGGAAATTTTAACACGCCCTTCAAACTTGAGTTTGCTTACTATGGAAACATGGGAGCAAGTAGTCAACAGAAAGTGCTGATTACTTTTGTCAAAAAAATTGCCAGAAAAGTAGCTGAAAAAGTTGTTTGTTGGAATCTGGCCAAAAGGAAAGCAGTAACCCTGAAGAGATTTTTTTTTGCTGGCTGACGACAACCTGTCCAGTTTTGGGAGCATAGCTGCTGGGGAGGTTAACTAAAATGAAAGCAGTAAACTTTGAAAAGAAAAAATATATATTGCTGGTAGGAAGTCCCGGTCTAAAGCCTCCCTCTGGTAAGCCAAAACACTATTTAAATTTCCACCAAGTTCATAAATGCTTTTATTGCCCTGTGAGAAATAAGAGGTAATCAGAAGAATGTGTAGCCTGACTAGTTTGGTAAGAAGATGCATCTATCTAAAGGCGATATTTTAGGTCAATATCAGACACTATCGAACTTGATAACTTAACACTTCTAACTCCTTATTTTGAAGATAAGAAGAAAACAACAAGTCTACACCTCTAACATTGTAAAACTAACATTAAACTACAAGTTCAAAAGGGAGTTAGCGTTGAAGAAGTTTTCAGTATTCATTCAAAATCAGAACGCTGAATTTTGTACCTTAATCTGGATCCTTACTATTTTTTACTGTTCATGTTCATTGTCTTGAGCTAATCTGGTTTCCCTTATCTCAACAGTGCTAAAGTTTTTACCTTTGCTGTCATTGTGGGGATTTTCATTCTTCTGCCTATCAATTACATGGGGAATCAACTAAGTCTTGATTTGTTTGACTTGCCCAATAAGTCTCTGGAATCATTCACTATCTCAAATGTTGACGACGGATCAAACAGGTAAACTGAAGACCTCCTACTCAAAATTTATTCAACTATGATGTCAATAGTTTTTCTCACTACAAGAATCTATACATGGTCAAAAGTAAAATTGACCTTTGGCTATATGAAATTGGATCACATTCTTGTCTCTCCATGAAACTGAAATCGGCTACCAGTCTTAGTCTTTCTCAATTTGTACTGGTCTTCTCTTTTTTGGTGAAGCCATAGATTTGGTAATGAAGTGTCTATATCGGGATCTCAGATTAAAAAAAATCTTTGATATTATGCTGCTCAAATAGTGGTGTGACAGCATCTGGTCTGTCGGATCCTTGATGCATATTTCAACAAGAAGCACATTGTTATCATTCCAACAATCGAAATTATATGGAGAACAACTATGCAAAAGCCTCTTATACCTTTTCATTGACATGTGCGTATAATTCAGTTTATCTTTGACTAGAATTTATGGTAGCCTTGATACTTGTTCATATATTTTTATTTCTCAATTTGGATATCTTCTACGACTTATGTATTGTCTTGTTAAATCGTATTTTATCTTTCTCTTTCAGCTCTGCTAATGATAGCAGATTGCATGTAATAAATTACATACATCCTAAAGTTTCTCAGCCAGTCACTAGTTATCCCAGACACTAGAAACTATTTGATATTTATCTGCAGAATGTTCAAAGTGGGTCCCTAAAAGAAGAACATTGTTATCATAGTTTTCAGTAACAGCTCCACACCTAAGATTCTGCATCTTATACATCAACGCATTATGGAGTGAATGTCTTGAAGTAGTTGTATCTATAAATCATTACCAATGATACTTGAGAACGGATCATGTAATGCATTGGCAAGATACATTGATATTGGTAGTTGGCACTAAAATCTGAGAGAGTTATTTGTTTTGTCTTTCAAGGTTATGGATCCATTTCTCAGCTGTGTATATTTTCACAGCAGTTGTTTGCTATCTTCTTTACATTGTAAGTGATTGGACGCATCTTTTGTTTTGTTTCTTCTTCATCCTTGCTAAACTTCAACTTACAGTGAGATACCACCTTATTTCCAGGAGTATGACTATATTTCATCAAAGAGAGTTTCATATTTTTGTTCATCAAAACCTCATCCACATCAATTCACCATTTTAGTTCGAAGTATTCCAGCTTCATCAGGAAGAAGTTACAGTGAAACAGTTGAAAGTTTTTTCT</genome_strand>
        <mrna_strand>GGAAAAGCATAGCATAGTGGAAAAAATAGTTTACTTAAAACTCCACTGCAACTCTTTTCGTCCCTTTTCTTCGTAGTAAAGTAAAGGTTTGACCTTTGGATCTCTCGTCTCTATCTATCTTCTTCATTAGGATTAGGGCTACAAAGGTCGTATCTTCTGTTGAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCGATAATCTGCATTCACGAGTGTTTATTATCTGTGCTATTCGTATTCTGGTGCTGTTGATTTGAAGAGCTCATGTTGTAAGCAAACAGTTCAGTGAAAGGATTTAAGGAATGATCCTCTCAGCACTTTTGACTTCTGTTGGAATAAATCTTGGACTTTGTTTTCTGTTCTTCACATTGTATTCTATATTGAGAAAGCAGCCAGGAAATGCAGAAGTTTATGCACCACGCTTGGTTGCTGAGGGGAGATCTCAGCAAATCAGTAATTTCAATTTGGAGAGACTTTTGCCATCAGCTGGTTGGGTGACAAGAGCATGGCGACCCTCAGAAGCAGAGCTCTTAGCCAACTCAGGCTTGGATGCTGTTGTTTTCATGCGCATTTTTATATTCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTAAAGTTTTTACCTTTGCTGTCATTGTGGGGATTTTCATTCTTCTGCCTATCAATTACATGGGGAATCAACTAAGTCTTGATTTGTTTGACTTGCCCAATAAGTCTCTGGAATCATTCACTATCTCAAATGTTGACGACGGATCAAACAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTATGGATCCATTTCTCAGCTGTGTATATTTTCACAGCAGTTGTTTGCTATCTTCTTTACNTT......................................................................................GAGTATGACTATATTTCATCAAAGAGAGTTTCATATTTTTGTTCATCAAAACCTCATCCACATCNATTCACCATTTTAGTTCGAAGTATTCCAGCTTCATCNNNAANAANTTACAGTGAANNAGTTGAAAGTTTTTTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U589073" ref_strand="+" ref_description="SGN-U589073 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>tatagtttacttaaaaactccactgcaactcttttcgtcccttttcttcatagtaaagtaaaggtttgacctttggatctctcatctctatctatcttcttcattaggattagggctacaaagttcgtatcttctgtttaaggtaattaatcatcattcatcacttactagtacttgttttgttttcaatatgtttcaattacacatatccactctaattaacaaaaataacttaacaaggaagtggaagatttcttcatggaaaatcgtaactcctctctaagtaatgatgcaaaatttgcaataattcgattatcttcaatttacggaagaaacaagaattgacagaggagaaatgatttccagactaatgtgtgtgtctgtatgtgcaaggaaggagaaacctttttatgtctgtttacttactttaccttcctcccttatgttctggagcttcgtagccatcatccgatgactgagaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="-" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="98716" stop="97643"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="98417" g_stop="97943" g_length="475"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="482" r_length="482" r_score="0.943"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="-" ref_id="SGN-U589073" ref_strand="+">
        <total_alignment_score>0.943</total_alignment_score>
        <cumulative_length_of_scored_exons>475</cumulative_length_of_scored_exons>
        <coverage percentage="0.985" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U589073" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="98417" e_stop="97943"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATAGTTTACTTA-AAACTCCACTGCAACTCTTTTCGTCCCTTTTCTTCGTAGTAAAGTAAAGGTTTGACCTTTGGATCTCTCGTCTCTATCTATCTTCTTCATTAGGATTAGGGCTACAAAGGTCGTATCTTCTGTTGAAGGTAATTAATCATCATTCATCACTTACTTGTACTTGTTTTGTTTTCAATATG--T---TT--ACATATCCACTCTAATTAACAAAAATAACTTTATTAAGGAAGTGGAAGATTTCTTCATGGAAAATCGTAACTCCTCTCTAAGTAATGATGCAAAATTTGCAATAATTCGATTATCTTCAATTTACGGAAGAAACAAGAATTGACAGAGGAGAAATGATTTCCAGACTAATGTGTGTGTCTGTATGTGCAAGGAAGGAGAAACCTTTTTATGTCTGTTTACTTACTTTACCTTCCTCTCTTGTGTTCTGGAGCTTCGTAGCCATCATCCGATGACTGAGAA</genome_strand>
        <mrna_strand>TATAGTTTACTTAAAAACTCCACTGCAACTCTTTTCGTCCCTTTTCTTCATAGTAAAGTAAAGGTTTGACCTTTGGATCTCTCATCTCTATCTATCTTCTTCATTAGGATTAGGGCTACAAAGTTCGTATCTTCTGTTTAAGGTAATTAATCATCATTCATCACTTACTAGTACTTGTTTTGTTTTCAATATGTTTCAATTACACATATCCACTCTAATTAACAAAAATAAC-TTAACAAGGAAGTGGAAGATTTCTTCATGGAAAATCGTAACTCCTCTCTAAGTAATGATGCAAAATTTGCAATAATTCGATTATCTTCAATTTACGGAAGAAACAAGAATTGACAGAGGAGAAATGATTTCCAGACTAATGTGTGTGTCTGTATGTGCAAGGAAGGAGAAACCTTTTTATGTCTGTTTACTTACTTTACCTTCCTCCCTTATGTTCTGGAGCTTCGTAGCCATCATCCGATGACTGAGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U594091" ref_strand="+" ref_description="SGN-U594091 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>tcaagctggatgtagccctctctcagagggaagtgttctagtctcacctagttaaaacacatactgaagattcatgtggttgacaacgcttcatttggtgaaactgacattctttatccttgaccatcattagcatggtgggaggatacattgtgcagctgagaacgtgtcaggcgttaggcgaaatacgttcattgaagcacaagcttcaacctgctggagcaaagatggtttctgatttacaagttgtgatctccattctgaatgctatatggtgctttactgttaacagagccttgttggctttcgggggaagaatagggagggttgcctcgtgcaattttgagcttctatagcggttactgcacttttaagtttgataacttagttgttaccatttttgctgtacaatattgacttgactacagattagcgattgatatatgatggtatgaaaggttactgttagttgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="+" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="104980" stop="106053"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="105280" g_stop="105753" g_length="474"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="474" r_length="474" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="+" ref_id="SGN-U594091" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>474</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U594091" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="105280" e_stop="105753"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAAGCTGGATGTAGCCCTCTCTCAGAGGGAAGTGTTCTAGTCTCACCTAGTTAAAACACATACTGAAGATTCATGTGGTTGACAACGCTTCATTTGGTGAAACTGACATTCTTTATCCTTGACCATCATTAGCATGGTGGGAGGATACATTGTGCAGCTGAGAACGTGTCAGGCGTTAGGCGAAATACGTTCATTGAAGCACAAGCTTCAACCTGCTGGAGCAAAGATGGTTTCTGATTTACAAGTTGTGATCTCCATTCTGAATGCTATATGGTGCTTTACTGTTAACAGAGCCTTGTTGGCTTTCGGGGGAAGAATAGGGAGGGTTGCCTCGTGCAATTTTGAGCTTCTATAGCGGTTACTGCACTTTTAAGTTTGATAACTTAGTTGTTACCATTTTTGCTGTACAATATTGACTTGACTACAGATTAGCGATTGATATATGATGGTATGAAAGGTTACTGTTAGTTGAT</genome_strand>
        <mrna_strand>TCAAGCTGGATGTAGCCCTCTCTCAGAGGGAAGTGTTCTAGTCTCACCTAGTTAAAACACATACTGAAGATTCATGTGGTTGACAACGCTTCATTTGGTGAAACTGACATTCTTTATCCTTGACCATCATTAGCATGGTGGGAGGATACATTGTGCAGCTGAGAACGTGTCAGGCGTTAGGCGAAATACGTTCATTGAAGCACAAGCTTCAACCTGCTGGAGCAAAGATGGTTTCTGATTTACAAGTTGTGATCTCCATTCTGAATGCTATATGGTGCTTTACTGTTAACAGAGCCTTGTTGGCTTTCGGGGGAAGAATAGGGAGGGTTGCCTCGTGCAATTTTGAGCTTCTATAGCGGTTACTGCACTTTTAAGTTTGATAACTTAGTTGTTACCATTTTTGCTGTACAATATTGACTTGACTACAGATTAGCGATTGATATATGATGGTATGAAAGGTTACTGTTAGTTGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U594092" ref_strand="+" ref_description="SGN-U594092 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>tactgaatgattcttgtggctgaccacgcttcatttggggaaactgacattctttatccttgaccatccttatcatggtgggaggatacattgtgcagctgataacttgtcaagcgttctgccaaatactttctttgaagctctagcttcaagctgctggagcatatatggtttctgatttacaagttgcgatctccattctgaatgctatatggtgctttactgttaacagagccttgttggctttcgggggaagaatagggagggttgcctcgntgcaattttgagcttctatagcggttactgcacttttaagtttgataacttagttgttaccatttttgctgtacaatattgacttgactacagattagcgattgatatatgatggtatgaaaggttactgttagttgatacattttggtttctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="+" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="105041" stop="106067"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="105341" g_stop="105767" g_length="427"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="430" r_length="430" r_score="0.939"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="+" ref_id="SGN-U594092" ref_strand="+">
        <total_alignment_score>0.939</total_alignment_score>
        <cumulative_length_of_scored_exons>427</cumulative_length_of_scored_exons>
        <coverage percentage="0.993" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U594092" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="105341" e_stop="105767"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TACTGAA-GATTCATGTGGTTGACAACGCTTCATTTGGTGAAACTGACATTCTTTATCCTTGACCATCATTAGCATGGTGGGAGGATACATTGTGCAGCTGAGAACGTGTCAGGCGTTAGGCGAAATACGTTCATTGAAGCACAAGCTTCAACCTGCTGGAGCAAAGATGGTTTCTGATTTACAAGTTGTGATCTCCATTCTGAATGCTATATGGTGCTTTACTGTTAACAGAGCCTTGTTGGCTTTCGGGGGAAGAATAGGGAGGGTTGCCTCG-TGCAATTTTGAGCTTCTATAGCGGTTACTGCACTTTTAAGTTTGATAACTTAGTTGTTACCATTTTTGCTGTACAATATTGACTTGACTACAGATTAGCGATTGATATATGATGGTATGAAAGGTTACTGTTAGTTGATACA-TTTGGTTTCTT</genome_strand>
        <mrna_strand>TACTGAATGATTCTTGTGGCTGACCACGCTTCATTTGGGGAAACTGACATTCTTTATCCTTGACCATCCTTATCATGGTGGGAGGATACATTGTGCAGCTGATAACTTGTCAAGCGTTCTGCCAAATACTTTCTTTGAAGCTCTAGCTTCAAGCTGCTGGAGCATATATGGTTTCTGATTTACAAGTTGCGATCTCCATTCTGAATGCTATATGGTGCTTTACTGTTAACAGAGCCTTGTTGGCTTTCGGGGGAAGAATAGGGAGGGTTGCCTCGNTGCAATTTTGAGCTTCTATAGCGGTTACTGCACTTTTAAGTTTGATAACTTAGTTGTTACCATTTTTGCTGTACAATATTGACTTGACTACAGATTAGCGATTGATATATGATGGTATGAAAGGTTACTGTTAGTTGATACATTTTGGTTTCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U575690" ref_strand="+" ref_description="SGN-U575690 Tomato 200607#2 [8 ESTs aligned] ">
      <seq>gaaaaggctcagagagcagtgtcatagtttgacaccgtcgtcatcgtatcatctccgccatcttctccgccatccaccgccgtttgtctccgccattcaccgttgacataggcatccagcaattatgaagcggaagaggcaatctaaaataacagatttgaacttcgatgtgttaaagcacgttatgtatcatgttgctgtgtcacctgatggagctggaaatcttgcccgaactttatcagtgtaagtatcgtttccgatatctctttcttgtttatgtttcttaattctagataacttttgaccttatttaccgtgacttctatgtcctttcctattcttttgatgtgattaactactctttctgttattaactttgaaattgagttcctgtcaaagctgacgtatcatctatgtgtatcaacttctgccttgtatatgacccaacatatgtcctatggctgtctacaatttcgtgttttacaacatcaaaaggggtccagtaaaagactgttcaaggaacttgctgatgattctgacatcttaaaagccgcggcgtttgatcaagttaacctttctggtattcatgaatcattctggcgacctgctgggatgttatgtaggtgcttaccaacaggaaatccaactgctttcaacacaataagaaagaatgcagagatattgaatgtttcttatgagattctcaagagggacatgttccgtggaaaaatgattcttttggtaagaagcacagctcttgaaattgcaaataccagggcaaggatgtggtataatgcatgtacaaccaggactgctcaagtacttgtgatgccgttgatgctcaaatcgaaactattgagcagtttttagaaatgttgaaggctgtattgaaagtaatgagaagtcagattgctcaatgaggttgagctgatgcctagctttttgatgccgcatgagcgttttgtgttaaaacatcttcaaagacgaggactcagacaaaattgaagttcagcatttggggctttaaatatgggttactaagcttgctgagtggttaaaatcctcttgtcgttattgtcagtgagatggtggcagttatatcaaacataagtgtcacttgtaacttgccaatttttgtgcgctctgtgtatctttgtttctaccgtttttcttttaacatattatggtgtcagactgaaatatctcagttcagagtgtatgtaaatctatttgcaaacacttccatctttgcgtagatgtgatcgatggatgataaagccttataatgtgga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="-" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="108753" stop="105926"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108448" g_stop="108059" g_length="390"/>
          <reference_exon_boundary r_type="cDNA" r_start="120" r_stop="509" r_length="390" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108058" i_stop="107985" i_length="74">
            <donor d_prob="0.342" d_score="1.00"/>
            <acceptor a_prob="0.409" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="107984" g_stop="107825" g_length="160"/>
          <reference_exon_boundary r_type="cDNA" r_start="510" r_stop="669" r_length="160" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="107824" i_stop="107692" i_length="133">
            <donor d_prob="0.875" d_score="1.00"/>
            <acceptor a_prob="0.008" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="107691" g_stop="107629" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="670" r_stop="732" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="107628" i_stop="106888" i_length="741">
            <donor d_prob="0.562" d_score="1.00"/>
            <acceptor a_prob="0.950" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="106887" g_stop="106843" g_length="45"/>
          <reference_exon_boundary r_type="cDNA" r_start="733" r_stop="777" r_length="45" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="106842" i_stop="106741" i_length="102">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="106740" g_stop="106226" g_length="515"/>
          <reference_exon_boundary r_type="cDNA" r_start="778" r_stop="1292" r_length="515" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="-" ref_id="SGN-U575690" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>1173</cumulative_length_of_scored_exons>
        <coverage percentage="0.908" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U575690" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108448" e_stop="108059"/>
          <exon e_start="107984" e_stop="107825"/>
          <exon e_start="107691" e_stop="107629"/>
          <exon e_start="106887" e_stop="106843"/>
          <exon e_start="106740" e_stop="106226"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAATTATGAAGCGGAAGAGGCAATCTAAAATAACAGATTTGAACTTCGATGTGTTAAAGCACGTTATGTATCATGTTGCTGTGTCACCTGATGGAGCTGGAAATCTTGCCCGAACTTTATCAGTGTAAGTATCGTTTCCGATATCTCTTTCTTGTTTATGTTTCTTAATTCTAGATAACTTTTGACCTTATTTACCGTGACTTCTATGTCCTTTCCTATTCTTTTGATGTGATTAACTACTCTTTCTGTTATTAACTTTGAAATTGAGTTCCTGTCAAAGCTGACGTATCATCTATGTGTATCAACTTCTGCCTTGTATATGACCCAACATATGTCCTATGGCTGTCTACAATTTCGTGTTTTACAACATCAAAAGGGGTCCAGTAAAAGGTGTCTGCATATCTCTTGTGGTTATCTTGCAGATTATGCTGCTTCTGATCCTGATTTCCTCATCACAGCTGCAGACTGTTCAAGGAACTTGCTGATGATTCTGACATCTTAAAAGCCGCGGCGTTTGATCAAGTTAACCTTTCTGGTATTCATGAATCATTCTGGCGACCTGCTGGGATGTTATGTAGGTGCTTACCAACAGGAAATCCAACTGCTTTCAACACAATAAGAAAGGTACAGAACTCCTGTTTTGGGCATATCAGAAAGTTCTATCAGTGTTGTGCAATGCCCTTAGTAGCTTCAGGTCACTTCTCTTTTACATGGTTGCATTTCTGCTAGGATTATTGCTAAAAAGCCTGTATTGCAGAATGCAGAGATATTGAATGTTTCTTATGAGATTCTCAAGAGGGACATGTTCCGTGGAAAAATGGTATTAATATTTAATTCTTCTTGTTGACGACATTTAGGGATGGCAATGGGGCAGGGTGGGTGCAGGGTGGAGCGGGTTTAAGCCTATGCTGGGTACATGATTGCGGGTGTGGGGAGGGTTGAAATATATATATTTAATTCTTAGTGGGGCGGTGCGGGTGCAGGTTGAAATGATTTTTTAAGTCATGTTAAATAGATTTTTCAACACATGCTAAATACGAAACTGAATTGCCTTTTCTTTCTATTTACAATAACTGTTAATATTTGAAAAGACTAAGTTTTATCTAAACCATGTTATAATCCTAGTTTAGATGTTGAATTTCTTTTTGTTATAAAGACAACAAAAGCGCCTCCTTTGGTCACTTATACACCTAGAATTTCTGAGACTTACAATACTACGGTAATTATACATAATAATATTATAGTATATAAAAATCCAATCTATATTAGTATATGTATACTTGTGTAATTATGCATCATAACATGAGTTCAAAACATGCTTAGTAGAATTTTTGAGACTTGCAGACACAAAAAAAACAGCTAATGCGGAGCGGGATTATATGGGGCGGGTTGAAAATAGTAGATCAGTGTATGTGGGGAGGGGTAGGGCGGGTTAAGGTCTTTGCGGGGCTTATGCGGGTTTGCCCCGCAACTGTTCCACCCATTGCCATCCCTATCGACATTTATACCAGTCACCCATTTAATTTCTTTGATTTAGGCTGACAATAATGTTGACCTGCAGATTCTTTTGGTAAGAAGCACAGCTCTTGAAATTGCAAATACCAGGGCAAGGAAGAAGGCTTTTGCAGCTGCCATAGATGTTAGTATTTTGACTTTAATATTGTTAAATTGAATTTATAAAATGACATCAACTTCTAATTTCTCTGCATGAAACTTGTGGTATAATGCATGTACAACCAGGACTGCTCAAGTACTTGTGATGCCGTTGATGCTCAAATCGAAACTATTGAGCAGTTTTTAGAAATGTTGAAGGCTGTATTGAAAGTAATGAGAAGTCAGATTGCTCAATGAGGTTGAGCTGATGCCTAGCTTTTTGATGCCGCATGAGCGTTTTGTGTTAAAACATCTTCAAAGACGAGGACTCAGACAAAATTGAAGTTCAGCATTTGGGGCTTTAAATATGGGTTACTAAGCTTGCTGAGTGGTTAAAATCCTCTTGTCGTTATTGTCAGTGAGATGGTGGCAGTTATATCAAACATAAGTGTCACTTGTAACTTGCCAATTTTTGTGCGCTCTGTGTATCTTTGTTTCTACCGTTTTTCTTTTAACATATTATGGTGTCAGACTGAAATATCTCAGTTCAGAGTGTATGTAAATCTATTTGCAAACACTTCCATCTTTGCGTAGATGTGATCGATGGATGATAAAGCCTTATAATGTGGA</genome_strand>
        <mrna_strand>CAATTATGAAGCGGAAGAGGCAATCTAAAATAACAGATTTGAACTTCGATGTGTTAAAGCACGTTATGTATCATGTTGCTGTGTCACCTGATGGAGCTGGAAATCTTGCCCGAACTTTATCAGTGTAAGTATCGTTTCCGATATCTCTTTCTTGTTTATGTTTCTTAATTCTAGATAACTTTTGACCTTATTTACCGTGACTTCTATGTCCTTTCCTATTCTTTTGATGTGATTAACTACTCTTTCTGTTATTAACTTTGAAATTGAGTTCCTGTCAAAGCTGACGTATCATCTATGTGTATCAACTTCTGCCTTGTATATGACCCAACATATGTCCTATGGCTGTCTACAATTTCGTGTTTTACAACATCAAAAGGGGTCCAGTAAAAG..........................................................................ACTGTTCAAGGAACTTGCTGATGATTCTGACATCTTAAAAGCCGCGGCGTTTGATCAAGTTAACCTTTCTGGTATTCATGAATCATTCTGGCGACCTGCTGGGATGTTATGTAGGTGCTTACCAACAGGAAATCCAACTGCTTTCAACACAATAAGAAAG.....................................................................................................................................AATGCAGAGATATTGAATGTTTCTTATGAGATTCTCAAGAGGGACATGTTCCGTGGAAAAATG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCTTTTGGTAAGAAGCACAGCTCTTGAAATTGCAAATACCAGG......................................................................................................GCAAGGATGTGGTATAATGCATGTACAACCAGGACTGCTCAAGTACTTGTGATGCCGTTGATGCTCAAATCGAAACTATTGAGCAGTTTTTAGAAATGTTGAAGGCTGTATTGAAAGTAATGAGAAGTCAGATTGCTCAATGAGGTTGAGCTGATGCCTAGCTTTTTGATGCCGCATGAGCGTTTTGTGTTAAAACATCTTCAAAGACGAGGACTCAGACAAAATTGAAGTTCAGCATTTGGGGCTTTAAATATGGGTTACTAAGCTTGCTGAGTGGTTAAAATCCTCTTGTCGTTATTGTCAGTGAGATGGTGGCAGTTATATCAAACATAAGTGTCACTTGTAACTTGCCAATTTTTGTGCGCTCTGTGTATCTTTGTTTCTACCGTTTTTCTTTTAACATATTATGGTGTCAGACTGAAATATCTCAGTTCAGAGTGTATGTAAATCTATTTGCAAACACTTCCATCTTTGCGTAGATGTGATCGATGGATGATAAAGCCTTATAATGTGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>24</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="+" PGL_start="18599" PGL_stop="18832"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="18599" e_stop="18832"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.983"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.983">
            <gDNA_exon_boundary e_start="18599" e_stop="18832" e_length="234"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18599" stop="18832"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U600611" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGGGGTAAGACGTGAAGTTCATATGAAATGTTAGGTGGCTTGATTGAGGGAGTAATTCTTGGTTAGACGAATCTATAAAAAAAAATATAATGTGTAATTAAAACATTATGAATGAACCATGAAATTTCCCTAAGAATTAATGTTAAACTTGATGAAAAAGTGAAGAAAAATCGTAGAATAAATTTCCAGAACTTGAAAACAGACTTTAAAAGAATCTGGAAATTTTTGAACATC</gDNA_template>
            <first_frame> W  G  K  T  *  S  S  Y  E  M  L  G  G  L  I  E  G  V  I  L  G  *  T  N  L  *  K  K  I  *  C  V  I  K  T  L  *  M  N  H  E  I  S  L  R  I  N  V  K  L  D  E  K  V  K  K  N  R  R  I  N  F  Q  N  L  K  T  D  F  K  R  I  W  K  F  L  N  I </first_frame>
            <second_frame>  G  V  R  R  E  V  H  M  K  C  *  V  A  *  L  R  E  *  F  L  V  R  R  I  Y  K  K  K  Y  N  V  *  L  K  H  Y  E  *  T  M  K  F  P  *  E  L  M  L  N  L  M  K  K  *  R  K  I  V  E  *  I  S  R  T  *  K  Q  T  L  K  E  S  G  N  F  *  T   </second_frame>
            <third_frame>   G  *  D  V  K  F  I  *  N  V  R  W  L  D  *  G  S  N  S  W  L  D  E  S  I  K  K  N  I  M  C  N  *  N  I  M  N  E  P  *  N  F  P  K  N  *  C  *  T  *  *  K  S  E  E  K  S  *  N  K  F  P  E  L  E  N  R  L  *  K  N  L  E  I  F  E  H  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02SLm0042B19.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="+" PGL_start="27273" PGL_stop="27506"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="27273" e_stop="27506"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.983"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.983">
            <gDNA_exon_boundary e_start="27273" e_stop="27506" e_length="234"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="27273" stop="27506"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U600611" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGGGGTAAGACGTGAAGTTCATATGAAATGTTAGGTGGCTTGATTGAGGGAGTAATTCTTGGTTAGACGAATCTATAAAAAAAAATATAATGTGTAATTAAAACATTATGAATGAACCATGAAATTTCCCTAAGAATTAATGTTAAACTTGATGAAAAAGTGAAGAAAAATCGTAGAATAAATTTCCAGAACTTGAAAACAGACTTTAAAAGAATCTGGAAATTTTTGAACATC</gDNA_template>
            <first_frame> W  G  K  T  *  S  S  Y  E  M  L  G  G  L  I  E  G  V  I  L  G  *  T  N  L  *  K  K  I  *  C  V  I  K  T  L  *  M  N  H  E  I  S  L  R  I  N  V  K  L  D  E  K  V  K  K  N  R  R  I  N  F  Q  N  L  K  T  D  F  K  R  I  W  K  F  L  N  I </first_frame>
            <second_frame>  G  V  R  R  E  V  H  M  K  C  *  V  A  *  L  R  E  *  F  L  V  R  R  I  Y  K  K  K  Y  N  V  *  L  K  H  Y  E  *  T  M  K  F  P  *  E  L  M  L  N  L  M  K  K  *  R  K  I  V  E  *  I  S  R  T  *  K  Q  T  L  K  E  S  G  N  F  *  T   </second_frame>
            <third_frame>   G  *  D  V  K  F  I  *  N  V  R  W  L  D  *  G  S  N  S  W  L  D  E  S  I  K  K  N  I  M  C  N  *  N  I  M  N  E  P  *  N  F  P  K  N  *  C  *  T  *  *  K  S  E  E  K  S  *  N  K  F  P  E  L  E  N  R  L  *  K  N  L  E  I  F  E  H  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02SLm0042B19.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="+" PGL_start="45312" PGL_stop="46085"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="45312" e_stop="45565"/>
            <exon e_start="45667" e_stop="45784"/>
            <exon e_start="45864" e_stop="45900"/>
            <exon e_start="46000" e_stop="46085"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.769" acc_prob="0.412" e_score="0.996"/>
          <exon-intron don_prob="0.668" acc_prob="0.966" e_score="0.992"/>
          <exon-intron don_prob="0.730" acc_prob="0.945" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.996">
            <gDNA_exon_boundary e_start="45312" e_stop="45565" e_length="254"/>
          </exon>
          <intron i_serial="1" don_prob="0.769" acc_prob="0.412">
            <gDNA_intron_boundary i_start="45566" i_stop="45666" i_length="101"/>
          </intron>
          <exon e_serial="2" e_score="0.992">
            <gDNA_exon_boundary e_start="45667" e_stop="45784" e_length="118"/>
          </exon>
          <intron i_serial="2" don_prob="0.668" acc_prob="0.966">
            <gDNA_intron_boundary i_start="45785" i_stop="45863" i_length="79"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="45864" e_stop="45900" e_length="37"/>
          </exon>
          <intron i_serial="3" don_prob="0.730" acc_prob="0.945">
            <gDNA_intron_boundary i_start="45901" i_stop="45999" i_length="99"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="46000" e_stop="46085" e_length="86"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="45312" stop="45565"/>
              <exon start="45667" stop="45784"/>
              <exon start="45864" stop="45900"/>
              <exon start="46000" stop="46085"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U589947" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CCTCAAACACAAACAAGTAAAAAATTTGATTTACATACTTCACTTCTAAAGCTATACTCTGATCTTATTGATCTTTTGGTTTGTATATATAATCCTGAAGCCCAAACAAGGTCTTGCATTCTTTGACCCTTGTGCATCCCAGTGTCCCCTTCAAAATTGTTGATATTGAAAGGTCCATATTTGATACACCAGTTAACTCTGGTTTTTATGATGTTGTATATTTGCATGCAGTGAGGATGACCTGCTTTGCCCAG : AATACATCTCTGGTGGGGTTCATCTGAGTTCCCTTAACAAATTGAGTGCAAACAATTGTTCATTCAAGCTTTCAGGATACATCTCAGGTCCTGATGTTTACCCAGTGGAAGTATACAA : TGTGGTGACGGACTGACGGTTTATTTTCAGTCGAAAG : GCCAAGTATGAAATGAAACTTGTTAACATTTGGAATAGCAAATTACAAGCTCAAGGGGAGTGCACAAGTACACGTGATGGGAAGTC</gDNA_template>
            <first_frame> P  Q  T  Q  T  S  K  K  F  D  L  H  T  S  L  L  K  L  Y  S  D  L  I  D  L  L  V  C  I  Y  N  P  E  A  Q  T  R  S  C  I  L  *  P  L  C  I  P  V  S  P  S  K  L  L  I  L  K  G  P  Y  L  I  H  Q  L  T  L  V  F  M  M  L  Y  I  C  M  Q  *  G  *  P  A  L  P  R :   I  H  L  W  W  G  S  S  E  F  P  *  Q  I  E  C  K  Q  L  F  I  Q  A  F  R  I  H  L  R  S  *  C  L  P  S  G  S  I  Q  :  C  G  D  G  L  T  V  Y  F  Q  S  K   : G  Q  V  *  N  E  T  C  *  H  L  E  *  Q  I  T  S  S  R  G  V  H  K  Y  T  *  W  E  V </first_frame>
            <second_frame>  L  K  H  K  Q  V  K  N  L  I  Y  I  L  H  F  *  S  Y  T  L  I  L  L  I  F  W  F  V  Y  I  I  L  K  P  K  Q  G  L  A  F  F  D  P  C  A  S  Q  C  P  L  Q  N  C  *  Y  *  K  V  H  I  *  Y  T  S  *  L  W  F  L  *  C  C  I  F  A  C  S  E  D  D  L  L  C  P   : E  Y  I  S  G  G  V  H  L  S  S  L  N  K  L  S  A  N  N  C  S  F  K  L  S  G  Y  I  S  G  P  D  V  Y  P  V  E  V  Y  N :   V  V  T  D  *  R  F  I  F  S  R  K  :  A  K  Y  E  M  K  L  V  N  I  W  N  S  K  L  Q  A  Q  G  E  C  T  S  T  R  D  G  K   </second_frame>
            <third_frame>   S  N  T  N  K  *  K  I  *  F  T  Y  F  T  S  K  A  I  L  *  S  Y  *  S  F  G  L  Y  I  *  S  *  S  P  N  K  V  L  H  S  L  T  L  V  H  P  S  V  P  F  K  I  V  D  I  E  R  S  I  F  D  T  P  V  N  S  G  F  Y  D  V  V  Y  L  H  A  V  R  M  T  C  F  A  Q  :  N  T  S  L  V  G  F  I  *  V  P  L  T  N  *  V  Q  T  I  V  H  S  S  F  Q  D  T  S  Q  V  L  M  F  T  Q  W  K  Y  T   : M  W  *  R  T  D  G  L  F  S  V  E  R :   P  S  M  K  *  N  L  L  T  F  G  I  A  N  Y  K  L  K  G  S  A  Q  V  H  V  M  G  S  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02SLm0042B19.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="+" PGL_start="48684" PGL_stop="51471"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="48684" e_stop="48930"/>
            <exon e_start="50729" e_stop="51471"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.994" acc_prob="0.854" e_score="1.000"/>
          <exon-only e_score="0.980"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="48684" e_stop="48930" e_length="247"/>
          </exon>
          <intron i_serial="1" don_prob="0.994" acc_prob="0.854">
            <gDNA_intron_boundary i_start="48931" i_stop="50728" i_length="1798"/>
          </intron>
          <exon e_serial="2" e_score="0.980">
            <gDNA_exon_boundary e_start="50729" e_stop="51471" e_length="743"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="48684" stop="48930"/>
              <exon start="50729" stop="51471"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U586153" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAGAAGGAAGAGCTTAGCTAAGAACTCTAGAGGTTGCGAGAAGATATTATTGTAGCAATGGAGGCGGTGAGAAGGAGGAGCTTTGGTTGGCCGACAATGGCGGTGGTGCTAACATGCGCTTTGCTCGTGATGCTGCCTCAAGTGTACTCGATTCGGTACATTGTGGGATCGAGATTCGGGTGGACTAACAGTGTCAATTACACCAATTGGGCTAAGGACAAACATTTCTACAACGGAGACTGGCTCT : TTTTTGTGTATGACAGGAACCAGATGAATGTGCTTGAGCTAAACAAGACAGACTACGAGAGCTGCAATACTGATCATCCTCTCCACAATTGGACTACTGGAGCAGGAAGGGACGTTGTTCCGCTTAATGTGACTAAAACCTACTATTTCGCTAGTGGAAAAGGATACTGTTATGGAGGCATGAAAGTGGCTATTCATGTTGAAAAGGCACCTCCACCTCCAAAAGCTGCTCCAGTACGCAGCAGTTCAACAAATTTGCTCAACTCATTTAAAGCACAGATAATGATACCAGCTCTTTTCGCAACCGCTGCTGTGTGGGATGCATTTCTTCTGCTCTGGTAGGATGGTTAAGTGAACCATACATGCTGGATGCTTCAGATAATTAGTTAAACCAAGTGTCAAGAAAGTGTTTAGATTTATTTTTTGTGTGCTTGTATTTTCTTTTTTCTTGAAAGTTACCATCTTTTTTTTTTTTTACCACCAAGTGCCATTATCATTTGACCTGAAAATCAATTTTTTATTTCAGATCAAATTGGTGTGTGGGGGTTGATCTGAAAAATTTGTTTATTTATGTTGTTACCTAAACAAGTTTACAATTGTTTCATTGGAGAAATTGATTGCGTGGATCACGGAGACCTTTCATGTTACTCTTTTCATTTGTTATACCTCTCTTAATTACTTATTGTTGTATGTTAGCTGTCTCGATTTGACTTTGGAGAGTTGCAGTATATTCCAAGTTTATGC</gDNA_template>
            <first_frame> K  K  E  E  L  S  *  E  L  *  R  L  R  E  D  I  I  V  A  M  E  A  V  R  R  R  S  F  G  W  P  T  M  A  V  V  L  T  C  A  L  L  V  M  L  P  Q  V  Y  S  I  R  Y  I  V  G  S  R  F  G  W  T  N  S  V  N  Y  T  N  W  A  K  D  K  H  F  Y  N  G  D  W  L   : F  F  V  Y  D  R  N  Q  M  N  V  L  E  L  N  K  T  D  Y  E  S  C  N  T  D  H  P  L  H  N  W  T  T  G  A  G  R  D  V  V  P  L  N  V  T  K  T  Y  Y  F  A  S  G  K  G  Y  C  Y  G  G  M  K  V  A  I  H  V  E  K  A  P  P  P  P  K  A  A  P  V  R  S  S  S  T  N  L  L  N  S  F  K  A  Q  I  M  I  P  A  L  F  A  T  A  A  V  W  D  A  F  L  L  L  W  *  D  G  *  V  N  H  T  C  W  M  L  Q  I  I  S  *  T  K  C  Q  E  S  V  *  I  Y  F  L  C  A  C  I  F  F  F  L  E  S  Y  H  L  F  F  F  L  P  P  S  A  I  I  I  *  P  E  N  Q  F  F  I  S  D  Q  I  G  V  W  G  L  I  *  K  I  C  L  F  M  L  L  P  K  Q  V  Y  N  C  F  I  G  E  I  D  C  V  D  H  G  D  L  S  C  Y  S  F  H  L  L  Y  L  S  *  L  L  I  V  V  C  *  L  S  R  F  D  F  G  E  L  Q  Y  I  P  S  L  C </first_frame>
            <second_frame>  R  R  K  S  L  A  K  N  S  R  G  C  E  K  I  L  L  *  Q  W  R  R  *  E  G  G  A  L  V  G  R  Q  W  R  W  C  *  H  A  L  C  S  *  C  C  L  K  C  T  R  F  G  T  L  W  D  R  D  S  G  G  L  T  V  S  I  T  P  I  G  L  R  T  N  I  S  T  T  E  T  G  S  :  F  L  C  M  T  G  T  R  *  M  C  L  S  *  T  R  Q  T  T  R  A  A  I  L  I  I  L  S  T  I  G  L  L  E  Q  E  G  T  L  F  R  L  M  *  L  K  P  T  I  S  L  V  E  K  D  T  V  M  E  A  *  K  W  L  F  M  L  K  R  H  L  H  L  Q  K  L  L  Q  Y  A  A  V  Q  Q  I  C  S  T  H  L  K  H  R  *  *  Y  Q  L  F  S  Q  P  L  L  C  G  M  H  F  F  C  S  G  R  M  V  K  *  T  I  H  A  G  C  F  R  *  L  V  K  P  S  V  K  K  V  F  R  F  I  F  C  V  L  V  F  S  F  F  L  K  V  T  I  F  F  F  F  Y  H  Q  V  P  L  S  F  D  L  K  I  N  F  L  F  Q  I  K  L  V  C  G  G  *  S  E  K  F  V  Y  L  C  C  Y  L  N  K  F  T  I  V  S  L  E  K  L  I  A  W  I  T  E  T  F  H  V  T  L  F  I  C  Y  T  S  L  N  Y  L  L  L  Y  V  S  C  L  D  L  T  L  E  S  C  S  I  F  Q  V  Y   </second_frame>
            <third_frame>   E  G  R  A  *  L  R  T  L  E  V  A  R  R  Y  Y  C  S  N  G  G  G  E  K  E  E  L  W  L  A  D  N  G  G  G  A  N  M  R  F  A  R  D  A  A  S  S  V  L  D  S  V  H  C  G  I  E  I  R  V  D  *  Q  C  Q  L  H  Q  L  G  *  G  Q  T  F  L  Q  R  R  L  A  L :   F  C  V  *  Q  E  P  D  E  C  A  *  A  K  Q  D  R  L  R  E  L  Q  Y  *  S  S  S  P  Q  L  D  Y  W  S  R  K  G  R  C  S  A  *  C  D  *  N  L  L  F  R  *  W  K  R  I  L  L  W  R  H  E  S  G  Y  S  C  *  K  G  T  S  T  S  K  S  C  S  S  T  Q  Q  F  N  K  F  A  Q  L  I  *  S  T  D  N  D  T  S  S  F  R  N  R  C  C  V  G  C  I  S  S  A  L  V  G  W  L  S  E  P  Y  M  L  D  A  S  D  N  *  L  N  Q  V  S  R  K  C  L  D  L  F  F  V  C  L  Y  F  L  F  S  *  K  L  P  S  F  F  F  F  T  T  K  C  H  Y  H  L  T  *  K  S  I  F  Y  F  R  S  N  W  C  V  G  V  D  L  K  N  L  F  I  Y  V  V  T  *  T  S  L  Q  L  F  H  W  R  N  *  L  R  G  S  R  R  P  F  M  L  L  F  S  F  V  I  P  L  L  I  T  Y  C  C  M  L  A  V  S  I  *  L  W  R  V  A  V  Y  S  K  F  M  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0042B19.2" strand="+"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="48714" stop="48930"/>
                    <exon start="50729" stop="51069"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>555</number_coding_nucleotides>
                  <number_encoded_amino_acids>185</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RLREDIIVAMEAVRRRSFGWPTMAVVLTCALLVMLPQVYSIRYIVGSRFGWTNSVNYTNWAKDKHFYNGDWLFFVYDRNQMNVLELNKTDYESCNTDHPLHNWTTGAGRDVVPLNVTKTYYFASGKGYCYGGMKVAIHVEKAPPPPKAAPVRSSSTNLLNSFKAQIMIPALFATAAVWDAFLLLW*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0042B19.2" strand="+"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="51278" stop="51469"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>192</number_coding_nucleotides>
                  <number_encoded_amino_acids>64</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SEKFVYLCCYLNKFTIVSLEKLIAWITETFHVTLFICYTSLNYLLLYVSCLDLTLESCSIFQVY</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="+" PGL_start="59409" PGL_stop="63059"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="59409" e_stop="59724"/>
            <exon e_start="59915" e_stop="60009"/>
            <exon e_start="60744" e_stop="60861"/>
            <exon e_start="60993" e_stop="61111"/>
            <exon e_start="61790" e_stop="61976"/>
            <exon e_start="62108" e_stop="62251"/>
            <exon e_start="62633" e_stop="63059"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.196" acc_prob="0.971" e_score="0.994"/>
          <exon-intron don_prob="0.978" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.442" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.762" e_score="1.000"/>
          <exon-intron don_prob="0.869" acc_prob="0.974" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.281" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.994">
            <gDNA_exon_boundary e_start="59409" e_stop="59724" e_length="316"/>
          </exon>
          <intron i_serial="1" don_prob="0.196" acc_prob="0.971">
            <gDNA_intron_boundary i_start="59725" i_stop="59914" i_length="190"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="59915" e_stop="60009" e_length="95"/>
          </exon>
          <intron i_serial="2" don_prob="0.978" acc_prob="0.000">
            <gDNA_intron_boundary i_start="60010" i_stop="60743" i_length="734"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="60744" e_stop="60861" e_length="118"/>
          </exon>
          <intron i_serial="3" don_prob="0.994" acc_prob="0.442">
            <gDNA_intron_boundary i_start="60862" i_stop="60992" i_length="131"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="60993" e_stop="61111" e_length="119"/>
          </exon>
          <intron i_serial="4" don_prob="0.997" acc_prob="0.762">
            <gDNA_intron_boundary i_start="61112" i_stop="61789" i_length="678"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="61790" e_stop="61976" e_length="187"/>
          </exon>
          <intron i_serial="5" don_prob="0.869" acc_prob="0.974">
            <gDNA_intron_boundary i_start="61977" i_stop="62107" i_length="131"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="62108" e_stop="62251" e_length="144"/>
          </exon>
          <intron i_serial="6" don_prob="1.000" acc_prob="0.281">
            <gDNA_intron_boundary i_start="62252" i_stop="62632" i_length="381"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="62633" e_stop="63059" e_length="427"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59409" stop="59724"/>
              <exon start="59915" stop="60009"/>
              <exon start="60744" stop="60861"/>
              <exon start="60993" stop="61111"/>
              <exon start="61790" stop="61976"/>
              <exon start="62108" stop="62251"/>
              <exon start="62633" stop="63059"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U582167" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTGGGTACTAACAGGAAGAAGCGTCCCAATTCCATCCGCCATGGCAACGGCGCCAGCCATTTTTGTGCCTTCCACTTCTCTCGCTTCCTCCAATGCACGCAAGATTAATCTAAGTTCATGGAACGAGAAACTGGTTATACCCCAAAATTTTCCATTCTGGACTCCCAAGTACCAGTCTAGGAAACCACCGTCATGCTCCGGTACCAATGTCACGGTGGTCCAAGGTGATCGGAATACAACCGAACTACCAATGAGTATTGACGCTCTTGACAGTTTCATTCGCCTTAATTTGGGAAACTGGACCGGCTCTTTCCAT : CAATTTGATGGTCATGGAAATTTGATGCATAGAATTACAACGAAACTTGCTGTGGGCTCTTATGGTGAAGGTGAACTGATGAGTTTATTACAAAC : GTTATACATCAAACAACCTCCATCTACCACTTCATGTTCTGGCGATGATTGTGAGTCAGAGTGGTTTGAGTACAAAATCAAAGAGACCAACATGTTTACCGTCGACAAATATCAACAG : ATTGGCTTCTTCCCCAAGGAAAAGGCATACGCACTAAGATATCAGACTGCTGGCATGTTGGAGACTGTGTTAAGACAGGGAGTGCTAGGTGAAGATGATATCGGAGAAGAATCACCAAG : AAATCTGAAGCTTCCCTCTAAACGTCCTTCTATTGTATGTGAAAATTGTCTTTATTCACTGGAGAAAGATAGGCGAGTGAGAGCATTTCATATAATGGACCCAAAAGGAGTACTGGAAATGCTTCTTGTTTTCCTTGAAGAAAGAGGGAACGGAGAGGCCATTCCTCCCTCCTTTGACGATTTCAAG : GAGGATACTGAAAGAATTCTGCCTCATCTTGGAACTTGGAAAGGTCATTCGCGAACAACACGTACTGGTGTTTATGGAGCAACAATTACTGAAGCAAGTACAACTGCTGTTCTTGAAATCAACAAGGACGGCCAGCTAATTCAG : GATATCACGTCTACTTCTGGTGCGACTAATATTACAACAAATGTACATTGGACCGGTACCATATCCAATAACCTAGTGACATTCGACGGTGGTTTCCAGCTTACTCTGTTGCCTGGGGGCATTTACATGGGATACCCATCTGATGTGGCCAAGAATGTGCAAGAATCCACAGCATTTCACGTTGAGTTTTGTTGGCTAGAATCGCCTGGCAAGAGACAAAGACTTATCCGTACTTACGATGTAGAGGGCTTTGCTGTTTCATCTACTTATTTCATCGAGTCCAAGGTCTGAGTTATTTCCCCTGATTCAAAAAGATGTGCTTCAGACATCATATTTGCTCCCGCATGAACCATTTTTCCTGGGTACAATCACCAACACTGTAGTATCAATTGTATCTATCTATCTATATATCTGTTTTTATATATAG</gDNA_template>
            <first_frame> V  G  T  N  R  K  K  R  P  N  S  I  R  H  G  N  G  A  S  H  F  C  A  F  H  F  S  R  F  L  Q  C  T  Q  D  *  S  K  F  M  E  R  E  T  G  Y  T  P  K  F  S  I  L  D  S  Q  V  P  V  *  E  T  T  V  M  L  R  Y  Q  C  H  G  G  P  R  *  S  E  Y  N  R  T  T  N  E  Y  *  R  S  *  Q  F  H  S  P  *  F  G  K  L  D  R  L  F  P   : S  I  *  W  S  W  K  F  D  A  *  N  Y  N  E  T  C  C  G  L  L  W  *  R  *  T  D  E  F  I  T  N  :  V  I  H  Q  T  T  S  I  Y  H  F  M  F  W  R  *  L  *  V  R  V  V  *  V  Q  N  Q  R  D  Q  H  V  Y  R  R  Q  I  S  T   : D  W  L  L  P  Q  G  K  G  I  R  T  K  I  S  D  C  W  H  V  G  D  C  V  K  T  G  S  A  R  *  R  *  Y  R  R  R  I  T  K  :  K  S  E  A  S  L  *  T  S  F  Y  C  M  *  K  L  S  L  F  T  G  E  R  *  A  S  E  S  I  S  Y  N  G  P  K  R  S  T  G  N  A  S  C  F  P  *  R  K  R  E  R  R  G  H  S  S  L  L  *  R  F  Q   : G  G  Y  *  K  N  S  A  S  S  W  N  L  E  R  S  F  A  N  N  T  Y  W  C  L  W  S  N  N  Y  *  S  K  Y  N  C  C  S  *  N  Q  Q  G  R  P  A  N  S   : G  Y  H  V  Y  F  W  C  D  *  Y  Y  N  K  C  T  L  D  R  Y  H  I  Q  *  P  S  D  I  R  R  W  F  P  A  Y  S  V  A  W  G  H  L  H  G  I  P  I  *  C  G  Q  E  C  A  R  I  H  S  I  S  R  *  V  L  L  A  R  I  A  W  Q  E  T  K  T  Y  P  Y  L  R  C  R  G  L  C  C  F  I  Y  L  F  H  R  V  Q  G  L  S  Y  F  P  *  F  K  K  M  C  F  R  H  H  I  C  S  R  M  N  H  F  S  W  V  Q  S  P  T  L  *  Y  Q  L  Y  L  S  I  Y  I  S  V  F  I  Y   </first_frame>
            <second_frame>  W  V  L  T  G  R  S  V  P  I  P  S  A  M  A  T  A  P  A  I  F  V  P  S  T  S  L  A  S  S  N  A  R  K  I  N  L  S  S  W  N  E  K  L  V  I  P  Q  N  F  P  F  W  T  P  K  Y  Q  S  R  K  P  P  S  C  S  G  T  N  V  T  V  V  Q  G  D  R  N  T  T  E  L  P  M  S  I  D  A  L  D  S  F  I  R  L  N  L  G  N  W  T  G  S  F  H  :  Q  F  D  G  H  G  N  L  M  H  R  I  T  T  K  L  A  V  G  S  Y  G  E  G  E  L  M  S  L  L  Q  T :   L  Y  I  K  Q  P  P  S  T  T  S  C  S  G  D  D  C  E  S  E  W  F  E  Y  K  I  K  E  T  N  M  F  T  V  D  K  Y  Q  Q  :  I  G  F  F  P  K  E  K  A  Y  A  L  R  Y  Q  T  A  G  M  L  E  T  V  L  R  Q  G  V  L  G  E  D  D  I  G  E  E  S  P  R :   N  L  K  L  P  S  K  R  P  S  I  V  C  E  N  C  L  Y  S  L  E  K  D  R  R  V  R  A  F  H  I  M  D  P  K  G  V  L  E  M  L  L  V  F  L  E  E  R  G  N  G  E  A  I  P  P  S  F  D  D  F  K  :  E  D  T  E  R  I  L  P  H  L  G  T  W  K  G  H  S  R  T  T  R  T  G  V  Y  G  A  T  I  T  E  A  S  T  T  A  V  L  E  I  N  K  D  G  Q  L  I  Q  :  D  I  T  S  T  S  G  A  T  N  I  T  T  N  V  H  W  T  G  T  I  S  N  N  L  V  T  F  D  G  G  F  Q  L  T  L  L  P  G  G  I  Y  M  G  Y  P  S  D  V  A  K  N  V  Q  E  S  T  A  F  H  V  E  F  C  W  L  E  S  P  G  K  R  Q  R  L  I  R  T  Y  D  V  E  G  F  A  V  S  S  T  Y  F  I  E  S  K  V  *  V  I  S  P  D  S  K  R  C  A  S  D  I  I  F  A  P  A  *  T  I  F  P  G  Y  N  H  Q  H  C  S  I  N  C  I  Y  L  S  I  Y  L  F  L  Y  I  </second_frame>
            <third_frame>   G  Y  *  Q  E  E  A  S  Q  F  H  P  P  W  Q  R  R  Q  P  F  L  C  L  P  L  L  S  L  P  P  M  H  A  R  L  I  *  V  H  G  T  R  N  W  L  Y  P  K  I  F  H  S  G  L  P  S  T  S  L  G  N  H  R  H  A  P  V  P  M  S  R  W  S  K  V  I  G  I  Q  P  N  Y  Q  *  V  L  T  L  L  T  V  S  F  A  L  I  W  E  T  G  P  A  L  S  I :   N  L  M  V  M  E  I  *  C  I  E  L  Q  R  N  L  L  W  A  L  M  V  K  V  N  *  *  V  Y  Y  K   : R  Y  T  S  N  N  L  H  L  P  L  H  V  L  A  M  I  V  S  Q  S  G  L  S  T  K  S  K  R  P  T  C  L  P  S  T  N  I  N  R :   L  A  S  S  P  R  K  R  H  T  H  *  D  I  R  L  L  A  C  W  R  L  C  *  D  R  E  C  *  V  K  M  I  S  E  K  N  H  Q   : E  I  *  S  F  P  L  N  V  L  L  L  Y  V  K  I  V  F  I  H  W  R  K  I  G  E  *  E  H  F  I  *  W  T  Q  K  E  Y  W  K  C  F  L  F  S  L  K  K  E  G  T  E  R  P  F  L  P  P  L  T  I  S  R :   R  I  L  K  E  F  C  L  I  L  E  L  G  K  V  I  R  E  Q  H  V  L  V  F  M  E  Q  Q  L  L  K  Q  V  Q  L  L  F  L  K  S  T  R  T  A  S  *  F  R :   I  S  R  L  L  L  V  R  L  I  L  Q  Q  M  Y  I  G  P  V  P  Y  P  I  T  *  *  H  S  T  V  V  S  S  L  L  C  C  L  G  A  F  T  W  D  T  H  L  M  W  P  R  M  C  K  N  P  Q  H  F  T  L  S  F  V  G  *  N  R  L  A  R  D  K  D  L  S  V  L  T  M  *  R  A  L  L  F  H  L  L  I  S  S  S  P  R  S  E  L  F  P  L  I  Q  K  D  V  L  Q  T  S  Y  L  L  P  H  E  P  F  F  L  G  T  I  T  N  T  V  V  S  I  V  S  I  Y  L  Y  I  C  F  Y  I  * </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0042B19.2" strand="+"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="59410" stop="59724"/>
                    <exon start="59915" stop="60009"/>
                    <exon start="60744" stop="60861"/>
                    <exon start="60993" stop="61111"/>
                    <exon start="61790" stop="61976"/>
                    <exon start="62108" stop="62251"/>
                    <exon start="62633" stop="62923"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1266</number_coding_nucleotides>
                  <number_encoded_amino_acids>422</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>WVLTGRSVPIPSAMATAPAIFVPSTSLASSNARKINLSSWNEKLVIPQNFPFWTPKYQSRKPPSCSGTNVTVVQGDRNTTELPMSIDALDSFIRLNLGNWTGSFHQFDGHGNLMHRITTKLAVGSYGEGELMSLLQTLYIKQPPSTTSCSGDDCESEWFEYKIKETNMFTVDKYQQIGFFPKEKAYALRYQTAGMLETVLRQGVLGEDDIGEESPRNLKLPSKRPSIVCENCLYSLEKDRRVRAFHIMDPKGVLEMLLVFLEERGNGEAIPPSFDDFKEDTERILPHLGTWKGHSRTTRTGVYGATITEASTTAVLEINKDGQLIQDITSTSGATNITTNVHWTGTISNNLVTFDGGFQLTLLPGGIYMGYPSDVAKNVQESTAFHVEFCWLESPGKRQRLIRTYDVEGFAVSSTYFIESKV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="59450" e_stop="59724"/>
            <exon e_start="59915" e_stop="60009"/>
            <exon e_start="60744" e_stop="60861"/>
            <exon e_start="60936" e_stop="61111"/>
            <exon e_start="61790" e_stop="61976"/>
            <exon e_start="62108" e_stop="62175"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.196" acc_prob="0.971" e_score="1.000"/>
          <exon-intron don_prob="0.978" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.762" e_score="1.000"/>
          <exon-intron don_prob="0.869" acc_prob="0.974" e_score="1.000"/>
          <exon-only e_score="0.985"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="59450" e_stop="59724" e_length="275"/>
          </exon>
          <intron i_serial="1" don_prob="0.196" acc_prob="0.971">
            <gDNA_intron_boundary i_start="59725" i_stop="59914" i_length="190"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="59915" e_stop="60009" e_length="95"/>
          </exon>
          <intron i_serial="2" don_prob="0.978" acc_prob="0.000">
            <gDNA_intron_boundary i_start="60010" i_stop="60743" i_length="734"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="60744" e_stop="60861" e_length="118"/>
          </exon>
          <intron i_serial="3" don_prob="0.994" acc_prob="0.000">
            <gDNA_intron_boundary i_start="60862" i_stop="60935" i_length="74"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="60936" e_stop="61111" e_length="176"/>
          </exon>
          <intron i_serial="4" don_prob="0.997" acc_prob="0.762">
            <gDNA_intron_boundary i_start="61112" i_stop="61789" i_length="678"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="61790" e_stop="61976" e_length="187"/>
          </exon>
          <intron i_serial="5" don_prob="0.869" acc_prob="0.974">
            <gDNA_intron_boundary i_start="61977" i_stop="62107" i_length="131"/>
          </intron>
          <exon e_serial="6" e_score="0.985">
            <gDNA_exon_boundary e_start="62108" e_stop="62175" e_length="68"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59450" stop="59724"/>
              <exon start="59915" stop="60009"/>
              <exon start="60744" stop="60861"/>
              <exon start="60936" stop="61111"/>
              <exon start="61790" stop="61976"/>
              <exon start="62108" stop="62175"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U582168" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGGCAACGGCGCCAGCCATTTTTGTGCCTTCCACTTCTCTCGCTTCCTCCAATGCACGCAAGATTAATCTAAGTTCATGGAACGAGAAACTGGTTATACCCCAAAATTTTCCATTCTGGACTCCCAAGTACCAGTCTAGGAAACCACCGTCATGCTCCGGTACCAATGTCACGGTGGTCCAAGGTGATCGGAATACAACCGAACTACCAATGAGTATTGACGCTCTTGACAGTTTCATTCGCCTTAATTTGGGAAACTGGACCGGCTCTTTCCAT : CAATTTGATGGTCATGGAAATTTGATGCATAGAATTACAACGAAACTTGCTGTGGGCTCTTATGGTGAAGGTGAACTGATGAGTTTATTACAAAC : GTTATACATCAAACAACCTCCATCTACCACTTCATGTTCTGGCGATGATTGTGAGTCAGAGTGGTTTGAGTACAAAATCAAAGAGACCAACATGTTTACCGTCGACAAATATCAACAG : TTTCTGTTTCTTTTCAGATTTTATTGCATTTGAGGTACCACTAAAAGTAGTTTGCAGATTGGCTTCTTCCCCAAGGAAAAGGCATACGCACTAAGATATCAGACTGCTGGCATGTTGGAGACTGTGTTAAGACAGGGAGTGCTAGGTGAAGATGATATCGGAGAAGAATCACCAAG : AAATCTGAAGCTTCCCTCTAAACGTCCTTCTATTGTATGTGAAAATTGTCTTTATTCACTGGAGAAAGATAGGCGAGTGAGAGCATTTCATATAATGGACCCAAAAGGAGTACTGGAAATGCTTCTTGTTTTCCTTGAAGAAAGAGGGAACGGAGAGGCCATTCCTCCCTCCTTTGACGATTTCAAG : GAGGATACTGAAAGAATTCTGCCTCATCTTGGAACTTGGAAAGGTCATTCGCGAACAACACGTACTGG</gDNA_template>
            <first_frame> W  Q  R  R  Q  P  F  L  C  L  P  L  L  S  L  P  P  M  H  A  R  L  I  *  V  H  G  T  R  N  W  L  Y  P  K  I  F  H  S  G  L  P  S  T  S  L  G  N  H  R  H  A  P  V  P  M  S  R  W  S  K  V  I  G  I  Q  P  N  Y  Q  *  V  L  T  L  L  T  V  S  F  A  L  I  W  E  T  G  P  A  L  S  I :   N  L  M  V  M  E  I  *  C  I  E  L  Q  R  N  L  L  W  A  L  M  V  K  V  N  *  *  V  Y  Y  K   : R  Y  T  S  N  N  L  H  L  P  L  H  V  L  A  M  I  V  S  Q  S  G  L  S  T  K  S  K  R  P  T  C  L  P  S  T  N  I  N  S :   F  C  F  F  S  D  F  I  A  F  E  V  P  L  K  V  V  C  R  L  A  S  S  P  R  K  R  H  T  H  *  D  I  R  L  L  A  C  W  R  L  C  *  D  R  E  C  *  V  K  M  I  S  E  K  N  H  Q   : E  I  *  S  F  P  L  N  V  L  L  L  Y  V  K  I  V  F  I  H  W  R  K  I  G  E  *  E  H  F  I  *  W  T  Q  K  E  Y  W  K  C  F  L  F  S  L  K  K  E  G  T  E  R  P  F  L  P  P  L  T  I  S  R :   R  I  L  K  E  F  C  L  I  L  E  L  G  K  V  I  R  E  Q  H  V  L  </first_frame>
            <second_frame>  G  N  G  A  S  H  F  C  A  F  H  F  S  R  F  L  Q  C  T  Q  D  *  S  K  F  M  E  R  E  T  G  Y  T  P  K  F  S  I  L  D  S  Q  V  P  V  *  E  T  T  V  M  L  R  Y  Q  C  H  G  G  P  R  *  S  E  Y  N  R  T  T  N  E  Y  *  R  S  *  Q  F  H  S  P  *  F  G  K  L  D  R  L  F  P   : S  I  *  W  S  W  K  F  D  A  *  N  Y  N  E  T  C  C  G  L  L  W  *  R  *  T  D  E  F  I  T  N  :  V  I  H  Q  T  T  S  I  Y  H  F  M  F  W  R  *  L  *  V  R  V  V  *  V  Q  N  Q  R  D  Q  H  V  Y  R  R  Q  I  S  T   : V  S  V  S  F  Q  I  L  L  H  L  R  Y  H  *  K  *  F  A  D  W  L  L  P  Q  G  K  G  I  R  T  K  I  S  D  C  W  H  V  G  D  C  V  K  T  G  S  A  R  *  R  *  Y  R  R  R  I  T  K  :  K  S  E  A  S  L  *  T  S  F  Y  C  M  *  K  L  S  L  F  T  G  E  R  *  A  S  E  S  I  S  Y  N  G  P  K  R  S  T  G  N  A  S  C  F  P  *  R  K  R  E  R  R  G  H  S  S  L  L  *  R  F  Q   : G  G  Y  *  K  N  S  A  S  S  W  N  L  E  R  S  F  A  N  N  T  Y  W </second_frame>
            <third_frame>   A  T  A  P  A  I  F  V  P  S  T  S  L  A  S  S  N  A  R  K  I  N  L  S  S  W  N  E  K  L  V  I  P  Q  N  F  P  F  W  T  P  K  Y  Q  S  R  K  P  P  S  C  S  G  T  N  V  T  V  V  Q  G  D  R  N  T  T  E  L  P  M  S  I  D  A  L  D  S  F  I  R  L  N  L  G  N  W  T  G  S  F  H  :  Q  F  D  G  H  G  N  L  M  H  R  I  T  T  K  L  A  V  G  S  Y  G  E  G  E  L  M  S  L  L  Q  T :   L  Y  I  K  Q  P  P  S  T  T  S  C  S  G  D  D  C  E  S  E  W  F  E  Y  K  I  K  E  T  N  M  F  T  V  D  K  Y  Q  Q  :  F  L  F  L  F  R  F  Y  C  I  *  G  T  T  K  S  S  L  Q  I  G  F  F  P  K  E  K  A  Y  A  L  R  Y  Q  T  A  G  M  L  E  T  V  L  R  Q  G  V  L  G  E  D  D  I  G  E  E  S  P  R :   N  L  K  L  P  S  K  R  P  S  I  V  C  E  N  C  L  Y  S  L  E  K  D  R  R  V  R  A  F  H  I  M  D  P  K  G  V  L  E  M  L  L  V  F  L  E  E  R  G  N  G  E  A  I  P  P  S  F  D  D  F  K  :  E  D  T  E  R  I  L  P  H  L  G  T  W  K  G  H  S  R  T  T  R  T   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0042B19.2" strand="+"/>
                <serials PGL_serial="5" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="59452" stop="59724"/>
                    <exon start="59915" stop="60009"/>
                    <exon start="60744" stop="60861"/>
                    <exon start="60936" stop="60968"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>516</number_coding_nucleotides>
                  <number_encoded_amino_acids>172</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ATAPAIFVPSTSLASSNARKINLSSWNEKLVIPQNFPFWTPKYQSRKPPSCSGTNVTVVQGDRNTTELPMSIDALDSFIRLNLGNWTGSFHQFDGHGNLMHRITTKLAVGSYGEGELMSLLQTLYIKQPPSTTSCSGDDCESEWFEYKIKETNMFTVDKYQQFLFLFRFYCI*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0042B19.2" strand="+"/>
                <serials PGL_serial="5" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="60969" stop="61111"/>
                    <exon start="61790" stop="61976"/>
                    <exon start="62108" stop="62173"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>396</number_coding_nucleotides>
                  <number_encoded_amino_acids>132</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GTTKSSLQIGFFPKEKAYALRYQTAGMLETVLRQGVLGEDDIGEESPRNLKLPSKRPSIVCENCLYSLEKDRRVRAFHIMDPKGVLEMLLVFLEERGNGEAIPPSFDDFKEDTERILPHLGTWKGHSRTTRT</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="59432" e_stop="59724"/>
            <exon e_start="59915" e_stop="60009"/>
            <exon e_start="60744" e_stop="60861"/>
            <exon e_start="60953" e_stop="61111"/>
            <exon e_start="61790" e_stop="61895"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.196" acc_prob="0.971" e_score="0.997"/>
          <exon-intron don_prob="0.978" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.599" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.762" e_score="0.994"/>
          <exon-only e_score="0.981"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.997">
            <gDNA_exon_boundary e_start="59432" e_stop="59724" e_length="293"/>
          </exon>
          <intron i_serial="1" don_prob="0.196" acc_prob="0.971">
            <gDNA_intron_boundary i_start="59725" i_stop="59914" i_length="190"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="59915" e_stop="60009" e_length="95"/>
          </exon>
          <intron i_serial="2" don_prob="0.978" acc_prob="0.000">
            <gDNA_intron_boundary i_start="60010" i_stop="60743" i_length="734"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="60744" e_stop="60861" e_length="118"/>
          </exon>
          <intron i_serial="3" don_prob="0.994" acc_prob="0.599">
            <gDNA_intron_boundary i_start="60862" i_stop="60952" i_length="91"/>
          </intron>
          <exon e_serial="4" e_score="0.994">
            <gDNA_exon_boundary e_start="60953" e_stop="61111" e_length="159"/>
          </exon>
          <intron i_serial="4" don_prob="0.997" acc_prob="0.762">
            <gDNA_intron_boundary i_start="61112" i_stop="61789" i_length="678"/>
          </intron>
          <exon e_serial="5" e_score="0.981">
            <gDNA_exon_boundary e_start="61790" e_stop="61895" e_length="106"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59432" stop="59724"/>
              <exon start="59915" stop="60009"/>
              <exon start="60744" stop="60861"/>
              <exon start="60953" stop="61111"/>
              <exon start="61790" stop="61895"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U594541" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCCCAATTCCATCCGCCATGGCAACGGCGCCAGCCATTTTTGTGCCTTCCACTTCTCTCGCTTCCTCCAATGCACGCAAGATTAATCTAAGTTCATGGAACGAGAAACTGGTTATACCCCAAAATTTTCCATTCTGGACTCCCAAGTACCAGTCTAGGAAACCACCGTCATGCTCCGGTACCAATGTCACGGTGGTCCAAGGTGATCGGAATACAACCGAACTACCAATGAGTATTGACGCTCTTGACAGTTTCATTCGCCTTAATTTGGGAAACTGGACCGGCTCTTTCCAT : CAATTTGATGGTCATGGAAATTTGATGCATAGAATTACAACGAAACTTGCTGTGGGCTCTTATGGTGAAGGTGAACTGATGAGTTTATTACAAAC : GTTATACATCAAACAACCTCCATCTACCACTTCATGTTCTGGCGATGATTGTGAGTCAGAGTGGTTTGAGTACAAAATCAAAGAGACCAACATGTTTACCGTCGACAAATATCAACAG : ATTTTATTGCATTTGAGGTACCACTAAAAGTAGTTTGCAGATTGGCTTCTTCCCCAAGGAAAAGGCATACGCACTAAGATATCAGACTGCTGGCATGTTGGAGACTGTGTTAAGACAGGGAGTGCTAGGTGAAGATGATATCGGAGAAGAATCACCAAG : AAATCTGAAGCTTCCCTCTAAACGTCCTTCTATTGTATGTGAAAATTGTCTTTATTCACTGGAGAAAGATAGGCGAGTGAGAGCATTTCATATAATGGACCCAAAA</gDNA_template>
            <first_frame> S  Q  F  H  P  P  W  Q  R  R  Q  P  F  L  C  L  P  L  L  S  L  P  P  M  H  A  R  L  I  *  V  H  G  T  R  N  W  L  Y  P  K  I  F  H  S  G  L  P  S  T  S  L  G  N  H  R  H  A  P  V  P  M  S  R  W  S  K  V  I  G  I  Q  P  N  Y  Q  *  V  L  T  L  L  T  V  S  F  A  L  I  W  E  T  G  P  A  L  S  I :   N  L  M  V  M  E  I  *  C  I  E  L  Q  R  N  L  L  W  A  L  M  V  K  V  N  *  *  V  Y  Y  K   : R  Y  T  S  N  N  L  H  L  P  L  H  V  L  A  M  I  V  S  Q  S  G  L  S  T  K  S  K  R  P  T  C  L  P  S  T  N  I  N  R :   F  Y  C  I  *  G  T  T  K  S  S  L  Q  I  G  F  F  P  K  E  K  A  Y  A  L  R  Y  Q  T  A  G  M  L  E  T  V  L  R  Q  G  V  L  G  E  D  D  I  G  E  E  S  P  R :   N  L  K  L  P  S  K  R  P  S  I  V  C  E  N  C  L  Y  S  L  E  K  D  R  R  V  R  A  F  H  I  M  D  P  K </first_frame>
            <second_frame>  P  N  S  I  R  H  G  N  G  A  S  H  F  C  A  F  H  F  S  R  F  L  Q  C  T  Q  D  *  S  K  F  M  E  R  E  T  G  Y  T  P  K  F  S  I  L  D  S  Q  V  P  V  *  E  T  T  V  M  L  R  Y  Q  C  H  G  G  P  R  *  S  E  Y  N  R  T  T  N  E  Y  *  R  S  *  Q  F  H  S  P  *  F  G  K  L  D  R  L  F  P   : S  I  *  W  S  W  K  F  D  A  *  N  Y  N  E  T  C  C  G  L  L  W  *  R  *  T  D  E  F  I  T  N  :  V  I  H  Q  T  T  S  I  Y  H  F  M  F  W  R  *  L  *  V  R  V  V  *  V  Q  N  Q  R  D  Q  H  V  Y  R  R  Q  I  S  T   : D  F  I  A  F  E  V  P  L  K  V  V  C  R  L  A  S  S  P  R  K  R  H  T  H  *  D  I  R  L  L  A  C  W  R  L  C  *  D  R  E  C  *  V  K  M  I  S  E  K  N  H  Q   : E  I  *  S  F  P  L  N  V  L  L  L  Y  V  K  I  V  F  I  H  W  R  K  I  G  E  *  E  H  F  I  *  W  T  Q   </second_frame>
            <third_frame>   P  I  P  S  A  M  A  T  A  P  A  I  F  V  P  S  T  S  L  A  S  S  N  A  R  K  I  N  L  S  S  W  N  E  K  L  V  I  P  Q  N  F  P  F  W  T  P  K  Y  Q  S  R  K  P  P  S  C  S  G  T  N  V  T  V  V  Q  G  D  R  N  T  T  E  L  P  M  S  I  D  A  L  D  S  F  I  R  L  N  L  G  N  W  T  G  S  F  H  :  Q  F  D  G  H  G  N  L  M  H  R  I  T  T  K  L  A  V  G  S  Y  G  E  G  E  L  M  S  L  L  Q  T :   L  Y  I  K  Q  P  P  S  T  T  S  C  S  G  D  D  C  E  S  E  W  F  E  Y  K  I  K  E  T  N  M  F  T  V  D  K  Y  Q  Q  :  I  L  L  H  L  R  Y  H  *  K  *  F  A  D  W  L  L  P  Q  G  K  G  I  R  T  K  I  S  D  C  W  H  V  G  D  C  V  K  T  G  S  A  R  *  R  *  Y  R  R  R  I  T  K  :  K  S  E  A  S  L  *  T  S  F  Y  C  M  *  K  L  S  L  F  T  G  E  R  *  A  S  E  S  I  S  Y  N  G  P  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0042B19.2" strand="+"/>
                <serials PGL_serial="5" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="59434" stop="59724"/>
                    <exon start="59915" stop="60009"/>
                    <exon start="60744" stop="60861"/>
                    <exon start="60953" stop="60979"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>528</number_coding_nucleotides>
                  <number_encoded_amino_acids>176</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PIPSAMATAPAIFVPSTSLASSNARKINLSSWNEKLVIPQNFPFWTPKYQSRKPPSCSGTNVTVVQGDRNTTELPMSIDALDSFIRLNLGNWTGSFHQFDGHGNLMHRITTKLAVGSYGEGELMSLLQTLYIKQPPSTTSCSGDDCESEWFEYKIKETNMFTVDKYQQILLHLRYH*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0042B19.2" strand="+"/>
                <serials PGL_serial="5" AGS_serial="3" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="60969" stop="61111"/>
                    <exon start="61790" stop="61895"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>249</number_coding_nucleotides>
                  <number_encoded_amino_acids>83</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GTTKSSLQIGFFPKEKAYALRYQTAGMLETVLRQGVLGEDDIGEESPRNLKLPSKRPSIVCENCLYSLEKDRRVRAFHIMDPK</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="4">
          <exon_coordinates>
            <exon e_start="59423" e_stop="60009"/>
            <exon e_start="60744" e_stop="60861"/>
            <exon e_start="60936" e_stop="60983"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.978" acc_prob="0.000" e_score="0.988"/>
          <exon-intron don_prob="0.994" acc_prob="0.000" e_score="0.983"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.988">
            <gDNA_exon_boundary e_start="59423" e_stop="60009" e_length="587"/>
          </exon>
          <intron i_serial="1" don_prob="0.978" acc_prob="0.000">
            <gDNA_intron_boundary i_start="60010" i_stop="60743" i_length="734"/>
          </intron>
          <exon e_serial="2" e_score="0.983">
            <gDNA_exon_boundary e_start="60744" e_stop="60861" e_length="118"/>
          </exon>
          <intron i_serial="2" don_prob="0.994" acc_prob="0.000">
            <gDNA_intron_boundary i_start="60862" i_stop="60935" i_length="74"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="60936" e_stop="60983" e_length="48"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59423" stop="60009"/>
              <exon start="60744" stop="60861"/>
              <exon start="60936" stop="60983"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U582166" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="4" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GAAGAAGCGTCCCAATTCCATCCGCCATGGCAACGGCGCCAGCCATTTTTGTGCCTTCCACTTCTCTCGCTTCCTCCAATGCACGCAAGATTAATCTAAGTTCATGGAACGAGAAACTGGTTATACCCCAAAATTTTCCATTCTGGACTCCCAAGTACCAGTCTAGGAAACCACCGTCATGCTCCGGTACCAATGTCACGGTGGTCCAAGGTGATCGGAATACAACCGAACTACCAATGAGTATTGACGCTCTTGACAGTTTCATTCGCCTTAATTTGGGAAACTGGACCGGCTCTTTCCATGTCAGGATCAACTCCGTTCCTCTTTCTCTCTTTCTGTGGATGCATTGTCTTATTTTTGTCTATAACTTTATTATTGATAAATACACGTATATTTATGAATTTTTGATAAATATTCATATCCTATAATTTTTAGTTTGAGGTGGAAACGTGCATGGATTTGATTCCTTCATCTGCTTGATTTATTTTGCAGCAATTTGATGGTCATGGAAATTTGATGCATAGAATTACAACGAAACTTGCTGTGGGCTCTTATGGTGAAGGTGAACTGATGAGTTTATTACAAAC : GTTATACATCAAACAACCTCCATCTACCACTTCATGTTCTGGCGATGATTGTGAGTCAGAGTGGTTTGAGTACAAAATCAAAGAGACCAACATGTTTACCGTCGACAAATATCAACAG : TTTCTGTTTCTTTTCAGATTTTATTGCATTTGAGGTACCACTAAAAGT</gDNA_template>
            <first_frame> E  E  A  S  Q  F  H  P  P  W  Q  R  R  Q  P  F  L  C  L  P  L  L  S  L  P  P  M  H  A  R  L  I  *  V  H  G  T  R  N  W  L  Y  P  K  I  F  H  S  G  L  P  S  T  S  L  G  N  H  R  H  A  P  V  P  M  S  R  W  S  K  V  I  G  I  Q  P  N  Y  Q  *  V  L  T  L  L  T  V  S  F  A  L  I  W  E  T  G  P  A  L  S  M  S  G  S  T  P  F  L  F  L  S  F  C  G  C  I  V  L  F  L  S  I  T  L  L  L  I  N  T  R  I  F  M  N  F  *  *  I  F  I  S  Y  N  F  *  F  E  V  E  T  C  M  D  L  I  P  S  S  A  *  F  I  L  Q  Q  F  D  G  H  G  N  L  M  H  R  I  T  T  K  L  A  V  G  S  Y  G  E  G  E  L  M  S  L  L  Q  T :   L  Y  I  K  Q  P  P  S  T  T  S  C  S  G  D  D  C  E  S  E  W  F  E  Y  K  I  K  E  T  N  M  F  T  V  D  K  Y  Q  Q  :  F  L  F  L  F  R  F  Y  C  I  *  G  T  T  K  S </first_frame>
            <second_frame>  K  K  R  P  N  S  I  R  H  G  N  G  A  S  H  F  C  A  F  H  F  S  R  F  L  Q  C  T  Q  D  *  S  K  F  M  E  R  E  T  G  Y  T  P  K  F  S  I  L  D  S  Q  V  P  V  *  E  T  T  V  M  L  R  Y  Q  C  H  G  G  P  R  *  S  E  Y  N  R  T  T  N  E  Y  *  R  S  *  Q  F  H  S  P  *  F  G  K  L  D  R  L  F  P  C  Q  D  Q  L  R  S  S  F  S  L  S  V  D  A  L  S  Y  F  C  L  *  L  Y  Y  *  *  I  H  V  Y  L  *  I  F  D  K  Y  S  Y  P  I  I  F  S  L  R  W  K  R  A  W  I  *  F  L  H  L  L  D  L  F  C  S  N  L  M  V  M  E  I  *  C  I  E  L  Q  R  N  L  L  W  A  L  M  V  K  V  N  *  *  V  Y  Y  K   : R  Y  T  S  N  N  L  H  L  P  L  H  V  L  A  M  I  V  S  Q  S  G  L  S  T  K  S  K  R  P  T  C  L  P  S  T  N  I  N  S :   F  C  F  F  S  D  F  I  A  F  E  V  P  L  K   </second_frame>
            <third_frame>   R  S  V  P  I  P  S  A  M  A  T  A  P  A  I  F  V  P  S  T  S  L  A  S  S  N  A  R  K  I  N  L  S  S  W  N  E  K  L  V  I  P  Q  N  F  P  F  W  T  P  K  Y  Q  S  R  K  P  P  S  C  S  G  T  N  V  T  V  V  Q  G  D  R  N  T  T  E  L  P  M  S  I  D  A  L  D  S  F  I  R  L  N  L  G  N  W  T  G  S  F  H  V  R  I  N  S  V  P  L  S  L  F  L  W  M  H  C  L  I  F  V  Y  N  F  I  I  D  K  Y  T  Y  I  Y  E  F  L  I  N  I  H  I  L  *  F  L  V  *  G  G  N  V  H  G  F  D  S  F  I  C  L  I  Y  F  A  A  I  *  W  S  W  K  F  D  A  *  N  Y  N  E  T  C  C  G  L  L  W  *  R  *  T  D  E  F  I  T  N  :  V  I  H  Q  T  T  S  I  Y  H  F  M  F  W  R  *  L  *  V  R  V  V  *  V  Q  N  Q  R  D  Q  H  V  Y  R  R  Q  I  S  T   : V  S  V  S  F  Q  I  L  L  H  L  R  Y  H  *  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0042B19.2" strand="+"/>
                <serials PGL_serial="5" AGS_serial="4" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="59425" stop="59850"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>423</number_coding_nucleotides>
                  <number_encoded_amino_acids>141</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RSVPIPSAMATAPAIFVPSTSLASSNARKINLSSWNEKLVIPQNFPFWTPKYQSRKPPSCSGTNVTVVQGDRNTTELPMSIDALDSFIRLNLGNWTGSFHVRINSVPLSLFLWMHCLIFVYNFIIDKYTYIYEFLINIHIL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0042B19.2" strand="+"/>
                <serials PGL_serial="5" AGS_serial="4" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="59903" stop="60009"/>
                    <exon start="60744" stop="60861"/>
                    <exon start="60936" stop="60968"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>255</number_coding_nucleotides>
                  <number_encoded_amino_acids>85</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FILQQFDGHGNLMHRITTKLAVGSYGEGELMSLLQTLYIKQPPSTTSCSGDDCESEWFEYKIKETNMFTVDKYQQFLFLFRFYCI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="+" PGL_start="65719" PGL_stop="68583"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="65719" e_stop="66116"/>
            <exon e_start="66469" e_stop="67196"/>
            <exon e_start="67308" e_stop="67460"/>
            <exon e_start="68017" e_stop="68583"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.970" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.977" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="65719" e_stop="66116" e_length="398"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.996">
            <gDNA_intron_boundary i_start="66117" i_stop="66468" i_length="352"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="66469" e_stop="67196" e_length="728"/>
          </exon>
          <intron i_serial="2" don_prob="0.970" acc_prob="0.997">
            <gDNA_intron_boundary i_start="67197" i_stop="67307" i_length="111"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="67308" e_stop="67460" e_length="153"/>
          </exon>
          <intron i_serial="3" don_prob="0.997" acc_prob="0.977">
            <gDNA_intron_boundary i_start="67461" i_stop="68016" i_length="556"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="68017" e_stop="68583" e_length="567"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="65719" stop="66116"/>
              <exon start="66469" stop="67196"/>
              <exon start="67308" stop="67460"/>
              <exon start="68017" stop="68583"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U570041" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGAAAAAGCAACTCCACTTTCTTCTTTATCTCTTGAGAAGAAGAAGAAGAAAACTGAAAATGGGGGAAACAGGGGAAGCTTCAGCAATATCGTTTCCATCTTTGACAATTCCACCTCGCCCTTCATTTGAATCCTTTTTTAACATGTCTTCTTTCAGCCCAGGTCCAATGTCTCTTGTTTCCAGTTTCTTGTCTGATCAGAGCCCTGATTCTGCAGATTGTCCTCCTTCTTTCTCCCAGCTTCTCGCCGGATATGAATATTCTGGAGATCCTCCTGGGTGTCAAAAGAACTCTGGGTATAACCAAAATGGGTCTGTGAATCCTCAATTGTTCGTTATTCCCTCTGGTTTGAGTCCTTCTGGATTCCTTAATTCTCCTGGCTTTCTTTCCCCACTTCAG : AGTCCCTTTGGAATGTCACATCAGCAGGCTCTAGCACATGTTACAGCACAGGCTGAATTTTCTAGTTCATATATGCAAATGCAAATGCAAATGCAAGCCCAAGACCAGTGTTCCTCTCAGGTGGCTCCAGTAGAAGCATTAGGACATGAGTTGTCGATTGATCCAAAGGAGTCTTCCTTGCAGATAAAGGAATGTCTGCAATCTAGTTTGGATAACAAGCCATCAGACAATCAGGGTAAGCAATTTGAACAGCCGGAGGTTTCTCAATCTGAGAACAAGACATCCTCTGGTGCTCTCGATAAGCCAGCTTGTGATGGTTATAACTGGAGAAAATATGGTCAGAAAAAGGTTAAAGCTAGTGAATGCCCTAGGAGCTACTATAAGTGCACATATCTCAAATGTCTAGTGAAGAAGAAGGTTGAGCGGTCTGTTGATGGTCACATAACTGAGATCACATATAATGGCCGTCACAACCATGATCAACCAACCAAACGAAGAAAAAATGGTTCTGCTTTGGATAATACAGACTGCTTTGGAGTTCGACCAGATATTAGTACACATGATTGGACAGTAATGAATAGCTCGGATGGGTCTTCTCCTTCTCGATCTGACCAGGTTCCAACCCAAATGGTATCTGAACTTCTTGTGAAAAGAGAATGTGATGAAACCGAAAGCTATTTGATAGACGTAGATGATGAAGGGCATGATGAACCAGATGCAAAGAGAAC : GAAGACGGCAATTGAGACTGTAGCTTCATCACATGTCACAGTAGCTGAATCCAAGATTGTTCTGCAGACGAGAAGTGAAGTTGATTTCTTAGATGATGGATATAAATGGCGAAAATATGGGCAGAAGGTGGTAAAGGGGACTCAGCATCCAAG : GAGTTACTATCGGTGCACATATCCTGGATGCAATGTCCGCAAACAAGTCGAGAGGGCTTCAACTGATCCAAAAGCTGTCATAACAACATATGAAGGCAAGCATAATCATGATATTCCTACTGTTAGTGTTAGGAATAGAGGAACAAGGAATAAATACAGCTAAAGATAGCGTTGAGAACGTAAGAAACAGTGTGAAGGCCTTCAGTTCACAAAAATATCTTGGTTTCTGAAAACAACAACAAAATTCCCTCGTGTGAAAACTGAAAGATTGCAGCATTAGTAGCATCAGGAAAAGTAGAAGGGTGAAAAGATGTGGTTTGAGCTTCTTACTTCTGTACAAAAAGCTTATTATATTATCTATTCCATGTTGAAAACCACATGCTTGGTCCCTTGAATTTGTTGGTTGGTCTCAAGAAATATTTGTAAATTTTATTGCTAATTTGTAAGATGTCTAATAAAAAAAAAAAGGTGTATAGTTTGTCATTGTAGCTTCATGGGCCAGGCTTTAAACTCTAGTCAGGAAGAATAAAGGAGCTTATTCAAGCAAAGTTGTCAACTTTTGATACC</gDNA_template>
            <first_frame> R  K  S  N  S  T  F  F  F  I  S  *  E  E  E  E  E  N  *  K  W  G  K  Q  G  K  L  Q  Q  Y  R  F  H  L  *  Q  F  H  L  A  L  H  L  N  P  F  L  T  C  L  L  S  A  Q  V  Q  C  L  L  F  P  V  S  C  L  I  R  A  L  I  L  Q  I  V  L  L  L  S  P  S  F  S  P  D  M  N  I  L  E  I  L  L  G  V  K  R  T  L  G  I  T  K  M  G  L  *  I  L  N  C  S  L  F  P  L  V  *  V  L  L  D  S  L  I  L  L  A  F  F  P  H  F  R :   V  P  L  E  C  H  I  S  R  L  *  H  M  L  Q  H  R  L  N  F  L  V  H  I  C  K  C  K  C  K  C  K  P  K  T  S  V  P  L  R  W  L  Q  *  K  H  *  D  M  S  C  R  L  I  Q  R  S  L  P  C  R  *  R  N  V  C  N  L  V  W  I  T  S  H  Q  T  I  R  V  S  N  L  N  S  R  R  F  L  N  L  R  T  R  H  P  L  V  L  S  I  S  Q  L  V  M  V  I  T  G  E  N  M  V  R  K  R  L  K  L  V  N  A  L  G  A  T  I  S  A  H  I  S  N  V  *  *  R  R  R  L  S  G  L  L  M  V  T  *  L  R  S  H  I  M  A  V  T  T  M  I  N  Q  P  N  E  E  K  M  V  L  L  W  I  I  Q  T  A  L  E  F  D  Q  I  L  V  H  M  I  G  Q  *  *  I  A  R  M  G  L  L  L  L  D  L  T  R  F  Q  P  K  W  Y  L  N  F  L  *  K  E  N  V  M  K  P  K  A  I  *  *  T  *  M  M  K  G  M  M  N  Q  M  Q  R  E   : R  R  R  Q  L  R  L  *  L  H  H  M  S  Q  *  L  N  P  R  L  F  C  R  R  E  V  K  L  I  S  *  M  M  D  I  N  G  E  N  M  G  R  R  W  *  R  G  L  S  I  Q   : G  V  T  I  G  A  H  I  L  D  A  M  S  A  N  K  S  R  G  L  Q  L  I  Q  K  L  S  *  Q  H  M  K  A  S  I  I  M  I  F  L  L  L  V  L  G  I  E  E  Q  G  I  N  T  A  K  D  S  V  E  N  V  R  N  S  V  K  A  F  S  S  Q  K  Y  L  G  F  *  K  Q  Q  Q  N  S  L  V  *  K  L  K  D  C  S  I  S  S  I  R  K  S  R  R  V  K  R  C  G  L  S  F  L  L  L  Y  K  K  L  I  I  L  S  I  P  C  *  K  P  H  A  W  S  L  E  F  V  G  W  S  Q  E  I  F  V  N  F  I  A  N  L  *  D  V  *  *  K  K  K  G  V  *  F  V  I  V  A  S  W  A  R  L  *  T  L  V  R  K  N  K  G  A  Y  S  S  K  V  V  N  F  *  Y  </first_frame>
            <second_frame>  E  K  A  T  P  L  S  S  L  S  L  E  K  K  K  K  K  T  E  N  G  G  N  R  G  S  F  S  N  I  V  S  I  F  D  N  S  T  S  P  F  I  *  I  L  F  *  H  V  F  F  Q  P  R  S  N  V  S  C  F  Q  F  L  V  *  S  E  P  *  F  C  R  L  S  S  F  F  L  P  A  S  R  R  I  *  I  F  W  R  S  S  W  V  S  K  E  L  W  V  *  P  K  W  V  C  E  S  S  I  V  R  Y  S  L  W  F  E  S  F  W  I  P  *  F  S  W  L  S  F  P  T  S   : E  S  L  W  N  V  T  S  A  G  S  S  T  C  Y  S  T  G  *  I  F  *  F  I  Y  A  N  A  N  A  N  A  S  P  R  P  V  F  L  S  G  G  S  S  R  S  I  R  T  *  V  V  D  *  S  K  G  V  F  L  A  D  K  G  M  S  A  I  *  F  G  *  Q  A  I  R  Q  S  G  *  A  I  *  T  A  G  G  F  S  I  *  E  Q  D  I  L  W  C  S  R  *  A  S  L  *  W  L  *  L  E  K  I  W  S  E  K  G  *  S  *  *  M  P  *  E  L  L  *  V  H  I  S  Q  M  S  S  E  E  E  G  *  A  V  C  *  W  S  H  N  *  D  H  I  *  W  P  S  Q  P  *  S  T  N  Q  T  K  K  K  W  F  C  F  G  *  Y  R  L  L  W  S  S  T  R  Y  *  Y  T  *  L  D  S  N  E  *  L  G  W  V  F  S  F  S  I  *  P  G  S  N  P  N  G  I  *  T  S  C  E  K  R  M  *  *  N  R  K  L  F  D  R  R  R  *  *  R  A  *  *  T  R  C  K  E  N  :  E  D  G  N  *  D  C  S  F  I  T  C  H  S  S  *  I  Q  D  C  S  A  D  E  K  *  S  *  F  L  R  *  W  I  *  M  A  K  I  W  A  E  G  G  K  G  D  S  A  S  K  :  E  L  L  S  V  H  I  S  W  M  Q  C  P  Q  T  S  R  E  G  F  N  *  S  K  S  C  H  N  N  I  *  R  Q  A  *  S  *  Y  S  Y  C  *  C  *  E  *  R  N  K  E  *  I  Q  L  K  I  A  L  R  T  *  E  T  V  *  R  P  S  V  H  K  N  I  L  V  S  E  N  N  N  K  I  P  S  C  E  N  *  K  I  A  A  L  V  A  S  G  K  V  E  G  *  K  D  V  V  *  A  S  Y  F  C  T  K  S  L  L  Y  Y  L  F  H  V  E  N  H  M  L  G  P  L  N  L  L  V  G  L  K  K  Y  L  *  I  L  L  L  I  C  K  M  S  N  K  K  K  K  V  Y  S  L  S  L  *  L  H  G  P  G  F  K  L  *  S  G  R  I  K  E  L  I  Q  A  K  L  S  T  F  D  T </second_frame>
            <third_frame>   K  K  Q  L  H  F  L  L  Y  L  L  R  R  R  R  R  K  L  K  M  G  E  T  G  E  A  S  A  I  S  F  P  S  L  T  I  P  P  R  P  S  F  E  S  F  F  N  M  S  S  F  S  P  G  P  M  S  L  V  S  S  F  L  S  D  Q  S  P  D  S  A  D  C  P  P  S  F  S  Q  L  L  A  G  Y  E  Y  S  G  D  P  P  G  C  Q  K  N  S  G  Y  N  Q  N  G  S  V  N  P  Q  L  F  V  I  P  S  G  L  S  P  S  G  F  L  N  S  P  G  F  L  S  P  L  Q  :  S  P  F  G  M  S  H  Q  Q  A  L  A  H  V  T  A  Q  A  E  F  S  S  S  Y  M  Q  M  Q  M  Q  M  Q  A  Q  D  Q  C  S  S  Q  V  A  P  V  E  A  L  G  H  E  L  S  I  D  P  K  E  S  S  L  Q  I  K  E  C  L  Q  S  S  L  D  N  K  P  S  D  N  Q  G  K  Q  F  E  Q  P  E  V  S  Q  S  E  N  K  T  S  S  G  A  L  D  K  P  A  C  D  G  Y  N  W  R  K  Y  G  Q  K  K  V  K  A  S  E  C  P  R  S  Y  Y  K  C  T  Y  L  K  C  L  V  K  K  K  V  E  R  S  V  D  G  H  I  T  E  I  T  Y  N  G  R  H  N  H  D  Q  P  T  K  R  R  K  N  G  S  A  L  D  N  T  D  C  F  G  V  R  P  D  I  S  T  H  D  W  T  V  M  N  S  S  D  G  S  S  P  S  R  S  D  Q  V  P  T  Q  M  V  S  E  L  L  V  K  R  E  C  D  E  T  E  S  Y  L  I  D  V  D  D  E  G  H  D  E  P  D  A  K  R  T :   K  T  A  I  E  T  V  A  S  S  H  V  T  V  A  E  S  K  I  V  L  Q  T  R  S  E  V  D  F  L  D  D  G  Y  K  W  R  K  Y  G  Q  K  V  V  K  G  T  Q  H  P  R :   S  Y  Y  R  C  T  Y  P  G  C  N  V  R  K  Q  V  E  R  A  S  T  D  P  K  A  V  I  T  T  Y  E  G  K  H  N  H  D  I  P  T  V  S  V  R  N  R  G  T  R  N  K  Y  S  *  R  *  R  *  E  R  K  K  Q  C  E  G  L  Q  F  T  K  I  S  W  F  L  K  T  T  T  K  F  P  R  V  K  T  E  R  L  Q  H  *  *  H  Q  E  K  *  K  G  E  K  M  W  F  E  L  L  T  S  V  Q  K  A  Y  Y  I  I  Y  S  M  L  K  T  T  C  L  V  P  *  I  C  W  L  V  S  R  N  I  C  K  F  Y  C  *  F  V  R  C  L  I  K  K  K  R  C  I  V  C  H  C  S  F  M  G  Q  A  L  N  S  S  Q  E  E  *  R  S  L  F  K  Q  S  C  Q  L  L  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0042B19.2" strand="+"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="65721" stop="66116"/>
                    <exon start="66469" stop="67196"/>
                    <exon start="67308" stop="67460"/>
                    <exon start="68017" stop="68179"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1437</number_coding_nucleotides>
                  <number_encoded_amino_acids>479</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KKQLHFLLYLLRRRRRKLKMGETGEASAISFPSLTIPPRPSFESFFNMSSFSPGPMSLVSSFLSDQSPDSADCPPSFSQLLAGYEYSGDPPGCQKNSGYNQNGSVNPQLFVIPSGLSPSGFLNSPGFLSPLQSPFGMSHQQALAHVTAQAEFSSSYMQMQMQMQAQDQCSSQVAPVEALGHELSIDPKESSLQIKECLQSSLDNKPSDNQGKQFEQPEVSQSENKTSSGALDKPACDGYNWRKYGQKKVKASECPRSYYKCTYLKCLVKKKVERSVDGHITEITYNGRHNHDQPTKRRKNGSALDNTDCFGVRPDISTHDWTVMNSSDGSSPSRSDQVPTQMVSELLVKRECDETESYLIDVDDEGHDEPDAKRTKTAIETVASSHVTVAESKIVLQTRSEVDFLDDGYKWRKYGQKVVKGTQHPRSYYRCTYPGCNVRKQVERASTDPKAVITTYEGKHNHDIPTVSVRNRGTRNKYS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="+" PGL_start="69435" PGL_stop="72969"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="69435" e_stop="70046"/>
            <exon e_start="72430" e_stop="72714"/>
            <exon e_start="72852" e_stop="72969"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.965" acc_prob="0.992" e_score="0.995"/>
          <exon-intron don_prob="0.974" acc_prob="0.864" e_score="1.000"/>
          <exon-only e_score="0.983"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.995">
            <gDNA_exon_boundary e_start="69435" e_stop="70046" e_length="612"/>
          </exon>
          <intron i_serial="1" don_prob="0.965" acc_prob="0.992">
            <gDNA_intron_boundary i_start="70047" i_stop="72429" i_length="2383"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="72430" e_stop="72714" e_length="285"/>
          </exon>
          <intron i_serial="2" don_prob="0.974" acc_prob="0.864">
            <gDNA_intron_boundary i_start="72715" i_stop="72851" i_length="137"/>
          </intron>
          <exon e_serial="3" e_score="0.983">
            <gDNA_exon_boundary e_start="72852" e_stop="72969" e_length="118"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69435" stop="70046"/>
              <exon start="72430" stop="72714"/>
              <exon start="72852" stop="72969"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U573439" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTCCGCATAACACGCAAAGAAAAGAGAAGGAATCCCATCTCTCTGTTCTTCTCCACCTCAAACTATTACCTCTTTTCTCAGATCAATTTTATGAAAACAATTTTTTTTTTGCAGATACAATGAGCTAATTTGGGGAGAGACCCTTTTTCCCGCACCCATTATTTTCACCTCCCTTGACCCGTTGAATCATACGGGTCGATCTGGGTCTCTCCCAACTGGATCGAATTCATTTATGGGTTTTGGGGGGTCATGGGTTGCGTCAGCTCCAAGCAGGCCACGTCCCATTCCCCGCCCCACGATTCGTCGGTGAATGTTGCCGGTGTCGACAATGTCGATCCATTATTGCATATTGGATTTGCCCCTTTGGAGAAGATCAAAGAGGAGCCTGAGAAAGAGGGAGAGGATTCCGTTAGACGATTTTCGGGGAAATTGAGAGCATCCAAGAAGGGAAATTCTGATAAGAAGGCGGCTAGTTTTAGCATCAAATTTGGAAGGTTAACTGAAGGTGAACATTTGGCCGCCGGATGGCCTGTTTGGCTGACTGCCGTTGCCGGTGAAGCTATTGATGGATGGATGCCTCTGAAATCAAACATGTTCCAGAAATTAGAAAAG : ATTGGACAAGGTACATATAGCAGTGTTTACCGAGCACGTGATATTGGAAATGGTAAAATGGTCGCCCTGAAGAAGGTGCGATTTGACAATTTCCAACCAGATAGTGTCAGATTTATGGCACGAGAAATTGCAATTCTCCGCAAACTTGACCATCCAAACATTATGAAGCTGGAAGGGATAATCACTTCTCGGTTATCATGTAGCATTTACCTTGTTTTCGAGTATATGGAACATGACCTATCTGGATTGTTATCATGTCCTGACATCAAATTTAGTGATTCGCAG : ATCAAATGCTACATGCAGCAGCTTCTGAGCGGACTAGAGCACTGCCATTCACGAGGGATAATGCATCGGGATATTAAAGTTTCCAACATTTTGGTTAACAATGAAGGAACTCTGAAAA</gDNA_template>
            <first_frame> L  R  I  T  R  K  E  K  R  R  N  P  I  S  L  F  F  S  T  S  N  Y  Y  L  F  S  Q  I  N  F  M  K  T  I  F  F  L  Q  I  Q  *  A  N  L  G  R  D  P  F  S  R  T  H  Y  F  H  L  P  *  P  V  E  S  Y  G  S  I  W  V  S  P  N  W  I  E  F  I  Y  G  F  W  G  V  M  G  C  V  S  S  K  Q  A  T  S  H  S  P  P  H  D  S  S  V  N  V  A  G  V  D  N  V  D  P  L  L  H  I  G  F  A  P  L  E  K  I  K  E  E  P  E  K  E  G  E  D  S  V  R  R  F  S  G  K  L  R  A  S  K  K  G  N  S  D  K  K  A  A  S  F  S  I  K  F  G  R  L  T  E  G  E  H  L  A  A  G  W  P  V  W  L  T  A  V  A  G  E  A  I  D  G  W  M  P  L  K  S  N  M  F  Q  K  L  E  K  :  I  G  Q  G  T  Y  S  S  V  Y  R  A  R  D  I  G  N  G  K  M  V  A  L  K  K  V  R  F  D  N  F  Q  P  D  S  V  R  F  M  A  R  E  I  A  I  L  R  K  L  D  H  P  N  I  M  K  L  E  G  I  I  T  S  R  L  S  C  S  I  Y  L  V  F  E  Y  M  E  H  D  L  S  G  L  L  S  C  P  D  I  K  F  S  D  S  Q  :  I  K  C  Y  M  Q  Q  L  L  S  G  L  E  H  C  H  S  R  G  I  M  H  R  D  I  K  V  S  N  I  L  V  N  N  E  G  T  L  K  </first_frame>
            <second_frame>  S  A  *  H  A  K  K  R  E  G  I  P  S  L  C  S  S  P  P  Q  T  I  T  S  F  L  R  S  I  L  *  K  Q  F  F  F  C  R  Y  N  E  L  I  W  G  E  T  L  F  P  A  P  I  I  F  T  S  L  D  P  L  N  H  T  G  R  S  G  S  L  P  T  G  S  N  S  F  M  G  F  G  G  S  W  V  A  S  A  P  S  R  P  R  P  I  P  R  P  T  I  R  R  *  M  L  P  V  S  T  M  S  I  H  Y  C  I  L  D  L  P  L  W  R  R  S  K  R  S  L  R  K  R  E  R  I  P  L  D  D  F  R  G  N  *  E  H  P  R  R  E  I  L  I  R  R  R  L  V  L  A  S  N  L  E  G  *  L  K  V  N  I  W  P  P  D  G  L  F  G  *  L  P  L  P  V  K  L  L  M  D  G  C  L  *  N  Q  T  C  S  R  N  *  K  R :   L  D  K  V  H  I  A  V  F  T  E  H  V  I  L  E  M  V  K  W  S  P  *  R  R  C  D  L  T  I  S  N  Q  I  V  S  D  L  W  H  E  K  L  Q  F  S  A  N  L  T  I  Q  T  L  *  S  W  K  G  *  S  L  L  G  Y  H  V  A  F  T  L  F  S  S  I  W  N  M  T  Y  L  D  C  Y  H  V  L  T  S  N  L  V  I  R  R :   S  N  A  T  C  S  S  F  *  A  D  *  S  T  A  I  H  E  G  *  C  I  G  I  L  K  F  P  T  F  W  L  T  M  K  E  L  *  K </second_frame>
            <third_frame>   P  H  N  T  Q  R  K  E  K  E  S  H  L  S  V  L  L  H  L  K  L  L  P  L  F  S  D  Q  F  Y  E  N  N  F  F  F  A  D  T  M  S  *  F  G  E  R  P  F  F  P  H  P  L  F  S  P  P  L  T  R  *  I  I  R  V  D  L  G  L  S  Q  L  D  R  I  H  L  W  V  L  G  G  H  G  L  R  Q  L  Q  A  G  H  V  P  F  P  A  P  R  F  V  G  E  C  C  R  C  R  Q  C  R  S  I  I  A  Y  W  I  C  P  F  G  E  D  Q  R  G  A  *  E  R  G  R  G  F  R  *  T  I  F  G  E  I  E  S  I  Q  E  G  K  F  *  *  E  G  G  *  F  *  H  Q  I  W  K  V  N  *  R  *  T  F  G  R  R  M  A  C  L  A  D  C  R  C  R  *  S  Y  *  W  M  D  A  S  E  I  K  H  V  P  E  I  R  K   : D  W  T  R  Y  I  *  Q  C  L  P  S  T  *  Y  W  K  W  *  N  G  R  P  E  E  G  A  I  *  Q  F  P  T  R  *  C  Q  I  Y  G  T  R  N  C  N  S  P  Q  T  *  P  S  K  H  Y  E  A  G  R  D  N  H  F  S  V  I  M  *  H  L  P  C  F  R  V  Y  G  T  *  P  I  W  I  V  I  M  S  *  H  Q  I  *  *  F  A   : D  Q  M  L  H  A  A  A  S  E  R  T  R  A  L  P  F  T  R  D  N  A  S  G  Y  *  S  F  Q  H  F  G  *  Q  *  R  N  S  E   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0042B19.2" strand="+"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="69612" stop="70046"/>
                    <exon start="72430" stop="72714"/>
                    <exon start="72852" stop="72968"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>837</number_coding_nucleotides>
                  <number_encoded_amino_acids>279</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PVESYGSIWVSPNWIEFIYGFWGVMGCVSSKQATSHSPPHDSSVNVAGVDNVDPLLHIGFAPLEKIKEEPEKEGEDSVRRFSGKLRASKKGNSDKKAASFSIKFGRLTEGEHLAAGWPVWLTAVAGEAIDGWMPLKSNMFQKLEKIGQGTYSSVYRARDIGNGKMVALKKVRFDNFQPDSVRFMAREIAILRKLDHPNIMKLEGIITSRLSCSIYLVFEYMEHDLSGLLSCPDIKFSDSQIKCYMQQLLSGLEHCHSRGIMHRDIKVSNILVNNEGTLK</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="+" PGL_start="73029" PGL_stop="74622"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="73029" e_stop="73169"/>
            <exon e_start="73394" e_stop="73621"/>
            <exon e_start="73843" e_stop="73940"/>
            <exon e_start="74254" e_stop="74362"/>
            <exon e_start="74449" e_stop="74622"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.986" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.100" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.727" e_score="1.000"/>
          <exon-intron don_prob="0.879" acc_prob="0.923" e_score="1.000"/>
          <exon-only e_score="0.983"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="73029" e_stop="73169" e_length="141"/>
          </exon>
          <intron i_serial="1" don_prob="0.986" acc_prob="0.999">
            <gDNA_intron_boundary i_start="73170" i_stop="73393" i_length="224"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="73394" e_stop="73621" e_length="228"/>
          </exon>
          <intron i_serial="2" don_prob="0.996" acc_prob="0.100">
            <gDNA_intron_boundary i_start="73622" i_stop="73842" i_length="221"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="73843" e_stop="73940" e_length="98"/>
          </exon>
          <intron i_serial="3" don_prob="0.998" acc_prob="0.727">
            <gDNA_intron_boundary i_start="73941" i_stop="74253" i_length="313"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="74254" e_stop="74362" e_length="109"/>
          </exon>
          <intron i_serial="4" don_prob="0.879" acc_prob="0.923">
            <gDNA_intron_boundary i_start="74363" i_stop="74448" i_length="86"/>
          </intron>
          <exon e_serial="5" e_score="0.983">
            <gDNA_exon_boundary e_start="74449" e_stop="74622" e_length="174"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="73029" stop="73169"/>
              <exon start="73394" stop="73621"/>
              <exon start="73843" stop="73940"/>
              <exon start="74254" stop="74362"/>
              <exon start="74449" stop="74622"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U599513" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CGTGTGGTTACATTATGGTATCGACCTCCTGAACTACTATTGGGATCAACAAGTTATGGAGTCACTGTGGATTTGTGGAGTGTTGGTTGCGTTTTTGCTGAACTCTTTTTCGGAAGGCCACTCCTGAAAGGGAGGACTGAG : GTTGAACAACTGCACAAAATTTTCAAACTCTGTGGTTCCCCACCCGAAGATTACTGGAAAAGGTCTAAACTTCCACTTGCAACCATGTTCAAACCAAAGCAACCATATGACAGTACACTTCGAGATAGATGTAAAGAATTACCAAAAAGTGCTGTAAACCTTATTGAAACACTTATTTCAATAGATCCTCATAAACGTGGAACTGCTTCATCTGCTCTCAATTCTGAG : TATTTCAATACCAAGCCTTATGCTTGTGACTCGTCAAGCCTGCCAAAGTACCCACCGAACAAGGAAATTGATGCAAAGTTCAGGGAAGAAGCGAGAAG : AAAGAGAGCCAGTTCCACAGTGCAAACATCGGAAACTTCTAAAAATTCAAGAAAATCCAGGAAAGGTCTTCAAGAACCAAACAATTTCTGCAAAGTTGTTCCAACAGAG : GAAGTTGAGGCAAATGTTCATGGTTCTCATAGAAATTACGGTAGTAATGCACAGATATCTAAAGGAAGACGAGCTACTGTCTCACGGATATCAATGAAGCCATTGTATGACACAGTATCAGACGCTGCTTCTCAGATGACTGATGAGTCTCAAGGAGACAGCACTGTTCTTTCT</gDNA_template>
            <first_frame> R  V  V  T  L  W  Y  R  P  P  E  L  L  L  G  S  T  S  Y  G  V  T  V  D  L  W  S  V  G  C  V  F  A  E  L  F  F  G  R  P  L  L  K  G  R  T  E  :  V  E  Q  L  H  K  I  F  K  L  C  G  S  P  P  E  D  Y  W  K  R  S  K  L  P  L  A  T  M  F  K  P  K  Q  P  Y  D  S  T  L  R  D  R  C  K  E  L  P  K  S  A  V  N  L  I  E  T  L  I  S  I  D  P  H  K  R  G  T  A  S  S  A  L  N  S  E  :  Y  F  N  T  K  P  Y  A  C  D  S  S  S  L  P  K  Y  P  P  N  K  E  I  D  A  K  F  R  E  E  A  R  R :   K  R  A  S  S  T  V  Q  T  S  E  T  S  K  N  S  R  K  S  R  K  G  L  Q  E  P  N  N  F  C  K  V  V  P  T  E  :  E  V  E  A  N  V  H  G  S  H  R  N  Y  G  S  N  A  Q  I  S  K  G  R  R  A  T  V  S  R  I  S  M  K  P  L  Y  D  T  V  S  D  A  A  S  Q  M  T  D  E  S  Q  G  D  S  T  V  L  S </first_frame>
            <second_frame>  V  W  L  H  Y  G  I  D  L  L  N  Y  Y  W  D  Q  Q  V  M  E  S  L  W  I  C  G  V  L  V  A  F  L  L  N  S  F  S  E  G  H  S  *  K  G  G  L  R :   L  N  N  C  T  K  F  S  N  S  V  V  P  H  P  K  I  T  G  K  G  L  N  F  H  L  Q  P  C  S  N  Q  S  N  H  M  T  V  H  F  E  I  D  V  K  N  Y  Q  K  V  L  *  T  L  L  K  H  L  F  Q  *  I  L  I  N  V  E  L  L  H  L  L  S  I  L  S :   I  S  I  P  S  L  M  L  V  T  R  Q  A  C  Q  S  T  H  R  T  R  K  L  M  Q  S  S  G  K  K  R  E   : E  R  E  P  V  P  Q  C  K  H  R  K  L  L  K  I  Q  E  N  P  G  K  V  F  K  N  Q  T  I  S  A  K  L  F  Q  Q  R :   K  L  R  Q  M  F  M  V  L  I  E  I  T  V  V  M  H  R  Y  L  K  E  D  E  L  L  S  H  G  Y  Q  *  S  H  C  M  T  Q  Y  Q  T  L  L  L  R  *  L  M  S  L  K  E  T  A  L  F  F   </second_frame>
            <third_frame>   C  G  Y  I  M  V  S  T  S  *  T  T  I  G  I  N  K  L  W  S  H  C  G  F  V  E  C  W  L  R  F  C  *  T  L  F  R  K  A  T  P  E  R  E  D  *   : G  *  T  T  A  Q  N  F  Q  T  L  W  F  P  T  R  R  L  L  E  K  V  *  T  S  T  C  N  H  V  Q  T  K  A  T  I  *  Q  Y  T  S  R  *  M  *  R  I  T  K  K  C  C  K  P  Y  *  N  T  Y  F  N  R  S  S  *  T  W  N  C  F  I  C  S  Q  F  *   : V  F  Q  Y  Q  A  L  C  L  *  L  V  K  P  A  K  V  P  T  E  Q  G  N  *  C  K  V  Q  G  R  S  E  K  :  K  E  S  Q  F  H  S  A  N  I  G  N  F  *  K  F  K  K  I  Q  E  R  S  S  R  T  K  Q  F  L  Q  S  C  S  N  R   : G  S  *  G  K  C  S  W  F  S  *  K  L  R  *  *  C  T  D  I  *  R  K  T  S  Y  C  L  T  D  I  N  E  A  I  V  *  H  S  I  R  R  C  F  S  D  D  *  *  V  S  R  R  Q  H  C  S  F  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0042B19.2" strand="+"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="73029" stop="73169"/>
                    <exon start="73394" stop="73621"/>
                    <exon start="73843" stop="73940"/>
                    <exon start="74254" stop="74362"/>
                    <exon start="74449" stop="74622"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>750</number_coding_nucleotides>
                  <number_encoded_amino_acids>250</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RVVTLWYRPPELLLGSTSYGVTVDLWSVGCVFAELFFGRPLLKGRTEVEQLHKIFKLCGSPPEDYWKRSKLPLATMFKPKQPYDSTLRDRCKELPKSAVNLIETLISIDPHKRGTASSALNSEYFNTKPYACDSSSLPKYPPNKEIDAKFREEARRKRASSTVQTSETSKNSRKSRKGLQEPNNFCKVVPTEEVEANVHGSHRNYGSNAQISKGRRATVSRISMKPLYDTVSDAASQMTDESQGDSTVLS</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="+" PGL_start="75677" PGL_stop="76313"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="75677" e_stop="75783"/>
            <exon e_start="75906" e_stop="76313"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.994" acc_prob="0.984" e_score="0.963"/>
          <exon-only e_score="0.966"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.963">
            <gDNA_exon_boundary e_start="75677" e_stop="75783" e_length="107"/>
          </exon>
          <intron i_serial="1" don_prob="0.994" acc_prob="0.984">
            <gDNA_intron_boundary i_start="75784" i_stop="75905" i_length="122"/>
          </intron>
          <exon e_serial="2" e_score="0.966">
            <gDNA_exon_boundary e_start="75906" e_stop="76313" e_length="408"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75677" stop="75783"/>
              <exon start="75906" stop="76313"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U562746" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGGAAGGGTTGGGTTCTCCGGGCCCTTGTTATCTCAGTCCCAGACGTTTGACTCGAAGAAGGATAGTCAAACTCGAAAAGCTGGTCGTAGGTCCCGATTCTATGGAG : ATATATAATTGGAATGGCTAAGAGGACTTTGTGTCTCTCTTGTTGGTACCTCAAAGTTCATCGAAGGTTTTGGTATCGATCCTTGCAGTGAATGTTCTTACATATCTTCAGGAAGCTGGTGAAGAAATCATGCATAAGATGCAAGTTCACATCATAGAAATCAAAAGGGATAAGCCAGAATATTGATGCTCAAAGTGGTTTGCAAATTTCATTAACAGATTGGAGAACATTGAAATGCTCACCTTTTGCTATCCAAACTTGATTTTACAATCTCTTTTTTCTTTTTATTTGCTTTTCATAGTTTGTATTTTACATGTTTAGCTCATTTCTTATACAGCTTTCACATTATTTTTGTATATATATATCATGGGCAAAGAGGGTATGATTTATTACAGAGTTTTCTTTACT</gDNA_template>
            <first_frame> R  K  G  W  V  L  R  A  L  V  I  S  V  P  D  V  *  L  E  E  G  *  S  N  S  K  S  W  S  *  V  P  I  L  W  R :   Y  I  I  G  M  A  K  R  T  L  C  L  S  C  W  Y  L  K  V  H  R  R  F  W  Y  R  S  L  Q  *  M  F  L  H  I  F  R  K  L  V  K  K  S  C  I  R  C  K  F  T  S  *  K  S  K  G  I  S  Q  N  I  D  A  Q  S  G  L  Q  I  S  L  T  D  W  R  T  L  K  C  S  P  F  A  I  Q  T  *  F  Y  N  L  F  F  L  F  I  C  F  S  *  F  V  F  Y  M  F  S  S  F  L  I  Q  L  S  H  Y  F  C  I  Y  I  S  W  A  K  R  V  *  F  I  T  E  F  S  L   </first_frame>
            <second_frame>  G  R  V  G  F  S  G  P  L  L  S  Q  S  Q  T  F  D  S  K  K  D  S  Q  T  R  K  A  G  R  R  S  R  F  Y  G   : D  I  *  L  E  W  L  R  G  L  C  V  S  L  V  G  T  S  K  F  I  E  G  F  G  I  D  P  C  S  E  C  S  Y  I  S  S  G  S  W  *  R  N  H  A  *  D  A  S  S  H  H  R  N  Q  K  G  *  A  R  I  L  M  L  K  V  V  C  K  F  H  *  Q  I  G  E  H  *  N  A  H  L  L  L  S  K  L  D  F  T  I  S  F  F  F  L  F  A  F  H  S  L  Y  F  T  C  L  A  H  F  L  Y  S  F  H  I  I  F  V  Y  I  Y  H  G  Q  R  G  Y  D  L  L  Q  S  F  L  Y  </second_frame>
            <third_frame>   E  G  L  G  S  P  G  P  C  Y  L  S  P  R  R  L  T  R  R  R  I  V  K  L  E  K  L  V  V  G  P  D  S  M  E  :  I  Y  N  W  N  G  *  E  D  F  V  S  L  L  L  V  P  Q  S  S  S  K  V  L  V  S  I  L  A  V  N  V  L  T  Y  L  Q  E  A  G  E  E  I  M  H  K  M  Q  V  H  I  I  E  I  K  R  D  K  P  E  Y  *  C  S  K  W  F  A  N  F  I  N  R  L  E  N  I  E  M  L  T  F  C  Y  P  N  L  I  L  Q  S  L  F  S  F  Y  L  L  F  I  V  C  I  L  H  V  *  L  I  S  Y  T  A  F  T  L  F  L  Y  I  Y  I  M  G  K  E  G  M  I  Y  Y  R  V  F  F  T </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02SLm0042B19.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="-" PGL_start="79321" PGL_stop="77704"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="79321" e_stop="79255"/>
            <exon e_start="78670" e_stop="78476"/>
            <exon e_start="78366" e_stop="78244"/>
            <exon e_start="78114" e_stop="77704"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.982" e_score="0.985"/>
          <exon-intron don_prob="0.993" acc_prob="0.974" e_score="0.995"/>
          <exon-intron don_prob="0.918" acc_prob="0.992" e_score="1.000"/>
          <exon-only e_score="0.976"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.985">
            <gDNA_exon_boundary e_start="79321" e_stop="79255" e_length="67"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.982">
            <gDNA_intron_boundary i_start="79254" i_stop="78671" i_length="584"/>
          </intron>
          <exon e_serial="2" e_score="0.995">
            <gDNA_exon_boundary e_start="78670" e_stop="78476" e_length="195"/>
          </exon>
          <intron i_serial="2" don_prob="0.993" acc_prob="0.974">
            <gDNA_intron_boundary i_start="78475" i_stop="78367" i_length="109"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="78366" e_stop="78244" e_length="123"/>
          </exon>
          <intron i_serial="3" don_prob="0.918" acc_prob="0.992">
            <gDNA_intron_boundary i_start="78243" i_stop="78115" i_length="129"/>
          </intron>
          <exon e_serial="4" e_score="0.976">
            <gDNA_exon_boundary e_start="78114" e_stop="77704" e_length="411"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="79321" stop="79255"/>
              <exon start="78670" stop="78476"/>
              <exon start="78366" stop="78244"/>
              <exon start="78114" stop="77704"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U600288" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TGTATATTTTAAGATTTCTGAAACTACAGAGAAAGACGTCTCTCCTCAGTTCCTGGAAAGCATCAAG : AAACTTATCGATGATGATATGGAGAAGGTTAAAGGATTTGCAAAAGATTCAATAGTTCCTTTCAGAGAGAGGTTGAAAATAATGGTTGGGGCGGTTAATCCAGAAGATCTTGTTTCCAGTTCAACTGAAAGGAAGCTTTTGAATAGTTACAACGAGAAACCTGTGCTTTCCCGTCCTCAACACAGCTTTTATGAG : GGCTCAAATTACTTTGAGATTGATCTTGACATTCATCGCTTCAGCTACATAGCAAGAAGGGGACTTGATGCATTCAGAGATCGTTTACAACATGGCATATTGGATCTTGGTCTAACAATTCAG : GCACAAAAGCCGGAGGAGCTGCCCGAGCAAGTTCTTGCTTGTGTGAGATTGAACAAGATTGATTTTGTTGACAATGGACAAATTCCAACTCTTCTGAGCATTGAGGAAGATAATTGTTCATACTAATTTATACAAAATCAGTGATACATTTGCATATTGCATGGGGGAGTTTTCAAATGGTCCCTTGATGATCAAGCAATTCCAACTTTCTATACAAGCAAAAAAAAAAAAAACATTGTATAATAAGAAATTGTATTCTGAAAGATGAAATTTTTAAAAAAAGGTGATCATGTTGATACTAAGGTCCACCATTTTTCAACTGATCACACCCCTAACATAATTTAGTACTAATAAGAAAAAACCAATATCACTTAGCATTTACTTTATTTAAGATATTGTATATATTTTGAG</gDNA_template>
            <first_frame> C  I  F  *  D  F  *  N  Y  R  E  R  R  L  S  S  V  P  G  K  H  Q   : E  T  Y  R  *  *  Y  G  E  G  *  R  I  C  K  R  F  N  S  S  F  Q  R  E  V  E  N  N  G  W  G  G  *  S  R  R  S  C  F  Q  F  N  *  K  E  A  F  E  *  L  Q  R  E  T  C  A  F  P  S  S  T  Q  L  L  *   : G  L  K  L  L  *  D  *  S  *  H  S  S  L  Q  L  H  S  K  K  G  T  *  C  I  Q  R  S  F  T  T  W  H  I  G  S  W  S  N  N  S   : G  T  K  A  G  G  A  A  R  A  S  S  C  L  C  E  I  E  Q  D  *  F  C  *  Q  W  T  N  S  N  S  S  E  H  *  G  R  *  L  F  I  L  I  Y  T  K  S  V  I  H  L  H  I  A  W  G  S  F  Q  M  V  P  *  *  S  S  N  S  N  F  L  Y  K  Q  K  K  K  K  H  C  I  I  R  N  C  I  L  K  D  E  I  F  K  K  R  *  S  C  *  Y  *  G  P  P  F  F  N  *  S  H  P  *  H  N  L  V  L  I  R  K  N  Q  Y  H  L  A  F  T  L  F  K  I  L  Y  I  F  *  </first_frame>
            <second_frame>  V  Y  F  K  I  S  E  T  T  E  K  D  V  S  P  Q  F  L  E  S  I  K  :  K  L  I  D  D  D  M  E  K  V  K  G  F  A  K  D  S  I  V  P  F  R  E  R  L  K  I  M  V  G  A  V  N  P  E  D  L  V  S  S  S  T  E  R  K  L  L  N  S  Y  N  E  K  P  V  L  S  R  P  Q  H  S  F  Y  E  :  G  S  N  Y  F  E  I  D  L  D  I  H  R  F  S  Y  I  A  R  R  G  L  D  A  F  R  D  R  L  Q  H  G  I  L  D  L  G  L  T  I  Q  :  A  Q  K  P  E  E  L  P  E  Q  V  L  A  C  V  R  L  N  K  I  D  F  V  D  N  G  Q  I  P  T  L  L  S  I  E  E  D  N  C  S  Y  *  F  I  Q  N  Q  *  Y  I  C  I  L  H  G  G  V  F  K  W  S  L  D  D  Q  A  I  P  T  F  Y  T  S  K  K  K  K  N  I  V  *  *  E  I  V  F  *  K  M  K  F  L  K  K  G  D  H  V  D  T  K  V  H  H  F  S  T  D  H  T  P  N  I  I  *  Y  *  *  E  K  T  N  I  T  *  H  L  L  Y  L  R  Y  C  I  Y  F  E </second_frame>
            <third_frame>   Y  I  L  R  F  L  K  L  Q  R  K  T  S  L  L  S  S  W  K  A  S  R :   N  L  S  M  M  I  W  R  R  L  K  D  L  Q  K  I  Q  *  F  L  S  E  R  G  *  K  *  W  L  G  R  L  I  Q  K  I  L  F  P  V  Q  L  K  G  S  F  *  I  V  T  T  R  N  L  C  F  P  V  L  N  T  A  F  M  R :   A  Q  I  T  L  R  L  I  L  T  F  I  A  S  A  T  *  Q  E  G  D  L  M  H  S  E  I  V  Y  N  M  A  Y  W  I  L  V  *  Q  F  R :   H  K  S  R  R  S  C  P  S  K  F  L  L  V  *  D  *  T  R  L  I  L  L  T  M  D  K  F  Q  L  F  *  A  L  R  K  I  I  V  H  T  N  L  Y  K  I  S  D  T  F  A  Y  C  M  G  E  F  S  N  G  P  L  M  I  K  Q  F  Q  L  S  I  Q  A  K  K  K  K  T  L  Y  N  K  K  L  Y  S  E  R  *  N  F  *  K  K  V  I  M  L  I  L  R  S  T  I  F  Q  L  I  T  P  L  T  *  F  S  T  N  K  K  K  P  I  S  L  S  I  Y  F  I  *  D  I  V  Y  I  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0042B19.2" strand="-"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="79320" stop="79255"/>
                    <exon start="78670" stop="78476"/>
                    <exon start="78366" stop="78244"/>
                    <exon start="78114" stop="77989"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>507</number_coding_nucleotides>
                  <number_encoded_amino_acids>169</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VYFKISETTEKDVSPQFLESIKKLIDDDMEKVKGFAKDSIVPFRERLKIMVGAVNPEDLVSSSTERKLLNSYNEKPVLSRPQHSFYEGSNYFEIDLDIHRFSYIARRGLDAFRDRLQHGILDLGLTIQAQKPEELPEQVLACVRLNKIDFVDNGQIPTLLSIEEDNCSY*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="-" PGL_start="82727" PGL_stop="79812"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="82727" e_stop="82509"/>
            <exon e_start="81865" e_stop="81811"/>
            <exon e_start="81605" e_stop="81564"/>
            <exon e_start="81324" e_stop="80991"/>
            <exon e_start="80685" e_stop="80602"/>
            <exon e_start="80180" e_stop="80134"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.000" e_score="0.868"/>
          <exon-intron don_prob="0.817" acc_prob="0.410" e_score="0.982"/>
          <exon-intron don_prob="0.866" acc_prob="0.976" e_score="0.881"/>
          <exon-intron don_prob="0.993" acc_prob="0.954" e_score="0.937"/>
          <exon-intron don_prob="0.997" acc_prob="0.168" e_score="0.988"/>
          <exon-only e_score="0.915"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.868">
            <gDNA_exon_boundary e_start="82727" e_stop="82509" e_length="219"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="82508" i_stop="81866" i_length="643"/>
          </intron>
          <exon e_serial="2" e_score="0.982">
            <gDNA_exon_boundary e_start="81865" e_stop="81811" e_length="55"/>
          </exon>
          <intron i_serial="2" don_prob="0.817" acc_prob="0.410">
            <gDNA_intron_boundary i_start="81810" i_stop="81606" i_length="205"/>
          </intron>
          <exon e_serial="3" e_score="0.881">
            <gDNA_exon_boundary e_start="81605" e_stop="81564" e_length="42"/>
          </exon>
          <intron i_serial="3" don_prob="0.866" acc_prob="0.976">
            <gDNA_intron_boundary i_start="81563" i_stop="81325" i_length="239"/>
          </intron>
          <exon e_serial="4" e_score="0.937">
            <gDNA_exon_boundary e_start="81324" e_stop="80991" e_length="334"/>
          </exon>
          <intron i_serial="4" don_prob="0.993" acc_prob="0.954">
            <gDNA_intron_boundary i_start="80990" i_stop="80686" i_length="305"/>
          </intron>
          <exon e_serial="5" e_score="0.988">
            <gDNA_exon_boundary e_start="80685" e_stop="80602" e_length="84"/>
          </exon>
          <intron i_serial="5" don_prob="0.997" acc_prob="0.168">
            <gDNA_intron_boundary i_start="80601" i_stop="80181" i_length="421"/>
          </intron>
          <exon e_serial="6" e_score="0.915">
            <gDNA_exon_boundary e_start="80180" e_stop="80134" e_length="47"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82727" stop="82509"/>
              <exon start="81865" stop="81811"/>
              <exon start="81605" stop="81564"/>
              <exon start="81324" stop="80991"/>
              <exon start="80685" stop="80602"/>
              <exon start="80180" stop="80134"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U594189" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CAGAAAAAAAACAAAAAAAAAATTAGTTGTGTGTATATATATATATATATAAATAATAAGATCAGTTGGTAAACAGAGCAGGTGCGGAAGTGTGCTTGGATCCGGCGTCGGAGCCCACACTTCCTCTTCCTATTCTCTGTATTCCTCCATTTTTTTTTCTTTTATACTTTCAACAGAAAGAGCCGAAGACGCTGCCTTCGTTCTTCCTTCACTATCAAG : GGATTATTAATATCTGCATAATTCTAGTCAGCTGGCAAACGTCTTCACCTTTTCA : ATTGATGATGCTTAATTTTGGAACTTTTACTTAATTCTGAGA : GTATCCGTATTTCTTGTGTTCCACCTGGAAGTGGTGTCTCGTATGGGATAGTATTGATTGGCAGAAAAATTTGTCACCTGAGTCAGAGGAATGGGTGCTTGTGTATCAACTCCAGCAATTCCAATCAAAATGAGGAGGAAACTTCCTGGTCGCCCTAGAAAGTACCATGGAAAGAACTCAAAATCTGCTTCGAAAATAAATGGTGATGCAGGATCAATGGTTACAGATATTGAGTTTGTTCACAAAACTACGACCTGCAGAAGATCTGAGTGCTCCAATTCTAAAGTTCATGTTACTCAGATGCAGTGGCACCATAGTCAAATAGATGCAAATG : TTCTTTGCCAGGAGGATGCATGGTTTGACACAGTCAGCATTTTTGAGTCTGACTCAGATGATGAATTCAGTAGTGTTAATGGAG : GTCGAGTTTCTCAAGTAAGGAAATCAACAATTATAAGGCTCTCTCTG</gDNA_template>
            <first_frame> Q  K  K  N  K  K  K  I  S  C  V  Y  I  Y  I  Y  I  N  N  K  I  S  W  *  T  E  Q  V  R  K  C  A  W  I  R  R  R  S  P  H  F  L  F  L  F  S  V  F  L  H  F  F  F  F  Y  T  F  N  R  K  S  R  R  R  C  L  R  S  S  F  T  I  K  :  G  L  L  I  S  A  *  F  *  S  A  G  K  R  L  H  L  F   : N  *  *  C  L  I  L  E  L  L  L  N  S  E   : S  I  R  I  S  C  V  P  P  G  S  G  V  S  Y  G  I  V  L  I  G  R  K  I  C  H  L  S  Q  R  N  G  C  L  C  I  N  S  S  N  S  N  Q  N  E  E  E  T  S  W  S  P  *  K  V  P  W  K  E  L  K  I  C  F  E  N  K  W  *  C  R  I  N  G  Y  R  Y  *  V  C  S  Q  N  Y  D  L  Q  K  I  *  V  L  Q  F  *  S  S  C  Y  S  D  A  V  A  P  *  S  N  R  C  K  C :   S  L  P  G  G  C  M  V  *  H  S  Q  H  F  *  V  *  L  R  *  *  I  Q  *  C  *  W  R :   S  S  F  S  S  K  E  I  N  N  Y  K  A  L  S  </first_frame>
            <second_frame>  R  K  K  T  K  K  K  L  V  V  C  I  Y  I  Y  I  *  I  I  R  S  V  G  K  Q  S  R  C  G  S  V  L  G  S  G  V  G  A  H  T  S  S  S  Y  S  L  Y  S  S  I  F  F  S  F  I  L  S  T  E  R  A  E  D  A  A  F  V  L  P  S  L  S  R :   D  Y  *  Y  L  H  N  S  S  Q  L  A  N  V  F  T  F  S  :  I  D  D  A  *  F  W  N  F  Y  L  I  L  R  :  V  S  V  F  L  V  F  H  L  E  V  V  S  R  M  G  *  Y  *  L  A  E  K  F  V  T  *  V  R  G  M  G  A  C  V  S  T  P  A  I  P  I  K  M  R  R  K  L  P  G  R  P  R  K  Y  H  G  K  N  S  K  S  A  S  K  I  N  G  D  A  G  S  M  V  T  D  I  E  F  V  H  K  T  T  T  C  R  R  S  E  C  S  N  S  K  V  H  V  T  Q  M  Q  W  H  H  S  Q  I  D  A  N   : V  L  C  Q  E  D  A  W  F  D  T  V  S  I  F  E  S  D  S  D  D  E  F  S  S  V  N  G   : G  R  V  S  Q  V  R  K  S  T  I  I  R  L  S  L </second_frame>
            <third_frame>   E  K  K  Q  K  K  N  *  L  C  V  Y  I  Y  I  Y  K  *  *  D  Q  L  V  N  R  A  G  A  E  V  C  L  D  P  A  S  E  P  T  L  P  L  P  I  L  C  I  P  P  F  F  F  L  L  Y  F  Q  Q  K  E  P  K  T  L  P  S  F  F  L  H  Y  Q   : G  I  I  N  I  C  I  I  L  V  S  W  Q  T  S  S  P  F  Q :   L  M  M  L  N  F  G  T  F  T  *  F  *  E :   Y  P  Y  F  L  C  S  T  W  K  W  C  L  V  W  D  S  I  D  W  Q  K  N  L  S  P  E  S  E  E  W  V  L  V  Y  Q  L  Q  Q  F  Q  S  K  *  G  G  N  F  L  V  A  L  E  S  T  M  E  R  T  Q  N  L  L  R  K  *  M  V  M  Q  D  Q  W  L  Q  I  L  S  L  F  T  K  L  R  P  A  E  D  L  S  A  P  I  L  K  F  M  L  L  R  C  S  G  T  I  V  K  *  M  Q  M  :  F  F  A  R  R  M  H  G  L  T  Q  S  A  F  L  S  L  T  Q  M  M  N  S  V  V  L  M  E  :  V  E  F  L  K  *  G  N  Q  Q  L  *  G  S  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0042B19.2" strand="-"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="81243" stop="80991"/>
                    <exon start="80685" stop="80602"/>
                    <exon start="80180" stop="80134"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>384</number_coding_nucleotides>
                  <number_encoded_amino_acids>128</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VRGMGACVSTPAIPIKMRRKLPGRPRKYHGKNSKSASKINGDAGSMVTDIEFVHKTTTCRRSECSNSKVHVTQMQWHHSQIDANVLCQEDAWFDTVSIFESDSDDEFSSVNGGRVSQVRKSTIIRLSL</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0042B19.2" strand="-"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="82668" stop="82509"/>
                    <exon start="81865" stop="81811"/>
                    <exon start="81605" stop="81572"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>246</number_coding_nucleotides>
                  <number_encoded_amino_acids>82</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DQLVNRAGAEVCLDPASEPTLPLPILCIPPFFFLLYFQQKEPKTLPSFFLHYQGIINICIILVSWQTSSPFQLMMLNFGTFT*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="82700" e_stop="82509"/>
            <exon e_start="81605" e_stop="81564"/>
            <exon e_start="81324" e_stop="80991"/>
            <exon e_start="80685" e_stop="80602"/>
            <exon e_start="80180" e_stop="80100"/>
            <exon e_start="79863" e_stop="79812"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.410" e_score="0.875"/>
          <exon-intron don_prob="0.866" acc_prob="0.976" e_score="0.881"/>
          <exon-intron don_prob="0.993" acc_prob="0.954" e_score="0.997"/>
          <exon-intron don_prob="0.997" acc_prob="0.168" e_score="0.976"/>
          <exon-intron don_prob="0.977" acc_prob="0.318" e_score="0.988"/>
          <exon-only e_score="0.962"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.875">
            <gDNA_exon_boundary e_start="82700" e_stop="82509" e_length="192"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.410">
            <gDNA_intron_boundary i_start="82508" i_stop="81606" i_length="903"/>
          </intron>
          <exon e_serial="2" e_score="0.881">
            <gDNA_exon_boundary e_start="81605" e_stop="81564" e_length="42"/>
          </exon>
          <intron i_serial="2" don_prob="0.866" acc_prob="0.976">
            <gDNA_intron_boundary i_start="81563" i_stop="81325" i_length="239"/>
          </intron>
          <exon e_serial="3" e_score="0.997">
            <gDNA_exon_boundary e_start="81324" e_stop="80991" e_length="334"/>
          </exon>
          <intron i_serial="3" don_prob="0.993" acc_prob="0.954">
            <gDNA_intron_boundary i_start="80990" i_stop="80686" i_length="305"/>
          </intron>
          <exon e_serial="4" e_score="0.976">
            <gDNA_exon_boundary e_start="80685" e_stop="80602" e_length="84"/>
          </exon>
          <intron i_serial="4" don_prob="0.997" acc_prob="0.168">
            <gDNA_intron_boundary i_start="80601" i_stop="80181" i_length="421"/>
          </intron>
          <exon e_serial="5" e_score="0.988">
            <gDNA_exon_boundary e_start="80180" e_stop="80100" e_length="81"/>
          </exon>
          <intron i_serial="5" don_prob="0.977" acc_prob="0.318">
            <gDNA_intron_boundary i_start="80099" i_stop="79864" i_length="236"/>
          </intron>
          <exon e_serial="6" e_score="0.962">
            <gDNA_exon_boundary e_start="79863" e_stop="79812" e_length="52"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82700" stop="82509"/>
              <exon start="81605" stop="81564"/>
              <exon start="81324" stop="80991"/>
              <exon start="80685" stop="80602"/>
              <exon start="80180" stop="80100"/>
              <exon start="79863" stop="79812"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U569843" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TGTGTGTATATATATATATATATAAATAATAAGATCAGTTGGTAAACAGAGCAGGTGCGGAAGTGTGCTTGGATCCGGCGTCGGAGCCCACACTTCCTCTTCCTATTCTCTGTATTCCTCCATTTTTTTTTCTTTTATACTTTCAACAGAAAGAGCCGAAGACGCTGCCTTCGTTCTTCCTTCACTATCAAG : ATTGATGATGCTTAATTTTGGAACTTTTACTTAATTCTGAGA : GTATCCGTATTTCTTGTGTTCCACCTGGAAGTGGTGTCTCGTATGGGATAGTATTGATTGGCAGAAAAATTTGTCACCTGAGTCAGAGGAATGGGTGCTTGTGTATCAACTCCAGCAATTCCAATCAAAATGAGGAGGAAACTTCCTGGTCGCCCTAGAAAGTACCATGGAAAGAACTCAAAATCTGCTTCGAAAATAAATGGTGATGCAGGATCAATGGTTACAGATATTGAGTTTGTTCACAAAACTACGACCTGCAGAAGATCTGAGTGCTCCAATTCTAAAGTTCATGTTACTCAGATGCAGTGGCACCATAGTCAAATAGATGCAAATG : TTCTTTGCCAGGAGGATGCATGGTTTGACACAGTCAGCATTTTTGAGTCTGACTCAGATGATGAATTCAGTAGTGTTAATGGAG : GTCGAGTTTCTCAAGTAAGGAAATCAACAATTATAAGGCTCTCTCTGAGAACATCTGTTGAAGAAGAAAAAAGTGGATTTC : GTGCACCAAGAAAGTATCTTTTGCGTCCCAGGGCTGGGCTCATTGTTCCTCA</gDNA_template>
            <first_frame> C  V  Y  I  Y  I  Y  I  N  N  K  I  S  W  *  T  E  Q  V  R  K  C  A  W  I  R  R  R  S  P  H  F  L  F  L  F  S  V  F  L  H  F  F  F  F  Y  T  F  N  R  K  S  R  R  R  C  L  R  S  S  F  T  I  K  :  I  D  D  A  *  F  W  N  F  Y  L  I  L  R  :  V  S  V  F  L  V  F  H  L  E  V  V  S  R  M  G  *  Y  *  L  A  E  K  F  V  T  *  V  R  G  M  G  A  C  V  S  T  P  A  I  P  I  K  M  R  R  K  L  P  G  R  P  R  K  Y  H  G  K  N  S  K  S  A  S  K  I  N  G  D  A  G  S  M  V  T  D  I  E  F  V  H  K  T  T  T  C  R  R  S  E  C  S  N  S  K  V  H  V  T  Q  M  Q  W  H  H  S  Q  I  D  A  N   : V  L  C  Q  E  D  A  W  F  D  T  V  S  I  F  E  S  D  S  D  D  E  F  S  S  V  N  G   : G  R  V  S  Q  V  R  K  S  T  I  I  R  L  S  L  R  T  S  V  E  E  E  K  S  G  F   : R  A  P  R  K  Y  L  L  R  P  R  A  G  L  I  V  P   </first_frame>
            <second_frame>  V  C  I  Y  I  Y  I  *  I  I  R  S  V  G  K  Q  S  R  C  G  S  V  L  G  S  G  V  G  A  H  T  S  S  S  Y  S  L  Y  S  S  I  F  F  S  F  I  L  S  T  E  R  A  E  D  A  A  F  V  L  P  S  L  S  R :   L  M  M  L  N  F  G  T  F  T  *  F  *  E :   Y  P  Y  F  L  C  S  T  W  K  W  C  L  V  W  D  S  I  D  W  Q  K  N  L  S  P  E  S  E  E  W  V  L  V  Y  Q  L  Q  Q  F  Q  S  K  *  G  G  N  F  L  V  A  L  E  S  T  M  E  R  T  Q  N  L  L  R  K  *  M  V  M  Q  D  Q  W  L  Q  I  L  S  L  F  T  K  L  R  P  A  E  D  L  S  A  P  I  L  K  F  M  L  L  R  C  S  G  T  I  V  K  *  M  Q  M  :  F  F  A  R  R  M  H  G  L  T  Q  S  A  F  L  S  L  T  Q  M  M  N  S  V  V  L  M  E  :  V  E  F  L  K  *  G  N  Q  Q  L  *  G  S  L  *  E  H  L  L  K  K  K  K  V  D  F  :  V  H  Q  E  S  I  F  C  V  P  G  L  G  S  L  F  L  </second_frame>
            <third_frame>   C  V  Y  I  Y  I  Y  K  *  *  D  Q  L  V  N  R  A  G  A  E  V  C  L  D  P  A  S  E  P  T  L  P  L  P  I  L  C  I  P  P  F  F  F  L  L  Y  F  Q  Q  K  E  P  K  T  L  P  S  F  F  L  H  Y  Q   : D  *  *  C  L  I  L  E  L  L  L  N  S  E   : S  I  R  I  S  C  V  P  P  G  S  G  V  S  Y  G  I  V  L  I  G  R  K  I  C  H  L  S  Q  R  N  G  C  L  C  I  N  S  S  N  S  N  Q  N  E  E  E  T  S  W  S  P  *  K  V  P  W  K  E  L  K  I  C  F  E  N  K  W  *  C  R  I  N  G  Y  R  Y  *  V  C  S  Q  N  Y  D  L  Q  K  I  *  V  L  Q  F  *  S  S  C  Y  S  D  A  V  A  P  *  S  N  R  C  K  C :   S  L  P  G  G  C  M  V  *  H  S  Q  H  F  *  V  *  L  R  *  *  I  Q  *  C  *  W  R :   S  S  F  S  S  K  E  I  N  N  Y  K  A  L  S  E  N  I  C  *  R  R  K  K  W  I  S :   C  T  K  K  V  S  F  A  S  Q  G  W  A  H  C  S  S </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0042B19.2" strand="-"/>
                <serials PGL_serial="11" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="81243" stop="80991"/>
                    <exon start="80685" stop="80602"/>
                    <exon start="80180" stop="80100"/>
                    <exon start="79863" stop="79814"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>468</number_coding_nucleotides>
                  <number_encoded_amino_acids>156</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VRGMGACVSTPAIPIKMRRKLPGRPRKYHGKNSKSASKINGDAGSMVTDIEFVHKTTTCRRSECSNSKVHVTQMQWHHSQIDANVLCQEDAWFDTVSIFESDSDDEFSSVNGGRVSQVRKSTIIRLSLRTSVEEEKSGFRAPRKYLLRPRAGLIVP</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0042B19.2" strand="-"/>
                <serials PGL_serial="11" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="82675" stop="82509"/>
                    <exon start="81605" stop="81572"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>198</number_coding_nucleotides>
                  <number_encoded_amino_acids>66</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IIRSVGKQSRCGSVLGSGVGAHTSSSYSLYSSIFFSFILSTERAEDAAFVLPSLSRLMMLNFGTFT*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="-" PGL_start="93101" PGL_stop="88891"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="93101" e_stop="92812"/>
            <exon e_start="91437" e_stop="91093"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.415" acc_prob="0.972" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="93101" e_stop="92812" e_length="290"/>
          </exon>
          <intron i_serial="1" don_prob="0.415" acc_prob="0.972">
            <gDNA_intron_boundary i_start="92811" i_stop="91438" i_length="1374"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="91437" e_stop="91093" e_length="345"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="93101" stop="92812"/>
              <exon start="91437" stop="91093"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U588339" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GCTGCCTTTGTATCTTTCCGGACACGTTTTGCCGCAGCTTCAGCTACACACATGCAGCAAGGTGTAAATCCTACACAATGGGTCACTGAGCCAGCTCCTGATCCAGAGGATGTGTATTGGCCTTTCTTTTCAGCATCATTTCTAAAGAGATGGATTAGCAACCTGGTGGTTGTTGTGGCATGCGTCCTCCTTACAGTGCTATTTCTTATACCCGTTTTAATAGTCCAAGGGCTTACACATCTTGAGCAGTTGGAAATCTGGTTTCCCTTTTTGAAAGGATTGCTTAGAAT : GCAACTTTCTTTATCGCCTATGTGGTTACATCTGGATGGACCAGCACTTCCTCAGAACTTTTTCAGCTGTCGACGCTCGTTTTCAATTTTATAAAGAGAAATATTTGTAGGAAATATGATGATGAGTTTGAGGTCCCTTCAGTTCCTTACCACAGTGAAATTCCCAGGATTCTTTTGTTTGGCCTCCTTGGTATAACATACTTCTTCCTTGCTCCCCTAATTCTGCCATTCCTCTTGGTTTACTACTGTCTGGGGTATCTCATCTACCGGAACCAGGTTGGTTGCACATTTTTTACATTTTTCTTCTGCTTCCTTGGGATACATAAAAATGACGAATTCTACTTT</gDNA_template>
            <first_frame> A  A  F  V  S  F  R  T  R  F  A  A  A  S  A  T  H  M  Q  Q  G  V  N  P  T  Q  W  V  T  E  P  A  P  D  P  E  D  V  Y  W  P  F  F  S  A  S  F  L  K  R  W  I  S  N  L  V  V  V  V  A  C  V  L  L  T  V  L  F  L  I  P  V  L  I  V  Q  G  L  T  H  L  E  Q  L  E  I  W  F  P  F  L  K  G  L  L  R  M :   Q  L  S  L  S  P  M  W  L  H  L  D  G  P  A  L  P  Q  N  F  F  S  C  R  R  S  F  S  I  L  *  R  E  I  F  V  G  N  M  M  M  S  L  R  S  L  Q  F  L  T  T  V  K  F  P  G  F  F  C  L  A  S  L  V  *  H  T  S  S  L  L  P  *  F  C  H  S  S  W  F  T  T  V  W  G  I  S  S  T  G  T  R  L  V  A  H  F  L  H  F  S  S  A  S  L  G  Y  I  K  M  T  N  S  T   </first_frame>
            <second_frame>  L  P  L  Y  L  S  G  H  V  L  P  Q  L  Q  L  H  T  C  S  K  V  *  I  L  H  N  G  S  L  S  Q  L  L  I  Q  R  M  C  I  G  L  S  F  Q  H  H  F  *  R  D  G  L  A  T  W  W  L  L  W  H  A  S  S  L  Q  C  Y  F  L  Y  P  F  *  *  S  K  G  L  H  I  L  S  S  W  K  S  G  F  P  F  *  K  D  C  L  E   : C  N  F  L  Y  R  L  C  G  Y  I  W  M  D  Q  H  F  L  R  T  F  S  A  V  D  A  R  F  Q  F  Y  K  E  K  Y  L  *  E  I  *  *  *  V  *  G  P  F  S  S  L  P  Q  *  N  S  Q  D  S  F  V  W  P  P  W  Y  N  I  L  L  P  C  S  P  N  S  A  I  P  L  G  L  L  L  S  G  V  S  H  L  P  E  P  G  W  L  H  I  F  Y  I  F  L  L  L  P  W  D  T  *  K  *  R  I  L  L  </second_frame>
            <third_frame>   C  L  C  I  F  P  D  T  F  C  R  S  F  S  Y  T  H  A  A  R  C  K  S  Y  T  M  G  H  *  A  S  S  *  S  R  G  C  V  L  A  F  L  F  S  I  I  S  K  E  M  D  *  Q  P  G  G  C  C  G  M  R  P  P  Y  S  A  I  S  Y  T  R  F  N  S  P  R  A  Y  T  S  *  A  V  G  N  L  V  S  L  F  E  R  I  A  *  N  :  A  T  F  F  I  A  Y  V  V  T  S  G  W  T  S  T  S  S  E  L  F  Q  L  S  T  L  V  F  N  F  I  K  R  N  I  C  R  K  Y  D  D  E  F  E  V  P  S  V  P  Y  H  S  E  I  P  R  I  L  L  F  G  L  L  G  I  T  Y  F  F  L  A  P  L  I  L  P  F  L  L  V  Y  Y  C  L  G  Y  L  I  Y  R  N  Q  V  G  C  T  F  F  T  F  F  F  C  F  L  G  I  H  K  N  D  E  F  Y  F </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0042B19.2" strand="-"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="93101" stop="92812"/>
                    <exon start="91437" stop="91344"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>381</number_coding_nucleotides>
                  <number_encoded_amino_acids>127</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>AAFVSFRTRFAAASATHMQQGVNPTQWVTEPAPDPEDVYWPFFSASFLKRWISNLVVVVACVLLTVLFLIPVLIVQGLTHLEQLEIWFPFLKGLLRMQLSLSPMWLHLDGPALPQNFFSCRRSFSIL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0042B19.2" strand="-"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="92814" stop="92812"/>
                    <exon start="91437" stop="91093"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>348</number_coding_nucleotides>
                  <number_encoded_amino_acids>116</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NATFFIAYVVTSGWTSTSSELFQLSTLVFNFIKRNICRKYDDEFEVPSVPYHSEIPRILLFGLLGITYFFLAPLILPFLLVYYCLGYLIYRNQVGCTFFTFFFCFLGIHKNDEFYF</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="89927" e_stop="88891"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="89927" e_stop="88891" e_length="1037"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="89927" stop="88891"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U563346" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TAGGTGACATTGAGCAAAATGTTTGCATTGAGCGCATTGCATAATCTAAATATGAATATTATCACATATTTTAGATTCCATATACGTTGCTATAGAACCTGAGATATTTATGAAAATGATTACATGCTCTAGTGATTGAGCAGTCTTGTCAATTCTAAAAGTTGTATAGGCTCCTTATTTGAGTTGTCATTTCCTAACATGTAATGAATGTTTTTCTGCCTTTCTATGAGCGCTTCAGAGTTTGCTAAAAAAGGATAAAGAGGAGCAAAATGATCCTACAATTGCAAGTTTTCATGAGAGACTAGCCACAGCTTATCAAGATCCAGCACTGCTGCATGTCGGATATTCTGGAAATAATGCAAGTATCATTGCCCCCCTTCTTGGTACTGCTGAAGTTGATGCTTAGGGTGTAATCGAGTTATTGCTTACTGTAATCATGTAACACTTTTAGTTGGCAAACATGTGGGTATGTAGTTTGAGTTCAATCTGCTAGTCTGTATAACTCCAACTTTTTGGTTCAGTACTTTGGATAACTCCACTTTCTAGTTGACACTGTATTAGATAGTCAAAGGTATAACTTTTTACTGTCAAGAGACTTGATCAAGAATCTGCATACCAGAAAGTCCACAACTAACTATAAAGGCCTGATCCTTCAGGAACTTTAATGCCTATTTTTATTCTTATATGGAGGAACTAGAAAAGGTCAAATGTGCATCACCCCAAAGCTACTTGAATTGGTCAATTATTTGCAGTGATCATGAAGTGCAAACAATTGCATTAAAGAGATTCATATTTGTGCCTGACGTCTCCATTTGTGCGTGAGAACTTTTTGGCTTTCAGTTTTTAATGCCTTCTCGTTGGAATCTTATCAGTCCCTTTCTGAACGAATGATAATTAATGAACTATTATACATCAAGTTACATCACAAGCACTAGAAGAATTGTTAATCGTTTTGGAACTTCCATGTGGAGGATTCGGAGTGGCTGTTGACATTTCTTTTCTTGATTATGTTGAAAAAATCAGCTTTAAGCCTGACC</gDNA_template>
            <first_frame> *  V  T  L  S  K  M  F  A  L  S  A  L  H  N  L  N  M  N  I  I  T  Y  F  R  F  H  I  R  C  Y  R  T  *  D  I  Y  E  N  D  Y  M  L  *  *  L  S  S  L  V  N  S  K  S  C  I  G  S  L  F  E  L  S  F  P  N  M  *  *  M  F  F  C  L  S  M  S  A  S  E  F  A  K  K  G  *  R  G  A  K  *  S  Y  N  C  K  F  S  *  E  T  S  H  S  L  S  R  S  S  T  A  A  C  R  I  F  W  K  *  C  K  Y  H  C  P  P  S  W  Y  C  *  S  *  C  L  G  C  N  R  V  I  A  Y  C  N  H  V  T  L  L  V  G  K  H  V  G  M  *  F  E  F  N  L  L  V  C  I  T  P  T  F  W  F  S  T  L  D  N  S  T  F  *  L  T  L  Y  *  I  V  K  G  I  T  F  Y  C  Q  E  T  *  S  R  I  C  I  P  E  S  P  Q  L  T  I  K  A  *  S  F  R  N  F  N  A  Y  F  Y  S  Y  M  E  E  L  E  K  V  K  C  A  S  P  Q  S  Y  L  N  W  S  I  I  C  S  D  H  E  V  Q  T  I  A  L  K  R  F  I  F  V  P  D  V  S  I  C  A  *  E  L  F  G  F  Q  F  L  M  P  S  R  W  N  L  I  S  P  F  L  N  E  *  *  L  M  N  Y  Y  T  S  S  Y  I  T  S  T  R  R  I  V  N  R  F  G  T  S  M  W  R  I  R  S  G  C  *  H  F  F  S  *  L  C  *  K  N  Q  L  *  A  *   </first_frame>
            <second_frame>  R  *  H  *  A  K  C  L  H  *  A  H  C  I  I  *  I  *  I  L  S  H  I  L  D  S  I  Y  V  A  I  E  P  E  I  F  M  K  M  I  T  C  S  S  D  *  A  V  L  S  I  L  K  V  V  *  A  P  Y  L  S  C  H  F  L  T  C  N  E  C  F  S  A  F  L  *  A  L  Q  S  L  L  K  K  D  K  E  E  Q  N  D  P  T  I  A  S  F  H  E  R  L  A  T  A  Y  Q  D  P  A  L  L  H  V  G  Y  S  G  N  N  A  S  I  I  A  P  L  L  G  T  A  E  V  D  A  *  G  V  I  E  L  L  L  T  V  I  M  *  H  F  *  L  A  N  M  W  V  C  S  L  S  S  I  C  *  S  V  *  L  Q  L  F  G  S  V  L  W  I  T  P  L  S  S  *  H  C  I  R  *  S  K  V  *  L  F  T  V  K  R  L  D  Q  E  S  A  Y  Q  K  V  H  N  *  L  *  R  P  D  P  S  G  T  L  M  P  I  F  I  L  I  W  R  N  *  K  R  S  N  V  H  H  P  K  A  T  *  I  G  Q  L  F  A  V  I  M  K  C  K  Q  L  H  *  R  D  S  Y  L  C  L  T  S  P  F  V  R  E  N  F  L  A  F  S  F  *  C  L  L  V  G  I  L  S  V  P  F  *  T  N  D  N  *  *  T  I  I  H  Q  V  T  S  Q  A  L  E  E  L  L  I  V  L  E  L  P  C  G  G  F  G  V  A  V  D  I  S  F  L  D  Y  V  E  K  I  S  F  K  P  D  </second_frame>
            <third_frame>   G  D  I  E  Q  N  V  C  I  E  R  I  A  *  S  K  Y  E  Y  Y  H  I  F  *  I  P  Y  T  L  L  *  N  L  R  Y  L  *  K  *  L  H  A  L  V  I  E  Q  S  C  Q  F  *  K  L  Y  R  L  L  I  *  V  V  I  S  *  H  V  M  N  V  F  L  P  F  Y  E  R  F  R  V  C  *  K  R  I  K  R  S  K  M  I  L  Q  L  Q  V  F  M  R  D  *  P  Q  L  I  K  I  Q  H  C  C  M  S  D  I  L  E  I  M  Q  V  S  L  P  P  F  L  V  L  L  K  L  M  L  R  V  *  S  S  Y  C  L  L  *  S  C  N  T  F  S  W  Q  T  C  G  Y  V  V  *  V  Q  S  A  S  L  Y  N  S  N  F  L  V  Q  Y  F  G  *  L  H  F  L  V  D  T  V  L  D  S  Q  R  Y  N  F  L  L  S  R  D  L  I  K  N  L  H  T  R  K  S  T  T  N  Y  K  G  L  I  L  Q  E  L  *  C  L  F  L  F  L  Y  G  G  T  R  K  G  Q  M  C  I  T  P  K  L  L  E  L  V  N  Y  L  Q  *  S  *  S  A  N  N  C  I  K  E  I  H  I  C  A  *  R  L  H  L  C  V  R  T  F  W  L  S  V  F  N  A  F  S  L  E  S  Y  Q  S  L  S  E  R  M  I  I  N  E  L  L  Y  I  K  L  H  H  K  H  *  K  N  C  *  S  F  W  N  F  H  V  E  D  S  E  W  L  L  T  F  L  F  L  I  M  L  K  K  S  A  L  S  L  T </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02SLm0042B19.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="91239" e_stop="91162"/>
            <exon e_start="90704" e_stop="90471"/>
            <exon e_start="89689" e_stop="89324"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.986" acc_prob="0.973" e_score="0.987"/>
          <exon-intron don_prob="0.956" acc_prob="0.518" e_score="1.000"/>
          <exon-only e_score="0.959"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.987">
            <gDNA_exon_boundary e_start="91239" e_stop="91162" e_length="78"/>
          </exon>
          <intron i_serial="1" don_prob="0.986" acc_prob="0.973">
            <gDNA_intron_boundary i_start="91161" i_stop="90705" i_length="457"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="90704" e_stop="90471" e_length="234"/>
          </exon>
          <intron i_serial="2" don_prob="0.956" acc_prob="0.518">
            <gDNA_intron_boundary i_start="90470" i_stop="89690" i_length="781"/>
          </intron>
          <exon e_serial="3" e_score="0.959">
            <gDNA_exon_boundary e_start="89689" e_stop="89324" e_length="366"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91239" stop="91162"/>
              <exon start="90704" stop="90471"/>
              <exon start="89689" stop="89324"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U563347" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TACTTCTTCCTTGCTCCCCTAATTCTGCCATTCCTCTTGGTTTACTACTGTCTGGGGTATCTCATCTACCGGAACCAG : CTGCTGAATGTATATGCACCCAAGTATGAGACTGGTGGAAAGTTGTGGCCTATAGTACATGATTCTATGATTTTCTCCTTGATACTGATGCATGTTATAGCCATTGGAATATTTGGGCTAAAGAAACTTCCTCTCGCTTCAAGCTTAACAGTTCCTCTTCCAATCCTTACTCTTGTGTTCAACAGCTATTGTAGGAGACGCTTCCTACCTATGTTCAAGTCTTATTCAGTCGAG : AGTTTGCTAAAAAAGGATAAAGAGGAGCAAAATGATCCTACAATTGCAAGTTTTCATGAGAGACTAGCCACAGCTTATCAAGATCCAGCACTGCTGCATGTCGGATATTCTGGAAATAATGCAAGTATCATTGCCCCCCTTCTTGGTACTGCTGAAGTTGATGCTTAGGGTGTAATCGAGTTATTGCTTACTGTAATCATGTAACACTTTTAGTTGGCAAACATGTGGGTATGTAGTTTGAGTTCAATCTGCTAGTCTGTATAACTCCAACTTTTTGGTTCAGTACTTTGGATAACTCCACTTTCTAGTTGACACTGTATTAGATAGTCAAAGGTATAACTTTTTACTGTCAAGAGACTTGATCAA</gDNA_template>
            <first_frame> Y  F  F  L  A  P  L  I  L  P  F  L  L  V  Y  Y  C  L  G  Y  L  I  Y  R  N  Q  :  L  L  N  V  Y  A  P  K  Y  E  T  G  G  K  L  W  P  I  V  H  D  S  M  I  F  S  L  I  L  M  H  V  I  A  I  G  I  F  G  L  K  K  L  P  L  A  S  S  L  T  V  P  L  P  I  L  T  L  V  F  N  S  Y  C  R  R  R  F  L  P  M  F  K  S  Y  S  V  E  :  S  L  L  K  K  D  K  E  E  Q  N  D  P  T  I  A  S  F  H  E  R  L  A  T  A  Y  Q  D  P  A  L  L  H  V  G  Y  S  G  N  N  A  S  I  I  A  P  L  L  G  T  A  E  V  D  A  *  G  V  I  E  L  L  L  T  V  I  M  *  H  F  *  L  A  N  M  W  V  C  S  L  S  S  I  C  *  S  V  *  L  Q  L  F  G  S  V  L  W  I  T  P  L  S  S  *  H  C  I  R  *  S  K  V  *  L  F  T  V  K  R  L  D  Q </first_frame>
            <second_frame>  T  S  S  L  L  P  *  F  C  H  S  S  W  F  T  T  V  W  G  I  S  S  T  G  T  S :   C  *  M  Y  M  H  P  S  M  R  L  V  E  S  C  G  L  *  Y  M  I  L  *  F  S  P  *  Y  *  C  M  L  *  P  L  E  Y  L  G  *  R  N  F  L  S  L  Q  A  *  Q  F  L  F  Q  S  L  L  L  C  S  T  A  I  V  G  D  A  S  Y  L  C  S  S  L  I  Q  S  R :   V  C  *  K  R  I  K  R  S  K  M  I  L  Q  L  Q  V  F  M  R  D  *  P  Q  L  I  K  I  Q  H  C  C  M  S  D  I  L  E  I  M  Q  V  S  L  P  P  F  L  V  L  L  K  L  M  L  R  V  *  S  S  Y  C  L  L  *  S  C  N  T  F  S  W  Q  T  C  G  Y  V  V  *  V  Q  S  A  S  L  Y  N  S  N  F  L  V  Q  Y  F  G  *  L  H  F  L  V  D  T  V  L  D  S  Q  R  Y  N  F  L  L  S  R  D  L  I   </second_frame>
            <third_frame>   L  L  P  C  S  P  N  S  A  I  P  L  G  L  L  L  S  G  V  S  H  L  P  E  P   : A  A  E  C  I  C  T  Q  V  *  D  W  W  K  V  V  A  Y  S  T  *  F  Y  D  F  L  L  D  T  D  A  C  Y  S  H  W  N  I  W  A  K  E  T  S  S  R  F  K  L  N  S  S  S  S  N  P  Y  S  C  V  Q  Q  L  L  *  E  T  L  P  T  Y  V  Q  V  L  F  S  R   : E  F  A  K  K  G  *  R  G  A  K  *  S  Y  N  C  K  F  S  *  E  T  S  H  S  L  S  R  S  S  T  A  A  C  R  I  F  W  K  *  C  K  Y  H  C  P  P  S  W  Y  C  *  S  *  C  L  G  C  N  R  V  I  A  Y  C  N  H  V  T  L  L  V  G  K  H  V  G  M  *  F  E  F  N  L  L  V  C  I  T  P  T  F  W  F  S  T  L  D  N  S  T  F  *  L  T  L  Y  *  I  V  K  G  I  T  F  Y  C  Q  E  T  *  S  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0042B19.2" strand="-"/>
                <serials PGL_serial="12" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="91239" stop="91162"/>
                    <exon start="90704" stop="90471"/>
                    <exon start="89689" stop="89522"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>477</number_coding_nucleotides>
                  <number_encoded_amino_acids>159</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>YFFLAPLILPFLLVYYCLGYLIYRNQLLNVYAPKYETGGKLWPIVHDSMIFSLILMHVIAIGIFGLKKLPLASSLTVPLPILTLVFNSYCRRRFLPMFKSYSVESLLKKDKEEQNDPTIASFHERLATAYQDPALLHVGYSGNNASIIAPLLGTAEVDA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="4">
          <exon_coordinates>
            <exon e_start="92911" e_stop="92812"/>
            <exon e_start="92707" e_stop="92431"/>
            <exon e_start="91437" e_stop="91162"/>
            <exon e_start="90519" e_stop="90471"/>
            <exon e_start="89689" e_stop="89437"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.415" acc_prob="0.935" e_score="1.000"/>
          <exon-intron don_prob="0.983" acc_prob="0.972" e_score="1.000"/>
          <exon-intron don_prob="0.986" acc_prob="0.470" e_score="1.000"/>
          <exon-intron don_prob="0.956" acc_prob="0.518" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="92911" e_stop="92812" e_length="100"/>
          </exon>
          <intron i_serial="1" don_prob="0.415" acc_prob="0.935">
            <gDNA_intron_boundary i_start="92811" i_stop="92708" i_length="104"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="92707" e_stop="92431" e_length="277"/>
          </exon>
          <intron i_serial="2" don_prob="0.983" acc_prob="0.972">
            <gDNA_intron_boundary i_start="92430" i_stop="91438" i_length="993"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="91437" e_stop="91162" e_length="276"/>
          </exon>
          <intron i_serial="3" don_prob="0.986" acc_prob="0.470">
            <gDNA_intron_boundary i_start="91161" i_stop="90520" i_length="642"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="90519" e_stop="90471" e_length="49"/>
          </exon>
          <intron i_serial="4" don_prob="0.956" acc_prob="0.518">
            <gDNA_intron_boundary i_start="90470" i_stop="89690" i_length="781"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="89689" e_stop="89437" e_length="253"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92911" stop="92812"/>
              <exon start="92707" stop="92431"/>
              <exon start="91437" stop="91162"/>
              <exon start="90519" stop="90471"/>
              <exon start="89689" stop="89437"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U563348" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="4" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTACAGTGCTATTTCTTATACCCGTTTTAATAGTCCAAGGGCTTACACATCTTGAGCAGTTGGAAATCTGGTTTCCCTTTTTGAAAGGATTGCTTAGAAT : AGCATTTGTTAGCCAAGTGATTACCGGATATCTTCCTAGTCTTGTACTTCAACTGTTTCTCTATGTTGTGCCATCCATAATGATTATGTTCTCATCCATACAAGGATACATTGCTATGAGCCAGATAGAGAAAAGTGCATGCATCAAAGTTCTTTGGTTTACTATATGGAACATTTTTTTTGCAAATGTGCTCTCTGGATCGGCTCTCTATCGAGTTGAAATTTTTCTTGAGCCCAAAAATATTCCTGCCATATTAGCTGTAGCAGTTCCAGGACAG : GCAACTTTCTTTATCGCCTATGTGGTTACATCTGGATGGACCAGCACTTCCTCAGAACTTTTTCAGCTGTCGACGCTCGTTTTCAATTTTATAAAGAGAAATATTTGTAGGAAATATGATGATGAGTTTGAGGTCCCTTCAGTTCCTTACCACAGTGAAATTCCCAGGATTCTTTTGTTTGGCCTCCTTGGTATAACATACTTCTTCCTTGCTCCCCTAATTCTGCCATTCCTCTTGGTTTACTACTGTCTGGGGTATCTCATCTACCGGAACCAG : CTATTGTAGGAGACGCTTCCTACCTATGTTCAAGTCTTATTCAGTCGAG : AGTTTGCTAAAAAAGGATAAAGAGGAGCAAAATGATCCTACAATTGCAAGTTTTCATGAGAGACTAGCCACAGCTTATCAAGATCCAGCACTGCTGCATGTCGGATATTCTGGAAATAATGCAAGTATCATTGCCCCCCTTCTTGGTACTGCTGAAGTTGATGCTTAGGGTGTAATCGAGTTATTGCTTACTGTAATCATGTAACACTTTTAGTTGGCAAACATGTGGGTATGTAGTTTGAGTTCAATCTGCT</gDNA_template>
            <first_frame> L  Q  C  Y  F  L  Y  P  F  *  *  S  K  G  L  H  I  L  S  S  W  K  S  G  F  P  F  *  K  D  C  L  E   : *  H  L  L  A  K  *  L  P  D  I  F  L  V  L  Y  F  N  C  F  S  M  L  C  H  P  *  *  L  C  S  H  P  Y  K  D  T  L  L  *  A  R  *  R  K  V  H  A  S  K  F  F  G  L  L  Y  G  T  F  F  L  Q  M  C  S  L  D  R  L  S  I  E  L  K  F  F  L  S  P  K  I  F  L  P  Y  *  L  *  Q  F  Q  D  R :   Q  L  S  L  S  P  M  W  L  H  L  D  G  P  A  L  P  Q  N  F  F  S  C  R  R  S  F  S  I  L  *  R  E  I  F  V  G  N  M  M  M  S  L  R  S  L  Q  F  L  T  T  V  K  F  P  G  F  F  C  L  A  S  L  V  *  H  T  S  S  L  L  P  *  F  C  H  S  S  W  F  T  T  V  W  G  I  S  S  T  G  T  S :   Y  C  R  R  R  F  L  P  M  F  K  S  Y  S  V  E  :  S  L  L  K  K  D  K  E  E  Q  N  D  P  T  I  A  S  F  H  E  R  L  A  T  A  Y  Q  D  P  A  L  L  H  V  G  Y  S  G  N  N  A  S  I  I  A  P  L  L  G  T  A  E  V  D  A  *  G  V  I  E  L  L  L  T  V  I  M  *  H  F  *  L  A  N  M  W  V  C  S  L  S  S  I  C  </first_frame>
            <second_frame>  Y  S  A  I  S  Y  T  R  F  N  S  P  R  A  Y  T  S  *  A  V  G  N  L  V  S  L  F  E  R  I  A  *  N  :  S  I  C  *  P  S  D  Y  R  I  S  S  *  S  C  T  S  T  V  S  L  C  C  A  I  H  N  D  Y  V  L  I  H  T  R  I  H  C  Y  E  P  D  R  E  K  C  M  H  Q  S  S  L  V  Y  Y  M  E  H  F  F  C  K  C  A  L  W  I  G  S  L  S  S  *  N  F  S  *  A  Q  K  Y  S  C  H  I  S  C  S  S  S  R  T   : G  N  F  L  Y  R  L  C  G  Y  I  W  M  D  Q  H  F  L  R  T  F  S  A  V  D  A  R  F  Q  F  Y  K  E  K  Y  L  *  E  I  *  *  *  V  *  G  P  F  S  S  L  P  Q  *  N  S  Q  D  S  F  V  W  P  P  W  Y  N  I  L  L  P  C  S  P  N  S  A  I  P  L  G  L  L  L  S  G  V  S  H  L  P  E  P   : A  I  V  G  D  A  S  Y  L  C  S  S  L  I  Q  S  R :   V  C  *  K  R  I  K  R  S  K  M  I  L  Q  L  Q  V  F  M  R  D  *  P  Q  L  I  K  I  Q  H  C  C  M  S  D  I  L  E  I  M  Q  V  S  L  P  P  F  L  V  L  L  K  L  M  L  R  V  *  S  S  Y  C  L  L  *  S  C  N  T  F  S  W  Q  T  C  G  Y  V  V  *  V  Q  S  A </second_frame>
            <third_frame>   T  V  L  F  L  I  P  V  L  I  V  Q  G  L  T  H  L  E  Q  L  E  I  W  F  P  F  L  K  G  L  L  R  I :   A  F  V  S  Q  V  I  T  G  Y  L  P  S  L  V  L  Q  L  F  L  Y  V  V  P  S  I  M  I  M  F  S  S  I  Q  G  Y  I  A  M  S  Q  I  E  K  S  A  C  I  K  V  L  W  F  T  I  W  N  I  F  F  A  N  V  L  S  G  S  A  L  Y  R  V  E  I  F  L  E  P  K  N  I  P  A  I  L  A  V  A  V  P  G  Q  :  A  T  F  F  I  A  Y  V  V  T  S  G  W  T  S  T  S  S  E  L  F  Q  L  S  T  L  V  F  N  F  I  K  R  N  I  C  R  K  Y  D  D  E  F  E  V  P  S  V  P  Y  H  S  E  I  P  R  I  L  L  F  G  L  L  G  I  T  Y  F  F  L  A  P  L  I  L  P  F  L  L  V  Y  Y  C  L  G  Y  L  I  Y  R  N  Q  :  L  L  *  E  T  L  P  T  Y  V  Q  V  L  F  S  R   : E  F  A  K  K  G  *  R  G  A  K  *  S  Y  N  C  K  F  S  *  E  T  S  H  S  L  S  R  S  S  T  A  A  C  R  I  F  W  K  *  C  K  Y  H  C  P  P  S  W  Y  C  *  S  *  C  L  G  C  N  R  V  I  A  Y  C  N  H  V  T  L  L  V  G  K  H  V  G  M  *  F  E  F  N  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0042B19.2" strand="-"/>
                <serials PGL_serial="12" AGS_serial="4" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="92909" stop="92812"/>
                    <exon start="92707" stop="92431"/>
                    <exon start="91437" stop="91162"/>
                    <exon start="90519" stop="90511"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>657</number_coding_nucleotides>
                  <number_encoded_amino_acids>219</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TVLFLIPVLIVQGLTHLEQLEIWFPFLKGLLRIAFVSQVITGYLPSLVLQLFLYVVPSIMIMFSSIQGYIAMSQIEKSACIKVLWFTIWNIFFANVLSGSALYRVEIFLEPKNIPAILAVAVPGQATFFIAYVVTSGWTSTSSELFQLSTLVFNFIKRNICRKYDDEFEVPSVPYHSEIPRILLFGLLGITYFFLAPLILPFLLVYYCLGYLIYRNQLL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="-" PGL_start="98441" PGL_stop="94641"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="98441" e_stop="98277"/>
            <exon e_start="97715" e_stop="97323"/>
            <exon e_start="95983" e_stop="95831"/>
            <exon e_start="94929" e_stop="94866"/>
            <exon e_start="94779" e_stop="94641"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.808" e_score="1.000"/>
          <exon-intron don_prob="0.675" acc_prob="0.654" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.630" acc_prob="0.000" e_score="0.984"/>
          <exon-only e_score="0.942"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="98441" e_stop="98277" e_length="165"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.808">
            <gDNA_intron_boundary i_start="98276" i_stop="97716" i_length="561"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="97715" e_stop="97323" e_length="393"/>
          </exon>
          <intron i_serial="2" don_prob="0.675" acc_prob="0.654">
            <gDNA_intron_boundary i_start="97322" i_stop="95984" i_length="1339"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="95983" e_stop="95831" e_length="153"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="95830" i_stop="94930" i_length="901"/>
          </intron>
          <exon e_serial="4" e_score="0.984">
            <gDNA_exon_boundary e_start="94929" e_stop="94866" e_length="64"/>
          </exon>
          <intron i_serial="4" don_prob="0.630" acc_prob="0.000">
            <gDNA_intron_boundary i_start="94865" i_stop="94780" i_length="86"/>
          </intron>
          <exon e_serial="5" e_score="0.942">
            <gDNA_exon_boundary e_start="94779" e_stop="94641" e_length="139"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98441" stop="98277"/>
              <exon start="97715" stop="97323"/>
              <exon start="95983" stop="95831"/>
              <exon start="94929" stop="94866"/>
              <exon start="94779" stop="94641"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U574517" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GGAAAAGCATAGCATAGTGGAAAAAATAGTTTACTTAAAACTCCACTGCAACTCTTTTCGTCCCTTTTCTTCGTAGTAAAGTAAAGGTTTGACCTTTGGATCTCTCGTCTCTATCTATCTTCTTCATTAGGATTAGGGCTACAAAGGTCGTATCTTCTGTTGAAG : CTGCGATAATCTGCATTCACGAGTGTTTATTATCTGTGCTATTCGTATTCTGGTGCTGTTGATTTGAAGAGCTCATGTTGTAAGCAAACAGTTCAGTGAAAGGATTTAAGGAATGATCCTCTCAGCACTTTTGACTTCTGTTGGAATAAATCTTGGACTTTGTTTTCTGTTCTTCACATTGTATTCTATATTGAGAAAGCAGCCAGGAAATGCAGAAGTTTATGCACCACGCTTGGTTGCTGAGGGGAGATCTCAGCAAATCAGTAATTTCAATTTGGAGAGACTTTTGCCATCAGCTGGTTGGGTGACAAGAGCATGGCGACCCTCAGAAGCAGAGCTCTTAGCCAACTCAGGCTTGGATGCTGTTGTTTTCATGCGCATTTTTATATTCAG : TGCTAAAGTTTTTACCTTTGCTGTCATTGTGGGGATTTTCATTCTTCTGCCTATCAATTACATGGGGAATCAACTAAGTCTTGATTTGTTTGACTTGCCCAATAAGTCTCTGGAATCATTCACTATCTCAAATGTTGACGACGGATCAAACAG : GTTATGGATCCATTTCTCAGCTGTGTATATTTTCACAGCAGTTGTTTGCTATCTTCTTTACATT : GAGTATGACTATATTTCATCAAAGAGAGTTTCATATTTTTGTTCATCAAAACCTCATCCACATCAATTCACCATTTTAGTTCGAAGTATTCCAGCTTCATCAGGAAGAAGTTACAGTGAAACAGTTGAAAGTTTTTTCT</gDNA_template>
            <first_frame> G  K  A  *  H  S  G  K  N  S  L  L  K  T  P  L  Q  L  F  S  S  L  F  F  V  V  K  *  R  F  D  L  W  I  S  R  L  Y  L  S  S  S  L  G  L  G  L  Q  R  S  Y  L  L  L  K  :  L  R  *  S  A  F  T  S  V  Y  Y  L  C  Y  S  Y  S  G  A  V  D  L  K  S  S  C  C  K  Q  T  V  Q  *  K  D  L  R  N  D  P  L  S  T  F  D  F  C  W  N  K  S  W  T  L  F  S  V  L  H  I  V  F  Y  I  E  K  A  A  R  K  C  R  S  L  C  T  T  L  G  C  *  G  E  I  S  A  N  Q  *  F  Q  F  G  E  T  F  A  I  S  W  L  G  D  K  S  M  A  T  L  R  S  R  A  L  S  Q  L  R  L  G  C  C  C  F  H  A  H  F  Y  I  Q  :  C  *  S  F  Y  L  C  C  H  C  G  D  F  H  S  S  A  Y  Q  L  H  G  E  S  T  K  S  *  F  V  *  L  A  Q  *  V  S  G  I  I  H  Y  L  K  C  *  R  R  I  K  Q  :  V  M  D  P  F  L  S  C  V  Y  F  H  S  S  C  L  L  S  S  L  H   : *  V  *  L  Y  F  I  K  E  S  F  I  F  L  F  I  K  T  S  S  T  S  I  H  H  F  S  S  K  Y  S  S  F  I  R  K  K  L  Q  *  N  S  *  K  F  F   </first_frame>
            <second_frame>  E  K  H  S  I  V  E  K  I  V  Y  L  K  L  H  C  N  S  F  R  P  F  S  S  *  *  S  K  G  L  T  F  G  S  L  V  S  I  Y  L  L  H  *  D  *  G  Y  K  G  R  I  F  C  *  S :   C  D  N  L  H  S  R  V  F  I  I  C  A  I  R  I  L  V  L  L  I  *  R  A  H  V  V  S  K  Q  F  S  E  R  I  *  G  M  I  L  S  A  L  L  T  S  V  G  I  N  L  G  L  C  F  L  F  F  T  L  Y  S  I  L  R  K  Q  P  G  N  A  E  V  Y  A  P  R  L  V  A  E  G  R  S  Q  Q  I  S  N  F  N  L  E  R  L  L  P  S  A  G  W  V  T  R  A  W  R  P  S  E  A  E  L  L  A  N  S  G  L  D  A  V  V  F  M  R  I  F  I  F  S :   A  K  V  F  T  F  A  V  I  V  G  I  F  I  L  L  P  I  N  Y  M  G  N  Q  L  S  L  D  L  F  D  L  P  N  K  S  L  E  S  F  T  I  S  N  V  D  D  G  S  N  R :   L  W  I  H  F  S  A  V  Y  I  F  T  A  V  V  C  Y  L  L  Y  I  :  E  Y  D  Y  I  S  S  K  R  V  S  Y  F  C  S  S  K  P  H  P  H  Q  F  T  I  L  V  R  S  I  P  A  S  S  G  R  S  Y  S  E  T  V  E  S  F  F  </second_frame>
            <third_frame>   K  S  I  A  *  W  K  K  *  F  T  *  N  S  T  A  T  L  F  V  P  F  L  R  S  K  V  K  V  *  P  L  D  L  S  S  L  S  I  F  F  I  R  I  R  A  T  K  V  V  S  S  V  E   : A  A  I  I  C  I  H  E  C  L  L  S  V  L  F  V  F  W  C  C  *  F  E  E  L  M  L  *  A  N  S  S  V  K  G  F  K  E  *  S  S  Q  H  F  *  L  L  L  E  *  I  L  D  F  V  F  C  S  S  H  C  I  L  Y  *  E  S  S  Q  E  M  Q  K  F  M  H  H  A  W  L  L  R  G  D  L  S  K  S  V  I  S  I  W  R  D  F  C  H  Q  L  V  G  *  Q  E  H  G  D  P  Q  K  Q  S  S  *  P  T  Q  A  W  M  L  L  F  S  C  A  F  L  Y  S   : V  L  K  F  L  P  L  L  S  L  W  G  F  S  F  F  C  L  S  I  T  W  G  I  N  *  V  L  I  C  L  T  C  P  I  S  L  W  N  H  S  L  S  Q  M  L  T  T  D  Q  T   : G  Y  G  S  I  S  Q  L  C  I  F  S  Q  Q  L  F  A  I  F  F  T  L :   S  M  T  I  F  H  Q  R  E  F  H  I  F  V  H  Q  N  L  I  H  I  N  S  P  F  *  F  E  V  F  Q  L  H  Q  E  E  V  T  V  K  Q  L  K  V  F  S </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0042B19.2" strand="-"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="97606" stop="97323"/>
                    <exon start="95983" stop="95831"/>
                    <exon start="94929" stop="94866"/>
                    <exon start="94779" stop="94642"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>639</number_coding_nucleotides>
                  <number_encoded_amino_acids>213</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GMILSALLTSVGINLGLCFLFFTLYSILRKQPGNAEVYAPRLVAEGRSQQISNFNLERLLPSAGWVTRAWRPSEAELLANSGLDAVVFMRIFIFSAKVFTFAVIVGIFILLPINYMGNQLSLDLFDLPNKSLESFTISNVDDGSNRLWIHFSAVYIFTAVVCYLLYIEYDYISSKRVSYFCSSKPHPHQFTILVRSIPASSGRSYSETVESFF</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="98417" e_stop="97943"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.943"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.943">
            <gDNA_exon_boundary e_start="98417" e_stop="97943" e_length="475"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98417" stop="97943"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U589073" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AATAGTTTACTTAAAACTCCACTGCAACTCTTTTCGTCCCTTTTCTTCGTAGTAAAGTAAAGGTTTGACCTTTGGATCTCTCGTCTCTATCTATCTTCTTCATTAGGATTAGGGCTACAAAGGTCGTATCTTCTGTTGAAGGTAATTAATCATCATTCATCACTTACTTGTACTTGTTTTGTTTTCAATATGTTTACATATCCACTCTAATTAACAAAAATAACTTTATTAAGGAAGTGGAAGATTTCTTCATGGAAAATCGTAACTCCTCTCTAAGTAATGATGCAAAATTTGCAATAATTCGATTATCTTCAATTTACGGAAGAAACAAGAATTGACAGAGGAGAAATGATTTCCAGACTAATGTGTGTGTCTGTATGTGCAAGGAAGGAGAAACCTTTTTATGTCTGTTTACTTACTTTACCTTCCTCTCTTGTGTTCTGGAGCTTCGTAGCCATCATCCGATGACTGAGAA</gDNA_template>
            <first_frame> N  S  L  L  K  T  P  L  Q  L  F  S  S  L  F  F  V  V  K  *  R  F  D  L  W  I  S  R  L  Y  L  S  S  S  L  G  L  G  L  Q  R  S  Y  L  L  L  K  V  I  N  H  H  S  S  L  T  C  T  C  F  V  F  N  M  F  T  Y  P  L  *  L  T  K  I  T  L  L  R  K  W  K  I  S  S  W  K  I  V  T  P  L  *  V  M  M  Q  N  L  Q  *  F  D  Y  L  Q  F  T  E  E  T  R  I  D  R  G  E  M  I  S  R  L  M  C  V  S  V  C  A  R  K  E  K  P  F  Y  V  C  L  L  T  L  P  S  S  L  V  F  W  S  F  V  A  I  I  R  *  L  R  </first_frame>
            <second_frame>  I  V  Y  L  K  L  H  C  N  S  F  R  P  F  S  S  *  *  S  K  G  L  T  F  G  S  L  V  S  I  Y  L  L  H  *  D  *  G  Y  K  G  R  I  F  C  *  R  *  L  I  I  I  H  H  L  L  V  L  V  L  F  S  I  C  L  H  I  H  S  N  *  Q  K  *  L  Y  *  G  S  G  R  F  L  H  G  K  S  *  L  L  S  K  *  *  C  K  I  C  N  N  S  I  I  F  N  L  R  K  K  Q  E  L  T  E  E  K  *  F  P  D  *  C  V  C  L  Y  V  Q  G  R  R  N  L  F  M  S  V  Y  L  L  Y  L  P  L  L  C  S  G  A  S  *  P  S  S  D  D  *  E </second_frame>
            <third_frame>   *  F  T  *  N  S  T  A  T  L  F  V  P  F  L  R  S  K  V  K  V  *  P  L  D  L  S  S  L  S  I  F  F  I  R  I  R  A  T  K  V  V  S  S  V  E  G  N  *  S  S  F  I  T  Y  L  Y  L  F  C  F  Q  Y  V  Y  I  S  T  L  I  N  K  N  N  F  I  K  E  V  E  D  F  F  M  E  N  R  N  S  S  L  S  N  D  A  K  F  A  I  I  R  L  S  S  I  Y  G  R  N  K  N  *  Q  R  R  N  D  F  Q  T  N  V  C  V  C  M  C  K  E  G  E  T  F  L  C  L  F  T  Y  F  T  F  L  S  C  V  L  E  L  R  S  H  H  P  M  T  E   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02SLm0042B19.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="+" PGL_start="105280" PGL_stop="105767"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="105280" e_stop="105767"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="105280" e_stop="105767" e_length="488"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="105280" stop="105753"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U594091" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="105341" stop="105767"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U594092" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCAAGCTGGATGTAGCCCTCTCTCAGAGGGAAGTGTTCTAGTCTCACCTAGTTAAAACACATACTGAAGATTCATGTGGTTGACAACGCTTCATTTGGTGAAACTGACATTCTTTATCCTTGACCATCATTAGCATGGTGGGAGGATACATTGTGCAGCTGAGAACGTGTCAGGCGTTAGGCGAAATACGTTCATTGAAGCACAAGCTTCAACCTGCTGGAGCAAAGATGGTTTCTGATTTACAAGTTGTGATCTCCATTCTGAATGCTATATGGTGCTTTACTGTTAACAGAGCCTTGTTGGCTTTCGGGGGAAGAATAGGGAGGGTTGCCTCGTGCAATTTTGAGCTTCTATAGCGGTTACTGCACTTTTAAGTTTGATAACTTAGTTGTTACCATTTTTGCTGTACAATATTGACTTGACTACAGATTAGCGATTGATATATGATGGTATGAAAGGTTACTGTTAGTTGATACATTTGGTTTCTT</gDNA_template>
            <first_frame> S  S  W  M  *  P  S  L  R  G  K  C  S  S  L  T  *  L  K  H  I  L  K  I  H  V  V  D  N  A  S  F  G  E  T  D  I  L  Y  P  *  P  S  L  A  W  W  E  D  T  L  C  S  *  E  R  V  R  R  *  A  K  Y  V  H  *  S  T  S  F  N  L  L  E  Q  R  W  F  L  I  Y  K  L  *  S  P  F  *  M  L  Y  G  A  L  L  L  T  E  P  C  W  L  S  G  E  E  *  G  G  L  P  R  A  I  L  S  F  Y  S  G  Y  C  T  F  K  F  D  N  L  V  V  T  I  F  A  V  Q  Y  *  L  D  Y  R  L  A  I  D  I  *  W  Y  E  R  L  L  L  V  D  T  F  G  F   </first_frame>
            <second_frame>  Q  A  G  C  S  P  L  S  E  G  S  V  L  V  S  P  S  *  N  T  Y  *  R  F  M  W  L  T  T  L  H  L  V  K  L  T  F  F  I  L  D  H  H  *  H  G  G  R  I  H  C  A  A  E  N  V  S  G  V  R  R  N  T  F  I  E  A  Q  A  S  T  C  W  S  K  D  G  F  *  F  T  S  C  D  L  H  S  E  C  Y  M  V  L  Y  C  *  Q  S  L  V  G  F  R  G  K  N  R  E  G  C  L  V  Q  F  *  A  S  I  A  V  T  A  L  L  S  L  I  T  *  L  L  P  F  L  L  Y  N  I  D  L  T  T  D  *  R  L  I  Y  D  G  M  K  G  Y  C  *  L  I  H  L  V  S  </second_frame>
            <third_frame>   K  L  D  V  A  L  S  Q  R  E  V  F  *  S  H  L  V  K  T  H  T  E  D  S  C  G  *  Q  R  F  I  W  *  N  *  H  S  L  S  L  T  I  I  S  M  V  G  G  Y  I  V  Q  L  R  T  C  Q  A  L  G  E  I  R  S  L  K  H  K  L  Q  P  A  G  A  K  M  V  S  D  L  Q  V  V  I  S  I  L  N  A  I  W  C  F  T  V  N  R  A  L  L  A  F  G  G  R  I  G  R  V  A  S  C  N  F  E  L  L  *  R  L  L  H  F  *  V  *  *  L  S  C  Y  H  F  C  C  T  I  L  T  *  L  Q  I  S  D  *  Y  M  M  V  *  K  V  T  V  S  *  Y  I  W  F  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0042B19.2" strand="+"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="105387" stop="105635"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>246</number_coding_nucleotides>
                  <number_encoded_amino_acids>82</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>HSLSLTIISMVGGYIVQLRTCQALGEIRSLKHKLQPAGAKMVSDLQVVISILNAIWCFTVNRALLAFGGRIGRVASCNFELL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="15" PGL_strand="-" PGL_start="108448" PGL_stop="106226"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="108448" e_stop="108059"/>
            <exon e_start="107984" e_stop="107825"/>
            <exon e_start="107691" e_stop="107629"/>
            <exon e_start="106887" e_stop="106843"/>
            <exon e_start="106740" e_stop="106226"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.342" acc_prob="0.409" e_score="1.000"/>
          <exon-intron don_prob="0.875" acc_prob="0.008" e_score="1.000"/>
          <exon-intron don_prob="0.562" acc_prob="0.950" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="0.990"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="108448" e_stop="108059" e_length="390"/>
          </exon>
          <intron i_serial="1" don_prob="0.342" acc_prob="0.409">
            <gDNA_intron_boundary i_start="108058" i_stop="107985" i_length="74"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="107984" e_stop="107825" e_length="160"/>
          </exon>
          <intron i_serial="2" don_prob="0.875" acc_prob="0.008">
            <gDNA_intron_boundary i_start="107824" i_stop="107692" i_length="133"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="107691" e_stop="107629" e_length="63"/>
          </exon>
          <intron i_serial="3" don_prob="0.562" acc_prob="0.950">
            <gDNA_intron_boundary i_start="107628" i_stop="106888" i_length="741"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="106887" e_stop="106843" e_length="45"/>
          </exon>
          <intron i_serial="4" don_prob="1.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="106842" i_stop="106741" i_length="102"/>
          </intron>
          <exon e_serial="5" e_score="0.990">
            <gDNA_exon_boundary e_start="106740" e_stop="106226" e_length="515"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108448" stop="108059"/>
              <exon start="107984" stop="107825"/>
              <exon start="107691" stop="107629"/>
              <exon start="106887" stop="106843"/>
              <exon start="106740" stop="106226"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U575690" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CAATTATGAAGCGGAAGAGGCAATCTAAAATAACAGATTTGAACTTCGATGTGTTAAAGCACGTTATGTATCATGTTGCTGTGTCACCTGATGGAGCTGGAAATCTTGCCCGAACTTTATCAGTGTAAGTATCGTTTCCGATATCTCTTTCTTGTTTATGTTTCTTAATTCTAGATAACTTTTGACCTTATTTACCGTGACTTCTATGTCCTTTCCTATTCTTTTGATGTGATTAACTACTCTTTCTGTTATTAACTTTGAAATTGAGTTCCTGTCAAAGCTGACGTATCATCTATGTGTATCAACTTCTGCCTTGTATATGACCCAACATATGTCCTATGGCTGTCTACAATTTCGTGTTTTACAACATCAAAAGGGGTCCAGTAAAAG : ACTGTTCAAGGAACTTGCTGATGATTCTGACATCTTAAAAGCCGCGGCGTTTGATCAAGTTAACCTTTCTGGTATTCATGAATCATTCTGGCGACCTGCTGGGATGTTATGTAGGTGCTTACCAACAGGAAATCCAACTGCTTTCAACACAATAAGAAAG : AATGCAGAGATATTGAATGTTTCTTATGAGATTCTCAAGAGGGACATGTTCCGTGGAAAAATG : ATTCTTTTGGTAAGAAGCACAGCTCTTGAAATTGCAAATACCAGG : TGAAACTTGTGGTATAATGCATGTACAACCAGGACTGCTCAAGTACTTGTGATGCCGTTGATGCTCAAATCGAAACTATTGAGCAGTTTTTAGAAATGTTGAAGGCTGTATTGAAAGTAATGAGAAGTCAGATTGCTCAATGAGGTTGAGCTGATGCCTAGCTTTTTGATGCCGCATGAGCGTTTTGTGTTAAAACATCTTCAAAGACGAGGACTCAGACAAAATTGAAGTTCAGCATTTGGGGCTTTAAATATGGGTTACTAAGCTTGCTGAGTGGTTAAAATCCTCTTGTCGTTATTGTCAGTGAGATGGTGGCAGTTATATCAAACATAAGTGTCACTTGTAACTTGCCAATTTTTGTGCGCTCTGTGTATCTTTGTTTCTACCGTTTTTCTTTTAACATATTATGGTGTCAGACTGAAATATCTCAGTTCAGAGTGTATGTAAATCTATTTGCAAACACTTCCATCTTTGCGTAGATGTGATCGATGGATGATAAAGCCTTATAATGTGGA</gDNA_template>
            <first_frame> Q  L  *  S  G  R  G  N  L  K  *  Q  I  *  T  S  M  C  *  S  T  L  C  I  M  L  L  C  H  L  M  E  L  E  I  L  P  E  L  Y  Q  C  K  Y  R  F  R  Y  L  F  L  V  Y  V  S  *  F  *  I  T  F  D  L  I  Y  R  D  F  Y  V  L  S  Y  S  F  D  V  I  N  Y  S  F  C  Y  *  L  *  N  *  V  P  V  K  A  D  V  S  S  M  C  I  N  F  C  L  V  Y  D  P  T  Y  V  L  W  L  S  T  I  S  C  F  T  T  S  K  G  V  Q  *  K  :  T  V  Q  G  T  C  *  *  F  *  H  L  K  S  R  G  V  *  S  S  *  P  F  W  Y  S  *  I  I  L  A  T  C  W  D  V  M  *  V  L  T  N  R  K  S  N  C  F  Q  H  N  K  K   : E  C  R  D  I  E  C  F  L  *  D  S  Q  E  G  H  V  P  W  K  N   : D  S  F  G  K  K  H  S  S  *  N  C  K  Y  Q   : V  K  L  V  V  *  C  M  Y  N  Q  D  C  S  S  T  C  D  A  V  D  A  Q  I  E  T  I  E  Q  F  L  E  M  L  K  A  V  L  K  V  M  R  S  Q  I  A  Q  *  G  *  A  D  A  *  L  F  D  A  A  *  A  F  C  V  K  T  S  S  K  T  R  T  Q  T  K  L  K  F  S  I  W  G  F  K  Y  G  L  L  S  L  L  S  G  *  N  P  L  V  V  I  V  S  E  M  V  A  V  I  S  N  I  S  V  T  C  N  L  P  I  F  V  R  S  V  Y  L  C  F  Y  R  F  S  F  N  I  L  W  C  Q  T  E  I  S  Q  F  R  V  Y  V  N  L  F  A  N  T  S  I  F  A  *  M  *  S  M  D  D  K  A  L  *  C  G </first_frame>
            <second_frame>  N  Y  E  A  E  E  A  I  *  N  N  R  F  E  L  R  C  V  K  A  R  Y  V  S  C  C  C  V  T  *  W  S  W  K  S  C  P  N  F  I  S  V  S  I  V  S  D  I  S  F  L  F  M  F  L  N  S  R  *  L  L  T  L  F  T  V  T  S  M  S  F  P  I  L  L  M  *  L  T  T  L  S  V  I  N  F  E  I  E  F  L  S  K  L  T  Y  H  L  C  V  S  T  S  A  L  Y  M  T  Q  H  M  S  Y  G  C  L  Q  F  R  V  L  Q  H  Q  K  G  S  S  K  R :   L  F  K  E  L  A  D  D  S  D  I  L  K  A  A  A  F  D  Q  V  N  L  S  G  I  H  E  S  F  W  R  P  A  G  M  L  C  R  C  L  P  T  G  N  P  T  A  F  N  T  I  R  K  :  N  A  E  I  L  N  V  S  Y  E  I  L  K  R  D  M  F  R  G  K  M  :  I  L  L  V  R  S  T  A  L  E  I  A  N  T  R  :  *  N  L  W  Y  N  A  C  T  T  R  T  A  Q  V  L  V  M  P  L  M  L  K  S  K  L  L  S  S  F  *  K  C  *  R  L  Y  *  K  *  *  E  V  R  L  L  N  E  V  E  L  M  P  S  F  L  M  P  H  E  R  F  V  L  K  H  L  Q  R  R  G  L  R  Q  N  *  S  S  A  F  G  A  L  N  M  G  Y  *  A  C  *  V  V  K  I  L  L  S  L  L  S  V  R  W  W  Q  L  Y  Q  T  *  V  S  L  V  T  C  Q  F  L  C  A  L  C  I  F  V  S  T  V  F  L  L  T  Y  Y  G  V  R  L  K  Y  L  S  S  E  C  M  *  I  Y  L  Q  T  L  P  S  L  R  R  C  D  R  W  M  I  K  P  Y  N  V   </second_frame>
            <third_frame>   I  M  K  R  K  R  Q  S  K  I  T  D  L  N  F  D  V  L  K  H  V  M  Y  H  V  A  V  S  P  D  G  A  G  N  L  A  R  T  L  S  V  *  V  S  F  P  I  S  L  S  C  L  C  F  L  I  L  D  N  F  *  P  Y  L  P  *  L  L  C  P  F  L  F  F  *  C  D  *  L  L  F  L  L  L  T  L  K  L  S  S  C  Q  S  *  R  I  I  Y  V  Y  Q  L  L  P  C  I  *  P  N  I  C  P  M  A  V  Y  N  F  V  F  Y  N  I  K  R  G  P  V  K   : D  C  S  R  N  L  L  M  I  L  T  S  *  K  P  R  R  L  I  K  L  T  F  L  V  F  M  N  H  S  G  D  L  L  G  C  Y  V  G  A  Y  Q  Q  E  I  Q  L  L  S  T  Q  *  E  R :   M  Q  R  Y  *  M  F  L  M  R  F  S  R  G  T  C  S  V  E  K  * :   F  F  W  *  E  A  Q  L  L  K  L  Q  I  P  G :   E  T  C  G  I  M  H  V  Q  P  G  L  L  K  Y  L  *  C  R  *  C  S  N  R  N  Y  *  A  V  F  R  N  V  E  G  C  I  E  S  N  E  K  S  D  C  S  M  R  L  S  *  C  L  A  F  *  C  R  M  S  V  L  C  *  N  I  F  K  D  E  D  S  D  K  I  E  V  Q  H  L  G  L  *  I  W  V  T  K  L  A  E  W  L  K  S  S  C  R  Y  C  Q  *  D  G  G  S  Y  I  K  H  K  C  H  L  *  L  A  N  F  C  A  L  C  V  S  L  F  L  P  F  F  F  *  H  I  M  V  S  D  *  N  I  S  V  Q  S  V  C  K  S  I  C  K  H  F  H  L  C  V  D  V  I  D  G  *  *  S  L  I  M  W  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0042B19.2" strand="-"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="108216" stop="108059"/>
                    <exon start="107984" stop="107825"/>
                    <exon start="107691" stop="107629"/>
                    <exon start="106887" stop="106843"/>
                    <exon start="106740" stop="106738"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>426</number_coding_nucleotides>
                  <number_encoded_amino_acids>142</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LTTLSVINFEIEFLSKLTYHLCVSTSALYMTQHMSYGCLQFRVLQHQKGSSKRLFKELADDSDILKAAAFDQVNLSGIHESFWRPAGMLCRCLPTGNPTAFNTIRKNAEILNVSYEILKRDMFRGKMILLVRSTALEIANTR*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0042B19.2" strand="-"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="106459" stop="106262"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>195</number_coding_nucleotides>
                  <number_encoded_amino_acids>65</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NPLVVIVSEMVAVISNISVTCNLPIFVRSVYLCFYRFSFNILWCQTEISQFRVYVNLFANTSIFA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 49 chains have been computed
$ 
$ memory statistics:
$ 52768 bytes spliced alignments in total
$ 24 spliced alignments have been stored
$ 2198 bytes was the average size of a spliced alignment
$ 24584 bytes predicted gene locations in total
$ 15 predicted gene locations have been stored
$ 1638 bytes was the average size of a predicted gene location
$ 0 megabytes was the average size of the backtrace matrix
$ 60 backtrace matrices have been allocated
$ 
$ date finished: 2009-07-29 10:49:44
-->
