<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2006-11-17 22:18:04"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-lbVmY/GenomeThreader_SGN_U_tomato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/cxgn-bacpublish-resources-OMR5jX/lycopersicum_combined_unigene_seqs" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-OMR5jX/lycopersicum_combined_unigene_seqs" ref_id="SGN-U326538" ref_strand="+" ref_description="SGN-U326538">
      <seq>ctcgatgaagagacattaatgagaattgttcctttctggagaacgtccctcagagatacaaatactccaagtcaaaagtattacattgatcattttgagatacatcctgttaaggttgtggcaagctttcttccaggggaatcttatgctaaccatagctccacgcaagagacactaagatctttacttcacagtgttataaagatacctcctgtcaaaaatatgaccgtagagctcaatggcatccttgtaactcatgcattggtcactttgcgggagttgtcaattaaatgtgcccaacattattcttggtatgcaatgagagcagtatacattgcaaagggaagtcccttgctgccaccagcttttgcttctatatttgacgacttagcttcatcatctctggatgttttctttgatccttctactggccatcttaatcttcctggcctcacaattggtactttcaaactcattcgtaagtgtattgatggtaaagagttttctggaacaaaaagatactttggcgatctagggaaaacttttaagtcagcaggatcaaatatcctgtttgctgctgtcactgaaatatcagactcggttctgaaaggagcagaagctagtggtttaaatggaatggtgaatggtttccatcaaggaatacttaaattggcaatggaacctacattactggggagtgctttcatggaaggtggccctgatcgaaaaattgggcttgatcgaagtcctgaggttgatgagctatacattga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-lbVmY/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0066K03.2" temp_strand="+" temp_description="C02SLm0066K03.2  submitted_to_sgn_as:C02Mbo0066K03 len=123077">
        <position start="8349" stop="11413"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="8649" g_stop="8762" g_length="114"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="114" r_length="114" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="8763" i_stop="8863" i_length="101">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.652" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="8864" g_stop="8953" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="115" r_stop="204" r_length="90" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="8954" i_stop="9385" i_length="432">
            <donor d_prob="0.868" d_score="1.00"/>
            <acceptor a_prob="0.978" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="9386" g_stop="9492" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="205" r_stop="311" r_length="107" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="9493" i_stop="9572" i_length="80">
            <donor d_prob="0.829" d_score="1.00"/>
            <acceptor a_prob="0.883" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="9573" g_stop="9721" g_length="149"/>
          <reference_exon_boundary r_type="cDNA" r_start="312" r_stop="460" r_length="149" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="9722" i_stop="10572" i_length="851">
            <donor d_prob="0.982" d_score="1.00"/>
            <acceptor a_prob="0.848" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="10573" g_stop="10655" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="461" r_stop="543" r_length="83" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="10656" i_stop="10739" i_length="84">
            <donor d_prob="0.972" d_score="1.00"/>
            <acceptor a_prob="0.752" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="10740" g_stop="10835" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="544" r_stop="639" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="10836" i_stop="10982" i_length="147">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.980" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="10983" g_stop="11105" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="640" r_stop="762" r_length="123" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0066K03.2" gen_strand="+" ref_id="SGN-U326538" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>762</cumulative_length_of_scored_exons>
        <coverage percentage="0.986" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0066K03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U326538" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="8649" e_stop="8762"/>
          <exon e_start="8864" e_stop="8953"/>
          <exon e_start="9386" e_stop="9492"/>
          <exon e_start="9573" e_stop="9721"/>
          <exon e_start="10573" e_stop="10655"/>
          <exon e_start="10740" e_stop="10835"/>
          <exon e_start="10983" e_stop="11105"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCGATGAAGAGACATTAATGAGAATTGTTCCTTTCTGGAGAACGTCCCTCAGAGATACAAATACTCCAAGTCAAAAGTATTACATTGATCATTTTGAGATACATCCTGTTAAGGTGTCTACAGAACTTTGGTTTCACTATGCGCCCCTTCCCAAGGAAGTTATTTTATCACCAAGAATTAACTCGCGTTTTCTATCCTAATAATGTTCCTAAAGGTTGTGGCAAGCTTTCTTCCAGGGGAATCTTATGCTAACCATAGCTCCACGCAAGAGACACTAAGATCTTTACTTCACAGTGTTATAAAGGTCTGATACATAGTACTTCCTCTGTCCCTTTTACGTGACACCATTTGAGTGGAATGGAGTTTAATATGTTAAGATGGCTTCTATATCACATTAAGAGAGTAGTTGAAAAGTTAGTTTCAGAGAGAACACAATATTATAGTTCAAAATTTGAACTCTTGAAACTTGTGATAGTTGAAAACAAAAATGAAGCTAATTTACTGTTCTTGTCATTATATCTATAATTGCTTCCAATAATTATGAATATATAGTGAATTTCTTGCGGAAGCCACTACTAGGATGATGTCAACTTGTCCCAGGATGGAAGGATATAATGTCAATTGATGAGGGAATATTAAAATTCATTACAGTTGTTCATACTTACTATTTGAGCAAAGGTCTTTTCTTGATTATACCTGTGGTGTAACATTCTGTTTCCGATATCTGCATTTTTAGATACCTCCTGTCAAAAATATGACCGTAGAGCTCAATGGCATCCTTGTAACTCATGCATTGGTCACTTTGCGGGAGTTGTCAATTAAATGTGCCCAACATTATTCTTGGTAAGCCTGTGTTTACTTGTTTGGCTTATGTTCTCAATAATTATTGCTCAATAGTAGCTGAAAATTGCCATTCACTCTAGGTATGCAATGAGAGCAGTATACATTGCAAAGGGAAGTCCCTTGCTGCCACCAGCTTTTGCTTCTATATTTGACGACTTAGCTTCATCATCTCTGGATGTTTTCTTTGATCCTTCTACTGGCCATCTTAATCTTCCTGGCCTCACAATTGGTATGCCCATGAAAACTCCGAAATCCTTGGCTTACTGCTTGATGCATCCATGTTTAGACTTAAGATGAGTACTGCTCATTTACGTGACCTGTGCTTCCATGGACAAGCATTTATGTGGCTAATCTCCTTTGATGCAGTGATGCTTTTACGGGGTCTTTTGTTCCAGCCCCTACTGAATTTGCCTTTGCATCAGAATACCAGGAAACGAATACTTCATGTGAAATTTAAGAAAAACTGTGTGTTTAATGGGAGACTATTTGAATATTACTGTCTTCTTATTTTGGGTTAACTTGCCTTTGCAAGGTGTGCTTCTTAGTGGAAATGATCTTGTGTTGGGGGCTGTTTTGGTACGCCATAAATCTTGTCAAAACTGAAACCTTTTTAGCAACATTATCATACTGAAGTGGCGTATTAGGCATAGGCAAGTGAAAACAGCTTGTATGTCAAGGCAAAATTGTGCATTGCTAACTCTGCCCATTTTCTTGAGCGCCTATGACGCAGAAAGTTCTTCGAATTAATGTTTAATGAGATAATTTGTAACTTAATCCAATCCAACCTGATAACTAGATAAATCTAAATCAAGGAGAGTTTTCAAACCATAAAACAGCTCGAACATTTGAATTCCAGTGCAAATAGATTATAGGATGTCAGACTTCTATGCAGTACTTTATACCCAACTCTCATGAGAGTAATGATATCAGCTGCTTTTCCGGTTCAATTTGCTTTATGATGAAGAATTAGTATGACAATCTTTGCTGCAGGTCTCTTGGAATTCACTGGCAAGTATGACTTTTCCCCTTTTATTTATGTATGTTTCCTTATCAAAGTCTCTGCTTACCTTTTGGATGAAGGTACTTTCAAACTCATTCGTAAGTGTATTGATGGTAAAGAGTTTTCTGGAACAAAAAGATACTTTGGCGATCTAGGGAAAACTGTAAGTTATATATTTTTGTTGATTTTTTTGTTCATGGTTGATTTGCAATTGTCAATGACGCTGCAAAGGGTGTTTCATATGCAGTTTAAGTCAGCAGGATCAAATATCCTGTTTGCTGCTGTCACTGAAATATCAGACTCGGTTCTGAAAGGAGCAGAAGCTAGTGGTTTAAATGGAATGGTAAGAACATCTTATCTGATAGCATTACAAATACTGTAACTACTAAGTGCCAACTTGAAGTGTTCAACCTTGATCTAGTGCTAGTTAGGTACTATTTCAGATTGTAATTTGGCTGTCACCCGAATCGATTTGATATGTTCTTTCCAGGTGAATGGTTTCCATCAAGGAATACTTAAATTGGCAATGGAACCTACATTACTGGGGAGTGCTTTCATGGAAGGTGGCCCTGATCGAAAAATTGGGCTTGATCGAAGTCCTGGGGTTGATGAG</genome_strand>
        <mrna_strand>CTCGATGAAGAGACATTAATGAGAATTGTTCCTTTCTGGAGAACGTCCCTCAGAGATACAAATACTCCAAGTCAAAAGTATTACATTGATCATTTTGAGATACATCCTGTTAAG.....................................................................................................GTTGTGGCAAGCTTTCTTCCAGGGGAATCTTATGCTAACCATAGCTCCACGCAAGAGACACTAAGATCTTTACTTCACAGTGTTATAAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACCTCCTGTCAAAAATATGACCGTAGAGCTCAATGGCATCCTTGTAACTCATGCATTGGTCACTTTGCGGGAGTTGTCAATTAAATGTGCCCAACATTATTCTTG................................................................................GTATGCAATGAGAGCAGTATACATTGCAAAGGGAAGTCCCTTGCTGCCACCAGCTTTTGCTTCTATATTTGACGACTTAGCTTCATCATCTCTGGATGTTTTCTTTGATCCTTCTACTGGCCATCTTAATCTTCCTGGCCTCACAATTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACTTTCAAACTCATTCGTAAGTGTATTGATGGTAAAGAGTTTTCTGGAACAAAAAGATACTTTGGCGATCTAGGGAAAACT....................................................................................TTTAAGTCAGCAGGATCAAATATCCTGTTTGCTGCTGTCACTGAAATATCAGACTCGGTTCTGAAAGGAGCAGAAGCTAGTGGTTTAAATGGAATG...................................................................................................................................................GTGAATGGTTTCCATCAAGGAATACTTAAATTGGCAATGGAACCTACATTACTGGGGAGTGCTTTCATGGAAGGTGGCCCTGATCGAAAAATTGGGCTTGATCGAAGTCCTGAGGTTGATGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-OMR5jX/lycopersicum_combined_unigene_seqs" ref_id="SGN-U329310" ref_strand="+" ref_description="SGN-U329310">
      <seq>aacattttcttgtcttaaagctttttctaggaaaaagaataaatagcaagtgcattttgttcatatgagaggataatagatgatccttcccctttcgtttttattccaaatgtatataacaaagcaaaaataaataaatttttttttggtcttcctgtatgcctacacaagaatttagcacagaaactttctacattctattgaacattgtatgaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-lbVmY/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0066K03.2" temp_strand="+" temp_description="C02SLm0066K03.2  submitted_to_sgn_as:C02Mbo0066K03 len=123077">
        <position start="12939" stop="13754"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="13239" g_stop="13454" g_length="216"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="216" r_length="216" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0066K03.2" gen_strand="+" ref_id="SGN-U329310" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>216</cumulative_length_of_scored_exons>
        <coverage percentage="0.960" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0066K03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U329310" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="13239" e_stop="13454"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACATTTTCTTGTCTTAAAGCTTTTTCTAGGAAAAAGAATAAATAGCAAGTGCATTTTGTTCATATGAGAGGATAATAGATGATCCTTCCCCTTTCGTTTTTATTCCAAATGTATATAACAAAGCAAAAATAAATAAATTTTTTTTTGGTCTTCCTGTATGCCTACACAAGAATTTAGCACAGAAACTTTCTACATTCTATTGAACATTGTATGAA</genome_strand>
        <mrna_strand>AACATTTTCTTGTCTTAAAGCTTTTTCTAGGAAAAAGAATAAATAGCAAGTGCATTTTGTTCATATGAGAGGATAATAGATGATCCTTCCCCTTTCGTTTTTATTCCAAATGTATATAACAAAGCAAAAATAAATAAATTTTTTTTTGGTCTTCCTGTATGCCTACACAAGAATTTAGCACAGAAACTTTCTACATTCTATTGAACATTGTATGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-OMR5jX/lycopersicum_combined_unigene_seqs" ref_id="SGN-U332373" ref_strand="+" ref_description="SGN-U332373">
      <seq>ttttatgttgtgagatacaaaaaaatatggcttttgcgatatccaaagagaaaataggcagtgatgatcaagatagtgtcgagacagagagagtaataagtagccaactctatttgaagtcatcgtcccatgaaaatcttgacaaaaatgttgtgctgaggagacttcgtcaccataaatacttgcaaaaggttcgtggaaatttgaagactctattggacagttattcgacaagggattattatgagcacaagtggcttgaacagggcgacgttttctgctccccttagcatatatattttccttcttgtaccaaacatccttacctctctgtctcttgagtttctgtgggcggagcctaaattttgaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-lbVmY/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0066K03.2" temp_strand="+" temp_description="C02SLm0066K03.2  submitted_to_sgn_as:C02Mbo0066K03 len=123077">
        <position start="13664" stop="14633"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="13964" g_stop="14333" g_length="370"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="371" r_length="371" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0066K03.2" gen_strand="+" ref_id="SGN-U332373" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>370</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0066K03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U332373" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="13964" e_stop="14333"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTATGTTGTGAGATACAAAAAAATATGGCTTTTGCGATATCCAAAGAGAAAATAGGCAGTGATGATCAAGATAGTGTCGAGACAGAGAGAGTAATAAGTAGCCAACTCTATTTGAAGTCATCGTCCCATGAAAATCTTGACAAAAATGTTGTGCTGAGGAGACTTCGTCACCATAAATACTTGCAAAAGGTTCGTGGAAATTTGAAGACTCTATTGGACAGTTATTCGACAAGGGATTATTATGAGCACAAGTGGCTTGAACAGGGCGACGTTTTCTGCTCCCCTTAGCATATATATTTCCCTCCTTGTACCAAACATCCTTACCTCTCTGTCTCTTGAGTTTCTGTGGGCGGAGCCTAAA-TTTGAAG</genome_strand>
        <mrna_strand>TTTTATGTTGTGAGATACAAAAAAATATGGCTTTTGCGATATCCAAAGAGAAAATAGGCAGTGATGATCAAGATAGTGTCGAGACAGAGAGAGTAATAAGTAGCCAACTCTATTTGAAGTCATCGTCCCATGAAAATCTTGACAAAAATGTTGTGCTGAGGAGACTTCGTCACCATAAATACTTGCAAAAGGTTCGTGGAAATTTGAAGACTCTATTGGACAGTTATTCGACAAGGGATTATTATGAGCACAAGTGGCTTGAACAGGGCGACGTTTTCTGCTCCCCTTAGCATATATATTTTCCTTCTTGTACCAAACATCCTTACCTCTCTGTCTCTTGAGTTTCTGTGGGCGGAGCCTAAATTTTGAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-OMR5jX/lycopersicum_combined_unigene_seqs" ref_id="SGN-U318820" ref_strand="+" ref_description="SGN-U318820">
      <seq>ccttcgactggagcacgaggacactgacatggactgaaggagtagaaagcgtgtgcgtaaaaagaagcttcttcccgtctcttccatctccgattactagtcgatagctttactgttacgaaaccctgtttttgcagagctgttttggagttgagatatttcaaattttggactcttaattgctgctattttgcttccaatcaaagaaaagaaaagttgcagacgaaggaagagagagaagtaaaagacattaatacatgaaaccagtccacgaagcagatgattgttcactttaattcaatttcgagtcatgggttttcatcacatcattattattagattcgttttctcaattttattgggttggttatcatcgtcagttgaggctactaattcaactaagtgcaatcagtactgtggagctgctggttcttatagtccgcgtgtttcgtatccatttggattctcagagggttgtgggattcgtttagactgtactgaaagtactggagaaatcagaattggggaatatataatacagaatgtgacttcagagactctgatggttaacttctcgatgaattgcagccgtccgattgaggatctacagcaatttgatcgaaccaactttggtatgacttggagaaatggactgcttctacacaattgcaaagtaccgaagagcgaatgtaccataccatcggaaattttaagcacgcgtttgaacatacagtcatgtgattcgaagaaggagaatgtcagttgttattctgaggcgagggcggattatttagattaccagaaattgaagaatacagggtgtggaactgtgatttcgtccatcttgattggtatggataatgatacaatgaagagttctgccatgtttatcgagtttcagacgatggaattagcgtggggattggaaggggattgtgcatgtcataacgatgcaaattgtaccaacgtttctctcccggggaaccgaaaaggtttccggtgccggtgtaaagatggattcgtcggtgatggcttcagcgacggtgatggctgccggaaagtttcaagatgtaatccttccagatacctctctggacgatgtggtggaactaccagaattggtgtgctcgttggagggattattgctggagctggtttaatggctgctttggctgttctttgctactgcattcgaagacgttctgcatctctcaagaaaagaatgagcgcaagacgccttctctctgaagctgcaggcagcaacagtgttcatgtatttcaatacaaagaaattgagagagcaacaaatagtttctctgagaaacagaggctgggcataggggcttatggcacagtttatgctggaaagctccacagtgatgaatgggttgcaattaagaaactaagacaccgggatccggatggtgttgaacaagtgatgaatgaggttaagcttttgtcttctgtaagtcatccaaacttagtccgcctcttgggttgttgtatagaaaatggtgaacagattcttgtttatgaatttatgcccaacggaactctagctcagcatctacagagagaaaggagttcaggacttccgtggacaatacgtctcactatcgcaacagaaactgctcatgcgattgctcaccttcactcagcaatgaatccaccaatataccacagggatatcaaatcaagtaacatactattggattacaacttcaactcaaaagttgcagactttggtctttccagatttggcatgacagatgattcccacatttctacagcaccacaaggtactccaggttatgtggatcctcagtaccatcagaattaccatctttccgataagagtgatgtgtacagcttcggggtggttcttgtagaaatcattacagcaatgaaagtggtgatttctctagatcacacagtgagattaatttggctgcacttgcaatagacagaataggtaagggtcgtgtggatgagatcatcgatccatttctagagccacacagagatgcatggactctatcatcagttcatagagttgcagagcttgcttttagatgccttgcatttcatagggatatgaggccttcaatgacagaagtggcagacgagctggaacagatcaggctcagcagttgggcatcattggaggacaatgtatgcatgacttcatcagtgaattcctcttgctcatctccccgtagtatgagtgagacatcttttcgtagtacaacaactaagaaaggagtagggagtaggaggttgattgttccccagaagatagcgaattcactggcaatcatggaggaaataaaagacagttcccctgtttctgtacaggatccttggttaagtgaagagagtcccccttcaacaaatcgattattaggtaattctggtcgatgatgacttgaaaaaagaagttcgctctaggtagaaaactgagggggatcacctgtaatctatcacctccttttcctgccttctaatctactgagaatatcaaagagtattattagagcacttctctttgtatcaaaatttttattgcttcatacgcagaatatagaatgtgaaatagtatttgcaatgccctggccaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-lbVmY/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0066K03.2" temp_strand="+" temp_description="C02SLm0066K03.2  submitted_to_sgn_as:C02Mbo0066K03 len=123077">
        <position start="23684" stop="77228"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="23984" g_stop="24208" g_length="225"/>
          <reference_exon_boundary r_type="cDNA" r_start="49" r_stop="273" r_length="225" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="24209" i_stop="24420" i_length="212">
            <donor d_prob="0.908" d_score="1.00"/>
            <acceptor a_prob="0.862" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="24421" g_stop="25208" g_length="788"/>
          <reference_exon_boundary r_type="cDNA" r_start="274" r_stop="1061" r_length="788" r_score="0.996"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="25209" i_stop="28266" i_length="3058">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="28267" g_stop="28341" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="1062" r_stop="1136" r_length="75" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="28342" i_stop="28594" i_length="253">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="28595" g_stop="30073" g_length="1479"/>
          <reference_exon_boundary r_type="cDNA" r_start="1137" r_stop="2613" r_length="1477" r_score="0.997"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="30074" i_stop="31170" i_length="1097">
            <donor d_prob="0.000" d_score="0.94"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="31171" g_stop="31185" g_length="15"/>
          <reference_exon_boundary r_type="cDNA" r_start="2614" r_stop="2628" r_length="15" r_score="0.800"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="31186" i_stop="32136" i_length="951">
            <donor d_prob="0.104" d_score="0.00"/>
            <acceptor a_prob="0.274" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="32137" g_stop="32148" g_length="12"/>
          <reference_exon_boundary r_type="cDNA" r_start="2629" r_stop="2640" r_length="12" r_score="0.667"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0066K03.2" gen_strand="+" ref_id="SGN-U318820" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>2594</cumulative_length_of_scored_exons>
        <coverage percentage="0.983" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0066K03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U318820" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="23984" e_stop="24208"/>
          <exon e_start="24421" e_stop="25208"/>
          <exon e_start="28267" e_stop="28341"/>
          <exon e_start="28595" e_stop="30073"/>
          <exon e_start="31171" e_stop="31185"/>
          <exon e_start="32137" e_stop="32148"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCGTGTGCGTAAAAAGAAGCTTCTTCCCGTCTCTTCCATCTCCGATTACTAGTCGATAGCTTTACTGTTACGAAACCCTGTTTTTGCAGAGCTGTTTTGGAGTTGAGATATTTCAAATTTTGGACTCTTAATTGCTGCTATTTTGCTTCCAATCAAAGAAAAGAAAAGTTGCAGACGAAGGAAGAGAGAGAAGTAAAAGACATTAATACATGAAACCAGTCCACGGTACTCTTTACTCCCTACTCTATTTTCCCTTCTATGGATGGAATTCGGAAAATAGCATTTATTGACAAACAATGAACTCCCCACCAACATCAACTGCACCCCCTTAATTTCCTCAATTAATGGTCTTCAACAAGTCAAACTCTTTTTCTATTTTTTTTCCTTCTTTTTCATGGGTAAATTTGCTATCCCTCATTTTCATTTTCTCTTTGCAGAAGCAGATGATTGTTCACTTTAATTCAATTTCGAGTCATGGGTTTTCATCACATCATTATTATTAGATTCGTTTTCTCAATTTTATTGGGTTGGTTATCATCGTCAGTTGAGGCTACTAATTCAACTAAGTGCAATCAGTACTGTGGAGCTGCTGGTTCTTATAGTCCGCGTGTTTCTTATCCATTTGGATTCTCAGAGGGTTGTGGGATTCGTTTAGACTGTACTGAAAGTACTGGAGAAATCAGAATTGGGGAATATATAATACAGAATGTGACTTCAGAGACTCTGATGGTTAACTTCTCGATGAATTGCAGCCGTCCGATTGAGGATCTACAGCAATTTGATCGAACCAACTTTGGTATGACTTGGAGAAATGGACTGCTTCTACACAATTGCAAAGTACCGAAGAGCGAATGTACCATACTATCGGAAATTTTAAGCACGCGTTTGAACATACAGTCATGTGATTCGAAGAAGGAGAATGTCAGTTGTTATTCTGAGGCGAGGGCGGATTATTTAGATTACAAGAAATTGAAGAATACAGGGTGTGGAACTGTGATTTCGTCCATCTTGATTGGTATGGATAATGATACAATGAAGAGTTCTGCCATGTTTATCGAGTTTCAGACGATGGAATTAGCGTGGGGATTGGAAGGGGATTGTGCATGTCATAACGATGCAAATTGTACCAACGTTTCTCTCCCGGGGAACCGAAAAGGTTTCCGGTGCCGGTGTAAAGATGGATTCGTCGGTGATGGCTTCAGCGACGGTGATGGCTGCCGGAAAGGTTAGTTCAATTATTCTTTTCAAATGTTAAAACAGTTCACTGCAACATTATTCACGGTTAAATTGTGAGCATCATCTTAATTTAAATTTTAGAGATAAACACCTTTATTTACCGTGTGTATATATATATATATAAAAAGAGACTAAAAATTTAAATGGATATGTTAAATATAAAGTTTAAAATTTTATTTCACATAACATATGTTTCGTTATAAGTGTTAGTGCTATTAATTTCAATTGAACTCAATAAATTGAGTTTTATTTATATATATTTCGTGACAAGTGTTAACGCTATTAATTTCAATTAAACCAAATAAATTAAGTTTCATCTATAAGGTATAGGTAGATATTTTAAATTTTAGTACTCGGAGACATATCATTAATGGAAATGTCGTCGAACTCAAAATGTCTACTGAATTTGGTAAATGGCAATTCAATAGAGACAACGTTTATTATATTTAGGGGTAAAATTCAAAGTTAATTGCTAGATGGCCTAATTATTGTTTGACTAAGGGCAAAAAGTGACGTGAGAGATGATAAGATGACCAGTAGTTTTTATTATATTTGGTTTGACCAGTAGCAACACGCCACGAAGAAGGGCTGTTGTTAATTTCAATGGAGATTTACATGAATTGACTATGATTAAATTAATGATATTTTAGTGTGATTAAGTTATTTAGGAAATCCAAATATTCCACAACTTGTGTTATATGCGGCTGGTGTAGTCAATAAAGCCTTCTCTTGATTTTGATATGGTCGAATTTTGGGTTCTAAGCTGTCGACTGTTGAAGGTCTACTATATGACCTCCTCATGCGACCTGGGATTTGTTGATATTCTTTTCTTATTTGATTTTATAATTTTCAGTGGTTTTTTATTAACAAATAAAAAAAATTGTTTATAAATAAGTACAGATAAAGAAGATTAGGCTTATCTTATCATTCCTAATGTTATAATGAACTTCTAGTAATTAATGAATATGAAAAAATAGATATTTTATGATAAATTTACTAATGAGAATATCTATACAATGCAAAAATATAAAAACTAAAAAAAGGAAGGTTGAGTTTTCAATCACAAACTACCTTTAACAAATGTATATTTAACTTTTTCACATTACATCAAAAGAATTGAATTTTTTTTGGTTAAAAAATTGACTTTCTGGCCTACTGTGTTCTCCTCACCCTTTCATGTTCACCAATAGTTTCCATTCCCATTATCCTACAAATTAGTTTAGATTAAAATCGAAAGTTATTCACTATTGATTTGGTACATCTATTAAGAAACAATAAATAATAAAAATAATATTTCTATATTAACTTTTGATTTTATTAAATTTAATGTTTTGAAAAATGTATTACATGATAAATAATATTTAATAGGAAGGGTAAAAAGTGACACATAAGATAGATTATCTCTTAATTTTTTAGATTGAATAAGTATGATTAGACAATTATTTTTAGAATAATAAATAACTATTGTTGAAAGAATGAAGTACATAAACGCTTCGAATGAAATTTGATTTTCCTTGAAGAATGTATCATGATTTTTTTCTTATGATAATCGATTCAACCTGTGATAAAAAGATATATTCAGAGTAATATGAAAAATAACTTTCTTTTGTAGTAAACACACCCTTGATCTCTATTCTTTTGGTCATGTGGGACATTGGGACTTGGTCTCACTAACTTTTTCCCCACTAGGTTCCTAACTTCAGCCTGCCAGCATTTTCGCGTATTAGGCTTTAAGGTATTACTCACAGTACCTTCCACTTTCCTTTCTTCTTCCTAGCTCCTGCACATGGATCCAAGACAAATAATATTATTCTTGTGAAGATATTTGATTCCATAAGAAGCATTTTAAAAAGATTCGTGATTTTAAATGCACATTTTTGTGGATATAAAATAATGTTGTTAGCATTAAAATGAGGATTCTAATATATAGCAGTTCTTTTTTTTTTTCAAGATGTGTCATTCTTTCTTCCATATACAAGAAAGGAAATTGTTATAAAGTAGTTGTCGGTACAATGATATTTACTCTCACCAGTCACCAATGTGCCATGTCTGGTCTTTCTTAATAAGATTAAGAACCGATCTGAGTCTTTATGAAACTCTGCCGATTCGCGGTGGTATTGTAACTTATCAAAATGACAAGTTTGAGCTCGATAGCCGGAAATTTTTGTTATTTAATTGAATTGAGCGCTCAAATGAATTCGTTTTTCTTGAAGAGTTGAGCACTTCAATTAGTTTATCTTATCCAACTGCATATTACGTGACACGTTCAAAGATCTTAACTTTTTAAAACAATAAAGAAGCATTTACTTGTTTGTTCTCTGACTCGATGATGGTGAATGTGATTGATGATGTAGATTATCAATTGGACAATCCCCAGGTCAACAGATTTCAATGGTTTTCTTGCCTTGTAAGTTTATTTTAAGGGACAGCACATGGTCCTCATGTTTGAACGGGTGAAAGTCAGAGGATGAACAAGACCTGGATTGTTGATTAATTTCATATTTTATTGTTGAGTAAGCGTTATGACAATGGTAACCCTAACTGGAATCAATGCCAAGTCTTAAATTAGACGTGAAATGAGACAGTTCATTAGTATGCCAGTTTAATTTTTAAATAACTTAGTACTTCACCTGAATCAATGGCATAATTTGCAGGGATGAAAATTGAAACTGATTCATCTTCATTTTACCAGTACATTCCATGTCCAGGAAACTATCTGTAAAGACAACATCTTGACTTTTGGAGATTTAAAAAAACTTAACTGACTAGTGCTTGTGAGATTCCACGTTTTCAGTGAATTGGTTTCATATGTTGATCATGTGCTTTTTCATGACTCTGGTAGGGCATACATTTTCATTCTGACGATGTTCTAAGATATTTTATCTATATATTCAATCAATTCTATTCCCAGAAAAGAAATAATTTTATCCTCTCCCTCCACCCTAAAAATTTTGCCATATGCTCCTTCCTTCTACCTCTTTCTCTACGATTATCTTCAGTATGTCGTCTTTATACTAACTTCTTCTTTATACCTGTCTCTCAATCAGTTTCAAGATGTAATCCTTCCAGATACCTCTCTGGACGATGTGGTGGAACTACCAGAATTGGTGTGCTCGTTGGAGGTATATTTCTTTCTTTTTTGGGTTAACTTATTCAGAAAATGTCACTTCTCAACTCGTTTAATGTAACGAGCTTGCAAGCTTATCACAGATGGGTTCTGTGTTCTTCATATGTACGAAGATTTTTGCACAAGAGCTGCCGACTGATCAGTCATCACTAAACTTCCAAGCCTGCTTACTTTTACAGCCGTTTGATTTAATATAACTAGTGAGTTTGATCTCTTTCCTGGTCAAATGAAATTTCGACCACCTACAGGGATTATTGCTGGAGCTGGTTTAATGGCTGCTTTGGCTGTTCTTTGCTACTGCATTCGAAGACGTTCTGCATCTCTCAAGAAAAGAATGAGCGCAAGACGCCTTCTCTCTGAAGCTGCAGGCAGCAACAGTGTTCATGTATTTCAATACAAAGAAATTGAGAGAGCAACAAATAGTTTCTCTGAGAAACAGAGGCTGGGCATAGGGGCTTATGGCACAGTTTATGCTGGAAAGCTCCACAGTGATGAATGGGTTGCAATTAAGAAACTAAGACACCGGGATCCGGATGGTGTTGAACAAGTGATGAATGAGGTTAAGCTTTTGTCTTCTGTAAGTCATCCAAACTTAGTCCGCCTCTTGGGTTGTTGTATAGAAAATGGTGAACAGATTCTTGTTTATGAATTTATGCCCAACGGAACTCTAGCTCAGCATCTACAGAGAGAAAGGAGTTCAGGACTTCCGTGGACAATACGTCTCACTATCGCAACAGAAACTGCTCATGCGATTGCTCACCTTCACTCAGCAATGAATCCACCAATATACCACAGGGATATCAAATCAAGTAACATACTATTGGATTACAACTTCAACTCAAAAGTTGCAGACTTTGGTCTTTCCAGATTTGGCATGACAGATGATTCCCACATTTCTACAGCACCACAAGGTACTCCAGGTTATGTGGATCCTCAGTACCATCAGAATTACCATCTTTCCGATAAGAGTGATGTGTACAGCTTCGGGGTGGTTCTTGTAGAAATCATTACAGCAATGAAAGTGGTTGATTTCTCTAGATCACACAGTGAGATTAATTTGGCTGCACTTGCAATAGACAGAATAGGTAAGGGTCGTGTGGATGAGATCATCGATCCATTTCTAGAGCCACACAGAGATGCATGGACTCTATCATCAGTTCATAGAGTTGCAGAGCTTGCTTTTAGATGCCTTGCATTTCATAGGGATATGAGGCCTTCAATGACAGAAGTGGCAGACGAGCTGGAACAGATCAGGCTCAGCAGTTGGGCATCATTGGAGGACAATGTATGCATGACTTCATCAGTGAATTCCTCTTGCTCATCTCCCCGTAGTATGAGTGAGACATCTTTTCGTAGTACAACAACTAAGAAAGGAGTAGGGAGTAGGAGGTTGATTGTTCCCCAGAAGATAGCGAATTCACTGGCAATCATGGAGGAAATAAAAGACAGTTCCCCTGTTTCTGTACAGGATCCTTGGTTAAGTGAAGAGAGTCCCCCTTCAACAAATCGATTATTAGGTAATTCTGGTCGATGATGACTTGAAAAAAGAAGTTCGCTCTAGGTAGAAAACTGAGGGGGATCACCTGTAATCTATCACCTCCTTTTCCTGCCTTCTAATCTACTGAGAATATCAAAGAGTATTATTAGAGCACTTCTCTTTGTATCAAAATTTTTATTGCTTCATACGCAGAATTATAGAATGTGAAATAGTATTTGCAATGCCATGAATTTGAATCGTTGTGTTTCCTGTTATTTACAACGACTATAATCCTACATCATACATCATCTTCAAGAATTTGACTACCCTGACATGTTAAATAATTTATCAATACATATTATATAACAGGATTAATTGTTACACTAATAGAATTGATCATGCTTTGAATTTAGCTAAACACAGATCAAACTTAATTTGCAAATAACAACAATGAAAAATTGTATGACAAGCAATAAACTCTTCAAGATTTTTGAGGTTCAGGTCCTAAAATACCATTGACTACAGCTCCGGCAATCAAAACTCCGACAAATTCAGCTCCGGCCACCGCTCCAGCTTGCGCCAACCCACCGAAACTTACTGTACTCTCGATCTTCTCCTCCGCTGCTTCAATCCCCTTCTCAGCCGTCAGTAATCCTTTCTCCGCCGCTTCAATTCCCTTCTCTGCCGCTGCAATTCCCTTGTCTGCCGCCTCGAATCCCTCCTTCACTAATTCTTCTGCCTCATCTTCTACTTTCTTAAGCTTCTTTCTCAGTCCAAAGAGGCCAATGTCCGCAGCCTTGGACGGCATCTCCAGCGCTTTCACTACCGTTGTCGCCGTCACCAGAGAGATCAACTGCCTCCGCCCCCGGAGAGCCACCGCTGCCTGTTTGGTAGGGGGATTTGTGTTTGCATTTAGCACACAACGGGGTGGGTAAGTCCTTACTGTAAGTGAAGTAGTTGTGGAAGACATGGCTATGCTCTCTGTACAATCAAAATGAAGTCTGCACTCCTTGACACCACAATCACAAAGAAGTGTGTGGACTGATTTTTTTTGAACGGACAAGAGAAATACAAATAAATAAATTAATTAAAACTCGGACCAGAAAATTAAAAATAAATGTTATTGGCTTCTTTTACAAGAGTTTTTGGCTAAAATATTCCTTAACCATGACTCAGATATAATGTACACCTTGATATTATCTAAGTGAGTAAAAAATATTTTTATACTATCCAAAAAATAACAAGAATCAACCTTTAACATATTTTTGTTACCAAACTGATTGAACCAATGAAAAAATATATTTTTTTAATTTAATCACGTCTTGGCGACGAAAAGATTAAAGTTACCTAAAAAAAATAAGAGTATGGATAGGAAATGAACCTTGAATATAAATTTCAAGTGTTGTTAATTTATAGAGTATGTTTTTTGCATCATCAAGTAAATTGACTTGCAATACATAAATTTTAAAATATTCACATATTACGTTCCGAATGTTAGAAAGATTATGTAAAAAATAATTTCAAATATATCACATCCAACTATTCAGAGATTTTCTTTAGTAAAATGTTGAGGGGTATATAATATATATATATATACAAAGTTCATATTTTATACAATGTATAGAAATGCTGGAAATTTAGTGAAATTACGTATGTGTAGTTATTAAAATGAAAAAATAATTATTTTATTTGAAATTTTTTAAGTTGGAACAGTATTTGTTTTTTCCAAAGAATATTTAGAATTTGAACATATTTTGTCTGAATATAATTTAAAACCTCAATTTCAAAAAATTTAAAAAAGCACCTAACTTGATTTGCTTCACCATATGTACATATATTAGTTCAACTTAACACACTTTTTGTTGGGGCGAGTTTCTTTTAAAAAAATAGACAAAAGGATAAATCTTGCAACTTTTTCGATAGTTTAGAAATGTTTTTTGTTCATTTATATAACACAAAAATGTACTTTAAGTTTTGATAATATTTTAGAGATGATTTTGGCCAAAAACTCACTTTTACAACTTCTAATTATTATTTTTTCATTGGGCAACTTTCACATATAGTAAATAAAAAATTCATATTTGTATGCTATAGCAAAGATTGCATAATTGCGCTCTATAGCAAACATAGAAACTGTATAATTTGTTATACATATACAGTTGAAGCAAATTGTATAAGACAAGTGTATAAAACAAGAAAGAGAAAGACACTTGGACAGAGAACTGTATAAAAACGAAGTGTATAAAACGAATTGTATTATTATAAATGTATAGAACGATTATATACAATTTGAATTTGTATAAAATGGGAAAGAGAGAAAGACAA</genome_strand>
        <mrna_strand>GCGTGTGCGTAAAAAGAAGCTTCTTCCCGTCTCTTCCATCTCCGATTACTAGTCGATAGCTTTACTGTTACGAAACCCTGTTTTTGCAGAGCTGTTTTGGAGTTGAGATATTTCAAATTTTGGACTCTTAATTGCTGCTATTTTGCTTCCAATCAAAGAAAAGAAAAGTTGCAGACGAAGGAAGAGAGAGAAGTAAAAGACATTAATACATGAAACCAGTCCACG....................................................................................................................................................................................................................AAGCAGATGATTGTTCACTTTAATTCAATTTCGAGTCATGGGTTTTCATCACATCATTATTATTAGATTCGTTTTCTCAATTTTATTGGGTTGGTTATCATCGTCAGTTGAGGCTACTAATTCAACTAAGTGCAATCAGTACTGTGGAGCTGCTGGTTCTTATAGTCCGCGTGTTTCGTATCCATTTGGATTCTCAGAGGGTTGTGGGATTCGTTTAGACTGTACTGAAAGTACTGGAGAAATCAGAATTGGGGAATATATAATACAGAATGTGACTTCAGAGACTCTGATGGTTAACTTCTCGATGAATTGCAGCCGTCCGATTGAGGATCTACAGCAATTTGATCGAACCAACTTTGGTATGACTTGGAGAAATGGACTGCTTCTACACAATTGCAAAGTACCGAAGAGCGAATGTACCATACCATCGGAAATTTTAAGCACGCGTTTGAACATACAGTCATGTGATTCGAAGAAGGAGAATGTCAGTTGTTATTCTGAGGCGAGGGCGGATTATTTAGATTACCAGAAATTGAAGAATACAGGGTGTGGAACTGTGATTTCGTCCATCTTGATTGGTATGGATAATGATACAATGAAGAGTTCTGCCATGTTTATCGAGTTTCAGACGATGGAATTAGCGTGGGGATTGGAAGGGGATTGTGCATGTCATAACGATGCAAATTGTACCAACGTTTCTCTCCCGGGGAACCGAAAAGGTTTCCGGTGCCGGTGTAAAGATGGATTCGTCGGTGATGGCTTCAGCGACGGTGATGGCTGCCGGAAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCAAGATGTAATCCTTCCAGATACCTCTCTGGACGATGTGGTGGAACTACCAGAATTGGTGTGCTCGTTGGAG.............................................................................................................................................................................................................................................................GGATTATTGCTGGAGCTGGTTTAATGGCTGCTTTGGCTGTTCTTTGCTACTGCATTCGAAGACGTTCTGCATCTCTCAAGAAAAGAATGAGCGCAAGACGCCTTCTCTCTGAAGCTGCAGGCAGCAACAGTGTTCATGTATTTCAATACAAAGAAATTGAGAGAGCAACAAATAGTTTCTCTGAGAAACAGAGGCTGGGCATAGGGGCTTATGGCACAGTTTATGCTGGAAAGCTCCACAGTGATGAATGGGTTGCAATTAAGAAACTAAGACACCGGGATCCGGATGGTGTTGAACAAGTGATGAATGAGGTTAAGCTTTTGTCTTCTGTAAGTCATCCAAACTTAGTCCGCCTCTTGGGTTGTTGTATAGAAAATGGTGAACAGATTCTTGTTTATGAATTTATGCCCAACGGAACTCTAGCTCAGCATCTACAGAGAGAAAGGAGTTCAGGACTTCCGTGGACAATACGTCTCACTATCGCAACAGAAACTGCTCATGCGATTGCTCACCTTCACTCAGCAATGAATCCACCAATATACCACAGGGATATCAAATCAAGTAACATACTATTGGATTACAACTTCAACTCAAAAGTTGCAGACTTTGGTCTTTCCAGATTTGGCATGACAGATGATTCCCACATTTCTACAGCACCACAAGGTACTCCAGGTTATGTGGATCCTCAGTACCATCAGAATTACCATCTTTCCGATAAGAGTGATGTGTACAGCTTCGGGGTGGTTCTTGTAGAAATCATTACAGCAATGAAAGTGG-TGATTTCTCTAGATCACACAGTGAGATTAATTTGGCTGCACTTGCAATAGACAGAATAGGTAAGGGTCGTGTGGATGAGATCATCGATCCATTTCTAGAGCCACACAGAGATGCATGGACTCTATCATCAGTTCATAGAGTTGCAGAGCTTGCTTTTAGATGCCTTGCATTTCATAGGGATATGAGGCCTTCAATGACAGAAGTGGCAGACGAGCTGGAACAGATCAGGCTCAGCAGTTGGGCATCATTGGAGGACAATGTATGCATGACTTCATCAGTGAATTCCTCTTGCTCATCTCCCCGTAGTATGAGTGAGACATCTTTTCGTAGTACAACAACTAAGAAAGGAGTAGGGAGTAGGAGGTTGATTGTTCCCCAGAAGATAGCGAATTCACTGGCAATCATGGAGGAAATAAAAGACAGTTCCCCTGTTTCTGTACAGGATCCTTGGTTAAGTGAAGAGAGTCCCCCTTCAACAAATCGATTATTAGGTAATTCTGGTCGATGATGACTTGAAAAAAGAAGTTCGCTCTAGGTAGAAAACTGAGGGGGATCACCTGTAATCTATCACCTCCTTTTCCTGCCTTCTAATCTACTGAGAATATCAAAGAGTATTATTAGAGCACTTCTCTTTGTATCAAAATTTTTATTGCTTCATACGCAGAA-TATAGAATGTGAAATAGTATTTGCAATGCCCTGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAAAAAAAAAAAAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-OMR5jX/lycopersicum_combined_unigene_seqs" ref_id="SGN-U317612" ref_strand="+" ref_description="SGN-U317612">
      <seq>acacacttctttgtgattgtggtgtcaaggagtgcagacttcattttgattgtacagagagcatagccatgtcttccacaactacttcacttacagtaaggacttacccaccccgttgtgtgctaaatgcaaacacaaatccccctaccaaacaggcagcggtggctctccgggggcggaggcagttgatctctctggtgacggcgacaacggtagtgaaagcgctggagatgccgtccaaggctgcggacattggcctctttggactgagaaagaagcttaagaaagtagaagatgaggcagaagaattagtgaaggagggattcgaggcggcagacaagggaattgcagcggcagagaagggaattgaagcggcggagaaaggattactgacggctgagaaggggattgaagcagcggaggagaagatcgagagtacagtaagtttcggtgggttggcgcaagctggagcggtggccggagctgaatttgtcggagttttgattgccggagctgtagtcaatggtattttaggacctgaacctcaaaaatcttgaagagtttattgcttgtcatacaatttttcattgttgttatttgcaaattaagtttgatctgtgtttagctaaattcaaagcatgatcaattctattagtgtaacaattaatcctgttatataatatgtattgataaattaaaaaaaaaaaagggtagtcaaattcttgaagatgatgtatgatgtaggattatagtcgttgtaataacaggaaacacaacgattcaaattcatggcattgcaaatactatttcacattctataattctgcgtatgaagcaataaaaatttga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-lbVmY/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0066K03.2" temp_strand="-" temp_description="C02SLm0066K03.2  submitted_to_sgn_as:C02Mbo0066K03 len=123077">
        <position start="31161" stop="29710"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30861" g_stop="30010" g_length="852"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="849" r_length="849" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0066K03.2" gen_strand="-" ref_id="SGN-U317612" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>852</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0066K03.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U317612" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30861" e_stop="30010"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACACACTTCTTTGTGATTGTGGTGTCAAGGAGTGCAGACTTCATTTTGATTGTACAGAGAGCATAGCCATGTCTTCCACAACTACTTCACTTACAGTAAGGACTTACCCACCCCGTTGTGTGCTAAATGCAAACACAAATCCCCCTACCAAACAGGCAGCGGTGGCTCTCCGGGGGCGGAGGCAGTTGATCTCTCTGGTGACGGCGACAACGGTAGTGAAAGCGCTGGAGATGCCGTCCAAGGCTGCGGACATTGGCCTCTTTGGACTGAGAAAGAAGCTTAAGAAAGTAGAAGATGAGGCAGAAGAATTAGTGAAGGAGGGATTCGAGGCGGCAGACAAGGGAATTGCAGCGGCAGAGAAGGGAATTGAAGCGGCGGAGAAAGGATTACTGACGGCTGAGAAGGGGATTGAAGCAGCGGAGGAGAAGATCGAGAGTACAGTAAGTTTCGGTGGGTTGGCGCAAGCTGGAGCGGTGGCCGGAGCTGAATTTGTCGGAGTTTTGATTGCCGGAGCTGTAGTCAATGGTATTTTAGGACCTGAACCTCAAAAATCTTGAAGAGTTTATTGCTTGTCATACAATTTTTCATTGTTGTTATTTGCAAATTAAGTTTGATCTGTGTTTAGCTAAATTCAAAGCATGATCAATTCTATTAGTGTAACAATTAATCCTGTTATATAATATGTATTGATAAATTATTTAACATGTCAGGGTAGTCAAATTCTTGAAGATGATGTATGATGTAGGATTATAGTCGTTGTAAATAACAGGAAACACAACGATTCAAATTCATGGCATTGCAAATACTATTTCACATTCTATAATTCTGCGTATGAAGCAATAAAAATTTTGA</genome_strand>
        <mrna_strand>ACACACTTCTTTGTGATTGTGGTGTCAAGGAGTGCAGACTTCATTTTGATTGTACAGAGAGCATAGCCATGTCTTCCACAACTACTTCACTTACAGTAAGGACTTACCCACCCCGTTGTGTGCTAAATGCAAACACAAATCCCCCTACCAAACAGGCAGCGGTGGCTCTCCGGGGGCGGAGGCAGTTGATCTCTCTGGTGACGGCGACAACGGTAGTGAAAGCGCTGGAGATGCCGTCCAAGGCTGCGGACATTGGCCTCTTTGGACTGAGAAAGAAGCTTAAGAAAGTAGAAGATGAGGCAGAAGAATTAGTGAAGGAGGGATTCGAGGCGGCAGACAAGGGAATTGCAGCGGCAGAGAAGGGAATTGAAGCGGCGGAGAAAGGATTACTGACGGCTGAGAAGGGGATTGAAGCAGCGGAGGAGAAGATCGAGAGTACAGTAAGTTTCGGTGGGTTGGCGCAAGCTGGAGCGGTGGCCGGAGCTGAATTTGTCGGAGTTTTGATTGCCGGAGCTGTAGTCAATGGTATTTTAGGACCTGAACCTCAAAAATCTTGAAGAGTTTATTGCTTGTCATACAATTTTTCATTGTTGTTATTTGCAAATTAAGTTTGATCTGTGTTTAGCTAAATTCAAAGCATGATCAATTCTATTAGTGTAACAATTAATCCTGTTATATAATATGTATTGATAAATTA-AAAAAAAAAAAGGGTAGTCAAATTCTTGAAGATGATGTATGATGTAGGATTATAGTCGTTGT-AATAACAGGAAACACAACGATTCAAATTCATGGCATTGCAAATACTATTTCACATTCTATAATTCTGCGTATGAAGCAATAAAAA-TTTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-OMR5jX/lycopersicum_combined_unigene_seqs" ref_id="SGN-U316652" ref_strand="+" ref_description="SGN-U316652">
      <seq>gagggaaaatcaagggcttataaaatttccgcttagagtagctatttctaatcaaagagacgatggctgaggaagcagtaatttcagtaacaagccctacggcggagcaaaaccagaactcggtgaacgccaccatcgaatctggtgttcagggaggcacagaatcaacttgcaacaacaataataataatgcggagagttctgcggttacttctgatgttaaccgtgaaaaatctctggagtacgcggatgagttagtggtaaaaggctccaaggcatctgaagatggagattatggagaagccgtagaatgctttagccgtgccctggaaattcgggtcgcacattttggtgaacttgctcctgaatgtatcaatgcatattataaatatgggtgtgctttgctgtacaaagctcaggatgaggctgatcctttggtttctttgccaaaaaaggacagcgggtctcaacaagattctaatagagacggctctgttaaaagtgttgttagttgtgagtcttctatttcaagcactgctgaacctggtggaagttcgaatggaaaggaaaaagtagaagatgatgctgcagaggaaaacgaagatgaaggagatgaagaagaaagtgatgacgaggacttggctgaaggtgatgaggatgaaactgacctggatttagcctggaaactgttagatgttgcaagggcaattgctgaaaagcacgctggtgacacaatggaaaaagtggatgtattatcagctttggctgaggtagccttggaaagagaggatattgaaacttcccttagtgattacctgaaggcattatccattttggaacgcttggttgaacctgacagtcgccatattgctgcgctcaactttaggatatgcttatgcctggaaattggttctaagcatcaggaagccataccatactgccaaaaagctattttaacttgcaagtcgcggctgcagagactcactgaggaaataaagcttttgtcagaatcaacagaaagattagctactaccgatgtagatcagattgcgagacagtcttccagtatatcacagtctgactctgtatctgctaaagaagctgaagttgaaacgctcactgaactttctgcagaattggagaagaagcttgaagatttgcagcagtgtatgtcaaatccatcatctatcctctccgatattttgggaatggtgtctgcgaaagcaagaagtctagagaatgctgatgcttctgtagctgtgaactcctcacagatgggtgttggtaccagtggtagcggaagttttgactctccaactgtttccactgcccacacaaatggtgcagctggaataacccatcttggagtagttggaagaggagtcaagagggtgcatctaaacacaaccacagaatctagtccagcgaaaaaacctgcatctgagcagccgtcagataatggagatggcactgcctcttaaagcatgtattgttggtgcttcaattaagttacggttaacatttcaatttagcttattgataacattggtggattaccttagtttgttgcattctctgttggttagctgggaagtgtgttgccacagatcgcatcagtttatttccttaaattaattaccttgtatgcatgttgactattcaaaaaaaaaaaaaaaaaatataaactttagattcttaaaaacaaagctgaattatatggaggcaaataagtctatggtgaagttggttgctttcttgataattcttgtatcatcatgctttcaatctctcactgctcaagatttggaaatcgaagttagcgatggcttaaatgtattgcaagtacatgatgtgtctcaatctttttgtccaggtgtgacaaaggaaagttggccagaacttcttggaacaccagctaagtttgcaaagcaaataattcaaaaggaaaatccaaaattaacaaatgttgaaactctactgaatggttcagcttttacagaagatttgagatgcaatagagttcgtctttttgtaaatttattggacattgttgtacaaactcccaaagttggttgaacaaaattaattgatgttatatcatatgtatctagcctccacaaaaataaattggagatgtatggttaaaatttccactatatttggtgataaataaatgtggcttttaatattaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-lbVmY/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0066K03.2" temp_strand="+" temp_description="C02SLm0066K03.2  submitted_to_sgn_as:C02Mbo0066K03 len=123077">
        <position start="32916" stop="103012"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33216" g_stop="33552" g_length="337"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="337" r_length="337" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="33553" i_stop="34428" i_length="876">
            <donor d_prob="0.760" d_score="1.00"/>
            <acceptor a_prob="0.958" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="34429" g_stop="34676" g_length="248"/>
          <reference_exon_boundary r_type="cDNA" r_start="338" r_stop="585" r_length="248" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="34677" i_stop="36280" i_length="1604">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.838" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="36281" g_stop="36481" g_length="201"/>
          <reference_exon_boundary r_type="cDNA" r_start="586" r_stop="786" r_length="201" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="36482" i_stop="37790" i_length="1309">
            <donor d_prob="0.908" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="37791" g_stop="37881" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="787" r_stop="877" r_length="91" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="37882" i_stop="38033" i_length="152">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.835" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="38034" g_stop="38304" g_length="271"/>
          <reference_exon_boundary r_type="cDNA" r_start="878" r_stop="1148" r_length="271" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="38305" i_stop="38384" i_length="80">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="38385" g_stop="38898" g_length="514"/>
          <reference_exon_boundary r_type="cDNA" r_start="1149" r_stop="1662" r_length="514" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="38899" i_stop="39494" i_length="596">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.608" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="39495" g_stop="39514" g_length="20"/>
          <reference_exon_boundary r_type="cDNA" r_start="1663" r_stop="1681" r_length="19" r_score="0.650"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="39515" i_stop="40604" i_length="1090">
            <donor d_prob="0.000" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="40605" g_stop="40642" g_length="38"/>
          <reference_exon_boundary r_type="cDNA" r_start="1682" r_stop="1718" r_length="37" r_score="0.711"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="40643" i_stop="40823" i_length="181">
            <donor d_prob="0.000" d_score="0.00"/>
            <acceptor a_prob="0.996" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="40824" g_stop="40851" g_length="28"/>
          <reference_exon_boundary r_type="cDNA" r_start="1719" r_stop="1747" r_length="29" r_score="0.571"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="40852" i_stop="41166" i_length="315">
            <donor d_prob="0.413" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.55"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="41167" g_stop="41288" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="1748" r_stop="1863" r_length="116" r_score="0.541"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="41289" i_stop="41660" i_length="372">
            <donor d_prob="0.000" d_score="0.54"/>
            <acceptor a_prob="0.822" a_score="0.48"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="41661" g_stop="41723" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="1864" r_stop="1923" r_length="60" r_score="0.524"/>
        </exon>
        <intron i_serial="11">
          <gDNA_intron_boundary i_start="41724" i_stop="41908" i_length="185">
            <donor d_prob="0.000" d_score="0.54"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="12">
          <gDNA_exon_boundary g_start="41909" g_stop="41930" g_length="22"/>
          <reference_exon_boundary r_type="cDNA" r_start="1924" r_stop="1945" r_length="22" r_score="0.727"/>
        </exon>
        <intron i_serial="12">
          <gDNA_intron_boundary i_start="41931" i_stop="42216" i_length="286">
            <donor d_prob="0.863" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.62"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="13">
          <gDNA_exon_boundary g_start="42217" g_stop="42261" g_length="45"/>
          <reference_exon_boundary r_type="cDNA" r_start="1946" r_stop="1988" r_length="43" r_score="0.622"/>
        </exon>
        <intron i_serial="13">
          <gDNA_intron_boundary i_start="42262" i_stop="42524" i_length="263">
            <donor d_prob="0.828" d_score="0.62"/>
            <acceptor a_prob="0.000" a_score="0.58"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="14">
          <gDNA_exon_boundary g_start="42525" g_stop="42656" g_length="132"/>
          <reference_exon_boundary r_type="cDNA" r_start="1989" r_stop="2110" r_length="122" r_score="0.561"/>
        </exon>
        <intron i_serial="14">
          <gDNA_intron_boundary i_start="42657" i_stop="42718" i_length="62">
            <donor d_prob="0.605" d_score="0.58"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="15">
          <gDNA_exon_boundary g_start="42719" g_stop="42735" g_length="17"/>
          <reference_exon_boundary r_type="cDNA" r_start="2111" r_stop="2127" r_length="17" r_score="0.647"/>
        </exon>
        <intron i_serial="15">
          <gDNA_intron_boundary i_start="42736" i_stop="42845" i_length="110">
            <donor d_prob="0.671" d_score="0.00"/>
            <acceptor a_prob="0.146" a_score="0.47"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="16">
          <gDNA_exon_boundary g_start="42846" g_stop="42943" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="2128" r_stop="2224" r_length="97" r_score="0.500"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0066K03.2" gen_strand="+" ref_id="SGN-U316652" ref_strand="+">
        <total_alignment_score>0.907</total_alignment_score>
        <cumulative_length_of_scored_exons>2247</cumulative_length_of_scored_exons>
        <coverage percentage="1.010" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0066K03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U316652" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33216" e_stop="33552"/>
          <exon e_start="34429" e_stop="34676"/>
          <exon e_start="36281" e_stop="36481"/>
          <exon e_start="37791" e_stop="37881"/>
          <exon e_start="38034" e_stop="38304"/>
          <exon e_start="38385" e_stop="38898"/>
          <exon e_start="39495" e_stop="39514"/>
          <exon e_start="40605" e_stop="40642"/>
          <exon e_start="40824" e_stop="40851"/>
          <exon e_start="41167" e_stop="41288"/>
          <exon e_start="41661" e_stop="41723"/>
          <exon e_start="41909" e_stop="41930"/>
          <exon e_start="42217" e_stop="42261"/>
          <exon e_start="42525" e_stop="42656"/>
          <exon e_start="42719" e_stop="42735"/>
          <exon e_start="42846" e_stop="42943"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGGGAAAATCAAGGGCTTATAAAATTTCCGCTTAGAGTAGCTATTTCTAATCAAAGAGACGATGGCTGAGGAAGCAGTAATTTCAGTAACAAGCCCTACGGCGGAGCAAAACCAGAACTCGGTGAACGCCACCATCGAATCTGGTGTTCAGGGAGGCACAGAATCAACTTGCAACAACAATAATAATAATGCGGAGAGTTCTGCGGTTACTTCTGATGTTAACCGTGAAAAATCTCTGGAGTACGCGGATGAGTTAGTGGTAAAAGGCTCCAAGGCATCTGAAGATGGAGATTATGGAGAAGCCGTAGAATGCTTTAGCCGTGCCCTGGAAATTCGGTTAGGGTTTACCAGTTTCATTTCCGCACCTTTCTTTTTAATATCAAGGAAATTTAACTGTTTGCTTGTTTTATTTTGTTTGAAACTGTTTGATTAGTTTCTTTCGAGTTAATTGTTGTTGATGGAAATGTAAAAAAAAAAAAAAAAGATCTTTAGGCGTCTTTGGTAATAAGGCGGTAAAGATATTACGGTTCCGGGTTTAATTTACTCCGGGTGGTTGAGTGGTTCATCTTTCAAGCGATTTTGGAATTTTTTTGTGGTTTAGTTTTGATGTGCAGAATATCTCGTTAACATGGCACTAATACATAGATACAGTACAGACTCTTTTGAGTGATTATCAGATAATTAATTTCTTCATACATTTACTTTACTTGCTTATGAAGCTGCACTGCGCAAAAACGGGAAAAAGTACTTTTTTTTTGTGTGCTGTTCAAATCCTTTCCATTTGGGAATGATTGAGTTGCAGACATGAAGTATAGGGTTGAGATTTACAAGCCCTCGTGGACTCTTGGCTTTTGCTGGTGCGATCTTCTATAGCTAAAGACAGCATGGACATCTGTTTCCAAGCTTTTTAGTGGACCGATTGAAATTGGAATTACTATCCATGTCTCTGCACATTATGCACCTTCATTTCTTTCTTCTGTTACAATTGCAATGCTGTTGGTTTACTTGTATTTAACTTTCATTGTTACATGAATGCGTGGGTAGAAAGGAAATATTTCAAGAGTTCTTCAAGTTGTTTCTAGGGCATTGTTGTTCTTTGCGTCATACAATATGCATAGTTTTAGAGTTTTTCTCTCCCTATATATTAACTTTATTATTATGCCATTTCTAGTAATTCTCGTTTCACATGGATTTCTTTTGAAAAAAATTCAGGGTCGCACATTTTGGTGAACTTGCTCCTGAATGTATCAATGCATATTATAAATATGGGTGTGCTTTGCTGTACAAAGCTCAGGATGAGGCTGATCCTTTGGTTTCTTTGCCAAAAAAGGACAGCGGGTCTCAACAAGATTCTAATAGAGACGGCTCTGTTAAAAGTGTTGTTAGTTGTGAGTCTTCTATTTCAAGCACTGCTGAACCTGGTGGAAGTTCGAATGGAAAGGAAAAAGTAGAAGATGATGGTTAGATTCCTTTGCATTATATTCTCATTTGATTTTCAACAACATTACTCGTGCTTTCTATTAGTGACATTATCTCAAAACATAATAACTGAATTGAAGAGTTTGCTAAGTAGTTACCAAAATTAGCATCGACGCAAAATGTGTCATAAAAATATATTTAGCAACATAGTAATGTGAAGCAAGGACTTTATCACCTCATGGTGAATCGATTAGCTTCTTCAAAGACCATCACTTTAGAAGTGAGGAACAGAGTAATCACAAAAAAATGGCTTGGCCTAGTGGGATTACTGATCCAGATAGAAGGTAAAGAAAACTTCATCACTTCATGGGTCTTAATGAGCTTCTTCAAAGACCATCACTTTAGAAGTGAGGAATATAGTGTCACAAAAAATGTTTATCACTTCTTGGGTGAACATTGAGCTTCTCCGAAGTCCATCACTTTAAAAGCCAGGAACAAAGTGATTAAAAAAAGTGAATTTCTCAGAGGTATAGCTATTCTAGTAGCAACCCTTGTGAAATTAGTCGAGGTGTGCACAATCTGGCCTGTACATCATGGTTATAGAACAAAAAAGAGTGAGCAATTGATCCAGCAAAAACAATTCATTTTGAACTTCACTTTAAAGGTTATGTAGGAGAGAGAGAGAGAGAGAGAGAGTTTCCTGCCATTTTAGTGCGATTACTCCTTCCCATCAGCATTTGACATTCTCTTTATCCGTTGTCTACTTCATTTATTGAGTTTGTAAAATCTCACCTTTTACTGCTTCCAGTTCCCTGTTTCTTTCGATTCTTCATTTTTTCAAACAATGACTTTTCTTTCTCTATCTGGTATATGAGTTCTATTCTTCTACAACTTCTCATTTTGAGCTTCTCTCTTTTTCTCTCTTAATACATTTTAGAGTAACTAATTATGGAATTGCATGTTGCAAATTAATTCTTTTTTTCCTCAAAATTATATAGTTGTGGAAGTTAGAAATCAATTATGCATCCAAAATCATGTGTCTGTGACCTTGTTGACATAATATTTTAAAGATGTTCAATTTTAGTTTGTGTCAATTGTACACTGGACATTGAAACTAGTGGCTTTAATGGCACTGCAATGTTATAAGAACTAAATTCATATATCCTTGTAAAGAAGTTCTAGATTCATATATGTTTGGTAATATTTATATTTTCTGTAAATGTGCACTTCATTCCTAAGAGACAGGCTCTTAGCTTCTCATTTTTGGTTTGAATGACCATGGTTCTTTTTCTTACTGCACATCTTTCTATAAAGACACAGTCTGTTACAATTTTATATTTTTGGGGGGTGGGGGATGCGGAGAGGAAATTTAGTGTACCCAGTTGATTCACATAAATATATGAGTTGCTATAGAGTCATGTGCAATCGCCTACAATATATGTCAGTTTTAGTTAAATACTGATTACTGCTCCGTCCTTTATAAAGAAGTTTCTGGAAAGATATATTATAGAAATGTAAAGATGTGCTGCTGCTGTTTTCCTGCTAATAGAAATCAGCTACGTGCAACTATTTTGTCACTAATTGAGATCAGTTATCCTCTTTAGATATGATAGTTCTTGTTGTGGCTTACACTGTTATGAGACAGCTGCAGAGGAAAACGAAGATGAAGGAGATGAAGAAGAAAGTGATGACGAGGACTTGGCTGAAGGTGATGAGGATGAAACTGACCTGGATTTAGCCTGGAAACTGTTAGATGTTGCAAGGGCAATTGCTGAAAAGCACGCTGGTGACACAATGGAAAAAGTGGATGTATTATCAGCTTTGGCTGAGGTAGCCTTGGAAAGAGGTTTGTCTCCATTAAACAATACTTCCATTACCTCATTAGAATAGTGACGTCAGACACTTATTTTTTGTATGGGAAGTTGAAATGTCCATTGGTCTATCAACCACTTATTGTCTTGTTAACTAAAATATGTACTGTTAACCAGACTAATACGTAAATTGTCATCTCAATGAATAACTCAGTTGATTATATTCCAGCATTTTGGTTGTTTTGAATTGCAATCCCAAGCTGCAAATAGTTTCTCTAACTCAAAACTGTTCGAAACAATGGAAATAACTGTAGGAACTGGATAAAAGGATGACTGTTCAAAGTATTAAAAGGTGAGGTCTAACTAAAAAAATGCTAGGTAATTTCTGTCCACCCGTCTAAGTTTTGGTGACAGTTATCTAATATACTTGTGGTGGTGGGATGTAGCAAGTATCGGGTGAATTACTTGAGGCGCAAACATGTTGGCCCGGGACCTCTATTATCAAGAGAGTGAGATAGATAGAGACTGTTTGTGTTCTAAAAAATTTCTTATCTACATGTGCAAAACGAGGGGGTGTAATCAGACATATGAAACGGAGGTGAACTCTAGTTTTATCATCAGTGAGTTATAGATGTTGTGGAACATGCTGTGTTGAGAGGTGGACTGAGATCGAGGGAGTGACTGGTAGATTGAGGGGTGTAATCTGAGTACAGACATGAAATGGAGGTGAACTCTAGTTTTATCATCAGTGAGTTTTAGATGTTGTGGAACATGCTGTGTTGAGAGGTGGACTGAGATCGAGGAAGTGACTGATAGATTGAGAGGCATTGGAGGCAAATATTGGGGTGAGCAAGGATGGAGAAGTGATGTTAGTGACTTGACACACTGGTGGAACTTCAAGCCGCGACCGAGAGATAAGAGGGACACGATCTATGTTGCTTGTATCCTCCAAAATGCCACTGTACCCATGTTGGATCCTCTAATGGGAGGGCATATGGGTGTGATGACAATTTTAGAGGATCTGAGCAATATTACATGACTATGAGTTACGAAGCCCCTGTTCCTCCTATTAAAATCTAGCTCAACAATTTGCTAGCATTTTTAGTTGGAATCTTGTATTCACATTCTAGATTGTTATGCGCTGCTTTTTCAATGAATTCTTTTTGAAAATATTAGGTGACTGGAAATGGATTTAATAATTGAAATAAAAATGACCTAAACAAACTGATCAAACCAAATGCAAATGATTTGGACCTTTAGTTGCCTTTTTAGTAGAAACAAAATGTTTATTTCTCTTCTTCACATGCTATTAGATTTGTAAATGTTGTCCTTTTCCTTTTGCAGAGGATATTGAAACTTCCCTTAGTGATTACCTGAAGGCATTATCCATTTTGGAACGCTTGGTTGAACCTGACAGTCGCCATATTGCTGCGCTGTATCCTTAGTAACATGTAACTTATCTTTAAATTAAGGGGATTGTTTTCTGACCTACATCTAATTAGTTAAGTCTTTATAATGATTTCTTTAAGTGCCAACATTTAAGTGTTGCTTCCTCTTCCTTGCCTTGTGATCTTAACTGTATTACAGCAACTTTAGGATATGCTTATGCCTGGAAATTGGTTCTAAGCATCAGGAAGCCATACCATACTGCCAAAAAGCTATTTTAACTTGCAAGTCGCGGCTGCAGAGACTCACTGAGGAAATAAAGCTTTTGTCAGAATCAACAGAAAGATTAGCTACTACCGATGTAGATCAGATTGCGAGACAGTCTTCCAGTATATCACAGTCTGACTCTGTATCTGCTAAAGAAGCTGAAGTTGAAACGCTCACTGAACTTTCTGCAGAATTGGAGAAGAAGGCAAGTATCAATCACCAGATGAATCTTTAGTAATGTCTTAGTTCTTTCTTATTTTATAATTGTGACTCTTCCACTTGCAGCTTGAAGATTTGCAGCAGTGTATGTCAAATCCATCATCTATCCTCTCCGATATTTTGGGAATGGTGTCTGCGAAAGCAAGAAGTCTAGAGAATGCTGATGCTTCTGTAGCTGTGAACTCCTCACAGATGGGTGTTGGTACCAGTGGTAGCGGAAGTTTTGACTCTCCAACTGTTTCCACTGCCCACACAAATGGTGCAGCTGGAATAACCCATCTTGGAGTAGTTGGAAGAGGAGTCAAGAGGGTGCATCTAAACACAACCACAGAATCTAGTCCAGCGAAAAAACCTGCATCTGAGCAGCCGTCAGATAATGGAGATGGCACTGCCTCTTAAAGCATGTATTGTTGGTGCTTCAATTAAGTTACGGTTAACATTTCAATTTAGCTTATTGATAACATTGGTGGATTACCTTAGTTTGTTGCATTCTCTGTTGGTTAGCTGGGAAGTGTGTTGCCACAGATCGCATCAGTTTATTTCCTTAAATTAATTACCTTGTATGCATGTTGACTATTCAGTATGTGTTGCTTTGCTTCTTCTGCAGTATGTTTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAATCTACGTAAAGACTCAGAAGTTGATTACTTCTTTGAACGAAATGATAGCTGTGCTGGCAGACCAGTAATTGAACAAGTAACCACTGTCTAATTGGTTCTGAAAATCTGCTAATTAACCATCATGCAAAGTGGTAAGTATTTTATACATTTGTGTATTTATTTATAACTCTACCTTTTTGAAATTAACAGTCGTTCACCTATGCGTACTTCTTCCAGTAAATTTTTGGTTATCTGTGAGCAAGAATTTGTTCTTCTTTCACATCATTTAACAGACATTATGCTTCAAAATAACATGACCTTTTTTTTAGGCTTAGTTTGCTATTCATCTTTGCTTTGAACAGAAGTTTATTTCAGTCGAAGTGACATTAGGTGATCTTTTCGTTGCTTGGTGGGTCGAGAGTAGTGGGTATTTCATGGATTAATTGACGAGTGCGTCTAGACACCACCATTATGCATAATATGTTGTGATGTTATTCGAGAATATATTTGGGTAGGGAAAATAAAAGACAATTCAGTGGTAGAATATTGTAAGACAACATTCCTCTGGCAGGTAAGTCGTACGAATGTTTCCGACAGTAAGCGCACTTTCATGTGAAGTAAACCTGCTCTGTGTCGTTTATATACTTCTAAAGATGCTCTTAAGCAATATTGATTTAGTGCTGAGAACCATATAGTAATAGCATGTCTTGTCTGATGATAGTATGGAAGCAGACAAACACCAAATGCCAATGTGGTACCCTAGGGCTAACAAAAGTCCCTAGTAACTTTGTCTAGGAAAAACATTTTAGGTGAATACAGAAAGAACCAATACGATACCATCAAAGGAACTTTTAACGATTGGTCGTTACCACCAAAGTTGATGGAACTTGTTTTTATAGTGGATTGGTCCAGAGTTGTGAGACAGAGAAAATGTGTTATAGAGTTGACTGCAAAAAATGCGGCAAGTACTCCTGGGGTGGGTGTGGTAAACATTTGAACACCCTCTATGGTAGCATCCAACAAGGCAATCATTGTAATTGTCGTCCTTGGCCTGGAGTTGTCATGCCCTCTTCTCAGACCATCACCCAAAACAAACAAACTGTTACCCAAAACGAATGTGATCCCACCACCACCACAGCAGGTATATACACAAATCTAGAATGAATATAACTTAACGTCACGATTCAACTTGAATGATTTAATGTAAATATTAAGTATAAAAAAGTTTGATTTTTTCTTTTAAAATTACGCTTCAATAGGAAAGTAGTACACTGCCACTTTTTATTTTGTTTATTCAAGAGTTTGGTAGACCTTTAATTTGTGATGGTCTCATTATATGTCAAGTGCCAACTAAAAAAAAGGAAGAGGAAATTCTCTCCTAAAGTTTTTCTTTTTAATATATATATTTTTAAATAACTATCCGAAGACACCGGAAATTCTAGTGTTTACAGCTTTTGACAATTTTGTTCATACTTTTTCTATTGAAAACGATTCGAAATTTTAAGCTATAATTTATTTCTTCGTTTCTCTAGATACTTCATTTTCAAAAAAGTGATTTATTTGTTGGGGTGGAGACAAGCAATGATGGTGCTTATAGATTTAATCTTATCAAACAGTACTTTTTTTAATCCTTAGATTCGAAAAACCATAATATTAACTAGATTCGCACTTCATTTAAGTCCGACTCACATCATTATCATCATATTAAACAAAAAATAAGTTAAAGCTGATTTATAAGGATCAGTGTATATTGACAATTATTCTACTACGTAGATTTGAATCGATAATGTGAGAAAGTTTATCTAAAATCGTTGATTGATTTCAAAATAATTGTTGTTTTTCAGGTACTC-AACGAGGCGATGATGCCGTTGGGTAATAGCTAAACTGCTACTGGAGACCAATAAATAAAGTGTATTATTAATCAATTATATAATATATAATAACAGTCATTTGTAATAAATTAATACAAATAATGCGAATTTTAAGGTCAATACACATTGACCGAACACTCTAATTTGCTTACGAAGTTGTAAAATAAATTTTGTTTTCCAGAATTGAGTCTTCTTTTAACCTTGTGCAGGGTGTTTTGTAAATTTTTATTTATTCAATAAATATAAGTAATTAATCGTGGGTTTTGTGCCGCTTTTGGGTTTTTTCTTTATTATTCTCAAGAAGCTAGTAATGTTTTGGCCTTTCTGCCTCCATTTCTCAAATTCACTTTTGAATTTGAATAT-TATAGGTTCAA-AATTAGAAATTTTAGTATTTGATTTATTACATTGGTAATCTATTTATCTAATGTATATAAATTAATATATATGGAAGATTTGAGTTTTTGCCTTTTAGATTTATACATATAGAGGTTGAGCCTATCATTATTTATTTTTCACCTAGGCCACATGGGCTATGATATGAATATTTGGACATCGTGGGACCAGTTCGATCAATCGAGTGTCAATTGAGCATCTTCCTTAAAGGCAAATGTCAACTTATAGTCCTATTATTAGTCACTTAATATTAAAGAATGCCCACCTAATATGGCTATAATCATGGCATTTTATTGTCATTCACTTTGGAACATGGATAGTTTTAGGGGAGGACATTCCATGGATGCACTTGTATAAAATAATGTGTCTTTTTTATAGTAGTAGCATTTTAATATTATGATTAGGAATGTTAAATAGGTAAGTGCAGAAATGTATTAAGGTGAGATGAGTTAAACAATGAATCAGATACTAGCTTAATTAGTTTTTAGATGAGTGAATTTGATGTACAAAATAGATCGAGTTAATAAACATCAATGAGTTATTAACTATTCCAAATTTAAACAGATTAAATCAATTATATTTTCACGTTGAGTCTTTGTAAGAGAATGTTTAGTTGTTTAGCAAACGTCTGCAATTTGCACCATTTAAAGTCATCACCATCTGCAGTAAGATCAAATAATT-AAAAGAGTACCATAATATAAAAATCAGATCTCCTGTCTTCGTTATACTAATATTTAAATAGAATATATTATTGTCGTGTTATTTATTTTGAATTTGAAATGTTAGATAGAAGAATTAATATTGAGCAACCTCTCTTTACGTGGACCTCATAAAGTCGACACCATTTATTGCCCTACTAATAAATATAGGTATGTTTTAATTAATGGCAGGCAGTTGCCCATTTTTAAAATTTTCACGTCTCAGTTTTCCAACCAAACTTTGGTTTCCACATTGAAGAAGACTATGCAGTAAGAAAAT-CAAAATTAATCGATGTTTTAATACAAATATTGAATATAAGGTAAGAAATCAAAAGTGAAATTGAATTATATCACGGTATACATGTGAGCTACCAAACTCTAGAGTGTCAAATTGCTCTCAAGCTGTTATAAATTTGTTGTGCTATTTATTTTTTAATTTGATTTGAGCAGTAAATGTGGGCTTTATATTGAGTAAAATTCAAATTGTCATGGATCCTTAAAAGGTACGATAACTGGACACAGCATATATGGGCCACCTTTAGCTGGAGGCCCCTTTTGGGACCATCCATATTTAAGTCATTATAACTCCATAATCTTGATTTGAAATCGGTTGTTGCATTAGTCTTCTTTTTAACTTTTTGACTCCATTGACTTA-TTACTATCAAACGTGTGTGGCGAAGTGGATGAGATTGATCTTTCTTCAAGTAGAGATCTCGTATATATGTTTGTTTCAATTAATTTGAAAATGAGATACGATTCATGTATAATCAAACATACCCGTCCAATGAAACAAAGTAAATTTAAATGTTAATTATGACAACAACGTGAATACTCCTTTAATCAAGTTGCGTATGATTATAATCTCTAATTAGGCCCACCCAAATACATTATAGTAATATAATAGGGTAGTGTTG-ATGCAGAAAAGCAATAACGATAGTTGGCAAGCAAAGTGTGTTTTTGTTGCTTATAAACAGAGAAAAAAGGGAACAATTTAATGATGAC</genome_strand>
        <mrna_strand>GAGGGAAAATCAAGGGCTTATAAAATTTCCGCTTAGAGTAGCTATTTCTAATCAAAGAGACGATGGCTGAGGAAGCAGTAATTTCAGTAACAAGCCCTACGGCGGAGCAAAACCAGAACTCGGTGAACGCCACCATCGAATCTGGTGTTCAGGGAGGCACAGAATCAACTTGCAACAACAATAATAATAATGCGGAGAGTTCTGCGGTTACTTCTGATGTTAACCGTGAAAAATCTCTGGAGTACGCGGATGAGTTAGTGGTAAAAGGCTCCAAGGCATCTGAAGATGGAGATTATGGAGAAGCCGTAGAATGCTTTAGCCGTGCCCTGGAAATTCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTCGCACATTTTGGTGAACTTGCTCCTGAATGTATCAATGCATATTATAAATATGGGTGTGCTTTGCTGTACAAAGCTCAGGATGAGGCTGATCCTTTGGTTTCTTTGCCAAAAAAGGACAGCGGGTCTCAACAAGATTCTAATAGAGACGGCTCTGTTAAAAGTGTTGTTAGTTGTGAGTCTTCTATTTCAAGCACTGCTGAACCTGGTGGAAGTTCGAATGGAAAGGAAAAAGTAGAAGATGATG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCAGAGGAAAACGAAGATGAAGGAGATGAAGAAGAAAGTGATGACGAGGACTTGGCTGAAGGTGATGAGGATGAAACTGACCTGGATTTAGCCTGGAAACTGTTAGATGTTGCAAGGGCAATTGCTGAAAAGCACGCTGGTGACACAATGGAAAAAGTGGATGTATTATCAGCTTTGGCTGAGGTAGCCTTGGAAAGAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATATTGAAACTTCCCTTAGTGATTACCTGAAGGCATTATCCATTTTGGAACGCTTGGTTGAACCTGACAGTCGCCATATTGCTGCGCT........................................................................................................................................................CAACTTTAGGATATGCTTATGCCTGGAAATTGGTTCTAAGCATCAGGAAGCCATACCATACTGCCAAAAAGCTATTTTAACTTGCAAGTCGCGGCTGCAGAGACTCACTGAGGAAATAAAGCTTTTGTCAGAATCAACAGAAAGATTAGCTACTACCGATGTAGATCAGATTGCGAGACAGTCTTCCAGTATATCACAGTCTGACTCTGTATCTGCTAAAGAAGCTGAAGTTGAAACGCTCACTGAACTTTCTGCAGAATTGGAGAAGAAG................................................................................CTTGAAGATTTGCAGCAGTGTATGTCAAATCCATCATCTATCCTCTCCGATATTTTGGGAATGGTGTCTGCGAAAGCAAGAAGTCTAGAGAATGCTGATGCTTCTGTAGCTGTGAACTCCTCACAGATGGGTGTTGGTACCAGTGGTAGCGGAAGTTTTGACTCTCCAACTGTTTCCACTGCCCACACAAATGGTGCAGCTGGAATAACCCATCTTGGAGTAGTTGGAAGAGGAGTCAAGAGGGTGCATCTAAACACAACCACAGAATCTAGTCCAGCGAAAAAACCTGCATCTGAGCAGCCGTCAGATAATGGAGATGGCACTGCCTCTTAAAGCATGTATTGTTGGTGCTTCAATTAAGTTACGGTTAACATTTCAATTTAGCTTATTGATAACATTGGTGGATTACCTTAGTTTGTTGCATTCTCTGTTGGTTAGCTGGGAAGTGTGTTGCCACAGATCGCATCAGTTTATTTCCTTAAATTAATTACCTTGTATGCATGTTGACTATTCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAT-A..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAACTTTAGATTCTTAAAAACA-AAGCTGAATTATAT.....................................................................................................................................................................................GGAGGCAAATAAGTCTATGGTGAAGTTGG...........................................................................................................................................................................................................................................................................................................................TTG-CTTTCTTGAT--AATTCTTGTA-TCA-TCATG-CTTTCAATCTCTCACTGCTCAAGATTTGGAAATCGAAGTTAGCGATGGCTTA-AAT-GTATTGCAAGTACATGATGTGTCTCAATCT....................................................................................................................................................................................................................................................................................................................................................................................TTTTGTCCAGGTGTG-ACAAAGGAAAGTTG-GCCAGA-ACTTCTTGGAACACCAGCTAAGTTT.........................................................................................................................................................................................GCAA-AGCAAATAATTCAAAAGG..............................................................................................................................................................................................................................................................................................AAAATCCAAAATTAACAAATG-TTGAA-AC-TCTACTGAATGGTTC.......................................................................................................................................................................................................................................................................AGCT-TTTACAGAAGATTTGAGAT--GCAATAGAGTTCGTCTT-TTTGTAAATTTAT-TGGACATTGTTGTACAAACTCCCAAA-GT-TG-GTTGAACAAAATTA-ATTGATGTTATATC-A-TATGTATCTA..............................................................GCCTCCACAAAAATAAA..............................................................................................................-TTGGAGATGTATGGTTAAAA-TTTCCACTATATTTGGTGATAAATAAATGTGGCTTTTAATATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-OMR5jX/lycopersicum_combined_unigene_seqs" ref_id="SGN-U326218" ref_strand="+" ref_description="SGN-U326218">
      <seq>taccaaccttcctacagagattagctcaagaacttcaacaaccacaaggattctcttcggcttattgagaacagcaaacatactaaatgcttcggaagctgctcgagctgcactagagcggaaaatcggatctcaactggagcacgccacattagacgatcttctcattccaagctactcttatctgaatgaaacgttatacgatgtcgcttgtgtggagagaatattaggatattttttaaccggattggaagagaggtctaccgctagaattcaaggcgaagaagaaaacatcagtgtcagatccacggcgctaatgttagtcggcaagttaattgacggttacttatcagaaatagcctctgataataatttactaccggaaaaattctgtgaattagctgttgcattgccggaccaagcaagactctttgatgatggcctttacagagctgtcgatgtgtatctcaaggcgcatccatggatatcggaagcggagagggagcaaatatgcggagttatggattgccaaaagttaacactagaggcgtgtacacacgcagctcagaatgaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-lbVmY/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0066K03.2" temp_strand="+" temp_description="C02SLm0066K03.2  submitted_to_sgn_as:C02Mbo0066K03 len=123077">
        <position start="44069" stop="45331"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="44369" g_stop="44840" g_length="472"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="472" r_length="472" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="44841" i_stop="44928" i_length="88">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="44929" g_stop="45031" g_length="103"/>
          <reference_exon_boundary r_type="cDNA" r_start="473" r_stop="575" r_length="103" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0066K03.2" gen_strand="+" ref_id="SGN-U326218" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>575</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0066K03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U326218" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="44369" e_stop="44840"/>
          <exon e_start="44929" e_stop="45031"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TACCAACCTTCCTACAGAGATTAGCTCAAGAACTTCAACAACCACAAGGATTCTCTTCGGCTTATTGAGAACAGCAAACATACTAAATGCTTCGGAAGCTGCTCGAGCTGCACTAGAGCGGAAAATCGGATCTCAACTGGAGCACGCCACATTAGACGATCTTCTCATTCCAAGCTACTCTTATCTGAATGAAACGTTATACGATGTCGCTTGTGTGGAGAGAATATTAGGATATTTTTTAACCGGATTGGAAGAGAGGTCTACCGCTAGAATTCAAGGCGAAGAAGAAAACATCAGTGTCAGATCCACGGCGCTAATGTTAGTCGGCAAGTTAATTGACGGTTACTTATCAGAAATAGCCTCTGATAATAATTTACTACCGGAAAAATTCTGTGAATTAGCTGTTGCATTGCCGGACCAAGCAAGACTCTTTGATGATGGCCTTTACAGAGCTGTCGATGTGTATCTCAAGGTAATGACATTTTCTTAATTATAGAAGTTATTCACTTTTTTAGTTCTATCATTTGTGTTTAATATTGTTAACTTAATTCCTTATGCAGGCGCATCCATGGATATCGGAAGCGGAGAGGGAGCAAATATGCGGAGTTATGGATTGCCAAAAGTTAACACTAGAGGCGTGTACACACGCAGCTCAGAATGAAC</genome_strand>
        <mrna_strand>TACCAACCTTCCTACAGAGATTAGCTCAAGAACTTCAACAACCACAAGGATTCTCTTCGGCTTATTGAGAACAGCAAACATACTAAATGCTTCGGAAGCTGCTCGAGCTGCACTAGAGCGGAAAATCGGATCTCAACTGGAGCACGCCACATTAGACGATCTTCTCATTCCAAGCTACTCTTATCTGAATGAAACGTTATACGATGTCGCTTGTGTGGAGAGAATATTAGGATATTTTTTAACCGGATTGGAAGAGAGGTCTACCGCTAGAATTCAAGGCGAAGAAGAAAACATCAGTGTCAGATCCACGGCGCTAATGTTAGTCGGCAAGTTAATTGACGGTTACTTATCAGAAATAGCCTCTGATAATAATTTACTACCGGAAAAATTCTGTGAATTAGCTGTTGCATTGCCGGACCAAGCAAGACTCTTTGATGATGGCCTTTACAGAGCTGTCGATGTGTATCTCAAG........................................................................................GCGCATCCATGGATATCGGAAGCGGAGAGGGAGCAAATATGCGGAGTTATGGATTGCCAAAAGTTAACACTAGAGGCGTGTACACACGCAGCTCAGAATGAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-OMR5jX/lycopersicum_combined_unigene_seqs" ref_id="SGN-U315690" ref_strand="+" ref_description="SGN-U315690">
      <seq>tctttcaatatttttgtatgaacttatttcagtatattttcctgaacaaagaaaatggaaactaatcgttgggagggttatttcctgttaaacatgaagctgctgtcacatatgattttggaaacatcgaacgtaatctcttggtccctgccataaataatttggagaaagaggactgcaaagtgtgatctcaattttatgctctttctagtgagaagatgtccagaatagaggaacttgttacatgggatgtttatggttcaggtccttctgaattctattatgatggagatgatttgacacatgcaatctcatggtgaagagattcttaagaattatttgataccacgagctatgctctcctctagggtggatggtgacttacataaatggattgatgctggaagtcgaggtaaaacagatgagcttattaggaagaagaagagtacaaaaagtcattcagctcctccattttaccaaggcaagaagaagttctttgccacggctgagtcttcaagaaaggcagcaggaaataagaatattatgactgttcatgatgtgccactcatgccagctgtaaggagactgcatcattctgtagaagctatctgcttggagcttcacgacagtcatcccatcaatgtgatcaatcttccaccccaagttgcggtga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-lbVmY/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0066K03.2" temp_strand="-" temp_description="C02SLm0066K03.2  submitted_to_sgn_as:C02Mbo0066K03 len=123077">
        <position start="53283" stop="50046"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52983" g_stop="52911" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="73" r_length="73" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="52910" i_stop="51036" i_length="1875">
            <donor d_prob="0.577" d_score="1.00"/>
            <acceptor a_prob="0.941" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="51035" g_stop="50535" g_length="501"/>
          <reference_exon_boundary r_type="cDNA" r_start="74" r_stop="574" r_length="501" r_score="0.998"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="50534" i_stop="50445" i_length="90">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="50444" g_stop="50346" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="575" r_stop="673" r_length="99" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0066K03.2" gen_strand="-" ref_id="SGN-U315690" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>673</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0066K03.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U315690" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="52983" e_stop="52911"/>
          <exon e_start="51035" e_stop="50535"/>
          <exon e_start="50444" e_stop="50346"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTTTCAATATTTTTGTATGAACTTATTTCAGTATATTTTCCTGAACAAAGAAAATGGAAACTAATCGTTGGGGTTAGCATTCACTTTATTGAATTCTTGTTTCTCACAGTGCATTTACTATATCGGTGCTTCAGTGCTTGTTTTCAGTGGTGTTCTTGTTTTCCTTGTAATGCAGATATCAATTCAAGATTTATTTCCAAAAGACCAACACATAAATTACTTAATAACATAGAGATGAGTTTTGGTAGTGCTTCTGACATTGAGTAGCGAAATAGATCTCAGATTTTTTTTTGAGACAGTAACAACAAAATAGATCTCAGATTTATCCACTGTGTTTTTTGAACCTGAACTGCTCAAGATCTTTACATGATTTGACTTTGGAGCCTTCAATGACCTCTGTGGAACTTAAGGTGAGAGTTTTTGTTGGCAATTATTATTTAAGTGTTGTGGGATTGGGAAACGAATGTGAGTCTTTGGTTTTATTTTTGTAGAATTGAGTTTCTTAGGTTTAGTTTTGTGAGAATTGGTTTGGGTTGCTTTATGTAAAATTTATTTCAAAACACCTAATCATTTTTTGGAACTTCAATATGTGTGAAATTAATATGTTAAAATTTGCCGAACATCATTATTTATTACCAATCGTATAGGATTTCAAAGTATTAAGATGGAACCCCTAACAGTTAGAAGGCCCTTGCGGCACATCTATTCCCAGAGAACACAATAATCTCCCCTTTGTTATGGGAGAATAATGCAAAACCACGTTTCTAGCTTCCTGTGGTTGCAAAAGCAAACAGACCAATTTTAAGACGGACATATGTCATACATACTTGTTTTACTGATTGGAGTATTGAATTTTGTATAACAATGTGTTTGCTGTTCTCCAAGACTGACAATTCTTCTGGTTTGAACTTAGTCTCCTGGTTCTCTTACCCAATCATTTCTGCTTCCCTTCGAATGAATTTTGCGATTTTCCTCAAAATTTACTTGATTTTCATTTATCTAGATATTTGCTACATCAATCTTCTTGGAGCCTTGATATCTTTAGGAGATGATGACATCCAGCTTTTATTGATTTTTGAGATCAGGGTGGAGAGGTGGCTCATATTGTTAGGAGTTTCACACTTGTAGGTCAATCCTGGTCCATCTAATCCACAAAAAATTCCGTTATTCAGAAAAATTGAACCCTATCAAAAAATTTAGGTTGATTTTCATTCTTCAGTTGTGGAGGTTGGAAACACAACTTTGACCTATTAAATATGCTAATACTGTTGATCTTTGGCATCCTTCTAGAGATTCAAGAGCTTTCGAGTTTTACTTTTTTATGTGTTCTTTGTTTTCAAAAGGTATCAACTTTTACCTCCTTACTGAGTTATTATCCTTTCTCTTTTTTGAAGTAATAAATGAGAGAACAATATAAATGATTTGGATCTTAGAGAAAGTGACTTCACTTGAACATATAACACTACTCTAATGCTCTGATGTGCAGCATAACTTCCTTTTTTGGCACCATTGATACGGACTGTGTTAATCTGATAAAGCTATTTTGATGTGTTTTAAAAGAATATCTTGTGGTGACTAATTGGTTCTTAATGGTACTTTTAGGATTTGCACCCTTTCCTTTTATTGTTGAGTATACTGTCGCGAATCTCTGGACTGGAAGTCACTCTGTCGGTGAAAGCATTTGTACTCGACATTTTTATGCAACATCACTTAGGATTCATTGTACTTGATATGATTTGTACATGTAGCTTTTGTCCACTCCACATTCCCTTCCCTGTATGCTGTAGCAGTCGTCCACTTGCCTCACTTAAAGATGGGGGGGGGGGGGGGATTCTGGAGGGTGGTTAGTGGAAGAGTATGCTATCATGTAGTTTATCACTATCTTCTCTTTAGCTACTTTTGAAAAAATCTAGATAGAATAAAGATTCCTCTAATGTTTACCTACAGAGGGTTATTTCCTGTTAAACATGAGGCTGCTGTCACATATGATTTTGGAAACATCGAACGTAATCTCTTGGTCCCTGCCATAAATAATTTGGAGAAAGAGGACTGCAAAGTGTGATCTCAATTTTATGCTCTTTCTAGTGAGAAGATGTCCAGAATAGAGGAACTTGTTACATGGGATGTTTATGGTTCAGGTCCTTCTGAATTCTATTATGATGGAGATGATTTGACACATGCAATCTCATGGTGAAGAGATTCTTAAGAATTATTTGATACCACGAGCTATGCTCTCCTCTAGGGTGGATGGTGACTTACATAAATGGATTGATGCTGGAAGTCGAGGTAAAACAGATGAGCTTATTAGGAAGAAGAAGAGTACAAAAAGTCATTCAGCTCCTCCATTTTACCAAGGCAAGAAGAAGTTCTTTGCCACGGCTGAGTCTTCAAGAAAGGCAGCAGGAAATAAGAATATTATGACTGTTCATGATGTGCCACTCATGCCAGGTAATTGGTCCTTGAGTGCTTGTTTGTGTTAATAATGAACGATGATAGAAAATGTGTACCTAATTAATGTTTTTTCTATCGCGCGTAAAGCTGTAAGGAGACTGCATCATTCTGTAGAAGCTATCTGCTTGGAGCTTCACGACAGTCATCCCATCAATGTGATCAATCTTCCACCCCAAGTTGCGGTGA</genome_strand>
        <mrna_strand>TCTTTCAATATTTTTGTATGAACTTATTTCAGTATATTTTCCTGAACAAAGAAAATGGAAACTAATCGTTGGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGGTTATTTCCTGTTAAACATGAAGCTGCTGTCACATATGATTTTGGAAACATCGAACGTAATCTCTTGGTCCCTGCCATAAATAATTTGGAGAAAGAGGACTGCAAAGTGTGATCTCAATTTTATGCTCTTTCTAGTGAGAAGATGTCCAGAATAGAGGAACTTGTTACATGGGATGTTTATGGTTCAGGTCCTTCTGAATTCTATTATGATGGAGATGATTTGACACATGCAATCTCATGGTGAAGAGATTCTTAAGAATTATTTGATACCACGAGCTATGCTCTCCTCTAGGGTGGATGGTGACTTACATAAATGGATTGATGCTGGAAGTCGAGGTAAAACAGATGAGCTTATTAGGAAGAAGAAGAGTACAAAAAGTCATTCAGCTCCTCCATTTTACCAAGGCAAGAAGAAGTTCTTTGCCACGGCTGAGTCTTCAAGAAAGGCAGCAGGAAATAAGAATATTATGACTGTTCATGATGTGCCACTCATGCCAG..........................................................................................CTGTAAGGAGACTGCATCATTCTGTAGAAGCTATCTGCTTGGAGCTTCACGACAGTCATCCCATCAATGTGATCAATCTTCCACCCCAAGTTGCGGTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-OMR5jX/lycopersicum_combined_unigene_seqs" ref_id="SGN-U315688" ref_strand="+" ref_description="SGN-U315688">
      <seq>tttcctgtcttattctcttcagattttgttcatttgcacgcaatgaagatgaccttctttgcacacgtgcttgtccttctctgtttctgctgttgtccagtgggttcgggtgtcatctgagttcccttaacaaattgaatgcaagtgatggttcatataaactctcaggatatatctctggtatgttcacacagtgaaggtctttcaatatttttgtatgaacttatttcagtatattttcctgaacaaagaaaatggaaactaatcgttgggatatcaattcaagatttatttccaaaagaccaacacataaattacttaataacatagagatgagttttggtagtgcttctgacattgagtagcgaaatagatctcagatttttttttgagacagtaacaacaaaatagatctcagatttatccactgtgttttttgaacctgaactgctcaagatctttacatgatttgactttggagccttcaatgacctctgtggaacttaagagggttatttcctgttaaacatgaggctgctgtcacatatgattttggaaacatcgaacgtaatctcttggtccctgccataaataatttggagaaagaggactgcaaagtgtgatctcaattttatgctctttctagtgagaagatgtccagaatagaggaacttgttacatgggatgtttatggttcaggtccttctgaattctattatgatggagatgatttgacacatgcaatctcatggtgaagagattcttaagaattatttgataccacgagctatgctctccntctaggtggatgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-lbVmY/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0066K03.2" temp_strand="-" temp_description="C02SLm0066K03.2  submitted_to_sgn_as:C02Mbo0066K03 len=123077">
        <position start="53572" stop="50432"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="53272" g_stop="53074" g_length="199"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="199" r_length="199" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="53073" i_stop="52985" i_length="89">
            <donor d_prob="0.161" d_score="1.00"/>
            <acceptor a_prob="0.668" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="52984" g_stop="52911" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="200" r_stop="273" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="52910" i_stop="52808" i_length="103">
            <donor d_prob="0.577" d_score="1.00"/>
            <acceptor a_prob="0.765" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="52807" g_stop="52573" g_length="235"/>
          <reference_exon_boundary r_type="cDNA" r_start="274" r_stop="508" r_length="235" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="52572" i_stop="51036" i_length="1537">
            <donor d_prob="0.599" d_score="1.00"/>
            <acceptor a_prob="0.941" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="51035" g_stop="50732" g_length="304"/>
          <reference_exon_boundary r_type="cDNA" r_start="509" r_stop="812" r_length="304" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0066K03.2" gen_strand="-" ref_id="SGN-U315688" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>812</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0066K03.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U315688" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="53272" e_stop="53074"/>
          <exon e_start="52984" e_stop="52911"/>
          <exon e_start="52807" e_stop="52573"/>
          <exon e_start="51035" e_stop="50732"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCCTGTCTTATTCTCTTCAGATTTTGTTCATTTGCACGCAATGAAGATGACCTTCTTTGCACACGTGCTTGTCCTTCTCTGTTTCTGCTGTTGTCCAGTGGGTTCGGGTGTCATCTGAGTTCCCTTAACAAATTGAATGCAAGTGATGGTTCATATAAACTCTCAGGATATATCTCTGGTATGTTCACACAGTGAAGGTATACAGGCTCAAGTTGATGGATAGGAGATGTGATAAGTTTATCTTTTCTACACTTTATTTCCCTGACAATCACTGTTTAATTTGCAGGTCTTTCAATATTTTTGTATGAACTTATTTCAGTATATTTTCCTGAACAAAGAAAATGGAAACTAATCGTTGGGGTTAGCATTCACTTTATTGAATTCTTGTTTCTCACAGTGCATTTACTATATCGGTGCTTCAGTGCTTGTTTTCAGTGGTGTTCTTGTTTTCCTTGTAATGCAGATATCAATTCAAGATTTATTTCCAAAAGACCAACACATAAATTACTTAATAACATAGAGATGAGTTTTGGTAGTGCTTCTGACATTGAGTAGCGAAATAGATCTCAGATTTTTTTTTGAGACAGTAACAACAAAATAGATCTCAGATTTATCCACTGTGTTTTTTGAACCTGAACTGCTCAAGATCTTTACATGATTTGACTTTGGAGCCTTCAATGACCTCTGTGGAACTTAAGGTGAGAGTTTTTGTTGGCAATTATTATTTAAGTGTTGTGGGATTGGGAAACGAATGTGAGTCTTTGGTTTTATTTTTGTAGAATTGAGTTTCTTAGGTTTAGTTTTGTGAGAATTGGTTTGGGTTGCTTTATGTAAAATTTATTTCAAAACACCTAATCATTTTTTGGAACTTCAATATGTGTGAAATTAATATGTTAAAATTTGCCGAACATCATTATTTATTACCAATCGTATAGGATTTCAAAGTATTAAGATGGAACCCCTAACAGTTAGAAGGCCCTTGCGGCACATCTATTCCCAGAGAACACAATAATCTCCCCTTTGTTATGGGAGAATAATGCAAAACCACGTTTCTAGCTTCCTGTGGTTGCAAAAGCAAACAGACCAATTTTAAGACGGACATATGTCATACATACTTGTTTTACTGATTGGAGTATTGAATTTTGTATAACAATGTGTTTGCTGTTCTCCAAGACTGACAATTCTTCTGGTTTGAACTTAGTCTCCTGGTTCTCTTACCCAATCATTTCTGCTTCCCTTCGAATGAATTTTGCGATTTTCCTCAAAATTTACTTGATTTTCATTTATCTAGATATTTGCTACATCAATCTTCTTGGAGCCTTGATATCTTTAGGAGATGATGACATCCAGCTTTTATTGATTTTTGAGATCAGGGTGGAGAGGTGGCTCATATTGTTAGGAGTTTCACACTTGTAGGTCAATCCTGGTCCATCTAATCCACAAAAAATTCCGTTATTCAGAAAAATTGAACCCTATCAAAAAATTTAGGTTGATTTTCATTCTTCAGTTGTGGAGGTTGGAAACACAACTTTGACCTATTAAATATGCTAATACTGTTGATCTTTGGCATCCTTCTAGAGATTCAAGAGCTTTCGAGTTTTACTTTTTTATGTGTTCTTTGTTTTCAAAAGGTATCAACTTTTACCTCCTTACTGAGTTATTATCCTTTCTCTTTTTTGAAGTAATAAATGAGAGAACAATATAAATGATTTGGATCTTAGAGAAAGTGACTTCACTTGAACATATAACACTACTCTAATGCTCTGATGTGCAGCATAACTTCCTTTTTTGGCACCATTGATACGGACTGTGTTAATCTGATAAAGCTATTTTGATGTGTTTTAAAAGAATATCTTGTGGTGACTAATTGGTTCTTAATGGTACTTTTAGGATTTGCACCCTTTCCTTTTATTGTTGAGTATACTGTCGCGAATCTCTGGACTGGAAGTCACTCTGTCGGTGAAAGCATTTGTACTCGACATTTTTATGCAACATCACTTAGGATTCATTGTACTTGATATGATTTGTACATGTAGCTTTTGTCCACTCCACATTCCCTTCCCTGTATGCTGTAGCAGTCGTCCACTTGCCTCACTTAAAGATGGGGGGGGGGGGGGGATTCTGGAGGGTGGTTAGTGGAAGAGTATGCTATCATGTAGTTTATCACTATCTTCTCTTTAGCTACTTTTGAAAAAATCTAGATAGAATAAAGATTCCTCTAATGTTTACCTACAGAGGGTTATTTCCTGTTAAACATGAGGCTGCTGTCACATATGATTTTGGAAACATCGAACGTAATCTCTTGGTCCCTGCCATAAATAATTTGGAGAAAGAGGACTGCAAAGTGTGATCTCAATTTTATGCTCTTTCTAGTGAGAAGATGTCCAGAATAGAGGAACTTGTTACATGGGATGTTTATGGTTCAGGTCCTTCTGAATTCTATTATGATGGAGATGATTTGACACATGCAATCTCATGGTGAAGAGATTCTTAAGAATTATTTGATACCACGAGCTATGCTCTCC-TCTAGGGTGGATGG</genome_strand>
        <mrna_strand>TTTCCTGTCTTATTCTCTTCAGATTTTGTTCATTTGCACGCAATGAAGATGACCTTCTTTGCACACGTGCTTGTCCTTCTCTGTTTCTGCTGTTGTCCAGTGGGTTCGGGTGTCATCTGAGTTCCCTTAACAAATTGAATGCAAGTGATGGTTCATATAAACTCTCAGGATATATCTCTGGTATGTTCACACAGTGAAG.........................................................................................GTCTTTCAATATTTTTGTATGAACTTATTTCAGTATATTTTCCTGAACAAAGAAAATGGAAACTAATCGTTGGG.......................................................................................................ATATCAATTCAAGATTTATTTCCAAAAGACCAACACATAAATTACTTAATAACATAGAGATGAGTTTTGGTAGTGCTTCTGACATTGAGTAGCGAAATAGATCTCAGATTTTTTTTTGAGACAGTAACAACAAAATAGATCTCAGATTTATCCACTGTGTTTTTTGAACCTGAACTGCTCAAGATCTTTACATGATTTGACTTTGGAGCCTTCAATGACCTCTGTGGAACTTAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGGTTATTTCCTGTTAAACATGAGGCTGCTGTCACATATGATTTTGGAAACATCGAACGTAATCTCTTGGTCCCTGCCATAAATAATTTGGAGAAAGAGGACTGCAAAGTGTGATCTCAATTTTATGCTCTTTCTAGTGAGAAGATGTCCAGAATAGAGGAACTTGTTACATGGGATGTTTATGGTTCAGGTCCTTCTGAATTCTATTATGATGGAGATGATTTGACACATGCAATCTCATGGTGAAGAGATTCTTAAGAATTATTTGATACCACGAGCTATGCTCTCCNTCTA-GGTGGATGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-OMR5jX/lycopersicum_combined_unigene_seqs" ref_id="SGN-U315689" ref_strand="+" ref_description="SGN-U315689">
      <seq>gttcgttgcacagaagcctgatacatgatggatcatctttgtttattccagataatgggttcgggtgtcatctgagttcccttaacaaattgaatgcaagtgatggttcatataaactctcaggatatatctctggtatgttcacacagtgaaggtctttcaatatttttgtatgaacttatttcagtatattttcctgaacaaagaaaatggaaactaatcgttgggatatcaattcaagatttatttccaaaagaccaacacataaattacttaataacatagagatgagttttggtagtgcttctgacattgagtagcgaaatagatctcagatttttttttgagacagtaacaacaaaatagatctcagatttatccactgtgttttttgaacctgaactgctcaagatctttacatgatttgactttggagccttcaatgacctctgtggaacttaaggtccttctgaattctattatgatggagatgatttgacacatgcaatctcatggtgaagagattcttaggatttatttgataccacgagctatgctctcctctagg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-lbVmY/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0066K03.2" temp_strand="-" temp_description="C02SLm0066K03.2  submitted_to_sgn_as:C02Mbo0066K03 len=123077">
        <position start="53637" stop="50440"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="53337" g_stop="53283" g_length="55"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="55" r_length="55" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="53282" i_stop="53173" i_length="110">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.925" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="53172" g_stop="53074" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="56" r_stop="154" r_length="99" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="53073" i_stop="52985" i_length="89">
            <donor d_prob="0.161" d_score="1.00"/>
            <acceptor a_prob="0.668" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="52984" g_stop="52911" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="155" r_stop="228" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="52910" i_stop="52808" i_length="103">
            <donor d_prob="0.577" d_score="1.00"/>
            <acceptor a_prob="0.765" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="52807" g_stop="52573" g_length="235"/>
          <reference_exon_boundary r_type="cDNA" r_start="229" r_stop="463" r_length="235" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="52572" i_stop="50845" i_length="1728">
            <donor d_prob="0.599" d_score="1.00"/>
            <acceptor a_prob="0.765" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="50844" g_stop="50740" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="464" r_stop="568" r_length="105" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0066K03.2" gen_strand="-" ref_id="SGN-U315689" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>568</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0066K03.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U315689" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="53337" e_stop="53283"/>
          <exon e_start="53172" e_stop="53074"/>
          <exon e_start="52984" e_stop="52911"/>
          <exon e_start="52807" e_stop="52573"/>
          <exon e_start="50844" e_stop="50740"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTCGTTGCACAGAAGCCTGATACATGATGGATCATCTTTGTTTATTCCAGATAAGTTGAGGATATTTCCTGTCTTATTCTCTTCAGATTTTGTTCATTTGCACGCAATGAAGATGACCTTCTTTGCACACGTGCTTGTCCTTCTCTGTTTCTGCTGTTGTCCAGTGGGTTCGGGTGTCATCTGAGTTCCCTTAACAAATTGAATGCAAGTGATGGTTCATATAAACTCTCAGGATATATCTCTGGTATGTTCACACAGTGAAGGTATACAGGCTCAAGTTGATGGATAGGAGATGTGATAAGTTTATCTTTTCTACACTTTATTTCCCTGACAATCACTGTTTAATTTGCAGGTCTTTCAATATTTTTGTATGAACTTATTTCAGTATATTTTCCTGAACAAAGAAAATGGAAACTAATCGTTGGGGTTAGCATTCACTTTATTGAATTCTTGTTTCTCACAGTGCATTTACTATATCGGTGCTTCAGTGCTTGTTTTCAGTGGTGTTCTTGTTTTCCTTGTAATGCAGATATCAATTCAAGATTTATTTCCAAAAGACCAACACATAAATTACTTAATAACATAGAGATGAGTTTTGGTAGTGCTTCTGACATTGAGTAGCGAAATAGATCTCAGATTTTTTTTTGAGACAGTAACAACAAAATAGATCTCAGATTTATCCACTGTGTTTTTTGAACCTGAACTGCTCAAGATCTTTACATGATTTGACTTTGGAGCCTTCAATGACCTCTGTGGAACTTAAGGTGAGAGTTTTTGTTGGCAATTATTATTTAAGTGTTGTGGGATTGGGAAACGAATGTGAGTCTTTGGTTTTATTTTTGTAGAATTGAGTTTCTTAGGTTTAGTTTTGTGAGAATTGGTTTGGGTTGCTTTATGTAAAATTTATTTCAAAACACCTAATCATTTTTTGGAACTTCAATATGTGTGAAATTAATATGTTAAAATTTGCCGAACATCATTATTTATTACCAATCGTATAGGATTTCAAAGTATTAAGATGGAACCCCTAACAGTTAGAAGGCCCTTGCGGCACATCTATTCCCAGAGAACACAATAATCTCCCCTTTGTTATGGGAGAATAATGCAAAACCACGTTTCTAGCTTCCTGTGGTTGCAAAAGCAAACAGACCAATTTTAAGACGGACATATGTCATACATACTTGTTTTACTGATTGGAGTATTGAATTTTGTATAACAATGTGTTTGCTGTTCTCCAAGACTGACAATTCTTCTGGTTTGAACTTAGTCTCCTGGTTCTCTTACCCAATCATTTCTGCTTCCCTTCGAATGAATTTTGCGATTTTCCTCAAAATTTACTTGATTTTCATTTATCTAGATATTTGCTACATCAATCTTCTTGGAGCCTTGATATCTTTAGGAGATGATGACATCCAGCTTTTATTGATTTTTGAGATCAGGGTGGAGAGGTGGCTCATATTGTTAGGAGTTTCACACTTGTAGGTCAATCCTGGTCCATCTAATCCACAAAAAATTCCGTTATTCAGAAAAATTGAACCCTATCAAAAAATTTAGGTTGATTTTCATTCTTCAGTTGTGGAGGTTGGAAACACAACTTTGACCTATTAAATATGCTAATACTGTTGATCTTTGGCATCCTTCTAGAGATTCAAGAGCTTTCGAGTTTTACTTTTTTATGTGTTCTTTGTTTTCAAAAGGTATCAACTTTTACCTCCTTACTGAGTTATTATCCTTTCTCTTTTTTGAAGTAATAAATGAGAGAACAATATAAATGATTTGGATCTTAGAGAAAGTGACTTCACTTGAACATATAACACTACTCTAATGCTCTGATGTGCAGCATAACTTCCTTTTTTGGCACCATTGATACGGACTGTGTTAATCTGATAAAGCTATTTTGATGTGTTTTAAAAGAATATCTTGTGGTGACTAATTGGTTCTTAATGGTACTTTTAGGATTTGCACCCTTTCCTTTTATTGTTGAGTATACTGTCGCGAATCTCTGGACTGGAAGTCACTCTGTCGGTGAAAGCATTTGTACTCGACATTTTTATGCAACATCACTTAGGATTCATTGTACTTGATATGATTTGTACATGTAGCTTTTGTCCACTCCACATTCCCTTCCCTGTATGCTGTAGCAGTCGTCCACTTGCCTCACTTAAAGATGGGGGGGGGGGGGGGATTCTGGAGGGTGGTTAGTGGAAGAGTATGCTATCATGTAGTTTATCACTATCTTCTCTTTAGCTACTTTTGAAAAAATCTAGATAGAATAAAGATTCCTCTAATGTTTACCTACAGAGGGTTATTTCCTGTTAAACATGAGGCTGCTGTCACATATGATTTTGGAAACATCGAACGTAATCTCTTGGTCCCTGCCATAAATAATTTGGAGAAAGAGGACTGCAAAGTGTGATCTCAATTTTATGCTCTTTCTAGTGAGAAGATGTCCAGAATAGAGGAACTTGTTACATGGGATGTTTATGGTTCAGGTCCTTCTGAATTCTATTATGATGGAGATGATTTGACACATGCAATCTCATGGTGAAGAGATTCTTAAGAATTATTTGATACCACGAGCTATGCTCTCCTCTAGG</genome_strand>
        <mrna_strand>GTTCGTTGCACAGAAGCCTGATACATGATGGATCATCTTTGTTTATTCCAGATAA..............................................................................................................TGGGTTCGGGTGTCATCTGAGTTCCCTTAACAAATTGAATGCAAGTGATGGTTCATATAAACTCTCAGGATATATCTCTGGTATGTTCACACAGTGAAG.........................................................................................GTCTTTCAATATTTTTGTATGAACTTATTTCAGTATATTTTCCTGAACAAAGAAAATGGAAACTAATCGTTGGG.......................................................................................................ATATCAATTCAAGATTTATTTCCAAAAGACCAACACATAAATTACTTAATAACATAGAGATGAGTTTTGGTAGTGCTTCTGACATTGAGTAGCGAAATAGATCTCAGATTTTTTTTTGAGACAGTAACAACAAAATAGATCTCAGATTTATCCACTGTGTTTTTTGAACCTGAACTGCTCAAGATCTTTACATGATTTGACTTTGGAGCCTTCAATGACCTCTGTGGAACTTAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCTTCTGAATTCTATTATGATGGAGATGATTTGACACATGCAATCTCATGGTGAAGAGATTCTTAGGATTTATTTGATACCACGAGCTATGCTCTCCTCTAGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-OMR5jX/lycopersicum_combined_unigene_seqs" ref_id="SGN-U312531" ref_strand="+" ref_description="SGN-U312531">
      <seq>cacacttgttagtttctaataaacagaaacaaacagcagcagagaactgatcagaaaaacaaaaacaaaatggcagcctctctacaagcagctgctactcttatgcaaccaactaaggttggtggtgtctctgccagaaacaacttgccattgaggtcagctcaaagtttgagcaaggcatttggtcttgaaccatctgcatccaagctttcttgctctttgcaagctgatcttaaagattttgctcagaaatgcactgatgctgccaagattgcaggatttgcccttgccacttctgcccttgttgtctcaggagctaatgctgaaggagttccaaaacgtctaacctttgatgagatccagagcaagacatacatggaagtaaagggaactggaacagcaaaccagtgccctaccatagatggaggtgttgatagcttttccttcaagccaggcaaatacaacgccaagaagttctgcttagagccaacatcattcaccgtcaaggcagagggcgtaagcaaaaattcagccccagacttccaaaagaccaagcttatgactcgcttaacctacactttggatgagattgagggaccgtttgaagtatctcctgatggcactgttaaatttgaggagaaggatggaattgattacgctgctgttactgtccagcttcctggtggtgagcgtgttccgttcctcttcaccatcaaacaacttgtggcatctggaaagcctgagagcttcagtggcgacttccttgtgccatcctacagaggttcatcgtttcttgacccaaaaggcaggggtggatccactggttacgacaatgctgttgcattgccagctggaggcagaggagatgaggaggagctccagaaagagaacgtaaagaataccgcgtctttaacaggaaagatcacatttactgttaccaagagcaacccacagactggtgaggtgattggagtgtttgagagcattcagccatctgatactgatctgggggcaaagactcctaaggatgtaaaaatccagggtatctggtatgcccagcttgaatcatagacagatcttagactttgtggatcatttcttcgtttttgattttgttataagttactacaaggtttcaactttctatgacccaattggataagtaatgagacaactatcttcctgtaaaaaaaaaaaaaaaaaaaaaaaatccattaacatactgagttggcaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-lbVmY/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0066K03.2" temp_strand="+" temp_description="C02SLm0066K03.2  submitted_to_sgn_as:C02Mbo0066K03 len=123077">
        <position start="59422" stop="61398"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59722" g_stop="60033" g_length="312"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="312" r_length="312" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="60034" i_stop="60176" i_length="143">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="60177" g_stop="61106" g_length="930"/>
          <reference_exon_boundary r_type="cDNA" r_start="313" r_stop="1244" r_length="932" r_score="0.977"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0066K03.2" gen_strand="+" ref_id="SGN-U312531" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>1242</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0066K03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U312531" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59722" e_stop="60033"/>
          <exon e_start="60177" e_stop="61106"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACACTTGTTAGTTTCTAATAAACAGAAACAAACAGCAGCAGAGAACTGATCAGAAAAACAAAAACAAAATGGCAGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCAACTAAGGTTGGTGGTGTCTCTGCCAGAAACAACTTGCCATTGAGGTCAGCTCAAAGTTTGAGCAAGGCATTTGGTCTTGAACCATCTGCATCCAAGCTTTCTTGCTCTTTGCAAGCTGATCTTAAAGATTTTGCTCAGAAATGCACTGATGCTGCCAAGATTGCAGGATTTGCCCTTGCCACTTCTGCCCTTGTTGTCTCAGTAAGTTAATAGTGTTTTGTTAAAACTGCTCATTTTTTGGAATGATTATCTTGTCATCTATAGTTCATGTTCCTTTAGTTTTGTGTCCCTTTTTCTTTTGATGTCCTGTGTCTAAGAGAGAAATTTGCAACTTAATCATGTAGGGAGCTAATGCTGAAGGAGTTCCAAAACGTCTAACCTTTGATGAGATCCAGAGCAAGACATACATGGAAGTAAAGGGAACTGGAACAGCAAACCAGTGCCCTACCATAGATGGAGGTGTTGATAGCTTTTCCTTCAAGCCAGGCAAATACAACGCCAAGAAGTTCTGCTTAGAGCCAACATCATTCACCGTCAAGGCAGAGGGCGTAAGCAAAAATTCAGCCCCAGACTTCCAAAAGACCAAGCTTATGACTCGCTTAACCTACACTTTGGATGAGATTGAGGGACCGTTTGAAGTATCTCCTGATGGCACTGTTAAATTTGAGGAGAAGGATGGAATTGATTACGCTGCTGTTACTGTCCAGCTTCCTGGTGGTGAGCGTGTTCCGTTCCTCTTCACCATCAAACAACTTGTGGCATCTGGAAAGCCTGAGAGCTTCAGTGGCGACTTCCTTGTGCCATCCTACAGAGGTTCATCGTTTCTTGACCCAAAAGGCAGGGGTGGATCCACTGGTTACGACAATGCTGTTGCATTGCCAGCTGGAGGCAGAGGAGATGAGGAGGAGCTCCAGAAAGAGAACGTAAAGAATACCGCGTCTTTAACAGGAAAGATCACATTTACTGTTACCAAGAGCAACCCACAGACTGGTGAGGTGATTGGAGTGTTTGAGAGCATTCAGCCATCTGATACTGATCTGGGGGCAAAGACTCCTAAGGATGTAAAAATCCAGGGTATCTGGTATGCCCAGCTTGAATCATAGACAGATCTTAGACTTTGTGGATCATTTCTTCGTTTTTGATTTTGTTATAAGTTACTACAAGGTTTCAACTTTCTATGACCCAATTGGATAAGTAATGAGACAACTATCTTCCTGT-ATATTATCAAGTATAAGTAATAATCCATTAACATACTGAGTT-GCAAAATGCTGATA</genome_strand>
        <mrna_strand>CACACTTGTTAGTTTCTAATAAACAGAAACAAACAGCAGCAGAGAACTGATCAGAAAAACAAAAACAAAATGGCAGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCAACTAAGGTTGGTGGTGTCTCTGCCAGAAACAACTTGCCATTGAGGTCAGCTCAAAGTTTGAGCAAGGCATTTGGTCTTGAACCATCTGCATCCAAGCTTTCTTGCTCTTTGCAAGCTGATCTTAAAGATTTTGCTCAGAAATGCACTGATGCTGCCAAGATTGCAGGATTTGCCCTTGCCACTTCTGCCCTTGTTGTCTCA...............................................................................................................................................GGAGCTAATGCTGAAGGAGTTCCAAAACGTCTAACCTTTGATGAGATCCAGAGCAAGACATACATGGAAGTAAAGGGAACTGGAACAGCAAACCAGTGCCCTACCATAGATGGAGGTGTTGATAGCTTTTCCTTCAAGCCAGGCAAATACAACGCCAAGAAGTTCTGCTTAGAGCCAACATCATTCACCGTCAAGGCAGAGGGCGTAAGCAAAAATTCAGCCCCAGACTTCCAAAAGACCAAGCTTATGACTCGCTTAACCTACACTTTGGATGAGATTGAGGGACCGTTTGAAGTATCTCCTGATGGCACTGTTAAATTTGAGGAGAAGGATGGAATTGATTACGCTGCTGTTACTGTCCAGCTTCCTGGTGGTGAGCGTGTTCCGTTCCTCTTCACCATCAAACAACTTGTGGCATCTGGAAAGCCTGAGAGCTTCAGTGGCGACTTCCTTGTGCCATCCTACAGAGGTTCATCGTTTCTTGACCCAAAAGGCAGGGGTGGATCCACTGGTTACGACAATGCTGTTGCATTGCCAGCTGGAGGCAGAGGAGATGAGGAGGAGCTCCAGAAAGAGAACGTAAAGAATACCGCGTCTTTAACAGGAAAGATCACATTTACTGTTACCAAGAGCAACCCACAGACTGGTGAGGTGATTGGAGTGTTTGAGAGCATTCAGCCATCTGATACTGATCTGGGGGCAAAGACTCCTAAGGATGTAAAAATCCAGGGTATCTGGTATGCCCAGCTTGAATCATAGACAGATCTTAGACTTTGTGGATCATTTCTTCGTTTTTGATTTTGTTATAAGTTACTACAAGGTTTCAACTTTCTATGACCCAATTGGATAAGTAATGAGACAACTATCTTCCTGTAAAAAAAAAAAAAAAAAAAAAAAATCCATTAACATACTGAGTTGGCAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-OMR5jX/lycopersicum_combined_unigene_seqs" ref_id="SGN-U312529" ref_strand="+" ref_description="SGN-U312529">
      <seq>cgtaaagaacaccgcgtctttacatggaagaccaaccctttaccgttacccaagagcaacccacagactggtgaggtgattggagtgtttgagagcattcagccatctgatacctgatctgggggcaaagactcctaaggatgtaaaaatccagggtatctggtatgcccagcttgaatcatagacagatcttagactttgtggatcatttcttcgtttttgattttgttataagttactacaaggtttcaactttctatgacccaattggataagtaatagaacaactatctcctgtatatatcaagtataagtaataatccatta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-lbVmY/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0066K03.2" temp_strand="+" temp_description="C02SLm0066K03.2  submitted_to_sgn_as:C02Mbo0066K03 len=123077">
        <position start="60455" stop="61380"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="60755" g_stop="61080" g_length="326"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="327" r_length="327" r_score="0.939"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0066K03.2" gen_strand="+" ref_id="SGN-U312529" ref_strand="+">
        <total_alignment_score>0.939</total_alignment_score>
        <cumulative_length_of_scored_exons>326</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0066K03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U312529" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="60755" e_stop="61080"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGTAAAGAATACCGCGTCTTTAACAGGAAAGATC-A-CATTTACTGTTAC-CAAGAGCAACCCACAGACTGGTGAGGTGATTGGAGTGTTTGAGAGCATTCAGCCATCTGATA-CTGATCTGGGGGCAAAGACTCCTAAGGATGTAAAAATCCAGGGTATCTGGTATGCCCAGCTTGAATCATAGACAGATCTTAGACTTTGTGGATCATTTCTTCGTTTTTGATTTTGTTATAAGTTACTACAAGGTTTCAACTTTCTATGACCCAATTGGATAAGTAATGAGACAACTATCTTCCTGTATATTATCAAGTATAAGTAATAATCCATTA</genome_strand>
        <mrna_strand>CGTAAAGAACACCGCGTCTTT-ACATGGAAGACCAACCCTTTACCGTTACCCAAGAGCAACCCACAGACTGGTGAGGTGATTGGAGTGTTTGAGAGCATTCAGCCATCTGATACCTGATCTGGGGGCAAAGACTCCTAAGGATGTAAAAATCCAGGGTATCTGGTATGCCCAGCTTGAATCATAGACAGATCTTAGACTTTGTGGATCATTTCTTCGTTTTTGATTTTGTTATAAGTTACTACAAGGTTTCAACTTTCTATGACCCAATTGGATAAGTAATAGAACAACTATC-TCCTGTATA-TATCAAGTATAAGTAATAATCCATTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-OMR5jX/lycopersicum_combined_unigene_seqs" ref_id="SGN-U326789" ref_strand="+" ref_description="SGN-U326789">
      <seq>ggacagggatatttagtgcaatttatcctaaaaactttaacccaaatacgacgggagccttatcttctcgtggctgaaactgtagaaagcttgtctatttcactgtttttttttaattaattatacattaattctgtagtttgtagtttgttgaatggggagtattgctgcatattgtggtggattgctatgttgttcggagttacgatcgagcaattcaaggatagtttcgggcttatcggtgttggaacaggtggataaggagttgacgaagggagatgaaagggctgctttgtctcttgtcaaggatttgcagggaaaacctggtggccttcggtgttttggcgctgctagacaggtaccacagaggctgtattccttagatgaattgaagttgaatggaatagaagccatatctcttctgtcaccagttgatgctacccttggagcaattgaaagaaatctgcaaattgctgctatattaagtggttctgcagcatggtatgcgcttgatttgagcccacaacagatcctttttgtttctctgggggttctgtttctgtggactctggacttggtttctttcaatggaggagttggtactttggtccttgacacaattggccatacattcagtcagaagtaccataacagggttattcaacatgaagctgggcatttcttgattgcctacttgctgggtattcttcccaaggggtatacactcaccagtttggatgctttgaagaaggaaggatcgttgaacatccaagcaggaacagcctttgtggacttagaatttattgaggaagtaaatagaggaaaagtaacagccacgatgctgaacaggttttcatgtattgcgctagcaggtgtagcaactgagtatcttctgtttgggtatgctgagggaggtctgtctgacattaatcagttggatgcattactgaaaagcttgggatttacacagaagaaagcagattctcaggtgagatgggctgtattgaacacaatcctcattttgcgacgccacgagaaggcacgatcgaagcttgcagaggcaatgactcaagggaaatctgtgggcgtctgcattgacatcattgagaaatccatcagcgatgatgatttgtagcttcatatttcttaagatccaccatataattctgatatcccctgtgatactccttcattctctatatagattatagagtgaccttttgtgtgaaattaaaatgaagttattgctaacaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-lbVmY/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0066K03.2" temp_strand="-" temp_description="C02SLm0066K03.2  submitted_to_sgn_as:C02Mbo0066K03 len=123077">
        <position start="65753" stop="61350"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="65454" g_stop="65097" g_length="358"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="358" r_length="358" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="65096" i_stop="64597" i_length="500">
            <donor d_prob="0.928" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="64596" g_stop="64378" g_length="219"/>
          <reference_exon_boundary r_type="cDNA" r_start="359" r_stop="577" r_length="219" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="64377" i_stop="63567" i_length="811">
            <donor d_prob="0.974" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="63566" g_stop="63480" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="578" r_stop="664" r_length="87" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="63479" i_stop="63090" i_length="390">
            <donor d_prob="0.888" d_score="1.00"/>
            <acceptor a_prob="0.873" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="63089" g_stop="62943" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="665" r_stop="811" r_length="147" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="62942" i_stop="62778" i_length="165">
            <donor d_prob="0.943" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="62777" g_stop="62751" g_length="27"/>
          <reference_exon_boundary r_type="cDNA" r_start="812" r_stop="838" r_length="27" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="62750" i_stop="62666" i_length="85">
            <donor d_prob="0.981" d_score="0.00"/>
            <acceptor a_prob="0.973" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="62665" g_stop="62570" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="839" r_stop="934" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="62569" i_stop="61965" i_length="605">
            <donor d_prob="0.966" d_score="1.00"/>
            <acceptor a_prob="0.951" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="61964" g_stop="61653" g_length="312"/>
          <reference_exon_boundary r_type="cDNA" r_start="935" r_stop="1246" r_length="312" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="1250" polyA_stop="1273"/>
      <MATCH_line gen_id="C02SLm0066K03.2" gen_strand="-" ref_id="SGN-U326789" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>1246</cumulative_length_of_scored_exons>
        <coverage percentage="0.979" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0066K03.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U326789" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="65454" e_stop="65097"/>
          <exon e_start="64596" e_stop="64378"/>
          <exon e_start="63566" e_stop="63480"/>
          <exon e_start="63089" e_stop="62943"/>
          <exon e_start="62777" e_stop="62751"/>
          <exon e_start="62665" e_stop="62570"/>
          <exon e_start="61964" e_stop="61653"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGACAGGGATATTTAGTGCAATTTATCCTAAAAACTTTAACCCAAATACGACGGGAGCCTTATCTTCTCGTGGCTGAAACTGTAGAAAGCTTGTCTATTTCACTGTTTTTTTTTAATTAATTATACATTAATTCTGTAGTTTGTAGTTTGTTGAATGGGGAGTATTGCTGCATATTGTGGTGGATTGCTATGTTGTTCGGAGTTACGATCGAGCAATTCAAGGATAGTTTCGGGCTTATCGGTGTTGGAACAGGTGGATAAGGAGTTGACGAAGGGAGATGAAAGGGCTGCTTTGTCTCTTGTCAAGGATTTGCAGGGAAAACCTGGTGGCCTTCGGTGTTTTGGCGCTGCTAGACAGGTTTGTTTTTGCAATGTTCTCTTCATCCGGATCAATTCAGTAGGCACAGTCCCTACAAATTCACGTTTGATAGGTTTTCACTGTTTTTATTCTACCTATTGCATAGTTTTAAGCTGATGGCACAGCTTTGGTATGGGTTACACTGACTACGTTGTTGTTCTGATTTTAAGGCATTGTTGTATAAATGAGTATAATCTACTTTCCTTTTGTTGATTAATCTTTTTGCATTTGTTATAAAGTTTTTAGTTATATATAGAGATATAAATGGTTTGTAAGAAAGGGTGAAATCTTACTTAGTTGTTAGTGATTAGCCGGGCTTAGTGGTAAACTACATCTAGTTAGGTTGAATAATTAATCGTTATGATTTTATTGGACAGACATTGGTCTTGTTATTCTCAGAAATCTGCTTTAAGTTTACAAGTTTATTGAAGAAACATTTGCCTTGTTTCTCTGAGCTTATGTAGGAAAACTGGTTTAACTTTATGTGTAGGCTCATGCAGGTACCACAGAGGCTGTATTCCTTAGATGAATTGAAGTTGAATGGAATAGAAGCCATATCTCTTCTGTCACCAGTTGATGCTACCCTTGGAGCAATTGAAAGAAATCTGCAAATTGCTGCTATATTAAGTGGTTCTGCAGCATGGTATGCGCTTGATTTGAGCCCACAACAGATCCTTTTTGTTTCTCTGGGGGTTCTGTTTCTGTGGACTCTGGACTTGGTAAACTCTTAAGATGCCTGTCAATTTGTCTTCTGGAATTTCTCTATGGCTGTTCATAGAGCAATTTTTGTATCTTTTCGTTAGAAACTTCTTGAAAATTTGTTCCGAAGGTTAGAGTCATGTTATTCACCAAGCAATTGATTTGCTGTGAGTTTTACAAGATTGATTGCTGCTTTTCTTCCATAGAAACTCAAAATTTAGTTTTACTTTAAACAAATTGCTAGGAACAAAAACCGCATTTATAGTAGTTACCAGCTTTAATTTTCTTTTATAGAAGATATTCTGAAAGAGATAAATCTACAACAGATAAGTTAAAAAGAAAATCTACAACAGAAGAGGGCAAGAACTGAATACCAACTGACATAAGAAAAATCACCAATATGAGCAAAGTCTCCAATATAGTGCTGCGATAGCTTTACTCCAAAAAGGGTTGTCAAAGACTAACTTATCACATGCATGTCAATTTATGAAATCACTCTGTAAGAACTAAGCTTTCATGAAACAGTCACTATTGACATATCCAGATAAAAAACACTTTTTCTTTCCCCGTGTTGCCATTTCTCTACGTTTGAAAATCACACTGGGGACATGGTCATGATAATTTGCTAGTTTCATGTTATGTCATATTTCAGGAATATAAAGGAGAACAATCTTAACCCTGTGATAACAGTTTACACTCTTGTTTATGTATATTTGACTGTTAGTCTACTTAGTGAGTCAACAGAGGTGAAAGTAAGAAGTGTAAAATATGGAGTTATGTGTTCTGAGACATTTCAAACATGATAACTGAGTTATCCATATTTGTGCATAGGTTTCTTTCAATGGAGGAGTTGGTACTTTGGTCCTTGACACAATTGGCCATACATTCAGTCAGAAGTACCATAACAGGGTTATTCAAGTGAGATTCATCACTCTCATTCTCTCTCTGTCTCCCTCTCTTCACCTACACATACGAACACACACTACAGAGTATTTAGTTTTCAACTTTTTCTCGAAAAAACAACTAAATAGGTTCTAGTTTTCAACTTCCTTTGATTGTAACATCTTGCAAAAGACTTACAGATTGATTGATATTCAGAATTTGTTTCTTCATTTTCACTTTCTTGCTTCTTCTCAAAAAAAAAAAATAATTCATGTTCCTGCTAATTGCAATGTCCTTCATACACAAGTATTTAATTTCCTTATCATTTACCTCTACTTTTCTCTTTCTGAAAATCATTATTAGTTTGGCTTTTCTTTTCTGTGACTTGTCTTGTAACAAGCTGTTGATTCCCCAATTCTGTTCTAGCATGAAGCTGGGCATTTCTTGATTGCCTACTTGCTGGGTATTCTTCCCAAGGGGTATACACTCACCAGTTTGGATGCTTTGAAGAAGGAAGGATCGTTGAACATCCAAGCAGGAACAGCCTTTGTGGACTTAGAATTTATTGAGGAAGTAGGTAGTCTCCTATCAATTTTTTTAACCTCCAGTAAAGCTTTTCAGTTTTGGTTGTTCCTTGAATATTACTCTTTCTTCTCCTTTAAGCTTTCTGGGCTGGGCAATAATGATTTGTGTATAATTATTCTTTTTCTAGTTTGACCCTGATTCATTGCCGTGCAGGTAAATAGAGGAAAAGTAACAGCCACGGTATTGATCTCTGTCATAATTATCACGTATGTTTATTTCTGTGACCTGTTATATGATTCCTTCACTAATAATGCACTTCTAACAGATGCTGAACAGGTTTTCATGTATTGCGCTAGCAGGTGTAGCAACTGAGTATCTTCTGTTTGGGTATGCTGAGGGAGGTCTGTCTGACATTAATCAGGTTCATGTTATTCCTATGCCTCCTATAATCTGAAGAAAATCTAACTTTCTAGGTTTATTTTGCTCAGTTCATATCTCAACTGAGTGGGACATTTAAAGACATCATATGGTACACTGAGAATTTTACTATTTGAAGTGCAATAAACAGCTACTGCAGTTCTTATATACTCTTGTTCTAAGAAGAATAAGAGCTATTAATATGAGAAACTGCTATATTTCCATTAAACAATATTGCTCCTACCTAGATTTATCGTAGATTGTTATTCACTTTCATGCATAAAGAGCTCGGTCTTCCACCTGCTACTTTTTCTTGATGCAATTGTATAAGGCTGAGATCCCTACATCCTTTCTCTAGATATTGTACATTTGTTCAGTTTTCACCAAAATGATTGATTCTATATAGAAATAAATAGTGATGGGATAAAGTTTTCGTACCTTGTTTGATCGCCATGTTTGAGATAACTTATCCTACCATTATACATAGTGATAGGATGAGGTGGGATAAGTAGTCCTAGGATGACTTATAACTTATCCAGGGATAAATTTTTCCCAACCAAATGGCCCCAAATGTTAAACAAAGGCTAATAAATTTTTCCTGCTTGACAGTTGGATGCATTACTGAAAAGCTTGGGATTTACACAGAAGAAAGCAGATTCTCAGGTGAGATGGGCTGTATTGAACACAATCCTCATTTTGCGACGCCACGAGAAGGCACGATCGAAGCTTGCAGAGGCAATGACTCAAGGGAAATCTGTGGGCGTCTGCATTGACATCATTGAGAAATCCATCAGCGATGATGATTTGTAGCTTCATATTTCTTAAGATCCACCATATAATTCTGATATCCCCTGTGATACTCCTTCATTCTCTATATAGATTATAGAGTGACCTTTTGTGTGAAATTAAAATGAAGTTATT</genome_strand>
        <mrna_strand>GGACAGGGATATTTAGTGCAATTTATCCTAAAAACTTTAACCCAAATACGACGGGAGCCTTATCTTCTCGTGGCTGAAACTGTAGAAAGCTTGTCTATTTCACTGTTTTTTTTTAATTAATTATACATTAATTCTGTAGTTTGTAGTTTGTTGAATGGGGAGTATTGCTGCATATTGTGGTGGATTGCTATGTTGTTCGGAGTTACGATCGAGCAATTCAAGGATAGTTTCGGGCTTATCGGTGTTGGAACAGGTGGATAAGGAGTTGACGAAGGGAGATGAAAGGGCTGCTTTGTCTCTTGTCAAGGATTTGCAGGGAAAACCTGGTGGCCTTCGGTGTTTTGGCGCTGCTAGACAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACCACAGAGGCTGTATTCCTTAGATGAATTGAAGTTGAATGGAATAGAAGCCATATCTCTTCTGTCACCAGTTGATGCTACCCTTGGAGCAATTGAAAGAAATCTGCAAATTGCTGCTATATTAAGTGGTTCTGCAGCATGGTATGCGCTTGATTTGAGCCCACAACAGATCCTTTTTGTTTCTCTGGGGGTTCTGTTTCTGTGGACTCTGGACTTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTCTTTCAATGGAGGAGTTGGTACTTTGGTCCTTGACACAATTGGCCATACATTCAGTCAGAAGTACCATAACAGGGTTATTCAA......................................................................................................................................................................................................................................................................................................................................................................................................CATGAAGCTGGGCATTTCTTGATTGCCTACTTGCTGGGTATTCTTCCCAAGGGGTATACACTCACCAGTTTGGATGCTTTGAAGAAGGAAGGATCGTTGAACATCCAAGCAGGAACAGCCTTTGTGGACTTAGAATTTATTGAGGAA.....................................................................................................................................................................GTAAATAGAGGAAAAGTAACAGCCACG.....................................................................................ATGCTGAACAGGTTTTCATGTATTGCGCTAGCAGGTGTAGCAACTGAGTATCTTCTGTTTGGGTATGCTGAGGGAGGTCTGTCTGACATTAATCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGATGCATTACTGAAAAGCTTGGGATTTACACAGAAGAAAGCAGATTCTCAGGTGAGATGGGCTGTATTGAACACAATCCTCATTTTGCGACGCCACGAGAAGGCACGATCGAAGCTTGCAGAGGCAATGACTCAAGGGAAATCTGTGGGCGTCTGCATTGACATCATTGAGAAATCCATCAGCGATGATGATTTGTAGCTTCATATTTCTTAAGATCCACCATATAATTCTGATATCCCCTGTGATACTCCTTCATTCTCTATATAGATTATAGAGTGACCTTTTGTGTGAAATTAAAATGAAGTTATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-OMR5jX/lycopersicum_combined_unigene_seqs" ref_id="SGN-U330990" ref_strand="+" ref_description="SGN-U330990">
      <seq>ttaatttctatcggaaattagggcaaattctttgcttaagtcttcgagagaaagcatccgaggcttctccctcttctacttgtgggttcaggttatttgcaattgtcatgattgataaaaaaattgacagtaaagatgtggaagctctacagcagaatggagatgagagtagatctcttcaaataaagtttctgtttttcgcccgtgctagagatctgactggcatgactgaaatgccattggaagtttcttatggtagtactgccggtgactgcttgaataaggtcatttctcactttccacggttggaagagatacgtgggtgcatgcttcttgcccggaatgaggaatacacagccgaatccaccactgttaaagatggagatgaattggccattatacctcctattagtggaggctaactcagttcctgaactgcaattatcggaactctattttacttgtatttatgtgtgtgatcatattactaagctgtgttatttattccctaataatacaagaacaaaattctcttgctaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-lbVmY/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0066K03.2" temp_strand="+" temp_description="C02SLm0066K03.2  submitted_to_sgn_as:C02Mbo0066K03 len=123077">
        <position start="67903" stop="70863"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="68203" g_stop="68293" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="91" r_length="91" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="68294" i_stop="70112" i_length="1819">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.934" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="70113" g_stop="70570" g_length="458"/>
          <reference_exon_boundary r_type="cDNA" r_start="92" r_stop="549" r_length="458" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0066K03.2" gen_strand="+" ref_id="SGN-U330990" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>549</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0066K03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U330990" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="68203" e_stop="68293"/>
          <exon e_start="70113" e_stop="70570"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTAATTTCTATCGGAAATTAGGGCAAATTCTTTGCTTAAGTCTTCGAGAGAAAGCATCCGAGGCTTCTCCCTCTTCTACTTGTGGGTTCAGGTATATTCGACCTTCTGTAATTCCTCTTTGACCAGTTCTTATGTGAATACAGTTTTTTGGTTTTGGGTGAATTCTCAAATTATCATACGAAGAGGCAATGAAAATTGCTCTATAAGTTGATTCAGCTCTTAGAAAATTGGACAATTTGCTAAAATCACATGTTTCAGAGAATTTGACCTTATTCTGAAAGATGCTAATTAACTACTCTCTTGTTATTATATACTTTGCTTATACTTAGATGCCTAAAACAGAATTATATGTTCCAGTTACTTGGAGAATACATGTTCATTGAGGAGTCACGTAGATTGTTTATGGATTTAACTTGAATCTATTTACCAGTTTGACACAAAACATCCAAAAAAAAATTGAAAAAAAAGGAAAGAAATCGAAAAGATGATCATCAGATTGGAACAGAAATTTCGTAGGTAGTTGTGCAAATGTCTTAGCTGATAAACACACATATACTCGGTTTTAGGCAACAGATTAAAAGAAAATAAAAAATAAATTAAGAACTAAGAAGAGAATCTTTTCGGTGCTCTCTTAATTTAGTGTTTACTTCCCTATTTGGGAGGTTTGTGGGGGCTGAGGGGAGGTGTAGCCTGCCATGAATCCCATTGATCTATAAACAAGGACAGCAGACATGAGCCTTATCAGGATGACAACAACAACAACGTACCCAGTGAGCCTTACCAGGATGATTAGTTCTTAACGACAGTTATCGAACTTATATTTTCTTTCAATCCAAATCAAAGTTAAATTGAATAGATACTCATGTCTTCTTTTGAAATGGTTCATAACCAAATTTTGTGTAAATTAAGCTTGAAACTTTATTTGGAATTCAACAAGTTAATGGATTAGTATATGAGTGAAATCTGGAAGCGTAGTCTGATTGTATCTATAACATAGCATAGTCGGGTGTTATGCCTTCAACAAATTGGTGTATCTTTATCCTATCTACTTCCTGATGTGGTTAGCTGTTTGCTATGCTTTCTCCTTCTTTTTTGGGGGGGTGGGGCGGGGTGGGGCTGTGTTTTGACTGAATCCTATAAATTGATCTTAGCTTCCAAAAAAATATGCTGTGTCATCTTTTATCATTTGTTTCTCAAGTAAGTTTGTCACTTTTTGTTGTTACTAGGAAATACAACTCTTCGATACTCTTTTAGTCTGTGCCAATTTTTCTAGTTTCTTTCTTACTTAAGTTTTATTTTGCTGTTACTAGGAAATCCAATACTTCTATACTATTTTAGTTTGTGTCATTTTTCTCATTTCTTTCTTAAATAAGTTTGTGACTTTCTGCCGTTACTTGGAAATCCAACTCTTCTATACTCTTTACAAGTTTATCTTAACCATAATGTAAGTACATACATGGATGTAGTGAACTTGGCTTGAATTTACCCTTTCTTTTTAGTTCTCTTGACTCATTTTAAAATGACTGTTAATTCTGCATTGAACTTAATGTTGTAAAAGAAGGAACATCATTTTCTTTCACTGTGAAGTGTGTGGACATGGGTTAATGGTTTTGGTCAATTGCAAATGCATTGTTTTCCATTACATAAGATGTTGGTCACTTTTGGTCATGTTAACATAGTTCTAAATTCAATTCTATTTTTGTGTCTTTAGTTAGTCTACTTATAGTCAGTGTTTAACTTACTTTTAGATTTCAACTTCTTGTAGAAGTTTAATTATTTAGTTGTATTTTCTTAGGAAAAAGTAACAGATCCTTTTAAATACTCAGTTATTCTTTAATTCTAGAGGGCGAATAGTCATTGTCGGAGCATAACTGATAGACGTTACCCCTACTGTTGAATATACTGGACAGGTTATTTGCAATTGTCATGATTGATAAAAAAATTGACAGTAAAGATGTGGAAGCTCTACAGCAGAATGGAGATGAGAGTAGATCTCTTCAAATAAAGTTTCTGTTTTTCGCCCGTGCTAGAGATCTGACTGGCATGACTGAAATGCCATTGGAAGTTTCTTATGGTAGTACTGCCGGTGACTGCTTGAATAAGGTCATTTCTCACTTTCCACGGTTGGAAGAGATACGTGGGTGCATGCTTCTTGCCCGGAATGAGGAATACACAGCCGAATCCACCACTGTTAAAGATGGAGATGAATTGGCCATTATACCTCCTATTAGTGGAGGCTAACTCAGTTCCTGAACTGCAATTATCGGAACTCTATTTTACTTGTATTTATGTGTGTGATCATATTACTAAGCTGTGTTATTTATTCCCTAATAATACAAGAACAAAATTCTCTTGCTAAAATCATTGA</genome_strand>
        <mrna_strand>TTAATTTCTATCGGAAATTAGGGCAAATTCTTTGCTTAAGTCTTCGAGAGAAAGCATCCGAGGCTTCTCCCTCTTCTACTTGTGGGTTCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTATTTGCAATTGTCATGATTGATAAAAAAATTGACAGTAAAGATGTGGAAGCTCTACAGCAGAATGGAGATGAGAGTAGATCTCTTCAAATAAAGTTTCTGTTTTTCGCCCGTGCTAGAGATCTGACTGGCATGACTGAAATGCCATTGGAAGTTTCTTATGGTAGTACTGCCGGTGACTGCTTGAATAAGGTCATTTCTCACTTTCCACGGTTGGAAGAGATACGTGGGTGCATGCTTCTTGCCCGGAATGAGGAATACACAGCCGAATCCACCACTGTTAAAGATGGAGATGAATTGGCCATTATACCTCCTATTAGTGGAGGCTAACTCAGTTCCTGAACTGCAATTATCGGAACTCTATTTTACTTGTATTTATGTGTGTGATCATATTACTAAGCTGTGTTATTTATTCCCTAATAATACAAGAACAAAATTCTCTTGCTAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-OMR5jX/lycopersicum_combined_unigene_seqs" ref_id="SGN-U333378" ref_strand="+" ref_description="SGN-U333378">
      <seq>gtgccgaattcggcacgagggtcgagcagagcctccccaccggaagagacactcggcaaaacattgcgtgcctgtcattctcaaccgttatctatgatggagtatgcacaaaatgcttcttcaaatgtaatcagtttggcagagcatctaggcacccgtatctctgatcacgttcctgatacaccaaacaagctgtccgaggatatgataaagtgcatgtgcaccatatatagcaagcttgctgatcctccactgacaaatcccggtctttcatcgccaacctcatccttgtcttccataagtgcattttccccaaaagacatatggagtccaggatttaggaatgattcatcttttgatgttcggctggacaatccttttcatgtagaagggttgaaggagttcagtggaccttacagcacaatgattgaagtacagtgtgtatatagagatactcagaaattgggcgatattgaaccgatgttacagcacttcaggtcacttatttctcgcctagaacaaattgatccacgaaagttgagtcacgaagagaagatagcattctggcttaacgtacataatgcattggtgatgcatgcatttctagcttacggtatcccccaaaacaatgtcaagagaatatttctactcttgaaggctgcctataatgttggaggccatgtagtaagtgcagatatgatacagaactctatcctgggatgtcgaatgtccagaccaggacagtggcttcgcttggtactttcttctaaaggaaaattcaagactggggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-lbVmY/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0066K03.2" temp_strand="-" temp_description="C02SLm0066K03.2  submitted_to_sgn_as:C02Mbo0066K03 len=123077">
        <position start="89635" stop="87593"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="89335" g_stop="89254" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="21" r_stop="102" r_length="82" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="89253" i_stop="89088" i_length="166">
            <donor d_prob="0.845" d_score="1.00"/>
            <acceptor a_prob="0.931" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="89087" g_stop="88693" g_length="395"/>
          <reference_exon_boundary r_type="cDNA" r_start="103" r_stop="497" r_length="395" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="88692" i_stop="88608" i_length="85">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.952" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="88607" g_stop="88508" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="498" r_stop="597" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="88507" i_stop="88405" i_length="103">
            <donor d_prob="0.928" d_score="1.00"/>
            <acceptor a_prob="0.723" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="88404" g_stop="88345" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="598" r_stop="657" r_length="60" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="88344" i_stop="88271" i_length="74">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="88270" g_stop="88184" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="658" r_stop="744" r_length="87" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="88183" i_stop="87939" i_length="245">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.719" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="87938" g_stop="87892" g_length="47"/>
          <reference_exon_boundary r_type="cDNA" r_start="745" r_stop="791" r_length="47" r_score="0.957"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0066K03.2" gen_strand="-" ref_id="SGN-U333378" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>771</cumulative_length_of_scored_exons>
        <coverage percentage="0.975" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0066K03.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U333378" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="89335" e_stop="89254"/>
          <exon e_start="89087" e_stop="88693"/>
          <exon e_start="88607" e_stop="88508"/>
          <exon e_start="88404" e_stop="88345"/>
          <exon e_start="88270" e_stop="88184"/>
          <exon e_start="87938" e_stop="87892"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCGAGCAGAGCCTCCCCACCGGAAGAGACACTCGGCAAAACATTGCGTGCCTGTCATTCTCAACCGTTATCTATGATGGAGGTAATTTGCAATCACGGAGATGAATTTTCGTTGCACTTTCTGCTATTTGAGGGACGGATTATTTTTATTATTGTTGCATCTAGATATATGATGACTCAGAAGTGTTCTTTTAAAAAACAATTAACAGCTTAAAAATTTGAGTCTCTCTTTTACGACTTCTTTGCAGTATGCACAAAATGCTTCTTCAAATGTAATCAGTTTGGCAGAGCATCTAGGCACCCGTATCTCTGATCACGTTCCTGATACACCAAACAAGCTGTCCGAGGATATGATAAAGTGCATGTGCACCATATATAGCAAGCTTGCTGATCCTCCACTGACAAATCCCGGTCTTTCATCGCCAACCTCATCCTTGTCTTCCATAAGTGCATTTTCCCCAAAAGACATATGGAGTCCAGGATTTAGGAATGATTCATCTTTTGATGTTCGGCTGGACAATCCTTTTCATGTAGAAGGGTTGAAGGAGTTCAGTGGACCTTACAGCACAATGATTGAAGTACAGTGTGTATATAGAGATACTCAGAAATTGGGCGATATTGAACCGATGTTACAGCACTTCAGGTAAGAACATATGAGATTCAGGCACCTCATATCATGAGCTTAACCTTTATTGACGTATGGTGCTCCTTGAGGTGTCATATTGCAGGTCACTTATTTCTCGCCTAGAACAAATTGATCCACGAAAGTTGAGTCACGAAGAGAAGATAGCATTCTGGCTTAACGTACATAATGCATTGGTGATGCATGTAAGGTTCCTCATTAATTTAGAGCATCAGTGTTATAGTTTTATAATCGATGCAGTCAATATCTACTTTCAGCTGATGGTGGAGTATTACTATTTCCGTGTAGGCATTTCTAGCTTACGGTATCCCCCAAAACAATGTCAAGAGAATATTTCTACTCTTGAAGGTTAGTAAATAAACCTTTTTATTTGGTTAAGAGTTGCGTGGTGGGGATGTTGTCTTACCTTATTGCTTAATCAGGCTGCCTATAATGTTGGAGGCCATGTAGTAAGTGCAGATATGATACAGAACTCTATCCTGGGATGTCGAATGTCCAGACCAGGACAGGTATACTTCATGAACTATTTCAGTCATGGCCTAAGCTACACAATCAATGAATCAATCAACTAACTACACCTCAAACATACTTTCTCCTCGAAGTATATCCCAAGAGCTTTAGCATCTTTATTTACTTCTGTTGTCAAAATTTCTGTACTGCAGCCTAGTGCTTTTTGTTCTTGGCATATTTCTAGTTCTACTGGTTTTGGAGGATTTAATAGTTGAGATGCTGATAAAGTTCATTCTGGATGCAGTGGCTTCGCTTGTTACTTTCTTCTAAAGGAAAATTCAAGACTGGGGA</genome_strand>
        <mrna_strand>GTCGAGCAGAGCCTCCCCACCGGAAGAGACACTCGGCAAAACATTGCGTGCCTGTCATTCTCAACCGTTATCTATGATGGAG......................................................................................................................................................................TATGCACAAAATGCTTCTTCAAATGTAATCAGTTTGGCAGAGCATCTAGGCACCCGTATCTCTGATCACGTTCCTGATACACCAAACAAGCTGTCCGAGGATATGATAAAGTGCATGTGCACCATATATAGCAAGCTTGCTGATCCTCCACTGACAAATCCCGGTCTTTCATCGCCAACCTCATCCTTGTCTTCCATAAGTGCATTTTCCCCAAAAGACATATGGAGTCCAGGATTTAGGAATGATTCATCTTTTGATGTTCGGCTGGACAATCCTTTTCATGTAGAAGGGTTGAAGGAGTTCAGTGGACCTTACAGCACAATGATTGAAGTACAGTGTGTATATAGAGATACTCAGAAATTGGGCGATATTGAACCGATGTTACAGCACTTCAG.....................................................................................GTCACTTATTTCTCGCCTAGAACAAATTGATCCACGAAAGTTGAGTCACGAAGAGAAGATAGCATTCTGGCTTAACGTACATAATGCATTGGTGATGCAT.......................................................................................................GCATTTCTAGCTTACGGTATCCCCCAAAACAATGTCAAGAGAATATTTCTACTCTTGAAG..........................................................................GCTGCCTATAATGTTGGAGGCCATGTAGTAAGTGCAGATATGATACAGAACTCTATCCTGGGATGTCGAATGTCCAGACCAGGACAG.....................................................................................................................................................................................................................................................TGGCTTCGCTTGGTACTTTCTTCTAAAGGAAAATTCAAGACTGGGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-OMR5jX/lycopersicum_combined_unigene_seqs" ref_id="SGN-U328005" ref_strand="+" ref_description="SGN-U328005">
      <seq>tcttcaccttcccctctattgcacaaagctatattgggaatgtgggagtaacagatttttggagcaaaagtgagcatctgctacttacactttcaactcctggtcaaaaggagggctgccttttcttgtccatttgagactttatgcaaagacaagttgggggttttatttcaagctgaggtttttgaggcctgttttgggtctttaggaccagtgggtctgtttccattttccaaatatttgatctttgatagttacctgtttgaagtatgtactgatatggattttgaagggtttagcaccagtaaatttccagaaaatagagtgacatcatctaaacacacgcgttccaagagcttcccagttaaaccagaacaagaggagaatatcgtggatcattctgtagagacctctaatcgattgaagttggatacgagtcacgggaatgactgtaacgtgagcgagaagaaaccatcatcctcggctgaaatacaaagttctctgaggcaagagataatgcagctggagagaagattacatgatcaagttgcagttcgatgtgctcttgagaaagcattaggttataaatcttcttctcaagatgtcaatgaagtgaccgcaatgcctaagccagcaacagaactgatcagagatattgcagtactagaattggaagttgggcatttggaacagtatcttctctcactatacaggaaagcatttgatcaacaagtctcatccttatctgctcccacaaaagatgatnaactaaaatctcctattagtaccccaaggaggcgtcttgatttctccaatnctgatgtgatattgaaaagggaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-lbVmY/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0066K03.2" temp_strand="-" temp_description="C02SLm0066K03.2  submitted_to_sgn_as:C02Mbo0066K03 len=123077">
        <position start="92462" stop="89164"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="92162" g_stop="91886" g_length="277"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="277" r_length="277" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="91885" i_stop="91788" i_length="98">
            <donor d_prob="0.424" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="91787" g_stop="91709" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="278" r_stop="356" r_length="79" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="91708" i_stop="91214" i_length="495">
            <donor d_prob="0.885" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="91213" g_stop="91141" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="357" r_stop="429" r_length="73" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="91140" i_stop="90867" i_length="274">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="90866" g_stop="90783" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="430" r_stop="513" r_length="84" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="90782" i_stop="90694" i_length="89">
            <donor d_prob="0.952" d_score="1.00"/>
            <acceptor a_prob="0.977" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="90693" g_stop="90577" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="514" r_stop="630" r_length="117" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="90576" i_stop="89677" i_length="900">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="89676" g_stop="89464" g_length="213"/>
          <reference_exon_boundary r_type="cDNA" r_start="631" r_stop="843" r_length="213" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0066K03.2" gen_strand="-" ref_id="SGN-U328005" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>843</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0066K03.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U328005" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="92162" e_stop="91886"/>
          <exon e_start="91787" e_stop="91709"/>
          <exon e_start="91213" e_stop="91141"/>
          <exon e_start="90866" e_stop="90783"/>
          <exon e_start="90693" e_stop="90577"/>
          <exon e_start="89676" e_stop="89464"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTTCACCTTCCCCTCTATTGCACAAAGCTATATTGGGAATGTGGGAGTAACAGATTTTTGGAGCAAAAGTGAGCATCTGCTACTTACACTTTCAACTCCTGGTCAAAAGGAGGGCTGCCTTTTCTTGTCCATTTGAGACTTTATGCAAAGACAAGTTGGGGGTTTTATTTCAAGCTGAGGTTTTTGAGGCCTGTTTTGGGTCTTTAGGACCAGTGGGTCTGTTTCCATTTTCCAAATATTTGATCTTTGATAGTTACCTGTTTGAAGTATGTACTGGTAAGTATACTCTGATCCAGTTTTGCTGTTCCCATTTACGAAAAATTGGTTCTTGATGGCTAATGGCAAGCTTTTCATTCACATTGAGTGAGCTGCAGATATGGATTTTGAAGGGTTTAGCACCAGTAAATTTCCAGAAAATAGAGTGACATCATCTAAACACACGCGTTCCAAGAGGTAGACTTTGGATTTATTCTTGTCTAGAATTCTCTCTCTTTCTCCCTTCATCGCTTTGGGGTCTGCTTAACTAGAAAAAATTGCTTATTGGGTGTATTCCTCGTGGTAGATTTTGTAGTGGTTTTTACGAATAAAACCCCTCTAAATCACATCTGTGCAACTATGTGCTTGCTTGACAAACTGTTGTTTCGTGTACCAATGTGCTCTGCGTTACTGCAAAAATTGGAAAGCTCTGTAGCAAGAGTGGGAAAGGGGAAAAGGGCTTTTTCTTATATGACATGGAGTACTGAATCTAAGCATTCATGCCGTTTACTTCTGTTCTTATATCCTACTACTTCTTCAGTTCCTTTGCACAAAGCAATTTGTTTATTTTAGAAGTCTTTGTGCAATCCAGATTTTAACCCGTGGCTAAATCTTTCCTACATGTGATTTGTTGAGTGCTGTCTTACTGCTTCATTCAATCTTAGTCTTTTTGTGTGATTTCTGCAATGGCAGCTTCCCAGTTAAACCAGAACAAGAGGAGAATATCGTGGATCATTCTGTAGAGACCTCTAATCGATTGAAGTTGGTAAGGACGCTTCGTTCTCGCGTTTTGATGTTAAAAGTAGCCCCCAAGCTATAGTGTCACAATTTCAAATGTTGGAAAAGGAAATAAAAGTAGATCAGAATGGATGATCTTCTACCTAGCTTCCTATATCCCTTTTCCTTCCCTGTAGTCTTGTTTTCTGATATGTCTATGATCCAATTTGCTAGTTCTATCTTCTGAAAAGGTAAAGAAGAACAAAGACCTCAAAGTACTGAGCTTTTGCAACTATTTGAGAATAATATTTTATTTACACTAGGATACGAGTCACGGGAATGACTGTAACGTGAGCGAGAAGAAACCATCATCCTCGGCTGAAATACAAAGTTCTCTGAGGCAAGAGGTAGTCTAACATAGATGATATATCTGCTCATGTTGGTAAATTGGAAAGATTCTTAATGTTTATAGTGGTTTAAGCCATATCCTTTGCAGATAATGCAGCTGGAGAGAAGATTACATGATCAAGTTGCAGTTCGATGTGCTCTTGAGAAAGCATTAGGTTATAAATCTTCTTCTCAAGATGTCAATGAAGTGACCGCAATGCCTAAGGTACCTCCTTCTGCTCTGTGTAGTTTTTTAATGAACTATACTATGTTGTAATCTTTAGCATCCTCTAACGAAGTTTCTCACTTTAGTTGATCTCAAACAAGAACTAAGATATTGTAATGACCCTTCTTGTCATTTTTAGTGTTTTATCTTCTGTGCATCGTTTAGAGCGTTCCTATAGCGATCCCAAGTCATTTATGACTTGCTGGGACTAACAGATCGGTCACCTGGTCGTTCGTTTGGTTATTGTGTGAGCTTTAGTATTTTTGAAGTCAAACTTAGCCTTTAACTTAAAGTTAAAACACCTAATCACACCAACTCACATTGAAAACTTCGGGAGTCATGTCAACAATGCTACTAGCCTAAAATGACCCTTCTGGAACTGATGGAATCGTCAGAATTGGATTCTGATGTCATCTTCTTGAACTTTTGATCGAAAATGATCGTTCAAGGTTCATAAGCTCCAAAAATACTAAAGCTCACACAATAACCAAACTAACGACCAGGTGACCGATCTGTCAGTCCCAGCAAGTCATAAATGACTTGGGATCGCTATAGGAACGCTCTAAACGATGCACAGAAGATAAAACACTAAAAATGACAAGAAGAGTCATTACATATATGCTATATATATGAGATACTTTTGAAGAGGTTGATTTTAGATATGTGATAATGCAAATATGTTAGCTTTACATATGCTCTCTGAGTTTGTGTAAACTTGGGAACTTCACACATTAATTTCTTTGTGAAGCTGATTTAGTAGTGTAAGCCTCAAATAGTCTATTTTTAGTTCCGAGTTTCTGCTAGGCTCATTGTTGTTGTTGGGTTATTTCCTTATATCTTAATTGATTGTTAACTGTATTTCTGTCTTATGTTGATTGTACTCTTCTCAACTATTTCCAGCCAGCAACAGAACTGATCAGAGATATTGCAGTACTAGAATTGGAAGTTGGGCATTTGGAACAGTATCTTCTCTCACTATACAGGAAAGCATTTGATCAACAAGTCTCATCCTTATCTCCTCCCACAAAAGATGATAAACTAAAATCTCCTATAAGTACCCCAAGGAGGCGTCTTGATTTCTCCAATTCTGATGTGATATTGAAAAGGGAAAAA</genome_strand>
        <mrna_strand>TCTTCACCTTCCCCTCTATTGCACAAAGCTATATTGGGAATGTGGGAGTAACAGATTTTTGGAGCAAAAGTGAGCATCTGCTACTTACACTTTCAACTCCTGGTCAAAAGGAGGGCTGCCTTTTCTTGTCCATTTGAGACTTTATGCAAAGACAAGTTGGGGGTTTTATTTCAAGCTGAGGTTTTTGAGGCCTGTTTTGGGTCTTTAGGACCAGTGGGTCTGTTTCCATTTTCCAAATATTTGATCTTTGATAGTTACCTGTTTGAAGTATGTACTG..................................................................................................ATATGGATTTTGAAGGGTTTAGCACCAGTAAATTTCCAGAAAATAGAGTGACATCATCTAAACACACGCGTTCCAAGAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCCCAGTTAAACCAGAACAAGAGGAGAATATCGTGGATCATTCTGTAGAGACCTCTAATCGATTGAAGTTG..................................................................................................................................................................................................................................................................................GATACGAGTCACGGGAATGACTGTAACGTGAGCGAGAAGAAACCATCATCCTCGGCTGAAATACAAAGTTCTCTGAGGCAAGAG.........................................................................................ATAATGCAGCTGGAGAGAAGATTACATGATCAAGTTGCAGTTCGATGTGCTCTTGAGAAAGCATTAGGTTATAAATCTTCTTCTCAAGATGTCAATGAAGTGACCGCAATGCCTAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAGCAACAGAACTGATCAGAGATATTGCAGTACTAGAATTGGAAGTTGGGCATTTGGAACAGTATCTTCTCTCACTATACAGGAAAGCATTTGATCAACAAGTCTCATCCTTATCTGCTCCCACAAAAGATGATNAACTAAAATCTCCTATTAGTACCCCAAGGAGGCGTCTTGATTTCTCCAATNCTGATGTGATATTGAAAAGGGAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-OMR5jX/lycopersicum_combined_unigene_seqs" ref_id="SGN-U332301" ref_strand="+" ref_description="SGN-U332301">
      <seq>catggagtcttggattcagcactgtcagaatgccgacagtgctgagtcaattgaaatgctgaaggagagttcccaattggggtgtgcttgtccaaattcagcatgctcttctcaaacttgtgatcatatttacctctttgataatgattacgatgatgccaaagatatttatgggaagcctatgcgtggaaggttcccatatgatgagagaggtcggatcatgttggaggagggctaccttatctatgaatgcaatcaatggtgctcgtgcagtaaatcttgtcagaatagggttttacagagtggagtgcgtgtgaagctagaaatatacaaaaccgagacaaggggatgggcagtcacggcaagagaagcaatccttcgtggtacatttgtgtgtgaatatgtaggagaggtacttgatgagcaggaagcaaataagagacgcaatatgtctgccacagaaggttgtgggtacttcttggagatagatgctcacatcaatgatatgagcagactgattgaagggcagtctccatatgtaattgatgctactaactatggaaacatttcccagtatatcaaccacagttgctcaccaaatctcgtgaattaccaagttctcgtggacagcatggatcatcatcttgcacatgttggtttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-lbVmY/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0066K03.2" temp_strand="+" temp_description="C02SLm0066K03.2  submitted_to_sgn_as:C02Mbo0066K03 len=123077">
        <position start="107697" stop="114135"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="107996" g_stop="108062" g_length="67"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="67" r_length="67" r_score="0.985"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108063" i_stop="111596" i_length="3534">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.784" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="111597" g_stop="111758" g_length="162"/>
          <reference_exon_boundary r_type="cDNA" r_start="68" r_stop="229" r_length="162" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="111759" i_stop="112038" i_length="280">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.947" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="112039" g_stop="112155" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="230" r_stop="346" r_length="117" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="112156" i_stop="112221" i_length="66">
            <donor d_prob="0.874" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="112222" g_stop="112325" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="347" r_stop="450" r_length="104" r_score="0.981"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="112326" i_stop="112420" i_length="95">
            <donor d_prob="0.879" d_score="0.98"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="112421" g_stop="112558" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="451" r_stop="588" r_length="138" r_score="0.986"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="112559" i_stop="113762" i_length="1204">
            <donor d_prob="1.000" d_score="0.96"/>
            <acceptor a_prob="0.816" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="113763" g_stop="113835" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="589" r_stop="661" r_length="73" r_score="0.973"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0066K03.2" gen_strand="+" ref_id="SGN-U332301" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>661</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0066K03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U332301" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="107996" e_stop="108062"/>
          <exon e_start="111597" e_stop="111758"/>
          <exon e_start="112039" e_stop="112155"/>
          <exon e_start="112222" e_stop="112325"/>
          <exon e_start="112421" e_stop="112558"/>
          <exon e_start="113763" e_stop="113835"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATGGAGTCTTGGATTCAGCACTGTCAGAATGCCGACAGTGCTGAGTCAATTGAAATGCTGAAGGAGGTAAATCCCTAAATGATGCTCATATATGCATCCATTCTGCTGTATATCTATGGTTGTAAATTTTTTATTGTTTGTTTTGCTTTTCTTTTGTTGTCTTTTTCTTGAGTGAAATTTATTACTTCTAATAATAATTATGAGTAATTTATTATAATAAATGTGTACTTGACTTCTTATGATTGAGTTTCTGTTTCCACACAACTGGAACTTTGGAGTTTTACTGCACCACCAAGGCAGTTATATGGATGGGTGTTACTCTTTTAAGAGTTGATTGCTGCCATTGAAAGTGAAGTTTTGCAAGGACTAGAGTATGATTGTTGTTGATGCATAAGAACATGTTTCATTGTCAAGAAGCAGAATCCAACTTCCTGTTGGCACTTTGGGATGTGGGAAGGACGTGTGTGTTAGTCCTTGATTATGTCTGCAGTTGCTTCACTGATGACACTTGCTACCTTCTCAATAGCATTTTACCTTATCAGTGGAAAACCCATTTGATTGAATAGATGCTGAACTGGTCTTTTGAAATTTCATCATAGTACTATCTTGGCGCAGACTAAAGCTTTTATCTTTCTATTCAGGAATTGGCTGATTCTGTACGTTGGGATGAGTTGAACTCACTTCCAAATGAAGGATTACATCTTGATCTGAACTCTCAGTGGAAGAATTGCAAATCTGAGGTTATGAAATGGTTTTCAGTTTCACATCCCGTATCTGATAGTGGAGATGTTGAACAGCCGAATAATGATAGCCCATTGAAAATGGAGCTTCAGCAGAGCAGAAAGAGGCCCAAGCTTGAAGTTCGTCGTGCTGAGGCACATGCTTTGCCAGTGGAATTTCAGGTGTCACATCAGGCTGTCCCTGTTGGATTTGATGCTGGTGGTCTTGGTGGCCATGATATCTCCAAAAATGTACTTTTAGAATCTGAACCAACAAAAGATGACATTTCTCTTGGAGAGGCTCCTCGAAATGGTTCTCCTGGTAGTGTGGCAGATAGATGGGGAGAGATTATTGTTCAAGCAGACAATTCCGACGTCATTCAGATGAAAGATGTGGAACTGACCCCTATAAATGGAGTTTCAAGTAATTCCTTTGATCATGGAAGTAAGAATCGCCAGTGTATGGCCTTTATTGAATCTAAAGGAAGACAATGTGTCAGATGGGCAAATGACGGTGATGTTTATTGTTGTGTGCACTTGGCCTCTCGCTTTGCCAGTACCTCAATTAAGGTGGATGCATCTCCACATGTTGATACACCTATGTGTGGAGGGACCACTGTTCTTGGGACTAAATGTAAACATCGCGCCTTATGCGGCTCTCCTTTCTGTAAGAAACACAGGCCCCGAGATGAGAATGGATTGGGTTCTATTTTGCCCGAGAGTAAACATAAACGCAAGCATGAGGACAATGTCCTTGGATTGGATACCTCAAATTGCAAAGATATTGTTCTCGCTGGAGCATTTGATGCTCCGCTCCAAGTTGATCCTATCTCAGTTCTTCGTGGAGAATCTTGCTATAGGAACAACTTGCTTGAGGTGCCTCAGTATTTGCAGAACAGACCAAGTGGTTCTGAGATGCATTGCATTGGTTTGTGGCCACATGGAAGTGAGCTTTGCATAGAAAGTCCAAAACGACATTCATTATACTGTGAGAAGCATTTACCAAGCTGGCTTAAACGTGCGAGGAATGGCAAGAGTAGGATTATTTCAAAGGAAGTATTCATAGAACTTTTGAAGGATTGCCAGTCCAGGGATCAAAGATTGTATTTACATCAAGCTTGTGAGCTTTTCTATAGACTTCTCAAAAGTTTACTTTCTTTGAGAAACCCAGTTCCAAAAGAAGTGCAATTCCAGTGGGTCATATCTGAAGCTTCTAAAGATCCAATGGTTGGTGAATTCTTAATGAAATTAGTTTGTACTGAAAAACAGAGGCTGAAAAGTGTTTGGGGATTTAGCGCTAGTGAAAATGCACAAGCTTCCTCTTACGTCAAAGAACCAATTCCATTATTAAGGATTACGGATAATGACCAGGATCATTGTGATGTCATAAAGTGCAAAATTTGCTCTGAGACGTTTCCAGATGAGCAAGTGCTTGGCACACACTGGATGGACAGCCACAAAAAGGAAGCCCAATGGCTTTTCAGGGGTTATGCTTGTGCTATCTGTCTGGATTCTTTTACTAATAAGAAAGTTTTGGAAACTCATGTGCAGGAAAGGCACCATTCACAGTTTGTTGAAAATTGCATGCTTTTTCAGTGTATTCCGTGTACTAGCAATTTTGGGAACTCAGAGGAGTTATGGTCCCACGTGCTCACCGCACATCCTTCCAGTTTTAGATGGTCTCATACTGCTCAAGAGAATCATTTTCCTGCAAGTGAGGTTGCATCAGAGAAGCCTGATATAGGCAACTCCTTGTCGACACAGAATTTCAATTCAGAGAACCAGTCTGGTTTCCGAAAATTCATCTGCAGATTTTGTGGCCTGAAATTTGACTTGCTACCTGATCTAGGCCGCCATCATCAGGCTGCTCACATGGGTCCTAATCCTGTTGGCTCTCATATCTCCAAGAAGGGCATCCGTTTATATGCTCATAAATTGAAGTCAGGAAGACTTAGCCGTCCAAAATTCAAGAAGGGTCTCGGATCTGTAGCATATAGGATTAGGAACAGAAATGCTCAGAATATGAAGAGACGCATCCTGTCATCGAACTCCATTATTAGTGGAAAACCTTCGATTCAACCTAGTGCAACCGAGGCAGCTGGTCTAGGTAGACTGGGAGATCCCCACTGCTTAGATATTGCAAAGATATTGTTTGCTGAGATTAAGAGAACAAAGCCACGGCCAAGTAACTCAGACATCTTATCAATAGCTCGGATTACTTGCTGCAAAGTAAGCCTCCAAGCATCACTTGAAGCAACATATGGAATTTTGCCAGAGCGCATGTATCTCAAAGCAGCAAAATTATGCAGTGAGCACAACATCCTTGTCAGCTGGCACCAAGATGGTTTCATTTGCCCCAAAGGATGTAGACCTGTTCATGACCCTTTCATAGTATCTTCATTACTTCCCCTTCCTGGTCAAGTGAATAGAACTGGAAGTATTCCACCGAATTCTGCTATTAGTGAGTGGACTATGGATGAGTGCCACTATGTCATAGATTCTCAACAGTTCAAGCACGAACCATCTGACAAAACTATTCTCTTGTGTGATGACATAAGCTTTGGACAGGAGTCAGTTCCGATAACTTGTGTGGTAGAAGAAAATCTTTTTGCCTCCCTCCACATTCTTGCTGATGGCTCCAATGGCCAAATTACCACAAGTTCTCTACCTTGGGAGAGCTTTACCTACGCAACAAAACCATTGATTGATCAATCCTTGGATCTTGCAATAGGGGTAACTTGTTTTGACTTCTAGTATTCCATGCAACTTCCATTTCATCTGGCGAAGCACCGGAACAAATGGTTTTCATAACCTCGAGTTGTTAATTTCCCTCAGTCACTGTCTCTTCTCCTCTCTAATCATCTTTTCCCTTTTATGGCAGAGTTCCCAATTGGGGTGTGCTTGTCCAAATTCAGCATGCTCTTCTCAAACTTGTGATCATATTTACCTCTTTGATAATGATTACGATGATGCCAAAGATATTTATGGGAAGCCTATGCGTGGAAGGTTCCCATATGATGAGAGAGGTCGGATCATGTTGGAGGTAAAAATATATTCCTTTGATTTTTCTTTCCTAATTTTGTGATTTGCAGTCCGTATTTTTTTTGGCTGATAATTAAAAAGATAAGGATGCCTTGTGTACTCTTGTCATTAAAAAGATAAGGATGCCCTGTGTATATCTTCTGCTCAATAATATGGATTTGTCTTATAACTGTGTTGGCTGAAGAGCATTACAGTATGATAATCATACATGATGCTAGAAATTTGTAGGGTGTGCTCGATTTTATAAGCATTTTGCGCCTGATTATCTACTTGATTTTCAGGAGGGCTACCTTATCTATGAATGCAATCAATGGTGCTCGTGCAGTAAATCTTGTCAGAATAGGGTTTTACAGAGTGGAGTGCGTGTGAAGCTAGAAATATACAAAACCGAGACAAGGGTAACACTTTGATCTGAAATTATGAAGGCGTGAGTTTCTCTAGTTATTTACTATTTTGTCTTACAGGGATGGGCAGTCAGGGCAAGAGAAGCAATCCTTCGTGGTACATTTGTGTGTGAATATGTAGGAGAGGTACTTGATGAGCAGGAAGCAAATAAGAGACGCAATAGGTTGTAAGCTTATAACACATTCTACTTGGTAGCTAAAATTTCTTTGTTGTATGTCATTGTACCTTATTTATATCTGGATCCACCTATTTGAGTAGGTCTGCCACAGAAGGTTGTGGGTACTTCTTGGAGATAGATGCTCACATCAATGATATGAGCAGACTGATTGAAGGGCAGTCTCCATATGTAATTGATGCTACTAACTATGGAAACATTTCCCGTTATATCAACCACAGGTACTGTTACAGCTCTCTTCTTGATTTGCTTTAATCTCAATGTGGTTATAATTGCCTTAATTTGCATTATATTGGGACCATCAGCTCCAATAGAAGTGTATAAGTAAAGGCAATGTGGAAATATCACGTCTCAAAGTTCCTTTATAAATGCCAAACGATGCTTATAATGGTCAGTTCATTAACTGAAGATTGACAAACCAACAAATCTATTATTACAATGCCAGCTTGAAATTCCTGTACTAGCCAAAAATTCAATTGAGTTCTACTCCAACTTGCTATAAAGATAAACGGTCTTCTTTTATGTAAAAATCACTGTTAAGCAGTCTGCAAGAATACCATCTTTTTGCTCCACCCGTGCATGGCACTCCTTGCCCACGGAGCAGCATACTGAAAAAAATTCACAATCAGGATACAACAACTGATTTACTATCTTTTTCTGTTCTTTTTTTTTTAACTTGCACTCTAGTGATCGATTTGCTTAACTCAGCTGCATACAAAGCATAATTCATGTTTTCAATTCCGCCAACTTGTTCTCACTTCTGCCATTCCGTGCTTCTACCTAACCTACCTGTGTGTTGCTGAGAGATTCAAATAGATACAACTATTTGGGATTACATTGGGTACACTGTTGTTGTATAACTGTGTGAAAGTTTGTCCTATGTCTGACATCTTTTATTTTTTGATGATTGTGTAGAGTTTCTGCATATGATTTACACCTTGGTTTCTTATGAAGTAGTTTCCCATAAACACTGCACCGCGTTTTTGCCAAGCAAGATAGCTTTTTGGTGGGACCCTTCTTATAGAATGTAGAACAATTATACTGGTGTAGTACGGATTGCATTAGGACATAATGAGTACTACAACCATGCTGCCTACATGAAAATCTTAATAGATGAAATGTTCCTACTTAGAATGTATATGAAATTAGGATGGCTTCCAATGGCCTGTAGATTGCTGCTTGTCAATGGAATGATCCTTAAATGTCTTATTTGTAACTCGAGGAGTTTTAAGTTCTCTTCTGCTGTAAAAGTAGCATACCCACAAACACAGAAAAGAAAAAAAAAACAATATTGATAAGTGAAACAGTAGCTGTTTTTTTTTTTATTTCCTGCTGCTGATCATGAGTTGATGTGTAATATTATTTCAGATTGCTTTCAGTTAAGTTCTTACGAGAATGTTTTGGTTCCTTTTTTGTTGCAATTAGTTGCTCACCAAATCTCGTGAATTACCAAGTTCTCGTGGAAAGCATGGATCATCAGCTTGCACATGTTGGTTTT</genome_strand>
        <mrna_strand>CATGGAGTCTTGGATTCAGCACTGTCAGAATGCCGACAGTGCTGAGTCAATTGAAATGCTGAAGGAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTCCCAATTGGGGTGTGCTTGTCCAAATTCAGCATGCTCTTCTCAAACTTGTGATCATATTTACCTCTTTGATAATGATTACGATGATGCCAAAGATATTTATGGGAAGCCTATGCGTGGAAGGTTCCCATATGATGAGAGAGGTCGGATCATGTTGGAG........................................................................................................................................................................................................................................................................................GAGGGCTACCTTATCTATGAATGCAATCAATGGTGCTCGTGCAGTAAATCTTGTCAGAATAGGGTTTTACAGAGTGGAGTGCGTGTGAAGCTAGAAATATACAAAACCGAGACAAGG..................................................................GGATGGGCAGTCACGGCAAGAGAAGCAATCCTTCGTGGTACATTTGTGTGTGAATATGTAGGAGAGGTACTTGATGAGCAGGAAGCAAATAAGAGACGCAATAT...............................................................................................GTCTGCCACAGAAGGTTGTGGGTACTTCTTGGAGATAGATGCTCACATCAATGATATGAGCAGACTGATTGAAGGGCAGTCTCCATATGTAATTGATGCTACTAACTATGGAAACATTTCCCAGTATATCAACCACAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCTCACCAAATCTCGTGAATTACCAAGTTCTCGTGGACAGCATGGATCATCATCTTGCACATGTTGGTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-OMR5jX/lycopersicum_combined_unigene_seqs" ref_id="SGN-U330053" ref_strand="+" ref_description="SGN-U330053">
      <seq>aacatcgcgccttatgcggctctcctttctgtaagaaacacaggccccgagatgagaatggattgggttctattttgcccgagagtaaacataaacgcaagcatgaggacaatgtccttggattggatacctcaaattgcaaagatattgttctcgctggagcatttgatgctccgctccaagttgatcctatctcagttcttcgtggagaatcttgctataggaacaacttgcttgaggtgcctcagtatttgcagaacagaccaagtggttctgagatgcattgcattggtttgtggccacatggaagtgagctttgcatagaaagtccaaaacgacattcattatactgtgagaagcatttaccaagctggcttaaacgtgcgaggaatggcaagagtaggattatttcaaaggaagtattcatagaacttttgaaggattgccagtccagggatcaaagattgtatttacatcaagcttgtgagcttttctatagacttctcaaaagtttactttctttgagaaacccagttccaaaagaagtgcaattccagtgggtcatatctgaagcttctaaagatccaatggttggtgaattcttaatgaaattagtttgtactgaaaaagagaggctgaaaagtgtttggggatttagcgctagtgaaaatgcacaagcttcctcttacgtcgaagaaccaattccattattaaggattacggaaaatgaccaggatcattgtgatgtcataaagtgcaaaatttgctctgagacgtttccagatgagcaagtgcttggcacacactggatggacagccacaaaaaggaagctcaatggctgttcaggggttatgcttgtgctatctgccttgattcttttactaataagaaagttttggaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-lbVmY/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0066K03.2" temp_strand="+" temp_description="C02SLm0066K03.2  submitted_to_sgn_as:C02Mbo0066K03 len=123077">
        <position start="109053" stop="110555"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="109353" g_stop="110255" g_length="903"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="903" r_length="903" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0066K03.2" gen_strand="+" ref_id="SGN-U330053" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>903</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0066K03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U330053" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="109353" e_stop="110255"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACATCGCGCCTTATGCGGCTCTCCTTTCTGTAAGAAACACAGGCCCCGAGATGAGAATGGATTGGGTTCTATTTTGCCCGAGAGTAAACATAAACGCAAGCATGAGGACAATGTCCTTGGATTGGATACCTCAAATTGCAAAGATATTGTTCTCGCTGGAGCATTTGATGCTCCGCTCCAAGTTGATCCTATCTCAGTTCTTCGTGGAGAATCTTGCTATAGGAACAACTTGCTTGAGGTGCCTCAGTATTTGCAGAACAGACCAAGTGGTTCTGAGATGCATTGCATTGGTTTGTGGCCACATGGAAGTGAGCTTTGCATAGAAAGTCCAAAACGACATTCATTATACTGTGAGAAGCATTTACCAAGCTGGCTTAAACGTGCGAGGAATGGCAAGAGTAGGATTATTTCAAAGGAAGTATTCATAGAACTTTTGAAGGATTGCCAGTCCAGGGATCAAAGATTGTATTTACATCAAGCTTGTGAGCTTTTCTATAGACTTCTCAAAAGTTTACTTTCTTTGAGAAACCCAGTTCCAAAAGAAGTGCAATTCCAGTGGGTCATATCTGAAGCTTCTAAAGATCCAATGGTTGGTGAATTCTTAATGAAATTAGTTTGTACTGAAAAACAGAGGCTGAAAAGTGTTTGGGGATTTAGCGCTAGTGAAAATGCACAAGCTTCCTCTTACGTCAAAGAACCAATTCCATTATTAAGGATTACGGATAATGACCAGGATCATTGTGATGTCATAAAGTGCAAAATTTGCTCTGAGACGTTTCCAGATGAGCAAGTGCTTGGCACACACTGGATGGACAGCCACAAAAAGGAAGCCCAATGGCTTTTCAGGGGTTATGCTTGTGCTATCTGTCTGGATTCTTTTACTAATAAGAAAGTTTTGGAAA</genome_strand>
        <mrna_strand>AACATCGCGCCTTATGCGGCTCTCCTTTCTGTAAGAAACACAGGCCCCGAGATGAGAATGGATTGGGTTCTATTTTGCCCGAGAGTAAACATAAACGCAAGCATGAGGACAATGTCCTTGGATTGGATACCTCAAATTGCAAAGATATTGTTCTCGCTGGAGCATTTGATGCTCCGCTCCAAGTTGATCCTATCTCAGTTCTTCGTGGAGAATCTTGCTATAGGAACAACTTGCTTGAGGTGCCTCAGTATTTGCAGAACAGACCAAGTGGTTCTGAGATGCATTGCATTGGTTTGTGGCCACATGGAAGTGAGCTTTGCATAGAAAGTCCAAAACGACATTCATTATACTGTGAGAAGCATTTACCAAGCTGGCTTAAACGTGCGAGGAATGGCAAGAGTAGGATTATTTCAAAGGAAGTATTCATAGAACTTTTGAAGGATTGCCAGTCCAGGGATCAAAGATTGTATTTACATCAAGCTTGTGAGCTTTTCTATAGACTTCTCAAAAGTTTACTTTCTTTGAGAAACCCAGTTCCAAAAGAAGTGCAATTCCAGTGGGTCATATCTGAAGCTTCTAAAGATCCAATGGTTGGTGAATTCTTAATGAAATTAGTTTGTACTGAAAAAGAGAGGCTGAAAAGTGTTTGGGGATTTAGCGCTAGTGAAAATGCACAAGCTTCCTCTTACGTCGAAGAACCAATTCCATTATTAAGGATTACGGAAAATGACCAGGATCATTGTGATGTCATAAAGTGCAAAATTTGCTCTGAGACGTTTCCAGATGAGCAAGTGCTTGGCACACACTGGATGGACAGCCACAAAAAGGAAGCTCAATGGCTGTTCAGGGGTTATGCTTGTGCTATCTGCCTTGATTCTTTTACTAATAAGAAAGTTTTGGAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-OMR5jX/lycopersicum_combined_unigene_seqs" ref_id="SGN-U330952" ref_strand="+" ref_description="SGN-U330952">
      <seq>gcacacactggatggacagccacaaaaaggaagcccaatggcttttcaggggttatgcttgtgctatctgtctggattcttttactaataagaaagttttggaaactcatgtgcaggaaaggcaccattcacagtttgttgaaaattgcatgctttttcagtgtattccgtgtactagcaattttgggaactcagaggagttatggtcccacgtgctcaccgcacatccttccagttttagatggtctcatactgctcaagagaatcattttcctgcaagtgaggttgcatcagagaagcctgatataggcaactccttgtcgacacagaatttcaattcagagaaccagtctggtttccgaaaattcatctgcagattttgtggcctgaaatttgacttgctacctgatctaggccgccatcatcaggctgctcacatgggtcctaatcctgttggctctcatatctccaagaagggcatccgtttatatgctcataaattgaagtcaggaagacttagccgtccaaaattcaagaagggtctcggatctgtagcatataggattaggaacagaaatgctcagaatatgaagagacgcatcctgtcatcgaactccattattagtggaaaaccttcgattcaacctagtgcaaccgaggcagctggtctaggtagactgggagatccccactgcttagatattgcaaagatattgtttgctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-lbVmY/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0066K03.2" temp_strand="+" temp_description="C02SLm0066K03.2  submitted_to_sgn_as:C02Mbo0066K03 len=123077">
        <position start="109851" stop="111173"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="110151" g_stop="110873" g_length="723"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="723" r_length="723" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0066K03.2" gen_strand="+" ref_id="SGN-U330952" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>723</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0066K03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U330952" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="110151" e_stop="110873"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCACACACTGGATGGACAGCCACAAAAAGGAAGCCCAATGGCTTTTCAGGGGTTATGCTTGTGCTATCTGTCTGGATTCTTTTACTAATAAGAAAGTTTTGGAAACTCATGTGCAGGAAAGGCACCATTCACAGTTTGTTGAAAATTGCATGCTTTTTCAGTGTATTCCGTGTACTAGCAATTTTGGGAACTCAGAGGAGTTATGGTCCCACGTGCTCACCGCACATCCTTCCAGTTTTAGATGGTCTCATACTGCTCAAGAGAATCATTTTCCTGCAAGTGAGGTTGCATCAGAGAAGCCTGATATAGGCAACTCCTTGTCGACACAGAATTTCAATTCAGAGAACCAGTCTGGTTTCCGAAAATTCATCTGCAGATTTTGTGGCCTGAAATTTGACTTGCTACCTGATCTAGGCCGCCATCATCAGGCTGCTCACATGGGTCCTAATCCTGTTGGCTCTCATATCTCCAAGAAGGGCATCCGTTTATATGCTCATAAATTGAAGTCAGGAAGACTTAGCCGTCCAAAATTCAAGAAGGGTCTCGGATCTGTAGCATATAGGATTAGGAACAGAAATGCTCAGAATATGAAGAGACGCATCCTGTCATCGAACTCCATTATTAGTGGAAAACCTTCGATTCAACCTAGTGCAACCGAGGCAGCTGGTCTAGGTAGACTGGGAGATCCCCACTGCTTAGATATTGCAAAGATATTGTTTGCTG</genome_strand>
        <mrna_strand>GCACACACTGGATGGACAGCCACAAAAAGGAAGCCCAATGGCTTTTCAGGGGTTATGCTTGTGCTATCTGTCTGGATTCTTTTACTAATAAGAAAGTTTTGGAAACTCATGTGCAGGAAAGGCACCATTCACAGTTTGTTGAAAATTGCATGCTTTTTCAGTGTATTCCGTGTACTAGCAATTTTGGGAACTCAGAGGAGTTATGGTCCCACGTGCTCACCGCACATCCTTCCAGTTTTAGATGGTCTCATACTGCTCAAGAGAATCATTTTCCTGCAAGTGAGGTTGCATCAGAGAAGCCTGATATAGGCAACTCCTTGTCGACACAGAATTTCAATTCAGAGAACCAGTCTGGTTTCCGAAAATTCATCTGCAGATTTTGTGGCCTGAAATTTGACTTGCTACCTGATCTAGGCCGCCATCATCAGGCTGCTCACATGGGTCCTAATCCTGTTGGCTCTCATATCTCCAAGAAGGGCATCCGTTTATATGCTCATAAATTGAAGTCAGGAAGACTTAGCCGTCCAAAATTCAAGAAGGGTCTCGGATCTGTAGCATATAGGATTAGGAACAGAAATGCTCAGAATATGAAGAGACGCATCCTGTCATCGAACTCCATTATTAGTGGAAAACCTTCGATTCAACCTAGTGCAACCGAGGCAGCTGGTCTAGGTAGACTGGGAGATCCCCACTGCTTAGATATTGCAAAGATATTGTTTGCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-OMR5jX/lycopersicum_combined_unigene_seqs" ref_id="SGN-U340877" ref_strand="+" ref_description="SGN-U340877">
      <seq>acctagtggatcccccgggctgcaggaattcggcacgaggcaaaatctatgtgcccctctaatattaaaacagccttcatcggggtaaaatatatgggaatgggacttcgtttaagaatctgatcatatatatattcccggacatacaatttttaattaagagattttgaatttaaattttattttattttatttttttccgtattacattatttttactagggagcatggaaattttgcggcgcgaattctaaatgaaaaacaaaagaaacaaatagagaagacctaactatgagtatgatctgtttacccaatttaaaaatctcgaggctctttatatttcattttatttttaggacaaatatatgttgttgttctaattgaatatattcgataaataaagtaaacataaaggaattagagaaaaatttgataattgaagtagtgaaaaatgtaaattatggagtaatacctgttaacagaaaaattaacaggaaagctggagtttttttctattcttaaactttttttgggaaaaaaganggtatgcccnaggagtacataaagagctatattcttatttgttttcatcaattgaatgggtgcttgatgatgtgttgaagtggaantgggtggtaataggaggggtcacattgtaccaataatatgggtggagatggtgtgtcattgtcaaagatataatataatgatggagattgggtatggtggaacgcagtattnttgccnggttaggattggcgggggaaactggtggtttgtgatggggaaccaaaaattgtgggaaggcatgtgtgatgggaagtgttgaatagaatggtcacggaaatgggtgaagaccaggattggagtgggagggcctatttagatggaaataggtgtgcgagtacttggtgccgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-lbVmY/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0066K03.2" temp_strand="-" temp_description="C02SLm0066K03.2  submitted_to_sgn_as:C02Mbo0066K03 len=123077">
        <position start="117145" stop="115762"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="116844" g_stop="116016" g_length="829"/>
          <reference_exon_boundary r_type="cDNA" r_start="42" r_stop="838" r_length="797" r_score="0.928"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0066K03.2" gen_strand="-" ref_id="SGN-U340877" ref_strand="+">
        <total_alignment_score>0.928</total_alignment_score>
        <cumulative_length_of_scored_exons>829</cumulative_length_of_scored_exons>
        <coverage percentage="0.903" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0066K03.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U340877" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="116844" e_stop="116016"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAATCTATGTGCCCCTCTAATATTAAAACAGCCTTCATCGTTGTAAAATATATGGGAATGGGACTTCGTTTAAGAATCTGATCATATATATATTCCCGGACATACAATTTTTAATTAAGAGATTTTGAATTTAAATTTTATTTTATTTTATTTTTTTCCGTATTACATTATTTTTACTAGGGAGCATGGAAATTTTGCGGCGCGAATTCTAAATGAAAAACAAAAGAAACAAATAGAGAAGACCTAACTATGAGTATGATCTGTTTACCCAATTTAAAAATCTCGAGGCTCTTTATATTTCATTTTATTTTTAGGACAAATATATGTTGTTGTTCTAATTGAATATATTCGATAAATAAAGTAAACATAAAGGAATTAGAGAAAAATTTGATAATTGAAGTAGTGAAAAATGTAAATTATGGAGTAATACCTGTTAACAGAAAAATTAACAGGAAAGCTGGAGTTTTTTTCTATTCTTAAACTTTTTTTGGAAAAAAGTAGGTTATGCCCAAGGAGTACATAAAGAGCTATATTCTTATTTGTTTTCATCAATTGAATGGGTGCTTGATGATGTGTTGGAAGTGGAAATGGTTGGTAATAGGAGTTGGTCACATTGTACCAATAATAATGGTGGAGATGGTGATGTCAATGTCAAAGGATATAATTATAATGATGGAGTAGTGGATATGGTTGTGATCGACAGTAGTAGTTGACAGTGATAGTGATTGTCAGTGGTGAAACTGGTTGGTATTGTTGATGGTGGTAACCAAAAAATTGTGTGGTGATTGACAATGTGTTGATGGTAAAGGTTGTTTGTAATAGGAATTG</genome_strand>
        <mrna_strand>AAAATCTATGTGCCCCTCTAATATTAAAACAGCCTTCATCGGGGTAAAATATATGGGAATGGGACTTCGTTTAAGAATCTGATCATATATATATTCCCGGACATACAATTTTTAATTAAGAGATTTTGAATTTAAATTTTATTTTATTTTATTTTTTTCCGTATTACATTATTTTTACTAGGGAGCATGGAAATTTTGCGGCGCGAATTCTAAATGAAAAACAAAAGAAACAAATAGAGAAGACCTAACTATGAGTATGATCTGTTTACCCAATTTAAAAATCTCGAGGCTCTTTATATTTCATTTTATTTTTAGGACAAATATATGTTGTTGTTCTAATTGAATATATTCGATAAATAAAGTAAACATAAAGGAATTAGAGAAAAATTTGATAATTGAAGTAGTGAAAAATGTAAATTATGGAGTAATACCTGTTAACAGAAAAATTAACAGGAAAGCTGGAGTTTTTTTCTATTCTTAAACTTTTTTTGGGAAAAAAGANGGTATGCCCNAGGAGTACATAAAGAGCTATATTCTTATTTGTTTTCATCAATTGAATGGGTGCTTGATGATGTGTT-GAAGTGGAANTGGGTGGTAATAGGAG-GGGTCACATTGTACCAATAATATGGGTGGAGATGGTG-TGTCATTGTCAAA-GATATAA-TATAATGATGGAG-ATTGGGTATGG-TG-GAACG-CAGTA-TTNTTGCCNG-GTTAG-GATTGGC-G-GGGGAAACTGG-TGGT-TTG-TGATGG-GG-AACC-AAAAA-T-TGTGG-GA-AGGC-ATGTG-TGATGG-GAA-G-TG-TTG-AATA-GAATGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-OMR5jX/lycopersicum_combined_unigene_seqs" ref_id="SGN-U332095" ref_strand="+" ref_description="SGN-U332095">
      <seq>aatttttcaattcatataggaggggagctcatcattccactctgttaaatctctgatttggtggttcccttcatgcttgacatcaaagctttcattcaatcattttcaatgcctcttccttggacttttaaattaaaagatttggggttttcaagaaaatctcagatagctctctctgtttgtagttgagtatttgttgttttctctatttcaagaatttgggtgtttcaagaatcccttttgtcctgccattttacacctttaggagtggtgagtttcaactcttctttctttgtttcttgacaactatactgttaaaggtttgatcttttgttttgtttgctgtccttttggagaacgaaagaaaggaacaatttgtgttttttttattgttaagtgttggagtagtagctatcttttatcagaggggaaaagattagctctttgatgttttgtcctaattagtagatattcattcttatgatcaaagagttccttagttctgtgtagtcaacctgatttcaatttcatcatcccttaagtaaaaaaaatgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-lbVmY/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0066K03.2" temp_strand="+" temp_description="C02SLm0066K03.2  submitted_to_sgn_as:C02Mbo0066K03 len=123077">
        <position start="118481" stop="119634"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="118781" g_stop="119334" g_length="554"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="554" r_length="554" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0066K03.2" gen_strand="+" ref_id="SGN-U332095" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>554</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0066K03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U332095" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="118781" e_stop="119334"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTTTTCAATTCATATAGGAGGGGAGCTCATCATTCCACTCTGTTAAATCTCTGATTTGGTGGTTCCCTTCATGCTTGACATCAAAGCTTTCATTCAATCATTTTCAATGCCTCTTCCTTGGACTTTTAAATTAAAAGATTTGGGGTTTTCAAGAAAATCTCAGATAGCTCTCTCTGTTTGTAGTTGAGTATTTGTTGTTTTCTCTATTTCAAGAATTTGGGTGTTTCAAGAATCCCTTTTGTCCTGCCATTTTACACCTTTAGGAGTGGTGAGTTTCAACTCTTCTTTCTTTGTTTCTTGACAACTATACTGTTAAAGGTTTGATCTTTTGTTTTGTTTGCTGTCCTTTTGGAGAACGAAAGAAAGGAACAATTTGTGTTTTTTTTATTGTTAAGTGTTGGAGTAGTAGCTATCTTTTATCAGAGGGGAAAAGATTAGCTCTTTGATGTTTTGTCCTAATTAGTAGATATTCATTCTTATGATCAAAGAGTTCCTTAGTTCTGTGTAGTCAACCTGATTTCAATTTCATCATCCCTTAAGTAAAAAAAATGC</genome_strand>
        <mrna_strand>AATTTTTCAATTCATATAGGAGGGGAGCTCATCATTCCACTCTGTTAAATCTCTGATTTGGTGGTTCCCTTCATGCTTGACATCAAAGCTTTCATTCAATCATTTTCAATGCCTCTTCCTTGGACTTTTAAATTAAAAGATTTGGGGTTTTCAAGAAAATCTCAGATAGCTCTCTCTGTTTGTAGTTGAGTATTTGTTGTTTTCTCTATTTCAAGAATTTGGGTGTTTCAAGAATCCCTTTTGTCCTGCCATTTTACACCTTTAGGAGTGGTGAGTTTCAACTCTTCTTTCTTTGTTTCTTGACAACTATACTGTTAAAGGTTTGATCTTTTGTTTTGTTTGCTGTCCTTTTGGAGAACGAAAGAAAGGAACAATTTGTGTTTTTTTTATTGTTAAGTGTTGGAGTAGTAGCTATCTTTTATCAGAGGGGAAAAGATTAGCTCTTTGATGTTTTGTCCTAATTAGTAGATATTCATTCTTATGATCAAAGAGTTCCTTAGTTCTGTGTAGTCAACCTGATTTCAATTTCATCATCCCTTAAGTAAAAAAAATGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>21</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="+" PGL_start="8649" PGL_stop="11105"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="8649" e_stop="8762"/>
            <exon e_start="8864" e_stop="8953"/>
            <exon e_start="9386" e_stop="9492"/>
            <exon e_start="9573" e_stop="9721"/>
            <exon e_start="10573" e_stop="10655"/>
            <exon e_start="10740" e_stop="10835"/>
            <exon e_start="10983" e_stop="11105"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.652" e_score="1.000"/>
          <exon-intron don_prob="0.868" acc_prob="0.978" e_score="1.000"/>
          <exon-intron don_prob="0.829" acc_prob="0.883" e_score="1.000"/>
          <exon-intron don_prob="0.982" acc_prob="0.848" e_score="1.000"/>
          <exon-intron don_prob="0.972" acc_prob="0.752" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.980" e_score="1.000"/>
          <exon-only e_score="0.992"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="8649" e_stop="8762" e_length="114"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.652">
            <gDNA_intron_boundary i_start="8763" i_stop="8863" i_length="101"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="8864" e_stop="8953" e_length="90"/>
          </exon>
          <intron i_serial="2" don_prob="0.868" acc_prob="0.978">
            <gDNA_intron_boundary i_start="8954" i_stop="9385" i_length="432"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="9386" e_stop="9492" e_length="107"/>
          </exon>
          <intron i_serial="3" don_prob="0.829" acc_prob="0.883">
            <gDNA_intron_boundary i_start="9493" i_stop="9572" i_length="80"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="9573" e_stop="9721" e_length="149"/>
          </exon>
          <intron i_serial="4" don_prob="0.982" acc_prob="0.848">
            <gDNA_intron_boundary i_start="9722" i_stop="10572" i_length="851"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="10573" e_stop="10655" e_length="83"/>
          </exon>
          <intron i_serial="5" don_prob="0.972" acc_prob="0.752">
            <gDNA_intron_boundary i_start="10656" i_stop="10739" i_length="84"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="10740" e_stop="10835" e_length="96"/>
          </exon>
          <intron i_serial="6" don_prob="0.996" acc_prob="0.980">
            <gDNA_intron_boundary i_start="10836" i_stop="10982" i_length="147"/>
          </intron>
          <exon e_serial="7" e_score="0.992">
            <gDNA_exon_boundary e_start="10983" e_stop="11105" e_length="123"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="8649" stop="8762"/>
              <exon start="8864" stop="8953"/>
              <exon start="9386" stop="9492"/>
              <exon start="9573" stop="9721"/>
              <exon start="10573" stop="10655"/>
              <exon start="10740" stop="10835"/>
              <exon start="10983" stop="11105"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U326538" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTCGATGAAGAGACATTAATGAGAATTGTTCCTTTCTGGAGAACGTCCCTCAGAGATACAAATACTCCAAGTCAAAAGTATTACATTGATCATTTTGAGATACATCCTGTTAAG : GTTGTGGCAAGCTTTCTTCCAGGGGAATCTTATGCTAACCATAGCTCCACGCAAGAGACACTAAGATCTTTACTTCACAGTGTTATAAAG : ATACCTCCTGTCAAAAATATGACCGTAGAGCTCAATGGCATCCTTGTAACTCATGCATTGGTCACTTTGCGGGAGTTGTCAATTAAATGTGCCCAACATTATTCTTG : GTATGCAATGAGAGCAGTATACATTGCAAAGGGAAGTCCCTTGCTGCCACCAGCTTTTGCTTCTATATTTGACGACTTAGCTTCATCATCTCTGGATGTTTTCTTTGATCCTTCTACTGGCCATCTTAATCTTCCTGGCCTCACAATTG : GTACTTTCAAACTCATTCGTAAGTGTATTGATGGTAAAGAGTTTTCTGGAACAAAAAGATACTTTGGCGATCTAGGGAAAACT : TTTAAGTCAGCAGGATCAAATATCCTGTTTGCTGCTGTCACTGAAATATCAGACTCGGTTCTGAAAGGAGCAGAAGCTAGTGGTTTAAATGGAATG : GTGAATGGTTTCCATCAAGGAATACTTAAATTGGCAATGGAACCTACATTACTGGGGAGTGCTTTCATGGAAGGTGGCCCTGATCGAAAAATTGGGCTTGATCGAAGTCCTGGGGTTGATGAG</gDNA_template>
            <first_frame> L  D  E  E  T  L  M  R  I  V  P  F  W  R  T  S  L  R  D  T  N  T  P  S  Q  K  Y  Y  I  D  H  F  E  I  H  P  V  K  :  V  V  A  S  F  L  P  G  E  S  Y  A  N  H  S  S  T  Q  E  T  L  R  S  L  L  H  S  V  I  K  :  I  P  P  V  K  N  M  T  V  E  L  N  G  I  L  V  T  H  A  L  V  T  L  R  E  L  S  I  K  C  A  Q  H  Y  S  W :   Y  A  M  R  A  V  Y  I  A  K  G  S  P  L  L  P  P  A  F  A  S  I  F  D  D  L  A  S  S  S  L  D  V  F  F  D  P  S  T  G  H  L  N  L  P  G  L  T  I   : G  T  F  K  L  I  R  K  C  I  D  G  K  E  F  S  G  T  K  R  Y  F  G  D  L  G  K  T  :  F  K  S  A  G  S  N  I  L  F  A  A  V  T  E  I  S  D  S  V  L  K  G  A  E  A  S  G  L  N  G  M  :  V  N  G  F  H  Q  G  I  L  K  L  A  M  E  P  T  L  L  G  S  A  F  M  E  G  G  P  D  R  K  I  G  L  D  R  S  P  G  V  D  E </first_frame>
            <second_frame>  S  M  K  R  H  *  *  E  L  F  L  S  G  E  R  P  S  E  I  Q  I  L  Q  V  K  S  I  T  L  I  I  L  R  Y  I  L  L  R :   L  W  Q  A  F  F  Q  G  N  L  M  L  T  I  A  P  R  K  R  H  *  D  L  Y  F  T  V  L  *  R :   Y  L  L  S  K  I  *  P  *  S  S  M  A  S  L  *  L  M  H  W  S  L  C  G  S  C  Q  L  N  V  P  N  I  I  L   : G  M  Q  *  E  Q  Y  T  L  Q  R  E  V  P  C  C  H  Q  L  L  L  L  Y  L  T  T  *  L  H  H  L  W  M  F  S  L  I  L  L  L  A  I  L  I  F  L  A  S  Q  L  :  V  L  S  N  S  F  V  S  V  L  M  V  K  S  F  L  E  Q  K  D  T  L  A  I  *  G  K  L :   L  S  Q  Q  D  Q  I  S  C  L  L  L  S  L  K  Y  Q  T  R  F  *  K  E  Q  K  L  V  V  *  M  E  W :   *  M  V  S  I  K  E  Y  L  N  W  Q  W  N  L  H  Y  W  G  V  L  S  W  K  V  A  L  I  E  K  L  G  L  I  E  V  L  G  L  M   </second_frame>
            <third_frame>   R  *  R  D  I  N  E  N  C  S  F  L  E  N  V  P  Q  R  Y  K  Y  S  K  S  K  V  L  H  *  S  F  *  D  T  S  C  *   : G  C  G  K  L  S  S  R  G  I  L  C  *  P  *  L  H  A  R  D  T  K  I  F  T  S  Q  C  Y  K   : D  T  S  C  Q  K  Y  D  R  R  A  Q  W  H  P  C  N  S  C  I  G  H  F  A  G  V  V  N  *  M  C  P  T  L  F  L  :  V  C  N  E  S  S  I  H  C  K  G  K  S  L  A  A  T  S  F  C  F  Y  I  *  R  L  S  F  I  I  S  G  C  F  L  *  S  F  Y  W  P  S  *  S  S  W  P  H  N  W :   Y  F  Q  T  H  S  *  V  Y  *  W  *  R  V  F  W  N  K  K  I  L  W  R  S  R  E  N   : F  *  V  S  R  I  K  Y  P  V  C  C  C  H  *  N  I  R  L  G  S  E  R  S  R  S  *  W  F  K  W  N   : G  E  W  F  P  S  R  N  T  *  I  G  N  G  T  Y  I  T  G  E  C  F  H  G  R  W  P  *  S  K  N  W  A  *  S  K  S  W  G  *  *  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0066K03.2" strand="+"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="8649" stop="8762"/>
                    <exon start="8864" stop="8953"/>
                    <exon start="9386" stop="9492"/>
                    <exon start="9573" stop="9721"/>
                    <exon start="10573" stop="10655"/>
                    <exon start="10740" stop="10835"/>
                    <exon start="10983" stop="11105"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>762</number_coding_nucleotides>
                  <number_encoded_amino_acids>254</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LDEETLMRIVPFWRTSLRDTNTPSQKYYIDHFEIHPVKVVASFLPGESYANHSSTQETLRSLLHSVIKIPPVKNMTVELNGILVTHALVTLRELSIKCAQHYSWYAMRAVYIAKGSPLLPPAFASIFDDLASSSLDVFFDPSTGHLNLPGLTIGTFKLIRKCIDGKEFSGTKRYFGDLGKTFKSAGSNILFAAVTEISDSVLKGAEASGLNGMVNGFHQGILKLAMEPTLLGSAFMEGGPDRKIGLDRSPGVDE</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="+" PGL_start="13239" PGL_stop="13454"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="13239" e_stop="13454"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="13239" e_stop="13454" e_length="216"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="13239" stop="13454"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U329310" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AACATTTTCTTGTCTTAAAGCTTTTTCTAGGAAAAAGAATAAATAGCAAGTGCATTTTGTTCATATGAGAGGATAATAGATGATCCTTCCCCTTTCGTTTTTATTCCAAATGTATATAACAAAGCAAAAATAAATAAATTTTTTTTTGGTCTTCCTGTATGCCTACACAAGAATTTAGCACAGAAACTTTCTACATTCTATTGAACATTGTATGAA</gDNA_template>
            <first_frame> N  I  F  L  S  *  S  F  F  *  E  K  E  *  I  A  S  A  F  C  S  Y  E  R  I  I  D  D  P  S  P  F  V  F  I  P  N  V  Y  N  K  A  K  I  N  K  F  F  F  G  L  P  V  C  L  H  K  N  L  A  Q  K  L  S  T  F  Y  *  T  L  Y  E </first_frame>
            <second_frame>  T  F  S  C  L  K  A  F  S  R  K  K  N  K  *  Q  V  H  F  V  H  M  R  G  *  *  M  I  L  P  L  S  F  L  F  Q  M  Y  I  T  K  Q  K  *  I  N  F  F  L  V  F  L  Y  A  Y  T  R  I  *  H  R  N  F  L  H  S  I  E  H  C  M   </second_frame>
            <third_frame>   H  F  L  V  L  K  L  F  L  G  K  R  I  N  S  K  C  I  L  F  I  *  E  D  N  R  *  S  F  P  F  R  F  Y  S  K  C  I  *  Q  S  K  N  K  *  I  F  F  W  S  S  C  M  P  T  Q  E  F  S  T  E  T  F  Y  I  L  L  N  I  V  *  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02SLm0066K03.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="+" PGL_start="13964" PGL_stop="14333"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="13964" e_stop="14333"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.989"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.989">
            <gDNA_exon_boundary e_start="13964" e_stop="14333" e_length="370"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="13964" stop="14333"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U332373" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTTTATGTTGTGAGATACAAAAAAATATGGCTTTTGCGATATCCAAAGAGAAAATAGGCAGTGATGATCAAGATAGTGTCGAGACAGAGAGAGTAATAAGTAGCCAACTCTATTTGAAGTCATCGTCCCATGAAAATCTTGACAAAAATGTTGTGCTGAGGAGACTTCGTCACCATAAATACTTGCAAAAGGTTCGTGGAAATTTGAAGACTCTATTGGACAGTTATTCGACAAGGGATTATTATGAGCACAAGTGGCTTGAACAGGGCGACGTTTTCTGCTCCCCTTAGCATATATATTTCCCTCCTTGTACCAAACATCCTTACCTCTCTGTCTCTTGAGTTTCTGTGGGCGGAGCCTAAATTTGAAG</gDNA_template>
            <first_frame> F  Y  V  V  R  Y  K  K  I  W  L  L  R  Y  P  K  R  K  *  A  V  M  I  K  I  V  S  R  Q  R  E  *  *  V  A  N  S  I  *  S  H  R  P  M  K  I  L  T  K  M  L  C  *  G  D  F  V  T  I  N  T  C  K  R  F  V  E  I  *  R  L  Y  W  T  V  I  R  Q  G  I  I  M  S  T  S  G  L  N  R  A  T  F  S  A  P  L  S  I  Y  I  S  L  L  V  P  N  I  L  T  S  L  S  L  E  F  L  W  A  E  P  K  F  E  </first_frame>
            <second_frame>  F  M  L  *  D  T  K  K  Y  G  F  C  D  I  Q  R  E  N  R  Q  *  *  S  R  *  C  R  D  R  E  S  N  K  *  P  T  L  F  E  V  I  V  P  *  K  S  *  Q  K  C  C  A  E  E  T  S  S  P  *  I  L  A  K  G  S  W  K  F  E  D  S  I  G  Q  L  F  D  K  G  L  L  *  A  Q  V  A  *  T  G  R  R  F  L  L  P  L  A  Y  I  F  P  S  L  Y  Q  T  S  L  P  L  C  L  L  S  F  C  G  R  S  L  N  L  K </second_frame>
            <third_frame>   L  C  C  E  I  Q  K  N  M  A  F  A  I  S  K  E  K  I  G  S  D  D  Q  D  S  V  E  T  E  R  V  I  S  S  Q  L  Y  L  K  S  S  S  H  E  N  L  D  K  N  V  V  L  R  R  L  R  H  H  K  Y  L  Q  K  V  R  G  N  L  K  T  L  L  D  S  Y  S  T  R  D  Y  Y  E  H  K  W  L  E  Q  G  D  V  F  C  S  P  *  H  I  Y  F  P  P  C  T  K  H  P  Y  L  S  V  S  *  V  S  V  G  G  A  *  I  *   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0066K03.2" strand="+"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="13966" stop="14253"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>285</number_coding_nucleotides>
                  <number_encoded_amino_acids>95</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LCCEIQKNMAFAISKEKIGSDDQDSVETERVISSQLYLKSSSHENLDKNVVLRRLRHHKYLQKVRGNLKTLLDSYSTRDYYEHKWLEQGDVFCSP*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="+" PGL_start="23984" PGL_stop="32148"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="23984" e_stop="24208"/>
            <exon e_start="24421" e_stop="25208"/>
            <exon e_start="28267" e_stop="28341"/>
            <exon e_start="28595" e_stop="30073"/>
            <exon e_start="31171" e_stop="31185"/>
            <exon e_start="32137" e_stop="32148"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.908" acc_prob="0.862" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.953" e_score="0.996"/>
          <exon-intron don_prob="0.993" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.997"/>
          <exon-intron don_prob="0.104" acc_prob="0.274" e_score="0.800"/>
          <exon-only e_score="0.667"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="23984" e_stop="24208" e_length="225"/>
          </exon>
          <intron i_serial="1" don_prob="0.908" acc_prob="0.862">
            <gDNA_intron_boundary i_start="24209" i_stop="24420" i_length="212"/>
          </intron>
          <exon e_serial="2" e_score="0.996">
            <gDNA_exon_boundary e_start="24421" e_stop="25208" e_length="788"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="0.953">
            <gDNA_intron_boundary i_start="25209" i_stop="28266" i_length="3058"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="28267" e_stop="28341" e_length="75"/>
          </exon>
          <intron i_serial="3" don_prob="0.993" acc_prob="0.000">
            <gDNA_intron_boundary i_start="28342" i_stop="28594" i_length="253"/>
          </intron>
          <exon e_serial="4" e_score="0.997">
            <gDNA_exon_boundary e_start="28595" e_stop="30073" e_length="1479"/>
          </exon>
          <intron i_serial="4" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="30074" i_stop="31170" i_length="1097"/>
          </intron>
          <exon e_serial="5" e_score="0.800">
            <gDNA_exon_boundary e_start="31171" e_stop="31185" e_length="15"/>
          </exon>
          <intron i_serial="5" don_prob="0.104" acc_prob="0.274">
            <gDNA_intron_boundary i_start="31186" i_stop="32136" i_length="951"/>
          </intron>
          <exon e_serial="6" e_score="0.667">
            <gDNA_exon_boundary e_start="32137" e_stop="32148" e_length="12"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23984" stop="24208"/>
              <exon start="24421" stop="25208"/>
              <exon start="28267" stop="28341"/>
              <exon start="28595" stop="30073"/>
              <exon start="31171" stop="31185"/>
              <exon start="32137" stop="32148"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U318820" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GCGTGTGCGTAAAAAGAAGCTTCTTCCCGTCTCTTCCATCTCCGATTACTAGTCGATAGCTTTACTGTTACGAAACCCTGTTTTTGCAGAGCTGTTTTGGAGTTGAGATATTTCAAATTTTGGACTCTTAATTGCTGCTATTTTGCTTCCAATCAAAGAAAAGAAAAGTTGCAGACGAAGGAAGAGAGAGAAGTAAAAGACATTAATACATGAAACCAGTCCACG : AAGCAGATGATTGTTCACTTTAATTCAATTTCGAGTCATGGGTTTTCATCACATCATTATTATTAGATTCGTTTTCTCAATTTTATTGGGTTGGTTATCATCGTCAGTTGAGGCTACTAATTCAACTAAGTGCAATCAGTACTGTGGAGCTGCTGGTTCTTATAGTCCGCGTGTTTCTTATCCATTTGGATTCTCAGAGGGTTGTGGGATTCGTTTAGACTGTACTGAAAGTACTGGAGAAATCAGAATTGGGGAATATATAATACAGAATGTGACTTCAGAGACTCTGATGGTTAACTTCTCGATGAATTGCAGCCGTCCGATTGAGGATCTACAGCAATTTGATCGAACCAACTTTGGTATGACTTGGAGAAATGGACTGCTTCTACACAATTGCAAAGTACCGAAGAGCGAATGTACCATACTATCGGAAATTTTAAGCACGCGTTTGAACATACAGTCATGTGATTCGAAGAAGGAGAATGTCAGTTGTTATTCTGAGGCGAGGGCGGATTATTTAGATTACAAGAAATTGAAGAATACAGGGTGTGGAACTGTGATTTCGTCCATCTTGATTGGTATGGATAATGATACAATGAAGAGTTCTGCCATGTTTATCGAGTTTCAGACGATGGAATTAGCGTGGGGATTGGAAGGGGATTGTGCATGTCATAACGATGCAAATTGTACCAACGTTTCTCTCCCGGGGAACCGAAAAGGTTTCCGGTGCCGGTGTAAAGATGGATTCGTCGGTGATGGCTTCAGCGACGGTGATGGCTGCCGGAAAG : TTTCAAGATGTAATCCTTCCAGATACCTCTCTGGACGATGTGGTGGAACTACCAGAATTGGTGTGCTCGTTGGAG : GGATTATTGCTGGAGCTGGTTTAATGGCTGCTTTGGCTGTTCTTTGCTACTGCATTCGAAGACGTTCTGCATCTCTCAAGAAAAGAATGAGCGCAAGACGCCTTCTCTCTGAAGCTGCAGGCAGCAACAGTGTTCATGTATTTCAATACAAAGAAATTGAGAGAGCAACAAATAGTTTCTCTGAGAAACAGAGGCTGGGCATAGGGGCTTATGGCACAGTTTATGCTGGAAAGCTCCACAGTGATGAATGGGTTGCAATTAAGAAACTAAGACACCGGGATCCGGATGGTGTTGAACAAGTGATGAATGAGGTTAAGCTTTTGTCTTCTGTAAGTCATCCAAACTTAGTCCGCCTCTTGGGTTGTTGTATAGAAAATGGTGAACAGATTCTTGTTTATGAATTTATGCCCAACGGAACTCTAGCTCAGCATCTACAGAGAGAAAGGAGTTCAGGACTTCCGTGGACAATACGTCTCACTATCGCAACAGAAACTGCTCATGCGATTGCTCACCTTCACTCAGCAATGAATCCACCAATATACCACAGGGATATCAAATCAAGTAACATACTATTGGATTACAACTTCAACTCAAAAGTTGCAGACTTTGGTCTTTCCAGATTTGGCATGACAGATGATTCCCACATTTCTACAGCACCACAAGGTACTCCAGGTTATGTGGATCCTCAGTACCATCAGAATTACCATCTTTCCGATAAGAGTGATGTGTACAGCTTCGGGGTGGTTCTTGTAGAAATCATTACAGCAATGAAAGTGGTTGATTTCTCTAGATCACACAGTGAGATTAATTTGGCTGCACTTGCAATAGACAGAATAGGTAAGGGTCGTGTGGATGAGATCATCGATCCATTTCTAGAGCCACACAGAGATGCATGGACTCTATCATCAGTTCATAGAGTTGCAGAGCTTGCTTTTAGATGCCTTGCATTTCATAGGGATATGAGGCCTTCAATGACAGAAGTGGCAGACGAGCTGGAACAGATCAGGCTCAGCAGTTGGGCATCATTGGAGGACAATGTATGCATGACTTCATCAGTGAATTCCTCTTGCTCATCTCCCCGTAGTATGAGTGAGACATCTTTTCGTAGTACAACAACTAAGAAAGGAGTAGGGAGTAGGAGGTTGATTGTTCCCCAGAAGATAGCGAATTCACTGGCAATCATGGAGGAAATAAAAGACAGTTCCCCTGTTTCTGTACAGGATCCTTGGTTAAGTGAAGAGAGTCCCCCTTCAACAAATCGATTATTAGGTAATTCTGGTCGATGATGACTTGAAAAAAGAAGTTCGCTCTAGGTAGAAAACTGAGGGGGATCACCTGTAATCTATCACCTCCTTTTCCTGCCTTCTAATCTACTGAGAATATCAAAGAGTATTATTAGAGCACTTCTCTTTGTATCAAAATTTTTATTGCTTCATACGCAGAATTATAGAATGTGAAATAGTATTTGCAATGCCATGA : CTAAAAAAAATAAGA : AGAGAAAGACAA</gDNA_template>
            <first_frame> A  C  A  *  K  E  A  S  S  R  L  F  H  L  R  L  L  V  D  S  F  T  V  T  K  P  C  F  C  R  A  V  L  E  L  R  Y  F  K  F  W  T  L  N  C  C  Y  F  A  S  N  Q  R  K  E  K  L  Q  T  K  E  E  R  E  V  K  D  I  N  T  *  N  Q  S  T  :  K  Q  M  I  V  H  F  N  S  I  S  S  H  G  F  S  S  H  H  Y  Y  *  I  R  F  L  N  F  I  G  L  V  I  I  V  S  *  G  Y  *  F  N  *  V  Q  S  V  L  W  S  C  W  F  L  *  S  A  C  F  L  S  I  W  I  L  R  G  L  W  D  S  F  R  L  Y  *  K  Y  W  R  N  Q  N  W  G  I  Y  N  T  E  C  D  F  R  D  S  D  G  *  L  L  D  E  L  Q  P  S  D  *  G  S  T  A  I  *  S  N  Q  L  W  Y  D  L  E  K  W  T  A  S  T  Q  L  Q  S  T  E  E  R  M  Y  H  T  I  G  N  F  K  H  A  F  E  H  T  V  M  *  F  E  E  G  E  C  Q  L  L  F  *  G  E  G  G  L  F  R  L  Q  E  I  E  E  Y  R  V  W  N  C  D  F  V  H  L  D  W  Y  G  *  *  Y  N  E  E  F  C  H  V  Y  R  V  S  D  D  G  I  S  V  G  I  G  R  G  L  C  M  S  *  R  C  K  L  Y  Q  R  F  S  P  G  E  P  K  R  F  P  V  P  V  *  R  W  I  R  R  *  W  L  Q  R  R  *  W  L  P  E  S :   F  K  M  *  S  F  Q  I  P  L  W  T  M  W  W  N  Y  Q  N  W  C  A  R  W  R :   D  Y  C  W  S  W  F  N  G  C  F  G  C  S  L  L  L  H  S  K  T  F  C  I  S  Q  E  K  N  E  R  K  T  P  S  L  *  S  C  R  Q  Q  Q  C  S  C  I  S  I  Q  R  N  *  E  S  N  K  *  F  L  *  E  T  E  A  G  H  R  G  L  W  H  S  L  C  W  K  A  P  Q  *  *  M  G  C  N  *  E  T  K  T  P  G  S  G  W  C  *  T  S  D  E  *  G  *  A  F  V  F  C  K  S  S  K  L  S  P  P  L  G  L  L  Y  R  K  W  *  T  D  S  C  L  *  I  Y  A  Q  R  N  S  S  S  A  S  T  E  R  K  E  F  R  T  S  V  D  N  T  S  H  Y  R  N  R  N  C  S  C  D  C  S  P  S  L  S  N  E  S  T  N  I  P  Q  G  Y  Q  I  K  *  H  T  I  G  L  Q  L  Q  L  K  S  C  R  L  W  S  F  Q  I  W  H  D  R  *  F  P  H  F  Y  S  T  T  R  Y  S  R  L  C  G  S  S  V  P  S  E  L  P  S  F  R  *  E  *  C  V  Q  L  R  G  G  S  C  R  N  H  Y  S  N  E  S  G  *  F  L  *  I  T  Q  *  D  *  F  G  C  T  C  N  R  Q  N  R  *  G  S  C  G  *  D  H  R  S  I  S  R  A  T  Q  R  C  M  D  S  I  I  S  S  *  S  C  R  A  C  F  *  M  P  C  I  S  *  G  Y  E  A  F  N  D  R  S  G  R  R  A  G  T  D  Q  A  Q  Q  L  G  I  I  G  G  Q  C  M  H  D  F  I  S  E  F  L  L  L  I  S  P  *  Y  E  *  D  I  F  S  *  Y  N  N  *  E  R  S  R  E  *  E  V  D  C  S  P  E  D  S  E  F  T  G  N  H  G  G  N  K  R  Q  F  P  C  F  C  T  G  S  L  V  K  *  R  E  S  P  F  N  K  S  I  I  R  *  F  W  S  M  M  T  *  K  K  K  F  A  L  G  R  K  L  R  G  I  T  C  N  L  S  P  P  F  P  A  F  *  S  T  E  N  I  K  E  Y  Y  *  S  T  S  L  C  I  K  I  F  I  A  S  Y  A  E  L  *  N  V  K  *  Y  L  Q  C  H  D :   *  K  K  *  E :   E  K  D   </first_frame>
            <second_frame>  R  V  R  K  K  K  L  L  P  V  S  S  I  S  D  Y  *  S  I  A  L  L  L  R  N  P  V  F  A  E  L  F  W  S  *  D  I  S  N  F  G  L  L  I  A  A  I  L  L  P  I  K  E  K  K  S  C  R  R  R  K  R  E  K  *  K  T  L  I  H  E  T  S  P  R :   S  R  *  L  F  T  L  I  Q  F  R  V  M  G  F  H  H  I  I  I  I  R  F  V  F  S  I  L  L  G  W  L  S  S  S  V  E  A  T  N  S  T  K  C  N  Q  Y  C  G  A  A  G  S  Y  S  P  R  V  S  Y  P  F  G  F  S  E  G  C  G  I  R  L  D  C  T  E  S  T  G  E  I  R  I  G  E  Y  I  I  Q  N  V  T  S  E  T  L  M  V  N  F  S  M  N  C  S  R  P  I  E  D  L  Q  Q  F  D  R  T  N  F  G  M  T  W  R  N  G  L  L  L  H  N  C  K  V  P  K  S  E  C  T  I  L  S  E  I  L  S  T  R  L  N  I  Q  S  C  D  S  K  K  E  N  V  S  C  Y  S  E  A  R  A  D  Y  L  D  Y  K  K  L  K  N  T  G  C  G  T  V  I  S  S  I  L  I  G  M  D  N  D  T  M  K  S  S  A  M  F  I  E  F  Q  T  M  E  L  A  W  G  L  E  G  D  C  A  C  H  N  D  A  N  C  T  N  V  S  L  P  G  N  R  K  G  F  R  C  R  C  K  D  G  F  V  G  D  G  F  S  D  G  D  G  C  R  K   : V  S  R  C  N  P  S  R  Y  L  S  G  R  C  G  G  T  T  R  I  G  V  L  V  G   : G  I  I  A  G  A  G  L  M  A  A  L  A  V  L  C  Y  C  I  R  R  R  S  A  S  L  K  K  R  M  S  A  R  R  L  L  S  E  A  A  G  S  N  S  V  H  V  F  Q  Y  K  E  I  E  R  A  T  N  S  F  S  E  K  Q  R  L  G  I  G  A  Y  G  T  V  Y  A  G  K  L  H  S  D  E  W  V  A  I  K  K  L  R  H  R  D  P  D  G  V  E  Q  V  M  N  E  V  K  L  L  S  S  V  S  H  P  N  L  V  R  L  L  G  C  C  I  E  N  G  E  Q  I  L  V  Y  E  F  M  P  N  G  T  L  A  Q  H  L  Q  R  E  R  S  S  G  L  P  W  T  I  R  L  T  I  A  T  E  T  A  H  A  I  A  H  L  H  S  A  M  N  P  P  I  Y  H  R  D  I  K  S  S  N  I  L  L  D  Y  N  F  N  S  K  V  A  D  F  G  L  S  R  F  G  M  T  D  D  S  H  I  S  T  A  P  Q  G  T  P  G  Y  V  D  P  Q  Y  H  Q  N  Y  H  L  S  D  K  S  D  V  Y  S  F  G  V  V  L  V  E  I  I  T  A  M  K  V  V  D  F  S  R  S  H  S  E  I  N  L  A  A  L  A  I  D  R  I  G  K  G  R  V  D  E  I  I  D  P  F  L  E  P  H  R  D  A  W  T  L  S  S  V  H  R  V  A  E  L  A  F  R  C  L  A  F  H  R  D  M  R  P  S  M  T  E  V  A  D  E  L  E  Q  I  R  L  S  S  W  A  S  L  E  D  N  V  C  M  T  S  S  V  N  S  S  C  S  S  P  R  S  M  S  E  T  S  F  R  S  T  T  T  K  K  G  V  G  S  R  R  L  I  V  P  Q  K  I  A  N  S  L  A  I  M  E  E  I  K  D  S  S  P  V  S  V  Q  D  P  W  L  S  E  E  S  P  P  S  T  N  R  L  L  G  N  S  G  R  *  *  L  E  K  R  S  S  L  *  V  E  N  *  G  G  S  P  V  I  Y  H  L  L  F  L  P  S  N  L  L  R  I  S  K  S  I  I  R  A  L  L  F  V  S  K  F  L  L  L  H  T  Q  N  Y  R  M  *  N  S  I  C  N  A  M   : T  K  K  N  K   : K  R  K  T  </second_frame>
            <third_frame>   V  C  V  K  R  S  F  F  P  S  L  P  S  P  I  T  S  R  *  L  Y  C  Y  E  T  L  F  L  Q  S  C  F  G  V  E  I  F  Q  I  L  D  S  *  L  L  L  F  C  F  Q  S  K  K  R  K  V  A  D  E  G  R  E  R  S  K  R  H  *  Y  M  K  P  V  H   : E  A  D  D  C  S  L  *  F  N  F  E  S  W  V  F  I  T  S  L  L  L  D  S  F  S  Q  F  Y  W  V  G  Y  H  R  Q  L  R  L  L  I  Q  L  S  A  I  S  T  V  E  L  L  V  L  I  V  R  V  F  L  I  H  L  D  S  Q  R  V  V  G  F  V  *  T  V  L  K  V  L  E  K  S  E  L  G  N  I  *  Y  R  M  *  L  Q  R  L  *  W  L  T  S  R  *  I  A  A  V  R  L  R  I  Y  S  N  L  I  E  P  T  L  V  *  L  G  E  M  D  C  F  Y  T  I  A  K  Y  R  R  A  N  V  P  Y  Y  R  K  F  *  A  R  V  *  T  Y  S  H  V  I  R  R  R  R  M  S  V  V  I  L  R  R  G  R  I  I  *  I  T  R  N  *  R  I  Q  G  V  E  L  *  F  R  P  S  *  L  V  W  I  M  I  Q  *  R  V  L  P  C  L  S  S  F  R  R  W  N  *  R  G  D  W  K  G  I  V  H  V  I  T  M  Q  I  V  P  T  F  L  S  R  G  T  E  K  V  S  G  A  G  V  K  M  D  S  S  V  M  A  S  A  T  V  M  A  A  G  K  :  F  Q  D  V  I  L  P  D  T  S  L  D  D  V  V  E  L  P  E  L  V  C  S  L  E  :  G  L  L  L  E  L  V  *  W  L  L  W  L  F  F  A  T  A  F  E  D  V  L  H  L  S  R  K  E  *  A  Q  D  A  F  S  L  K  L  Q  A  A  T  V  F  M  Y  F  N  T  K  K  L  R  E  Q  Q  I  V  S  L  R  N  R  G  W  A  *  G  L  M  A  Q  F  M  L  E  S  S  T  V  M  N  G  L  Q  L  R  N  *  D  T  G  I  R  M  V  L  N  K  *  *  M  R  L  S  F  C  L  L  *  V  I  Q  T  *  S  A  S  W  V  V  V  *  K  M  V  N  R  F  L  F  M  N  L  C  P  T  E  L  *  L  S  I  Y  R  E  K  G  V  Q  D  F  R  G  Q  Y  V  S  L  S  Q  Q  K  L  L  M  R  L  L  T  F  T  Q  Q  *  I  H  Q  Y  T  T  G  I  S  N  Q  V  T  Y  Y  W  I  T  T  S  T  Q  K  L  Q  T  L  V  F  P  D  L  A  *  Q  M  I  P  T  F  L  Q  H  H  K  V  L  Q  V  M  W  I  L  S  T  I  R  I  T  I  F  P  I  R  V  M  C  T  A  S  G  W  F  L  *  K  S  L  Q  Q  *  K  W  L  I  S  L  D  H  T  V  R  L  I  W  L  H  L  Q  *  T  E  *  V  R  V  V  W  M  R  S  S  I  H  F  *  S  H  T  E  M  H  G  L  Y  H  Q  F  I  E  L  Q  S  L  L  L  D  A  L  H  F  I  G  I  *  G  L  Q  *  Q  K  W  Q  T  S  W  N  R  S  G  S  A  V  G  H  H  W  R  T  M  Y  A  *  L  H  Q  *  I  P  L  A  H  L  P  V  V  *  V  R  H  L  F  V  V  Q  Q  L  R  K  E  *  G  V  G  G  *  L  F  P  R  R  *  R  I  H  W  Q  S  W  R  K  *  K  T  V  P  L  F  L  Y  R  I  L  G  *  V  K  R  V  P  L  Q  Q  I  D  Y  *  V  I  L  V  D  D  D  L  K  K  E  V  R  S  R  *  K  T  E  G  D  H  L  *  S  I  T  S  F  S  C  L  L  I  Y  *  E  Y  Q  R  V  L  L  E  H  F  S  L  Y  Q  N  F  Y  C  F  I  R  R  I  I  E  C  E  I  V  F  A  M  P  *  :  L  K  K  I  R  :  R  E  R  Q </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0066K03.2" strand="+"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="24431" stop="25208"/>
                    <exon start="28267" stop="28341"/>
                    <exon start="28595" stop="29880"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>2136</number_coding_nucleotides>
                  <number_encoded_amino_acids>712</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LFTLIQFRVMGFHHIIIIRFVFSILLGWLSSSVEATNSTKCNQYCGAAGSYSPRVSYPFGFSEGCGIRLDCTESTGEIRIGEYIIQNVTSETLMVNFSMNCSRPIEDLQQFDRTNFGMTWRNGLLLHNCKVPKSECTILSEILSTRLNIQSCDSKKENVSCYSEARADYLDYKKLKNTGCGTVISSILIGMDNDTMKSSAMFIEFQTMELAWGLEGDCACHNDANCTNVSLPGNRKGFRCRCKDGFVGDGFSDGDGCRKVSRCNPSRYLSGRCGGTTRIGVLVGGIIAGAGLMAALAVLCYCIRRRSASLKKRMSARRLLSEAAGSNSVHVFQYKEIERATNSFSEKQRLGIGAYGTVYAGKLHSDEWVAIKKLRHRDPDGVEQVMNEVKLLSSVSHPNLVRLLGCCIENGEQILVYEFMPNGTLAQHLQRERSSGLPWTIRLTIATETAHAIAHLHSAMNPPIYHRDIKSSNILLDYNFNSKVADFGLSRFGMTDDSHISTAPQGTPGYVDPQYHQNYHLSDKSDVYSFGVVLVEIITAMKVVDFSRSHSEINLAALAIDRIGKGRVDEIIDPFLEPHRDAWTLSSVHRVAELAFRCLAFHRDMRPSMTEVADELEQIRLSSWASLEDNVCMTSSVNSSCSSPRSMSETSFRSTTTKKGVGSRRLIVPQKIANSLAIMEEIKDSSPVSVQDPWLSEESPPSTNRLLGNSGR*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0066K03.2" strand="+"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="23996" stop="24196"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>198</number_coding_nucleotides>
                  <number_encoded_amino_acids>66</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KEASSRLFHLRLLVDSFTVTKPCFCRAVLELRYFKFWTLNCCYFASNQRKEKLQTKEEREVKDINT*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="-" PGL_start="30861" PGL_stop="30010"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="30861" e_stop="30010"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.988"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.988">
            <gDNA_exon_boundary e_start="30861" e_stop="30010" e_length="852"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30861" stop="30010"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U317612" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ACACACTTCTTTGTGATTGTGGTGTCAAGGAGTGCAGACTTCATTTTGATTGTACAGAGAGCATAGCCATGTCTTCCACAACTACTTCACTTACAGTAAGGACTTACCCACCCCGTTGTGTGCTAAATGCAAACACAAATCCCCCTACCAAACAGGCAGCGGTGGCTCTCCGGGGGCGGAGGCAGTTGATCTCTCTGGTGACGGCGACAACGGTAGTGAAAGCGCTGGAGATGCCGTCCAAGGCTGCGGACATTGGCCTCTTTGGACTGAGAAAGAAGCTTAAGAAAGTAGAAGATGAGGCAGAAGAATTAGTGAAGGAGGGATTCGAGGCGGCAGACAAGGGAATTGCAGCGGCAGAGAAGGGAATTGAAGCGGCGGAGAAAGGATTACTGACGGCTGAGAAGGGGATTGAAGCAGCGGAGGAGAAGATCGAGAGTACAGTAAGTTTCGGTGGGTTGGCGCAAGCTGGAGCGGTGGCCGGAGCTGAATTTGTCGGAGTTTTGATTGCCGGAGCTGTAGTCAATGGTATTTTAGGACCTGAACCTCAAAAATCTTGAAGAGTTTATTGCTTGTCATACAATTTTTCATTGTTGTTATTTGCAAATTAAGTTTGATCTGTGTTTAGCTAAATTCAAAGCATGATCAATTCTATTAGTGTAACAATTAATCCTGTTATATAATATGTATTGATAAATTATTTAACATGTCAGGGTAGTCAAATTCTTGAAGATGATGTATGATGTAGGATTATAGTCGTTGTAAATAACAGGAAACACAACGATTCAAATTCATGGCATTGCAAATACTATTTCACATTCTATAATTCTGCGTATGAAGCAATAAAAATTTTGA</gDNA_template>
            <first_frame> T  H  F  F  V  I  V  V  S  R  S  A  D  F  I  L  I  V  Q  R  A  *  P  C  L  P  Q  L  L  H  L  Q  *  G  L  T  H  P  V  V  C  *  M  Q  T  Q  I  P  L  P  N  R  Q  R  W  L  S  G  G  G  G  S  *  S  L  W  *  R  R  Q  R  *  *  K  R  W  R  C  R  P  R  L  R  T  L  A  S  L  D  *  E  R  S  L  R  K  *  K  M  R  Q  K  N  *  *  R  R  D  S  R  R  Q  T  R  E  L  Q  R  Q  R  R  E  L  K  R  R  R  K  D  Y  *  R  L  R  R  G  L  K  Q  R  R  R  R  S  R  V  Q  *  V  S  V  G  W  R  K  L  E  R  W  P  E  L  N  L  S  E  F  *  L  P  E  L  *  S  M  V  F  *  D  L  N  L  K  N  L  E  E  F  I  A  C  H  T  I  F  H  C  C  Y  L  Q  I  K  F  D  L  C  L  A  K  F  K  A  *  S  I  L  L  V  *  Q  L  I  L  L  Y  N  M  Y  *  *  I  I  *  H  V  R  V  V  K  F  L  K  M  M  Y  D  V  G  L  *  S  L  *  I  T  G  N  T  T  I  Q  I  H  G  I  A  N  T  I  S  H  S  I  I  L  R  M  K  Q  *  K  F  * </first_frame>
            <second_frame>  H  T  S  L  *  L  W  C  Q  G  V  Q  T  S  F  *  L  Y  R  E  H  S  H  V  F  H  N  Y  F  T  Y  S  K  D  L  P  T  P  L  C  A  K  C  K  H  K  S  P  Y  Q  T  G  S  G  G  S  P  G  A  E  A  V  D  L  S  G  D  G  D  N  G  S  E  S  A  G  D  A  V  Q  G  C  G  H  W  P  L  W  T  E  K  E  A  *  E  S  R  R  *  G  R  R  I  S  E  G  G  I  R  G  G  R  Q  G  N  C  S  G  R  E  G  N  *  S  G  G  E  R  I  T  D  G  *  E  G  D  *  S  S  G  G  E  D  R  E  Y  S  K  F  R  W  V  G  A  S  W  S  G  G  R  S  *  I  C  R  S  F  D  C  R  S  C  S  Q  W  Y  F  R  T  *  T  S  K  I  L  K  S  L  L  L  V  I  Q  F  F  I  V  V  I  C  K  L  S  L  I  C  V  *  L  N  S  K  H  D  Q  F  Y  *  C  N  N  *  S  C  Y  I  I  C  I  D  K  L  F  N  M  S  G  *  S  N  S  *  R  *  C  M  M  *  D  Y  S  R  C  K  *  Q  E  T  Q  R  F  K  F  M  A  L  Q  I  L  F  H  I  L  *  F  C  V  *  S  N  K  N  F   </second_frame>
            <third_frame>   T  L  L  C  D  C  G  V  K  E  C  R  L  H  F  D  C  T  E  S  I  A  M  S  S  T  T  T  S  L  T  V  R  T  Y  P  P  R  C  V  L  N  A  N  T  N  P  P  T  K  Q  A  A  V  A  L  R  G  R  R  Q  L  I  S  L  V  T  A  T  T  V  V  K  A  L  E  M  P  S  K  A  A  D  I  G  L  F  G  L  R  K  K  L  K  K  V  E  D  E  A  E  E  L  V  K  E  G  F  E  A  A  D  K  G  I  A  A  A  E  K  G  I  E  A  A  E  K  G  L  L  T  A  E  K  G  I  E  A  A  E  E  K  I  E  S  T  V  S  F  G  G  L  A  Q  A  G  A  V  A  G  A  E  F  V  G  V  L  I  A  G  A  V  V  N  G  I  L  G  P  E  P  Q  K  S  *  R  V  Y  C  L  S  Y  N  F  S  L  L  L  F  A  N  *  V  *  S  V  F  S  *  I  Q  S  M  I  N  S  I  S  V  T  I  N  P  V  I  *  Y  V  L  I  N  Y  L  T  C  Q  G  S  Q  I  L  E  D  D  V  *  C  R  I  I  V  V  V  N  N  R  K  H  N  D  S  N  S  W  H  C  K  Y  Y  F  T  F  Y  N  S  A  Y  E  A  I  K  I  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0066K03.2" strand="-"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="30859" stop="30305"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>552</number_coding_nucleotides>
                  <number_encoded_amino_acids>184</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TLLCDCGVKECRLHFDCTESIAMSSTTTSLTVRTYPPRCVLNANTNPPTKQAAVALRGRRQLISLVTATTVVKALEMPSKAADIGLFGLRKKLKKVEDEAEELVKEGFEAADKGIAAAEKGIEAAEKGLLTAEKGIEAAEEKIESTVSFGGLAQAGAVAGAEFVGVLIAGAVVNGILGPEPQKS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="+" PGL_start="33216" PGL_stop="42943"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="33216" e_stop="33552"/>
            <exon e_start="34429" e_stop="34676"/>
            <exon e_start="36281" e_stop="36481"/>
            <exon e_start="37791" e_stop="37881"/>
            <exon e_start="38034" e_stop="38304"/>
            <exon e_start="38385" e_stop="38898"/>
            <exon e_start="39495" e_stop="39514"/>
            <exon e_start="40605" e_stop="40642"/>
            <exon e_start="40824" e_stop="40851"/>
            <exon e_start="41167" e_stop="41288"/>
            <exon e_start="41661" e_stop="41723"/>
            <exon e_start="41909" e_stop="41930"/>
            <exon e_start="42217" e_stop="42261"/>
            <exon e_start="42525" e_stop="42656"/>
            <exon e_start="42719" e_stop="42735"/>
            <exon e_start="42846" e_stop="42943"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.760" acc_prob="0.958" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.838" e_score="1.000"/>
          <exon-intron don_prob="0.908" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.990" acc_prob="0.835" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.608" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.650"/>
          <exon-intron don_prob="0.000" acc_prob="0.996" e_score="0.711"/>
          <exon-intron don_prob="0.413" acc_prob="0.000" e_score="0.571"/>
          <exon-intron don_prob="0.000" acc_prob="0.822" e_score="0.541"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.524"/>
          <exon-intron don_prob="0.863" acc_prob="0.000" e_score="0.727"/>
          <exon-intron don_prob="0.828" acc_prob="0.000" e_score="0.622"/>
          <exon-intron don_prob="0.605" acc_prob="0.000" e_score="0.561"/>
          <exon-intron don_prob="0.671" acc_prob="0.146" e_score="0.647"/>
          <exon-only e_score="0.500"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="33216" e_stop="33552" e_length="337"/>
          </exon>
          <intron i_serial="1" don_prob="0.760" acc_prob="0.958">
            <gDNA_intron_boundary i_start="33553" i_stop="34428" i_length="876"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="34429" e_stop="34676" e_length="248"/>
          </exon>
          <intron i_serial="2" don_prob="0.998" acc_prob="0.838">
            <gDNA_intron_boundary i_start="34677" i_stop="36280" i_length="1604"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="36281" e_stop="36481" e_length="201"/>
          </exon>
          <intron i_serial="3" don_prob="0.908" acc_prob="0.991">
            <gDNA_intron_boundary i_start="36482" i_stop="37790" i_length="1309"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="37791" e_stop="37881" e_length="91"/>
          </exon>
          <intron i_serial="4" don_prob="0.990" acc_prob="0.835">
            <gDNA_intron_boundary i_start="37882" i_stop="38033" i_length="152"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="38034" e_stop="38304" e_length="271"/>
          </exon>
          <intron i_serial="5" don_prob="1.000" acc_prob="0.993">
            <gDNA_intron_boundary i_start="38305" i_stop="38384" i_length="80"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="38385" e_stop="38898" e_length="514"/>
          </exon>
          <intron i_serial="6" don_prob="0.000" acc_prob="0.608">
            <gDNA_intron_boundary i_start="38899" i_stop="39494" i_length="596"/>
          </intron>
          <exon e_serial="7" e_score="0.650">
            <gDNA_exon_boundary e_start="39495" e_stop="39514" e_length="20"/>
          </exon>
          <intron i_serial="7" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="39515" i_stop="40604" i_length="1090"/>
          </intron>
          <exon e_serial="8" e_score="0.711">
            <gDNA_exon_boundary e_start="40605" e_stop="40642" e_length="38"/>
          </exon>
          <intron i_serial="8" don_prob="0.000" acc_prob="0.996">
            <gDNA_intron_boundary i_start="40643" i_stop="40823" i_length="181"/>
          </intron>
          <exon e_serial="9" e_score="0.571">
            <gDNA_exon_boundary e_start="40824" e_stop="40851" e_length="28"/>
          </exon>
          <intron i_serial="9" don_prob="0.413" acc_prob="0.000">
            <gDNA_intron_boundary i_start="40852" i_stop="41166" i_length="315"/>
          </intron>
          <exon e_serial="10" e_score="0.541">
            <gDNA_exon_boundary e_start="41167" e_stop="41288" e_length="122"/>
          </exon>
          <intron i_serial="10" don_prob="0.000" acc_prob="0.822">
            <gDNA_intron_boundary i_start="41289" i_stop="41660" i_length="372"/>
          </intron>
          <exon e_serial="11" e_score="0.524">
            <gDNA_exon_boundary e_start="41661" e_stop="41723" e_length="63"/>
          </exon>
          <intron i_serial="11" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="41724" i_stop="41908" i_length="185"/>
          </intron>
          <exon e_serial="12" e_score="0.727">
            <gDNA_exon_boundary e_start="41909" e_stop="41930" e_length="22"/>
          </exon>
          <intron i_serial="12" don_prob="0.863" acc_prob="0.000">
            <gDNA_intron_boundary i_start="41931" i_stop="42216" i_length="286"/>
          </intron>
          <exon e_serial="13" e_score="0.622">
            <gDNA_exon_boundary e_start="42217" e_stop="42261" e_length="45"/>
          </exon>
          <intron i_serial="13" don_prob="0.828" acc_prob="0.000">
            <gDNA_intron_boundary i_start="42262" i_stop="42524" i_length="263"/>
          </intron>
          <exon e_serial="14" e_score="0.561">
            <gDNA_exon_boundary e_start="42525" e_stop="42656" e_length="132"/>
          </exon>
          <intron i_serial="14" don_prob="0.605" acc_prob="0.000">
            <gDNA_intron_boundary i_start="42657" i_stop="42718" i_length="62"/>
          </intron>
          <exon e_serial="15" e_score="0.647">
            <gDNA_exon_boundary e_start="42719" e_stop="42735" e_length="17"/>
          </exon>
          <intron i_serial="15" don_prob="0.671" acc_prob="0.146">
            <gDNA_intron_boundary i_start="42736" i_stop="42845" i_length="110"/>
          </intron>
          <exon e_serial="16" e_score="0.500">
            <gDNA_exon_boundary e_start="42846" e_stop="42943" e_length="98"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33216" stop="33552"/>
              <exon start="34429" stop="34676"/>
              <exon start="36281" stop="36481"/>
              <exon start="37791" stop="37881"/>
              <exon start="38034" stop="38304"/>
              <exon start="38385" stop="38898"/>
              <exon start="39495" stop="39514"/>
              <exon start="40605" stop="40642"/>
              <exon start="40824" stop="40851"/>
              <exon start="41167" stop="41288"/>
              <exon start="41661" stop="41723"/>
              <exon start="41909" stop="41930"/>
              <exon start="42217" stop="42261"/>
              <exon start="42525" stop="42656"/>
              <exon start="42719" stop="42735"/>
              <exon start="42846" stop="42943"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U316652" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GAGGGAAAATCAAGGGCTTATAAAATTTCCGCTTAGAGTAGCTATTTCTAATCAAAGAGACGATGGCTGAGGAAGCAGTAATTTCAGTAACAAGCCCTACGGCGGAGCAAAACCAGAACTCGGTGAACGCCACCATCGAATCTGGTGTTCAGGGAGGCACAGAATCAACTTGCAACAACAATAATAATAATGCGGAGAGTTCTGCGGTTACTTCTGATGTTAACCGTGAAAAATCTCTGGAGTACGCGGATGAGTTAGTGGTAAAAGGCTCCAAGGCATCTGAAGATGGAGATTATGGAGAAGCCGTAGAATGCTTTAGCCGTGCCCTGGAAATTCG : GGTCGCACATTTTGGTGAACTTGCTCCTGAATGTATCAATGCATATTATAAATATGGGTGTGCTTTGCTGTACAAAGCTCAGGATGAGGCTGATCCTTTGGTTTCTTTGCCAAAAAAGGACAGCGGGTCTCAACAAGATTCTAATAGAGACGGCTCTGTTAAAAGTGTTGTTAGTTGTGAGTCTTCTATTTCAAGCACTGCTGAACCTGGTGGAAGTTCGAATGGAAAGGAAAAAGTAGAAGATGATG : CTGCAGAGGAAAACGAAGATGAAGGAGATGAAGAAGAAAGTGATGACGAGGACTTGGCTGAAGGTGATGAGGATGAAACTGACCTGGATTTAGCCTGGAAACTGTTAGATGTTGCAAGGGCAATTGCTGAAAAGCACGCTGGTGACACAATGGAAAAAGTGGATGTATTATCAGCTTTGGCTGAGGTAGCCTTGGAAAGAG : AGGATATTGAAACTTCCCTTAGTGATTACCTGAAGGCATTATCCATTTTGGAACGCTTGGTTGAACCTGACAGTCGCCATATTGCTGCGCT : CAACTTTAGGATATGCTTATGCCTGGAAATTGGTTCTAAGCATCAGGAAGCCATACCATACTGCCAAAAAGCTATTTTAACTTGCAAGTCGCGGCTGCAGAGACTCACTGAGGAAATAAAGCTTTTGTCAGAATCAACAGAAAGATTAGCTACTACCGATGTAGATCAGATTGCGAGACAGTCTTCCAGTATATCACAGTCTGACTCTGTATCTGCTAAAGAAGCTGAAGTTGAAACGCTCACTGAACTTTCTGCAGAATTGGAGAAGAAG : CTTGAAGATTTGCAGCAGTGTATGTCAAATCCATCATCTATCCTCTCCGATATTTTGGGAATGGTGTCTGCGAAAGCAAGAAGTCTAGAGAATGCTGATGCTTCTGTAGCTGTGAACTCCTCACAGATGGGTGTTGGTACCAGTGGTAGCGGAAGTTTTGACTCTCCAACTGTTTCCACTGCCCACACAAATGGTGCAGCTGGAATAACCCATCTTGGAGTAGTTGGAAGAGGAGTCAAGAGGGTGCATCTAAACACAACCACAGAATCTAGTCCAGCGAAAAAACCTGCATCTGAGCAGCCGTCAGATAATGGAGATGGCACTGCCTCTTAAAGCATGTATTGTTGGTGCTTCAATTAAGTTACGGTTAACATTTCAATTTAGCTTATTGATAACATTGGTGGATTACCTTAGTTTGTTGCATTCTCTGTTGGTTAGCTGGGAAGTGTGTTGCCACAGATCGCATCAGTTTATTTCCTTAAATTAATTACCTTGTATGCATGTTGACTATTCA : GGAAAATAAAAGACAATTCA : TAATCCTTAGATTCGAAAAACCATAATATTAACTAGAT : GTACTCAACGAGGCGATGATGCCGTTGG : TGGCCTTTCTGCCTCCATTTCTCAAATTCACTTTTGAATTTGAATATTATAGGTTCAAAATTAGAAATTTTAGTATTTGATTTATTACATTGGTAATCTATTTATCTAATGTATATAAATTA : GTAAGTGCAGAAATGTATTAAGGTGAGATGAGTTAAACAATGAATCAGATACTAGCTTAATTA : GTAAGATCAAATAATTAAAAGA : AAAATCAAAATTAATCGATGTTTTAATACAAATATTGAATATAAG : AACTCCATAATCTTGATTTGAAATCGGTTGTTGCATTAGTCTTCTTTTTAACTTTTTGACTCCATTGACTTATTACTATCAAACGTGTGTGGCGAAGTGGATGAGATTGATCTTTCTTCAAGTAGAGATCTC : CCGTCCAATGAAACAAA : GGTAGTGTTGATGCAGAAAAGCAATAACGATAGTTGGCAAGCAAAGTGTGTTTTTGTTGCTTATAAACAGAGAAAAAAGGGAACAATTTAATGATGAC</gDNA_template>
            <first_frame> E  G  K  S  R  A  Y  K  I  S  A  *  S  S  Y  F  *  S  K  R  R  W  L  R  K  Q  *  F  Q  *  Q  A  L  R  R  S  K  T  R  T  R  *  T  P  P  S  N  L  V  F  R  E  A  Q  N  Q  L  A  T  T  I  I  I  M  R  R  V  L  R  L  L  L  M  L  T  V  K  N  L  W  S  T  R  M  S  *  W  *  K  A  P  R  H  L  K  M  E  I  M  E  K  P  *  N  A  L  A  V  P  W  K  F   : G  S  H  I  L  V  N  L  L  L  N  V  S  M  H  I  I  N  M  G  V  L  C  C  T  K  L  R  M  R  L  I  L  W  F  L  C  Q  K  R  T  A  G  L  N  K  I  L  I  E  T  A  L  L  K  V  L  L  V  V  S  L  L  F  Q  A  L  L  N  L  V  E  V  R  M  E  R  K  K  *  K  M  M  :  L  Q  R  K  T  K  M  K  E  M  K  K  K  V  M  T  R  T  W  L  K  V  M  R  M  K  L  T  W  I  *  P  G  N  C  *  M  L  Q  G  Q  L  L  K  S  T  L  V  T  Q  W  K  K  W  M  Y  Y  Q  L  W  L  R  *  P  W  K  E  :  R  I  L  K  L  P  L  V  I  T  *  R  H  Y  P  F  W  N  A  W  L  N  L  T  V  A  I  L  L  R   : S  T  L  G  Y  A  Y  A  W  K  L  V  L  S  I  R  K  P  Y  H  T  A  K  K  L  F  *  L  A  S  R  G  C  R  D  S  L  R  K  *  S  F  C  Q  N  Q  Q  K  D  *  L  L  P  M  *  I  R  L  R  D  S  L  P  V  Y  H  S  L  T  L  Y  L  L  K  K  L  K  L  K  R  S  L  N  F  L  Q  N  W  R  R  S :   L  K  I  C  S  S  V  C  Q  I  H  H  L  S  S  P  I  F  W  E  W  C  L  R  K  Q  E  V  *  R  M  L  M  L  L  *  L  *  T  P  H  R  W  V  L  V  P  V  V  A  E  V  L  T  L  Q  L  F  P  L  P  T  Q  M  V  Q  L  E  *  P  I  L  E  *  L  E  E  E  S  R  G  C  I  *  T  Q  P  Q  N  L  V  Q  R  K  N  L  H  L  S  S  R  Q  I  M  E  M  A  L  P  L  K  A  C  I  V  G  A  S  I  K  L  R  L  T  F  Q  F  S  L  L  I  T  L  V  D  Y  L  S  L  L  H  S  L  L  V  S  W  E  V  C  C  H  R  S  H  Q  F  I  S  L  N  *  L  P  C  M  H  V  D  Y  S  :  G  K  *  K  T  I  H :   N  P  *  I  R  K  T  I  I  L  T  R   : C  T  Q  R  G  D  D  A  V  G :   G  L  S  A  S  I  S  Q  I  H  F  *  I  *  I  L  *  V  Q  N  *  K  F  *  Y  L  I  Y  Y  I  G  N  L  F  I  *  C  I  *  I   : S  K  C  R  N  V  L  R  *  D  E  L  N  N  E  S  D  T  S  L  I   : S  K  I  K  *  L  K  E :   K  S  K  L  I  D  V  L  I  Q  I  L  N  I  R :   T  P  *  S  *  F  E  I  G  C  C  I  S  L  L  F  N  F  L  T  P  L  T  Y  Y  Y  Q  T  C  V  A  K  W  M  R  L  I  F  L  Q  V  E  I  S :   R  P  M  K  Q   : R  *  C  *  C  R  K  A  I  T  I  V  G  K  Q  S  V  F  L  L  L  I  N  R  E  K  R  E  Q  F  N  D  D </first_frame>
            <second_frame>  R  E  N  Q  G  L  I  K  F  P  L  R  V  A  I  S  N  Q  R  D  D  G  *  G  S  S  N  F  S  N  K  P  Y  G  G  A  K  P  E  L  G  E  R  H  H  R  I  W  C  S  G  R  H  R  I  N  L  Q  Q  Q  *  *  *  C  G  E  F  C  G  Y  F  *  C  *  P  *  K  I  S  G  V  R  G  *  V  S  G  K  R  L  Q  G  I  *  R  W  R  L  W  R  S  R  R  M  L  *  P  C  P  G  N  S  :  G  R  T  F  W  *  T  C  S  *  M  Y  Q  C  I  L  *  I  W  V  C  F  A  V  Q  S  S  G  *  G  *  S  F  G  F  F  A  K  K  G  Q  R  V  S  T  R  F  *  *  R  R  L  C  *  K  C  C  *  L  *  V  F  Y  F  K  H  C  *  T  W  W  K  F  E  W  K  G  K  S  R  R  *  C :   C  R  G  K  R  R  *  R  R  *  R  R  K  *  *  R  G  L  G  *  R  *  *  G  *  N  *  P  G  F  S  L  E  T  V  R  C  C  K  G  N  C  *  K  A  R  W  *  H  N  G  K  S  G  C  I  I  S  F  G  *  G  S  L  G  K  R :   G  Y  *  N  F  P  *  *  L  P  E  G  I  I  H  F  G  T  L  G  *  T  *  Q  S  P  Y  C  C  A  :  Q  L  *  D  M  L  M  P  G  N  W  F  *  A  S  G  S  H  T  I  L  P  K  S  Y  F  N  L  Q  V  A  A  A  E  T  H  *  G  N  K  A  F  V  R  I  N  R  K  I  S  Y  Y  R  C  R  S  D  C  E  T  V  F  Q  Y  I  T  V  *  L  C  I  C  *  R  S  *  S  *  N  A  H  *  T  F  C  R  I  G  E  E   : A  *  R  F  A  A  V  Y  V  K  S  I  I  Y  P  L  R  Y  F  G  N  G  V  C  E  S  K  K  S  R  E  C  *  C  F  C  S  C  E  L  L  T  D  G  C  W  Y  Q  W  *  R  K  F  *  L  S  N  C  F  H  C  P  H  K  W  C  S  W  N  N  P  S  W  S  S  W  K  R  S  Q  E  G  A  S  K  H  N  H  R  I  *  S  S  E  K  T  C  I  *  A  A  V  R  *  W  R  W  H  C  L  L  K  H  V  L  L  V  L  Q  L  S  Y  G  *  H  F  N  L  A  Y  *  *  H  W  W  I  T  L  V  C  C  I  L  C  W  L  A  G  K  C  V  A  T  D  R  I  S  L  F  P  *  I  N  Y  L  V  C  M  L  T  I  Q :   E  N  K  R  Q  F   : I  I  L  R  F  E  K  P  *  Y  *  L  D  :  V  L  N  E  A  M  M  P  L   : V  A  F  L  P  P  F  L  K  F  T  F  E  F  E  Y  Y  R  F  K  I  R  N  F  S  I  *  F  I  T  L  V  I  Y  L  S  N  V  Y  K  L  :  V  S  A  E  M  Y  *  G  E  M  S  *  T  M  N  Q  I  L  A  *  L  :  V  R  S  N  N  *  K   : K  N  Q  N  *  S  M  F  *  Y  K  Y  *  I  *   : E  L  H  N  L  D  L  K  S  V  V  A  L  V  F  F  L  T  F  *  L  H  *  L  I  T  I  K  R  V  W  R  S  G  *  D  *  S  F  F  K  *  R  S   : P  V  Q  *  N  K  :  G  S  V  D  A  E  K  Q  *  R  *  L  A  S  K  V  C  F  C  C  L  *  T  E  K  K  G  N  N  L  M  M   </second_frame>
            <third_frame>   G  K  I  K  G  L  *  N  F  R  L  E  *  L  F  L  I  K  E  T  M  A  E  E  A  V  I  S  V  T  S  P  T  A  E  Q  N  Q  N  S  V  N  A  T  I  E  S  G  V  Q  G  G  T  E  S  T  C  N  N  N  N  N  N  A  E  S  S  A  V  T  S  D  V  N  R  E  K  S  L  E  Y  A  D  E  L  V  V  K  G  S  K  A  S  E  D  G  D  Y  G  E  A  V  E  C  F  S  R  A  L  E  I  R :   V  A  H  F  G  E  L  A  P  E  C  I  N  A  Y  Y  K  Y  G  C  A  L  L  Y  K  A  Q  D  E  A  D  P  L  V  S  L  P  K  K  D  S  G  S  Q  Q  D  S  N  R  D  G  S  V  K  S  V  V  S  C  E  S  S  I  S  S  T  A  E  P  G  G  S  S  N  G  K  E  K  V  E  D  D   : A  A  E  E  N  E  D  E  G  D  E  E  E  S  D  D  E  D  L  A  E  G  D  E  D  E  T  D  L  D  L  A  W  K  L  L  D  V  A  R  A  I  A  E  K  H  A  G  D  T  M  E  K  V  D  V  L  S  A  L  A  E  V  A  L  E  R   : E  D  I  E  T  S  L  S  D  Y  L  K  A  L  S  I  L  E  R  L  V  E  P  D  S  R  H  I  A  A  L :   N  F  R  I  C  L  C  L  E  I  G  S  K  H  Q  E  A  I  P  Y  C  Q  K  A  I  L  T  C  K  S  R  L  Q  R  L  T  E  E  I  K  L  L  S  E  S  T  E  R  L  A  T  T  D  V  D  Q  I  A  R  Q  S  S  S  I  S  Q  S  D  S  V  S  A  K  E  A  E  V  E  T  L  T  E  L  S  A  E  L  E  K  K  :  L  E  D  L  Q  Q  C  M  S  N  P  S  S  I  L  S  D  I  L  G  M  V  S  A  K  A  R  S  L  E  N  A  D  A  S  V  A  V  N  S  S  Q  M  G  V  G  T  S  G  S  G  S  F  D  S  P  T  V  S  T  A  H  T  N  G  A  A  G  I  T  H  L  G  V  V  G  R  G  V  K  R  V  H  L  N  T  T  T  E  S  S  P  A  K  K  P  A  S  E  Q  P  S  D  N  G  D  G  T  A  S  *  S  M  Y  C  W  C  F  N  *  V  T  V  N  I  S  I  *  L  I  D  N  I  G  G  L  P  *  F  V  A  F  S  V  G  *  L  G  S  V  L  P  Q  I  A  S  V  Y  F  L  K  L  I  T  L  Y  A  C  *  L  F   : R  K  I  K  D  N  S  :  *  S  L  D  S  K  N  H  N  I  N  *  M :   Y  S  T  R  R  *  C  R  W  :  W  P  F  C  L  H  F  S  N  S  L  L  N  L  N  I  I  G  S  K  L  E  I  L  V  F  D  L  L  H  W  *  S  I  Y  L  M  Y  I  N  * :   *  V  Q  K  C  I  K  V  R  *  V  K  Q  *  I  R  Y  *  L  N  * :   *  D  Q  I  I  K  R  :  K  I  K  I  N  R  C  F  N  T  N  I  E  Y  K  :  N  S  I  I  L  I  *  N  R  L  L  H  *  S  S  F  *  L  F  D  S  I  D  L  L  L  S  N  V  C  G  E  V  D  E  I  D  L  S  S  S  R  D  L  :  P  S  N  E  T  K :   V  V  L  M  Q  K  S  N  N  D  S  W  Q  A  K  C  V  F  V  A  Y  K  Q  R  K  K  G  T  I  *  *  *  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0066K03.2" strand="+"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="33257" stop="33552"/>
                    <exon start="34429" stop="34676"/>
                    <exon start="36281" stop="36481"/>
                    <exon start="37791" stop="37881"/>
                    <exon start="38034" stop="38304"/>
                    <exon start="38385" stop="38717"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1437</number_coding_nucleotides>
                  <number_encoded_amino_acids>479</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LFLIKETMAEEAVISVTSPTAEQNQNSVNATIESGVQGGTESTCNNNNNNAESSAVTSDVNREKSLEYADELVVKGSKASEDGDYGEAVECFSRALEIRVAHFGELAPECINAYYKYGCALLYKAQDEADPLVSLPKKDSGSQQDSNRDGSVKSVVSCESSISSTAEPGGSSNGKEKVEDDAAEENEDEGDEEESDDEDLAEGDEDETDLDLAWKLLDVARAIAEKHAGDTMEKVDVLSALAEVALEREDIETSLSDYLKALSILERLVEPDSRHIAALNFRICLCLEIGSKHQEAIPYCQKAILTCKSRLQRLTEEIKLLSESTERLATTDVDQIARQSSSISQSDSVSAKEAEVETLTELSAELEKKLEDLQQCMSNPSSILSDILGMVSAKARSLENADASVAVNSSQMGVGTSGSGSFDSPTVSTAHTNGAAGITHLGVVGRGVKRVHLNTTTESSPAKKPASEQPSDNGDGTAS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="+" PGL_start="44369" PGL_stop="45031"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="44369" e_stop="44840"/>
            <exon e_start="44929" e_stop="45031"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="44369" e_stop="44840" e_length="472"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="1.000">
            <gDNA_intron_boundary i_start="44841" i_stop="44928" i_length="88"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="44929" e_stop="45031" e_length="103"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44369" stop="44840"/>
              <exon start="44929" stop="45031"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U326218" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TACCAACCTTCCTACAGAGATTAGCTCAAGAACTTCAACAACCACAAGGATTCTCTTCGGCTTATTGAGAACAGCAAACATACTAAATGCTTCGGAAGCTGCTCGAGCTGCACTAGAGCGGAAAATCGGATCTCAACTGGAGCACGCCACATTAGACGATCTTCTCATTCCAAGCTACTCTTATCTGAATGAAACGTTATACGATGTCGCTTGTGTGGAGAGAATATTAGGATATTTTTTAACCGGATTGGAAGAGAGGTCTACCGCTAGAATTCAAGGCGAAGAAGAAAACATCAGTGTCAGATCCACGGCGCTAATGTTAGTCGGCAAGTTAATTGACGGTTACTTATCAGAAATAGCCTCTGATAATAATTTACTACCGGAAAAATTCTGTGAATTAGCTGTTGCATTGCCGGACCAAGCAAGACTCTTTGATGATGGCCTTTACAGAGCTGTCGATGTGTATCTCAAG : GCGCATCCATGGATATCGGAAGCGGAGAGGGAGCAAATATGCGGAGTTATGGATTGCCAAAAGTTAACACTAGAGGCGTGTACACACGCAGCTCAGAATGAAC</gDNA_template>
            <first_frame> Y  Q  P  S  Y  R  D  *  L  K  N  F  N  N  H  K  D  S  L  R  L  I  E  N  S  K  H  T  K  C  F  G  S  C  S  S  C  T  R  A  E  N  R  I  S  T  G  A  R  H  I  R  R  S  S  H  S  K  L  L  L  S  E  *  N  V  I  R  C  R  L  C  G  E  N  I  R  I  F  F  N  R  I  G  R  E  V  Y  R  *  N  S  R  R  R  R  K  H  Q  C  Q  I  H  G  A  N  V  S  R  Q  V  N  *  R  L  L  I  R  N  S  L  *  *  *  F  T  T  G  K  I  L  *  I  S  C  C  I  A  G  P  S  K  T  L  *  *  W  P  L  Q  S  C  R  C  V  S  Q   : G  A  S  M  D  I  G  S  G  E  G  A  N  M  R  S  Y  G  L  P  K  V  N  T  R  G  V  Y  T  R  S  S  E  *   </first_frame>
            <second_frame>  T  N  L  P  T  E  I  S  S  R  T  S  T  T  T  R  I  L  F  G  L  L  R  T  A  N  I  L  N  A  S  E  A  A  R  A  A  L  E  R  K  I  G  S  Q  L  E  H  A  T  L  D  D  L  L  I  P  S  Y  S  Y  L  N  E  T  L  Y  D  V  A  C  V  E  R  I  L  G  Y  F  L  T  G  L  E  E  R  S  T  A  R  I  Q  G  E  E  E  N  I  S  V  R  S  T  A  L  M  L  V  G  K  L  I  D  G  Y  L  S  E  I  A  S  D  N  N  L  L  P  E  K  F  C  E  L  A  V  A  L  P  D  Q  A  R  L  F  D  D  G  L  Y  R  A  V  D  V  Y  L  K  :  A  H  P  W  I  S  E  A  E  R  E  Q  I  C  G  V  M  D  C  Q  K  L  T  L  E  A  C  T  H  A  A  Q  N  E  </second_frame>
            <third_frame>   P  T  F  L  Q  R  L  A  Q  E  L  Q  Q  P  Q  G  F  S  S  A  Y  *  E  Q  Q  T  Y  *  M  L  R  K  L  L  E  L  H  *  S  G  K  S  D  L  N  W  S  T  P  H  *  T  I  F  S  F  Q  A  T  L  I  *  M  K  R  Y  T  M  S  L  V  W  R  E  Y  *  D  I  F  *  P  D  W  K  R  G  L  P  L  E  F  K  A  K  K  K  T  S  V  S  D  P  R  R  *  C  *  S  A  S  *  L  T  V  T  Y  Q  K  *  P  L  I  I  I  Y  Y  R  K  N  S  V  N  *  L  L  H  C  R  T  K  Q  D  S  L  M  M  A  F  T  E  L  S  M  C  I  S  R :   R  I  H  G  Y  R  K  R  R  G  S  K  Y  A  E  L  W  I  A  K  S  *  H  *  R  R  V  H  T  Q  L  R  M  N </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0066K03.2" strand="+"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="44370" stop="44840"/>
                    <exon start="44929" stop="45030"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>573</number_coding_nucleotides>
                  <number_encoded_amino_acids>191</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TNLPTEISSRTSTTTRILFGLLRTANILNASEAARAALERKIGSQLEHATLDDLLIPSYSYLNETLYDVACVERILGYFLTGLEERSTARIQGEEENISVRSTALMLVGKLIDGYLSEIASDNNLLPEKFCELAVALPDQARLFDDGLYRAVDVYLKAHPWISEAEREQICGVMDCQKLTLEACTHAAQNE</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="-" PGL_start="53337" PGL_stop="50346"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="53337" e_stop="53283"/>
            <exon e_start="53172" e_stop="53074"/>
            <exon e_start="52984" e_stop="52911"/>
            <exon e_start="52807" e_stop="52573"/>
            <exon e_start="50844" e_stop="50740"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.925" e_score="1.000"/>
          <exon-intron don_prob="0.161" acc_prob="0.668" e_score="1.000"/>
          <exon-intron don_prob="0.577" acc_prob="0.765" e_score="1.000"/>
          <exon-intron don_prob="0.599" acc_prob="0.765" e_score="1.000"/>
          <exon-only e_score="0.981"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="53337" e_stop="53283" e_length="55"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.925">
            <gDNA_intron_boundary i_start="53282" i_stop="53173" i_length="110"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="53172" e_stop="53074" e_length="99"/>
          </exon>
          <intron i_serial="2" don_prob="0.161" acc_prob="0.668">
            <gDNA_intron_boundary i_start="53073" i_stop="52985" i_length="89"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="52984" e_stop="52911" e_length="74"/>
          </exon>
          <intron i_serial="3" don_prob="0.577" acc_prob="0.765">
            <gDNA_intron_boundary i_start="52910" i_stop="52808" i_length="103"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="52807" e_stop="52573" e_length="235"/>
          </exon>
          <intron i_serial="4" don_prob="0.599" acc_prob="0.765">
            <gDNA_intron_boundary i_start="52572" i_stop="50845" i_length="1728"/>
          </intron>
          <exon e_serial="5" e_score="0.981">
            <gDNA_exon_boundary e_start="50844" e_stop="50740" e_length="105"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53337" stop="53283"/>
              <exon start="53172" stop="53074"/>
              <exon start="52984" stop="52911"/>
              <exon start="52807" stop="52573"/>
              <exon start="50844" stop="50740"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U315689" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GTTCGTTGCACAGAAGCCTGATACATGATGGATCATCTTTGTTTATTCCAGATAA : TGGGTTCGGGTGTCATCTGAGTTCCCTTAACAAATTGAATGCAAGTGATGGTTCATATAAACTCTCAGGATATATCTCTGGTATGTTCACACAGTGAAG : GTCTTTCAATATTTTTGTATGAACTTATTTCAGTATATTTTCCTGAACAAAGAAAATGGAAACTAATCGTTGGG : ATATCAATTCAAGATTTATTTCCAAAAGACCAACACATAAATTACTTAATAACATAGAGATGAGTTTTGGTAGTGCTTCTGACATTGAGTAGCGAAATAGATCTCAGATTTTTTTTTGAGACAGTAACAACAAAATAGATCTCAGATTTATCCACTGTGTTTTTTGAACCTGAACTGCTCAAGATCTTTACATGATTTGACTTTGGAGCCTTCAATGACCTCTGTGGAACTTAAG : GTCCTTCTGAATTCTATTATGATGGAGATGATTTGACACATGCAATCTCATGGTGAAGAGATTCTTAAGAATTATTTGATACCACGAGCTATGCTCTCCTCTAGG</gDNA_template>
            <first_frame> V  R  C  T  E  A  *  Y  M  M  D  H  L  C  L  F  Q  I   : M  G  S  G  V  I  *  V  P  L  T  N  *  M  Q  V  M  V  H  I  N  S  Q  D  I  S  L  V  C  S  H  S  E   : G  L  S  I  F  L  Y  E  L  I  S  V  Y  F  P  E  Q  R  K  W  K  L  I  V  G  :  I  S  I  Q  D  L  F  P  K  D  Q  H  I  N  Y  L  I  T  *  R  *  V  L  V  V  L  L  T  L  S  S  E  I  D  L  R  F  F  F  E  T  V  T  T  K  *  I  S  D  L  S  T  V  F  F  E  P  E  L  L  K  I  F  T  *  F  D  F  G  A  F  N  D  L  C  G  T  *   : G  P  S  E  F  Y  Y  D  G  D  D  L  T  H  A  I  S  W  *  R  D  S  *  E  L  F  D  T  T  S  Y  A  L  L  *  </first_frame>
            <second_frame>  F  V  A  Q  K  P  D  T  *  W  I  I  F  V  Y  S  R  *  :  W  V  R  V  S  S  E  F  P  *  Q  I  E  C  K  *  W  F  I  *  T  L  R  I  Y  L  W  Y  V  H  T  V  K  :  V  F  Q  Y  F  C  M  N  L  F  Q  Y  I  F  L  N  K  E  N  G  N  *  S  L  G :   Y  Q  F  K  I  Y  F  Q  K  T  N  T  *  I  T  *  *  H  R  D  E  F  W  *  C  F  *  H  *  V  A  K  *  I  S  D  F  F  L  R  Q  *  Q  Q  N  R  S  Q  I  Y  P  L  C  F  L  N  L  N  C  S  R  S  L  H  D  L  T  L  E  P  S  M  T  S  V  E  L  K  :  V  L  L  N  S  I  M  M  E  M  I  *  H  M  Q  S  H  G  E  E  I  L  K  N  Y  L  I  P  R  A  M  L  S  S  R </second_frame>
            <third_frame>   S  L  H  R  S  L  I  H  D  G  S  S  L  F  I  P  D  N :   G  F  G  C  H  L  S  S  L  N  K  L  N  A  S  D  G  S  Y  K  L  S  G  Y  I  S  G  M  F  T  Q  *  R :   S  F  N  I  F  V  *  T  Y  F  S  I  F  S  *  T  K  K  M  E  T  N  R  W   : D  I  N  S  R  F  I  S  K  R  P  T  H  K  L  L  N  N  I  E  M  S  F  G  S  A  S  D  I  E  *  R  N  R  S  Q  I  F  F  *  D  S  N  N  K  I  D  L  R  F  I  H  C  V  F  *  T  *  T  A  Q  D  L  Y  M  I  *  L  W  S  L  Q  *  P  L  W  N  L  R :   S  F  *  I  L  L  *  W  R  *  F  D  T  C  N  L  M  V  K  R  F  L  R  I  I  *  Y  H  E  L  C  S  P  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02SLm0066K03.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="52983" e_stop="52911"/>
            <exon e_start="51035" e_stop="50535"/>
            <exon e_start="50444" e_stop="50346"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.577" acc_prob="0.941" e_score="1.000"/>
          <exon-intron don_prob="0.989" acc_prob="0.000" e_score="0.998"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="52983" e_stop="52911" e_length="73"/>
          </exon>
          <intron i_serial="1" don_prob="0.577" acc_prob="0.941">
            <gDNA_intron_boundary i_start="52910" i_stop="51036" i_length="1875"/>
          </intron>
          <exon e_serial="2" e_score="0.998">
            <gDNA_exon_boundary e_start="51035" e_stop="50535" e_length="501"/>
          </exon>
          <intron i_serial="2" don_prob="0.989" acc_prob="0.000">
            <gDNA_intron_boundary i_start="50534" i_stop="50445" i_length="90"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="50444" e_stop="50346" e_length="99"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52983" stop="52911"/>
              <exon start="51035" stop="50535"/>
              <exon start="50444" stop="50346"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U315690" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCTTTCAATATTTTTGTATGAACTTATTTCAGTATATTTTCCTGAACAAAGAAAATGGAAACTAATCGTTGGG : AGGGTTATTTCCTGTTAAACATGAGGCTGCTGTCACATATGATTTTGGAAACATCGAACGTAATCTCTTGGTCCCTGCCATAAATAATTTGGAGAAAGAGGACTGCAAAGTGTGATCTCAATTTTATGCTCTTTCTAGTGAGAAGATGTCCAGAATAGAGGAACTTGTTACATGGGATGTTTATGGTTCAGGTCCTTCTGAATTCTATTATGATGGAGATGATTTGACACATGCAATCTCATGGTGAAGAGATTCTTAAGAATTATTTGATACCACGAGCTATGCTCTCCTCTAGGGTGGATGGTGACTTACATAAATGGATTGATGCTGGAAGTCGAGGTAAAACAGATGAGCTTATTAGGAAGAAGAAGAGTACAAAAAGTCATTCAGCTCCTCCATTTTACCAAGGCAAGAAGAAGTTCTTTGCCACGGCTGAGTCTTCAAGAAAGGCAGCAGGAAATAAGAATATTATGACTGTTCATGATGTGCCACTCATGCCAG : CTGTAAGGAGACTGCATCATTCTGTAGAAGCTATCTGCTTGGAGCTTCACGACAGTCATCCCATCAATGTGATCAATCTTCCACCCCAAGTTGCGGTGA</gDNA_template>
            <first_frame> S  F  N  I  F  V  *  T  Y  F  S  I  F  S  *  T  K  K  M  E  T  N  R  W   : E  G  Y  F  L  L  N  M  R  L  L  S  H  M  I  L  E  T  S  N  V  I  S  W  S  L  P  *  I  I  W  R  K  R  T  A  K  C  D  L  N  F  M  L  F  L  V  R  R  C  P  E  *  R  N  L  L  H  G  M  F  M  V  Q  V  L  L  N  S  I  M  M  E  M  I  *  H  M  Q  S  H  G  E  E  I  L  K  N  Y  L  I  P  R  A  M  L  S  S  R  V  D  G  D  L  H  K  W  I  D  A  G  S  R  G  K  T  D  E  L  I  R  K  K  K  S  T  K  S  H  S  A  P  P  F  Y  Q  G  K  K  K  F  F  A  T  A  E  S  S  R  K  A  A  G  N  K  N  I  M  T  V  H  D  V  P  L  M  P   : A  V  R  R  L  H  H  S  V  E  A  I  C  L  E  L  H  D  S  H  P  I  N  V  I  N  L  P  P  Q  V  A  V  </first_frame>
            <second_frame>  L  S  I  F  L  Y  E  L  I  S  V  Y  F  P  E  Q  R  K  W  K  L  I  V  G  :  R  V  I  S  C  *  T  *  G  C  C  H  I  *  F  W  K  H  R  T  *  S  L  G  P  C  H  K  *  F  G  E  R  G  L  Q  S  V  I  S  I  L  C  S  F  *  *  E  D  V  Q  N  R  G  T  C  Y  M  G  C  L  W  F  R  S  F  *  I  L  L  *  W  R  *  F  D  T  C  N  L  M  V  K  R  F  L  R  I  I  *  Y  H  E  L  C  S  P  L  G  W  M  V  T  Y  I  N  G  L  M  L  E  V  E  V  K  Q  M  S  L  L  G  R  R  R  V  Q  K  V  I  Q  L  L  H  F  T  K  A  R  R  S  S  L  P  R  L  S  L  Q  E  R  Q  Q  E  I  R  I  L  *  L  F  M  M  C  H  S  C  Q  :  L  *  G  D  C  I  I  L  *  K  L  S  A  W  S  F  T  T  V  I  P  S  M  *  S  I  F  H  P  K  L  R  * </second_frame>
            <third_frame>   F  Q  Y  F  C  M  N  L  F  Q  Y  I  F  L  N  K  E  N  G  N  *  S  L  G :   G  L  F  P  V  K  H  E  A  A  V  T  Y  D  F  G  N  I  E  R  N  L  L  V  P  A  I  N  N  L  E  K  E  D  C  K  V  *  S  Q  F  Y  A  L  S  S  E  K  M  S  R  I  E  E  L  V  T  W  D  V  Y  G  S  G  P  S  E  F  Y  Y  D  G  D  D  L  T  H  A  I  S  W  *  R  D  S  *  E  L  F  D  T  T  S  Y  A  L  L  *  G  G  W  *  L  T  *  M  D  *  C  W  K  S  R  *  N  R  *  A  Y  *  E  E  E  E  Y  K  K  S  F  S  S  S  I  L  P  R  Q  E  E  V  L  C  H  G  *  V  F  K  K  G  S  R  K  *  E  Y  Y  D  C  S  *  C  A  T  H  A  S :   C  K  E  T  A  S  F  C  R  S  Y  L  L  G  A  S  R  Q  S  S  H  Q  C  D  Q  S  S  T  P  S  C  G   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0066K03.2" strand="-"/>
                <serials PGL_serial="8" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="50808" stop="50535"/>
                    <exon start="50444" stop="50347"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>372</number_coding_nucleotides>
                  <number_encoded_amino_acids>124</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>HMQSHGEEILKNYLIPRAMLSSRVDGDLHKWIDAGSRGKTDELIRKKKSTKSHSAPPFYQGKKKFFATAESSRKAAGNKNIMTVHDVPLMPAVRRLHHSVEAICLELHDSHPINVINLPPQVAV</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="53272" e_stop="53074"/>
            <exon e_start="52984" e_stop="52911"/>
            <exon e_start="52807" e_stop="52573"/>
            <exon e_start="51035" e_stop="50732"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.161" acc_prob="0.668" e_score="1.000"/>
          <exon-intron don_prob="0.577" acc_prob="0.765" e_score="1.000"/>
          <exon-intron don_prob="0.599" acc_prob="0.941" e_score="1.000"/>
          <exon-only e_score="0.990"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="53272" e_stop="53074" e_length="199"/>
          </exon>
          <intron i_serial="1" don_prob="0.161" acc_prob="0.668">
            <gDNA_intron_boundary i_start="53073" i_stop="52985" i_length="89"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="52984" e_stop="52911" e_length="74"/>
          </exon>
          <intron i_serial="2" don_prob="0.577" acc_prob="0.765">
            <gDNA_intron_boundary i_start="52910" i_stop="52808" i_length="103"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="52807" e_stop="52573" e_length="235"/>
          </exon>
          <intron i_serial="3" don_prob="0.599" acc_prob="0.941">
            <gDNA_intron_boundary i_start="52572" i_stop="51036" i_length="1537"/>
          </intron>
          <exon e_serial="4" e_score="0.990">
            <gDNA_exon_boundary e_start="51035" e_stop="50732" e_length="304"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53272" stop="53074"/>
              <exon start="52984" stop="52911"/>
              <exon start="52807" stop="52573"/>
              <exon start="51035" stop="50732"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U315688" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTTCCTGTCTTATTCTCTTCAGATTTTGTTCATTTGCACGCAATGAAGATGACCTTCTTTGCACACGTGCTTGTCCTTCTCTGTTTCTGCTGTTGTCCAGTGGGTTCGGGTGTCATCTGAGTTCCCTTAACAAATTGAATGCAAGTGATGGTTCATATAAACTCTCAGGATATATCTCTGGTATGTTCACACAGTGAAG : GTCTTTCAATATTTTTGTATGAACTTATTTCAGTATATTTTCCTGAACAAAGAAAATGGAAACTAATCGTTGGG : ATATCAATTCAAGATTTATTTCCAAAAGACCAACACATAAATTACTTAATAACATAGAGATGAGTTTTGGTAGTGCTTCTGACATTGAGTAGCGAAATAGATCTCAGATTTTTTTTTGAGACAGTAACAACAAAATAGATCTCAGATTTATCCACTGTGTTTTTTGAACCTGAACTGCTCAAGATCTTTACATGATTTGACTTTGGAGCCTTCAATGACCTCTGTGGAACTTAAG : AGGGTTATTTCCTGTTAAACATGAGGCTGCTGTCACATATGATTTTGGAAACATCGAACGTAATCTCTTGGTCCCTGCCATAAATAATTTGGAGAAAGAGGACTGCAAAGTGTGATCTCAATTTTATGCTCTTTCTAGTGAGAAGATGTCCAGAATAGAGGAACTTGTTACATGGGATGTTTATGGTTCAGGTCCTTCTGAATTCTATTATGATGGAGATGATTTGACACATGCAATCTCATGGTGAAGAGATTCTTAAGAATTATTTGATACCACGAGCTATGCTCTCCTCTAGGGTGGATGG</gDNA_template>
            <first_frame> F  P  V  L  F  S  S  D  F  V  H  L  H  A  M  K  M  T  F  F  A  H  V  L  V  L  L  C  F  C  C  C  P  V  G  S  G  V  I  *  V  P  L  T  N  *  M  Q  V  M  V  H  I  N  S  Q  D  I  S  L  V  C  S  H  S  E   : G  L  S  I  F  L  Y  E  L  I  S  V  Y  F  P  E  Q  R  K  W  K  L  I  V  G  :  I  S  I  Q  D  L  F  P  K  D  Q  H  I  N  Y  L  I  T  *  R  *  V  L  V  V  L  L  T  L  S  S  E  I  D  L  R  F  F  F  E  T  V  T  T  K  *  I  S  D  L  S  T  V  F  F  E  P  E  L  L  K  I  F  T  *  F  D  F  G  A  F  N  D  L  C  G  T  *   : E  G  Y  F  L  L  N  M  R  L  L  S  H  M  I  L  E  T  S  N  V  I  S  W  S  L  P  *  I  I  W  R  K  R  T  A  K  C  D  L  N  F  M  L  F  L  V  R  R  C  P  E  *  R  N  L  L  H  G  M  F  M  V  Q  V  L  L  N  S  I  M  M  E  M  I  *  H  M  Q  S  H  G  E  E  I  L  K  N  Y  L  I  P  R  A  M  L  S  S  R  V  D   </first_frame>
            <second_frame>  F  L  S  Y  S  L  Q  I  L  F  I  C  T  Q  *  R  *  P  S  L  H  T  C  L  S  F  S  V  S  A  V  V  Q  W  V  R  V  S  S  E  F  P  *  Q  I  E  C  K  *  W  F  I  *  T  L  R  I  Y  L  W  Y  V  H  T  V  K  :  V  F  Q  Y  F  C  M  N  L  F  Q  Y  I  F  L  N  K  E  N  G  N  *  S  L  G :   Y  Q  F  K  I  Y  F  Q  K  T  N  T  *  I  T  *  *  H  R  D  E  F  W  *  C  F  *  H  *  V  A  K  *  I  S  D  F  F  L  R  Q  *  Q  Q  N  R  S  Q  I  Y  P  L  C  F  L  N  L  N  C  S  R  S  L  H  D  L  T  L  E  P  S  M  T  S  V  E  L  K  :  R  V  I  S  C  *  T  *  G  C  C  H  I  *  F  W  K  H  R  T  *  S  L  G  P  C  H  K  *  F  G  E  R  G  L  Q  S  V  I  S  I  L  C  S  F  *  *  E  D  V  Q  N  R  G  T  C  Y  M  G  C  L  W  F  R  S  F  *  I  L  L  *  W  R  *  F  D  T  C  N  L  M  V  K  R  F  L  R  I  I  *  Y  H  E  L  C  S  P  L  G  W  M  </second_frame>
            <third_frame>   S  C  L  I  L  F  R  F  C  S  F  A  R  N  E  D  D  L  L  C  T  R  A  C  P  S  L  F  L  L  L  S  S  G  F  G  C  H  L  S  S  L  N  K  L  N  A  S  D  G  S  Y  K  L  S  G  Y  I  S  G  M  F  T  Q  *  R :   S  F  N  I  F  V  *  T  Y  F  S  I  F  S  *  T  K  K  M  E  T  N  R  W   : D  I  N  S  R  F  I  S  K  R  P  T  H  K  L  L  N  N  I  E  M  S  F  G  S  A  S  D  I  E  *  R  N  R  S  Q  I  F  F  *  D  S  N  N  K  I  D  L  R  F  I  H  C  V  F  *  T  *  T  A  Q  D  L  Y  M  I  *  L  W  S  L  Q  *  P  L  W  N  L  R :   G  L  F  P  V  K  H  E  A  A  V  T  Y  D  F  G  N  I  E  R  N  L  L  V  P  A  I  N  N  L  E  K  E  D  C  K  V  *  S  Q  F  Y  A  L  S  S  E  K  M  S  R  I  E  E  L  V  T  W  D  V  Y  G  S  G  P  S  E  F  Y  Y  D  G  D  D  L  T  H  A  I  S  W  *  R  D  S  *  E  L  F  D  T  T  S  Y  A  L  L  *  G  G  W </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0066K03.2" strand="-"/>
                <serials PGL_serial="8" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="53270" stop="53076"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>192</number_coding_nucleotides>
                  <number_encoded_amino_acids>64</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SCLILFRFCSFARNEDDLLCTRACPSLFLLLSSGFGCHLSSLNKLNASDGSYKLSGYISGMFTQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="+" PGL_start="59722" PGL_stop="61106"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="59722" e_stop="60033"/>
            <exon e_start="60177" e_stop="61106"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.998" e_score="1.000"/>
          <exon-only e_score="0.977"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="59722" e_stop="60033" e_length="312"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.998">
            <gDNA_intron_boundary i_start="60034" i_stop="60176" i_length="143"/>
          </intron>
          <exon e_serial="2" e_score="0.977">
            <gDNA_exon_boundary e_start="60177" e_stop="61106" e_length="930"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59722" stop="60033"/>
              <exon start="60177" stop="61106"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U312531" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60755" stop="61080"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U312529" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CACACTTGTTAGTTTCTAATAAACAGAAACAAACAGCAGCAGAGAACTGATCAGAAAAACAAAAACAAAATGGCAGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCAACTAAGGTTGGTGGTGTCTCTGCCAGAAACAACTTGCCATTGAGGTCAGCTCAAAGTTTGAGCAAGGCATTTGGTCTTGAACCATCTGCATCCAAGCTTTCTTGCTCTTTGCAAGCTGATCTTAAAGATTTTGCTCAGAAATGCACTGATGCTGCCAAGATTGCAGGATTTGCCCTTGCCACTTCTGCCCTTGTTGTCTCA : GGAGCTAATGCTGAAGGAGTTCCAAAACGTCTAACCTTTGATGAGATCCAGAGCAAGACATACATGGAAGTAAAGGGAACTGGAACAGCAAACCAGTGCCCTACCATAGATGGAGGTGTTGATAGCTTTTCCTTCAAGCCAGGCAAATACAACGCCAAGAAGTTCTGCTTAGAGCCAACATCATTCACCGTCAAGGCAGAGGGCGTAAGCAAAAATTCAGCCCCAGACTTCCAAAAGACCAAGCTTATGACTCGCTTAACCTACACTTTGGATGAGATTGAGGGACCGTTTGAAGTATCTCCTGATGGCACTGTTAAATTTGAGGAGAAGGATGGAATTGATTACGCTGCTGTTACTGTCCAGCTTCCTGGTGGTGAGCGTGTTCCGTTCCTCTTCACCATCAAACAACTTGTGGCATCTGGAAAGCCTGAGAGCTTCAGTGGCGACTTCCTTGTGCCATCCTACAGAGGTTCATCGTTTCTTGACCCAAAAGGCAGGGGTGGATCCACTGGTTACGACAATGCTGTTGCATTGCCAGCTGGAGGCAGAGGAGATGAGGAGGAGCTCCAGAAAGAGAACGTAAAGAATACCGCGTCTTTAACAGGAAAGATCACATTTACTGTTACCAAGAGCAACCCACAGACTGGTGAGGTGATTGGAGTGTTTGAGAGCATTCAGCCATCTGATACTGATCTGGGGGCAAAGACTCCTAAGGATGTAAAAATCCAGGGTATCTGGTATGCCCAGCTTGAATCATAGACAGATCTTAGACTTTGTGGATCATTTCTTCGTTTTTGATTTTGTTATAAGTTACTACAAGGTTTCAACTTTCTATGACCCAATTGGATAAGTAATGAGACAACTATCTTCCTGTATATTATCAAGTATAAGTAATAATCCATTAACATACTGAGTTGCAAAATGCTGATA</gDNA_template>
            <first_frame> H  T  C  *  F  L  I  N  R  N  K  Q  Q  Q  R  T  D  Q  K  N  K  N  K  M  A  A  S  L  Q  A  A  A  T  L  M  Q  P  T  K  V  G  G  V  S  A  R  N  N  L  P  L  R  S  A  Q  S  L  S  K  A  F  G  L  E  P  S  A  S  K  L  S  C  S  L  Q  A  D  L  K  D  F  A  Q  K  C  T  D  A  A  K  I  A  G  F  A  L  A  T  S  A  L  V  V  S  :  G  A  N  A  E  G  V  P  K  R  L  T  F  D  E  I  Q  S  K  T  Y  M  E  V  K  G  T  G  T  A  N  Q  C  P  T  I  D  G  G  V  D  S  F  S  F  K  P  G  K  Y  N  A  K  K  F  C  L  E  P  T  S  F  T  V  K  A  E  G  V  S  K  N  S  A  P  D  F  Q  K  T  K  L  M  T  R  L  T  Y  T  L  D  E  I  E  G  P  F  E  V  S  P  D  G  T  V  K  F  E  E  K  D  G  I  D  Y  A  A  V  T  V  Q  L  P  G  G  E  R  V  P  F  L  F  T  I  K  Q  L  V  A  S  G  K  P  E  S  F  S  G  D  F  L  V  P  S  Y  R  G  S  S  F  L  D  P  K  G  R  G  G  S  T  G  Y  D  N  A  V  A  L  P  A  G  G  R  G  D  E  E  E  L  Q  K  E  N  V  K  N  T  A  S  L  T  G  K  I  T  F  T  V  T  K  S  N  P  Q  T  G  E  V  I  G  V  F  E  S  I  Q  P  S  D  T  D  L  G  A  K  T  P  K  D  V  K  I  Q  G  I  W  Y  A  Q  L  E  S  *  T  D  L  R  L  C  G  S  F  L  R  F  *  F  C  Y  K  L  L  Q  G  F  N  F  L  *  P  N  W  I  S  N  E  T  T  I  F  L  Y  I  I  K  Y  K  *  *  S  I  N  I  L  S  C  K  M  L  I </first_frame>
            <second_frame>  T  L  V  S  F  *  *  T  E  T  N  S  S  R  E  L  I  R  K  T  K  T  K  W  Q  P  L  Y  K  Q  L  L  L  L  C  N  Q  L  R  L  V  V  S  L  P  E  T  T  C  H  *  G  Q  L  K  V  *  A  R  H  L  V  L  N  H  L  H  P  S  F  L  A  L  C  K  L  I  L  K  I  L  L  R  N  A  L  M  L  P  R  L  Q  D  L  P  L  P  L  L  P  L  L  S  Q :   E  L  M  L  K  E  F  Q  N  V  *  P  L  M  R  S  R  A  R  H  T  W  K  *  R  E  L  E  Q  Q  T  S  A  L  P  *  M  E  V  L  I  A  F  P  S  S  Q  A  N  T  T  P  R  S  S  A  *  S  Q  H  H  S  P  S  R  Q  R  A  *  A  K  I  Q  P  Q  T  S  K  R  P  S  L  *  L  A  *  P  T  L  W  M  R  L  R  D  R  L  K  Y  L  L  M  A  L  L  N  L  R  R  R  M  E  L  I  T  L  L  L  L  S  S  F  L  V  V  S  V  F  R  S  S  S  P  S  N  N  L  W  H  L  E  S  L  R  A  S  V  A  T  S  L  C  H  P  T  E  V  H  R  F  L  T  Q  K  A  G  V  D  P  L  V  T  T  M  L  L  H  C  Q  L  E  A  E  E  M  R  R  S  S  R  K  R  T  *  R  I  P  R  L  *  Q  E  R  S  H  L  L  L  P  R  A  T  H  R  L  V  R  *  L  E  C  L  R  A  F  S  H  L  I  L  I  W  G  Q  R  L  L  R  M  *  K  S  R  V  S  G  M  P  S  L  N  H  R  Q  I  L  D  F  V  D  H  F  F  V  F  D  F  V  I  S  Y  Y  K  V  S  T  F  Y  D  P  I  G  *  V  M  R  Q  L  S  S  C  I  L  S  S  I  S  N  N  P  L  T  Y  *  V  A  K  C  *   </second_frame>
            <third_frame>   H  L  L  V  S  N  K  Q  K  Q  T  A  A  E  N  *  S  E  K  Q  K  Q  N  G  S  L  S  T  S  S  C  Y  S  Y  A  T  N  *  G  W  W  C  L  C  Q  K  Q  L  A  I  E  V  S  S  K  F  E  Q  G  I  W  S  *  T  I  C  I  Q  A  F  L  L  F  A  S  *  S  *  R  F  C  S  E  M  H  *  C  C  Q  D  C  R  I  C  P  C  H  F  C  P  C  C  L   : R  S  *  C  *  R  S  S  K  T  S  N  L  *  *  D  P  E  Q  D  I  H  G  S  K  G  N  W  N  S  K  P  V  P  Y  H  R  W  R  C  *  *  L  F  L  Q  A  R  Q  I  Q  R  Q  E  V  L  L  R  A  N  I  I  H  R  Q  G  R  G  R  K  Q  K  F  S  P  R  L  P  K  D  Q  A  Y  D  S  L  N  L  H  F  G  *  D  *  G  T  V  *  S  I  S  *  W  H  C  *  I  *  G  E  G  W  N  *  L  R  C  C  Y  C  P  A  S  W  W  *  A  C  S  V  P  L  H  H  Q  T  T  C  G  I  W  K  A  *  E  L  Q  W  R  L  P  C  A  I  L  Q  R  F  I  V  S  *  P  K  R  Q  G  W  I  H  W  L  R  Q  C  C  C  I  A  S  W  R  Q  R  R  *  G  G  A  P  E  R  E  R  K  E  Y  R  V  F  N  R  K  D  H  I  Y  C  Y  Q  E  Q  P  T  D  W  *  G  D  W  S  V  *  E  H  S  A  I  *  Y  *  S  G  G  K  D  S  *  G  C  K  N  P  G  Y  L  V  C  P  A  *  I  I  D  R  S  *  T  L  W  I  I  S  S  F  L  I  L  L  *  V  T  T  R  F  Q  L  S  M  T  Q  L  D  K  *  *  D  N  Y  L  P  V  Y  Y  Q  V  *  V  I  I  H  *  H  T  E  L  Q  N  A  D  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0066K03.2" strand="+"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="59734" stop="60033"/>
                    <exon start="60177" stop="60935"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1056</number_coding_nucleotides>
                  <number_encoded_amino_acids>352</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FLINRNKQQQRTDQKNKNKMAASLQAAATLMQPTKVGGVSARNNLPLRSAQSLSKAFGLEPSASKLSCSLQADLKDFAQKCTDAAKIAGFALATSALVVSGANAEGVPKRLTFDEIQSKTYMEVKGTGTANQCPTIDGGVDSFSFKPGKYNAKKFCLEPTSFTVKAEGVSKNSAPDFQKTKLMTRLTYTLDEIEGPFEVSPDGTVKFEEKDGIDYAAVTVQLPGGERVPFLFTIKQLVASGKPESFSGDFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELQKENVKNTASLTGKITFTVTKSNPQTGEVIGVFESIQPSDTDLGAKTPKDVKIQGIWYAQLES*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="-" PGL_start="65454" PGL_stop="61653"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="65454" e_stop="65097"/>
            <exon e_start="64596" e_stop="64378"/>
            <exon e_start="63566" e_stop="63480"/>
            <exon e_start="63089" e_stop="62943"/>
            <exon e_start="62777" e_stop="62751"/>
            <exon e_start="62665" e_stop="62570"/>
            <exon e_start="61964" e_stop="61653"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.928" acc_prob="0.983" e_score="0.997"/>
          <exon-intron don_prob="0.974" acc_prob="0.976" e_score="1.000"/>
          <exon-intron don_prob="0.888" acc_prob="0.873" e_score="1.000"/>
          <exon-intron don_prob="0.943" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.981" acc_prob="0.973" e_score="1.000"/>
          <exon-intron don_prob="0.966" acc_prob="0.951" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.997">
            <gDNA_exon_boundary e_start="65454" e_stop="65097" e_length="358"/>
          </exon>
          <intron i_serial="1" don_prob="0.928" acc_prob="0.983">
            <gDNA_intron_boundary i_start="65096" i_stop="64597" i_length="500"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="64596" e_stop="64378" e_length="219"/>
          </exon>
          <intron i_serial="2" don_prob="0.974" acc_prob="0.976">
            <gDNA_intron_boundary i_start="64377" i_stop="63567" i_length="811"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="63566" e_stop="63480" e_length="87"/>
          </exon>
          <intron i_serial="3" don_prob="0.888" acc_prob="0.873">
            <gDNA_intron_boundary i_start="63479" i_stop="63090" i_length="390"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="63089" e_stop="62943" e_length="147"/>
          </exon>
          <intron i_serial="4" don_prob="0.943" acc_prob="0.998">
            <gDNA_intron_boundary i_start="62942" i_stop="62778" i_length="165"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="62777" e_stop="62751" e_length="27"/>
          </exon>
          <intron i_serial="5" don_prob="0.981" acc_prob="0.973">
            <gDNA_intron_boundary i_start="62750" i_stop="62666" i_length="85"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="62665" e_stop="62570" e_length="96"/>
          </exon>
          <intron i_serial="6" don_prob="0.966" acc_prob="0.951">
            <gDNA_intron_boundary i_start="62569" i_stop="61965" i_length="605"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="61964" e_stop="61653" e_length="312"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="65454" stop="65097"/>
              <exon start="64596" stop="64378"/>
              <exon start="63566" stop="63480"/>
              <exon start="63089" stop="62943"/>
              <exon start="62777" stop="62751"/>
              <exon start="62665" stop="62570"/>
              <exon start="61964" stop="61653"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U326789" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TGACAGGGATATTTAGTGCAATTTATCCTAAAAACTTTAACCCAAATACGACGGGAGCCTTATCTTCTCGTGGCTGAAACTGTAGAAAGCTTGTCTATTTCACTGTTTTTTTTTAATTAATTATACATTAATTCTGTAGTTTGTAGTTTGTTGAATGGGGAGTATTGCTGCATATTGTGGTGGATTGCTATGTTGTTCGGAGTTACGATCGAGCAATTCAAGGATAGTTTCGGGCTTATCGGTGTTGGAACAGGTGGATAAGGAGTTGACGAAGGGAGATGAAAGGGCTGCTTTGTCTCTTGTCAAGGATTTGCAGGGAAAACCTGGTGGCCTTCGGTGTTTTGGCGCTGCTAGACAG : GTACCACAGAGGCTGTATTCCTTAGATGAATTGAAGTTGAATGGAATAGAAGCCATATCTCTTCTGTCACCAGTTGATGCTACCCTTGGAGCAATTGAAAGAAATCTGCAAATTGCTGCTATATTAAGTGGTTCTGCAGCATGGTATGCGCTTGATTTGAGCCCACAACAGATCCTTTTTGTTTCTCTGGGGGTTCTGTTTCTGTGGACTCTGGACTTG : GTTTCTTTCAATGGAGGAGTTGGTACTTTGGTCCTTGACACAATTGGCCATACATTCAGTCAGAAGTACCATAACAGGGTTATTCAA : CATGAAGCTGGGCATTTCTTGATTGCCTACTTGCTGGGTATTCTTCCCAAGGGGTATACACTCACCAGTTTGGATGCTTTGAAGAAGGAAGGATCGTTGAACATCCAAGCAGGAACAGCCTTTGTGGACTTAGAATTTATTGAGGAA : GTAAATAGAGGAAAAGTAACAGCCACG : ATGCTGAACAGGTTTTCATGTATTGCGCTAGCAGGTGTAGCAACTGAGTATCTTCTGTTTGGGTATGCTGAGGGAGGTCTGTCTGACATTAATCAG : TTGGATGCATTACTGAAAAGCTTGGGATTTACACAGAAGAAAGCAGATTCTCAGGTGAGATGGGCTGTATTGAACACAATCCTCATTTTGCGACGCCACGAGAAGGCACGATCGAAGCTTGCAGAGGCAATGACTCAAGGGAAATCTGTGGGCGTCTGCATTGACATCATTGAGAAATCCATCAGCGATGATGATTTGTAGCTTCATATTTCTTAAGATCCACCATATAATTCTGATATCCCCTGTGATACTCCTTCATTCTCTATATAGATTATAGAGTGACCTTTTGTGTGAAATTAAAATGAAGTTATT</gDNA_template>
            <first_frame> *  Q  G  Y  L  V  Q  F  I  L  K  T  L  T  Q  I  R  R  E  P  Y  L  L  V  A  E  T  V  E  S  L  S  I  S  L  F  F  F  N  *  L  Y  I  N  S  V  V  C  S  L  L  N  G  E  Y  C  C  I  L  W  W  I  A  M  L  F  G  V  T  I  E  Q  F  K  D  S  F  G  L  I  G  V  G  T  G  G  *  G  V  D  E  G  R  *  K  G  C  F  V  S  C  Q  G  F  A  G  K  T  W  W  P  S  V  F  W  R  C  *  T   : G  T  T  E  A  V  F  L  R  *  I  E  V  E  W  N  R  S  H  I  S  S  V  T  S  *  C  Y  P  W  S  N  *  K  K  S  A  N  C  C  Y  I  K  W  F  C  S  M  V  C  A  *  F  E  P  T  T  D  P  F  C  F  S  G  G  S  V  S  V  D  S  G  L   : G  F  F  Q  W  R  S  W  Y  F  G  P  *  H  N  W  P  Y  I  Q  S  E  V  P  *  Q  G  Y  S   : T  *  S  W  A  F  L  D  C  L  L  A  G  Y  S  S  Q  G  V  Y  T  H  Q  F  G  C  F  E  E  G  R  I  V  E  H  P  S  R  N  S  L  C  G  L  R  I  Y  *  G   : S  K  *  R  K  S  N  S  H   : D  A  E  Q  V  F  M  Y  C  A  S  R  C  S  N  *  V  S  S  V  W  V  C  *  G  R  S  V  *  H  *  S   : V  G  C  I  T  E  K  L  G  I  Y  T  E  E  S  R  F  S  G  E  M  G  C  I  E  H  N  P  H  F  A  T  P  R  E  G  T  I  E  A  C  R  G  N  D  S  R  E  I  C  G  R  L  H  *  H  H  *  E  I  H  Q  R  *  *  F  V  A  S  Y  F  L  R  S  T  I  *  F  *  Y  P  L  *  Y  S  F  I  L  Y  I  D  Y  R  V  T  F  C  V  K  L  K  *  S  Y  </first_frame>
            <second_frame>  D  R  D  I  *  C  N  L  S  *  K  L  *  P  K  Y  D  G  S  L  I  F  S  W  L  K  L  *  K  A  C  L  F  H  C  F  F  L  I  N  Y  T  L  I  L  *  F  V  V  C  *  M  G  S  I  A  A  Y  C  G  G  L  L  C  C  S  E  L  R  S  S  N  S  R  I  V  S  G  L  S  V  L  E  Q  V  D  K  E  L  T  K  G  D  E  R  A  A  L  S  L  V  K  D  L  Q  G  K  P  G  G  L  R  C  F  G  A  A  R  Q  :  V  P  Q  R  L  Y  S  L  D  E  L  K  L  N  G  I  E  A  I  S  L  L  S  P  V  D  A  T  L  G  A  I  E  R  N  L  Q  I  A  A  I  L  S  G  S  A  A  W  Y  A  L  D  L  S  P  Q  Q  I  L  F  V  S  L  G  V  L  F  L  W  T  L  D  L  :  V  S  F  N  G  G  V  G  T  L  V  L  D  T  I  G  H  T  F  S  Q  K  Y  H  N  R  V  I  Q  :  H  E  A  G  H  F  L  I  A  Y  L  L  G  I  L  P  K  G  Y  T  L  T  S  L  D  A  L  K  K  E  G  S  L  N  I  Q  A  G  T  A  F  V  D  L  E  F  I  E  E  :  V  N  R  G  K  V  T  A  T  :  M  L  N  R  F  S  C  I  A  L  A  G  V  A  T  E  Y  L  L  F  G  Y  A  E  G  G  L  S  D  I  N  Q  :  L  D  A  L  L  K  S  L  G  F  T  Q  K  K  A  D  S  Q  V  R  W  A  V  L  N  T  I  L  I  L  R  R  H  E  K  A  R  S  K  L  A  E  A  M  T  Q  G  K  S  V  G  V  C  I  D  I  I  E  K  S  I  S  D  D  D  L  *  L  H  I  S  *  D  P  P  Y  N  S  D  I  P  C  D  T  P  S  F  S  I  *  I  I  E  *  P  F  V  *  N  *  N  E  V  I </second_frame>
            <third_frame>   T  G  I  F  S  A  I  Y  P  K  N  F  N  P  N  T  T  G  A  L  S  S  R  G  *  N  C  R  K  L  V  Y  F  T  V  F  F  *  L  I  I  H  *  F  C  S  L  *  F  V  E  W  G  V  L  L  H  I  V  V  D  C  Y  V  V  R  S  Y  D  R  A  I  Q  G  *  F  R  A  Y  R  C  W  N  R  W  I  R  S  *  R  R  E  M  K  G  L  L  C  L  L  S  R  I  C  R  E  N  L  V  A  F  G  V  L  A  L  L  D  R :   Y  H  R  G  C  I  P  *  M  N  *  S  *  M  E  *  K  P  Y  L  F  C  H  Q  L  M  L  P  L  E  Q  L  K  E  I  C  K  L  L  L  Y  *  V  V  L  Q  H  G  M  R  L  I  *  A  H  N  R  S  F  L  F  L  W  G  F  C  F  C  G  L  W  T  W :   F  L  S  M  E  E  L  V  L  W  S  L  T  Q  L  A  I  H  S  V  R  S  T  I  T  G  L  F  N :   M  K  L  G  I  S  *  L  P  T  C  W  V  F  F  P  R  G  I  H  S  P  V  W  M  L  *  R  R  K  D  R  *  T  S  K  Q  E  Q  P  L  W  T  *  N  L  L  R  K :   *  I  E  E  K  *  Q  P  R :   C  *  T  G  F  H  V  L  R  *  Q  V  *  Q  L  S  I  F  C  L  G  M  L  R  E  V  C  L  T  L  I  S :   W  M  H  Y  *  K  A  W  D  L  H  R  R  K  Q  I  L  R  *  D  G  L  Y  *  T  Q  S  S  F  C  D  A  T  R  R  H  D  R  S  L  Q  R  Q  *  L  K  G  N  L  W  A  S  A  L  T  S  L  R  N  P  S  A  M  M  I  C  S  F  I  F  L  K  I  H  H  I  I  L  I  S  P  V  I  L  L  H  S  L  Y  R  L  *  S  D  L  L  C  E  I  K  M  K  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0066K03.2" strand="-"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="65300" stop="65097"/>
                    <exon start="64596" stop="64378"/>
                    <exon start="63566" stop="63480"/>
                    <exon start="63089" stop="62943"/>
                    <exon start="62777" stop="62751"/>
                    <exon start="62665" stop="62570"/>
                    <exon start="61964" stop="61764"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>978</number_coding_nucleotides>
                  <number_encoded_amino_acids>326</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>MGSIAAYCGGLLCCSELRSSNSRIVSGLSVLEQVDKELTKGDERAALSLVKDLQGKPGGLRCFGAARQVPQRLYSLDELKLNGIEAISLLSPVDATLGAIERNLQIAAILSGSAAWYALDLSPQQILFVSLGVLFLWTLDLVSFNGGVGTLVLDTIGHTFSQKYHNRVIQHEAGHFLIAYLLGILPKGYTLTSLDALKKEGSLNIQAGTAFVDLEFIEEVNRGKVTATMLNRFSCIALAGVATEYLLFGYAEGGLSDINQLDALLKSLGFTQKKADSQVRWAVLNTILILRRHEKARSKLAEAMTQGKSVGVCIDIIEKSISDDDL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="+" PGL_start="68203" PGL_stop="70570"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="68203" e_stop="68293"/>
            <exon e_start="70113" e_stop="70570"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.995" acc_prob="0.934" e_score="1.000"/>
          <exon-only e_score="0.989"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="68203" e_stop="68293" e_length="91"/>
          </exon>
          <intron i_serial="1" don_prob="0.995" acc_prob="0.934">
            <gDNA_intron_boundary i_start="68294" i_stop="70112" i_length="1819"/>
          </intron>
          <exon e_serial="2" e_score="0.989">
            <gDNA_exon_boundary e_start="70113" e_stop="70570" e_length="458"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="68203" stop="68293"/>
              <exon start="70113" stop="70570"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U330990" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTAATTTCTATCGGAAATTAGGGCAAATTCTTTGCTTAAGTCTTCGAGAGAAAGCATCCGAGGCTTCTCCCTCTTCTACTTGTGGGTTCAG : GTTATTTGCAATTGTCATGATTGATAAAAAAATTGACAGTAAAGATGTGGAAGCTCTACAGCAGAATGGAGATGAGAGTAGATCTCTTCAAATAAAGTTTCTGTTTTTCGCCCGTGCTAGAGATCTGACTGGCATGACTGAAATGCCATTGGAAGTTTCTTATGGTAGTACTGCCGGTGACTGCTTGAATAAGGTCATTTCTCACTTTCCACGGTTGGAAGAGATACGTGGGTGCATGCTTCTTGCCCGGAATGAGGAATACACAGCCGAATCCACCACTGTTAAAGATGGAGATGAATTGGCCATTATACCTCCTATTAGTGGAGGCTAACTCAGTTCCTGAACTGCAATTATCGGAACTCTATTTTACTTGTATTTATGTGTGTGATCATATTACTAAGCTGTGTTATTTATTCCCTAATAATACAAGAACAAAATTCTCTTGCTAAAATCATTGA</gDNA_template>
            <first_frame> L  I  S  I  G  N  *  G  K  F  F  A  *  V  F  E  R  K  H  P  R  L  L  P  L  L  L  V  G  S   : G  Y  L  Q  L  S  *  L  I  K  K  L  T  V  K  M  W  K  L  Y  S  R  M  E  M  R  V  D  L  F  K  *  S  F  C  F  S  P  V  L  E  I  *  L  A  *  L  K  C  H  W  K  F  L  M  V  V  L  P  V  T  A  *  I  R  S  F  L  T  F  H  G  W  K  R  Y  V  G  A  C  F  L  P  G  M  R  N  T  Q  P  N  P  P  L  L  K  M  E  M  N  W  P  L  Y  L  L  L  V  E  A  N  S  V  P  E  L  Q  L  S  E  L  Y  F  T  C  I  Y  V  C  D  H  I  T  K  L  C  Y  L  F  P  N  N  T  R  T  K  F  S  C  *  N  H  * </first_frame>
            <second_frame>  *  F  L  S  E  I  R  A  N  S  L  L  K  S  S  R  E  S  I  R  G  F  S  L  F  Y  L  W  V  Q  :  V  I  C  N  C  H  D  *  *  K  N  *  Q  *  R  C  G  S  S  T  A  E  W  R  *  E  *  I  S  S  N  K  V  S  V  F  R  P  C  *  R  S  D  W  H  D  *  N  A  I  G  S  F  L  W  *  Y  C  R  *  L  L  E  *  G  H  F  S  L  S  T  V  G  R  D  T  W  V  H  A  S  C  P  E  *  G  I  H  S  R  I  H  H  C  *  R  W  R  *  I  G  H  Y  T  S  Y  *  W  R  L  T  Q  F  L  N  C  N  Y  R  N  S  I  L  L  V  F  M  C  V  I  I  L  L  S  C  V  I  Y  S  L  I  I  Q  E  Q  N  S  L  A  K  I  I   </second_frame>
            <third_frame>   N  F  Y  R  K  L  G  Q  I  L  C  L  S  L  R  E  K  A  S  E  A  S  P  S  S  T  C  G  F  R :   L  F  A  I  V  M  I  D  K  K  I  D  S  K  D  V  E  A  L  Q  Q  N  G  D  E  S  R  S  L  Q  I  K  F  L  F  F  A  R  A  R  D  L  T  G  M  T  E  M  P  L  E  V  S  Y  G  S  T  A  G  D  C  L  N  K  V  I  S  H  F  P  R  L  E  E  I  R  G  C  M  L  L  A  R  N  E  E  Y  T  A  E  S  T  T  V  K  D  G  D  E  L  A  I  I  P  P  I  S  G  G  *  L  S  S  *  T  A  I  I  G  T  L  F  Y  L  Y  L  C  V  *  S  Y  Y  *  A  V  L  F  I  P  *  *  Y  K  N  K  I  L  L  L  K  S  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0066K03.2" strand="+"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="68205" stop="68293"/>
                    <exon start="70113" stop="70443"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>417</number_coding_nucleotides>
                  <number_encoded_amino_acids>139</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NFYRKLGQILCLSLREKASEASPSSTCGFRLFAIVMIDKKIDSKDVEALQQNGDESRSLQIKFLFFARARDLTGMTEMPLEVSYGSTAGDCLNKVISHFPRLEEIRGCMLLARNEEYTAESTTVKDGDELAIIPPISGG*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="-" PGL_start="89335" PGL_stop="87892"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="89335" e_stop="89254"/>
            <exon e_start="89087" e_stop="88693"/>
            <exon e_start="88607" e_stop="88508"/>
            <exon e_start="88404" e_stop="88345"/>
            <exon e_start="88270" e_stop="88184"/>
            <exon e_start="87938" e_stop="87892"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.845" acc_prob="0.931" e_score="1.000"/>
          <exon-intron don_prob="0.990" acc_prob="0.952" e_score="1.000"/>
          <exon-intron don_prob="0.928" acc_prob="0.723" e_score="1.000"/>
          <exon-intron don_prob="0.971" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.986" acc_prob="0.719" e_score="1.000"/>
          <exon-only e_score="0.957"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="89335" e_stop="89254" e_length="82"/>
          </exon>
          <intron i_serial="1" don_prob="0.845" acc_prob="0.931">
            <gDNA_intron_boundary i_start="89253" i_stop="89088" i_length="166"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="89087" e_stop="88693" e_length="395"/>
          </exon>
          <intron i_serial="2" don_prob="0.990" acc_prob="0.952">
            <gDNA_intron_boundary i_start="88692" i_stop="88608" i_length="85"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="88607" e_stop="88508" e_length="100"/>
          </exon>
          <intron i_serial="3" don_prob="0.928" acc_prob="0.723">
            <gDNA_intron_boundary i_start="88507" i_stop="88405" i_length="103"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="88404" e_stop="88345" e_length="60"/>
          </exon>
          <intron i_serial="4" don_prob="0.971" acc_prob="0.991">
            <gDNA_intron_boundary i_start="88344" i_stop="88271" i_length="74"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="88270" e_stop="88184" e_length="87"/>
          </exon>
          <intron i_serial="5" don_prob="0.986" acc_prob="0.719">
            <gDNA_intron_boundary i_start="88183" i_stop="87939" i_length="245"/>
          </intron>
          <exon e_serial="6" e_score="0.957">
            <gDNA_exon_boundary e_start="87938" e_stop="87892" e_length="47"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="89335" stop="89254"/>
              <exon start="89087" stop="88693"/>
              <exon start="88607" stop="88508"/>
              <exon start="88404" stop="88345"/>
              <exon start="88270" stop="88184"/>
              <exon start="87938" stop="87892"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U333378" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GTCGAGCAGAGCCTCCCCACCGGAAGAGACACTCGGCAAAACATTGCGTGCCTGTCATTCTCAACCGTTATCTATGATGGAG : TATGCACAAAATGCTTCTTCAAATGTAATCAGTTTGGCAGAGCATCTAGGCACCCGTATCTCTGATCACGTTCCTGATACACCAAACAAGCTGTCCGAGGATATGATAAAGTGCATGTGCACCATATATAGCAAGCTTGCTGATCCTCCACTGACAAATCCCGGTCTTTCATCGCCAACCTCATCCTTGTCTTCCATAAGTGCATTTTCCCCAAAAGACATATGGAGTCCAGGATTTAGGAATGATTCATCTTTTGATGTTCGGCTGGACAATCCTTTTCATGTAGAAGGGTTGAAGGAGTTCAGTGGACCTTACAGCACAATGATTGAAGTACAGTGTGTATATAGAGATACTCAGAAATTGGGCGATATTGAACCGATGTTACAGCACTTCAG : GTCACTTATTTCTCGCCTAGAACAAATTGATCCACGAAAGTTGAGTCACGAAGAGAAGATAGCATTCTGGCTTAACGTACATAATGCATTGGTGATGCAT : GCATTTCTAGCTTACGGTATCCCCCAAAACAATGTCAAGAGAATATTTCTACTCTTGAAG : GCTGCCTATAATGTTGGAGGCCATGTAGTAAGTGCAGATATGATACAGAACTCTATCCTGGGATGTCGAATGTCCAGACCAGGACAG : TGGCTTCGCTTGTTACTTTCTTCTAAAGGAAAATTCAAGACTGGGGA</gDNA_template>
            <first_frame> V  E  Q  S  L  P  T  G  R  D  T  R  Q  N  I  A  C  L  S  F  S  T  V  I  Y  D  G   : V  C  T  K  C  F  F  K  C  N  Q  F  G  R  A  S  R  H  P  Y  L  *  S  R  S  *  Y  T  K  Q  A  V  R  G  Y  D  K  V  H  V  H  H  I  *  Q  A  C  *  S  S  T  D  K  S  R  S  F  I  A  N  L  I  L  V  F  H  K  C  I  F  P  K  R  H  M  E  S  R  I  *  E  *  F  I  F  *  C  S  A  G  Q  S  F  S  C  R  R  V  E  G  V  Q  W  T  L  Q  H  N  D  *  S  T  V  C  I  *  R  Y  S  E  I  G  R  Y  *  T  D  V  T  A  L  Q  :  V  T  Y  F  S  P  R  T  N  *  S  T  K  V  E  S  R  R  E  D  S  I  L  A  *  R  T  *  C  I  G  D  A   : C  I  S  S  L  R  Y  P  P  K  Q  C  Q  E  N  I  S  T  L  E   : G  C  L  *  C  W  R  P  C  S  K  C  R  Y  D  T  E  L  Y  P  G  M  S  N  V  Q  T  R  T   : V  A  S  L  V  T  F  F  *  R  K  I  Q  D  W  G </first_frame>
            <second_frame>  S  S  R  A  S  P  P  E  E  T  L  G  K  T  L  R  A  C  H  S  Q  P  L  S  M  M  E  :  Y  A  Q  N  A  S  S  N  V  I  S  L  A  E  H  L  G  T  R  I  S  D  H  V  P  D  T  P  N  K  L  S  E  D  M  I  K  C  M  C  T  I  Y  S  K  L  A  D  P  P  L  T  N  P  G  L  S  S  P  T  S  S  L  S  S  I  S  A  F  S  P  K  D  I  W  S  P  G  F  R  N  D  S  S  F  D  V  R  L  D  N  P  F  H  V  E  G  L  K  E  F  S  G  P  Y  S  T  M  I  E  V  Q  C  V  Y  R  D  T  Q  K  L  G  D  I  E  P  M  L  Q  H  F  R :   S  L  I  S  R  L  E  Q  I  D  P  R  K  L  S  H  E  E  K  I  A  F  W  L  N  V  H  N  A  L  V  M  H  :  A  F  L  A  Y  G  I  P  Q  N  N  V  K  R  I  F  L  L  L  K  :  A  A  Y  N  V  G  G  H  V  V  S  A  D  M  I  Q  N  S  I  L  G  C  R  M  S  R  P  G  Q  :  W  L  R  L  L  L  S  S  K  G  K  F  K  T  G   </second_frame>
            <third_frame>   R  A  E  P  P  H  R  K  R  H  S  A  K  H  C  V  P  V  I  L  N  R  Y  L  *  W  S :   M  H  K  M  L  L  Q  M  *  S  V  W  Q  S  I  *  A  P  V  S  L  I  T  F  L  I  H  Q  T  S  C  P  R  I  *  *  S  A  C  A  P  Y  I  A  S  L  L  I  L  H  *  Q  I  P  V  F  H  R  Q  P  H  P  C  L  P  *  V  H  F  P  Q  K  T  Y  G  V  Q  D  L  G  M  I  H  L  L  M  F  G  W  T  I  L  F  M  *  K  G  *  R  S  S  V  D  L  T  A  Q  *  L  K  Y  S  V  Y  I  E  I  L  R  N  W  A  I  L  N  R  C  Y  S  T  S   : G  H  L  F  L  A  *  N  K  L  I  H  E  S  *  V  T  K  R  R  *  H  S  G  L  T  Y  I  M  H  W  *  C  M :   H  F  *  L  T  V  S  P  K  T  M  S  R  E  Y  F  Y  S  *  R :   L  P  I  M  L  E  A  M  *  *  V  Q  I  *  Y  R  T  L  S  W  D  V  E  C  P  D  Q  D  S :   G  F  A  C  Y  F  L  L  K  E  N  S  R  L  G  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0066K03.2" strand="-"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="89334" stop="89254"/>
                    <exon start="89087" stop="88693"/>
                    <exon start="88607" stop="88508"/>
                    <exon start="88404" stop="88345"/>
                    <exon start="88270" stop="88184"/>
                    <exon start="87938" stop="87894"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>768</number_coding_nucleotides>
                  <number_encoded_amino_acids>256</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SSRASPPEETLGKTLRACHSQPLSMMEYAQNASSNVISLAEHLGTRISDHVPDTPNKLSEDMIKCMCTIYSKLADPPLTNPGLSSPTSSLSSISAFSPKDIWSPGFRNDSSFDVRLDNPFHVEGLKEFSGPYSTMIEVQCVYRDTQKLGDIEPMLQHFRSLISRLEQIDPRKLSHEEKIAFWLNVHNALVMHAFLAYGIPQNNVKRIFLLLKAAYNVGGHVVSADMIQNSILGCRMSRPGQWLRLLLSSKGKFKTG</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="-" PGL_start="92162" PGL_stop="89464"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="92162" e_stop="91886"/>
            <exon e_start="91787" e_stop="91709"/>
            <exon e_start="91213" e_stop="91141"/>
            <exon e_start="90866" e_stop="90783"/>
            <exon e_start="90693" e_stop="90577"/>
            <exon e_start="89676" e_stop="89464"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.424" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.885" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.985" e_score="1.000"/>
          <exon-intron don_prob="0.952" acc_prob="0.977" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="0.981"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="92162" e_stop="91886" e_length="277"/>
          </exon>
          <intron i_serial="1" don_prob="0.424" acc_prob="0.000">
            <gDNA_intron_boundary i_start="91885" i_stop="91788" i_length="98"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="91787" e_stop="91709" e_length="79"/>
          </exon>
          <intron i_serial="2" don_prob="0.885" acc_prob="0.997">
            <gDNA_intron_boundary i_start="91708" i_stop="91214" i_length="495"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="91213" e_stop="91141" e_length="73"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.985">
            <gDNA_intron_boundary i_start="91140" i_stop="90867" i_length="274"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="90866" e_stop="90783" e_length="84"/>
          </exon>
          <intron i_serial="4" don_prob="0.952" acc_prob="0.977">
            <gDNA_intron_boundary i_start="90782" i_stop="90694" i_length="89"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="90693" e_stop="90577" e_length="117"/>
          </exon>
          <intron i_serial="5" don_prob="0.999" acc_prob="0.999">
            <gDNA_intron_boundary i_start="90576" i_stop="89677" i_length="900"/>
          </intron>
          <exon e_serial="6" e_score="0.981">
            <gDNA_exon_boundary e_start="89676" e_stop="89464" e_length="213"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92162" stop="91886"/>
              <exon start="91787" stop="91709"/>
              <exon start="91213" stop="91141"/>
              <exon start="90866" stop="90783"/>
              <exon start="90693" stop="90577"/>
              <exon start="89676" stop="89464"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U328005" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCTTCACCTTCCCCTCTATTGCACAAAGCTATATTGGGAATGTGGGAGTAACAGATTTTTGGAGCAAAAGTGAGCATCTGCTACTTACACTTTCAACTCCTGGTCAAAAGGAGGGCTGCCTTTTCTTGTCCATTTGAGACTTTATGCAAAGACAAGTTGGGGGTTTTATTTCAAGCTGAGGTTTTTGAGGCCTGTTTTGGGTCTTTAGGACCAGTGGGTCTGTTTCCATTTTCCAAATATTTGATCTTTGATAGTTACCTGTTTGAAGTATGTACTG : ATATGGATTTTGAAGGGTTTAGCACCAGTAAATTTCCAGAAAATAGAGTGACATCATCTAAACACACGCGTTCCAAGAG : CTTCCCAGTTAAACCAGAACAAGAGGAGAATATCGTGGATCATTCTGTAGAGACCTCTAATCGATTGAAGTTG : GATACGAGTCACGGGAATGACTGTAACGTGAGCGAGAAGAAACCATCATCCTCGGCTGAAATACAAAGTTCTCTGAGGCAAGAG : ATAATGCAGCTGGAGAGAAGATTACATGATCAAGTTGCAGTTCGATGTGCTCTTGAGAAAGCATTAGGTTATAAATCTTCTTCTCAAGATGTCAATGAAGTGACCGCAATGCCTAAG : CCAGCAACAGAACTGATCAGAGATATTGCAGTACTAGAATTGGAAGTTGGGCATTTGGAACAGTATCTTCTCTCACTATACAGGAAAGCATTTGATCAACAAGTCTCATCCTTATCTCCTCCCACAAAAGATGATAAACTAAAATCTCCTATAAGTACCCCAAGGAGGCGTCTTGATTTCTCCAATTCTGATGTGATATTGAAAAGGGAAAAA</gDNA_template>
            <first_frame> S  S  P  S  P  L  L  H  K  A  I  L  G  M  W  E  *  Q  I  F  G  A  K  V  S  I  C  Y  L  H  F  Q  L  L  V  K  R  R  A  A  F  S  C  P  F  E  T  L  C  K  D  K  L  G  V  L  F  Q  A  E  V  F  E  A  C  F  G  S  L  G  P  V  G  L  F  P  F  S  K  Y  L  I  F  D  S  Y  L  F  E  V  C  T   : D  M  D  F  E  G  F  S  T  S  K  F  P  E  N  R  V  T  S  S  K  H  T  R  S  K  S :   F  P  V  K  P  E  Q  E  E  N  I  V  D  H  S  V  E  T  S  N  R  L  K  L  :  D  T  S  H  G  N  D  C  N  V  S  E  K  K  P  S  S  S  A  E  I  Q  S  S  L  R  Q  E  :  I  M  Q  L  E  R  R  L  H  D  Q  V  A  V  R  C  A  L  E  K  A  L  G  Y  K  S  S  S  Q  D  V  N  E  V  T  A  M  P  K  :  P  A  T  E  L  I  R  D  I  A  V  L  E  L  E  V  G  H  L  E  Q  Y  L  L  S  L  Y  R  K  A  F  D  Q  Q  V  S  S  L  S  P  P  T  K  D  D  K  L  K  S  P  I  S  T  P  R  R  R  L  D  F  S  N  S  D  V  I  L  K  R  E  K </first_frame>
            <second_frame>  L  H  L  P  L  Y  C  T  K  L  Y  W  E  C  G  S  N  R  F  L  E  Q  K  *  A  S  A  T  Y  T  F  N  S  W  S  K  G  G  L  P  F  L  V  H  L  R  L  Y  A  K  T  S  W  G  F  Y  F  K  L  R  F  L  R  P  V  L  G  L  *  D  Q  W  V  C  F  H  F  P  N  I  *  S  L  I  V  T  C  L  K  Y  V  L  :  I  W  I  L  K  G  L  A  P  V  N  F  Q  K  I  E  *  H  H  L  N  T  R  V  P  R   : A  S  Q  L  N  Q  N  K  R  R  I  S  W  I  I  L  *  R  P  L  I  D  *  S  W :   I  R  V  T  G  M  T  V  T  *  A  R  R  N  H  H  P  R  L  K  Y  K  V  L  *  G  K  R :   *  C  S  W  R  E  D  Y  M  I  K  L  Q  F  D  V  L  L  R  K  H  *  V  I  N  L  L  L  K  M  S  M  K  *  P  Q  C  L  S :   Q  Q  Q  N  *  S  E  I  L  Q  Y  *  N  W  K  L  G  I  W  N  S  I  F  S  H  Y  T  G  K  H  L  I  N  K  S  H  P  Y  L  L  P  Q  K  M  I  N  *  N  L  L  *  V  P  Q  G  G  V  L  I  S  P  I  L  M  *  Y  *  K  G  K   </second_frame>
            <third_frame>   F  T  F  P  S  I  A  Q  S  Y  I  G  N  V  G  V  T  D  F  W  S  K  S  E  H  L  L  L  T  L  S  T  P  G  Q  K  E  G  C  L  F  L  S  I  *  D  F  M  Q  R  Q  V  G  G  F  I  S  S  *  G  F  *  G  L  F  W  V  F  R  T  S  G  S  V  S  I  F  Q  I  F  D  L  *  *  L  P  V  *  S  M  Y  * :   Y  G  F  *  R  V  *  H  Q  *  I  S  R  K  *  S  D  I  I  *  T  H  A  F  Q  E  :  L  P  S  *  T  R  T  R  G  E  Y  R  G  S  F  C  R  D  L  *  S  I  E  V   : G  Y  E  S  R  E  *  L  *  R  E  R  E  E  T  I  I  L  G  *  N  T  K  F  S  E  A  R   : D  N  A  A  G  E  K  I  T  *  S  S  C  S  S  M  C  S  *  E  S  I  R  L  *  I  F  F  S  R  C  Q  *  S  D  R  N  A  *   : A  S  N  R  T  D  Q  R  Y  C  S  T  R  I  G  S  W  A  F  G  T  V  S  S  L  T  I  Q  E  S  I  *  S  T  S  L  I  L  I  S  S  H  K  R  *  *  T  K  I  S  Y  K  Y  P  K  E  A  S  *  F  L  Q  F  *  C  D  I  E  K  G  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0066K03.2" strand="-"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="92111" stop="91886"/>
                    <exon start="91787" stop="91709"/>
                    <exon start="91213" stop="91141"/>
                    <exon start="90866" stop="90783"/>
                    <exon start="90693" stop="90577"/>
                    <exon start="89676" stop="89464"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>792</number_coding_nucleotides>
                  <number_encoded_amino_acids>264</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QIFGAKVSICYLHFQLLVKRRAAFSCPFETLCKDKLGVLFQAEVFEACFGSLGPVGLFPFSKYLIFDSYLFEVCTDMDFEGFSTSKFPENRVTSSKHTRSKSFPVKPEQEENIVDHSVETSNRLKLDTSHGNDCNVSEKKPSSSAEIQSSLRQEIMQLERRLHDQVAVRCALEKALGYKSSSQDVNEVTAMPKPATELIRDIAVLELEVGHLEQYLLSLYRKAFDQQVSSLSPPTKDDKLKSPISTPRRRLDFSNSDVILKREK</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="+" PGL_start="107996" PGL_stop="113835"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="109353" e_stop="110873"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.992"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.992">
            <gDNA_exon_boundary e_start="109353" e_stop="110873" e_length="1521"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="109353" stop="110255"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U330053" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="110151" stop="110873"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U330952" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AACATCGCGCCTTATGCGGCTCTCCTTTCTGTAAGAAACACAGGCCCCGAGATGAGAATGGATTGGGTTCTATTTTGCCCGAGAGTAAACATAAACGCAAGCATGAGGACAATGTCCTTGGATTGGATACCTCAAATTGCAAAGATATTGTTCTCGCTGGAGCATTTGATGCTCCGCTCCAAGTTGATCCTATCTCAGTTCTTCGTGGAGAATCTTGCTATAGGAACAACTTGCTTGAGGTGCCTCAGTATTTGCAGAACAGACCAAGTGGTTCTGAGATGCATTGCATTGGTTTGTGGCCACATGGAAGTGAGCTTTGCATAGAAAGTCCAAAACGACATTCATTATACTGTGAGAAGCATTTACCAAGCTGGCTTAAACGTGCGAGGAATGGCAAGAGTAGGATTATTTCAAAGGAAGTATTCATAGAACTTTTGAAGGATTGCCAGTCCAGGGATCAAAGATTGTATTTACATCAAGCTTGTGAGCTTTTCTATAGACTTCTCAAAAGTTTACTTTCTTTGAGAAACCCAGTTCCAAAAGAAGTGCAATTCCAGTGGGTCATATCTGAAGCTTCTAAAGATCCAATGGTTGGTGAATTCTTAATGAAATTAGTTTGTACTGAAAAACAGAGGCTGAAAAGTGTTTGGGGATTTAGCGCTAGTGAAAATGCACAAGCTTCCTCTTACGTCAAAGAACCAATTCCATTATTAAGGATTACGGATAATGACCAGGATCATTGTGATGTCATAAAGTGCAAAATTTGCTCTGAGACGTTTCCAGATGAGCAAGTGCTTGGCACACACTGGATGGACAGCCACAAAAAGGAAGCCCAATGGCTTTTCAGGGGTTATGCTTGTGCTATCTGTCTGGATTCTTTTACTAATAAGAAAGTTTTGGAAACTCATGTGCAGGAAAGGCACCATTCACAGTTTGTTGAAAATTGCATGCTTTTTCAGTGTATTCCGTGTACTAGCAATTTTGGGAACTCAGAGGAGTTATGGTCCCACGTGCTCACCGCACATCCTTCCAGTTTTAGATGGTCTCATACTGCTCAAGAGAATCATTTTCCTGCAAGTGAGGTTGCATCAGAGAAGCCTGATATAGGCAACTCCTTGTCGACACAGAATTTCAATTCAGAGAACCAGTCTGGTTTCCGAAAATTCATCTGCAGATTTTGTGGCCTGAAATTTGACTTGCTACCTGATCTAGGCCGCCATCATCAGGCTGCTCACATGGGTCCTAATCCTGTTGGCTCTCATATCTCCAAGAAGGGCATCCGTTTATATGCTCATAAATTGAAGTCAGGAAGACTTAGCCGTCCAAAATTCAAGAAGGGTCTCGGATCTGTAGCATATAGGATTAGGAACAGAAATGCTCAGAATATGAAGAGACGCATCCTGTCATCGAACTCCATTATTAGTGGAAAACCTTCGATTCAACCTAGTGCAACCGAGGCAGCTGGTCTAGGTAGACTGGGAGATCCCCACTGCTTAGATATTGCAAAGATATTGTTTGCTG</gDNA_template>
            <first_frame> N  I  A  P  Y  A  A  L  L  S  V  R  N  T  G  P  E  M  R  M  D  W  V  L  F  C  P  R  V  N  I  N  A  S  M  R  T  M  S  L  D  W  I  P  Q  I  A  K  I  L  F  S  L  E  H  L  M  L  R  S  K  L  I  L  S  Q  F  F  V  E  N  L  A  I  G  T  T  C  L  R  C  L  S  I  C  R  T  D  Q  V  V  L  R  C  I  A  L  V  C  G  H  M  E  V  S  F  A  *  K  V  Q  N  D  I  H  Y  T  V  R  S  I  Y  Q  A  G  L  N  V  R  G  M  A  R  V  G  L  F  Q  R  K  Y  S  *  N  F  *  R  I  A  S  P  G  I  K  D  C  I  Y  I  K  L  V  S  F  S  I  D  F  S  K  V  Y  F  L  *  E  T  Q  F  Q  K  K  C  N  S  S  G  S  Y  L  K  L  L  K  I  Q  W  L  V  N  S  *  *  N  *  F  V  L  K  N  R  G  *  K  V  F  G  D  L  A  L  V  K  M  H  K  L  P  L  T  S  K  N  Q  F  H  Y  *  G  L  R  I  M  T  R  I  I  V  M  S  *  S  A  K  F  A  L  R  R  F  Q  M  S  K  C  L  A  H  T  G  W  T  A  T  K  R  K  P  N  G  F  S  G  V  M  L  V  L  S  V  W  I  L  L  L  I  R  K  F  W  K  L  M  C  R  K  G  T  I  H  S  L  L  K  I  A  C  F  F  S  V  F  R  V  L  A  I  L  G  T  Q  R  S  Y  G  P  T  C  S  P  H  I  L  P  V  L  D  G  L  I  L  L  K  R  I  I  F  L  Q  V  R  L  H  Q  R  S  L  I  *  A  T  P  C  R  H  R  I  S  I  Q  R  T  S  L  V  S  E  N  S  S  A  D  F  V  A  *  N  L  T  C  Y  L  I  *  A  A  I  I  R  L  L  T  W  V  L  I  L  L  A  L  I  S  P  R  R  A  S  V  Y  M  L  I  N  *  S  Q  E  D  L  A  V  Q  N  S  R  R  V  S  D  L  *  H  I  G  L  G  T  E  M  L  R  I  *  R  D  A  S  C  H  R  T  P  L  L  V  E  N  L  R  F  N  L  V  Q  P  R  Q  L  V  *  V  D  W  E  I  P  T  A  *  I  L  Q  R  Y  C  L  L </first_frame>
            <second_frame>  T  S  R  L  M  R  L  S  F  L  *  E  T  Q  A  P  R  *  E  W  I  G  F  Y  F  A  R  E  *  T  *  T  Q  A  *  G  Q  C  P  W  I  G  Y  L  K  L  Q  R  Y  C  S  R  W  S  I  *  C  S  A  P  S  *  S  Y  L  S  S  S  W  R  I  L  L  *  E  Q  L  A  *  G  A  S  V  F  A  E  Q  T  K  W  F  *  D  A  L  H  W  F  V  A  T  W  K  *  A  L  H  R  K  S  K  T  T  F  I  I  L  *  E  A  F  T  K  L  A  *  T  C  E  E  W  Q  E  *  D  Y  F  K  G  S  I  H  R  T  F  E  G  L  P  V  Q  G  S  K  I  V  F  T  S  S  L  *  A  F  L  *  T  S  Q  K  F  T  F  F  E  K  P  S  S  K  R  S  A  I  P  V  G  H  I  *  S  F  *  R  S  N  G  W  *  I  L  N  E  I  S  L  Y  *  K  T  E  A  E  K  C  L  G  I  *  R  *  *  K  C  T  S  F  L  L  R  Q  R  T  N  S  I  I  K  D  Y  G  *  *  P  G  S  L  *  C  H  K  V  Q  N  L  L  *  D  V  S  R  *  A  S  A  W  H  T  L  D  G  Q  P  Q  K  G  S  P  M  A  F  Q  G  L  C  L  C  Y  L  S  G  F  F  Y  *  *  E  S  F  G  N  S  C  A  G  K  A  P  F  T  V  C  *  K  L  H  A  F  S  V  Y  S  V  Y  *  Q  F  W  E  L  R  G  V  M  V  P  R  A  H  R  T  S  F  Q  F  *  M  V  S  Y  C  S  R  E  S  F  S  C  K  *  G  C  I  R  E  A  *  Y  R  Q  L  L  V  D  T  E  F  Q  F  R  E  P  V  W  F  P  K  I  H  L  Q  I  L  W  P  E  I  *  L  A  T  *  S  R  P  P  S  S  G  C  S  H  G  S  *  S  C  W  L  S  Y  L  Q  E  G  H  P  F  I  C  S  *  I  E  V  R  K  T  *  P  S  K  I  Q  E  G  S  R  I  C  S  I  *  D  *  E  Q  K  C  S  E  Y  E  E  T  H  P  V  I  E  L  H  Y  *  W  K  T  F  D  S  T  *  C  N  R  G  S  W  S  R  *  T  G  R  S  P  L  L  R  Y  C  K  D  I  V  C   </second_frame>
            <third_frame>   H  R  A  L  C  G  S  P  F  C  K  K  H  R  P  R  D  E  N  G  L  G  S  I  L  P  E  S  K  H  K  R  K  H  E  D  N  V  L  G  L  D  T  S  N  C  K  D  I  V  L  A  G  A  F  D  A  P  L  Q  V  D  P  I  S  V  L  R  G  E  S  C  Y  R  N  N  L  L  E  V  P  Q  Y  L  Q  N  R  P  S  G  S  E  M  H  C  I  G  L  W  P  H  G  S  E  L  C  I  E  S  P  K  R  H  S  L  Y  C  E  K  H  L  P  S  W  L  K  R  A  R  N  G  K  S  R  I  I  S  K  E  V  F  I  E  L  L  K  D  C  Q  S  R  D  Q  R  L  Y  L  H  Q  A  C  E  L  F  Y  R  L  L  K  S  L  L  S  L  R  N  P  V  P  K  E  V  Q  F  Q  W  V  I  S  E  A  S  K  D  P  M  V  G  E  F  L  M  K  L  V  C  T  E  K  Q  R  L  K  S  V  W  G  F  S  A  S  E  N  A  Q  A  S  S  Y  V  K  E  P  I  P  L  L  R  I  T  D  N  D  Q  D  H  C  D  V  I  K  C  K  I  C  S  E  T  F  P  D  E  Q  V  L  G  T  H  W  M  D  S  H  K  K  E  A  Q  W  L  F  R  G  Y  A  C  A  I  C  L  D  S  F  T  N  K  K  V  L  E  T  H  V  Q  E  R  H  H  S  Q  F  V  E  N  C  M  L  F  Q  C  I  P  C  T  S  N  F  G  N  S  E  E  L  W  S  H  V  L  T  A  H  P  S  S  F  R  W  S  H  T  A  Q  E  N  H  F  P  A  S  E  V  A  S  E  K  P  D  I  G  N  S  L  S  T  Q  N  F  N  S  E  N  Q  S  G  F  R  K  F  I  C  R  F  C  G  L  K  F  D  L  L  P  D  L  G  R  H  H  Q  A  A  H  M  G  P  N  P  V  G  S  H  I  S  K  K  G  I  R  L  Y  A  H  K  L  K  S  G  R  L  S  R  P  K  F  K  K  G  L  G  S  V  A  Y  R  I  R  N  R  N  A  Q  N  M  K  R  R  I  L  S  S  N  S  I  I  S  G  K  P  S  I  Q  P  S  A  T  E  A  A  G  L  G  R  L  G  D  P  H  C  L  D  I  A  K  I  L  F  A  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0066K03.2" strand="+"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="109355" stop="110872"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1518</number_coding_nucleotides>
                  <number_encoded_amino_acids>506</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>HRALCGSPFCKKHRPRDENGLGSILPESKHKRKHEDNVLGLDTSNCKDIVLAGAFDAPLQVDPISVLRGESCYRNNLLEVPQYLQNRPSGSEMHCIGLWPHGSELCIESPKRHSLYCEKHLPSWLKRARNGKSRIISKEVFIELLKDCQSRDQRLYLHQACELFYRLLKSLLSLRNPVPKEVQFQWVISEASKDPMVGEFLMKLVCTEKQRLKSVWGFSASENAQASSYVKEPIPLLRITDNDQDHCDVIKCKICSETFPDEQVLGTHWMDSHKKEAQWLFRGYACAICLDSFTNKKVLETHVQERHHSQFVENCMLFQCIPCTSNFGNSEELWSHVLTAHPSSFRWSHTAQENHFPASEVASEKPDIGNSLSTQNFNSENQSGFRKFICRFCGLKFDLLPDLGRHHQAAHMGPNPVGSHISKKGIRLYAHKLKSGRLSRPKFKKGLGSVAYRIRNRNAQNMKRRILSSNSIISGKPSIQPSATEAAGLGRLGDPHCLDIAKILFA</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="107996" e_stop="108062"/>
            <exon e_start="111597" e_stop="111758"/>
            <exon e_start="112039" e_stop="112155"/>
            <exon e_start="112222" e_stop="112325"/>
            <exon e_start="112421" e_stop="112558"/>
            <exon e_start="113763" e_stop="113835"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.784" e_score="0.985"/>
          <exon-intron don_prob="1.000" acc_prob="0.947" e_score="1.000"/>
          <exon-intron don_prob="0.874" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.879" acc_prob="0.990" e_score="0.981"/>
          <exon-intron don_prob="1.000" acc_prob="0.816" e_score="0.986"/>
          <exon-only e_score="0.973"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.985">
            <gDNA_exon_boundary e_start="107996" e_stop="108062" e_length="67"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.784">
            <gDNA_intron_boundary i_start="108063" i_stop="111596" i_length="3534"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="111597" e_stop="111758" e_length="162"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="0.947">
            <gDNA_intron_boundary i_start="111759" i_stop="112038" i_length="280"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="112039" e_stop="112155" e_length="117"/>
          </exon>
          <intron i_serial="3" don_prob="0.874" acc_prob="0.999">
            <gDNA_intron_boundary i_start="112156" i_stop="112221" i_length="66"/>
          </intron>
          <exon e_serial="4" e_score="0.981">
            <gDNA_exon_boundary e_start="112222" e_stop="112325" e_length="104"/>
          </exon>
          <intron i_serial="4" don_prob="0.879" acc_prob="0.990">
            <gDNA_intron_boundary i_start="112326" i_stop="112420" i_length="95"/>
          </intron>
          <exon e_serial="5" e_score="0.986">
            <gDNA_exon_boundary e_start="112421" e_stop="112558" e_length="138"/>
          </exon>
          <intron i_serial="5" don_prob="1.000" acc_prob="0.816">
            <gDNA_intron_boundary i_start="112559" i_stop="113762" i_length="1204"/>
          </intron>
          <exon e_serial="6" e_score="0.973">
            <gDNA_exon_boundary e_start="113763" e_stop="113835" e_length="73"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="107996" stop="108062"/>
              <exon start="111597" stop="111758"/>
              <exon start="112039" stop="112155"/>
              <exon start="112222" stop="112325"/>
              <exon start="112421" stop="112558"/>
              <exon start="113763" stop="113835"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U332301" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GATGGAGTCTTGGATTCAGCACTGTCAGAATGCCGACAGTGCTGAGTCAATTGAAATGCTGAAGGAG : AGTTCCCAATTGGGGTGTGCTTGTCCAAATTCAGCATGCTCTTCTCAAACTTGTGATCATATTTACCTCTTTGATAATGATTACGATGATGCCAAAGATATTTATGGGAAGCCTATGCGTGGAAGGTTCCCATATGATGAGAGAGGTCGGATCATGTTGGAG : GAGGGCTACCTTATCTATGAATGCAATCAATGGTGCTCGTGCAGTAAATCTTGTCAGAATAGGGTTTTACAGAGTGGAGTGCGTGTGAAGCTAGAAATATACAAAACCGAGACAAGG : GGATGGGCAGTCAGGGCAAGAGAAGCAATCCTTCGTGGTACATTTGTGTGTGAATATGTAGGAGAGGTACTTGATGAGCAGGAAGCAAATAAGAGACGCAATAG : GTCTGCCACAGAAGGTTGTGGGTACTTCTTGGAGATAGATGCTCACATCAATGATATGAGCAGACTGATTGAAGGGCAGTCTCCATATGTAATTGATGCTACTAACTATGGAAACATTTCCCGTTATATCAACCACAG : TTGCTCACCAAATCTCGTGAATTACCAAGTTCTCGTGGAAAGCATGGATCATCAGCTTGCACATGTTGGTTTT</gDNA_template>
            <first_frame> D  G  V  L  D  S  A  L  S  E  C  R  Q  C  *  V  N  *  N  A  E  G   : E  F  P  I  G  V  C  L  S  K  F  S  M  L  F  S  N  L  *  S  Y  L  P  L  *  *  *  L  R  *  C  Q  R  Y  L  W  E  A  Y  A  W  K  V  P  I  *  *  E  R  S  D  H  V  G   : G  G  L  P  Y  L  *  M  Q  S  M  V  L  V  Q  *  I  L  S  E  *  G  F  T  E  W  S  A  C  E  A  R  N  I  Q  N  R  D  K   : G  M  G  S  Q  G  K  R  S  N  P  S  W  Y  I  C  V  *  I  C  R  R  G  T  *  *  A  G  S  K  *  E  T  Q  *  :  V  C  H  R  R  L  W  V  L  L  G  D  R  C  S  H  Q  *  Y  E  Q  T  D  *  R  A  V  S  I  C  N  *  C  Y  *  L  W  K  H  F  P  L  Y  Q  P  Q  :  L  L  T  K  S  R  E  L  P  S  S  R  G  K  H  G  S  S  A  C  T  C  W  F  </first_frame>
            <second_frame>  M  E  S  W  I  Q  H  C  Q  N  A  D  S  A  E  S  I  E  M  L  K  E  :  S  S  Q  L  G  C  A  C  P  N  S  A  C  S  S  Q  T  C  D  H  I  Y  L  F  D  N  D  Y  D  D  A  K  D  I  Y  G  K  P  M  R  G  R  F  P  Y  D  E  R  G  R  I  M  L  E  :  E  G  Y  L  I  Y  E  C  N  Q  W  C  S  C  S  K  S  C  Q  N  R  V  L  Q  S  G  V  R  V  K  L  E  I  Y  K  T  E  T  R  :  G  W  A  V  R  A  R  E  A  I  L  R  G  T  F  V  C  E  Y  V  G  E  V  L  D  E  Q  E  A  N  K  R  R  N  R :   S  A  T  E  G  C  G  Y  F  L  E  I  D  A  H  I  N  D  M  S  R  L  I  E  G  Q  S  P  Y  V  I  D  A  T  N  Y  G  N  I  S  R  Y  I  N  H  S :   C  S  P  N  L  V  N  Y  Q  V  L  V  E  S  M  D  H  Q  L  A  H  V  G  F </second_frame>
            <third_frame>   W  S  L  G  F  S  T  V  R  M  P  T  V  L  S  Q  L  K  C  *  R  R :   V  P  N  W  G  V  L  V  Q  I  Q  H  A  L  L  K  L  V  I  I  F  T  S  L  I  M  I  T  M  M  P  K  I  F  M  G  S  L  C  V  E  G  S  H  M  M  R  E  V  G  S  C  W  R :   R  A  T  L  S  M  N  A  I  N  G  A  R  A  V  N  L  V  R  I  G  F  Y  R  V  E  C  V  *  S  *  K  Y  T  K  P  R  Q  G :   D  G  Q  S  G  Q  E  K  Q  S  F  V  V  H  L  C  V  N  M  *  E  R  Y  L  M  S  R  K  Q  I  R  D  A  I   : G  L  P  Q  K  V  V  G  T  S  W  R  *  M  L  T  S  M  I  *  A  D  *  L  K  G  S  L  H  M  *  L  M  L  L  T  M  E  T  F  P  V  I  S  T  T   : V  A  H  Q  I  S  *  I  T  K  F  S  W  K  A  W  I  I  S  L  H  M  L  V   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0066K03.2" strand="+"/>
                <serials PGL_serial="14" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="107997" stop="108062"/>
                    <exon start="111597" stop="111758"/>
                    <exon start="112039" stop="112155"/>
                    <exon start="112222" stop="112325"/>
                    <exon start="112421" stop="112558"/>
                    <exon start="113763" stop="113835"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>660</number_coding_nucleotides>
                  <number_encoded_amino_acids>220</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>MESWIQHCQNADSAESIEMLKESSQLGCACPNSACSSQTCDHIYLFDNDYDDAKDIYGKPMRGRFPYDERGRIMLEEGYLIYECNQWCSCSKSCQNRVLQSGVRVKLEIYKTETRGWAVRAREAILRGTFVCEYVGEVLDEQEANKRRNRSATEGCGYFLEIDAHINDMSRLIEGQSPYVIDATNYGNISRYINHSCSPNLVNYQVLVESMDHQLAHVGF</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="15" PGL_strand="-" PGL_start="116844" PGL_stop="116016"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="116844" e_stop="116016"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.928"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.928">
            <gDNA_exon_boundary e_start="116844" e_stop="116016" e_length="829"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="116844" stop="116016"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U340877" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAAATCTATGTGCCCCTCTAATATTAAAACAGCCTTCATCGTTGTAAAATATATGGGAATGGGACTTCGTTTAAGAATCTGATCATATATATATTCCCGGACATACAATTTTTAATTAAGAGATTTTGAATTTAAATTTTATTTTATTTTATTTTTTTCCGTATTACATTATTTTTACTAGGGAGCATGGAAATTTTGCGGCGCGAATTCTAAATGAAAAACAAAAGAAACAAATAGAGAAGACCTAACTATGAGTATGATCTGTTTACCCAATTTAAAAATCTCGAGGCTCTTTATATTTCATTTTATTTTTAGGACAAATATATGTTGTTGTTCTAATTGAATATATTCGATAAATAAAGTAAACATAAAGGAATTAGAGAAAAATTTGATAATTGAAGTAGTGAAAAATGTAAATTATGGAGTAATACCTGTTAACAGAAAAATTAACAGGAAAGCTGGAGTTTTTTTCTATTCTTAAACTTTTTTTGGAAAAAAGTAGGTTATGCCCAAGGAGTACATAAAGAGCTATATTCTTATTTGTTTTCATCAATTGAATGGGTGCTTGATGATGTGTTGGAAGTGGAAATGGTTGGTAATAGGAGTTGGTCACATTGTACCAATAATAATGGTGGAGATGGTGATGTCAATGTCAAAGGATATAATTATAATGATGGAGTAGTGGATATGGTTGTGATCGACAGTAGTAGTTGACAGTGATAGTGATTGTCAGTGGTGAAACTGGTTGGTATTGTTGATGGTGGTAACCAAAAAATTGTGTGGTGATTGACAATGTGTTGATGGTAAAGGTTGTTTGTAATAGGAATTG</gDNA_template>
            <first_frame> K  I  Y  V  P  L  *  Y  *  N  S  L  H  R  C  K  I  Y  G  N  G  T  S  F  K  N  L  I  I  Y  I  F  P  D  I  Q  F  L  I  K  R  F  *  I  *  I  L  F  Y  F  I  F  F  R  I  T  L  F  L  L  G  S  M  E  I  L  R  R  E  F  *  M  K  N  K  R  N  K  *  R  R  P  N  Y  E  Y  D  L  F  T  Q  F  K  N  L  E  A  L  Y  I  S  F  Y  F  *  D  K  Y  M  L  L  F  *  L  N  I  F  D  K  *  S  K  H  K  G  I  R  E  K  F  D  N  *  S  S  E  K  C  K  L  W  S  N  T  C  *  Q  K  N  *  Q  E  S  W  S  F  F  L  F  L  N  F  F  W  K  K  V  G  Y  A  Q  G  V  H  K  E  L  Y  S  Y  L  F  S  S  I  E  W  V  L  D  D  V  L  E  V  E  M  V  G  N  R  S  W  S  H  C  T  N  N  N  G  G  D  G  D  V  N  V  K  G  Y  N  Y  N  D  G  V  V  D  M  V  V  I  D  S  S  S  *  Q  *  *  *  L  S  V  V  K  L  V  G  I  V  D  G  G  N  Q  K  I  V  W  *  L  T  M  C  *  W  *  R  L  F  V  I  G  I  </first_frame>
            <second_frame>  K  S  M  C  P  S  N  I  K  T  A  F  I  V  V  K  Y  M  G  M  G  L  R  L  R  I  *  S  Y  I  Y  S  R  T  Y  N  F  *  L  R  D  F  E  F  K  F  Y  F  I  L  F  F  S  V  L  H  Y  F  Y  *  G  A  W  K  F  C  G  A  N  S  K  *  K  T  K  E  T  N  R  E  D  L  T  M  S  M  I  C  L  P  N  L  K  I  S  R  L  F  I  F  H  F  I  F  R  T  N  I  C  C  C  S  N  *  I  Y  S  I  N  K  V  N  I  K  E  L  E  K  N  L  I  I  E  V  V  K  N  V  N  Y  G  V  I  P  V  N  R  K  I  N  R  K  A  G  V  F  F  Y  S  *  T  F  F  G  K  K  *  V  M  P  K  E  Y  I  K  S  Y  I  L  I  C  F  H  Q  L  N  G  C  L  M  M  C  W  K  W  K  W  L  V  I  G  V  G  H  I  V  P  I  I  M  V  E  M  V  M  S  M  S  K  D  I  I  I  M  M  E  *  W  I  W  L  *  S  T  V  V  V  D  S  D  S  D  C  Q  W  *  N  W  L  V  L  L  M  V  V  T  K  K  L  C  G  D  *  Q  C  V  D  G  K  G  C  L  *  *  E  L </second_frame>
            <third_frame>   N  L  C  A  P  L  I  L  K  Q  P  S  S  L  *  N  I  W  E  W  D  F  V  *  E  S  D  H  I  Y  I  P  G  H  T  I  F  N  *  E  I  L  N  L  N  F  I  L  F  Y  F  F  P  Y  Y  I  I  F  T  R  E  H  G  N  F  A  A  R  I  L  N  E  K  Q  K  K  Q  I  E  K  T  *  L  *  V  *  S  V  Y  P  I  *  K  S  R  G  S  L  Y  F  I  L  F  L  G  Q  I  Y  V  V  V  L  I  E  Y  I  R  *  I  K  *  T  *  R  N  *  R  K  I  *  *  L  K  *  *  K  M  *  I  M  E  *  Y  L  L  T  E  K  L  T  G  K  L  E  F  F  S  I  L  K  L  F  L  E  K  S  R  L  C  P  R  S  T  *  R  A  I  F  L  F  V  F  I  N  *  M  G  A  *  *  C  V  G  S  G  N  G  W  *  *  E  L  V  T  L  Y  Q  *  *  W  W  R  W  *  C  Q  C  Q  R  I  *  L  *  *  W  S  S  G  Y  G  C  D  R  Q  *  *  L  T  V  I  V  I  V  S  G  E  T  G  W  Y  C  *  W  W  *  P  K  N  C  V  V  I  D  N  V  L  M  V  K  V  V  C  N  R  N   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0066K03.2" strand="-"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="116394" stop="116131"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>261</number_coding_nucleotides>
                  <number_encoded_amino_acids>87</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QESWSFFLFLNFFWKKVGYAQGVHKELYSYLFSSIEWVLDDVLEVEMVGNRSWSHCTNNNGGDGDVNVKGYNYNDGVVDMVVIDSSS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="16" PGL_strand="+" PGL_start="118781" PGL_stop="119334"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="118781" e_stop="119334"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="118781" e_stop="119334" e_length="554"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="118781" stop="119334"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U332095" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="16" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AATTTTTCAATTCATATAGGAGGGGAGCTCATCATTCCACTCTGTTAAATCTCTGATTTGGTGGTTCCCTTCATGCTTGACATCAAAGCTTTCATTCAATCATTTTCAATGCCTCTTCCTTGGACTTTTAAATTAAAAGATTTGGGGTTTTCAAGAAAATCTCAGATAGCTCTCTCTGTTTGTAGTTGAGTATTTGTTGTTTTCTCTATTTCAAGAATTTGGGTGTTTCAAGAATCCCTTTTGTCCTGCCATTTTACACCTTTAGGAGTGGTGAGTTTCAACTCTTCTTTCTTTGTTTCTTGACAACTATACTGTTAAAGGTTTGATCTTTTGTTTTGTTTGCTGTCCTTTTGGAGAACGAAAGAAAGGAACAATTTGTGTTTTTTTTATTGTTAAGTGTTGGAGTAGTAGCTATCTTTTATCAGAGGGGAAAAGATTAGCTCTTTGATGTTTTGTCCTAATTAGTAGATATTCATTCTTATGATCAAAGAGTTCCTTAGTTCTGTGTAGTCAACCTGATTTCAATTTCATCATCCCTTAAGTAAAAAAAATGC</gDNA_template>
            <first_frame> N  F  S  I  H  I  G  G  E  L  I  I  P  L  C  *  I  S  D  L  V  V  P  F  M  L  D  I  K  A  F  I  Q  S  F  S  M  P  L  P  W  T  F  K  L  K  D  L  G  F  S  R  K  S  Q  I  A  L  S  V  C  S  *  V  F  V  V  F  S  I  S  R  I  W  V  F  Q  E  S  L  L  S  C  H  F  T  P  L  G  V  V  S  F  N  S  S  F  F  V  S  *  Q  L  Y  C  *  R  F  D  L  L  F  C  L  L  S  F  W  R  T  K  E  R  N  N  L  C  F  F  Y  C  *  V  L  E  *  *  L  S  F  I  R  G  E  K  I  S  S  L  M  F  C  P  N  *  *  I  F  I  L  M  I  K  E  F  L  S  S  V  *  S  T  *  F  Q  F  H  H  P  L  S  K  K  N   </first_frame>
            <second_frame>  I  F  Q  F  I  *  E  G  S  S  S  F  H  S  V  K  S  L  I  W  W  F  P  S  C  L  T  S  K  L  S  F  N  H  F  Q  C  L  F  L  G  L  L  N  *  K  I  W  G  F  Q  E  N  L  R  *  L  S  L  F  V  V  E  Y  L  L  F  S  L  F  Q  E  F  G  C  F  K  N  P  F  C  P  A  I  L  H  L  *  E  W  *  V  S  T  L  L  S  L  F  L  D  N  Y  T  V  K  G  L  I  F  C  F  V  C  C  P  F  G  E  R  K  K  G  T  I  C  V  F  F  I  V  K  C  W  S  S  S  Y  L  L  S  E  G  K  R  L  A  L  *  C  F  V  L  I  S  R  Y  S  F  L  *  S  K  S  S  L  V  L  C  S  Q  P  D  F  N  F  I  I  P  *  V  K  K  M  </second_frame>
            <third_frame>   F  F  N  S  Y  R  R  G  A  H  H  S  T  L  L  N  L  *  F  G  G  S  L  H  A  *  H  Q  S  F  H  S  I  I  F  N  A  S  S  L  D  F  *  I  K  R  F  G  V  F  K  K  I  S  D  S  S  L  C  L  *  L  S  I  C  C  F  L  Y  F  K  N  L  G  V  S  R  I  P  F  V  L  P  F  Y  T  F  R  S  G  E  F  Q  L  F  F  L  C  F  L  T  T  I  L  L  K  V  *  S  F  V  L  F  A  V  L  L  E  N  E  R  K  E  Q  F  V  F  F  L  L  L  S  V  G  V  V  A  I  F  Y  Q  R  G  K  D  *  L  F  D  V  L  S  *  L  V  D  I  H  S  Y  D  Q  R  V  P  *  F  C  V  V  N  L  I  S  I  S  S  S  L  K  *  K  K  C </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02SLm0066K03.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 43 chains have been computed
$ 
$ memory statistics:
$ 253192 bytes spliced alignments in total
$ 21 spliced alignments have been stored
$ 12056 bytes was the average size of a spliced alignment
$ 25320 bytes predicted gene locations in total
$ 16 predicted gene locations have been stored
$ 1582 bytes was the average size of a predicted gene location
$ 5 megabytes was the average size of the backtrace matrix
$ 52 backtrace matrices have been allocated
$ 
$ date finished: 2006-11-17 22:19:34
-->
