<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-12-01 08:14:19"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C02HBa0011O23-NiWuT/GenomeThreader_SGN_U_tomato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C02HBa0011O23-NiWuT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0011O23-NiWuT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U570974" ref_strand="+" ref_description="SGN-U570974 Tomato 200607#2 [6 ESTs aligned] (*GB) gi|157345409|emb|CAO14707.1| (e_value=2e-31) unnamed; (*ATH) AT5G40470.1 (e_value=4e-17) | Symbol: None | expressed protein | chr5:16225237-16227125 REVERSE | Aliases: K21I16.4, K21I16_4; ">
      <seq>gtgttgagtatggattctatactctgtgatgaacttctccaagaaatattccgccgccttcctccaccgtctgccgcctctgtttctttagtctgtaagcggtggcttcatcttcttcgttcttcaactacttctctttctatctgttttattgaaacccctttgatccctcttttctcatcttttctcagttttcatccttttttatctactctttctgttaccattacacatacactagattcctctgatcaattgcttaattccgttgcttcttcttgccctaacctacgacatctccgattcttgaatggctctgtttctactttatctctgttttctctttctgtttcttgccctaatcttgtttctcttgctgtaactctttttagacccctttcttttctctgggtaaccccttttggctgtcttaaagaactctctatttactcagctggaaattcaggggaatttgattatggggagttttatggttcttgtgagttgaatttggagagtcttttgttgactggaattaaatcaggggataagggggttggttttttatggaggaattgcaaaaaggtaacaactttgaagctgataagctgtgaaggggttggtgatcaaggttcttttttaacatttcttcagtgtttagagggtcttcaagaattggaattgagaacttgtaggacaattgctgatggggttttgtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0011O23-NiWuT/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0011O23.1" temp_strand="-" temp_description="C02HBa0011O23.1  AC215354.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0011O23 sequenced_by:kribb upload_account_name:korea">
        <position start="2231" stop="913"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="1931" g_stop="1213" g_length="719"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="719" r_length="719" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0011O23.1" gen_strand="-" ref_id="SGN-U570974" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>719</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0011O23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U570974" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="1931" e_stop="1213"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGTTGAGTATGGATTCTATACTCTGTGATGAACTTCTCCAAGAAATATTCCGCCGCCTTCCTCCACCGTCTGCCGCCTCTGTTTCTTTAGTCTGTAAGCGGTGGCTTCATCTTCTTCGTTCTTCAACTACTTCTCTTTCTATCTGTTTTATTGAAACCCCTTTGATCCCTCTTTTCTCATCTTTTCTCAGTTTTCATCCTTTTTTATCTACTCTTTCTGTTACCATTACACATACACTAGATTCCTCTGATCAATTGCTTAATTCCGTTGCTTCTTCTTGCCCTAACCTACGACATCTCCGATTCTTGAATGGCTCTGTTTCTACTTTATCTCTGTTTTCTCTTTCTGTTTCTTGCCCTAATCTTGTTTCTCTTGCTGTAACTCTTTTTAGACCCCTTTCTTTTCTCTGGGTAACCCCTTTTGGCTGTCTTAAAGAACTCTCTATTTACTCAGCTGGAAATTCAGGGGAATTTGATTATGGGGAGTTTTATGGTTCTTGTGAGTTGAATTTGGAGAGTCTTTTGTTGACTGGAATTAAATCAGGGGATAAGGGGGTTGGTTTTTTATGGAGGAATTGCAAAAAGGTAACAACTTTGAAGCTGATAAGCTGTGAAGGGGTTGGTGATCAAGGTTCTTTTTTAACATTTCTTCAGTGTTTAGAGGGTCTTCAAGAATTGGAATTGAGAACTTGTAGGACAATTGCTGATGGGGTTTTGTT</genome_strand>
        <mrna_strand>GTGTTGAGTATGGATTCTATACTCTGTGATGAACTTCTCCAAGAAATATTCCGCCGCCTTCCTCCACCGTCTGCCGCCTCTGTTTCTTTAGTCTGTAAGCGGTGGCTTCATCTTCTTCGTTCTTCAACTACTTCTCTTTCTATCTGTTTTATTGAAACCCCTTTGATCCCTCTTTTCTCATCTTTTCTCAGTTTTCATCCTTTTTTATCTACTCTTTCTGTTACCATTACACATACACTAGATTCCTCTGATCAATTGCTTAATTCCGTTGCTTCTTCTTGCCCTAACCTACGACATCTCCGATTCTTGAATGGCTCTGTTTCTACTTTATCTCTGTTTTCTCTTTCTGTTTCTTGCCCTAATCTTGTTTCTCTTGCTGTAACTCTTTTTAGACCCCTTTCTTTTCTCTGGGTAACCCCTTTTGGCTGTCTTAAAGAACTCTCTATTTACTCAGCTGGAAATTCAGGGGAATTTGATTATGGGGAGTTTTATGGTTCTTGTGAGTTGAATTTGGAGAGTCTTTTGTTGACTGGAATTAAATCAGGGGATAAGGGGGTTGGTTTTTTATGGAGGAATTGCAAAAAGGTAACAACTTTGAAGCTGATAAGCTGTGAAGGGGTTGGTGATCAAGGTTCTTTTTTAACATTTCTTCAGTGTTTAGAGGGTCTTCAAGAATTGGAATTGAGAACTTGTAGGACAATTGCTGATGGGGTTTTGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0011O23-NiWuT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U604209" ref_strand="+" ref_description="SGN-U604209 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>catgtatctgcgtctttcctccattaactgttttgtgacaatgtcagattttctttgaattcttgcctgcattccttttgaagaaaaatcaagaacttatccatctttttgaagttacacctgtattctaaggcatatttacaagaaataatgaaatttttattttcaagaatatattgacattgcaaatataaagatattcaagaaaactttctttctccaaaaaattctgttgtttttcgtactgtgtgttgaagatgttctagaatttgtttttgaagctttttatcttgtatgatttcagaagggttggtcgttgtagtcataggattgcatgcattactcaactaataagccgttctggcggtttgtgttcattggtttgcgtata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0011O23-NiWuT/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0011O23.1" temp_strand="+" temp_description="C02HBa0011O23.1  AC215354.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0011O23 sequenced_by:kribb upload_account_name:korea">
        <position start="63447" stop="64619"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="63747" g_stop="64057" g_length="311"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="311" r_length="311" r_score="0.974"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64058" i_stop="64239" i_length="182">
            <donor d_prob="0.000" d_score="0.96"/>
            <acceptor a_prob="0.000" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="64240" g_stop="64319" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="312" r_stop="391" r_length="80" r_score="0.938"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0011O23.1" gen_strand="+" ref_id="SGN-U604209" ref_strand="+">
        <total_alignment_score>0.967</total_alignment_score>
        <cumulative_length_of_scored_exons>391</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0011O23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U604209" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="63747" e_stop="64057"/>
          <exon e_start="64240" e_stop="64319"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATGTATCTGCGTCTTTCCTCCATTAACTGTTTTGTGACAATGTCAGATTTTCTTTGAATTCTTGCCTGCATTCCTTTT-AAGAAAAATCAAGAACTTATCCATCTTTTTGAAGTTACACCTGTATTCTTAAGGCATATTTACAGGAAATAATGAAATTGTTATTTTCAAGAATATATTGACATTGCAAATATAAAGAAATTCAAGAAAACTTTCTTTCTCCAAAAAATTCTGTTGTTTTTCGTACTGTGTGTTGAAGATGTTCTAGAATTTGTTTTTGAGCCTTTTTATCTTGTATGATTTCAGAAGGGTTGTTGAGGAGTTGGTTTTAACAGCCGTAGGAATTGAATGTTGTGGAGTTGTTCTTGAAGTCCCACTCACACAACTTTTAAAGATAGTGTACTGATGTTCTTGATGCTGACATCATCTTTTCTATTGTATTGATGCCTGTACATAATTTCTTTGCCCAACAACTATGTGTACATAACTTGGAATGGTCGTTGTAGCCATAGGATTGCATGCATTACTCAACTAATAGGCCGCTCTGGCGGTTTGTATTCATTGGTTTGCATATA</genome_strand>
        <mrna_strand>CATGTATCTGCGTCTTTCCTCCATTAACTGTTTTGTGACAATGTCAGATTTTCTTTGAATTCTTGCCTGCATTCCTTTTGAAGAAAAATCAAGAACTTATCCATCTTTTTGAAGTTACACCTGTATTC-TAAGGCATATTTACAAGAAATAATGAAATTTTTATTTTCAAGAATATATTGACATTGCAAATATAAAGATATTCAAGAAAACTTTCTTTCTCCAAAAAATTCTGTTGTTTTTCGTACTGTGTGTTGAAGATGTTCTAGAATTTGTTTTTGAAGCTTTTTATCTTGTATGATTTCAGAAGGGTT......................................................................................................................................................................................GGTCGTTGTAGTCATAGGATTGCATGCATTACTCAACTAATAAGCCGTTCTGGCGGTTTGTGTTCATTGGTTTGCGTATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0011O23-NiWuT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U586042" ref_strand="+" ref_description="SGN-U586042 Tomato 200607#2 [4 ESTs aligned] ">
      <seq>gaattgagtttcacattggcccgctttgagaaaagggacatagctgaggtcaacgaacccagttttctctcaagtaagaagaatgcaggacaaaacccttcgcctcaatggttttgcctatcggaaagctgacaacaagaattctctttggaagttgaagggcattaatctcaacggaaaaagggggaaacgtgacgacaagctacaatctgtaacagatttcatccaagagaacagccggaaactagaagaagcaacatcagggccaggcggcggtttcggaattggctgtggcgtcggtgtgggtctaggagcaattggtggtctagggttaggtggttccgattggaaccatctcaaactcgttttcggagtgggtatgggttgtggtcttggtatcggcttcgggtatggccaaggaattggtgttggcttttcttgggaagaatttaagtctagattttttgaatccaaaaggagttccagaaagccctttgtaattcaaatctgaactcttttttggctatcatttccaattttttctatttccataagctgcttctttgcaattttgttgtggtaaaagagaatattgttatttgtgcttcacgaaaatgttctctaaacttgatgttacatgtaacactatcatacatctctcacctaaaacgctacaaaagtttgagcaacttgtacaataagaaaaaaatttacaatttttacatgcatatgtaaagcatttgccctgtgatcagtgtggcaagaatgaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0011O23-NiWuT/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0011O23.1" temp_strand="+" temp_description="C02HBa0011O23.1  AC215354.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0011O23 sequenced_by:kribb upload_account_name:korea">
        <position start="71895" stop="73260"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72199" g_stop="72960" g_length="762"/>
          <reference_exon_boundary r_type="cDNA" r_start="9" r_stop="770" r_length="762" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0011O23.1" gen_strand="+" ref_id="SGN-U586042" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>762</cumulative_length_of_scored_exons>
        <coverage percentage="0.990" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0011O23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U586042" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72199" e_stop="72960"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCACATTGGCCCGCTTTGAGAAAAGGGACATAGCTGAGGTCAACGAACCCAGTTTTCTCTCAAGTAAGAAGAATGCAGGACAAAACCCTTCGCCTCAATGGTTTTGCCTATCGGAAAGCTGACAACAAGAATTCTCTTTGGAAGTTGAAGGGCATTAATCTCAACGGAAAAAGGGGGAAACGTGACGACAAGCTACAATCTGTAACAGATTTCATCCAAGAGAACAGCCGGAAACTAGAAGAAGCAACATCAGGGCCAGGCGGCGGTTTCGGAATTGGCTGTGGCGTCGGTGTGGGTCTAGGAGCAATTGGTGGTCTAGGGTTAGGTGGTTCCGATTGGAACCATCTCAAACTCGTTTTCGGAGTGGGTATGGGTTGTGGTCTTGGTATCGGCTTCGGGTATGGCCAAGGAATTGGTGTTGGCTTTTCTTGGGAAGAATTTAAGTCTAGATTTTTTGAATCCAAAAGGAGTTCCAGAAAGCCCTTTGTAATTCAAATCTGAACTCTTTTTTGGCTATCATTTCCAATTTTTTCTATTTCCATAAGCTGCTTCTTTGCAATTTTGTTGTGGTAAAAGAGAATATTGTTATTTGTGCTTCACGAAAATGTTCTCTAAACTTGATGTTACATGTAACACTATCATACATCTCTCACCTAAAACGCTACAAAAGTTTGAGCAACTTGTACAATAAGAAAAAAATTTACAATTTTTACATGCATATGTAAAGCATTTGCCCTGTGATCAGTGTGGCAAGAATGAA</genome_strand>
        <mrna_strand>TTTCACATTGGCCCGCTTTGAGAAAAGGGACATAGCTGAGGTCAACGAACCCAGTTTTCTCTCAAGTAAGAAGAATGCAGGACAAAACCCTTCGCCTCAATGGTTTTGCCTATCGGAAAGCTGACAACAAGAATTCTCTTTGGAAGTTGAAGGGCATTAATCTCAACGGAAAAAGGGGGAAACGTGACGACAAGCTACAATCTGTAACAGATTTCATCCAAGAGAACAGCCGGAAACTAGAAGAAGCAACATCAGGGCCAGGCGGCGGTTTCGGAATTGGCTGTGGCGTCGGTGTGGGTCTAGGAGCAATTGGTGGTCTAGGGTTAGGTGGTTCCGATTGGAACCATCTCAAACTCGTTTTCGGAGTGGGTATGGGTTGTGGTCTTGGTATCGGCTTCGGGTATGGCCAAGGAATTGGTGTTGGCTTTTCTTGGGAAGAATTTAAGTCTAGATTTTTTGAATCCAAAAGGAGTTCCAGAAAGCCCTTTGTAATTCAAATCTGAACTCTTTTTTGGCTATCATTTCCAATTTTTTCTATTTCCATAAGCTGCTTCTTTGCAATTTTGTTGTGGTAAAAGAGAATATTGTTATTTGTGCTTCACGAAAATGTTCTCTAAACTTGATGTTACATGTAACACTATCATACATCTCTCACCTAAAACGCTACAAAAGTTTGAGCAACTTGTACAATAAGAAAAAAATTTACAATTTTTACATGCATATGTAAAGCATTTGCCCTGTGATCAGTGTGGCAAGAATGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0011O23-NiWuT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U569873" ref_strand="+" ref_description="SGN-U569873 Tomato 200607#2 [3 ESTs aligned] (*GB) gi|9621903|gb|AAF89579.1|AF165891_1 (e_value=3e-81) phosphatidic; (*ATH) AT3G02600.1 (e_value=7e-82) | Symbol: LPP3 | Encodes phosphatidic acid phosphatase. Expressed during germination. | chr3:551358-554678 FORWARD | Aliases: F16B3.23, F16B3_23, LPP3, ATLPP3; (*SWP) sp|Q8LFD1|LPP3_ARATH (e_value=7e-81) Putative lipid phosphate phosphatase 3, chloroplastic OS=Arabidopsis thaliana GN=LPP3; ">
      <seq>ttcttcttccttgctacttcacatcatcactgctgtttttgttattttttccgcttacagaatcagtgtagctgtgaattataaatggtgaaactatagctgaagtgtactacttcctttgtttattagttacaattcatcgtggataaggactttatttaaaaaatattgtgtggacatacgtgtttttgtgcttgcttttttatatgtggaatctggatcttgctgtcactgtcgtcaatactgttcttatttattaagtattacttttaattaattgttttgattcattattaataatcagggttcccttccattttctaatttcgattcatttattgctttgaatcgacaatgccatggtgggatttgagatctgttttcgttttcaagaatttcagatgcttttcgcagtctcagaacggattaagtcaaaggttggaaacttctgctggattttctcaactgttccggccgttgatagcccacaagaaacaccagggtagaatgagggatgcccagcctggatcacatactgtgagcgtgaggtctcatggtgtgacggttgcatcatatacagtgaggtcccatggtataacagtggcaaggactcatttaaatgactggatgatcctaatactacttttggggatagttgtccttctgaatgttatccatccgttttaccggtttgttgggaaagacatgatggaagacctcaagtatcctttaaaaagtaatactgtacctttttgggctgtgccagtgtatgctgttctgctgcctatggttgtatttctgctcatttattttcggcgaacagatgtctatgatcttcatcatgccatactgggccttttgttctctgttgaggtaacagctgttatcacaggtgctataaaagatgcacttggaaggcctaagccaaactccttctggcgctgttttccaaatggaaaggaagtttacgaaaaatgggaagatgttgtatgccatggtgacaaaaatgttgtcagggaagggcaaaaaagttttccaagtggtcatacctccttgtcctttgctggtcttggctttctatcgctttatttatctggcaagatacaagtctttgactgtagaggacatgttgctaaactgtgtctcgtattacttccacttcttcttgcatctctggttgccatttctcgggtggatgactattggcatcattggcaggatgtgtttgctggaggtctgattggtct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0011O23-NiWuT/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0011O23.1" temp_strand="-" temp_description="C02HBa0011O23.1  AC215354.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0011O23 sequenced_by:kribb upload_account_name:korea">
        <position start="76980" stop="73743"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76680" g_stop="76261" g_length="420"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="420" r_length="420" r_score="0.990"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76260" i_stop="75993" i_length="268">
            <donor d_prob="0.912" d_score="1.00"/>
            <acceptor a_prob="0.745" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="75992" g_stop="75912" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="421" r_stop="501" r_length="81" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="75911" i_stop="75226" i_length="686">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="75225" g_stop="74962" g_length="264"/>
          <reference_exon_boundary r_type="cDNA" r_start="502" r_stop="765" r_length="264" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="74961" i_stop="74872" i_length="90">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.167" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="74871" g_stop="74784" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="766" r_stop="853" r_length="88" r_score="0.989"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="74783" i_stop="74681" i_length="103">
            <donor d_prob="0.941" d_score="0.98"/>
            <acceptor a_prob="0.969" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="74680" g_stop="74571" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="854" r_stop="963" r_length="110" r_score="0.945"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="74570" i_stop="74462" i_length="109">
            <donor d_prob="0.971" d_score="0.92"/>
            <acceptor a_prob="0.971" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="74461" g_stop="74371" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="964" r_stop="1054" r_length="91" r_score="0.967"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="74370" i_stop="74234" i_length="137">
            <donor d_prob="0.301" d_score="0.98"/>
            <acceptor a_prob="0.223" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="74233" g_stop="74045" g_length="189"/>
          <reference_exon_boundary r_type="cDNA" r_start="1055" r_stop="1243" r_length="189" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0011O23.1" gen_strand="-" ref_id="SGN-U569873" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>1243</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0011O23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U569873" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76680" e_stop="76261"/>
          <exon e_start="75992" e_stop="75912"/>
          <exon e_start="75225" e_stop="74962"/>
          <exon e_start="74871" e_stop="74784"/>
          <exon e_start="74680" e_stop="74571"/>
          <exon e_start="74461" e_stop="74371"/>
          <exon e_start="74233" e_stop="74045"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCTTCTTCCTTGCTACTTCACATCATCACTGCTGTTTTTGTTATTTTTTCTGCTTACAGAATCAGTGTAGCTGTGAATTATAAATGGTGAAACTATAGCTGAAGTGTACTACTTCCTTTGTTTATTAGTTACAATTCATCGTGGATAAGGACTTTATTTAAAAAATATTGTGTGGACATACGTGTTTTTGTGCTTGCTTTTTTATATGTGGAATCTGGATCTTGCTGTCACTGTCGTCAATACTGTTCTTATTTATTAAGTATTACTTTTAATTAATTGTTTTGATTCATTATTAATAATCAGGGTTTCTTTCCATTTTCTAATTTTGATTCATTTATTGCTTTGAATCGACAATGCCATGGTGGGATTTGAGATCTGTTTTCGTTTTCAAGAATTTCAGATGCTTTTCGCAGTCTCAGGTGCGTAAGGATTATCTGCTATGTTTTGATAACGGCGACTGTAATTTATGCCCATGTTTGATCTAACGCTTTATCTATTCCCAAGATTGGTGACTTTACTCAAATGTTATGGCTAATTCTCCTGTACTGGAAAGTGTCAAGTTCTTAGATTTAGTTGCACTGTAGTAGTTGCAAAATGCTAAAAGGAATACTTATGATGTTAATGATATTTAGCTTTTTGCTATTGAGGCAATGATAAGTTTGATTTTTTTTTTCGGCTTTCAATCAGAACGGATTAAGTCAAAGGTTGGAAACTTCTGCTGGATTTTCTCAACTGTTCCGGCCGTTGATAGCCCACAAGAAACACCAGGTATATATTTCTCACATTTGATGTAGTTAAAGGAATTGGGATGAAAGTGAGTAGCTAGAATGGGTTTTTATTCCATCCATAGCATATTATATACAAGACTTGAGATGAAAGAAGGGGATGGATAAGTTTGGAAATGATTTTGGGTGAGATAATTGCGAACTCAATAGATTGGAACGTCCTGTGAACTATCTTGAGTCACGCACATCTAGTGTGAACAAATAAAATGAACTTTGGCTAATTTCAAACTGCCATTTGCACCTAGACAAAACTATTTTTAGATGGATCATGAGCCATGTATTCAATTTATGGGAATATGCTTGAGTTCTTTTGTAGGCATGTCATGCTTGCTTTACCATTCTGACCAACGTCTACCCCTGAATACTGATACAGTCTACCTTAGGATGTTGTTTTGTTTATTTCTATAAACAAAATTATAGTCTCGACTATATAAAGCACACTTCTGTAGATGTGGCAATCTGTTTTTTTACCTTGTAGGATGAAATAAAAATCCACCTGCACATATAACAGATGTCTAATGCAAATGACCTTGTTATAGCTCTGAAAAATTTAGAGAAGGAGATTATCTTGTGTTTATATATGCAGCTTATTACAAATTTAGAACAAATAAGTCTTTGCAATCATATTAAAAGAATACTCAATTTCTTACTTCTACATGTTCTTAGCAGGGTAGAATGAGGGATGCCCAGCCTGGATCACATACTGTGAGCGTGAGGTCTCATGGTGTGACGGTTGCATCATATACAGTGAGGTCCCATGGTATAACAGTGGCAAGGACTCATTTAAATGACTGGATGATCCTAATACTACTTTTGGGGATAGTTGTCCTTCTGAATGTTATCCATCCGTTTTACCGGTTTGTTGGGAAAGACATGATGGAAGACCTCAAGTATCCTTTAAAAAGTAATACTGTACCTTTTTGGGCTGTGCCAGTGAGTTGATCCTCATTTTTCATTCAGTAGCTACAAAATTACTTTATAGAGGCGATTAGTACCTCATATTCAGATTTCTAAATTTATCAGGTGTATGCTGTTCTGCTGCCTATGGTTGTATTTCTGCTCATTTATTTTCGGCGAAGAGATGTCTATGATCTTCATCATGCCATACTGGGTAAACTATTCTTTGGATTTGGCTAGTTTTAGTGGAAGTTGTTTATAATGTCCTCACCATAAAAGCTTTCTGGTTGTCGTCCTCTAATATGTTGTATTGGCAGGCCTTTTGTTCTCTGTTGTGGTAACAGCTGTTATCACAGGTGCTATAAAAGATGCAGTTGGAAGGCCTAGGCCAGACTTCTTCTGGCGCTGTTTTCCAGATGGAAAGGAAGTATGTTTGCCATGATGGTTATACTTTATGTTTCTAGTTGTAGTCTAAGGCTTCTCAGTTTTGGGGAGTAGTATTTTAACAGCGCCTTTAAATATTGATTGATCAACAGGTTTACGATAAATGGGGAGATGTTGTATGCCATGGTGACAAAAATGTTGTCAGGGAAGGGCATAAAAGTTTTCCAAGTGGTCATACCTCCTGTAAGTAGAATGCATGTTCATTAACGTTGCCTTGTAGAGCAAAAGAACGCGTGGAGACAGACTTGAAATTTACAGCATACGTATTTTGATTCTTTCTCGTCTTCTCAACCTTTTGAGGATTTCGGATCAACTTGCAGTGTCCTTTGCTGGTCTTGGCTTTCTATCGCTTTATTTATCTGGCAAGATACAAGTCTTTGACTGTAGAGGACATGTTGCTAAACTGTGTCTCGTATTACTTCCACTTCTTCTTGCATCTCTGGTTGCCATTTCTCGGGTGGATGACTATTGGCATCATTGGCAGGATGTGTTTGCTGGAGGTCTGATTG</genome_strand>
        <mrna_strand>TTCTTCTTCCTTGCTACTTCACATCATCACTGCTGTTTTTGTTATTTTTTCCGCTTACAGAATCAGTGTAGCTGTGAATTATAAATGGTGAAACTATAGCTGAAGTGTACTACTTCCTTTGTTTATTAGTTACAATTCATCGTGGATAAGGACTTTATTTAAAAAATATTGTGTGGACATACGTGTTTTTGTGCTTGCTTTTTTATATGTGGAATCTGGATCTTGCTGTCACTGTCGTCAATACTGTTCTTATTTATTAAGTATTACTTTTAATTAATTGTTTTGATTCATTATTAATAATCAGGGTTCCCTTCCATTTTCTAATTTCGATTCATTTATTGCTTTGAATCGACAATGCCATGGTGGGATTTGAGATCTGTTTTCGTTTTCAAGAATTTCAGATGCTTTTCGCAGTCTCAG............................................................................................................................................................................................................................................................................AACGGATTAAGTCAAAGGTTGGAAACTTCTGCTGGATTTTCTCAACTGTTCCGGCCGTTGATAGCCCACAAGAAACACCAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTAGAATGAGGGATGCCCAGCCTGGATCACATACTGTGAGCGTGAGGTCTCATGGTGTGACGGTTGCATCATATACAGTGAGGTCCCATGGTATAACAGTGGCAAGGACTCATTTAAATGACTGGATGATCCTAATACTACTTTTGGGGATAGTTGTCCTTCTGAATGTTATCCATCCGTTTTACCGGTTTGTTGGGAAAGACATGATGGAAGACCTCAAGTATCCTTTAAAAAGTAATACTGTACCTTTTTGGGCTGTGCCA..........................................................................................GTGTATGCTGTTCTGCTGCCTATGGTTGTATTTCTGCTCATTTATTTTCGGCGAACAGATGTCTATGATCTTCATCATGCCATACTGG.......................................................................................................GCCTTTTGTTCTCTGTTGAGGTAACAGCTGTTATCACAGGTGCTATAAAAGATGCACTTGGAAGGCCTAAGCCAAACTCCTTCTGGCGCTGTTTTCCAAATGGAAAGGAA.............................................................................................................GTTTACGAAAAATGGGAAGATGTTGTATGCCATGGTGACAAAAATGTTGTCAGGGAAGGGCAAAAAAGTTTTCCAAGTGGTCATACCTCCT.........................................................................................................................................TGTCCTTTGCTGGTCTTGGCTTTCTATCGCTTTATTTATCTGGCAAGATACAAGTCTTTGACTGTAGAGGACATGTTGCTAAACTGTGTCTCGTATTACTTCCACTTCTTCTTGCATCTCTGGTTGCCATTTCTCGGGTGGATGACTATTGGCATCATTGGCAGGATGTGTTTGCTGGAGGTCTGATTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0011O23-NiWuT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U600969" ref_strand="+" ref_description="SGN-U600969 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>gacaaggtgataatttgagtgcaatcggagggagtgctggagatgccaaacaaacattgcattgcccaggtggttcagtgccctagtctatggatttggagacgagctcttcatttgggtcgaccagttcttccatttctatgtctaatatgcctgctattggagttcaagccgaggatggtggcgtcaatttgcaggacaaaagagtgagagtgccctcatcatcagcttcaatagagagcgatagtatcatgggaggtgcgggttttcaacctaaagttggaattcaccaagaaccacttattcaagttatgtccagtatggcctcccacagtctcttcgaagcagaaggctccaatgccagtccctctctcattcagacgccaaaaatggttcaggtttgtgggtatccactacctcagacattggatgggaagcagccccaacctggaattcagtatgttcatggcggtgcctgttatgtacctcattatcct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0011O23-NiWuT/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0011O23.1" temp_strand="+" temp_description="C02HBa0011O23.1  AC215354.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0011O23 sequenced_by:kribb upload_account_name:korea">
        <position start="82244" stop="84276"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82544" g_stop="82784" g_length="241"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="241" r_length="241" r_score="0.963"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82785" i_stop="83720" i_length="936">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="83721" g_stop="83976" g_length="256"/>
          <reference_exon_boundary r_type="cDNA" r_start="242" r_stop="497" r_length="256" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0011O23.1" gen_strand="+" ref_id="SGN-U600969" ref_strand="+">
        <total_alignment_score>0.980</total_alignment_score>
        <cumulative_length_of_scored_exons>497</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0011O23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U600969" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82544" e_stop="82784"/>
          <exon e_start="83721" e_stop="83976"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GACAAGGTGATAATTTGAGTGCAATCGGAGGGAGTGCTGGAGATGCCAAGCAAACATTGGATTTTGGTGGTGGTTCAGTGCCCGAGTCTATGGTTTTGGAGACGAGCTCTTCATTTGGGTCGACCAGTTCTTCCATTTCTATGTCTAATATGCCTGCTATTGGAGTTCAAGCCGAGGATGGTGGCGTCAATTTGCAGGACAAAAGAGTGAGAGTGCCCTCATCATCAGCTTCAATAGAGAGGTACTATTTTCTTTTTTTCTATTTGATGTTACTGTTTGTTTTCTAGTTATGCTATTGGAGTCATTGATGCTATGTAGGTTAACAAAAGTTTAGATTTTTGGTTGACCTACTGGTTTTATGGGTTGAGTTCTGCACCAATACCTGTGCTATGTAAGTAAGTACTTTTTCTTTTTTATGACAACGGAAATCCGCAGCCGCTAACTTTTGGGTGCGTACAGGGTAAACCTCGTTTCTATGTCATAGCTCGCAAACCACATAGGAGAGCTAATCCGCACTAGGCAAGCCTTGTGCGATGAGCTCGACCCAGAAGGCAAACCCCTTGTTTTCGCTGGCAAGGGGTTTCAAACTTGAGACCTCCAACATGGAAGTCCCAAGATCAAGTATTTTTGTTTCAATTGGATTCTACTTCCCTGTGACAATAGAAGAGAAAGGTAGTAAGGTGACGAGGAACATATTGATTTATATTTTTGACTTACAGGGTCTTTTTTTTTCACTTTGTTAAGAGTTACAAATTAGTGTAATGAATCCACAGTAGAATTTCATTGGGGATTAACTGACAGCCCTCCCCAAAAGGAAGAGAAATCATTAGTTTCTACAGTGTAGTATGCTTTGGCCTGTATTCTAGCTTGTTATGCTATTTGTATGGTTACTGTAGTGTTATGAACTGACAGTCTGTTTTCTGGATTGCTTTAGTTCAGTTTATTCACTTGTAAGCCGCTCTTTTCCTCTTTATTATTCACAGAAGAAGACTTCTAAGGTTTCTTGAGCTGATGAATCTATATGCTCAAGTTAGTGGTGGCGTTTTCATTGATTGCTCGTTGAGAATACACTTTAACACTAAAAATAAGATACATGCATTTATTTGGATCTGTTCCTTACATTAGGTTGCCTCTAAAATCTGTACTTATGGGCCTCTGTATTGGTTAATTTCCACAGCGATAGTATCATGGGAGGTGCGGGTTTTCAACCTAAAGTTGGAATTCACCAAGAACCACTTATTCAAGTTATGTCCAGTATGGCCTCCCACAGTCTCTTCGAAGCAGAAGGCTCCAATGCCAGTCCCTCTCTCATTCAGACGCCAAAAATGGTTCAGGTTTCTGGGTATCCACTACCTCAGACATTGGATGGGAAGCAGCCCCAACCTGGAATTCAGTATGTTCATGGCGGTGCCTGTTATGTACCTCATTATCCT</genome_strand>
        <mrna_strand>GACAAGGTGATAATTTGAGTGCAATCGGAGGGAGTGCTGGAGATGCCAAACAAACATTGCATTGCCCAGGTGGTTCAGTGCCCTAGTCTATGGATTTGGAGACGAGCTCTTCATTTGGGTCGACCAGTTCTTCCATTTCTATGTCTAATATGCCTGCTATTGGAGTTCAAGCCGAGGATGGTGGCGTCAATTTGCAGGACAAAAGAGTGAGAGTGCCCTCATCATCAGCTTCAATAGAGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGATAGTATCATGGGAGGTGCGGGTTTTCAACCTAAAGTTGGAATTCACCAAGAACCACTTATTCAAGTTATGTCCAGTATGGCCTCCCACAGTCTCTTCGAAGCAGAAGGCTCCAATGCCAGTCCCTCTCTCATTCAGACGCCAAAAATGGTTCAGGTTTGTGGGTATCCACTACCTCAGACATTGGATGGGAAGCAGCCCCAACCTGGAATTCAGTATGTTCATGGCGGTGCCTGTTATGTACCTCATTATCCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0011O23-NiWuT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U601338" ref_strand="+" ref_description="SGN-U601338 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|147786953|emb|CAN73294.1| (e_value=2e-28) hypothetical; ">
      <seq>gctgttatccattttatcaggttcccatgcagcagccacaacaaactccttatcctctgaatcaacaatacccaatatacttggttcctgtgcagcaaatgcaatctcacagtatgtcagtactgcccaacattaatcatgcagcagtgatggcgtccaatcggccacccttgcattcacaaagtgtcataaaccctccatcagtagcttataaggaggtcatggcggctcaatcagtgcctgagtcaggtccaaaagtgtacacgactgtcccaacagcatcactacccattagtgcgccttctcagactcagcaacaatatactgtccttcctgaaccacagcttacttcccaacctgtctcaactgcatcagttcctgctgcaaatgatgcaaatgagtttgacgatgatcttgcatacaatcagatatataaatctcagcctcctccaccttctttcatttcccagtgccaaaccattacaaagggggcggcagtattactgtca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0011O23-NiWuT/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0011O23.1" temp_strand="+" temp_description="C02HBa0011O23.1  AC215354.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0011O23 sequenced_by:kribb upload_account_name:korea">
        <position start="83700" stop="84807"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="83999" g_stop="84507" g_length="509"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="509" r_length="509" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0011O23.1" gen_strand="+" ref_id="SGN-U601338" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>509</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0011O23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U601338" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="83999" e_stop="84507"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTGTTATCCATTTTATCAGGTTCCCATGCAGCAGCCACAACAAACTCCTTATCCTCTGAATCAACAATACCCAATATACTTGGTTCCTGTGCAGCAAATGCAATCTCACAGTATGTCAGTACTGCCCAACATTAATCATGCAGCAGTGATGGCGTCCAATCGGCCACCCTTGCATTCACAAAGTGTCATAAACCCTCCATCAGTAGCTTATAAGGAGGTCATGGCGGCTCAATCAGTGCCTGAGTCAGGTCCAAAAGTGTACACGACTGTCCCAACAGCATCACTACCCATTAGTGCGCCTTCTCAGACTCAGCAACAATATACTGTCCTTCCTGAACCACAGCTTACTTCCCAACCTGTCTCAACTGCATCAGTTCCTGCTGCAAATGATGCAAATGAGTTTGACGATGATCTTGCATACAATCAGATATATAAATCTCAGCCTCCTCCACCTTCTTTCATTTCCCAGTGCCAAACCATTACAAAGGGGGCGGCAGTATTACTGTCA</genome_strand>
        <mrna_strand>GCTGTTATCCATTTTATCAGGTTCCCATGCAGCAGCCACAACAAACTCCTTATCCTCTGAATCAACAATACCCAATATACTTGGTTCCTGTGCAGCAAATGCAATCTCACAGTATGTCAGTACTGCCCAACATTAATCATGCAGCAGTGATGGCGTCCAATCGGCCACCCTTGCATTCACAAAGTGTCATAAACCCTCCATCAGTAGCTTATAAGGAGGTCATGGCGGCTCAATCAGTGCCTGAGTCAGGTCCAAAAGTGTACACGACTGTCCCAACAGCATCACTACCCATTAGTGCGCCTTCTCAGACTCAGCAACAATATACTGTCCTTCCTGAACCACAGCTTACTTCCCAACCTGTCTCAACTGCATCAGTTCCTGCTGCAAATGATGCAAATGAGTTTGACGATGATCTTGCATACAATCAGATATATAAATCTCAGCCTCCTCCACCTTCTTTCATTTCCCAGTGCCAAACCATTACAAAGGGGGCGGCAGTATTACTGTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0011O23-NiWuT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U576550" ref_strand="+" ref_description="SGN-U576550 Tomato 200607#2 [5 ESTs aligned] (*GB) gi|147865183|emb|CAN79831.1| (e_value=1e-44) hypothetical; (*ATH) AT1G66840.1 (e_value=1e-24) | Symbol: None | expressed protein, contains Pfam profile PF05701: Plant protein of unknown function (DUF827); expression supported by MPSS | chr1:24937661-24939779 REVERSE | Aliases: F4N21.22, F4N21_22; (*SWP) sp|Q9C9N6|PMI2_ARATH (e_value=1e-23) Protein PLASTID MOVEMENT IMPAIRED 2 OS=Arabidopsis thaliana GN=PMI2; ">
      <seq>gcgaagctttcagttcatgggttcaatggacgttgtgaggaatgagctcaaatgcatctcagaggaatcagctcgattaaagaaaaagggtaacaaggcagactcgacaattcagaacctcaacacgaagcttctgagggcaaaagccaaactggaagctgcatcccacaatgaaggaaaagcaacctctattgcttcaagtttattactcagtcttgaacaattgacaaatgaagctgaagaatctgagaaagaaagagacaatgccattgaggaagctgcaaaagtcgaagaagaaatacagaaaacacaatctgaaacagtgttggccgaggaaagatgggaagctgcaatacaagagcttgaaacaatcaaatcatcagaagctactgtcctaagaaacctaaaaagacttactgatgtaactatgaaaagtagagcatccgcttccacctccacaataactatttccagatttgagtatgagtacttaaaaggacgtgcaggacaggcagttgaaattgctgataagaaagttgaagcagctgaggcttgggtaaaagctttgcaagcaagtgaaaaggagatctcaatgaagacagaggtcatcagaaaggaaatccaagagcttaagatggaagaagagcaaaaaggcctgaaaatggagcattcaccttccgtaagaatgttggtcgatatgcagttgcagaaatgggaggagatacatggaaaagacctggagcaatctccgaacagttcacgtacaaaatccaactcaataagtggaaaaatgacaccagctagacgagctaagttcagaaagtcagcatctcctgcacctcgaacacctagagcttcttccttcgcggttaggagaagaagaaaggtaataccaaacatagctaagttatttattagcaagagcaatgatgaaaacctgtaagctatattattgcagctgcaaatacttgccaaagttttctgatgtaaaagatatgatcccaataaatcctagtgctgtttgtctctgaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0011O23-NiWuT/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0011O23.1" temp_strand="-" temp_description="C02HBa0011O23.1  AC215354.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0011O23 sequenced_by:kribb upload_account_name:korea">
        <position start="86737" stop="85105"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="86437" g_stop="85399" g_length="1039"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="1038" r_length="1038" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0011O23.1" gen_strand="-" ref_id="SGN-U576550" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>1039</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0011O23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U576550" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="86437" e_stop="85399"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGACAGCTTTCAGTTCATGGGTTCAATGGACGTTGTGAGGAATGAGCTCAAATGCATCTCAGAGGAATCAGCTCGATTAAAGAAAAAGGGTAACAAGGCAGACTCGACAATTCAGAACCTCAACACGAAGCTTCTGAGGGCAAAAGCCAAACTGGAAGCTGCATCCCACAATGAAGGAAAAGCAACCTCTATTGCTTCAAGTTTATTACTCAGTCTTGAACAATTGACAAATGAAGCTGAAGAATCTGAGAAAGAAAGAGACAATGCCATTGAGGAAGCTGCAAAAGTCGAAGAAGAAATACAGAAAACACAATCTGAAACAGTGTTGGCCGAGGAAAGATGGGAAGCTGCAATACAAGAGCTTGAAACAATCAAATCATCAGAAGCTACTGTCCTAAGAAACCTAAAAAGACTTACTGATGTAACTATGAAAAGTAGAGCATCCGCTTCCACCTCCACAATAACTATTTCCAGATTTGAGTATGAGTACTTAAAAGGACGTGCAGGACAGGCAGTTGAAATTGCTGATAAGAAAGTTGAAGCAGCTGAGGCTTGGGTAAAAGCTTTGCAAGCAAGTGAAAAGGAGATCTCAATGAAGACAGAGGTCATCAGAAAGGAAATCCAAGAGCTTAAGATGGAAGAAGAGCAAAAAGGCCTGAAAATGGAGCATTCACCTTCCGTAAGAATGTTGGTCGATATGCAGTTGCAGAAATGGGAGGAGATACATGGAAAAGACCTGGAGCAATCTCCGAACAGTTCACGTACAAAATCCAACTCAATAAGTGGAAAAATGACACCAGCTAGACGAGCTAAGTTCAGAAAGTCAGCATCTCCTGCACCTCGAACACCTAGAGCTTCTTCCTTCGCGGTTAGGAGAAGAAGAAAGGTAATACCAAACATAGCTAAGTTATTTATTAGCAAGAGCAATGATGAAAACCTGTAAGCTATATTATTGCAGCTGCAAATACTTGCCAAAGTTTTCTGATGTAAAAGATATGATCCCACTAAATCCTAGTGCTGTTTGTCTCTGCATGTTTT</genome_strand>
        <mrna_strand>GCGA-AGCTTTCAGTTCATGGGTTCAATGGACGTTGTGAGGAATGAGCTCAAATGCATCTCAGAGGAATCAGCTCGATTAAAGAAAAAGGGTAACAAGGCAGACTCGACAATTCAGAACCTCAACACGAAGCTTCTGAGGGCAAAAGCCAAACTGGAAGCTGCATCCCACAATGAAGGAAAAGCAACCTCTATTGCTTCAAGTTTATTACTCAGTCTTGAACAATTGACAAATGAAGCTGAAGAATCTGAGAAAGAAAGAGACAATGCCATTGAGGAAGCTGCAAAAGTCGAAGAAGAAATACAGAAAACACAATCTGAAACAGTGTTGGCCGAGGAAAGATGGGAAGCTGCAATACAAGAGCTTGAAACAATCAAATCATCAGAAGCTACTGTCCTAAGAAACCTAAAAAGACTTACTGATGTAACTATGAAAAGTAGAGCATCCGCTTCCACCTCCACAATAACTATTTCCAGATTTGAGTATGAGTACTTAAAAGGACGTGCAGGACAGGCAGTTGAAATTGCTGATAAGAAAGTTGAAGCAGCTGAGGCTTGGGTAAAAGCTTTGCAAGCAAGTGAAAAGGAGATCTCAATGAAGACAGAGGTCATCAGAAAGGAAATCCAAGAGCTTAAGATGGAAGAAGAGCAAAAAGGCCTGAAAATGGAGCATTCACCTTCCGTAAGAATGTTGGTCGATATGCAGTTGCAGAAATGGGAGGAGATACATGGAAAAGACCTGGAGCAATCTCCGAACAGTTCACGTACAAAATCCAACTCAATAAGTGGAAAAATGACACCAGCTAGACGAGCTAAGTTCAGAAAGTCAGCATCTCCTGCACCTCGAACACCTAGAGCTTCTTCCTTCGCGGTTAGGAGAAGAAGAAAGGTAATACCAAACATAGCTAAGTTATTTATTAGCAAGAGCAATGATGAAAACCTGTAAGCTATATTATTGCAGCTGCAAATACTTGCCAAAGTTTTCTGATGTAAAAGATATGATCCCAATAAATCCTAGTGCTGTTTGTCTCTGAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0011O23-NiWuT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U576055" ref_strand="+" ref_description="SGN-U576055 Tomato 200607#2 [3 ESTs aligned] (*GB) gi|147865183|emb|CAN79831.1| (e_value=5e-21) hypothetical; (*ATH) AT1G66840.1 (e_value=2e-14) | Symbol: None | expressed protein, contains Pfam profile PF05701: Plant protein of unknown function (DUF827); expression supported by MPSS | chr1:24937661-24939779 REVERSE | Aliases: F4N21.22, F4N21_22; (*SWP) sp|Q9C9N6|PMI2_ARATH (e_value=1e-13) Protein PLASTID MOVEMENT IMPAIRED 2 OS=Arabidopsis thaliana GN=PMI2; ">
      <seq>ggaaaaagaagataaaactttcttgttttgctgattagacggagtgaagggtaagtaaatcattttgtgccactagattgatagttttgagttgccctcgaggaaaagacaagatttttgcttgtaatagcagccaatcatcaatagctttatccctcctcaatttttccttttatttcatggtttttttatggagctcatagcacctgctccaactggcaattccgacatcatttttctgatgtactttccaccaaccattagcagagcaatccagaaggaggggagagtttcatgaaagagagcttagggtcatcagttaaggcagccattgatttgtacaaaggaaattctgcaatgaaccaatcctcaattacaaagtctttagagaagccatatgcaagaaccagccaacttcacatagcaaaaaaggacatgggacgactcggtgagagcagaaaagttgcagaggtagaaaaagcccaagcagaaactgagcttttggacgcgagaaagatggtgaaggagctaagttcaaggatagaagagttgaattcaagattaagtgtccagaatcaagatatggagaaactaaagacggcaaaaagagggggaaattgggggatgccacttcgcaatcatcagaataatcagcactccaaagtagtagcagagttgggatatgcaaaagaaaatctgattaagcttaaacaagatatggcttctatcatagaagaaaaaagaagggcagaacaagaaatagaaacctctaatttgaaaatgcaatcttttgcangcaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0011O23-NiWuT/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0011O23.1" temp_strand="-" temp_description="C02HBa0011O23.1  AC215354.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0011O23 sequenced_by:kribb upload_account_name:korea">
        <position start="88127" stop="86538"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="87830" g_stop="87569" g_length="262"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="267" r_length="267" r_score="0.889"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="87568" i_stop="87444" i_length="125">
            <donor d_prob="0.000" d_score="0.98"/>
            <acceptor a_prob="0.446" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="87443" g_stop="87321" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="268" r_stop="390" r_length="123" r_score="0.992"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="87320" i_stop="87249" i_length="72">
            <donor d_prob="0.993" d_score="0.98"/>
            <acceptor a_prob="0.795" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="87248" g_stop="86838" g_length="411"/>
          <reference_exon_boundary r_type="cDNA" r_start="391" r_stop="801" r_length="411" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0011O23.1" gen_strand="-" ref_id="SGN-U576055" ref_strand="+">
        <total_alignment_score>0.952</total_alignment_score>
        <cumulative_length_of_scored_exons>796</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0011O23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U576055" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="87830" e_stop="87569"/>
          <exon e_start="87443" e_stop="87321"/>
          <exon e_start="87248" e_stop="86838"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGAAAAGACGATAAAACTTTCTTGTTTTGCTGATTAGACGGAGTGAAGGGTAAGTAAATCATTTTGTGCCACTAGATTGATAGTTTTGAGTTGCCCCTTGGAGGAAAAGACAAGATTTTTGCTTGTAATAGCAGCCAATCATCAATAGCTTTATCCCTCCTC-----CTCAATTT-TTCCCT-TTATTTTTATGGAGCTCATAGCACCTGCTCCAACTGGCAATTCCAACATCATTTTTCTGATGTACTTTCCACCAACCATTAGCAGCTTAAATTTACTCTGCTTCTAGCTATATTGTGCATATAGTTCTTCCACATATGTATATGAAGTTCCTAAGATTTTGCCTTAGCAGCAGACACAGCTCCATATTCTCTTTTGATGCCAATTTATAGAGCAATCCAGAAGGAGGGGAGAGTTTCATGAAAGAGAGCTTAGGGTCATCAGTTAAGGCAGCCATTGATTTGTACAAAGGAAATTCTGCAATGAACCAATCCTCAATTACCAAGTCTTTAGAGGTATACTACTATATTTTCATCCAACCATATTTGAGCGTGGACTAACCTTTGTGTTGCATACTCTTTTATCAGAAGCCATATGCAAGAACCAGCCAACTTCACATAGCAAAAAGGGACATGGGACGACTGGGTGAGAGCAGAAAAGTTGCAGAGGTAGAAAAAGCCCAAGCAGAAACTGAGCTTTTGGACGCGAGAAAGATGGTGAAGGAGCTAAGTTCAAGGATAGAAGAGTTGAATTCAAGATTAAGTGTCCAGAATCAAGATATGGAGAAACTAAAGACGGCAAAAAGAGGGGGAAATTGGGGGATGCCACTTCGCAATCATCAGAATAATCAGCACTCCAAAGTAGTAGCAGAGTTGGTATATGCAAAAGAAGATCTGATTAAGCTTAAACAAGATATGGCTTCTATCGTAGAAGAAAAAAGAAGGGCAGAGCAAGATATAGAAACCTCTAATTTGAAAATGCAATCTTTTGCAAGCAAA</genome_strand>
        <mrna_strand>GGAAAAAGAAGATAAAACTTTCTTGTTTTGCTGATTAGACGGAGTGAAGGGTAAGTAAATCATTTTGTGCCACTAGATTGATAGTTTTGAGTTG-CCC-TCGAGGAAAAGACAAGATTTTTGCTTGTAATAGCAGCCAATCATCAATAGCTTTATCCCTCCTCAATTTTTCCTTTTATTTCATGGTTTTTTTATGGAGCTCATAGCACCTGCTCCAACTGGCAATTCCGACATCATTTTTCTGATGTACTTTCCACCAACCATTAGCAG.............................................................................................................................AGCAATCCAGAAGGAGGGGAGAGTTTCATGAAAGAGAGCTTAGGGTCATCAGTTAAGGCAGCCATTGATTTGTACAAAGGAAATTCTGCAATGAACCAATCCTCAATTACAAAGTCTTTAGAG........................................................................AAGCCATATGCAAGAACCAGCCAACTTCACATAGCAAAAAAGGACATGGGACGACTCGGTGAGAGCAGAAAAGTTGCAGAGGTAGAAAAAGCCCAAGCAGAAACTGAGCTTTTGGACGCGAGAAAGATGGTGAAGGAGCTAAGTTCAAGGATAGAAGAGTTGAATTCAAGATTAAGTGTCCAGAATCAAGATATGGAGAAACTAAAGACGGCAAAAAGAGGGGGAAATTGGGGGATGCCACTTCGCAATCATCAGAATAATCAGCACTCCAAAGTAGTAGCAGAGTTGGGATATGCAAAAGAAAATCTGATTAAGCTTAAACAAGATATGGCTTCTATCATAGAAGAAAAAAGAAGGGCAGAACAAGAAATAGAAACCTCTAATTTGAAAATGCAATCTTTTGCANGCAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0011O23-NiWuT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U587028" ref_strand="+" ref_description="SGN-U587028 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|157341465|emb|CAO49372.1| (e_value=3e-46) unnamed; (*ATH) AT5G16210.1 (e_value=6e-48) | Symbol: None | HEAT repeat-containing protein, contains Pfam profile PF02985: HEAT repeat | chr5:5290870-5297977 REVERSE | Aliases: T21H19.130, T21H19_130; ">
      <seq>gggttgtgcgtgacactaaagctccngccctcctcttcctctcaaggctcgttgtacagcttctcgcaccgcaacttcaacttggctccatcaaattccctccattccaccgatgccattgtattgatctcaaaatttgaaacgatatgttgatgtacagttgaagacaggagaggagatcaaatggacgtggagaaatcgtccttatgcaattgcgtggtgaattttctcttggaagagaactacttgttatcggcattcgagctccttcacgagcttctcgatgatggccgtgacgatcaggcaattcgtctcaaacagttcttctctgatccttcccaattccctcccgatcagatctctcgcttcaattctatcanagttgcagatccccaaagtctgcttgaagagaaagaagctctggaagaaaagttggcactctgtgaatatgagtttcgtttatctcaagaggacattgtacagctaaagagtgagttgcaaaagaaaagtcagactagtccttgtccaataagtgatttaaagatcgatccctccgaaaaccatggaactgattctcaacagcagaagagggaaggttcttttttctgatttgggtcctttgaaggataatgagcgnaaggatttgaactatgctgtaaaggagtatttactattancaggatatcgcttgactgcantgacnttattggnagaggttactgatcaagacctagatgttcagcanantcctctgcatgcattncanatgcttngcnncattactantancagtacctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0011O23-NiWuT/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0011O23.1" temp_strand="+" temp_description="C02HBa0011O23.1  AC215354.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0011O23 sequenced_by:kribb upload_account_name:korea">
        <position start="90475" stop="94983"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90775" g_stop="91156" g_length="382"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="382" r_length="382" r_score="0.992"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="91157" i_stop="93451" i_length="2295">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.942" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="93452" g_stop="93604" g_length="153"/>
          <reference_exon_boundary r_type="cDNA" r_start="383" r_stop="535" r_length="153" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="93605" i_stop="93912" i_length="308">
            <donor d_prob="0.968" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="93913" g_stop="94091" g_length="179"/>
          <reference_exon_boundary r_type="cDNA" r_start="536" r_stop="715" r_length="180" r_score="0.961"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="94092" i_stop="94652" i_length="561">
            <donor d_prob="0.319" d_score="0.92"/>
            <acceptor a_prob="0.997" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="94653" g_stop="94736" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="716" r_stop="798" r_length="83" r_score="0.881"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0011O23.1" gen_strand="+" ref_id="SGN-U587028" ref_strand="+">
        <total_alignment_score>0.975</total_alignment_score>
        <cumulative_length_of_scored_exons>798</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0011O23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U587028" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90775" e_stop="91156"/>
          <exon e_start="93452" e_stop="93604"/>
          <exon e_start="93913" e_stop="94091"/>
          <exon e_start="94653" e_stop="94736"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGTTGTGCGTGACACTAAAGCTCCAGCCCTCCTCTTCCTCTCAAGGCTCGTTGTACAGCTTCTCGCACCGCAACTTCAACTTGGCTCCATCAAATTCCCTCCATTCCACCGATGCCATTGTATTGATCTCAAAATTTGAAACGATATGTTGATGTACAGTTGAAGACAGGAGAGGAGATCAAATGGACGTGGAGAAATCGTCCTTATGCAATTGCGTGGTGAATTTTCTCTTGGAAGAGAACTACTTGTTATCGGCATTCGAGCTCCTTCACGAGCTTCTCGATGATGGCCGTGACGATCAGGCAATTCGTCTCAAACAGTTCTTCTCTGATCCTTCCCAATTCCCTCCCGATCAGATCTCTCGCTTCAATTCTATCAGAGGTTTGTCCTTTCTATTGATTTCCTACTTACCCTATCCATTAAATAAATCCGGCGTGTTTATGCACATTTTCTGCATTTGCTATTTATTGTTGTGACAAACATTTCCATACTATTTCAGCTGAAATTGACTGAATCAATCCATTTGATTAAGATTAGGTTGTGAGTTTGAGTTGTATTGTTTTTTTTGACTTCTGATGAACATCATGCTGCAACAGCATTTTTTAGGACTAACTGTTGAATTTCAGCCTCTCACTTGGTCACTGACTGAAATCTCATAGAATTATGCAAAATTGAGTATACAGAATAAGTATTACTTGTTTGACTGTATAAGATTCATTCATCCTCGATGAAATATTGAATGGTCCGAAAATTTGAAGCCAGAGTATTTTGTTGTTGTATAAATTGGAGGTAGGAGTGATTCTCTATACAAATTTCATTATTATATATGGTGAAACATGTTTGCTTGTGCTAGAATCTTGGTGTTATTGGCTTGACTTAGGCATTTAGCATACTAATTTTGTAAATGAGGTAATAGAGAGCCCAATGCTTATAATTAATTAATTACTATCAACCTTGAGTTGGCTATGGAAGATATTTAACAGAACAAGGGCTTTAGCAAGAAAAGGAGCTTAAGTGCAGTCATTCATTTTCTTTTGAAATCCGGAGGATGCCATTAACATCATTTACTCTGTTAGGGTGTTCTAAATATCATGGTAAAATAGTTTAGAATCAGTAGTTTTTCCAATGTCAATTATTGTTGTGGTCTTTAGCGGAGCTCTTTTTTCCTTTTCCATTCGCTCTATTTCTTCTTGGGTGCCATGTTGTTATTTCTTTTTCTTTTTTAATGTTTATGATGGTGGTGTTTGGATCAACTGTGCACATCTCGGCCAATCATCAAGCAGATTGCAATAGACCTCACGTATAGGTGGCGGTTGGTGGGTAAACTGCCACCAAGGTTGGAGCAGATGGGTTTATGTCCTTGTTATGTTTCTTGTCAATAGCTTGTTGTAGTGAAATGTCCTGCAAGTGATATTGGTTCTTGTGTGTATATTGTCAGTAGGATATATTCCTTTCAATTGAAACCAAGAGAACCTATTGCTTTCCATGTGAGTAGTCTGTCCTTTTCTGTTGTGACCAAGAATGTTTTGATTTCGTGAACAACATGAGCAATTTATGGAAGTTTCATAAAAAAGTTGCTATTTGCTTCAATGACTCTTGGTAACCCCCCTCCTCCCCACCCCTCCCCCCAAAAAAAAAAAGAAAAAGAAGGAAAGAGAAAAACTTTTTCTGTTTGAAGCTTCATATGTTATTACACTTTTCTTTTATGTTATTATGTACATTATATGTATGAAATTGTTGGGTAGAAAAGTTTCTACATTAACGTCGCCAAAAAGATTGAAGACAGGTCAATTTCTGCATTTGGACAGTCAAGAATTCAAGTTATGGTAGTATATAAATCAACAAAGATACATCATGATGGCTAGTCTCCAAATGTAGCACTTCGAATGAAATCTATTAGAAAATTAGAACATCAATATTTGGTTCCGTAAAGAAAACCTCAAATACATTTACATGTGATTAGCCCTGCACAATCTTGAAGCTTGTTTAATTGAGCTTGTCTTCTGCTGAAGTTCTTGATGTTAAGAACAAATGATTAACCAAAAAAAAGAAAAAGAAATATATGCTGATTTTTAAAAAATAAGATGCTGTCGTTTATGAGAAGAGCGACCTGCAACTGGTTGCATATACTCATTTTGTGATGGTGGTGTCACGGCCAATTTGTGCATATCTCAACTATTCCATCAGGTACTTTCTACCTCCCACCAGCACAAGTATTGTTTGACTTTGCCACCAATGATTAGGAAAATTTTAAAAAATGACCTAGTTTTTCTGGTGGAGTATACCATTTAATTGAGTAAGAGTTCAACATTTTGCAATTAATTTCTGTGATAAGGATTTTGACGATGCAGCCTTTTGGTATGCGATTTTTAGACAAAGCTTTATCCATCAGTTTAGAATGTCAAATTCAATAACAGAGGCTTCAAATAGATTTTGAATTCATTGCTAGAGGCTTAGCCAACATTTTCCACTTCAGAGAAAAGGAGTGGGACTGGGGGTATTTCGATTTGGATTTGACTGAATTCACTGATTTTGTGTAGAATCTCAAGCATTTTGTTCTTCATTATTGACAGTGTTCAGTAGTAATCATTACAACCTCACTTATACTTTTTAGTTCTCATGGTCCTATGTATAATTTGTCTTTCATGACTAATAGCTATTCATTTATGAAAGCAGTTGCAGATCCCCAAAGTCTGCTTGAAGAGAAAGAAGCTCTGGAAGAAAAGTTGGCACTCTGTGAATATGAGTTTCGTTTATCTCAAGAGGACATTGTACAGCTAAAGAGTGAGTTGCAAAAGAAAAGTCAGACTAGTCCTTGTCCAATAAGTGGTATATCCCTAAAACTGTTCTGCATTTTAATTGCCTCATCTAATATTAACTTCATTGCCTTAGCTCATTTATTCAGATAAAGTTCTTGCAAATGTTAGGTAGTCTAGTCTGTAATAATATTTCTAATTGAAGTTGTATCACGAGACAGATCTAGTATTGATGTCAGGATAAATGATAGGCTCATCATGTCTGAGCTGAAGGTAGTTTTTGGAAGGATTGGTGATTCTGTCATTGATGTGGGTTACATATGTCTGCATTGAATATTGTCATTTTGTATATGTGAATAGATCTGTATATTCATTATGCAGATTTAAAGATCGATCCCTCCGAAAACCATGGAACTGATTCTCAACAGCAGAAGAGGGAAGGTTC-TTTTTCTGATTTGGGTCCTTTGAAGGATAATGAGCGGAAGGATTTGAACTATGCTGTAAAGGAGTATTTACTATTAGCAGGATATCGCTTGACTGCAATGACATTATTGGAAGAGGTAGTAATTGATTGAAAGGGGACTTGCTGATTTCTTGATGTTCATCACTAAACTGAAGAAGAATTGCATTTTATTCAACATTGTGTCATGGAGCTATATGTTCAGTTTCCAATATCTTCTTCTTCCGTACTGGAAAGAGTAAAAACTTGGTTTATAAAAGTAGTATTTCAGGATAGAGGCCTCACCTCCAACCATGAGGTTGGGGGTCCAATTCACCCAGGGATCGAAATTGGAAAAACTTGCTAATTATCATCTAGTGTTTTATAAGTTCATAAAATCATCTAGTGTTTTATAAGTTTAGGGGGAAGGGTGCTTTACCATATCCCACCAAACGTAAAAGGGTACGCTGGCACGGTTTGAATTGGGTAATGAGTTTTCTATTATTCTATCATCGTCTTTCAGATGCCTTTGCTGTACAGCCCCTCATCTATTTATGCACTTACTAGGCGGAGGGCCTTGACCATAACAAGACTAATGTGTGAGACACGTGCATCAGATCGTTGGCACTATGCGGAGATGTCATTTTAGAAGTGTTGGTAACTTCTTTATTATGTATGACAGGTTACTGATCAAGACCTAGATGTTCAGCAGAACTCCTCTGCATGCATTCCAGATGCTTTGCGCCATTACTATTACCAGTACCTG</genome_strand>
        <mrna_strand>GGGTTGTGCGTGACACTAAAGCTCCNGCCCTCCTCTTCCTCTCAAGGCTCGTTGTACAGCTTCTCGCACCGCAACTTCAACTTGGCTCCATCAAATTCCCTCCATTCCACCGATGCCATTGTATTGATCTCAAAATTTGAAACGATATGTTGATGTACAGTTGAAGACAGGAGAGGAGATCAAATGGACGTGGAGAAATCGTCCTTATGCAATTGCGTGGTGAATTTTCTCTTGGAAGAGAACTACTTGTTATCGGCATTCGAGCTCCTTCACGAGCTTCTCGATGATGGCCGTGACGATCAGGCAATTCGTCTCAAACAGTTCTTCTCTGATCCTTCCCAATTCCCTCCCGATCAGATCTCTCGCTTCAATTCTATCANAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCAGATCCCCAAAGTCTGCTTGAAGAGAAAGAAGCTCTGGAAGAAAAGTTGGCACTCTGTGAATATGAGTTTCGTTTATCTCAAGAGGACATTGTACAGCTAAAGAGTGAGTTGCAAAAGAAAAGTCAGACTAGTCCTTGTCCAATAAGTG....................................................................................................................................................................................................................................................................................................................ATTTAAAGATCGATCCCTCCGAAAACCATGGAACTGATTCTCAACAGCAGAAGAGGGAAGGTTCTTTTTTCTGATTTGGGTCCTTTGAAGGATAATGAGCGNAAGGATTTGAACTATGCTGTAAAGGAGTATTTACTATTANCAGGATATCGCTTGACTGCANTGACNTTATTGGNAGAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTACTGATCAAGACCTAGATGTTCAGCA-NANTCCTCTGCATGCATTNCANATGCTTNGCNNCATTACTANTANCAGTACCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0011O23-NiWuT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U564999" ref_strand="+" ref_description="SGN-U564999 Tomato 200607#2 [2 ESTs aligned] (*GB) gi|157341465|emb|CAO49372.1| (e_value=2e-11) unnamed; (*ATH) AT5G16210.1 (e_value=1e-12) | Symbol: None | HEAT repeat-containing protein, contains Pfam profile PF02985: HEAT repeat | chr5:5290870-5297977 REVERSE | Aliases: T21H19.130, T21H19_130; ">
      <seq>gaataaaatgcaattcttcttcagtttagtgatgaacatcaagaaatcagcaagtcccctttcaatcaattactacctcttccaataatgtcattgcagtcaagcgatatcctgctaatagtaaatactcctttacagcatagttcaaatccttccgctcattatccttcaaaggacccaaatcagaaaaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0011O23-NiWuT/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0011O23.1" temp_strand="-" temp_description="C02HBa0011O23.1  AC215354.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0011O23 sequenced_by:kribb upload_account_name:korea">
        <position start="94467" stop="93676"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="94167" g_stop="93976" g_length="192"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="192" r_length="192" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0011O23.1" gen_strand="-" ref_id="SGN-U564999" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>192</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0011O23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U564999" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="94167" e_stop="93976"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAATAAAATGCAATTCTTCTTCAGTTTAGTGATGAACATCAAGAAATCAGCAAGTCCCCTTTCAATCAATTACTACCTCTTCCAATAATGTCATTGCAGTCAAGCGATATCCTGCTAATAGTAAATACTCCTTTACAGCATAGTTCAAATCCTTCCGCTCATTATCCTTCAAAGGACCCAAATCAGAAAAAG</genome_strand>
        <mrna_strand>GAATAAAATGCAATTCTTCTTCAGTTTAGTGATGAACATCAAGAAATCAGCAAGTCCCCTTTCAATCAATTACTACCTCTTCCAATAATGTCATTGCAGTCAAGCGATATCCTGCTAATAGTAAATACTCCTTTACAGCATAGTTCAAATCCTTCCGCTCATTATCCTTCAAAGGACCCAAATCAGAAAAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0011O23-NiWuT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U571277" ref_strand="+" ref_description="SGN-U571277 Tomato 200607#2 [5 ESTs aligned] (*GB) gi|157341465|emb|CAO49372.1| (e_value=2e-119) unnamed; (*ATH) AT5G16210.1 (e_value=2e-104) | Symbol: None | HEAT repeat-containing protein, contains Pfam profile PF02985: HEAT repeat | chr5:5290870-5297977 REVERSE | Aliases: T21H19.130, T21H19_130; ">
      <seq>gcgccgcttgctagttgctcaatcttgtggggaacttgctgaattcgtgcgtcctgagattcgagattctcttatcttgtctattgtgcaacagctcattgaggattctgctacagttgttcgggaggcttctgctcataacttggcgttgcttctgcctctcttcccaagtagggacaaatatttcaaggtcagcctcactacataagcttcgaggcaatcatggagaagaaatgtgacttgagagaatttcccacaaagtaagctccgtagtctaggaatggagcattttccctcccctggtcttaatgtggctgcccaaactgattagatgatagcatatacataaatggatattctccaattcctttattttgttattgtgtgtgtaaaggttgaggagatgatgtttcaattggtgtgtgatccatctggagtggtagtggaaacaacaatcaaggaacttgttccagctttagtaaactgggggaaggaattggatcatttactacaagtcttactatctcatgctttgggctctgctcagcgttgtcaaccactttcaggggtggaaggttctatcgagtcacatcttcgtgctttaggagagagagagcgatggaacatagatgttctgatgcgcttactgtcggagttgtttccatttgtacgcaagaaagctattgatacctgtccattcccattggtttcggacgatgaaagactagtcttttctacttcagttcttgaacagtatgctggaggaaagatggactggccttcttttgagtggttgcatattgactgcttttcagcgttgattgaactagcctctctattacctcagaaggaagataacctaaggaatcgaatcacgcggtttttattggcagtttcagacctgctcggggaaccttacctgacacacatcatgctacctgtattcttggtggcagttggtgatgatggtgatttatcatatttccctgcaacgtgccaatcaagaataagaggtttgaaaccgaaaactgcagtagctgaaagacttgctaccatcggtgtcctgcctcttctgctggctggtgttttaggatctcctaggaagcatgaactactgacagagtacttgagaaatctcttgattcaaacttcaggacaagagagtcagacagtgaagcgcgagattttcttttctgttcgctttctttgcactttcgatgaacatcacaatatgatttttaacatcctctgggaaatggttgtgagttctgaaataacatgaatgcaacagctgccaatcttttttaaagtcattgttccatgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0011O23-NiWuT/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0011O23.1" temp_strand="+" temp_description="C02HBa0011O23.1  AC215354.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0011O23 sequenced_by:kribb upload_account_name:korea">
        <position start="97291" stop="99667"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="97591" g_stop="98137" g_length="547"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="547" r_length="547" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="98138" i_stop="98223" i_length="86">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="98224" g_stop="98438" g_length="215"/>
          <reference_exon_boundary r_type="cDNA" r_start="548" r_stop="762" r_length="215" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="98439" i_stop="98553" i_length="115">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.934" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="98554" g_stop="98671" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="763" r_stop="880" r_length="118" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="98672" i_stop="98757" i_length="86">
            <donor d_prob="0.948" d_score="1.00"/>
            <acceptor a_prob="0.978" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="98758" g_stop="98890" g_length="133"/>
          <reference_exon_boundary r_type="cDNA" r_start="881" r_stop="1013" r_length="133" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="98891" i_stop="98985" i_length="95">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="98986" g_stop="99181" g_length="196"/>
          <reference_exon_boundary r_type="cDNA" r_start="1014" r_stop="1209" r_length="196" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="99182" i_stop="99259" i_length="78">
            <donor d_prob="0.431" d_score="1.00"/>
            <acceptor a_prob="0.944" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="99260" g_stop="99365" g_length="106"/>
          <reference_exon_boundary r_type="cDNA" r_start="1210" r_stop="1315" r_length="106" r_score="0.962"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="99366" i_stop="99443" i_length="78">
            <donor d_prob="0.843" d_score="0.92"/>
            <acceptor a_prob="0.928" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="99444" g_stop="99452" g_length="9"/>
          <reference_exon_boundary r_type="cDNA" r_start="1316" r_stop="1324" r_length="9" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0011O23.1" gen_strand="+" ref_id="SGN-U571277" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>1324</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0011O23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U571277" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="97591" e_stop="98137"/>
          <exon e_start="98224" e_stop="98438"/>
          <exon e_start="98554" e_stop="98671"/>
          <exon e_start="98758" e_stop="98890"/>
          <exon e_start="98986" e_stop="99181"/>
          <exon e_start="99260" e_stop="99365"/>
          <exon e_start="99444" e_stop="99452"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCGCCGCTTGCTAGTTGCTCAATCTTGTGGGGAACTTGCTGAATTCGTGCGTCCTGAGATTCGAGATTCTCTTATCTTGTCTATTGTGCAACAGCTCATTGAGGATTCTGCTACAGTTGTTCGGGAGGCTTCTGCTCATAACTTGGCGTTGCTTCTGCCTCTCTTCCCAAGTAGGGACAAATATTTCAAGGTCAGCCTCACTACATAAGCTTCGAGGCAATCATGGAGAAGAAATGTGACTTGAGAGAATTTCCCACAAAGTAAGCTCCGTAGTCTAGGAATGGAGCATTTTCCCTCCCCTGGTCTTAATGTGGCTGCCCAAACTGATTAGATGATAGCATATACATAAATGGATATTCTCCAATTCCTTTATTTTGTTATTGTGTGTGTAAAGGTTGAGGAGATGATGTTTCAATTGGTGTGTGATCCATCTGGAGTGGTAGTGGAAACAACAATCAAGGAACTTGTTCCAGCTTTAGTAAACTGGGGGAAGGAATTGGATCATTTACTACAAGTCTTACTATCTCATGCTTTGGGCTCTGCTCAGGTATGGATTCTGCATTTACTTAGTTCTCCTCACTGAAGCAGTAACTTGTCTTAAACATGGAGCTGATATATTATCCCTCCTTCCAGCGTTGTCAACCACTTTCAGGGGTGGAAGGTTCTATCGAGTCACATCTTCGTGCTTTAGGAGAGAGAGAGCGATGGAACATAGATGTTCTGATGCGCTTACTGTCGGAGTTGTTTCCATTTGTACGCAAGAAAGCTATTGATACCTGTCCATTCCCATTGGTTTCGGACGATGAAAGACTAGTCTTTTCTACTTCAGTTCTTGAACAGTATGCTGGGTAATATCCCCTTTTACCTTAACCTGCGTTTCTAATCTACCTTTCTATTCCTTCTTCAAAGGTGCTCTCACAATGTCTAGTTAATACTTGCAAGATATTTGAATTGTCTATGCAGAGGAAAGATGGACTGGCCTTCTTTTGAGTGGTTGCATATTGACTGCTTTTCAGCGTTGATTGAACTAGCCTCTCTATTACCTCAGAAGGAAGATAACCTAAGGAATCGAATCACGCGGGTAGCTTGAATTGTTTCTCTTAATTTTTGATGCTTTAGTTTTAGAATTGCCTCCTTTCCGGATTCGTCTTTAATTTTGCAATGCAGTTTTTATTGGCAGTTTCAGACCTGCTCGGGGAACCTTACCTGACACACATCATGCTACCTGTATTCTTGGTGGCAGTTGGTGATGATGGTGATTTATCATATTTCCCTGCAACGTGCCAATCAAGAATAAGAGGTAATGAGTTAAAAACTTCTTGTCTCCATCAAACCTTTTAAATGATAGGTCATGTTTAGACCTTATCAAATTGATTTTGATTTGCTCCTCAACAGGTTTGAAACCGAAAACTGCAGTAGCTGAAAGACTTGCTACCATCGGTGTCCTGCCTCTTCTGCTGGCTGGTGTTTTAGGATCTCCTAGGAAGCATGAACTACTGACAGAGTACTTGAGAAATCTCTTGATTCAAACTTCAGGACAAGAGAGTCAGACAGTGAAGCGCGAGATTTTCTTTTCTGTTCGCTTTCTTTGGTTTGTGCCATTTTAATAAAGGCATTACAGTTCTGTGTCTGAACTCCTTAGATGATGGCTGACTATATTTTTCTGCAGCACTTTCGATGAACATCACAATATGATTTTTAACATCCTCTGGGAAATGGTTGTGAGTTCTGAAATAAACATGAAGGCAACAGCTGCCAATC-TTTTTAAAGTCATTGTAAGACCTTTGGTTTTTGTGAAATTGCTTAAATTTAAGCATGGTCTACGACTTTGATCATTCTTGTTAGTTCACCAGGTTCCATGT</genome_strand>
        <mrna_strand>GCGCCGCTTGCTAGTTGCTCAATCTTGTGGGGAACTTGCTGAATTCGTGCGTCCTGAGATTCGAGATTCTCTTATCTTGTCTATTGTGCAACAGCTCATTGAGGATTCTGCTACAGTTGTTCGGGAGGCTTCTGCTCATAACTTGGCGTTGCTTCTGCCTCTCTTCCCAAGTAGGGACAAATATTTCAAGGTCAGCCTCACTACATAAGCTTCGAGGCAATCATGGAGAAGAAATGTGACTTGAGAGAATTTCCCACAAAGTAAGCTCCGTAGTCTAGGAATGGAGCATTTTCCCTCCCCTGGTCTTAATGTGGCTGCCCAAACTGATTAGATGATAGCATATACATAAATGGATATTCTCCAATTCCTTTATTTTGTTATTGTGTGTGTAAAGGTTGAGGAGATGATGTTTCAATTGGTGTGTGATCCATCTGGAGTGGTAGTGGAAACAACAATCAAGGAACTTGTTCCAGCTTTAGTAAACTGGGGGAAGGAATTGGATCATTTACTACAAGTCTTACTATCTCATGCTTTGGGCTCTGCTCAG......................................................................................CGTTGTCAACCACTTTCAGGGGTGGAAGGTTCTATCGAGTCACATCTTCGTGCTTTAGGAGAGAGAGAGCGATGGAACATAGATGTTCTGATGCGCTTACTGTCGGAGTTGTTTCCATTTGTACGCAAGAAAGCTATTGATACCTGTCCATTCCCATTGGTTTCGGACGATGAAAGACTAGTCTTTTCTACTTCAGTTCTTGAACAGTATGCTGG...................................................................................................................AGGAAAGATGGACTGGCCTTCTTTTGAGTGGTTGCATATTGACTGCTTTTCAGCGTTGATTGAACTAGCCTCTCTATTACCTCAGAAGGAAGATAACCTAAGGAATCGAATCACGCGG......................................................................................TTTTTATTGGCAGTTTCAGACCTGCTCGGGGAACCTTACCTGACACACATCATGCTACCTGTATTCTTGGTGGCAGTTGGTGATGATGGTGATTTATCATATTTCCCTGCAACGTGCCAATCAAGAATAAGAG...............................................................................................GTTTGAAACCGAAAACTGCAGTAGCTGAAAGACTTGCTACCATCGGTGTCCTGCCTCTTCTGCTGGCTGGTGTTTTAGGATCTCCTAGGAAGCATGAACTACTGACAGAGTACTTGAGAAATCTCTTGATTCAAACTTCAGGACAAGAGAGTCAGACAGTGAAGCGCGAGATTTTCTTTTCTGTTCGCTTTCTTTG..............................................................................CACTTTCGATGAACATCACAATATGATTTTTAACATCCTCTGGGAAATGGTTGTGAGTTCTGAAAT-AACATGAATGCAACAGCTGCCAATCTTTTTTAAAGTCATT..............................................................................GTTCCATGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0011O23-NiWuT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U594119" ref_strand="+" ref_description="SGN-U594119 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|218188329|gb|EEC70756.1| (e_value=3e-52) hypothetical; (*ATH) AT5G16210.1 (e_value=6e-54) | Symbol: None | HEAT repeat-containing protein, contains Pfam profile PF02985: HEAT repeat | chr5:5290870-5297977 REVERSE | Aliases: T21H19.130, T21H19_130; ">
      <seq>gtgagttctgaaataaacatgaaggcaacagctgccaatctttttaaagtcattgttccatgtattgatgccaaggttgcctcaacacatgttttgcctgctcttgtaacgcttggttctgaccaaaacttgaatgtgaaatatgccagtattgatgcttttggagctgtggcgcagcagtataaaaatgatgcgattgttgataaaatacgtgttcaaatggatgcttttcttgaggatggatcacatgaagctacgttagctgtagttcgtgcattggtgatggcagtgccacataccacggagggacttagagattatttgttgtccaagattttcttacttacagcaacacctcctccttcaagtgacatgatgcgtcgtcgtgagagagccaacacattttgtgaatcaattcgtgctcttgatgctactggtttgctccttttaattattcttcttctctttcattcatctctttactttctgaagatataaatgttcttcaaaatgatcagcctccaggtttagctgcttcttgagataaatcagagtacaatatactatgtattgcagtggactgatacaggtggttgatatcctgatttttggttgtgaaactacctttagcaatcatggttgatcaaagtgattagttgagttttttcccatctaagaagagttaattacctaaaaattgaccgattttttacctaaatacatgccgaagttaacataaatggttgattgtgatttgttgggtttagtgtgcatccttttcttgttcatattaatacaagtgagtga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0011O23-NiWuT/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0011O23.1" temp_strand="+" temp_description="C02HBa0011O23.1  AC215354.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0011O23 sequenced_by:kribb upload_account_name:korea">
        <position start="99012" stop="100707"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="99312" g_stop="99365" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="54" r_length="54" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="99366" i_stop="99443" i_length="78">
            <donor d_prob="0.843" d_score="1.00"/>
            <acceptor a_prob="0.928" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="99444" g_stop="99584" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="55" r_stop="195" r_length="141" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="99585" i_stop="99678" i_length="94">
            <donor d_prob="0.979" d_score="1.00"/>
            <acceptor a_prob="0.900" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="99679" g_stop="99802" g_length="124"/>
          <reference_exon_boundary r_type="cDNA" r_start="196" r_stop="319" r_length="124" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="99803" i_stop="99919" i_length="117">
            <donor d_prob="0.900" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="99920" g_stop="100407" g_length="488"/>
          <reference_exon_boundary r_type="cDNA" r_start="320" r_stop="807" r_length="488" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0011O23.1" gen_strand="+" ref_id="SGN-U594119" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>807</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0011O23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U594119" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="99312" e_stop="99365"/>
          <exon e_start="99444" e_stop="99584"/>
          <exon e_start="99679" e_stop="99802"/>
          <exon e_start="99920" e_stop="100407"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGAGTTCTGAAATAAACATGAAGGCAACAGCTGCCAATCTTTTTAAAGTCATTGTAAGACCTTTGGTTTTTGTGAAATTGCTTAAATTTAAGCATGGTCTACGACTTTGATCATTCTTGTTAGTTCACCAGGTTCCATGTATTGATGCCAAGGTTGCCTCAACACATGTTTTGCCTGCTCTTGTAACGCTTGGTTCTGACCAAAACTTGAATGTGAAATATGCCAGTATTGATGCTTTTGGAGCTGTGGCGCAGCAGTATAAAAATGATGCGGTATAGGGTTTTTGCTTAAATATCTGATGTCATTCTTGTTCTGTGTTCATCTAGAGGCTTTAATGAGACGTTCTGTTCTAACTTTTCTTGCTAGATTGTTGATAAAATACGTGTTCAAATGGATGCTTTTCTTGAGGATGGATCACATGAAGCTACGTTAGCTGTAGTTCGTGCATTGGTGATGGCAGTGCCACATACCACGGAGGGACTTAGAGATTATATCCTCAACCTCTTAGCTTTCATGCACTGCTTGAAGTAGCAATGCATTTTTATAATGTGTGCCAGAACTAGTTTTGATTTCTAATTCTCATCAACTTTCTTTAACTTTAGCATACATTTGTTGTCCAAGATTTTCTTACTTACAGCAACACCTCCTCCTTCAAGTGACATGATGCGTCGTCGTGAGAGAGCCAACACATTTTGTGAATCAATTCGTGCTCTTGATGCTACTGGTTTGCTCCTTTTAATTATTCTTCTTCTCTTTCATTCATCTCTTTACTTTCTGAAGATATAAATGTTCTTCAAAATGATCAGCCTCCAGGTTTAGCTGCTTCTTGAGATAAATCAGAGTACAATATACTATGTATTGCAGTGGACTGATACAGGTGGTTGATATCCTGATTTTTGGTTGTGAAACTACCTTTAGCAATCATGGTTGATCAAAGTGATTAGTTGAGTTTTTTCCCATCTAAGAAGAGTTAATTACCTAAAAATTGACCGATTTTTTACCTAAATACATGCCGAAGTTAACATAAATGGTTGATTGTGATTTGTTGGGTTTAGTGTGCATCCTTTTCTTGTTCATATTAATACAAGTGAGTGA</genome_strand>
        <mrna_strand>GTGAGTTCTGAAATAAACATGAAGGCAACAGCTGCCAATCTTTTTAAAGTCATT..............................................................................GTTCCATGTATTGATGCCAAGGTTGCCTCAACACATGTTTTGCCTGCTCTTGTAACGCTTGGTTCTGACCAAAACTTGAATGTGAAATATGCCAGTATTGATGCTTTTGGAGCTGTGGCGCAGCAGTATAAAAATGATGCG..............................................................................................ATTGTTGATAAAATACGTGTTCAAATGGATGCTTTTCTTGAGGATGGATCACATGAAGCTACGTTAGCTGTAGTTCGTGCATTGGTGATGGCAGTGCCACATACCACGGAGGGACTTAGAGATT.....................................................................................................................ATTTGTTGTCCAAGATTTTCTTACTTACAGCAACACCTCCTCCTTCAAGTGACATGATGCGTCGTCGTGAGAGAGCCAACACATTTTGTGAATCAATTCGTGCTCTTGATGCTACTGGTTTGCTCCTTTTAATTATTCTTCTTCTCTTTCATTCATCTCTTTACTTTCTGAAGATATAAATGTTCTTCAAAATGATCAGCCTCCAGGTTTAGCTGCTTCTTGAGATAAATCAGAGTACAATATACTATGTATTGCAGTGGACTGATACAGGTGGTTGATATCCTGATTTTTGGTTGTGAAACTACCTTTAGCAATCATGGTTGATCAAAGTGATTAGTTGAGTTTTTTCCCATCTAAGAAGAGTTAATTACCTAAAAATTGACCGATTTTTTACCTAAATACATGCCGAAGTTAACATAAATGGTTGATTGTGATTTGTTGGGTTTAGTGTGCATCCTTTTCTTGTTCATATTAATACAAGTGAGTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0011O23-NiWuT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U594120" ref_strand="-" ref_description="SGN-U594120 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|157341465|emb|CAO49372.1| (e_value=2e-56) unnamed; (*ATH) AT5G16210.1 (e_value=1e-57) | Symbol: None | HEAT repeat-containing protein, contains Pfam profile PF02985: HEAT repeat | chr5:5290870-5297977 REVERSE | Aliases: T21H19.130, T21H19_130; ">
      <seq>tacttacagcaacacctcttccttcaagtgacatgatgcgtcgtcgtgagagagccaacacattttgtgaatcaattcgtgctcttgatgctactgatctttctgcttcaagtgtcagagacttccttctacctgcaattcaaaatctgttaaaagatgctgattctcttgatccagcacacaaagaagctctggagatcgtaatgagggaaagatctggtggaacatttgatacgattagtaaggtaatgggtgctcatctgggaattgcgtcatcagtaagcagcttctttggcgaaggtggtttactagggaaaagggaagctggagatccaacatcaccaccagcaccagtggaagttgaacctctgaggcctgtcctcacacatgctgcaccagcagaagacactagatttaggcggatcatgagaggtggttttacagacatgctcagaggaaaagcaaagggcgctggggatactcccccaagtcaatgataatggctctttcatctgcaggagaattaaaaaggaaagtaagttctgtatgttgtgcaatagactacaatgcttccatttgttgattctgcgctgaagttttcccttcacagggatgaaattttgcaatttatttcattctttatgtacaagaaacgtaatgaattcgacaacaaaacgaggagaaagtgtatacatttactagttgtacaaaatgatatgggagattcatagctgtcttgttttcatgtactctaaccagtaaccaacagacctttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0011O23-NiWuT/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0011O23.1" temp_strand="+" temp_description="C02HBa0011O23.1  AC215354.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0011O23 sequenced_by:kribb upload_account_name:korea">
        <position start="99641" stop="101785"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="99941" g_stop="100036" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="96" r_length="96" r_score="0.990"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="100037" i_stop="100805" i_length="769">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.977" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="100806" g_stop="101485" g_length="680"/>
          <reference_exon_boundary r_type="cDNA" r_start="97" r_stop="776" r_length="680" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0011O23.1" gen_strand="+" ref_id="SGN-U594120" ref_strand="-">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>776</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0011O23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U594120" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="99941" e_stop="100036"/>
          <exon e_start="100806" e_stop="101485"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TACTTACAGCAACACCTCCTCCTTCAAGTGACATGATGCGTCGTCGTGAGAGAGCCAACACATTTTGTGAATCAATTCGTGCTCTTGATGCTACTGGTTTGCTCCTTTTAATTATTCTTCTTCTCTTTCATTCATCTCTTTACTTTCTGAAGATATAAATGTTCTTCAAAATGATCAGCCTCCAGGTTTAGCTGCTTCTTGAGATAAATCAGAGTACAATATACTATGTATTGCAGTGGACTGATACAGGTGGTTGATATCCTGATTTTTGGTTGTGAAACTACCTTTAGCAATCATGGTTGATCAAAGTGATTAGTTGAGTTTTTTCCCATCTAAGAAGAGTTAATTACCTAAAAATTGACCGATTTTTTACCTAAATACATGCCGAAGTTAACATAAATGGTTGATTGTGATTTGTTGGGTTTAGTGTGCATCCTTTTCTTGTTCATATTAATACAAGTGAGTGACGAACCCTGTCTTGAGATAGTTAAGTGAGAGTCAGGAAACTCTCAAATTAGTGAAGAGGCCGTCGTTACCTTCGGGATCGATGAAGGTTTGGCAGGAAGATGACTGCTGGGACCGTCTCTACTGAACACTAAAGCATTCATTATGTAGTCTCTAGGCTATGAAGGTGCAACTGATCTATCAAATAAATGTCAGAGGGGATGCAGAAGTCAGAAGAAGGTCCTAGGAGAAGTTCTATTGATCTCTTTTTATCTGGTTGTGTAGTGTAATACAAAAATATAACGACATGTACTATTGAAGCCTAAATGTCGCACACTTGCCTTTTCCTGCTTTTTGGCATTTTGTCTGGACGATTTCATTGAAATCTTCCTTTACTCAGTTTATGATTGTAATATTGCAGATCTTTCTGCTTCAAGTGTCAGAGACTTCCTTCTACCTGCAATTCAAAATCTGTTAAAAGATGCTGATTCTCTTGATCCAGCACACAAAGAAGCTCTGGAGATCGTAATGAGGGAAAGATCTGGTGGAACATTTGATACGATTAGTAAGGTAATGGGTGCTCATCTGGGAATTGCGTCATCAGTAAGCAGCTTCTTTGGCGAAGGTGGTTTACTAGGGAAAAGGGAAGCTGGAGATCCAACATCACCACCAGCACCAGTGGAAGTTGAACCTCTGAGGCCTGTCCTCACACATGCAGCACCAGCAGAAGACACTAGATTTAGGCGGATCATGAGAGGTGGTTTTACAGACATGCTCAGAGGAAAAGCAAAGGGCGCTGGGGATACTCCCCCAAGTCAATGATAATGGCTCTTTCATCTGCAGGAGAATTAAAAAGGAAAGTAAGTTCTGTATGTTGTGCAATAGACTACAATGCTTCCATTTGTTGATTCTGCGCTGAAGTTTTCCCTTCACAGGGATGAAATTTTGCAATTTATTTCATTCTTTATGTACAAGAAACGTAATGAATTCGACAACAAAACGAGGAGAAAGTGTATACATTTACTAGTTGTACAAAATGATATGGGAGATTCATAGCTGTCTTGTTTTCATGTACTCTAACCAGTAACCAACAGACCTTTG</genome_strand>
        <mrna_strand>TACTTACAGCAACACCTCTTCCTTCAAGTGACATGATGCGTCGTCGTGAGAGAGCCAACACATTTTGTGAATCAATTCGTGCTCTTGATGCTACTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTTTCTGCTTCAAGTGTCAGAGACTTCCTTCTACCTGCAATTCAAAATCTGTTAAAAGATGCTGATTCTCTTGATCCAGCACACAAAGAAGCTCTGGAGATCGTAATGAGGGAAAGATCTGGTGGAACATTTGATACGATTAGTAAGGTAATGGGTGCTCATCTGGGAATTGCGTCATCAGTAAGCAGCTTCTTTGGCGAAGGTGGTTTACTAGGGAAAAGGGAAGCTGGAGATCCAACATCACCACCAGCACCAGTGGAAGTTGAACCTCTGAGGCCTGTCCTCACACATGCTGCACCAGCAGAAGACACTAGATTTAGGCGGATCATGAGAGGTGGTTTTACAGACATGCTCAGAGGAAAAGCAAAGGGCGCTGGGGATACTCCCCCAAGTCAATGATAATGGCTCTTTCATCTGCAGGAGAATTAAAAAGGAAAGTAAGTTCTGTATGTTGTGCAATAGACTACAATGCTTCCATTTGTTGATTCTGCGCTGAAGTTTTCCCTTCACAGGGATGAAATTTTGCAATTTATTTCATTCTTTATGTACAAGAAACGTAATGAATTCGACAACAAAACGAGGAGAAAGTGTATACATTTACTAGTTGTACAAAATGATATGGGAGATTCATAGCTGTCTTGTTTTCATGTACTCTAACCAGTAACCAACAGACCTTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0011O23-NiWuT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U579675" ref_strand="+" ref_description="SGN-U579675 Tomato 200607#2 [59 ESTs aligned] (*GB) gi|24745959|dbj|BAC23052.1| (e_value=6e-22) putative lipid transfer protein [Solanum tuberosum]; (*ATH) AT3G18280.1 (e_value=2e-21)  Symbol: None | protease inhibitor/seed storage/lipid transfer protein (LTP) family protein, similar to TED4 (Zinnia elegans) GI:493721; contains Pfam protease inhibitor/seed storage/LTP family domain PF00234 | chr3:6267055-6267649 FORWARD | Aliases:... ; (*SWP) sp|Q43681|NLTP_VIGUN (e_value=8e-23) Probable non-specific lipid-transfer protein AKCS9 OS=Vigna unguiculata; ">
      <seq>atagggcgattggcggccaatcggccgaattgatccatcacttccattacattacttaaaaaatttctcttataatttaaattgtataatgaaaatgactaaggtttgttcttttgtggcagtaatgttggtgatgatccttgtttgtgatcaatttggggctaacgaggcggcgacatgcagcgcctcgcagctgagcccgtgtttgggtgcgatccagggtgggaccgcaccatcacaggattgttgtgctaggcttaagaaccagcagccttgcatttgtggatttatgaaggatcctaatttgaggcaatatgttaattctccaaatgctaggaaagttgctggacaatgtggtgtaagcattcctagttgttaattaggtttacaacattttacttgttgtatacatatgggtcttatgtattatggaaaaaaatatatatatgtaagactttaaataaaaaatggttgtaatctgtgttcaagtgtgttatgatgaatgaatcttgtggcttttgattttatttcn</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0011O23-NiWuT/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0011O23.1" temp_strand="+" temp_description="C02HBa0011O23.1  AC215354.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0011O23 sequenced_by:kribb upload_account_name:korea">
        <position start="104019" stop="105124"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="104323" g_stop="104825" g_length="503"/>
          <reference_exon_boundary r_type="cDNA" r_start="30" r_stop="532" r_length="503" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0011O23.1" gen_strand="+" ref_id="SGN-U579675" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>503</cumulative_length_of_scored_exons>
        <coverage percentage="0.945" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0011O23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U579675" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="104323" e_stop="104825"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCATCCATCACTTCCATTACATTACTTAAAAAATTTCTCTTATAATTTAAATTGTATAATGAAAATGACTAAGGTTTGTTCTTTTGTGGCAGTAATGTTGGTGATGATCCTTGTTTGTGATCAATTTGGGGCTAACGAGGCGGCGACATGCAGCGCCTCGCAGCTGAGCCCGTGTTTGGGTGCGATCCAGGGTGGGACCGCACCATCACAGGATTGTTGTGCTAGGCTTAAGAACCAGCAGCCTTGCATTTGTGGATTTATGAAGGATCCTAATTTGAGGCAATATGTTAATTCTCCAAATGCTAGGAAAGTTGCTGGACAATGTGGTGTAAGCATTCCTAGTTGTTAATTAGGTTTACAACATTTTACTTGTTGTATACATATGGGTCTTATGTATTATGGAAAAAAATATATATATGTAAGACTTTAAATAAAAAATGGTTGTAATCTGTGTTCAAGTGTGTTATGATGAATGAATCTTGTGGCTTTTGATTTTATTTCT</genome_strand>
        <mrna_strand>TTGATCCATCACTTCCATTACATTACTTAAAAAATTTCTCTTATAATTTAAATTGTATAATGAAAATGACTAAGGTTTGTTCTTTTGTGGCAGTAATGTTGGTGATGATCCTTGTTTGTGATCAATTTGGGGCTAACGAGGCGGCGACATGCAGCGCCTCGCAGCTGAGCCCGTGTTTGGGTGCGATCCAGGGTGGGACCGCACCATCACAGGATTGTTGTGCTAGGCTTAAGAACCAGCAGCCTTGCATTTGTGGATTTATGAAGGATCCTAATTTGAGGCAATATGTTAATTCTCCAAATGCTAGGAAAGTTGCTGGACAATGTGGTGTAAGCATTCCTAGTTGTTAATTAGGTTTACAACATTTTACTTGTTGTATACATATGGGTCTTATGTATTATGGAAAAAAATATATATATGTAAGACTTTAAATAAAAAATGGTTGTAATCTGTGTTCAAGTGTGTTATGATGAATGAATCTTGTGGCTTTTGATTTTATTTCN</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0011O23-NiWuT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U578131" ref_strand="+" ref_description="SGN-U578131 Tomato 200607#2 [12 ESTs aligned] (*GB) gi|147792363|emb|CAN76985.1| (e_value=2e-129) hypothetical; (*ATH) AT5G38200.1 (e_value=7e-130) | Symbol: None | similar to expressed protein [Arabidopsis thaliana] (TAIR:At1g66860.1); similar to P0443D08.31 [Oryza sativa (japonica cultivar-group)] (GB:XP_462762.1) | chr5:15273506-15275985 FORWARD | Aliases: MXA21.22; (*SWP) sp|Q9CE00|YVDE_LACLA (e_value=3e-14) Putative glutamine amidotransferase-like protein yvdE OS=Lactococcus lactis subsp. lactis GN=yvdE; ">
      <seq>ctaattcaactttgtgtgtctcattcttcgcctcttaaatagcactctctatctaaattttaattctcatctcttttagtatttgcattttagctactactcataagtagttgccaaaagaaaaaattaaagcaaaatttatcgtgctgccatggctgtcgaggaactctcggttgttctcccccgcgtgctcattgtctctagacgtaccgttcgtaagaacaaatttgttgattttgttggagaatatcatctcgatcttatagtaagctatggagctgttccggtgattgtacccagagtttccggggtacatttgttattagacagttttgaaccaattcatggtgttcttctctgtgaaggagaggatatcgatccttctctgtacaacgatgaactatccgatctctccgtagaagaattggaagaaattaggagattgcacgctagcgacactgcaattgacaaggaaaaagacacaattgaactcagattggctaagctctgtctagaaaggaacattccctatttgggaatatgcaggggttcacaggtactgaatgttgcatgtgggggaactcttatacaagacattggaaaagaaatatcgaaaaaccttcctgagaatcagagggtagttcatatggattacgataactatgatggtcatagacatgttatacaagttgtcgaggaaacgccattgcaccattggttcaaggactcgttggaagacgaaaaaatggagaattcagtcaatagttatcatcatcaaggagttaaaaaattggctcagagatttgttcctatggcatttgcccctgatggtttaattgaaggattctatgatccagatgcttataatcctgttgagggtaagtttattatgggacttcaatttcatccggaacgaatgagacaagaagatagtgatgaatttgattatcctggatgtacatttgcttatcaggagtttgtgaaggctgtagttgcatatcanaaaaaactgttaagca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0011O23-NiWuT/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0011O23.1" temp_strand="+" temp_description="C02HBa0011O23.1  AC215354.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0011O23 sequenced_by:kribb upload_account_name:korea">
        <position start="110612" stop="112500"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="110912" g_stop="111153" g_length="242"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="242" r_length="242" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="111154" i_stop="111233" i_length="80">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="111234" g_stop="111964" g_length="731"/>
          <reference_exon_boundary r_type="cDNA" r_start="243" r_stop="973" r_length="731" r_score="0.999"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="111965" i_stop="112154" i_length="190">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="112155" g_stop="112200" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="974" r_stop="1019" r_length="46" r_score="0.978"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0011O23.1" gen_strand="+" ref_id="SGN-U578131" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>1019</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0011O23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U578131" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="110912" e_stop="111153"/>
          <exon e_start="111234" e_stop="111964"/>
          <exon e_start="112155" e_stop="112200"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTAATTCAACTTTGTGTGTCTCATTCTTCGCCTCTTAAATAGCACTCTCTATCTAAATTTTAATTCTCATCTCTTTTAGTATTTGCATTTTAGCTACTACTCATAAGTAGTTGCCAAAAGAAAAAATTAAAGCAAAATTTATCGTGCTGCCATGGCTGTCGAGGAACTCTCGGTTGTTCTCCCCCGCGTGCTCATTGTCTCTAGACGTACCGTTCGTAAGAACAAATTTGTTGATTTTGTTGGTACGTTATTTTTTTTTTCTTTCACATGATTATCAAAAAGATTGTAAAATTCTGAATTTCAGATTTTGATTAATTTTCAGGAGAATATCATCTCGATCTTATAGTAAGCTATGGAGCTGTTCCGGTGATTGTACCCAGAGTTTCCGGGGTACATTTGTTATTAGACAGTTTTGAACCAATTCATGGTGTTCTTCTCTGTGAAGGAGAGGATATCGATCCTTCTCTGTACAACGATGAACTATCCGATCTCTCCGTAGAAGAATTGGAAGAAATTAGGAGATTGCACGCTAGCGACACTGCAATTGACAAGGAAAAAGACACAATTGAACTCAGATTGGCTAAGCTCTGTCTAGAAAGGAACATTCCCTATTTGGGAATATGCAGGGGTTCACAGGTACTGAATGTTGCATGTGGGGGAACTCTTATACAAGACATTGGAAAAGAAATATCGAAAAACCTTCCTGAGAATCAGAGGGTAGTTCATATGGATTACGATAACTATGATGGTCATAGACATGTTATACAAGTTGTCGAGGAAACGCCATTGCACCATTGGTTCAAGGACTCGTTGGAAGACGAAAAAATGGAGATTTCAGTCAATAGTTATCATCATCAAGGAGTTAAAAAATTGGCTCAGAGATTTGTTCCTATGGCATTTGCCCCTGATGGTTTAATTGAAGGATTCTATGATCCAGATGCTTATAATCCTGTTGAGGGTAAGTTTATTATGGGACTTCAATTTCATCCGGAACGAATGAGACAAGAAGATAGTGATGAATTTGATTATCCTGGATGTACATTTGCTTATCAGGTACCTCTATAAACTTCAATTCCTACTGAATTTTTGATCTTTTACTACGATAAATTTTCATATATTGGACTATCAGTATTACCCAGATATTCCTGGGAAAAATAATGTAACAGAGGATAATTTTGAATAGTTCATTTGACCGTTTTCGTATTAACTTTGTTCTAACAGTTGAATGTACTAATTTTGGCAGGAGTTTGTGAAGGCTGTAGTTGCATATCAGAAAAAACTGTTAAGCA</genome_strand>
        <mrna_strand>CTAATTCAACTTTGTGTGTCTCATTCTTCGCCTCTTAAATAGCACTCTCTATCTAAATTTTAATTCTCATCTCTTTTAGTATTTGCATTTTAGCTACTACTCATAAGTAGTTGCCAAAAGAAAAAATTAAAGCAAAATTTATCGTGCTGCCATGGCTGTCGAGGAACTCTCGGTTGTTCTCCCCCGCGTGCTCATTGTCTCTAGACGTACCGTTCGTAAGAACAAATTTGTTGATTTTGTTG................................................................................GAGAATATCATCTCGATCTTATAGTAAGCTATGGAGCTGTTCCGGTGATTGTACCCAGAGTTTCCGGGGTACATTTGTTATTAGACAGTTTTGAACCAATTCATGGTGTTCTTCTCTGTGAAGGAGAGGATATCGATCCTTCTCTGTACAACGATGAACTATCCGATCTCTCCGTAGAAGAATTGGAAGAAATTAGGAGATTGCACGCTAGCGACACTGCAATTGACAAGGAAAAAGACACAATTGAACTCAGATTGGCTAAGCTCTGTCTAGAAAGGAACATTCCCTATTTGGGAATATGCAGGGGTTCACAGGTACTGAATGTTGCATGTGGGGGAACTCTTATACAAGACATTGGAAAAGAAATATCGAAAAACCTTCCTGAGAATCAGAGGGTAGTTCATATGGATTACGATAACTATGATGGTCATAGACATGTTATACAAGTTGTCGAGGAAACGCCATTGCACCATTGGTTCAAGGACTCGTTGGAAGACGAAAAAATGGAGAATTCAGTCAATAGTTATCATCATCAAGGAGTTAAAAAATTGGCTCAGAGATTTGTTCCTATGGCATTTGCCCCTGATGGTTTAATTGAAGGATTCTATGATCCAGATGCTTATAATCCTGTTGAGGGTAAGTTTATTATGGGACTTCAATTTCATCCGGAACGAATGAGACAAGAAGATAGTGATGAATTTGATTATCCTGGATGTACATTTGCTTATCAG..............................................................................................................................................................................................GAGTTTGTGAAGGCTGTAGTTGCATATCANAAAAAACTGTTAAGCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0011O23-NiWuT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U565293" ref_strand="+" ref_description="SGN-U565293 Tomato 200607#2 [3 ESTs aligned] (*GB) gi|147812634|emb|CAN75059.1| (e_value=1e-21) hypothetical; (*ATH) AT1G66880.1 (e_value=1e-13) | Symbol: None | serine/threonine protein kinase family protein, contains protein kinase domain, Pfam:PF00069; contains serine/threonine protein kinase domain, INTERPRO:IPR002290 | chr1:24950591-24959274 FORWARD | Aliases: F4N21.1, F4N21_1; ">
      <seq>gatcatcttcttcatgctttatttccacctacttttctgctcaccttagacttgtttaataatccattgcctccttcgtttagccactttcatttcccaattttttccaaatgaattctcaaagcttttacttcttctctctgttcactctgttttcatcacttctactaattcatgtacctcgaggttctagtgacccagatgaattttaccagacttgtgggaaaacatatacatgtggcaatattaagggattaagttatccttttatgagtgtcaatgatcctttcttctgtggctatcctggttttgagctcaattgcaatcaggatggtagtactacaatggaaatcgaaaacatcaagtatcgagttttaaacgtacttccaacaacccaaacgataagaattctgagggaggatatcatgaaatcaacttgtcctgttgatttggttaacaccactctggattactccctcttcgattatgcctctggctatacaaacttgacctttatatacgattgccctgttgcatccgactttgcagaaatggatggcactttcacttgtagaaatagcaaatatcacaatgttttcgtgactacctggtgctgtacgcccggggaagtgcgatgctagagccacagatccagtgcctcaaatgagtgctggtaatgtacggtcattgaatacatcaggtctggcacaagtactacaagaggggtttgatataagatggaaacttgaagtaaaacctgcagtaaatgtatccaagacaagggaagatgtggatatgatgaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0011O23-NiWuT/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0011O23.1" temp_strand="+" temp_description="C02HBa0011O23.1  AC215354.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0011O23 sequenced_by:kribb upload_account_name:korea">
        <position start="118298" stop="119699"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="118597" g_stop="119399" g_length="803"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="804" r_length="804" r_score="0.970"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0011O23.1" gen_strand="+" ref_id="SGN-U565293" ref_strand="+">
        <total_alignment_score>0.970</total_alignment_score>
        <cumulative_length_of_scored_exons>803</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0011O23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U565293" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="118597" e_stop="119399"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATCATCTTCTTCATGCTTTATTTCCACCTACTTTTCTGCTCACCTTACACTTGTTTAACAATCCATTGCCT-CTTCGTTTAGCCACATTCATTTCCCAATTTTTTCCAAATGAATTCTCAAAGCTTTTACTTCTTCTCTCTGTTCACTCTGTTTTCATCACTTGTACTAATTCATGTACCTCGAGGTTCGAGTGACCCTGATGAATTTTACCAGACTTGTGGGAAAACATATACATGTGGCAATATTAAGGGATTAAGTTATCCTTTTATGAGTGTCAATGATCCTTTCTTCTGCGGCTATCCTGGTTTTGAGCTCAATTGCAATAAGGATGGTAGTACTACAATGGAAATCGAAAACATCAAGTATCGAGTTTTAAACGTACTTCCAACAACCCAAACGATAAGAATTCTGAGGGAGGATATCATGAAATCCACTTGTCCTGTTGATTTGGTTAACACCACTCTGGATTACTCCCTCTTCGATTATGCCTCTGGCTATACAAACTTGACCTTTCTATACGATTGCCCTGTTGCATCCCACTTTGCAGAAATGGATGGTACTTTCACTTGTAGAAATAGCAAATATCACAATGTTTTCGT-ACTACCTGGTGCTGTAGGCCCGGGGAAGTGCGATGCTAGTGTCACAGTTCCAGTGCCTCAAATGAGTGCTGGTAATGTAGGGTCATTGGATACATCAGGTCTGGCACAAGTACTACAAGAGGGGTTTGATATAAGATGGAAACTTGAAAGTAAAACCTGCAGTAAATGTATCCAAGACAAGGGAAGATGTGGATATGATGAAT</genome_strand>
        <mrna_strand>GATCATCTTCTTCATGCTTTATTTCCACCTACTTTTCTGCTCACCTTAGACTTGTTTAATAATCCATTGCCTCCTTCGTTTAGCCACTTTCATTTCCCAATTTTTTCCAAATGAATTCTCAAAGCTTTTACTTCTTCTCTCTGTTCACTCTGTTTTCATCACTTCTACTAATTCATGTACCTCGAGGTTCTAGTGACCCAGATGAATTTTACCAGACTTGTGGGAAAACATATACATGTGGCAATATTAAGGGATTAAGTTATCCTTTTATGAGTGTCAATGATCCTTTCTTCTGTGGCTATCCTGGTTTTGAGCTCAATTGCAATCAGGATGGTAGTACTACAATGGAAATCGAAAACATCAAGTATCGAGTTTTAAACGTACTTCCAACAACCCAAACGATAAGAATTCTGAGGGAGGATATCATGAAATCAACTTGTCCTGTTGATTTGGTTAACACCACTCTGGATTACTCCCTCTTCGATTATGCCTCTGGCTATACAAACTTGACCTTTATATACGATTGCCCTGTTGCATCCGACTTTGCAGAAATGGATGGCACTTTCACTTGTAGAAATAGCAAATATCACAATGTTTTCGTGACTACCTGGTGCTGTACGCCCGGGGAAGTGCGATGCTAGAGCCACAGATCCAGTGCCTCAAATGAGTGCTGGTAATGTACGGTCATTGAATACATCAGGTCTGGCACAAGTACTACAAGAGGGGTTTGATATAAGATGGAAACTTG-AAGTAAAACCTGCAGTAAATGTATCCAAGACAAGGGAAGATGTGGATATGATGAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0011O23-NiWuT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U582667" ref_strand="+" ref_description="SGN-U582667 Tomato 200607#2 [5 ESTs aligned] (*GB) gi|147812634|emb|CAN75059.1| (e_value=6e-34) hypothetical; (*ATH) AT5G38260.1 (e_value=1e-18)  Symbol: None | serine/threonine protein kinase, putative, similar to receptor serine/threonine kinase PR55K gi:1235680:gb:AAC49208; contains protein kinase domain, Pfam:PF00069; contains serine/threonine protein kinase domain, INTERPRO:IPR002290 | c... ; ">
      <seq>cctttctctgtcccttaaatcctcatctcctttcagcttagctcctgaataaaggtcttttaccacgattaccagttagcgcctctctttcttaggtggtgctaattcccttaatcaaacagaaatgcatccttattttttgctcttcacttccacaatatttatcttgatctatataccggggtctttctgtcaagatgacgaacaatacaggagttgtggtgagccgtttcgctgcggcagcatggatatagtttaccctttttggggagggagaaaaccagagtattgtggtcatccaagttttgagatcaagtgcgaaaataacatccccaaaattactattgaatcaacaggatacgaagtgataggtatcaacacccctaatagaattgtaaccctggctcgcgatgatttactgagtaatatttgtttggataatcctgagaatgcctcctttgatttaaacactttcagctatctttcgagtgacctgaatattaccctgtatttcggctgcaccctccgccctggctcgcaattaccagcttcgtctccaaatagattcaattgcaatagcaatagcagtatatttggtatatatacgctgatcaacgttcccttcgaccttagcctggtaacatgccagaaagaaataatagctagggtcaatcaaacgaatgctgtggcattagccagtcctacagcttccgtggtttttctgagaaacgccattgctggcgggttttcagtaaactggacggcaactactgattcaaagtgccaacaatgcgaggtgnc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0011O23-NiWuT/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0011O23.1" temp_strand="+" temp_description="C02HBa0011O23.1  AC215354.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0011O23 sequenced_by:kribb upload_account_name:korea">
        <position start="121432" stop="122820"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="121732" g_stop="122526" g_length="795"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="801" r_length="801" r_score="0.961"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0011O23.1" gen_strand="+" ref_id="SGN-U582667" ref_strand="+">
        <total_alignment_score>0.961</total_alignment_score>
        <cumulative_length_of_scored_exons>795</cumulative_length_of_scored_exons>
        <coverage percentage="0.993" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0011O23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U582667" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="121732" e_stop="122526"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTTTCTCTGTCCCTTAAATCCTCATCTCCTTTCAGCTTAGCTCCTGAATAAAGGTCTTTTACCACGATTACCAGTTAGCGCCTCTCTTTCTTAGGTGGTGCTAATTCCCTTAATCAAACAGAAATGCATCCTTATTTTTTGCTCTTCACTTCCACAATATTTATCTTGATCTATATACCGGGGTCTTTCTGTCAAGATGACGAACAATACAGGAGTTGTGGTGAGCCGTTTCGCTGCGGCAGCATGGATATAGTTTACCCTTTTTGGGGAGGGAGAAAACCAGAGTATTGTGGTCATCCAAGTTTTGAGATCAAGTGCGAAAATAACATCCCCAAAATTACTATTGAATCAACAGGATACGAAGTGATAGGTATCAACACCCCTAATAGAATTGTAACCCTGGCTCGCGATGATTTACTGAGTAATATTTGTTTGGATAATCCTGAGAATGCCTCCTTTGATTTAAACACTTTCAGCTATCTTTCGAGTGACCTGAATATTACTCTTTATTTCGGCTGCACCCTCCGCCCTGGTTCGCAATTACCAGCTTCGTCTCCAAATAGATTCAATTGCAATAGC---A--A-TATATTTGGTATATATACGCTGATCAACGTTCCCTTCGACCTTAGTCTGGTAACATGCCAGGAAGAAATAATAGTTAGGGTCAATCAAACGAATGCTGTGGCATTAGCCAGTCCTACAGCTTCCGTGGAAGTTCTGAAAAGAGCCATTGCTGGCGGGTTTTCAGTAAACTGGACGGCAACTATTGATTCAAAGTGCAACCAATGCGATAGGTC</genome_strand>
        <mrna_strand>CCTTTCTCTGTCCCTTAAATCCTCATCTCCTTTCAGCTTAGCTCCTGAATAAAGGTCTTTTACCACGATTACCAGTTAGCGCCTCTCTTTCTTAGGTGGTGCTAATTCCCTTAATCAAACAGAAATGCATCCTTATTTTTTGCTCTTCACTTCCACAATATTTATCTTGATCTATATACCGGGGTCTTTCTGTCAAGATGACGAACAATACAGGAGTTGTGGTGAGCCGTTTCGCTGCGGCAGCATGGATATAGTTTACCCTTTTTGGGGAGGGAGAAAACCAGAGTATTGTGGTCATCCAAGTTTTGAGATCAAGTGCGAAAATAACATCCCCAAAATTACTATTGAATCAACAGGATACGAAGTGATAGGTATCAACACCCCTAATAGAATTGTAACCCTGGCTCGCGATGATTTACTGAGTAATATTTGTTTGGATAATCCTGAGAATGCCTCCTTTGATTTAAACACTTTCAGCTATCTTTCGAGTGACCTGAATATTACCCTGTATTTCGGCTGCACCCTCCGCCCTGGCTCGCAATTACCAGCTTCGTCTCCAAATAGATTCAATTGCAATAGCAATAGCAGTATATTTGGTATATATACGCTGATCAACGTTCCCTTCGACCTTAGCCTGGTAACATGCCAGAAAGAAATAATAGCTAGGGTCAATCAAACGAATGCTGTGGCATTAGCCAGTCCTACAGCTTCCGTGGTTTTTCTGAGAAACGCCATTGCTGGCGGGTTTTCAGTAAACTGGACGGCAACTACTGATTCAAAGTGCCAACAATGCGAGGTGNC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0011O23-NiWuT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U582668" ref_strand="+" ref_description="SGN-U582668 Tomato 200607#2 [2 ESTs aligned] (*GB) gi|147812634|emb|CAN75059.1| (e_value=3e-11) hypothetical; ">
      <seq>ggaactggtagatagagggctagaggctgtagtatattgagtttcctatggaatttggacaaaattataacacctacaaaattttatggagagtttaatactagataagcaatgcaaaacaagtacttccgttggtccatactatactgtgttttctagttagtccaaaaataaatattttttcaagatgatggagaaggtattaattggggtttttttcccttcaaagttattctgattttttcatacaagcaagaaaattcatattaaattgatactttactgattgtgaaagagtctttactaagttagcgtttgtaattcaaatctcttgagaaaggactggtatgtatggatgggacatgtaattatctggaaacggaggaacgaagtaaattatgagtaataatagagaaaagattaccgccggcttggtttggtccgtcgttgcagtcgtttggatgaataccattttcacaatgggcaagcaaagtctccaaaatctggattggatccacatcttccacctgacctatcgcattggttgcactttgaatcaatagttgccgtccagtttactgaaaacccgccagcaatggctcttttcagaacttccacggaagctgtaggactggctaatgccacagcattcgtttgattgaccctaactattatttcttcctggcatgttaccagactaaggtcgaagggaacgttgatcagcgtatatataccaaatatattgctattgcaattgaatctatttggagacgaagctggtaattg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0011O23-NiWuT/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0011O23.1" temp_strand="-" temp_description="C02HBa0011O23.1  AC215354.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0011O23 sequenced_by:kribb upload_account_name:korea">
        <position start="123354" stop="121970"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="123054" g_stop="122270" g_length="785"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="786" r_length="786" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0011O23.1" gen_strand="-" ref_id="SGN-U582668" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>785</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0011O23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U582668" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="123054" e_stop="122270"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAACTGGTAGATAGAGGGCTAGAGGCTGTAGTATATTGAGTTTCCTATGGAATTTGGACAAAATTATAACACGTACAAAATTTTATGGAGAGTTTAATACTAGATAAGCAATGCAAAACAAGTACTTCCGTTGGTCCATACTATACTGTGTTTTCTAGTTAGTCCAAAAATAAATATTTTTTCAAGATGATGGAGAAGGTATTAATTGGGGTTTTTTTCCCTTCAAAGTTATTCTGATTTTTTCATACAAGCAAGAAAATTCATATTAAATTGATACTTTACTGATTGTGAAAGAGTCTTTACTAAGTTAGCGTTTGTAATTCAAATCTCTTGAGAAAGGACTGGTATGTATGGATGGGACATGTAATTATCTGGAAACGGAGGAACGAAGTAAATTATGAGTAATAATAGAGAAAAGATTACCGCCGGCTTGGTTTGGTCCGTCGTTGCAGTCGTTTGGATGAGTACCATTTTCACAAT-GGCAAGCAAAGTCTCCAGAATCTGGATTGGATCCACATCTTCCACCTGACCTATCGCATTGGTTGCACTTTGAATCAATAGTTGCCGTCCAGTTTACTGAAAACCCGCCAGCAATGGCTCTTTTCAGAACTTCCACGGAAGCTGTAGGACTGGCTAATGCCACAGCATTCGTTTGATTGACCCTAACTATTATTTCTTCCTGGCATGTTACCAGACTAAGGTCGAAGGGAACGTTGATCAGCGTATATATACCAAATATATTGCTATTGCAATTGAATCTATTTGGAGACGAAGCTGGTAATTG</genome_strand>
        <mrna_strand>GGAACTGGTAGATAGAGGGCTAGAGGCTGTAGTATATTGAGTTTCCTATGGAATTTGGACAAAATTATAACACCTACAAAATTTTATGGAGAGTTTAATACTAGATAAGCAATGCAAAACAAGTACTTCCGTTGGTCCATACTATACTGTGTTTTCTAGTTAGTCCAAAAATAAATATTTTTTCAAGATGATGGAGAAGGTATTAATTGGGGTTTTTTTCCCTTCAAAGTTATTCTGATTTTTTCATACAAGCAAGAAAATTCATATTAAATTGATACTTTACTGATTGTGAAAGAGTCTTTACTAAGTTAGCGTTTGTAATTCAAATCTCTTGAGAAAGGACTGGTATGTATGGATGGGACATGTAATTATCTGGAAACGGAGGAACGAAGTAAATTATGAGTAATAATAGAGAAAAGATTACCGCCGGCTTGGTTTGGTCCGTCGTTGCAGTCGTTTGGATGAATACCATTTTCACAATGGGCAAGCAAAGTCTCCAAAATCTGGATTGGATCCACATCTTCCACCTGACCTATCGCATTGGTTGCACTTTGAATCAATAGTTGCCGTCCAGTTTACTGAAAACCCGCCAGCAATGGCTCTTTTCAGAACTTCCACGGAAGCTGTAGGACTGGCTAATGCCACAGCATTCGTTTGATTGACCCTAACTATTATTTCTTCCTGGCATGTTACCAGACTAAGGTCGAAGGGAACGTTGATCAGCGTATATATACCAAATATATTGCTATTGCAATTGAATCTATTTGGAGACGAAGCTGGTAATTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0011O23-NiWuT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U603747" ref_strand="+" ref_description="SGN-U603747 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|147812634|emb|CAN75059.1| (e_value=8e-22) hypothetical; ">
      <seq>accatcacaattactctcttgttcgccacctttattctcacgacaaccttctccttctctgatgacaacgtcttataccccaattgtcatctcacttactcttgtggttctatccgtaacatcacctacccatttaccggcgtcgatcgccctgactactgtggcctcccggatttcaaactccgatgtgttgacgataaacacaccgagttcactcaccaatcacttacctaccgtgttctttctattaatcagtcatcagcgaccatgactgtatcgagaatcgacctctggaaaaattcctgcccttcgcaattcatcaacaccacttttaattctaccgttttcagtgtcgaccgtaacgaanacgatgaactttcgttgagctacggctgcgatgtatctgcattggttatcacgcctcanaatttgttcaactgtagtgtanatggtttgaattccaccggcgcattttacttactaggtccaattccaagtgacccttttctgaatgtcataacttgtacaactatggtcactgttccgatgtttacaacagtgggtaaaatgctatatagcaatgagantgctcttggggaggcattgatgcnngggttcagtgtgaaatatgataccccttatgatangcgctgttctgantgcaagantctgggtgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0011O23-NiWuT/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0011O23.1" temp_strand="+" temp_description="C02HBa0011O23.1  AC215354.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0011O23 sequenced_by:kribb upload_account_name:korea">
        <position start="124668" stop="125944"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="124968" g_stop="125644" g_length="677"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="677" r_length="677" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0011O23.1" gen_strand="+" ref_id="SGN-U603747" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>677</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0011O23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U603747" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="124968" e_stop="125644"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACCATCACAATTACTCTCTTGTTCGCCACCTTTATTCTCACGACAACCTTCTCCTTCTCTGATGACAACGTCTTATACCCCAATTGTCATCTCACTTACTCTTGTGGTTCTATCCGTAACATCACCTACCCATTTACCGGCGTCGATCGCCCTGACTACTGTGGCCTCCCGGATTTCAAACTCCGATGTGTTGACGATAAACACACCGAGTTCACTCACCAATCACTTACCTACCGTGTTCTTTCTATTAATCAGTCATCAGCGACCATGACTGTATCGAGAATCGACCTCTGGAAAAATTCCTGCCCTTCGCAATTCATCAACACCACTTTTAATTCTACCGTTTTCAGTGTCGACCGTAACGAAGACGATGAACTTTCGTTGAGCTACGGCTGCGATGTATCTGCATTGGTTATCACGCCTCAGAATTTGTTCAACTGTAGTGTAGATGGTTTGAATTCCACCGGCGCATTTTACTTACTAGGTCCAATTCCAAGTGACCCTTTTCTGAATGTCATAACTTGTACAACTATGGTCACTGTTCCGATGTTTACAACAGTGGGTAAAATGCTATATAGCAATGAGATTGCTCTTGGGGAGGCATTGATGCAGGGGTTCAGTGTGAAATATGATACCCCTTATGATAGGCGCTGTTCTGAGTGCAAGAGTCTGGGTGG</genome_strand>
        <mrna_strand>ACCATCACAATTACTCTCTTGTTCGCCACCTTTATTCTCACGACAACCTTCTCCTTCTCTGATGACAACGTCTTATACCCCAATTGTCATCTCACTTACTCTTGTGGTTCTATCCGTAACATCACCTACCCATTTACCGGCGTCGATCGCCCTGACTACTGTGGCCTCCCGGATTTCAAACTCCGATGTGTTGACGATAAACACACCGAGTTCACTCACCAATCACTTACCTACCGTGTTCTTTCTATTAATCAGTCATCAGCGACCATGACTGTATCGAGAATCGACCTCTGGAAAAATTCCTGCCCTTCGCAATTCATCAACACCACTTTTAATTCTACCGTTTTCAGTGTCGACCGTAACGAANACGATGAACTTTCGTTGAGCTACGGCTGCGATGTATCTGCATTGGTTATCACGCCTCANAATTTGTTCAACTGTAGTGTANATGGTTTGAATTCCACCGGCGCATTTTACTTACTAGGTCCAATTCCAAGTGACCCTTTTCTGAATGTCATAACTTGTACAACTATGGTCACTGTTCCGATGTTTACAACAGTGGGTAAAATGCTATATAGCAATGAGANTGCTCTTGGGGAGGCATTGATGCNNGGGTTCAGTGTGAAATATGATACCCCTTATGATANGCGCTGTTCTGANTGCAAGANTCTGGGTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0011O23-NiWuT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U569715" ref_strand="+" ref_description="SGN-U569715 Tomato 200607#2 [5 ESTs aligned] (*GB) gi|157341457|emb|CAO49364.1| (e_value=4e-117) unnamed; (*ATH) AT1G25390.1 (e_value=2e-101) | Symbol: None | protein kinase family protein, contains protein kinase domain, Pfam:PF00069 | chr1:8906439-8908841 REVERSE | Aliases: F2J7.14, F2J7_14; (*SWP) sp|P0C5E2|Y1839_ARATH (e_value=1e-94) Putative serine/threonine-protein kinase At1g18390 OS=Arabidopsis thaliana GN=At1g18390; ">
      <seq>ggtcacaaaagagcagagatgcatatgtatactagaatgtcggtcactatttatatacattgccttatgcgaaaagcagttttaaataatctcccacagaaaatattgacgataacaacataactatatgtaagcaaaaataagaaattaattatctatggaagacgcgagatactgatcacaagtgccatagtagtagttgcttcctcaccttgcatcgaattcaaccaacctgaaaaacatatttcatccactagaatgtggtgtggagctgtcaactcatttgttagcggcaactgaatccggagaagaaagggagtcctttaggagcccaacatcatctaccacaatatccagtacctcagcattgtgtgctttcgactctccattctggatgcctctcaatgtctccagcacttcttgcattgaaggtctcagatctctctcttgttgcagacatcggaaagctaactctgcgactaatgtagtcatcctcctcacggagctgtttgttgagaatccaagagttggatcaactaattcatgaattgaatgaccttggatcttgttgacagccatattagacaaattaatatcatggcggtgcctgttggtatccacagcttctaatgatgagatcagctctaccaacaccaccccaaaactatagacatcactcttttcagtgagctggtaacattggtagtattcaggatcaacgtagcctggtgtaccctgtggagcagtagagacatgtgtgacattatttgggaacagtcttgatagcccaaaatcagcaactttcacatggaaatcgttgtctaacagaatgttgttggttttgacgtcacggtgtattataattgaggagtggagataagccagggcttcagcagtctcaatggctatattcattcggacaggccaagagagtaagccagatttggcccgtttaccatgtagatgatctgccactgtcccatttggtatatactcataaactaggagtaaatctcggcttcgtttagatgtacacccatacaacgtcactaggttcttgtggcgtagctgagttaaaatctctacttcattcatgaactgctccacacgcttgaaattgtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0011O23-NiWuT/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0011O23.1" temp_strand="-" temp_description="C02HBa0011O23.1  AC215354.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0011O23 sequenced_by:kribb upload_account_name:korea">
        <position start="128437" stop="126711"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="128142" g_stop="127011" g_length="1132"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="1122" r_length="1122" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0011O23.1" gen_strand="-" ref_id="SGN-U569715" ref_strand="+">
        <total_alignment_score>0.981</total_alignment_score>
        <cumulative_length_of_scored_exons>1132</cumulative_length_of_scored_exons>
        <coverage percentage="1.009" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0011O23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U569715" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="128142" e_stop="127011"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTATACAAAAGAGCAGAGATGCATATGTATACTAGAATGTTGGCAGCCCTATTCACTATTTTTATACATTGCCTTATGCGAAAAGCAGTTTTAGATAATCTCCCACAGAAAATATTGACGATAGCAACATAACTATATGTAAGCAAAAATAAGAAATAAATTATCTATGGAAGACGCGAGATACTGATCACAAGTGCCATAATAGTAGTTGCTTCCTCACCTTGCATCGAATTCAACCGACCTGAAAAACATATTTCATCCACTAGAATGTGGTGTGGAGCTGTCAACTCATTTGTCAGCGGCAACTGAATCCGGAGAAGAAAGGGAGTCCTTTAGGAGCCCAGCATCATCTACCACAATATCCAGTACCTCAGCATTGTGTGCTTTCGACTCTCCATTCTGGATGCCTCTCAATGTCTCCAGCACTTCTTGCATTGAAGGTCTCAGATCTCTCTCTTGTTGCAGACATCGGAAAGCTAACTCTGCGACTAATGTAGTCATCCTCCTCACGGAGCTGTTTGTTGAGAATCCAAGAGTTGGATCAACTAATTCATGAATTGAATGACCTTGGATCTTGTTGACAGCCATATTAGACAAATTAATATCATGGCGGTGCCTGTTGGTATCCACAGCTTCTAATGATGAGATCAGCTCTACCAACACCACCCCAAAACTATAGACATCACTCTTTTCAGTGAGCTGGTAACATTGGTAGTATTCAGGATCAACGTAGCCTGGTGTACCCTGTGGAGCAGTAGAGACATGTGTGACATTATTTGGGAACAGTCTTGATAGCCCAAAATCAGCAACTTTCACATGGAAATCGTTGTCTAACAGAATGTTGTTGGTTTTGACGTCACGGTGTATTATAATTGAGGAGTGGAGATAAGCCAGGGCTTCAGCAGTCTCAATGGCTATGTTCATTCGGACAGGCCAAGAGAGTAAGCCAGATTTGGCCCGTTTACCATGTAGATGATCTGCCACTGTCCCATTTGGTATATACTCATAAACTAGGAGTAAATCTCGGCTTCGTTTAGATGTACACCCATACAACGTCACTAGGTTCTTGTGGCGTAGCTGAGTTAAAATCTCTACTTCATTCATGAACTGCTCCACACGCTTGAAATTGTT</genome_strand>
        <mrna_strand>GGT-CACAAAAGAGCAGAGATGCATATGTATACTAGAATG-T--C-G-----GTCACTATTTATATACATTGCCTTATGCGAAAAGCAGTTTTAAATAATCTCCCACAGAAAATATTGACGATAACAACATAACTATATGTAAGCAAAAATAAGAAATTAATTATCTATGGAAGACGCGAGATACTGATCACAAGTGCCATAGTAGTAGTTGCTTCCTCACCTTGCATCGAATTCAACCAACCTGAAAAACATATTTCATCCACTAGAATGTGGTGTGGAGCTGTCAACTCATTTGTTAGCGGCAACTGAATCCGGAGAAGAAAGGGAGTCCTTTAGGAGCCCAACATCATCTACCACAATATCCAGTACCTCAGCATTGTGTGCTTTCGACTCTCCATTCTGGATGCCTCTCAATGTCTCCAGCACTTCTTGCATTGAAGGTCTCAGATCTCTCTCTTGTTGCAGACATCGGAAAGCTAACTCTGCGACTAATGTAGTCATCCTCCTCACGGAGCTGTTTGTTGAGAATCCAAGAGTTGGATCAACTAATTCATGAATTGAATGACCTTGGATCTTGTTGACAGCCATATTAGACAAATTAATATCATGGCGGTGCCTGTTGGTATCCACAGCTTCTAATGATGAGATCAGCTCTACCAACACCACCCCAAAACTATAGACATCACTCTTTTCAGTGAGCTGGTAACATTGGTAGTATTCAGGATCAACGTAGCCTGGTGTACCCTGTGGAGCAGTAGAGACATGTGTGACATTATTTGGGAACAGTCTTGATAGCCCAAAATCAGCAACTTTCACATGGAAATCGTTGTCTAACAGAATGTTGTTGGTTTTGACGTCACGGTGTATTATAATTGAGGAGTGGAGATAAGCCAGGGCTTCAGCAGTCTCAATGGCTATATTCATTCGGACAGGCCAAGAGAGTAAGCCAGATTTGGCCCGTTTACCATGTAGATGATCTGCCACTGTCCCATTTGGTATATACTCATAAACTAGGAGTAAATCTCGGCTTCGTTTAGATGTACACCCATACAACGTCACTAGGTTCTTGTGGCGTAGCTGAGTTAAAATCTCTACTTCATTCATGAACTGCTCCACACGCTTGAAATTGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0011O23-NiWuT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U577115" ref_strand="+" ref_description="SGN-U577115 Tomato 200607#2 [3 ESTs aligned] (*GB) gi|147852667|emb|CAN81684.1| (e_value=5e-12) hypothetical; ">
      <seq>gcagtcggtccatattattcggccgtactaaatccttcccaattccccccatcttcactaccatttttgctaaccaaaaaaacaatagttaaaatttgtcgaaatacgtacctcagatcgcaacgaaaatggctactttgcagaaattcaagcttctcgcaactcaatgtgcagtagcaggaagtccaacccggagtccaacaacaagcccagttattcacctccgccgacggaagactctccgtatgctcctcagtcgtagcatcggcggcggaagtggccgtaggctgcctcgacgggaagtctgttcgccggatcggtttgttggagatcgcgattcgacggagaaggggaaggaactggtggtcagtcataagctgaaggacttgtttgtttcgtcgcctccgtcgtttgctgaaaatacgagacaaggactctcgccggcagcctctggtgccggcggcgggtttagttcaggatcagctgttcggcgaataggcttacgctcgcttcggccgttatcagcgacattccggcaacggctactgcggagggcttggcggcctgtacttgtgagcatacccgagtaaattaccaatttactaggtatattgtacctgattaattagagataaaataaatacgagtagtacaatcatatattaggagttaaaacttattaaattctctctgattttgtggcaaagtatatccatttcacagcttaattccgtaatttttccaatgttacggcaaattagcatgaacaatgatcgtaaatttgaaatttcatgaatgacntttaatctaaaagttcactttgtatttctctaatttaatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0011O23-NiWuT/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0011O23.1" temp_strand="+" temp_description="C02HBa0011O23.1  AC215354.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0011O23 sequenced_by:kribb upload_account_name:korea">
        <position start="130826" stop="132265"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="131125" g_stop="131965" g_length="841"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="841" r_length="841" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0011O23.1" gen_strand="+" ref_id="SGN-U577115" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>841</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0011O23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U577115" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="131125" e_stop="131965"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAGACGGTCCATATTATTCGGCCGTACTAAATCCTTCCCAATTCCCCCCATCTTCACTACCATTTTTGCTAACCAAAAAAACAATAGTTAAAATTTGTCGAAATACGTACCTCAGATCGCAACGAAAATGGCTACTTTGCAGAAATTCAAGCTTCTCGCAACTCAATGTGCAGTAGCAGGAAGTCCAACCCGGAGTCCAACAACAAGCCCAGTTATTCACCTCCGCCGACGGAAGACTCTCCGTATGCTCCTCAGTCGTAGCATCGGCGGCGGAAGTGGCCGTAGGCTGCCTCGACGGGAAGTCTGTTCGCCGGATCGGTTTGTTGGAGATCGCGATTCGACGGAGAAGGGGAAGGAACTGGTGGTCAGTCATAAGCTGAAGGACTTGTTTGTTTCGTCGCCTCCGTCGTTTGCTGAAAATACGAGACAAGGACTCTCGCCGGCAGCCTCTGGTGCCGGCGGCGGGTTTAGTTCAGGATCAGCTGTTCGGCGAATAGGCTTACGCTCGCTTCGGCCGTTATCAGCGACATTCCGGCAACGGCTACTGCGGAGGGCTTGGCGGCCTGTACTTGTGAGCATACCCGAGTAAATTACCAATTTACTAGGTATATTGTACCTGATTAATTAGAGATAAAATAAATACGAGTAGTACAATCATATATTAGGAGTTAAAACTTATTAAATTCTCTCTGATTTTGTGGCAAAGTATATCCATTTCACAGCTTAATTCCGTAATTTTTCCAATGTTACGGCAAATTAGCATGAACAATGATCGTAAATTTGAAATTTCATGAATGAC-TTTAATCTAAAAAGTTCACTTTGTATTTCTCTAATTTAATT</genome_strand>
        <mrna_strand>GCAGTCGGTCCATATTATTCGGCCGTACTAAATCCTTCCCAATTCCCCCCATCTTCACTACCATTTTTGCTAACCAAAAAAACAATAGTTAAAATTTGTCGAAATACGTACCTCAGATCGCAACGAAAATGGCTACTTTGCAGAAATTCAAGCTTCTCGCAACTCAATGTGCAGTAGCAGGAAGTCCAACCCGGAGTCCAACAACAAGCCCAGTTATTCACCTCCGCCGACGGAAGACTCTCCGTATGCTCCTCAGTCGTAGCATCGGCGGCGGAAGTGGCCGTAGGCTGCCTCGACGGGAAGTCTGTTCGCCGGATCGGTTTGTTGGAGATCGCGATTCGACGGAGAAGGGGAAGGAACTGGTGGTCAGTCATAAGCTGAAGGACTTGTTTGTTTCGTCGCCTCCGTCGTTTGCTGAAAATACGAGACAAGGACTCTCGCCGGCAGCCTCTGGTGCCGGCGGCGGGTTTAGTTCAGGATCAGCTGTTCGGCGAATAGGCTTACGCTCGCTTCGGCCGTTATCAGCGACATTCCGGCAACGGCTACTGCGGAGGGCTTGGCGGCCTGTACTTGTGAGCATACCCGAGTAAATTACCAATTTACTAGGTATATTGTACCTGATTAATTAGAGATAAAATAAATACGAGTAGTACAATCATATATTAGGAGTTAAAACTTATTAAATTCTCTCTGATTTTGTGGCAAAGTATATCCATTTCACAGCTTAATTCCGTAATTTTTCCAATGTTACGGCAAATTAGCATGAACAATGATCGTAAATTTGAAATTTCATGAATGACNTTTAATCT-AAAAGTTCACTTTGTATTTCTCTAATTTAATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0011O23-NiWuT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U583331" ref_strand="+" ref_description="SGN-U583331 Tomato 200607#2 [2 ESTs aligned] (*GB) gi|157346751|emb|CAO16820.1| (e_value=7e-16) unnamed; (*ATH) AT3G20070.1 (e_value=1e-16) | Symbol: None | expressed protein | chr3:7004678-7006924 REVERSE | Aliases: MAL21.7; ">
      <seq>gcggccgctctcgcacttgtggatcccccgggctgcgggatttcgcgccgaggttatatctcccgccaaagcttgtcattcaaattcttcattttgagaaactgaattgaacaacgccgccggcatttccattccccagttttccgatgtcggcttctttacccaagatggaggcgctttattctaagctctacagcaagtacgctaagctcaagaaagaaaaagacactagcatggagaacctgaatcgggaacaagaggagaaatttgtgaattatgtggctgctgccgatgcagtgattgaccacttgagaagtgaaacggacagactaaaggaacaagtaaatgagttgaggagtgaaatgacatcaatgaggtctgccaatgatgaagaaatgattcgataccaaaagcttttgatggaagagaacctgaagaatacggaactccgtgatgaaattcagaggcttcaacaacatgatcagcaggggacctgtttcaacgctagcaatgataaaggaaaaagcagacaaattattactgatggagattttcttccagatgcattggatgactcaaccataacaaaacaagaaacactttaggcagtctttgctcattgtacaagacacacatacaccgtctcccatggaagaacttccaaatagacctgaacaaccaagtacgagttcatataagtacaccaagcctgcttgctgtagaagaaatgttgacatttcagggtgatagtgctgctgacatattctccagccttgtgcatcttccaagaccttggtcaatggtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0011O23-NiWuT/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0011O23.1" temp_strand="+" temp_description="C02HBa0011O23.1  AC215354.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0011O23 sequenced_by:kribb upload_account_name:korea">
        <position start="135498" stop="138737"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="135798" g_stop="135909" g_length="112"/>
          <reference_exon_boundary r_type="cDNA" r_start="56" r_stop="167" r_length="112" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="135910" i_stop="136043" i_length="134">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="136044" g_stop="136091" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="168" r_stop="215" r_length="48" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="136092" i_stop="136235" i_length="144">
            <donor d_prob="0.981" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="136236" g_stop="136305" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="216" r_stop="285" r_length="70" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="136306" i_stop="136569" i_length="264">
            <donor d_prob="0.957" d_score="1.00"/>
            <acceptor a_prob="0.869" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="136570" g_stop="136660" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="286" r_stop="376" r_length="91" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="136661" i_stop="136739" i_length="79">
            <donor d_prob="0.446" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="136740" g_stop="136801" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="377" r_stop="438" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="136802" i_stop="137897" i_length="1096">
            <donor d_prob="0.883" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="137898" g_stop="138166" g_length="269"/>
          <reference_exon_boundary r_type="cDNA" r_start="439" r_stop="708" r_length="270" r_score="0.993"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="138167" i_stop="138263" i_length="97">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.213" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="138264" g_stop="138297" g_length="34"/>
          <reference_exon_boundary r_type="cDNA" r_start="709" r_stop="742" r_length="34" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="138298" i_stop="138376" i_length="79">
            <donor d_prob="0.930" d_score="0.00"/>
            <acceptor a_prob="0.998" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="138377" g_stop="138437" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="743" r_stop="805" r_length="63" r_score="0.902"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0011O23.1" gen_strand="+" ref_id="SGN-U583331" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>747</cumulative_length_of_scored_exons>
        <coverage percentage="0.928" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0011O23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U583331" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="135798" e_stop="135909"/>
          <exon e_start="136044" e_stop="136091"/>
          <exon e_start="136236" e_stop="136305"/>
          <exon e_start="136570" e_stop="136660"/>
          <exon e_start="136740" e_stop="136801"/>
          <exon e_start="137898" e_stop="138166"/>
          <exon e_start="138264" e_stop="138297"/>
          <exon e_start="138377" e_stop="138437"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATATCTCCCGCCAAAGCTTGTCATTCAAATTCTTCATTTTGAGAAACTGAATTGAACAACGCCGCCGGCATTTCCATTCCCCAGTTTTCCGATGTCGGCTTCTTTACCCAAGGTATAGTTCCTGAATTCAGCTTTACATGTTTTTTTCACTGATAAATCTTCAAATCTGAATGTTAGGGTTAACCGGAGCAATTTCCATAACTAATATGGTTGTTTCGACGGGTTTTAATTTTTTTTTTGTTTCAGATGGAGGCGCTTTATTCTAAGCTCTACAGCAAGTACGCTAAGCTCAAGGTATATAGGGGTTTGTACGAGTTCATTTTTTAAATTTAATTTTTGAGCTGAGCTAGGTGGGAACTTAATGTGTTTTTCTGTTTATAGTTAGTGGTTTGCAAGAGTAAGATTTTTCATTCATTCATTCTTTTTTTTTTTTCGTAGAAAGAAAAAGACACTAGCATGGAGAACCTGAATCGGGAACAAGAGGAGAAATTTGTGAATTATGTGGCTGGTAGGATTATATTTGAAAGCTTACCTTAATTTTTATCTAATTATTATGGAATTTTCCCTTTTTATTTTGTAGCTATTACGTTTTGCCAATTTAAAGTTTGTATTTGTCATCTTCTTACACATCCTATACATTCGAGTCTCTGTTGAAAGTATGAAATTGTATTTCCAGATGATATCTTAACTTGGAGAACTCATAGGTGCTATTTTTAATTACATTAGATACAAACTTGGTTGAAGGTTTGACATGCAGCTTTGTTTCTTCCAGCTGCCGATGCAGTGATTGACCACTTGAGAAGTGAAACGGACAGACTAAAGGAACAAGTAAATGAGTTGAGGAGTGAAATGACATCAATGAGGTCTGCACTCATGAGAAAGGCTTACTCTATTCAGTAGGAATAATGAAAAGAATATAATGTGTACTTAACTCTGCTGCAGGTCTGCCAATGATGAAGAAATGATTCGATACCAAAAGCTTTTGATGGAAGAGAACCTGAAGAGTAAGGATAAATTTCAAGTCATGGTAGAACACTTATAATGTCTATAGTCCTATCTATATTTTCTGCTAGACAGCTAGGCAAGTTAGTATTGCTTTTAAAATATTGGATTTGTGGTTAAGTCTACGTATATGCAAGTTGTAGAAAATACCAGTGACTTCAGAGGTTCAATTTCTTGTTACTCTTATTGAAGCATAAAATTTCTAAGAGAGGTCTCTTTAGTTCAAACACGTTTGAATTTCAATCCATTTAGGACTTGATGTGATTTCTGTATGTCCATTTAGAAAGAGATGTTCAGCTTCAATGCTTGTTTGACAGTCTTAGCAATTGGTTGACGTCAGATGGGGTTTATTTCTTCATAACATTCTTTTTTATTTTATGCCTTTATCTGTCTACCTTCTACAAAACTAGATGCTCCATCTGTGTCTTCTACAGTGTTGTGAAAGGCGATTGCCTTGTCACAATGGCGAGAGGCAAGGTGAGGTGATCCTTCATCGCTTATTAGCTTTGTAGCAAGGCGACGCCATGATGACAAAGGCGAGAAAGGTGTCGGCTTTTATATTTTCTTAATATAGGCGACCAATTTAGAGTTCTAAAAGTTAAAAGGTAACTTTAGGGCTTTCTTTTCAAATTTGCACAGTTGCACTCTTATACTGCGTCTGCGACTCGAACCCCTCTACTCGACTAGACTTCTCCGACGACTCCAAAGTCCAAACAATACATAGTTCTTCTTCAAATTTCTTCTTACTCTGTTTCTTTTTCCTCTTCAGACTTCAGAGTTACTTCTACCTCTGTTTTTTCCTGTCTATTTTGACTTTTGTTCTATTTTATTCTCATTCAAGTTCTAGACTTATAGTAAGTACTTTCCTTTTTCAGTTTTTGAATTGAAATTTTTGCTAATATTTTATTGCTATAGGGATTTGCTAATTGCTCTATGAAGGCAACTATTCATTTTGTTCCTCTGGGGATTTTAGTGCTTCTTATAATGGCTTTGCTGTTTGCTGTTTACTTTTGACTTTTTTGGAGATTTATATTTGCATTTTGTTGAATAAGTATTCCAATTTTGAAATCCAAATAGTTATATAAATATTGCCTGCAGATACGGAACTCCGTGATGAAATTCAGAGGCTTCAACAACATGATCAGCAGGGGACCTGTTTCAACGCTAGCAATGATAAAGGAAAAAGCAGACAAATTATTACTGATGGAGATTTTCTTCCAGATGCATTGGATGACTCAACCATAAC-AAACAAGAAACACTTTAGGCAGTCTTTGCTCATTGTACAAGACACACATACACCGTCTCCCATGGAAGAACTTCCAAATAGACCTGAACAACCAAGTACGAGTTCATATAAGTACACCAAGGTCAGTGCTACTCTCCAATTTCTATCACATATGCTAGTTTATCCAGCAAACTTGAGCTGGGATTTTACTATTCTGACCATCAGGCAATATTTTGCAGCCTGCTTGCTGTAGAAGAAATGTTGACATTTCAGGTTTATCCCAACTTTAGTTGTTAATTTTAGTATGTGTCGTCTCCTCTTATGTAACTATTCCTTTGATGGGATATTTTAG-GTGATAGTGCTGCTGACATA-TCTCCAGCCTTGTGCATCTTCCAAGACCTTGTTCAGTGGTT</genome_strand>
        <mrna_strand>ATATCTCCCGCCAAAGCTTGTCATTCAAATTCTTCATTTTGAGAAACTGAATTGAACAACGCCGCCGGCATTTCCATTCCCCAGTTTTCCGATGTCGGCTTCTTTACCCAAG......................................................................................................................................ATGGAGGCGCTTTATTCTAAGCTCTACAGCAAGTACGCTAAGCTCAAG................................................................................................................................................AAAGAAAAAGACACTAGCATGGAGAACCTGAATCGGGAACAAGAGGAGAAATTTGTGAATTATGTGGCTG........................................................................................................................................................................................................................................................................CTGCCGATGCAGTGATTGACCACTTGAGAAGTGAAACGGACAGACTAAAGGAACAAGTAAATGAGTTGAGGAGTGAAATGACATCAATGAG...............................................................................GTCTGCCAATGATGAAGAAATGATTCGATACCAAAAGCTTTTGATGGAAGAGAACCTGAAGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACGGAACTCCGTGATGAAATTCAGAGGCTTCAACAACATGATCAGCAGGGGACCTGTTTCAACGCTAGCAATGATAAAGGAAAAAGCAGACAAATTATTACTGATGGAGATTTTCTTCCAGATGCATTGGATGACTCAACCATAACAAAACAAGAAACACTTTAGGCAGTCTTTGCTCATTGTACAAGACACACATACACCGTCTCCCATGGAAGAACTTCCAAATAGACCTGAACAACCAAGTACGAGTTCATATAAGTACACCAAG.................................................................................................CCTGCTTGCTGTAGAAGAAATGTTGACATTTCAG...............................................................................GGTGATAGTGCTGCTGACATATTCTCCAGCCTTGTGCATCTTCCAAGACCTTGGTCAATGGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0011O23-NiWuT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U580278" ref_strand="+" ref_description="SGN-U580278 Tomato 200607#2 [49 ESTs aligned] (*GB) gi|78191444|gb|ABB29943.1| (e_value=5e-90) ribosomal protein L11-like protein [Solanum tuberosum]; (*ATH) AT3G58700.1 (e_value=2e-89) | Symbol: None | 60S ribosomal protein L11 (RPL11B), ribosomal protein L11, cytosolic, Arabidopsis thaliana, PIR:S49033 | chr3:21722540-21723930 FORWARD | Aliases: T20N10.50; (*SWP) sp|P42795|RL111_ARATH (e_value=2e-88) 60S ribosomal protein L11-1 OS=Arabidopsis thaliana GN=RPL11A; ">
      <seq>gacgacaatttccgccctctcagagtctcagtaccccttcaactctgctgccgcagctgaaacatcttcccgtggaagcgccatggcttcagagaagaaattgagcaatcccatgagggatatcaaggtccagaagcttgtcctcaatatctccgtcggtgagagtggagatcgactcaccagagcagcgaaagtcttggagcaactcagcggtcaatcccctgttttctctaaggcaaggtatactgtgcggtcctttggaatcaggcgtaatgaaaagatagcttgctatgtgactgtcagaggggagaaagctatgcagcttcttgagagtggattgaaagttaaggaatacgagttgttgagaaggaacttcagtgagaccggctgctttgggtttggtattcaggagcacattgatcttggaattaaatatgatccttcaactggtatttatggaatggatttctatgttgtattggagcgccctggctaccgtgttgcccgtcgtcgcaggtgcaagtctcgagtcgggattcagcacagggtcactaaggaggattcaatgaagtggttccaggtcaaatatgaaggtgttatccttaacaagtcctcaaacattcagtgataagctgagtgccaacttttggaccagcttgtctcctggcaagtttatttttatgtatttttgtagacagccatcgatattactattaaaggaatgttttggagagattctagttggcaaattagtatgttttacttctcattttggcaatcagatgaattcaaatctttgtgatggtaattttcagtttttgcaatttaagtaggaattattcaactaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0011O23-NiWuT/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0011O23.1" temp_strand="-" temp_description="C02HBa0011O23.1  AC215354.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0011O23 sequenced_by:kribb upload_account_name:korea">
        <position start="146617" stop="143160"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="146318" g_stop="146234" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="85" r_length="85" r_score="0.988"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="146233" i_stop="146135" i_length="99">
            <donor d_prob="0.889" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="146134" g_stop="145984" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="86" r_stop="236" r_length="151" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="145983" i_stop="144402" i_length="1582">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.978" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="144401" g_stop="144206" g_length="196"/>
          <reference_exon_boundary r_type="cDNA" r_start="237" r_stop="432" r_length="196" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="144205" i_stop="143880" i_length="326">
            <donor d_prob="0.979" d_score="1.00"/>
            <acceptor a_prob="0.958" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="143879" g_stop="143456" g_length="424"/>
          <reference_exon_boundary r_type="cDNA" r_start="433" r_stop="856" r_length="424" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0011O23.1" gen_strand="-" ref_id="SGN-U580278" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>856</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0011O23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U580278" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="146318" e_stop="146234"/>
          <exon e_start="146134" e_stop="145984"/>
          <exon e_start="144401" e_stop="144206"/>
          <exon e_start="143879" e_stop="143456"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TACGACAATTTCCGCCCTCTCAGAGTCTCAGTACCCCTTCAACTCTGCTGCCGCAGCTGAAACATCTTCCCGTGGAAGCGCCATGGTATCTCTCACCGATTTTCGTTTTCATGAGTGTTGATGCTTTATCATATGTATTCGCCTTTAACTTGAAATATGATTTTTGATTGTGCAATGAGAACAGGCTTCAGAGAAGAAATTGAGCAATCCCATGAGGGATATCAAGGTCCAGAAGCTTGTCCTCAATATCTCCGTCGGTGAGAGTGGAGATCGACTCACCAGAGCAGCGAAAGTCTTGGAGCAACTCAGCGGTCAATCCCCTGTTTTCTCTAAGGGTAACTTTTTGAATCTTCTAATTCTTTTCCATTTAAGTACATTAATTATGTGGTCTGGGAAATATTAGCTTTCTACCATGAACATTTATCTAATGTGTGAATTGACACTTATGTATACCTTCAAGCTGTTCCTTGTAATCCAGTGTCGAATCTTGGATATCTGTAACATGGGTGCACCACTAAAAAAACCAAAGAAAAAGAAATTGATCCCTAATCTACTAATTAAATATCTCAACCTTTAACCAAGTGCACCATTTGGTATCCTTCCTTGTAGCATGGTTACCTGTATATAATATATTAAATATCTTAACCTTTAACCAAGTGCACCATTTGATATCCTTCCTTGTAGCATGGTTACCTGTATATAATATATTAAATATCTCAACCTTTAACCATGTGCTCCATTTGGTATCCTTCCTCGTAGCATGGTTACCTGTGTATAATATTATTCAAGTTTTAGCAATATATACCTAAAATACTTAGTTTTATGGATGGAGAGAGACCAAAGGCTCACGTGCCTCAAATTTTGCCTATGGTGATTGTTTTACTTATTTTGTCTGCTAGTTTTTTTCTAGTTTATCATTGATTTTTAATCAGTTGAAGTTAAAATATCAGCCTGAATAGAATGTAAAGATGCAAAAATCATGTAGCCTAACCTTTTTTTTTTTGGGTTGCATTGGAGCCTAGCCGATTGCTTGATAATGGCGGTGTAAATGTTTAGTCATGGAATTAATCCATGCTTAATTTGATCTATATGCATTCAAGCTGTTTCTCGCAGTGTCAAATCTAGACTTTCTATAATATGGGCCCATGGAGATTTATCCCTAATCCTCTAGTTAAATAACTCAACCTTCAACTAAATGCACCTTAGTCTCCTTGTAGCATGGGTGCCCTGATGCAATATTATACGAATTTAGACAGTTTATACACAAAATGCCTAGTTTTACAGAGACACCACAGGTTCACTTGCTCAATTGTTGACTATAAATTTACCCCTAGTTCTTTTTAGTGTGATTGTTTAACGAATTGTGTCAGTTTTTTAGCTTGTCATTGATTTTTATCCATCACAGTTTAAATATCACCCTCAATAGAAAGGAAGGATGCAAAAATTCATTCAGCCTAACCCTTCTTTTTTGCCTTGGAGCCTAGTTGATTGCTTGATAATGGCAGTGTAAATGTCAAGTCATGGGATTAATCCATGGTTAATTCAATATGTATGCATGTTGATGAAGCTTCCTTTTGTAATTAATGAAGGTACTAGCTTATTTGGTTCATATTCTTGTATTATACTGGGTATATAATTTTTAGCTTTTAGACATGCTAATCTTTGTGGTAGATGTTGGTTGAAGTTGGTGTTTATCTCAATTCATTAGTGTTTATGAAAAACACGCCATTCACGAGTTCTGTGAACTAGTGTCCTGCTTTTGTTCATTCATTGATATGAGAAACCTAGCTGATGAAACTTTAAGTTATTTGTTTTGTAGTGTTTGTCTGTGGACATTTAACAGATGTTATATGTATCTCAGCTTACCCTCTTTAATTTTTTGATCTCTCATGTTATTGTTATGGTTCTCATTATCAGCAAGGTATACTGTGCGGTCCTTTGGAATCAGGCGTAATGAAAAGATAGCTTGCTATGTGACTGTCAGAGGGGAGAAAGCTATGCAGCTTCTTGAGAGTGGATTGAAAGTTAAGGAATACGAGTTGTTGAGAAGGAACTTCAGTGAGACCGGCTGCTTTGGGTTTGGTATTCAGGAGCACATTGATCTTGGAATTAAGTAAGCAGATAATCGTTTAGATGTCTTTCTGGTTTATAGCTTTCACGACTTAAATAATTAGCTATGTTGTATAGGAGGTAACCTGGATCTAGTCTTCCTTTCTTCTTACAAAAAAAAGAAAATCGCATTAGCTATTTCATTAATACCCATATAACTTGGACGTAGTTTAAGGAAACATGATTTACTTTTTTCATATTGTTTCTTGGATCTATCTTATGGTTGCCGTGTCTTACTATATTAACCTCGAAAGATTTGCATCTGCTATTTTGATATAAAATTTCAATCTATTAATGTCTGTCATCCTATGTTTTGTTAAAAAATTTCAGATATGATCCTTCAACTGGTATTTATGGAATGGATTTCTATGTTGTATTGGAGCGCCCTGGCTACCGTGTTGCCCGTCGTCGCAGGTGCAAGTCTCGAGTCGGGATTCAGCACAGGGTCACTAAGGAGGATTCAATGAAGTGGTTCCAGGTCAAATATGAAGGTGTTATCCTTAACAAGTCCTCAAACATTCAGTGATAAGCTGAGTGCCAACTTTTGGACCAGCTTGTCTCCTGGCAAGTTTATTTTTATGTATTTTTGTAGACAGCCATCGATATTACTATTAAAGGAATGTTTTGGAGAGATTCTAGTTGGCAAATTAGTATGTTTTACTTCTCATTTTGGCAATCAGATGAATTCAAATCTTTGTGATGGTAATTTTCAGTTTTTGCAATTTAAGTAGGAATTATTCAACTACACAATTGT</genome_strand>
        <mrna_strand>GACGACAATTTCCGCCCTCTCAGAGTCTCAGTACCCCTTCAACTCTGCTGCCGCAGCTGAAACATCTTCCCGTGGAAGCGCCATG...................................................................................................GCTTCAGAGAAGAAATTGAGCAATCCCATGAGGGATATCAAGGTCCAGAAGCTTGTCCTCAATATCTCCGTCGGTGAGAGTGGAGATCGACTCACCAGAGCAGCGAAAGTCTTGGAGCAACTCAGCGGTCAATCCCCTGTTTTCTCTAAGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGGTATACTGTGCGGTCCTTTGGAATCAGGCGTAATGAAAAGATAGCTTGCTATGTGACTGTCAGAGGGGAGAAAGCTATGCAGCTTCTTGAGAGTGGATTGAAAGTTAAGGAATACGAGTTGTTGAGAAGGAACTTCAGTGAGACCGGCTGCTTTGGGTTTGGTATTCAGGAGCACATTGATCTTGGAATTAA......................................................................................................................................................................................................................................................................................................................................ATATGATCCTTCAACTGGTATTTATGGAATGGATTTCTATGTTGTATTGGAGCGCCCTGGCTACCGTGTTGCCCGTCGTCGCAGGTGCAAGTCTCGAGTCGGGATTCAGCACAGGGTCACTAAGGAGGATTCAATGAAGTGGTTCCAGGTCAAATATGAAGGTGTTATCCTTAACAAGTCCTCAAACATTCAGTGATAAGCTGAGTGCCAACTTTTGGACCAGCTTGTCTCCTGGCAAGTTTATTTTTATGTATTTTTGTAGACAGCCATCGATATTACTATTAAAGGAATGTTTTGGAGAGATTCTAGTTGGCAAATTAGTATGTTTTACTTCTCATTTTGGCAATCAGATGAATTCAAATCTTTGTGATGGTAATTTTCAGTTTTTGCAATTTAAGTAGGAATTATTCAACTAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0011O23-NiWuT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U584418" ref_strand="+" ref_description="SGN-U584418 Tomato 200607#2 [3 ESTs aligned] (*GB) gi|147832566|emb|CAN63846.1| (e_value=2e-55) hypothetical; (*ATH) AT4G17910.1 (e_value=9e-48)  Symbol: None | zinc finger (C3HC4-type RING finger) family protein / pentatricopeptide (PPR) repeat-containing protein, contains Pfam domains PF01535: PPR repeat and PF00097: Zinc finger, C3HC4 type (RING finger) | chr4:9948866-9960416 REVERSE | Ali... ; (*SWP) sp|P0C043|Y4791_ARATH (e_value=5e-48) Uncharacterized pentatricopeptide repeat-containing protein At4g17915 OS=Arabidopsis thaliana GN=At4g17915; ">
      <seq>aactgttggctcagcggaagtccagaaactggcaaagagagctttttgaaattttctttctcattctcttgctagatagcgggtcaaagggctattgatttcgttcgttgtttttaggtatttactctttcagttatgcattgttttttgtgtgcaaatcggtgattctgtattttttttatatgttcatgtgcattgatcatttcctttcaaacagcgatttcataagcatttgatatctgagaagtataaattctgtcatttttgttcgaaaagttgttcagatttcaggtgtgaactgttttgagtagatgcggagaatcaaagataaattatcaacaaggttaatgaatgtttgtgtggcatctctttgtaaagccaaacaattagagaaagctgaaattgttatagttgatggcatacgaattggattgcaaccagatgttgtcacttacaatacattgattgctgcatattgccgctttgttggcatagatgctggttattccatccttaataggatgaaggatgctggaattaaccctgatgttattacctataacgctttgatcgccggagctactagaaattctctgttatctaaatgtctcgacctgtttgatgaaatgcttgagatgagaattcttcctgatatctggagttacaacacattaatgaattgtttctttaaattcggaaagccagangaagcttacagggtttttcaagatattcttttgaaagatatatctgttcattctgcnacatttagtattttaattaatnnntgtgtatganggnnanactgagatgnccttatgctatttagnagtttaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0011O23-NiWuT/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0011O23.1" temp_strand="+" temp_description="C02HBa0011O23.1  AC215354.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0011O23 sequenced_by:kribb upload_account_name:korea">
        <position start="148155" stop="149538"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="148455" g_stop="149294" g_length="840"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="838" r_length="838" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0011O23.1" gen_strand="+" ref_id="SGN-U584418" ref_strand="+">
        <total_alignment_score>0.981</total_alignment_score>
        <cumulative_length_of_scored_exons>840</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0011O23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U584418" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="148455" e_stop="149294"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACTGTTGGCTCAGCGGAAGTCCAGAAACTGGCAAAGAGAGCTTTTTGAAATTTTCTTTCTCATTCTCTTGCTAGATAGCGGGTCAAA-GGCTATTGATTTCGTTCGTTGTTTTTAGGTATTTACTCTTTCAGTTATGCATTGTTTTTTGTGTGCAAATCGGTGATTCTGTATTTTTTTTATATGTTCATGTGCATTGATCATTTCCTTTCAAACAGCGATTTCATAAGCATTTGATATCTGAGAAGTATAAATTCTGTCATTTTTGTTCGAAAAGTTGTTCAGATTTCAGGTGTGAACTGTTTTGAGTAGATGCGGAGAATCAAAGATAAATTATCAACAAGGTTAATGAATGTTTGTGTGGCATCTCTTTGTAAAGCCAAACAATTAGAGAAAGCTGAAATTGTTATAGTTGATGGCATACGAATTGGATTGCAACCAGATGTTGTCACTTACAATACATTGATTGCTGCATATTGCCGCTTTGTTGGCATAGATGCTGGTTATTCCATCCTTAATAGGATGAAGGATGCTGGAATTAACCCTGATGTTATTACCTATAACGCTTTGATCGCCGGAGCTACTAGAAATTCTCTGTTATCTAAATGTCTCGACCTGTTTGATGAAATGCTTGAGATGAGAATTCTTCCTGATATCTGGAGTTACAACACATTAATGAATTGTTTCTTTAAATTCGGAAAGCCAGATGAAGCTTACAGGGTTTTTCAAGATATTCTTTTGAAAGATATATCTGTTCATTCTGCAACATTTAGTATTTTAATTAATGGGCTGTGTATGAATGGATATACTGAGAATGCCCTTATGCTATTTAGGAGTTTAAA</genome_strand>
        <mrna_strand>AACTGTTGGCTCAGCGGAAGTCCAGAAACTGGCAAAGAGAGCTTTTTGAAATTTTCTTTCTCATTCTCTTGCTAGATAGCGGGTCAAAGGGCTATTGATTTCGTTCGTTGTTTTTAGGTATTTACTCTTTCAGTTATGCATTGTTTTTTGTGTGCAAATCGGTGATTCTGTATTTTTTTTATATGTTCATGTGCATTGATCATTTCCTTTCAAACAGCGATTTCATAAGCATTTGATATCTGAGAAGTATAAATTCTGTCATTTTTGTTCGAAAAGTTGTTCAGATTTCAGGTGTGAACTGTTTTGAGTAGATGCGGAGAATCAAAGATAAATTATCAACAAGGTTAATGAATGTTTGTGTGGCATCTCTTTGTAAAGCCAAACAATTAGAGAAAGCTGAAATTGTTATAGTTGATGGCATACGAATTGGATTGCAACCAGATGTTGTCACTTACAATACATTGATTGCTGCATATTGCCGCTTTGTTGGCATAGATGCTGGTTATTCCATCCTTAATAGGATGAAGGATGCTGGAATTAACCCTGATGTTATTACCTATAACGCTTTGATCGCCGGAGCTACTAGAAATTCTCTGTTATCTAAATGTCTCGACCTGTTTGATGAAATGCTTGAGATGAGAATTCTTCCTGATATCTGGAGTTACAACACATTAATGAATTGTTTCTTTAAATTCGGAAAGCCAGANGAAGCTTACAGGGTTTTTCAAGATATTCTTTTGAAAGATATATCTGTTCATTCTGCNACATTTAGTATTTTAATTAAT-NNNTGTGTATG-ANGGNNANACTGAG-ATGNCCTTATGCTATTTAGNAGTTTAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0011O23-NiWuT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U575207" ref_strand="+" ref_description="SGN-U575207 Tomato 200607#2 [3 ESTs aligned] (*GB) gi|147856513|emb|CAN82502.1| (e_value=5e-37) hypothetical; (*ATH) AT5G38220.2 (e_value=9e-37) | Symbol: None | expressed protein | chr5:15286108-15288565 FORWARD | Aliases: None; (*SWP) sp|Q5ZJX1|F108C_CHICK (e_value=6e-17) Abhydrolase domain-containing protein FAM108C1 OS=Gallus gallus GN=FAM108C1; ">
      <seq>gagaaaatttcaaatatatatgattagttcaagctaataattataagcatgaatgaaggatatatatgaacaaaaaagttaaagacaattcacgtaaagtaaagtattgattgtttagtgtcgcctcttcacaagaggcttattgactaggaagagtatgtcttagaaccttgatgaagattaagcgaggcaaagcgcctcaacacgttttgagcctcgcttcagggctaagtgcacttttgacaacactggtcaaactttaattagaatgttgctttgtgcgtcaaaacatcttaatctgtctttatatagttttctgcttaatgttattaacaaatatgtgtgagacctgacacaggtatataagaaagtttcagttcttaatcttggatttttcattcattgcttgctctaggaactcatttggtattcatatgggtctattccgttgttgctgtttgttgtttaaattataatgaaatcatcctttctctgaaacagccatctgaatgtaatacatacgcggacattgatgcagtatataaatgcttaaaggagcaatatgaggtcaaagatgaacagttaataatctatggtcaatctgttggcagtggcccaactgttgatcttgcatcacgagtacccaatttacgaggtgttgttttacatagtccaatattgtctggtgtaagagttttgtaccctgtcaagcggacatattggtttgacatatacaaggtaaaacactctcagtggttatctgtacgtcatgcttttccatctccactttgtaaatctgattccattactccaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0011O23-NiWuT/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0011O23.1" temp_strand="+" temp_description="C02HBa0011O23.1  AC215354.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0011O23 sequenced_by:kribb upload_account_name:korea">
        <position start="157763" stop="159176"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="158063" g_stop="158876" g_length="814"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="814" r_length="814" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0011O23.1" gen_strand="+" ref_id="SGN-U575207" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>814</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0011O23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U575207" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="158063" e_stop="158876"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGAAAATTTCAAATATATATGATTAGTTCAAGCTAATAATTATAAGCATGAATGAAGGATATATATGAACAAAAAAGTTAAAGACAATTCACGTAAAGTAAAGTATTGATTGTTTAGTGTCGCCTCTTCACAAGAGGCTTATTGACTAGGAAGAGTATGTCTTAGAACCTTGATGAAGATTAAGCGAGGCAAAGCGCCTCAACACGTTTTGAGCCTCGCTTCAGGGCTAAGTGCACTTTTGACAACACTGGTCAAACTTTAATTAGAATGTTGCTTTGTGCGTCAAAACATCTTAATCTGTCTTTATATAGTTTTCTGCTTAATGTTATTAACAAATATGTGTGAGACCTGACACAGGTATATAAGAAAGTTTCAGTTCTTAATCTTGGATTTTTCATTCATTGCTTGCTCTAGGAACTCATTTGGTATTCATATGGGTCTATTCCGTTGTTGCTGTTTGTTGTTTAAATTATAATGAAATCATCCTTTCTCTGAAACAGCCATCTGAATGTAATACATACGCGGACATTGATGCAGTATATAAATGCTTAAAGGAGCAATATGAGGTCAAAGATGAACAGTTAATAATCTATGGTCAATCTGTTGGCAGTGGCCCAACTGTTGATCTTGCATCACGAGTACCCAATTTACGAGGTGTTGTTTTACATAGTCCAATATTGTCTGGTGTAAGAGTTTTGTACCCTGTCAAGCGGACATATTGGTTTGACATATACAAGGTAAAACACTCTCAGTGGTTATCTGTACGTAATGCTTTTCCATCTCCACTTGTAAAATCTGATTCCATTACTCCAA</genome_strand>
        <mrna_strand>GAGAAAATTTCAAATATATATGATTAGTTCAAGCTAATAATTATAAGCATGAATGAAGGATATATATGAACAAAAAAGTTAAAGACAATTCACGTAAAGTAAAGTATTGATTGTTTAGTGTCGCCTCTTCACAAGAGGCTTATTGACTAGGAAGAGTATGTCTTAGAACCTTGATGAAGATTAAGCGAGGCAAAGCGCCTCAACACGTTTTGAGCCTCGCTTCAGGGCTAAGTGCACTTTTGACAACACTGGTCAAACTTTAATTAGAATGTTGCTTTGTGCGTCAAAACATCTTAATCTGTCTTTATATAGTTTTCTGCTTAATGTTATTAACAAATATGTGTGAGACCTGACACAGGTATATAAGAAAGTTTCAGTTCTTAATCTTGGATTTTTCATTCATTGCTTGCTCTAGGAACTCATTTGGTATTCATATGGGTCTATTCCGTTGTTGCTGTTTGTTGTTTAAATTATAATGAAATCATCCTTTCTCTGAAACAGCCATCTGAATGTAATACATACGCGGACATTGATGCAGTATATAAATGCTTAAAGGAGCAATATGAGGTCAAAGATGAACAGTTAATAATCTATGGTCAATCTGTTGGCAGTGGCCCAACTGTTGATCTTGCATCACGAGTACCCAATTTACGAGGTGTTGTTTTACATAGTCCAATATTGTCTGGTGTAAGAGTTTTGTACCCTGTCAAGCGGACATATTGGTTTGACATATACAAGGTAAAACACTCTCAGTGGTTATCTGTACGTCATGCTTTTCCATCTCCACTTTGTAAATCTGATTCCATTACTCCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0011O23-NiWuT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U588066" ref_strand="+" ref_description="SGN-U588066 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>gagaaaatttcatttatatatgattagttcaagctaataattataagcgtgaatgaaggatatatatgaacaaaaaagttaaagacaattcacgtaaagtaaagtattgattgtttagtgtcgcctcttcacaagaggcttattgactaggaagattatgtcttagaaccttgatgaagattaacccaggctaaacgcctcaacacgttttgagccccgcttcagggctac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0011O23-NiWuT/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0011O23.1" temp_strand="+" temp_description="C02HBa0011O23.1  AC215354.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0011O23 sequenced_by:kribb upload_account_name:korea">
        <position start="157763" stop="158592"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="158063" g_stop="158293" g_length="231"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="231" r_length="231" r_score="0.957"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0011O23.1" gen_strand="+" ref_id="SGN-U588066" ref_strand="+">
        <total_alignment_score>0.957</total_alignment_score>
        <cumulative_length_of_scored_exons>231</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0011O23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U588066" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="158063" e_stop="158293"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGAAAATTTCAAATATATATGATTAGTTCAAGCTAATAATTATAAGCATGAATGAAGGATATATATGAACAAAAAAGTTAAAGACAATTCACGTAAAGTAAAGTATTGATTGTTTAGTGTCGCCTCTTCACAAGAGGCTTATTGACTAGGAAGAGTATGTCTTAGAACCTTGATGAAGATTAAGCGAGGCAAAGCGCCTCAACACGTTTTGAGCCTCGCTTCAGGGCTAA</genome_strand>
        <mrna_strand>GAGAAAATTTCATTTATATATGATTAGTTCAAGCTAATAATTATAAGCGTGAATGAAGGATATATATGAACAAAAAAGTTAAAGACAATTCACGTAAAGTAAAGTATTGATTGTTTAGTGTCGCCTCTTCACAAGAGGCTTATTGACTAGGAAGATTATGTCTTAGAACCTTGATGAAGATTAACCCAGGCTAAACGCCTCAACACGTTTTGAGCCCCGCTTCAGGGCTAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>26</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="-" PGL_start="1931" PGL_stop="1213"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="1931" e_stop="1213"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="1931" e_stop="1213" e_length="719"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="1931" stop="1213"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U570974" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GTGTTGAGTATGGATTCTATACTCTGTGATGAACTTCTCCAAGAAATATTCCGCCGCCTTCCTCCACCGTCTGCCGCCTCTGTTTCTTTAGTCTGTAAGCGGTGGCTTCATCTTCTTCGTTCTTCAACTACTTCTCTTTCTATCTGTTTTATTGAAACCCCTTTGATCCCTCTTTTCTCATCTTTTCTCAGTTTTCATCCTTTTTTATCTACTCTTTCTGTTACCATTACACATACACTAGATTCCTCTGATCAATTGCTTAATTCCGTTGCTTCTTCTTGCCCTAACCTACGACATCTCCGATTCTTGAATGGCTCTGTTTCTACTTTATCTCTGTTTTCTCTTTCTGTTTCTTGCCCTAATCTTGTTTCTCTTGCTGTAACTCTTTTTAGACCCCTTTCTTTTCTCTGGGTAACCCCTTTTGGCTGTCTTAAAGAACTCTCTATTTACTCAGCTGGAAATTCAGGGGAATTTGATTATGGGGAGTTTTATGGTTCTTGTGAGTTGAATTTGGAGAGTCTTTTGTTGACTGGAATTAAATCAGGGGATAAGGGGGTTGGTTTTTTATGGAGGAATTGCAAAAAGGTAACAACTTTGAAGCTGATAAGCTGTGAAGGGGTTGGTGATCAAGGTTCTTTTTTAACATTTCTTCAGTGTTTAGAGGGTCTTCAAGAATTGGAATTGAGAACTTGTAGGACAATTGCTGATGGGGTTTTGTT</gDNA_template>
            <first_frame> V  L  S  M  D  S  I  L  C  D  E  L  L  Q  E  I  F  R  R  L  P  P  P  S  A  A  S  V  S  L  V  C  K  R  W  L  H  L  L  R  S  S  T  T  S  L  S  I  C  F  I  E  T  P  L  I  P  L  F  S  S  F  L  S  F  H  P  F  L  S  T  L  S  V  T  I  T  H  T  L  D  S  S  D  Q  L  L  N  S  V  A  S  S  C  P  N  L  R  H  L  R  F  L  N  G  S  V  S  T  L  S  L  F  S  L  S  V  S  C  P  N  L  V  S  L  A  V  T  L  F  R  P  L  S  F  L  W  V  T  P  F  G  C  L  K  E  L  S  I  Y  S  A  G  N  S  G  E  F  D  Y  G  E  F  Y  G  S  C  E  L  N  L  E  S  L  L  L  T  G  I  K  S  G  D  K  G  V  G  F  L  W  R  N  C  K  K  V  T  T  L  K  L  I  S  C  E  G  V  G  D  Q  G  S  F  L  T  F  L  Q  C  L  E  G  L  Q  E  L  E  L  R  T  C  R  T  I  A  D  G  V  L   </first_frame>
            <second_frame>  C  *  V  W  I  L  Y  S  V  M  N  F  S  K  K  Y  S  A  A  F  L  H  R  L  P  P  L  F  L  *  S  V  S  G  G  F  I  F  F  V  L  Q  L  L  L  F  L  S  V  L  L  K  P  L  *  S  L  F  S  H  L  F  S  V  F  I  L  F  Y  L  L  F  L  L  P  L  H  I  H  *  I  P  L  I  N  C  L  I  P  L  L  L  L  A  L  T  Y  D  I  S  D  S  *  M  A  L  F  L  L  Y  L  C  F  L  F  L  F  L  A  L  I  L  F  L  L  L  *  L  F  L  D  P  F  L  F  S  G  *  P  L  L  A  V  L  K  N  S  L  F  T  Q  L  E  I  Q  G  N  L  I  M  G  S  F  M  V  L  V  S  *  I  W  R  V  F  C  *  L  E  L  N  Q  G  I  R  G  L  V  F  Y  G  G  I  A  K  R  *  Q  L  *  S  *  *  A  V  K  G  L  V  I  K  V  L  F  *  H  F  F  S  V  *  R  V  F  K  N  W  N  *  E  L  V  G  Q  L  L  M  G  F  C  </second_frame>
            <third_frame>   V  E  Y  G  F  Y  T  L  *  *  T  S  P  R  N  I  P  P  P  S  S  T  V  C  R  L  C  F  F  S  L  *  A  V  A  S  S  S  S  F  F  N  Y  F  S  F  Y  L  F  Y  *  N  P  F  D  P  S  F  L  I  F  S  Q  F  S  S  F  F  I  Y  S  F  C  Y  H  Y  T  Y  T  R  F  L  *  S  I  A  *  F  R  C  F  F  L  P  *  P  T  T  S  P  I  L  E  W  L  C  F  Y  F  I  S  V  F  S  F  C  F  L  P  *  S  C  F  S  C  C  N  S  F  *  T  P  F  F  S  L  G  N  P  F  W  L  S  *  R  T  L  Y  L  L  S  W  K  F  R  G  I  *  L  W  G  V  L  W  F  L  *  V  E  F  G  E  S  F  V  D  W  N  *  I  R  G  *  G  G  W  F  F  M  E  E  L  Q  K  G  N  N  F  E  A  D  K  L  *  R  G  W  *  S  R  F  F  F  N  I  S  S  V  F  R  G  S  S  R  I  G  I  E  N  L  *  D  N  C  *  W  G  F  V </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0011O23.1" strand="-"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="1931" stop="1215"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>717</number_coding_nucleotides>
                  <number_encoded_amino_acids>239</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VLSMDSILCDELLQEIFRRLPPPSAASVSLVCKRWLHLLRSSTTSLSICFIETPLIPLFSSFLSFHPFLSTLSVTITHTLDSSDQLLNSVASSCPNLRHLRFLNGSVSTLSLFSLSVSCPNLVSLAVTLFRPLSFLWVTPFGCLKELSIYSAGNSGEFDYGEFYGSCELNLESLLLTGIKSGDKGVGFLWRNCKKVTTLKLISCEGVGDQGSFLTFLQCLEGLQELELRTCRTIADGVL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="+" PGL_start="63747" PGL_stop="64319"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="63747" e_stop="64057"/>
            <exon e_start="64240" e_stop="64319"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.974"/>
          <exon-only e_score="0.938"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.974">
            <gDNA_exon_boundary e_start="63747" e_stop="64057" e_length="311"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="64058" i_stop="64239" i_length="182"/>
          </intron>
          <exon e_serial="2" e_score="0.938">
            <gDNA_exon_boundary e_start="64240" e_stop="64319" e_length="80"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63747" stop="64057"/>
              <exon start="64240" stop="64319"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U604209" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CATGTATCTGCGTCTTTCCTCCATTAACTGTTTTGTGACAATGTCAGATTTTCTTTGAATTCTTGCCTGCATTCCTTTTAAGAAAAATCAAGAACTTATCCATCTTTTTGAAGTTACACCTGTATTCTTAAGGCATATTTACAGGAAATAATGAAATTGTTATTTTCAAGAATATATTGACATTGCAAATATAAAGAAATTCAAGAAAACTTTCTTTCTCCAAAAAATTCTGTTGTTTTTCGTACTGTGTGTTGAAGATGTTCTAGAATTTGTTTTTGAGCCTTTTTATCTTGTATGATTTCAGAAGGGTT : GGTCGTTGTAGCCATAGGATTGCATGCATTACTCAACTAATAGGCCGCTCTGGCGGTTTGTATTCATTGGTTTGCATATA</gDNA_template>
            <first_frame> H  V  S  A  S  F  L  H  *  L  F  C  D  N  V  R  F  S  L  N  S  C  L  H  S  F  *  E  K  S  R  T  Y  P  S  F  *  S  Y  T  C  I  L  K  A  Y  L  Q  E  I  M  K  L  L  F  S  R  I  Y  *  H  C  K  Y  K  E  I  Q  E  N  F  L  S  P  K  N  S  V  V  F  R  T  V  C  *  R  C  S  R  I  C  F  *  A  F  L  S  C  M  I  S  E  G  L :   V  V  V  A  I  G  L  H  A  L  L  N  *  *  A  A  L  A  V  C  I  H  W  F  A  Y  </first_frame>
            <second_frame>  M  Y  L  R  L  S  S  I  N  C  F  V  T  M  S  D  F  L  *  I  L  A  C  I  P  F  K  K  N  Q  E  L  I  H  L  F  E  V  T  P  V  F  L  R  H  I  Y  R  K  *  *  N  C  Y  F  Q  E  Y  I  D  I  A  N  I  K  K  F  K  K  T  F  F  L  Q  K  I  L  L  F  F  V  L  C  V  E  D  V  L  E  F  V  F  E  P  F  Y  L  V  *  F  Q  K  G   : W  S  L  *  P  *  D  C  M  H  Y  S  T  N  R  P  L  W  R  F  V  F  I  G  L  H  I </second_frame>
            <third_frame>   C  I  C  V  F  P  P  L  T  V  L  *  Q  C  Q  I  F  F  E  F  L  P  A  F  L  L  R  K  I  K  N  L  S  I  F  L  K  L  H  L  Y  S  *  G  I  F  T  G  N  N  E  I  V  I  F  K  N  I  L  T  L  Q  I  *  R  N  S  R  K  L  S  F  S  K  K  F  C  C  F  S  Y  C  V  L  K  M  F  *  N  L  F  L  S  L  F  I  L  Y  D  F  R  R  V  :  G  R  C  S  H  R  I  A  C  I  T  Q  L  I  G  R  S  G  G  L  Y  S  L  V  C  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0011O23.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="+" PGL_start="72199" PGL_stop="72960"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="72199" e_stop="72960"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="72199" e_stop="72960" e_length="762"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72199" stop="72960"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U586042" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTTCACATTGGCCCGCTTTGAGAAAAGGGACATAGCTGAGGTCAACGAACCCAGTTTTCTCTCAAGTAAGAAGAATGCAGGACAAAACCCTTCGCCTCAATGGTTTTGCCTATCGGAAAGCTGACAACAAGAATTCTCTTTGGAAGTTGAAGGGCATTAATCTCAACGGAAAAAGGGGGAAACGTGACGACAAGCTACAATCTGTAACAGATTTCATCCAAGAGAACAGCCGGAAACTAGAAGAAGCAACATCAGGGCCAGGCGGCGGTTTCGGAATTGGCTGTGGCGTCGGTGTGGGTCTAGGAGCAATTGGTGGTCTAGGGTTAGGTGGTTCCGATTGGAACCATCTCAAACTCGTTTTCGGAGTGGGTATGGGTTGTGGTCTTGGTATCGGCTTCGGGTATGGCCAAGGAATTGGTGTTGGCTTTTCTTGGGAAGAATTTAAGTCTAGATTTTTTGAATCCAAAAGGAGTTCCAGAAAGCCCTTTGTAATTCAAATCTGAACTCTTTTTTGGCTATCATTTCCAATTTTTTCTATTTCCATAAGCTGCTTCTTTGCAATTTTGTTGTGGTAAAAGAGAATATTGTTATTTGTGCTTCACGAAAATGTTCTCTAAACTTGATGTTACATGTAACACTATCATACATCTCTCACCTAAAACGCTACAAAAGTTTGAGCAACTTGTACAATAAGAAAAAAATTTACAATTTTTACATGCATATGTAAAGCATTTGCCCTGTGATCAGTGTGGCAAGAATGAA</gDNA_template>
            <first_frame> F  H  I  G  P  L  *  E  K  G  H  S  *  G  Q  R  T  Q  F  S  L  K  *  E  E  C  R  T  K  P  F  A  S  M  V  L  P  I  G  K  L  T  T  R  I  L  F  G  S  *  R  A  L  I  S  T  E  K  G  G  N  V  T  T  S  Y  N  L  *  Q  I  S  S  K  R  T  A  G  N  *  K  K  Q  H  Q  G  Q  A  A  V  S  E  L  A  V  A  S  V  W  V  *  E  Q  L  V  V  *  G  *  V  V  P  I  G  T  I  S  N  S  F  S  E  W  V  W  V  V  V  L  V  S  A  S  G  M  A  K  E  L  V  L  A  F  L  G  K  N  L  S  L  D  F  L  N  P  K  G  V  P  E  S  P  L  *  F  K  S  E  L  F  F  G  Y  H  F  Q  F  F  L  F  P  *  A  A  S  L  Q  F  C  C  G  K  R  E  Y  C  Y  L  C  F  T  K  M  F  S  K  L  D  V  T  C  N  T  I  I  H  L  S  P  K  T  L  Q  K  F  E  Q  L  V  Q  *  E  K  N  L  Q  F  L  H  A  Y  V  K  H  L  P  C  D  Q  C  G  K  N  E </first_frame>
            <second_frame>  F  T  L  A  R  F  E  K  R  D  I  A  E  V  N  E  P  S  F  L  S  S  K  K  N  A  G  Q  N  P  S  P  Q  W  F  C  L  S  E  S  *  Q  Q  E  F  S  L  E  V  E  G  H  *  S  Q  R  K  K  G  E  T  *  R  Q  A  T  I  C  N  R  F  H  P  R  E  Q  P  E  T  R  R  S  N  I  R  A  R  R  R  F  R  N  W  L  W  R  R  C  G  S  R  S  N  W  W  S  R  V  R  W  F  R  L  E  P  S  Q  T  R  F  R  S  G  Y  G  L  W  S  W  Y  R  L  R  V  W  P  R  N  W  C  W  L  F  L  G  R  I  *  V  *  I  F  *  I  Q  K  E  F  Q  K  A  L  C  N  S  N  L  N  S  F  L  A  I  I  S  N  F  F  Y  F  H  K  L  L  L  C  N  F  V  V  V  K  E  N  I  V  I  C  A  S  R  K  C  S  L  N  L  M  L  H  V  T  L  S  Y  I  S  H  L  K  R  Y  K  S  L  S  N  L  Y  N  K  K  K  I  Y  N  F  Y  M  H  M  *  S  I  C  P  V  I  S  V  A  R  M   </second_frame>
            <third_frame>   S  H  W  P  A  L  R  K  G  T  *  L  R  S  T  N  P  V  F  S  Q  V  R  R  M  Q  D  K  T  L  R  L  N  G  F  A  Y  R  K  A  D  N  K  N  S  L  W  K  L  K  G  I  N  L  N  G  K  R  G  K  R  D  D  K  L  Q  S  V  T  D  F  I  Q  E  N  S  R  K  L  E  E  A  T  S  G  P  G  G  G  F  G  I  G  C  G  V  G  V  G  L  G  A  I  G  G  L  G  L  G  G  S  D  W  N  H  L  K  L  V  F  G  V  G  M  G  C  G  L  G  I  G  F  G  Y  G  Q  G  I  G  V  G  F  S  W  E  E  F  K  S  R  F  F  E  S  K  R  S  S  R  K  P  F  V  I  Q  I  *  T  L  F  W  L  S  F  P  I  F  S  I  S  I  S  C  F  F  A  I  L  L  W  *  K  R  I  L  L  F  V  L  H  E  N  V  L  *  T  *  C  Y  M  *  H  Y  H  T  S  L  T  *  N  A  T  K  V  *  A  T  C  T  I  R  K  K  F  T  I  F  T  C  I  C  K  A  F  A  L  *  S  V  W  Q  E  *  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0011O23.1" strand="+"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="72234" stop="72701"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>465</number_coding_nucleotides>
                  <number_encoded_amino_acids>155</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LRSTNPVFSQVRRMQDKTLRLNGFAYRKADNKNSLWKLKGINLNGKRGKRDDKLQSVTDFIQENSRKLEEATSGPGGGFGIGCGVGVGLGAIGGLGLGGSDWNHLKLVFGVGMGCGLGIGFGYGQGIGVGFSWEEFKSRFFESKRSSRKPFVIQI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="-" PGL_start="76680" PGL_stop="74045"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="76680" e_stop="76261"/>
            <exon e_start="75992" e_stop="75912"/>
            <exon e_start="75225" e_stop="74962"/>
            <exon e_start="74871" e_stop="74784"/>
            <exon e_start="74680" e_stop="74571"/>
            <exon e_start="74461" e_stop="74371"/>
            <exon e_start="74233" e_stop="74045"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.912" acc_prob="0.745" e_score="0.990"/>
          <exon-intron don_prob="0.996" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.167" e_score="1.000"/>
          <exon-intron don_prob="0.941" acc_prob="0.969" e_score="0.989"/>
          <exon-intron don_prob="0.971" acc_prob="0.971" e_score="0.945"/>
          <exon-intron don_prob="0.301" acc_prob="0.223" e_score="0.967"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.990">
            <gDNA_exon_boundary e_start="76680" e_stop="76261" e_length="420"/>
          </exon>
          <intron i_serial="1" don_prob="0.912" acc_prob="0.745">
            <gDNA_intron_boundary i_start="76260" i_stop="75993" i_length="268"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="75992" e_stop="75912" e_length="81"/>
          </exon>
          <intron i_serial="2" don_prob="0.996" acc_prob="0.994">
            <gDNA_intron_boundary i_start="75911" i_stop="75226" i_length="686"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="75225" e_stop="74962" e_length="264"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.167">
            <gDNA_intron_boundary i_start="74961" i_stop="74872" i_length="90"/>
          </intron>
          <exon e_serial="4" e_score="0.989">
            <gDNA_exon_boundary e_start="74871" e_stop="74784" e_length="88"/>
          </exon>
          <intron i_serial="4" don_prob="0.941" acc_prob="0.969">
            <gDNA_intron_boundary i_start="74783" i_stop="74681" i_length="103"/>
          </intron>
          <exon e_serial="5" e_score="0.945">
            <gDNA_exon_boundary e_start="74680" e_stop="74571" e_length="110"/>
          </exon>
          <intron i_serial="5" don_prob="0.971" acc_prob="0.971">
            <gDNA_intron_boundary i_start="74570" i_stop="74462" i_length="109"/>
          </intron>
          <exon e_serial="6" e_score="0.967">
            <gDNA_exon_boundary e_start="74461" e_stop="74371" e_length="91"/>
          </exon>
          <intron i_serial="6" don_prob="0.301" acc_prob="0.223">
            <gDNA_intron_boundary i_start="74370" i_stop="74234" i_length="137"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="74233" e_stop="74045" e_length="189"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76680" stop="76261"/>
              <exon start="75992" stop="75912"/>
              <exon start="75225" stop="74962"/>
              <exon start="74871" stop="74784"/>
              <exon start="74680" stop="74571"/>
              <exon start="74461" stop="74371"/>
              <exon start="74233" stop="74045"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U569873" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTCTTCTTCCTTGCTACTTCACATCATCACTGCTGTTTTTGTTATTTTTTCTGCTTACAGAATCAGTGTAGCTGTGAATTATAAATGGTGAAACTATAGCTGAAGTGTACTACTTCCTTTGTTTATTAGTTACAATTCATCGTGGATAAGGACTTTATTTAAAAAATATTGTGTGGACATACGTGTTTTTGTGCTTGCTTTTTTATATGTGGAATCTGGATCTTGCTGTCACTGTCGTCAATACTGTTCTTATTTATTAAGTATTACTTTTAATTAATTGTTTTGATTCATTATTAATAATCAGGGTTTCTTTCCATTTTCTAATTTTGATTCATTTATTGCTTTGAATCGACAATGCCATGGTGGGATTTGAGATCTGTTTTCGTTTTCAAGAATTTCAGATGCTTTTCGCAGTCTCAG : AACGGATTAAGTCAAAGGTTGGAAACTTCTGCTGGATTTTCTCAACTGTTCCGGCCGTTGATAGCCCACAAGAAACACCAG : GGTAGAATGAGGGATGCCCAGCCTGGATCACATACTGTGAGCGTGAGGTCTCATGGTGTGACGGTTGCATCATATACAGTGAGGTCCCATGGTATAACAGTGGCAAGGACTCATTTAAATGACTGGATGATCCTAATACTACTTTTGGGGATAGTTGTCCTTCTGAATGTTATCCATCCGTTTTACCGGTTTGTTGGGAAAGACATGATGGAAGACCTCAAGTATCCTTTAAAAAGTAATACTGTACCTTTTTGGGCTGTGCCA : GTGTATGCTGTTCTGCTGCCTATGGTTGTATTTCTGCTCATTTATTTTCGGCGAAGAGATGTCTATGATCTTCATCATGCCATACTGG : GCCTTTTGTTCTCTGTTGTGGTAACAGCTGTTATCACAGGTGCTATAAAAGATGCAGTTGGAAGGCCTAGGCCAGACTTCTTCTGGCGCTGTTTTCCAGATGGAAAGGAA : GTTTACGATAAATGGGGAGATGTTGTATGCCATGGTGACAAAAATGTTGTCAGGGAAGGGCATAAAAGTTTTCCAAGTGGTCATACCTCCT : TGTCCTTTGCTGGTCTTGGCTTTCTATCGCTTTATTTATCTGGCAAGATACAAGTCTTTGACTGTAGAGGACATGTTGCTAAACTGTGTCTCGTATTACTTCCACTTCTTCTTGCATCTCTGGTTGCCATTTCTCGGGTGGATGACTATTGGCATCATTGGCAGGATGTGTTTGCTGGAGGTCTGATTG</gDNA_template>
            <first_frame> F  F  F  L  A  T  S  H  H  H  C  C  F  C  Y  F  F  C  L  Q  N  Q  C  S  C  E  L  *  M  V  K  L  *  L  K  C  T  T  S  F  V  Y  *  L  Q  F  I  V  D  K  D  F  I  *  K  I  L  C  G  H  T  C  F  C  A  C  F  F  I  C  G  I  W  I  L  L  S  L  S  S  I  L  F  L  F  I  K  Y  Y  F  *  L  I  V  L  I  H  Y  *  *  S  G  F  L  S  I  F  *  F  *  F  I  Y  C  F  E  S  T  M  P  W  W  D  L  R  S  V  F  V  F  K  N  F  R  C  F  S  Q  S  Q  :  N  G  L  S  Q  R  L  E  T  S  A  G  F  S  Q  L  F  R  P  L  I  A  H  K  K  H  Q  :  G  R  M  R  D  A  Q  P  G  S  H  T  V  S  V  R  S  H  G  V  T  V  A  S  Y  T  V  R  S  H  G  I  T  V  A  R  T  H  L  N  D  W  M  I  L  I  L  L  L  G  I  V  V  L  L  N  V  I  H  P  F  Y  R  F  V  G  K  D  M  M  E  D  L  K  Y  P  L  K  S  N  T  V  P  F  W  A  V  P  :  V  Y  A  V  L  L  P  M  V  V  F  L  L  I  Y  F  R  R  R  D  V  Y  D  L  H  H  A  I  L   : G  L  L  F  S  V  V  V  T  A  V  I  T  G  A  I  K  D  A  V  G  R  P  R  P  D  F  F  W  R  C  F  P  D  G  K  E  :  V  Y  D  K  W  G  D  V  V  C  H  G  D  K  N  V  V  R  E  G  H  K  S  F  P  S  G  H  T  S   : L  S  F  A  G  L  G  F  L  S  L  Y  L  S  G  K  I  Q  V  F  D  C  R  G  H  V  A  K  L  C  L  V  L  L  P  L  L  L  A  S  L  V  A  I  S  R  V  D  D  Y  W  H  H  W  Q  D  V  F  A  G  G  L  I  </first_frame>
            <second_frame>  S  S  S  L  L  L  H  I  I  T  A  V  F  V  I  F  S  A  Y  R  I  S  V  A  V  N  Y  K  W  *  N  Y  S  *  S  V  L  L  P  L  F  I  S  Y  N  S  S  W  I  R  T  L  F  K  K  Y  C  V  D  I  R  V  F  V  L  A  F  L  Y  V  E  S  G  S  C  C  H  C  R  Q  Y  C  S  Y  L  L  S  I  T  F  N  *  L  F  *  F  I  I  N  N  Q  G  F  F  P  F  S  N  F  D  S  F  I  A  L  N  R  Q  C  H  G  G  I  *  D  L  F  S  F  S  R  I  S  D  A  F  R  S  L  R :   T  D  *  V  K  G  W  K  L  L  L  D  F  L  N  C  S  G  R  *  *  P  T  R  N  T  R :   V  E  *  G  M  P  S  L  D  H  I  L  *  A  *  G  L  M  V  *  R  L  H  H  I  Q  *  G  P  M  V  *  Q  W  Q  G  L  I  *  M  T  G  *  S  *  Y  Y  F  W  G  *  L  S  F  *  M  L  S  I  R  F  T  G  L  L  G  K  T  *  W  K  T  S  S  I  L  *  K  V  I  L  Y  L  F  G  L  C  Q :   C  M  L  F  C  C  L  W  L  Y  F  C  S  F  I  F  G  E  E  M  S  M  I  F  I  M  P  Y  W  :  A  F  C  S  L  L  W  *  Q  L  L  S  Q  V  L  *  K  M  Q  L  E  G  L  G  Q  T  S  S  G  A  V  F  Q  M  E  R  K :   F  T  I  N  G  E  M  L  Y  A  M  V  T  K  M  L  S  G  K  G  I  K  V  F  Q  V  V  I  P  P  :  C  P  L  L  V  L  A  F  Y  R  F  I  Y  L  A  R  Y  K  S  L  T  V  E  D  M  L  L  N  C  V  S  Y  Y  F  H  F  F  L  H  L  W  L  P  F  L  G  W  M  T  I  G  I  I  G  R  M  C  L  L  E  V  *  L </second_frame>
            <third_frame>   L  L  P  C  Y  F  T  S  S  L  L  F  L  L  F  F  L  L  T  E  S  V  *  L  *  I  I  N  G  E  T  I  A  E  V  Y  Y  F  L  C  L  L  V  T  I  H  R  G  *  G  L  Y  L  K  N  I  V  W  T  Y  V  F  L  C  L  L  F  Y  M  W  N  L  D  L  A  V  T  V  V  N  T  V  L  I  Y  *  V  L  L  L  I  N  C  F  D  S  L  L  I  I  R  V  S  F  H  F  L  I  L  I  H  L  L  L  *  I  D  N  A  M  V  G  F  E  I  C  F  R  F  Q  E  F  Q  M  L  F  A  V  S   : E  R  I  K  S  K  V  G  N  F  C  W  I  F  S  T  V  P  A  V  D  S  P  Q  E  T  P   : G  *  N  E  G  C  P  A  W  I  T  Y  C  E  R  E  V  S  W  C  D  G  C  I  I  Y  S  E  V  P  W  Y  N  S  G  K  D  S  F  K  *  L  D  D  P  N  T  T  F  G  D  S  C  P  S  E  C  Y  P  S  V  L  P  V  C  W  E  R  H  D  G  R  P  Q  V  S  F  K  K  *  Y  C  T  F  L  G  C  A   : S  V  C  C  S  A  A  Y  G  C  I  S  A  H  L  F  S  A  K  R  C  L  *  S  S  S  C  H  T  G :   P  F  V  L  C  C  G  N  S  C  Y  H  R  C  Y  K  R  C  S  W  K  A  *  A  R  L  L  L  A  L  F  S  R  W  K  G   : S  L  R  *  M  G  R  C  C  M  P  W  *  Q  K  C  C  Q  G  R  A  *  K  F  S  K  W  S  Y  L  L :   V  L  C  W  S  W  L  S  I  A  L  F  I  W  Q  D  T  S  L  *  L  *  R  T  C  C  *  T  V  S  R  I  T  S  T  S  S  C  I  S  G  C  H  F  S  G  G  *  L  L  A  S  L  A  G  C  V  C  W  R  S  D   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0011O23.1" strand="-"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="76350" stop="76261"/>
                    <exon start="75992" stop="75912"/>
                    <exon start="75225" stop="74962"/>
                    <exon start="74871" stop="74784"/>
                    <exon start="74680" stop="74571"/>
                    <exon start="74461" stop="74371"/>
                    <exon start="74233" stop="74046"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>912</number_coding_nucleotides>
                  <number_encoded_amino_acids>304</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FIYCFESTMPWWDLRSVFVFKNFRCFSQSQNGLSQRLETSAGFSQLFRPLIAHKKHQGRMRDAQPGSHTVSVRSHGVTVASYTVRSHGITVARTHLNDWMILILLLGIVVLLNVIHPFYRFVGKDMMEDLKYPLKSNTVPFWAVPVYAVLLPMVVFLLIYFRRRDVYDLHHAILGLLFSVVVTAVITGAIKDAVGRPRPDFFWRCFPDGKEVYDKWGDVVCHGDKNVVREGHKSFPSGHTSLSFAGLGFLSLYLSGKIQVFDCRGHVAKLCLVLLPLLLASLVAISRVDDYWHHWQDVFAGGLI</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="+" PGL_start="82544" PGL_stop="83976"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="82544" e_stop="82784"/>
            <exon e_start="83721" e_stop="83976"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.992" e_score="0.963"/>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.963">
            <gDNA_exon_boundary e_start="82544" e_stop="82784" e_length="241"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.992">
            <gDNA_intron_boundary i_start="82785" i_stop="83720" i_length="936"/>
          </intron>
          <exon e_serial="2" e_score="0.996">
            <gDNA_exon_boundary e_start="83721" e_stop="83976" e_length="256"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82544" stop="82784"/>
              <exon start="83721" stop="83976"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U600969" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GACAAGGTGATAATTTGAGTGCAATCGGAGGGAGTGCTGGAGATGCCAAGCAAACATTGGATTTTGGTGGTGGTTCAGTGCCCGAGTCTATGGTTTTGGAGACGAGCTCTTCATTTGGGTCGACCAGTTCTTCCATTTCTATGTCTAATATGCCTGCTATTGGAGTTCAAGCCGAGGATGGTGGCGTCAATTTGCAGGACAAAAGAGTGAGAGTGCCCTCATCATCAGCTTCAATAGAGAG : CGATAGTATCATGGGAGGTGCGGGTTTTCAACCTAAAGTTGGAATTCACCAAGAACCACTTATTCAAGTTATGTCCAGTATGGCCTCCCACAGTCTCTTCGAAGCAGAAGGCTCCAATGCCAGTCCCTCTCTCATTCAGACGCCAAAAATGGTTCAGGTTTCTGGGTATCCACTACCTCAGACATTGGATGGGAAGCAGCCCCAACCTGGAATTCAGTATGTTCATGGCGGTGCCTGTTATGTACCTCATTATCCT</gDNA_template>
            <first_frame> D  K  V  I  I  *  V  Q  S  E  G  V  L  E  M  P  S  K  H  W  I  L  V  V  V  Q  C  P  S  L  W  F  W  R  R  A  L  H  L  G  R  P  V  L  P  F  L  C  L  I  C  L  L  L  E  F  K  P  R  M  V  A  S  I  C  R  T  K  E  *  E  C  P  H  H  Q  L  Q  *  R   : A  I  V  S  W  E  V  R  V  F  N  L  K  L  E  F  T  K  N  H  L  F  K  L  C  P  V  W  P  P  T  V  S  S  K  Q  K  A  P  M  P  V  P  L  S  F  R  R  Q  K  W  F  R  F  L  G  I  H  Y  L  R  H  W  M  G  S  S  P  N  L  E  F  S  M  F  M  A  V  P  V  M  Y  L  I  I   </first_frame>
            <second_frame>  T  R  *  *  F  E  C  N  R  R  E  C  W  R  C  Q  A  N  I  G  F  W  W  W  F  S  A  R  V  Y  G  F  G  D  E  L  F  I  W  V  D  Q  F  F  H  F  Y  V  *  Y  A  C  Y  W  S  S  S  R  G  W  W  R  Q  F  A  G  Q  K  S  E  S  A  L  I  I  S  F  N  R  E  :  R  *  Y  H  G  R  C  G  F  S  T  *  S  W  N  S  P  R  T  T  Y  S  S  Y  V  Q  Y  G  L  P  Q  S  L  R  S  R  R  L  Q  C  Q  S  L  S  H  S  D  A  K  N  G  S  G  F  W  V  S  T  T  S  D  I  G  W  E  A  A  P  T  W  N  S  V  C  S  W  R  C  L  L  C  T  S  L  S  </second_frame>
            <third_frame>   Q  G  D  N  L  S  A  I  G  G  S  A  G  D  A  K  Q  T  L  D  F  G  G  G  S  V  P  E  S  M  V  L  E  T  S  S  S  F  G  S  T  S  S  S  I  S  M  S  N  M  P  A  I  G  V  Q  A  E  D  G  G  V  N  L  Q  D  K  R  V  R  V  P  S  S  S  A  S  I  E  S :   D  S  I  M  G  G  A  G  F  Q  P  K  V  G  I  H  Q  E  P  L  I  Q  V  M  S  S  M  A  S  H  S  L  F  E  A  E  G  S  N  A  S  P  S  L  I  Q  T  P  K  M  V  Q  V  S  G  Y  P  L  P  Q  T  L  D  G  K  Q  P  Q  P  G  I  Q  Y  V  H  G  G  A  C  Y  V  P  H  Y  P </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0011O23.1" strand="+"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="82546" stop="82784"/>
                    <exon start="83721" stop="83976"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>495</number_coding_nucleotides>
                  <number_encoded_amino_acids>165</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QGDNLSAIGGSAGDAKQTLDFGGGSVPESMVLETSSSFGSTSSSISMSNMPAIGVQAEDGGVNLQDKRVRVPSSSASIESDSIMGGAGFQPKVGIHQEPLIQVMSSMASHSLFEAEGSNASPSLIQTPKMVQVSGYPLPQTLDGKQPQPGIQYVHGGACYVPHYP</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="+" PGL_start="83999" PGL_stop="84507"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="83999" e_stop="84507"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="83999" e_stop="84507" e_length="509"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83999" stop="84507"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U601338" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CCTGTTATCCATTTTATCAGGTTCCCATGCAGCAGCCACAACAAACTCCTTATCCTCTGAATCAACAATACCCAATATACTTGGTTCCTGTGCAGCAAATGCAATCTCACAGTATGTCAGTACTGCCCAACATTAATCATGCAGCAGTGATGGCGTCCAATCGGCCACCCTTGCATTCACAAAGTGTCATAAACCCTCCATCAGTAGCTTATAAGGAGGTCATGGCGGCTCAATCAGTGCCTGAGTCAGGTCCAAAAGTGTACACGACTGTCCCAACAGCATCACTACCCATTAGTGCGCCTTCTCAGACTCAGCAACAATATACTGTCCTTCCTGAACCACAGCTTACTTCCCAACCTGTCTCAACTGCATCAGTTCCTGCTGCAAATGATGCAAATGAGTTTGACGATGATCTTGCATACAATCAGATATATAAATCTCAGCCTCCTCCACCTTCTTTCATTTCCCAGTGCCAAACCATTACAAAGGGGGCGGCAGTATTACTGTCA</gDNA_template>
            <first_frame> P  V  I  H  F  I  R  F  P  C  S  S  H  N  K  L  L  I  L  *  I  N  N  T  Q  Y  T  W  F  L  C  S  K  C  N  L  T  V  C  Q  Y  C  P  T  L  I  M  Q  Q  *  W  R  P  I  G  H  P  C  I  H  K  V  S  *  T  L  H  Q  *  L  I  R  R  S  W  R  L  N  Q  C  L  S  Q  V  Q  K  C  T  R  L  S  Q  Q  H  H  Y  P  L  V  R  L  L  R  L  S  N  N  I  L  S  F  L  N  H  S  L  L  P  N  L  S  Q  L  H  Q  F  L  L  Q  M  M  Q  M  S  L  T  M  I  L  H  T  I  R  Y  I  N  L  S  L  L  H  L  L  S  F  P  S  A  K  P  L  Q  R  G  R  Q  Y  Y  C   </first_frame>
            <second_frame>  L  L  S  I  L  S  G  S  H  A  A  A  T  T  N  S  L  S  S  E  S  T  I  P  N  I  L  G  S  C  A  A  N  A  I  S  Q  Y  V  S  T  A  Q  H  *  S  C  S  S  D  G  V  Q  S  A  T  L  A  F  T  K  C  H  K  P  S  I  S  S  L  *  G  G  H  G  G  S  I  S  A  *  V  R  S  K  S  V  H  D  C  P  N  S  I  T  T  H  *  C  A  F  S  D  S  A  T  I  Y  C  P  S  *  T  T  A  Y  F  P  T  C  L  N  C  I  S  S  C  C  K  *  C  K  *  V  *  R  *  S  C  I  Q  S  D  I  *  I  S  A  S  S  T  F  F  H  F  P  V  P  N  H  Y  K  G  G  G  S  I  T  V  </second_frame>
            <third_frame>   C  Y  P  F  Y  Q  V  P  M  Q  Q  P  Q  Q  T  P  Y  P  L  N  Q  Q  Y  P  I  Y  L  V  P  V  Q  Q  M  Q  S  H  S  M  S  V  L  P  N  I  N  H  A  A  V  M  A  S  N  R  P  P  L  H  S  Q  S  V  I  N  P  P  S  V  A  Y  K  E  V  M  A  A  Q  S  V  P  E  S  G  P  K  V  Y  T  T  V  P  T  A  S  L  P  I  S  A  P  S  Q  T  Q  Q  Q  Y  T  V  L  P  E  P  Q  L  T  S  Q  P  V  S  T  A  S  V  P  A  A  N  D  A  N  E  F  D  D  D  L  A  Y  N  Q  I  Y  K  S  Q  P  P  P  P  S  F  I  S  Q  C  Q  T  I  T  K  G  A  A  V  L  L  S </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0011O23.1" strand="+"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="84001" stop="84507"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>507</number_coding_nucleotides>
                  <number_encoded_amino_acids>169</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CYPFYQVPMQQPQQTPYPLNQQYPIYLVPVQQMQSHSMSVLPNINHAAVMASNRPPLHSQSVINPPSVAYKEVMAAQSVPESGPKVYTTVPTASLPISAPSQTQQQYTVLPEPQLTSQPVSTASVPAANDANEFDDDLAYNQIYKSQPPPPSFISQCQTITKGAAVLLS</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="-" PGL_start="86437" PGL_stop="85399"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="86437" e_stop="85399"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.990"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.990">
            <gDNA_exon_boundary e_start="86437" e_stop="85399" e_length="1039"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="86437" stop="85399"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U576550" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GAGACAGCTTTCAGTTCATGGGTTCAATGGACGTTGTGAGGAATGAGCTCAAATGCATCTCAGAGGAATCAGCTCGATTAAAGAAAAAGGGTAACAAGGCAGACTCGACAATTCAGAACCTCAACACGAAGCTTCTGAGGGCAAAAGCCAAACTGGAAGCTGCATCCCACAATGAAGGAAAAGCAACCTCTATTGCTTCAAGTTTATTACTCAGTCTTGAACAATTGACAAATGAAGCTGAAGAATCTGAGAAAGAAAGAGACAATGCCATTGAGGAAGCTGCAAAAGTCGAAGAAGAAATACAGAAAACACAATCTGAAACAGTGTTGGCCGAGGAAAGATGGGAAGCTGCAATACAAGAGCTTGAAACAATCAAATCATCAGAAGCTACTGTCCTAAGAAACCTAAAAAGACTTACTGATGTAACTATGAAAAGTAGAGCATCCGCTTCCACCTCCACAATAACTATTTCCAGATTTGAGTATGAGTACTTAAAAGGACGTGCAGGACAGGCAGTTGAAATTGCTGATAAGAAAGTTGAAGCAGCTGAGGCTTGGGTAAAAGCTTTGCAAGCAAGTGAAAAGGAGATCTCAATGAAGACAGAGGTCATCAGAAAGGAAATCCAAGAGCTTAAGATGGAAGAAGAGCAAAAAGGCCTGAAAATGGAGCATTCACCTTCCGTAAGAATGTTGGTCGATATGCAGTTGCAGAAATGGGAGGAGATACATGGAAAAGACCTGGAGCAATCTCCGAACAGTTCACGTACAAAATCCAACTCAATAAGTGGAAAAATGACACCAGCTAGACGAGCTAAGTTCAGAAAGTCAGCATCTCCTGCACCTCGAACACCTAGAGCTTCTTCCTTCGCGGTTAGGAGAAGAAGAAAGGTAATACCAAACATAGCTAAGTTATTTATTAGCAAGAGCAATGATGAAAACCTGTAAGCTATATTATTGCAGCTGCAAATACTTGCCAAAGTTTTCTGATGTAAAAGATATGATCCCACTAAATCCTAGTGCTGTTTGTCTCTGCATGTTTT</gDNA_template>
            <first_frame> E  T  A  F  S  S  W  V  Q  W  T  L  *  G  M  S  S  N  A  S  Q  R  N  Q  L  D  *  R  K  R  V  T  R  Q  T  R  Q  F  R  T  S  T  R  S  F  *  G  Q  K  P  N  W  K  L  H  P  T  M  K  E  K  Q  P  L  L  L  Q  V  Y  Y  S  V  L  N  N  *  Q  M  K  L  K  N  L  R  K  K  E  T  M  P  L  R  K  L  Q  K  S  K  K  K  Y  R  K  H  N  L  K  Q  C  W  P  R  K  D  G  K  L  Q  Y  K  S  L  K  Q  S  N  H  Q  K  L  L  S  *  E  T  *  K  D  L  L  M  *  L  *  K  V  E  H  P  L  P  P  P  Q  *  L  F  P  D  L  S  M  S  T  *  K  D  V  Q  D  R  Q  L  K  L  L  I  R  K  L  K  Q  L  R  L  G  *  K  L  C  K  Q  V  K  R  R  S  Q  *  R  Q  R  S  S  E  R  K  S  K  S  L  R  W  K  K  S  K  K  A  *  K  W  S  I  H  L  P  *  E  C  W  S  I  C  S  C  R  N  G  R  R  Y  M  E  K  T  W  S  N  L  R  T  V  H  V  Q  N  P  T  Q  *  V  E  K  *  H  Q  L  D  E  L  S  S  E  S  Q  H  L  L  H  L  E  H  L  E  L  L  P  S  R  L  G  E  E  E  R  *  Y  Q  T  *  L  S  Y  L  L  A  R  A  M  M  K  T  C  K  L  Y  Y  C  S  C  K  Y  L  P  K  F  S  D  V  K  D  M  I  P  L  N  P  S  A  V  C  L  C  M  F  </first_frame>
            <second_frame>  R  Q  L  S  V  H  G  F  N  G  R  C  E  E  *  A  Q  M  H  L  R  G  I  S  S  I  K  E  K  G  *  Q  G  R  L  D  N  S  E  P  Q  H  E  A  S  E  G  K  S  Q  T  G  S  C  I  P  Q  *  R  K  S  N  L  Y  C  F  K  F  I  T  Q  S  *  T  I  D  K  *  S  *  R  I  *  E  R  K  R  Q  C  H  *  G  S  C  K  S  R  R  R  N  T  E  N  T  I  *  N  S  V  G  R  G  K  M  G  S  C  N  T  R  A  *  N  N  Q  I  I  R  S  Y  C  P  K  K  P  K  K  T  Y  *  C  N  Y  E  K  *  S  I  R  F  H  L  H  N  N  Y  F  Q  I  *  V  *  V  L  K  R  T  C  R  T  G  S  *  N  C  *  *  E  S  *  S  S  *  G  L  G  K  S  F  A  S  K  *  K  G  D  L  N  E  D  R  G  H  Q  K  G  N  P  R  A  *  D  G  R  R  A  K  R  P  E  N  G  A  F  T  F  R  K  N  V  G  R  Y  A  V  A  E  M  G  G  D  T  W  K  R  P  G  A  I  S  E  Q  F  T  Y  K  I  Q  L  N  K  W  K  N  D  T  S  *  T  S  *  V  Q  K  V  S  I  S  C  T  S  N  T  *  S  F  F  L  R  G  *  E  K  K  K  G  N  T  K  H  S  *  V  I  Y  *  Q  E  Q  *  *  K  P  V  S  Y  I  I  A  A  A  N  T  C  Q  S  F  L  M  *  K  I  *  S  H  *  I  L  V  L  F  V  S  A  C  F </second_frame>
            <third_frame>   D  S  F  Q  F  M  G  S  M  D  V  V  R  N  E  L  K  C  I  S  E  E  S  A  R  L  K  K  K  G  N  K  A  D  S  T  I  Q  N  L  N  T  K  L  L  R  A  K  A  K  L  E  A  A  S  H  N  E  G  K  A  T  S  I  A  S  S  L  L  L  S  L  E  Q  L  T  N  E  A  E  E  S  E  K  E  R  D  N  A  I  E  E  A  A  K  V  E  E  E  I  Q  K  T  Q  S  E  T  V  L  A  E  E  R  W  E  A  A  I  Q  E  L  E  T  I  K  S  S  E  A  T  V  L  R  N  L  K  R  L  T  D  V  T  M  K  S  R  A  S  A  S  T  S  T  I  T  I  S  R  F  E  Y  E  Y  L  K  G  R  A  G  Q  A  V  E  I  A  D  K  K  V  E  A  A  E  A  W  V  K  A  L  Q  A  S  E  K  E  I  S  M  K  T  E  V  I  R  K  E  I  Q  E  L  K  M  E  E  E  Q  K  G  L  K  M  E  H  S  P  S  V  R  M  L  V  D  M  Q  L  Q  K  W  E  E  I  H  G  K  D  L  E  Q  S  P  N  S  S  R  T  K  S  N  S  I  S  G  K  M  T  P  A  R  R  A  K  F  R  K  S  A  S  P  A  P  R  T  P  R  A  S  S  F  A  V  R  R  R  R  K  V  I  P  N  I  A  K  L  F  I  S  K  S  N  D  E  N  L  *  A  I  L  L  Q  L  Q  I  L  A  K  V  F  *  C  K  R  Y  D  P  T  K  S  *  C  C  L  S  L  H  V   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0011O23.1" strand="-"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="86435" stop="85494"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>939</number_coding_nucleotides>
                  <number_encoded_amino_acids>313</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DSFQFMGSMDVVRNELKCISEESARLKKKGNKADSTIQNLNTKLLRAKAKLEAASHNEGKATSIASSLLLSLEQLTNEAEESEKERDNAIEEAAKVEEEIQKTQSETVLAEERWEAAIQELETIKSSEATVLRNLKRLTDVTMKSRASASTSTITISRFEYEYLKGRAGQAVEIADKKVEAAEAWVKALQASEKEISMKTEVIRKEIQELKMEEEQKGLKMEHSPSVRMLVDMQLQKWEEIHGKDLEQSPNSSRTKSNSISGKMTPARRAKFRKSASPAPRTPRASSFAVRRRRKVIPNIAKLFISKSNDENL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="-" PGL_start="87830" PGL_stop="86838"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="87830" e_stop="87569"/>
            <exon e_start="87443" e_stop="87321"/>
            <exon e_start="87248" e_stop="86838"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.446" e_score="0.889"/>
          <exon-intron don_prob="0.993" acc_prob="0.795" e_score="0.992"/>
          <exon-only e_score="0.981"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.889">
            <gDNA_exon_boundary e_start="87830" e_stop="87569" e_length="262"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.446">
            <gDNA_intron_boundary i_start="87568" i_stop="87444" i_length="125"/>
          </intron>
          <exon e_serial="2" e_score="0.992">
            <gDNA_exon_boundary e_start="87443" e_stop="87321" e_length="123"/>
          </exon>
          <intron i_serial="2" don_prob="0.993" acc_prob="0.795">
            <gDNA_intron_boundary i_start="87320" i_stop="87249" i_length="72"/>
          </intron>
          <exon e_serial="3" e_score="0.981">
            <gDNA_exon_boundary e_start="87248" e_stop="86838" e_length="411"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="87830" stop="87569"/>
              <exon start="87443" stop="87321"/>
              <exon start="87248" stop="86838"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U576055" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAGAAAAGACGATAAAACTTTCTTGTTTTGCTGATTAGACGGAGTGAAGGGTAAGTAAATCATTTTGTGCCACTAGATTGATAGTTTTGAGTTGCCCCTTGGAGGAAAAGACAAGATTTTTGCTTGTAATAGCAGCCAATCATCAATAGCTTTATCCCTCCTCCTCAATTTTTCCCTTTATTTTTATGGAGCTCATAGCACCTGCTCCAACTGGCAATTCCAACATCATTTTTCTGATGTACTTTCCACCAACCATTAGCAG : AGCAATCCAGAAGGAGGGGAGAGTTTCATGAAAGAGAGCTTAGGGTCATCAGTTAAGGCAGCCATTGATTTGTACAAAGGAAATTCTGCAATGAACCAATCCTCAATTACCAAGTCTTTAGAG : AAGCCATATGCAAGAACCAGCCAACTTCACATAGCAAAAAGGGACATGGGACGACTGGGTGAGAGCAGAAAAGTTGCAGAGGTAGAAAAAGCCCAAGCAGAAACTGAGCTTTTGGACGCGAGAAAGATGGTGAAGGAGCTAAGTTCAAGGATAGAAGAGTTGAATTCAAGATTAAGTGTCCAGAATCAAGATATGGAGAAACTAAAGACGGCAAAAAGAGGGGGAAATTGGGGGATGCCACTTCGCAATCATCAGAATAATCAGCACTCCAAAGTAGTAGCAGAGTTGGTATATGCAAAAGAAGATCTGATTAAGCTTAAACAAGATATGGCTTCTATCGTAGAAGAAAAAAGAAGGGCAGAGCAAGATATAGAAACCTCTAATTTGAAAATGCAATCTTTTGCAAGCAAA</gDNA_template>
            <first_frame> K  K  R  R  *  N  F  L  V  L  L  I  R  R  S  E  G  *  V  N  H  F  V  P  L  D  *  *  F  *  V  A  P  W  R  K  R  Q  D  F  C  L  *  *  Q  P  I  I  N  S  F  I  P  P  P  Q  F  F  P  L  F  L  W  S  S  *  H  L  L  Q  L  A  I  P  T  S  F  F  *  C  T  F  H  Q  P  L  A   : E  Q  S  R  R  R  G  E  F  H  E  R  E  L  R  V  I  S  *  G  S  H  *  F  V  Q  R  K  F  C  N  E  P  I  L  N  Y  Q  V  F  R   : E  A  I  C  K  N  Q  P  T  S  H  S  K  K  G  H  G  T  T  G  *  E  Q  K  S  C  R  G  R  K  S  P  S  R  N  *  A  F  G  R  E  K  D  G  E  G  A  K  F  K  D  R  R  V  E  F  K  I  K  C  P  E  S  R  Y  G  E  T  K  D  G  K  K  R  G  K  L  G  D  A  T  S  Q  S  S  E  *  S  A  L  Q  S  S  S  R  V  G  I  C  K  R  R  S  D  *  A  *  T  R  Y  G  F  Y  R  R  R  K  K  K  G  R  A  R  Y  R  N  L  *  F  E  N  A  I  F  C  K  Q  </first_frame>
            <second_frame>  R  K  D  D  K  T  F  L  F  C  *  L  D  G  V  K  G  K  *  I  I  L  C  H  *  I  D  S  F  E  L  P  L  G  G  K  D  K  I  F  A  C  N  S  S  Q  S  S  I  A  L  S  L  L  L  N  F  S  L  Y  F  Y  G  A  H  S  T  C  S  N  W  Q  F  Q  H  H  F  S  D  V  L  S  T  N  H  *  Q  :  S  N  P  E  G  G  E  S  F  M  K  E  S  L  G  S  S  V  K  A  A  I  D  L  Y  K  G  N  S  A  M  N  Q  S  S  I  T  K  S  L  E  :  K  P  Y  A  R  T  S  Q  L  H  I  A  K  R  D  M  G  R  L  G  E  S  R  K  V  A  E  V  E  K  A  Q  A  E  T  E  L  L  D  A  R  K  M  V  K  E  L  S  S  R  I  E  E  L  N  S  R  L  S  V  Q  N  Q  D  M  E  K  L  K  T  A  K  R  G  G  N  W  G  M  P  L  R  N  H  Q  N  N  Q  H  S  K  V  V  A  E  L  V  Y  A  K  E  D  L  I  K  L  K  Q  D  M  A  S  I  V  E  E  K  R  R  A  E  Q  D  I  E  T  S  N  L  K  M  Q  S  F  A  S  K </second_frame>
            <third_frame>   E  K  T  I  K  L  S  C  F  A  D  *  T  E  *  R  V  S  K  S  F  C  A  T  R  L  I  V  L  S  C  P  L  E  E  K  T  R  F  L  L  V  I  A  A  N  H  Q  *  L  Y  P  S  S  S  I  F  P  F  I  F  M  E  L  I  A  P  A  P  T  G  N  S  N  I  I  F  L  M  Y  F  P  P  T  I  S  R :   A  I  Q  K  E  G  R  V  S  *  K  R  A  *  G  H  Q  L  R  Q  P  L  I  C  T  K  E  I  L  Q  *  T  N  P  Q  L  P  S  L  *  R :   S  H  M  Q  E  P  A  N  F  T  *  Q  K  G  T  W  D  D  W  V  R  A  E  K  L  Q  R  *  K  K  P  K  Q  K  L  S  F  W  T  R  E  R  W  *  R  S  *  V  Q  G  *  K  S  *  I  Q  D  *  V  S  R  I  K  I  W  R  N  *  R  R  Q  K  E  G  E  I  G  G  C  H  F  A  I  I  R  I  I  S  T  P  K  *  *  Q  S  W  Y  M  Q  K  K  I  *  L  S  L  N  K  I  W  L  L  S  *  K  K  K  E  G  Q  S  K  I  *  K  P  L  I  *  K  C  N  L  L  Q  A   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0011O23.1" strand="-"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="87571" stop="87569"/>
                    <exon start="87443" stop="87321"/>
                    <exon start="87248" stop="86838"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>537</number_coding_nucleotides>
                  <number_encoded_amino_acids>179</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QSNPEGGESFMKESLGSSVKAAIDLYKGNSAMNQSSITKSLEKPYARTSQLHIAKRDMGRLGESRKVAEVEKAQAETELLDARKMVKELSSRIEELNSRLSVQNQDMEKLKTAKRGGNWGMPLRNHQNNQHSKVVAELVYAKEDLIKLKQDMASIVEEKRRAEQDIETSNLKMQSFASK</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="+" PGL_start="90775" PGL_stop="94736"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="90775" e_stop="91156"/>
            <exon e_start="93452" e_stop="93604"/>
            <exon e_start="93913" e_stop="94091"/>
            <exon e_start="94653" e_stop="94736"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.942" e_score="0.992"/>
          <exon-intron don_prob="0.968" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.319" acc_prob="0.997" e_score="0.961"/>
          <exon-only e_score="0.881"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.992">
            <gDNA_exon_boundary e_start="90775" e_stop="91156" e_length="382"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.942">
            <gDNA_intron_boundary i_start="91157" i_stop="93451" i_length="2295"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="93452" e_stop="93604" e_length="153"/>
          </exon>
          <intron i_serial="2" don_prob="0.968" acc_prob="1.000">
            <gDNA_intron_boundary i_start="93605" i_stop="93912" i_length="308"/>
          </intron>
          <exon e_serial="3" e_score="0.961">
            <gDNA_exon_boundary e_start="93913" e_stop="94091" e_length="179"/>
          </exon>
          <intron i_serial="3" don_prob="0.319" acc_prob="0.997">
            <gDNA_intron_boundary i_start="94092" i_stop="94652" i_length="561"/>
          </intron>
          <exon e_serial="4" e_score="0.881">
            <gDNA_exon_boundary e_start="94653" e_stop="94736" e_length="84"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90775" stop="91156"/>
              <exon start="93452" stop="93604"/>
              <exon start="93913" stop="94091"/>
              <exon start="94653" stop="94736"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U587028" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GAGTTGTGCGTGACACTAAAGCTCCAGCCCTCCTCTTCCTCTCAAGGCTCGTTGTACAGCTTCTCGCACCGCAACTTCAACTTGGCTCCATCAAATTCCCTCCATTCCACCGATGCCATTGTATTGATCTCAAAATTTGAAACGATATGTTGATGTACAGTTGAAGACAGGAGAGGAGATCAAATGGACGTGGAGAAATCGTCCTTATGCAATTGCGTGGTGAATTTTCTCTTGGAAGAGAACTACTTGTTATCGGCATTCGAGCTCCTTCACGAGCTTCTCGATGATGGCCGTGACGATCAGGCAATTCGTCTCAAACAGTTCTTCTCTGATCCTTCCCAATTCCCTCCCGATCAGATCTCTCGCTTCAATTCTATCAGAG : TTGCAGATCCCCAAAGTCTGCTTGAAGAGAAAGAAGCTCTGGAAGAAAAGTTGGCACTCTGTGAATATGAGTTTCGTTTATCTCAAGAGGACATTGTACAGCTAAAGAGTGAGTTGCAAAAGAAAAGTCAGACTAGTCCTTGTCCAATAAGTG : ATTTAAAGATCGATCCCTCCGAAAACCATGGAACTGATTCTCAACAGCAGAAGAGGGAAGGTTCTTTTTCTGATTTGGGTCCTTTGAAGGATAATGAGCGGAAGGATTTGAACTATGCTGTAAAGGAGTATTTACTATTAGCAGGATATCGCTTGACTGCAATGACATTATTGGAAGAG : GTTACTGATCAAGACCTAGATGTTCAGCAGAACTCCTCTGCATGCATTCCAGATGCTTTGCGCCATTACTATTACCAGTACCTG</gDNA_template>
            <first_frame> E  L  C  V  T  L  K  L  Q  P  S  S  S  S  Q  G  S  L  Y  S  F  S  H  R  N  F  N  L  A  P  S  N  S  L  H  S  T  D  A  I  V  L  I  S  K  F  E  T  I  C  *  C  T  V  E  D  R  R  G  D  Q  M  D  V  E  K  S  S  L  C  N  C  V  V  N  F  L  L  E  E  N  Y  L  L  S  A  F  E  L  L  H  E  L  L  D  D  G  R  D  D  Q  A  I  R  L  K  Q  F  F  S  D  P  S  Q  F  P  P  D  Q  I  S  R  F  N  S  I  R   : V  A  D  P  Q  S  L  L  E  E  K  E  A  L  E  E  K  L  A  L  C  E  Y  E  F  R  L  S  Q  E  D  I  V  Q  L  K  S  E  L  Q  K  K  S  Q  T  S  P  C  P  I  S   : D  L  K  I  D  P  S  E  N  H  G  T  D  S  Q  Q  Q  K  R  E  G  S  F  S  D  L  G  P  L  K  D  N  E  R  K  D  L  N  Y  A  V  K  E  Y  L  L  L  A  G  Y  R  L  T  A  M  T  L  L  E  E  :  V  T  D  Q  D  L  D  V  Q  Q  N  S  S  A  C  I  P  D  A  L  R  H  Y  Y  Y  Q  Y  L </first_frame>
            <second_frame>  S  C  A  *  H  *  S  S  S  P  P  L  P  L  K  A  R  C  T  A  S  R  T  A  T  S  T  W  L  H  Q  I  P  S  I  P  P  M  P  L  Y  *  S  Q  N  L  K  R  Y  V  D  V  Q  L  K  T  G  E  E  I  K  W  T  W  R  N  R  P  Y  A  I  A  W  *  I  F  S  W  K  R  T  T  C  Y  R  H  S  S  S  F  T  S  F  S  M  M  A  V  T  I  R  Q  F  V  S  N  S  S  S  L  I  L  P  N  S  L  P  I  R  S  L  A  S  I  L  S  E  :  L  Q  I  P  K  V  C  L  K  R  K  K  L  W  K  K  S  W  H  S  V  N  M  S  F  V  Y  L  K  R  T  L  Y  S  *  R  V  S  C  K  R  K  V  R  L  V  L  V  Q  *  V  :  I  *  R  S  I  P  P  K  T  M  E  L  I  L  N  S  R  R  G  K  V  L  F  L  I  W  V  L  *  R  I  M  S  G  R  I  *  T  M  L  *  R  S  I  Y  Y  *  Q  D  I  A  *  L  Q  *  H  Y  W  K  R :   L  L  I  K  T  *  M  F  S  R  T  P  L  H  A  F  Q  M  L  C  A  I  T  I  T  S  T   </second_frame>
            <third_frame>   V  V  R  D  T  K  A  P  A  L  L  F  L  S  R  L  V  V  Q  L  L  A  P  Q  L  Q  L  G  S  I  K  F  P  P  F  H  R  C  H  C  I  D  L  K  I  *  N  D  M  L  M  Y  S  *  R  Q  E  R  R  S  N  G  R  G  E  I  V  L  M  Q  L  R  G  E  F  S  L  G  R  E  L  L  V  I  G  I  R  A  P  S  R  A  S  R  *  W  P  *  R  S  G  N  S  S  Q  T  V  L  L  *  S  F  P  I  P  S  R  S  D  L  S  L  Q  F  Y  Q  S :   C  R  S  P  K  S  A  *  R  E  R  S  S  G  R  K  V  G  T  L  *  I  *  V  S  F  I  S  R  G  H  C  T  A  K  E  *  V  A  K  E  K  S  D  *  S  L  S  N  K  * :   F  K  D  R  S  L  R  K  P  W  N  *  F  S  T  A  E  E  G  R  F  F  F  *  F  G  S  F  E  G  *  *  A  E  G  F  E  L  C  C  K  G  V  F  T  I  S  R  I  S  L  D  C  N  D  I  I  G  R   : G  Y  *  S  R  P  R  C  S  A  E  L  L  C  M  H  S  R  C  F  A  P  L  L  L  P  V  P  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0011O23.1" strand="+"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="90928" stop="91156"/>
                    <exon start="93452" stop="93604"/>
                    <exon start="93913" stop="94091"/>
                    <exon start="94653" stop="94736"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>645</number_coding_nucleotides>
                  <number_encoded_amino_acids>215</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CTVEDRRGDQMDVEKSSLCNCVVNFLLEENYLLSAFELLHELLDDGRDDQAIRLKQFFSDPSQFPPDQISRFNSIRVADPQSLLEEKEALEEKLALCEYEFRLSQEDIVQLKSELQKKSQTSPCPISDLKIDPSENHGTDSQQQKREGSFSDLGPLKDNERKDLNYAVKEYLLLAGYRLTAMTLLEEVTDQDLDVQQNSSACIPDALRHYYYQYL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="-" PGL_start="94167" PGL_stop="93976"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="94167" e_stop="93976"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="94167" e_stop="93976" e_length="192"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94167" stop="93976"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U564999" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GAATAAAATGCAATTCTTCTTCAGTTTAGTGATGAACATCAAGAAATCAGCAAGTCCCCTTTCAATCAATTACTACCTCTTCCAATAATGTCATTGCAGTCAAGCGATATCCTGCTAATAGTAAATACTCCTTTACAGCATAGTTCAAATCCTTCCGCTCATTATCCTTCAAAGGACCCAAATCAGAAAAAG</gDNA_template>
            <first_frame> E  *  N  A  I  L  L  Q  F  S  D  E  H  Q  E  I  S  K  S  P  F  N  Q  L  L  P  L  P  I  M  S  L  Q  S  S  D  I  L  L  I  V  N  T  P  L  Q  H  S  S  N  P  S  A  H  Y  P  S  K  D  P  N  Q  K  K </first_frame>
            <second_frame>  N  K  M  Q  F  F  F  S  L  V  M  N  I  K  K  S  A  S  P  L  S  I  N  Y  Y  L  F  Q  *  C  H  C  S  Q  A  I  S  C  *  *  *  I  L  L  Y  S  I  V  Q  I  L  P  L  I  I  L  Q  R  T  Q  I  R  K   </second_frame>
            <third_frame>   I  K  C  N  S  S  S  V  *  *  *  T  S  R  N  Q  Q  V  P  F  Q  S  I  T  T  S  S  N  N  V  I  A  V  K  R  Y  P  A  N  S  K  Y  S  F  T  A  *  F  K  S  F  R  S  L  S  F  K  G  P  K  S  E  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0011O23.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="+" PGL_start="97591" PGL_stop="101485"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="97591" e_stop="98137"/>
            <exon e_start="98224" e_stop="98438"/>
            <exon e_start="98554" e_stop="98671"/>
            <exon e_start="98758" e_stop="98890"/>
            <exon e_start="98986" e_stop="99181"/>
            <exon e_start="99260" e_stop="99365"/>
            <exon e_start="99444" e_stop="99584"/>
            <exon e_start="99679" e_stop="99802"/>
            <exon e_start="99920" e_stop="100407"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.997" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.993" acc_prob="0.934" e_score="1.000"/>
          <exon-intron don_prob="0.948" acc_prob="0.978" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.431" acc_prob="0.944" e_score="1.000"/>
          <exon-intron don_prob="0.843" acc_prob="0.928" e_score="0.962"/>
          <exon-intron don_prob="0.979" acc_prob="0.900" e_score="1.000"/>
          <exon-intron don_prob="0.900" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="97591" e_stop="98137" e_length="547"/>
          </exon>
          <intron i_serial="1" don_prob="0.997" acc_prob="0.000">
            <gDNA_intron_boundary i_start="98138" i_stop="98223" i_length="86"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="98224" e_stop="98438" e_length="215"/>
          </exon>
          <intron i_serial="2" don_prob="0.993" acc_prob="0.934">
            <gDNA_intron_boundary i_start="98439" i_stop="98553" i_length="115"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="98554" e_stop="98671" e_length="118"/>
          </exon>
          <intron i_serial="3" don_prob="0.948" acc_prob="0.978">
            <gDNA_intron_boundary i_start="98672" i_stop="98757" i_length="86"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="98758" e_stop="98890" e_length="133"/>
          </exon>
          <intron i_serial="4" don_prob="0.996" acc_prob="0.994">
            <gDNA_intron_boundary i_start="98891" i_stop="98985" i_length="95"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="98986" e_stop="99181" e_length="196"/>
          </exon>
          <intron i_serial="5" don_prob="0.431" acc_prob="0.944">
            <gDNA_intron_boundary i_start="99182" i_stop="99259" i_length="78"/>
          </intron>
          <exon e_serial="6" e_score="0.962">
            <gDNA_exon_boundary e_start="99260" e_stop="99365" e_length="106"/>
          </exon>
          <intron i_serial="6" don_prob="0.843" acc_prob="0.928">
            <gDNA_intron_boundary i_start="99366" i_stop="99443" i_length="78"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="99444" e_stop="99584" e_length="141"/>
          </exon>
          <intron i_serial="7" don_prob="0.979" acc_prob="0.900">
            <gDNA_intron_boundary i_start="99585" i_stop="99678" i_length="94"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="99679" e_stop="99802" e_length="124"/>
          </exon>
          <intron i_serial="8" don_prob="0.900" acc_prob="0.000">
            <gDNA_intron_boundary i_start="99803" i_stop="99919" i_length="117"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="99920" e_stop="100407" e_length="488"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="97591" stop="98137"/>
              <exon start="98224" stop="98438"/>
              <exon start="98554" stop="98671"/>
              <exon start="98758" stop="98890"/>
              <exon start="98986" stop="99181"/>
              <exon start="99260" stop="99365"/>
              <exon start="99444" stop="99452"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U571277" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="99312" stop="99365"/>
              <exon start="99444" stop="99584"/>
              <exon start="99679" stop="99802"/>
              <exon start="99920" stop="100407"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U594119" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GCGCCGCTTGCTAGTTGCTCAATCTTGTGGGGAACTTGCTGAATTCGTGCGTCCTGAGATTCGAGATTCTCTTATCTTGTCTATTGTGCAACAGCTCATTGAGGATTCTGCTACAGTTGTTCGGGAGGCTTCTGCTCATAACTTGGCGTTGCTTCTGCCTCTCTTCCCAAGTAGGGACAAATATTTCAAGGTCAGCCTCACTACATAAGCTTCGAGGCAATCATGGAGAAGAAATGTGACTTGAGAGAATTTCCCACAAAGTAAGCTCCGTAGTCTAGGAATGGAGCATTTTCCCTCCCCTGGTCTTAATGTGGCTGCCCAAACTGATTAGATGATAGCATATACATAAATGGATATTCTCCAATTCCTTTATTTTGTTATTGTGTGTGTAAAGGTTGAGGAGATGATGTTTCAATTGGTGTGTGATCCATCTGGAGTGGTAGTGGAAACAACAATCAAGGAACTTGTTCCAGCTTTAGTAAACTGGGGGAAGGAATTGGATCATTTACTACAAGTCTTACTATCTCATGCTTTGGGCTCTGCTCAG : CGTTGTCAACCACTTTCAGGGGTGGAAGGTTCTATCGAGTCACATCTTCGTGCTTTAGGAGAGAGAGAGCGATGGAACATAGATGTTCTGATGCGCTTACTGTCGGAGTTGTTTCCATTTGTACGCAAGAAAGCTATTGATACCTGTCCATTCCCATTGGTTTCGGACGATGAAAGACTAGTCTTTTCTACTTCAGTTCTTGAACAGTATGCTGG : AGGAAAGATGGACTGGCCTTCTTTTGAGTGGTTGCATATTGACTGCTTTTCAGCGTTGATTGAACTAGCCTCTCTATTACCTCAGAAGGAAGATAACCTAAGGAATCGAATCACGCGG : TTTTTATTGGCAGTTTCAGACCTGCTCGGGGAACCTTACCTGACACACATCATGCTACCTGTATTCTTGGTGGCAGTTGGTGATGATGGTGATTTATCATATTTCCCTGCAACGTGCCAATCAAGAATAAGAG : GTTTGAAACCGAAAACTGCAGTAGCTGAAAGACTTGCTACCATCGGTGTCCTGCCTCTTCTGCTGGCTGGTGTTTTAGGATCTCCTAGGAAGCATGAACTACTGACAGAGTACTTGAGAAATCTCTTGATTCAAACTTCAGGACAAGAGAGTCAGACAGTGAAGCGCGAGATTTTCTTTTCTGTTCGCTTTCTTTG : CACTTTCGATGAACATCACAATATGATTTTTAACATCCTCTGGGAAATGGTTGTGAGTTCTGAAATAAACATGAAGGCAACAGCTGCCAATCTTTTTAAAGTCATT : GTTCCATGTATTGATGCCAAGGTTGCCTCAACACATGTTTTGCCTGCTCTTGTAACGCTTGGTTCTGACCAAAACTTGAATGTGAAATATGCCAGTATTGATGCTTTTGGAGCTGTGGCGCAGCAGTATAAAAATGATGCG : ATTGTTGATAAAATACGTGTTCAAATGGATGCTTTTCTTGAGGATGGATCACATGAAGCTACGTTAGCTGTAGTTCGTGCATTGGTGATGGCAGTGCCACATACCACGGAGGGACTTAGAGATT : ATTTGTTGTCCAAGATTTTCTTACTTACAGCAACACCTCCTCCTTCAAGTGACATGATGCGTCGTCGTGAGAGAGCCAACACATTTTGTGAATCAATTCGTGCTCTTGATGCTACTGGTTTGCTCCTTTTAATTATTCTTCTTCTCTTTCATTCATCTCTTTACTTTCTGAAGATATAAATGTTCTTCAAAATGATCAGCCTCCAGGTTTAGCTGCTTCTTGAGATAAATCAGAGTACAATATACTATGTATTGCAGTGGACTGATACAGGTGGTTGATATCCTGATTTTTGGTTGTGAAACTACCTTTAGCAATCATGGTTGATCAAAGTGATTAGTTGAGTTTTTTCCCATCTAAGAAGAGTTAATTACCTAAAAATTGACCGATTTTTTACCTAAATACATGCCGAAGTTAACATAAATGGTTGATTGTGATTTGTTGGGTTTAGTGTGCATCCTTTTCTTGTTCATATTAATACAAGTGAGTGA</gDNA_template>
            <first_frame> A  P  L  A  S  C  S  I  L  W  G  T  C  *  I  R  A  S  *  D  S  R  F  S  Y  L  V  Y  C  A  T  A  H  *  G  F  C  Y  S  C  S  G  G  F  C  S  *  L  G  V  A  S  A  S  L  P  K  *  G  Q  I  F  Q  G  Q  P  H  Y  I  S  F  E  A  I  M  E  K  K  C  D  L  R  E  F  P  T  K  *  A  P  *  S  R  N  G  A  F  S  L  P  W  S  *  C  G  C  P  N  *  L  D  D  S  I  Y  I  N  G  Y  S  P  I  P  L  F  C  Y  C  V  C  K  G  *  G  D  D  V  S  I  G  V  *  S  I  W  S  G  S  G  N  N  N  Q  G  T  C  S  S  F  S  K  L  G  E  G  I  G  S  F  T  T  S  L  T  I  S  C  F  G  L  C  S   : A  L  S  T  T  F  R  G  G  R  F  Y  R  V  T  S  S  C  F  R  R  E  R  A  M  E  H  R  C  S  D  A  L  T  V  G  V  V  S  I  C  T  Q  E  S  Y  *  Y  L  S  I  P  I  G  F  G  R  *  K  T  S  L  F  Y  F  S  S  *  T  V  C  W  :  R  K  D  G  L  A  F  F  *  V  V  A  Y  *  L  L  F  S  V  D  *  T  S  L  S  I  T  S  E  G  R  *  P  K  E  S  N  H  A   : V  F  I  G  S  F  R  P  A  R  G  T  L  P  D  T  H  H  A  T  C  I  L  G  G  S  W  *  *  W  *  F  I  I  F  P  C  N  V  P  I  K  N  K  R :   F  E  T  E  N  C  S  S  *  K  T  C  Y  H  R  C  P  A  S  S  A  G  W  C  F  R  I  S  *  E  A  *  T  T  D  R  V  L  E  K  S  L  D  S  N  F  R  T  R  E  S  D  S  E  A  R  D  F  L  F  C  S  L  S  L  :  H  F  R  *  T  S  Q  Y  D  F  *  H  P  L  G  N  G  C  E  F  *  N  K  H  E  G  N  S  C  Q  S  F  *  S  H   : C  S  M  Y  *  C  Q  G  C  L  N  T  C  F  A  C  S  C  N  A  W  F  *  P  K  L  E  C  E  I  C  Q  Y  *  C  F  W  S  C  G  A  A  V  *  K  *  C   : D  C  *  *  N  T  C  S  N  G  C  F  S  *  G  W  I  T  *  S  Y  V  S  C  S  S  C  I  G  D  G  S  A  T  Y  H  G  G  T  *  R  L :   F  V  V  Q  D  F  L  T  Y  S  N  T  S  S  F  K  *  H  D  A  S  S  *  E  S  Q  H  I  L  *  I  N  S  C  S  *  C  Y  W  F  A  P  F  N  Y  S  S  S  L  S  F  I  S  L  L  S  E  D  I  N  V  L  Q  N  D  Q  P  P  G  L  A  A  S  *  D  K  S  E  Y  N  I  L  C  I  A  V  D  *  Y  R  W  L  I  S  *  F  L  V  V  K  L  P  L  A  I  M  V  D  Q  S  D  *  L  S  F  F  P  S  K  K  S  *  L  P  K  N  *  P  I  F  Y  L  N  T  C  R  S  *  H  K  W  L  I  V  I  C  W  V  *  C  A  S  F  S  C  S  Y  *  Y  K  *  V  </first_frame>
            <second_frame>  R  R  L  L  V  A  Q  S  C  G  E  L  A  E  F  V  R  P  E  I  R  D  S  L  I  L  S  I  V  Q  Q  L  I  E  D  S  A  T  V  V  R  E  A  S  A  H  N  L  A  L  L  L  P  L  F  P  S  R  D  K  Y  F  K  V  S  L  T  T  *  A  S  R  Q  S  W  R  R  N  V  T  *  E  N  F  P  Q  S  K  L  R  S  L  G  M  E  H  F  P  S  P  G  L  N  V  A  A  Q  T  D  *  M  I  A  Y  T  *  M  D  I  L  Q  F  L  Y  F  V  I  V  C  V  K  V  E  E  M  M  F  Q  L  V  C  D  P  S  G  V  V  V  E  T  T  I  K  E  L  V  P  A  L  V  N  W  G  K  E  L  D  H  L  L  Q  V  L  L  S  H  A  L  G  S  A  Q  :  R  C  Q  P  L  S  G  V  E  G  S  I  E  S  H  L  R  A  L  G  E  R  E  R  W  N  I  D  V  L  M  R  L  L  S  E  L  F  P  F  V  R  K  K  A  I  D  T  C  P  F  P  L  V  S  D  D  E  R  L  V  F  S  T  S  V  L  E  Q  Y  A  G :   G  K  M  D  W  P  S  F  E  W  L  H  I  D  C  F  S  A  L  I  E  L  A  S  L  L  P  Q  K  E  D  N  L  R  N  R  I  T  R  :  F  L  L  A  V  S  D  L  L  G  E  P  Y  L  T  H  I  M  L  P  V  F  L  V  A  V  G  D  D  G  D  L  S  Y  F  P  A  T  C  Q  S  R  I  R   : G  L  K  P  K  T  A  V  A  E  R  L  A  T  I  G  V  L  P  L  L  L  A  G  V  L  G  S  P  R  K  H  E  L  L  T  E  Y  L  R  N  L  L  I  Q  T  S  G  Q  E  S  Q  T  V  K  R  E  I  F  F  S  V  R  F  L  C :   T  F  D  E  H  H  N  M  I  F  N  I  L  W  E  M  V  V  S  S  E  I  N  M  K  A  T  A  A  N  L  F  K  V  I  :  V  P  C  I  D  A  K  V  A  S  T  H  V  L  P  A  L  V  T  L  G  S  D  Q  N  L  N  V  K  Y  A  S  I  D  A  F  G  A  V  A  Q  Q  Y  K  N  D  A  :  I  V  D  K  I  R  V  Q  M  D  A  F  L  E  D  G  S  H  E  A  T  L  A  V  V  R  A  L  V  M  A  V  P  H  T  T  E  G  L  R  D   : Y  L  L  S  K  I  F  L  L  T  A  T  P  P  P  S  S  D  M  M  R  R  R  E  R  A  N  T  F  C  E  S  I  R  A  L  D  A  T  G  L  L  L  L  I  I  L  L  L  F  H  S  S  L  Y  F  L  K  I  *  M  F  F  K  M  I  S  L  Q  V  *  L  L  L  E  I  N  Q  S  T  I  Y  Y  V  L  Q  W  T  D  T  G  G  *  Y  P  D  F  W  L  *  N  Y  L  *  Q  S  W  L  I  K  V  I  S  *  V  F  S  H  L  R  R  V  N  Y  L  K  I  D  R  F  F  T  *  I  H  A  E  V  N  I  N  G  *  L  *  F  V  G  F  S  V  H  P  F  L  V  H  I  N  T  S  E  * </second_frame>
            <third_frame>   A  A  C  *  L  L  N  L  V  G  N  L  L  N  S  C  V  L  R  F  E  I  L  L  S  C  L  L  C  N  S  S  L  R  I  L  L  Q  L  F  G  R  L  L  L  I  T  W  R  C  F  C  L  S  S  Q  V  G  T  N  I  S  R  S  A  S  L  H  K  L  R  G  N  H  G  E  E  M  *  L  E  R  I  S  H  K  V  S  S  V  V  *  E  W  S  I  F  P  P  L  V  L  M  W  L  P  K  L  I  R  *  *  H  I  H  K  W  I  F  S  N  S  F  I  L  L  L  C  V  *  R  L  R  R  *  C  F  N  W  C  V  I  H  L  E  W  *  W  K  Q  Q  S  R  N  L  F  Q  L  *  *  T  G  G  R  N  W  I  I  Y  Y  K  S  Y  Y  L  M  L  W  A  L  L  S :   V  V  N  H  F  Q  G  W  K  V  L  S  S  H  I  F  V  L  *  E  R  E  S  D  G  T  *  M  F  *  C  A  Y  C  R  S  C  F  H  L  Y  A  R  K  L  L  I  P  V  H  S  H  W  F  R  T  M  K  D  *  S  F  L  L  Q  F  L  N  S  M  L   : E  E  R  W  T  G  L  L  L  S  G  C  I  L  T  A  F  Q  R  *  L  N  *  P  L  Y  Y  L  R  R  K  I  T  *  G  I  E  S  R  G :   F  Y  W  Q  F  Q  T  C  S  G  N  L  T  *  H  T  S  C  Y  L  Y  S  W  W  Q  L  V  M  M  V  I  Y  H  I  S  L  Q  R  A  N  Q  E  *  E  :  V  *  N  R  K  L  Q  *  L  K  D  L  L  P  S  V  S  C  L  F  C  W  L  V  F  *  D  L  L  G  S  M  N  Y  *  Q  S  T  *  E  I  S  *  F  K  L  Q  D  K  R  V  R  Q  *  S  A  R  F  S  F  L  F  A  F  F   : A  L  S  M  N  I  T  I  *  F  L  T  S  S  G  K  W  L  *  V  L  K  *  T  *  R  Q  Q  L  P  I  F  L  K  S  L :   F  H  V  L  M  P  R  L  P  Q  H  M  F  C  L  L  L  *  R  L  V  L  T  K  T  *  M  *  N  M  P  V  L  M  L  L  E  L  W  R  S  S  I  K  M  M  R :   L  L  I  K  Y  V  F  K  W  M  L  F  L  R  M  D  H  M  K  L  R  *  L  *  F  V  H  W  *  W  Q  C  H  I  P  R  R  D  L  E  I  :  I  C  C  P  R  F  S  Y  L  Q  Q  H  L  L  L  Q  V  T  *  C  V  V  V  R  E  P  T  H  F  V  N  Q  F  V  L  L  M  L  L  V  C  S  F  *  L  F  F  F  S  F  I  H  L  F  T  F  *  R  Y  K  C  S  S  K  *  S  A  S  R  F  S  C  F  L  R  *  I  R  V  Q  Y  T  M  Y  C  S  G  L  I  Q  V  V  D  I  L  I  F  G  C  E  T  T  F  S  N  H  G  *  S  K  *  L  V  E  F  F  P  I  *  E  E  L  I  T  *  K  L  T  D  F  L  P  K  Y  M  P  K  L  T  *  M  V  D  C  D  L  L  G  L  V  C  I  L  F  L  F  I  L  I  Q  V  S   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0011O23.1" strand="+"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="97940" stop="98137"/>
                    <exon start="98224" stop="98438"/>
                    <exon start="98554" stop="98671"/>
                    <exon start="98758" stop="98890"/>
                    <exon start="98986" stop="99181"/>
                    <exon start="99260" stop="99365"/>
                    <exon start="99444" stop="99584"/>
                    <exon start="99679" stop="99802"/>
                    <exon start="99920" stop="100098"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1407</number_coding_nucleotides>
                  <number_encoded_amino_acids>469</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>MDILQFLYFVIVCVKVEEMMFQLVCDPSGVVVETTIKELVPALVNWGKELDHLLQVLLSHALGSAQRCQPLSGVEGSIESHLRALGERERWNIDVLMRLLSELFPFVRKKAIDTCPFPLVSDDERLVFSTSVLEQYAGGKMDWPSFEWLHIDCFSALIELASLLPQKEDNLRNRITRFLLAVSDLLGEPYLTHIMLPVFLVAVGDDGDLSYFPATCQSRIRGLKPKTAVAERLATIGVLPLLLAGVLGSPRKHELLTEYLRNLLIQTSGQESQTVKREIFFSVRFLCTFDEHHNMIFNILWEMVVSSEINMKATAANLFKVIVPCIDAKVASTHVLPALVTLGSDQNLNVKYASIDAFGAVAQQYKNDAIVDKIRVQMDAFLEDGSHEATLAVVRALVMAVPHTTEGLRDYLLSKIFLLTATPPPSSDMMRRRERANTFCESIRALDATGLLLLIILLLFHSSLYFLKI*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0011O23.1" strand="+"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="97605" stop="97829"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>222</number_coding_nucleotides>
                  <number_encoded_amino_acids>74</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LLNLVGNLLNSCVLRFEILLSCLLCNSSLRILLQLFGRLLLITWRCFCLSSQVGTNISRSASLHKLRGNHGEEM*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="99941" e_stop="100036"/>
            <exon e_start="100806" e_stop="101485"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.977" e_score="0.990"/>
          <exon-only e_score="0.999"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.990">
            <gDNA_exon_boundary e_start="99941" e_stop="100036" e_length="96"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.977">
            <gDNA_intron_boundary i_start="100037" i_stop="100805" i_length="769"/>
          </intron>
          <exon e_serial="2" e_score="0.999">
            <gDNA_exon_boundary e_start="100806" e_stop="101485" e_length="680"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="99941" stop="100036"/>
              <exon start="100806" stop="101485"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U594120" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TACTTACAGCAACACCTCCTCCTTCAAGTGACATGATGCGTCGTCGTGAGAGAGCCAACACATTTTGTGAATCAATTCGTGCTCTTGATGCTACTG : ATCTTTCTGCTTCAAGTGTCAGAGACTTCCTTCTACCTGCAATTCAAAATCTGTTAAAAGATGCTGATTCTCTTGATCCAGCACACAAAGAAGCTCTGGAGATCGTAATGAGGGAAAGATCTGGTGGAACATTTGATACGATTAGTAAGGTAATGGGTGCTCATCTGGGAATTGCGTCATCAGTAAGCAGCTTCTTTGGCGAAGGTGGTTTACTAGGGAAAAGGGAAGCTGGAGATCCAACATCACCACCAGCACCAGTGGAAGTTGAACCTCTGAGGCCTGTCCTCACACATGCAGCACCAGCAGAAGACACTAGATTTAGGCGGATCATGAGAGGTGGTTTTACAGACATGCTCAGAGGAAAAGCAAAGGGCGCTGGGGATACTCCCCCAAGTCAATGATAATGGCTCTTTCATCTGCAGGAGAATTAAAAAGGAAAGTAAGTTCTGTATGTTGTGCAATAGACTACAATGCTTCCATTTGTTGATTCTGCGCTGAAGTTTTCCCTTCACAGGGATGAAATTTTGCAATTTATTTCATTCTTTATGTACAAGAAACGTAATGAATTCGACAACAAAACGAGGAGAAAGTGTATACATTTACTAGTTGTACAAAATGATATGGGAGATTCATAGCTGTCTTGTTTTCATGTACTCTAACCAGTAACCAACAGACCTTTG</gDNA_template>
            <first_frame> Y  L  Q  Q  H  L  L  L  Q  V  T  *  C  V  V  V  R  E  P  T  H  F  V  N  Q  F  V  L  L  M  L  L  :  I  F  L  L  Q  V  S  E  T  S  F  Y  L  Q  F  K  I  C  *  K  M  L  I  L  L  I  Q  H  T  K  K  L  W  R  S  *  *  G  K  D  L  V  E  H  L  I  R  L  V  R  *  W  V  L  I  W  E  L  R  H  Q  *  A  A  S  L  A  K  V  V  Y  *  G  K  G  K  L  E  I  Q  H  H  H  Q  H  Q  W  K  L  N  L  *  G  L  S  S  H  M  Q  H  Q  Q  K  T  L  D  L  G  G  S  *  E  V  V  L  Q  T  C  S  E  E  K  Q  R  A  L  G  I  L  P  Q  V  N  D  N  G  S  F  I  C  R  R  I  K  K  E  S  K  F  C  M  L  C  N  R  L  Q  C  F  H  L  L  I  L  R  *  S  F  P  F  T  G  M  K  F  C  N  L  F  H  S  L  C  T  R  N  V  M  N  S  T  T  K  R  G  E  S  V  Y  I  Y  *  L  Y  K  M  I  W  E  I  H  S  C  L  V  F  M  Y  S  N  Q  *  P  T  D  L   </first_frame>
            <second_frame>  T  Y  S  N  T  S  S  F  K  *  H  D  A  S  S  *  E  S  Q  H  I  L  *  I  N  S  C  S  *  C  Y  * :   S  F  C  F  K  C  Q  R  L  P  S  T  C  N  S  K  S  V  K  R  C  *  F  S  *  S  S  T  Q  R  S  S  G  D  R  N  E  G  K  I  W  W  N  I  *  Y  D  *  *  G  N  G  C  S  S  G  N  C  V  I  S  K  Q  L  L  W  R  R  W  F  T  R  E  K  G  S  W  R  S  N  I  T  T  S  T  S  G  S  *  T  S  E  A  C  P  H  T  C  S  T  S  R  R  H  *  I  *  A  D  H  E  R  W  F  Y  R  H  A  Q  R  K  S  K  G  R  W  G  Y  S  P  K  S  M  I  M  A  L  S  S  A  G  E  L  K  R  K  V  S  S  V  C  C  A  I  D  Y  N  A  S  I  C  *  F  C  A  E  V  F  P  S  Q  G  *  N  F  A  I  Y  F  I  L  Y  V  Q  E  T  *  *  I  R  Q  Q  N  E  E  K  V  Y  T  F  T  S  C  T  K  *  Y  G  R  F  I  A  V  L  F  S  C  T  L  T  S  N  Q  Q  T  F  </second_frame>
            <third_frame>   L  T  A  T  P  P  P  S  S  D  M  M  R  R  R  E  R  A  N  T  F  C  E  S  I  R  A  L  D  A  T   : D  L  S  A  S  S  V  R  D  F  L  L  P  A  I  Q  N  L  L  K  D  A  D  S  L  D  P  A  H  K  E  A  L  E  I  V  M  R  E  R  S  G  G  T  F  D  T  I  S  K  V  M  G  A  H  L  G  I  A  S  S  V  S  S  F  F  G  E  G  G  L  L  G  K  R  E  A  G  D  P  T  S  P  P  A  P  V  E  V  E  P  L  R  P  V  L  T  H  A  A  P  A  E  D  T  R  F  R  R  I  M  R  G  G  F  T  D  M  L  R  G  K  A  K  G  A  G  D  T  P  P  S  Q  *  *  W  L  F  H  L  Q  E  N  *  K  G  K  *  V  L  Y  V  V  Q  *  T  T  M  L  P  F  V  D  S  A  L  K  F  S  L  H  R  D  E  I  L  Q  F  I  S  F  F  M  Y  K  K  R  N  E  F  D  N  K  T  R  R  K  C  I  H  L  L  V  V  Q  N  D  M  G  D  S  *  L  S  C  F  H  V  L  *  P  V  T  N  R  P  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0011O23.1" strand="+"/>
                <serials PGL_serial="11" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="99943" stop="100036"/>
                    <exon start="100806" stop="101206"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>492</number_coding_nucleotides>
                  <number_encoded_amino_acids>164</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LTATPPPSSDMMRRRERANTFCESIRALDATDLSASSVRDFLLPAIQNLLKDADSLDPAHKEALEIVMRERSGGTFDTISKVMGAHLGIASSVSSFFGEGGLLGKREAGDPTSPPAPVEVEPLRPVLTHAAPAEDTRFRRIMRGGFTDMLRGKAKGAGDTPPSQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="+" PGL_start="104323" PGL_stop="104825"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="104323" e_stop="104825"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.996">
            <gDNA_exon_boundary e_start="104323" e_stop="104825" e_length="503"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104323" stop="104825"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U579675" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTCATCCATCACTTCCATTACATTACTTAAAAAATTTCTCTTATAATTTAAATTGTATAATGAAAATGACTAAGGTTTGTTCTTTTGTGGCAGTAATGTTGGTGATGATCCTTGTTTGTGATCAATTTGGGGCTAACGAGGCGGCGACATGCAGCGCCTCGCAGCTGAGCCCGTGTTTGGGTGCGATCCAGGGTGGGACCGCACCATCACAGGATTGTTGTGCTAGGCTTAAGAACCAGCAGCCTTGCATTTGTGGATTTATGAAGGATCCTAATTTGAGGCAATATGTTAATTCTCCAAATGCTAGGAAAGTTGCTGGACAATGTGGTGTAAGCATTCCTAGTTGTTAATTAGGTTTACAACATTTTACTTGTTGTATACATATGGGTCTTATGTATTATGGAAAAAAATATATATATGTAAGACTTTAAATAAAAAATGGTTGTAATCTGTGTTCAAGTGTGTTATGATGAATGAATCTTGTGGCTTTTGATTTTATTTCT</gDNA_template>
            <first_frame> F  I  H  H  F  H  Y  I  T  *  K  I  S  L  I  I  *  I  V  *  *  K  *  L  R  F  V  L  L  W  Q  *  C  W  *  *  S  L  F  V  I  N  L  G  L  T  R  R  R  H  A  A  P  R  S  *  A  R  V  W  V  R  S  R  V  G  P  H  H  H  R  I  V  V  L  G  L  R  T  S  S  L  A  F  V  D  L  *  R  I  L  I  *  G  N  M  L  I  L  Q  M  L  G  K  L  L  D  N  V  V  *  A  F  L  V  V  N  *  V  Y  N  I  L  L  V  V  Y  I  W  V  L  C  I  M  E  K  N  I  Y  M  *  D  F  K  *  K  M  V  V  I  C  V  Q  V  C  Y  D  E  *  I  L  W  L  L  I  L  F   </first_frame>
            <second_frame>  S  S  I  T  S  I  T  L  L  K  K  F  L  L  *  F  K  L  Y  N  E  N  D  *  G  L  F  F  C  G  S  N  V  G  D  D  P  C  L  *  S  I  W  G  *  R  G  G  D  M  Q  R  L  A  A  E  P  V  F  G  C  D  P  G  W  D  R  T  I  T  G  L  L  C  *  A  *  E  P  A  A  L  H  L  W  I  Y  E  G  S  *  F  E  A  I  C  *  F  S  K  C  *  E  S  C  W  T  M  W  C  K  H  S  *  L  L  I  R  F  T  T  F  Y  L  L  Y  T  Y  G  S  Y  V  L  W  K  K  I  Y  I  C  K  T  L  N  K  K  W  L  *  S  V  F  K  C  V  M  M  N  E  S  C  G  F  *  F  Y  F  </second_frame>
            <third_frame>   H  P  S  L  P  L  H  Y  L  K  N  F  S  Y  N  L  N  C  I  M  K  M  T  K  V  C  S  F  V  A  V  M  L  V  M  I  L  V  C  D  Q  F  G  A  N  E  A  A  T  C  S  A  S  Q  L  S  P  C  L  G  A  I  Q  G  G  T  A  P  S  Q  D  C  C  A  R  L  K  N  Q  Q  P  C  I  C  G  F  M  K  D  P  N  L  R  Q  Y  V  N  S  P  N  A  R  K  V  A  G  Q  C  G  V  S  I  P  S  C  *  L  G  L  Q  H  F  T  C  C  I  H  M  G  L  M  Y  Y  G  K  K  Y  I  Y  V  R  L  *  I  K  N  G  C  N  L  C  S  S  V  L  *  *  M  N  L  V  A  F  D  F  I  S </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0011O23.1" strand="+"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="104325" stop="104672"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>345</number_coding_nucleotides>
                  <number_encoded_amino_acids>115</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>HPSLPLHYLKNFSYNLNCIMKMTKVCSFVAVMLVMILVCDQFGANEAATCSASQLSPCLGAIQGGTAPSQDCCARLKNQQPCICGFMKDPNLRQYVNSPNARKVAGQCGVSIPSC*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="+" PGL_start="110912" PGL_stop="112200"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="110912" e_stop="111153"/>
            <exon e_start="111234" e_stop="111964"/>
            <exon e_start="112155" e_stop="112200"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.982" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.996" e_score="0.999"/>
          <exon-only e_score="0.978"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="110912" e_stop="111153" e_length="242"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.982">
            <gDNA_intron_boundary i_start="111154" i_stop="111233" i_length="80"/>
          </intron>
          <exon e_serial="2" e_score="0.999">
            <gDNA_exon_boundary e_start="111234" e_stop="111964" e_length="731"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.996">
            <gDNA_intron_boundary i_start="111965" i_stop="112154" i_length="190"/>
          </intron>
          <exon e_serial="3" e_score="0.978">
            <gDNA_exon_boundary e_start="112155" e_stop="112200" e_length="46"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="110912" stop="111153"/>
              <exon start="111234" stop="111964"/>
              <exon start="112155" stop="112200"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U578131" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTAATTCAACTTTGTGTGTCTCATTCTTCGCCTCTTAAATAGCACTCTCTATCTAAATTTTAATTCTCATCTCTTTTAGTATTTGCATTTTAGCTACTACTCATAAGTAGTTGCCAAAAGAAAAAATTAAAGCAAAATTTATCGTGCTGCCATGGCTGTCGAGGAACTCTCGGTTGTTCTCCCCCGCGTGCTCATTGTCTCTAGACGTACCGTTCGTAAGAACAAATTTGTTGATTTTGTTG : GAGAATATCATCTCGATCTTATAGTAAGCTATGGAGCTGTTCCGGTGATTGTACCCAGAGTTTCCGGGGTACATTTGTTATTAGACAGTTTTGAACCAATTCATGGTGTTCTTCTCTGTGAAGGAGAGGATATCGATCCTTCTCTGTACAACGATGAACTATCCGATCTCTCCGTAGAAGAATTGGAAGAAATTAGGAGATTGCACGCTAGCGACACTGCAATTGACAAGGAAAAAGACACAATTGAACTCAGATTGGCTAAGCTCTGTCTAGAAAGGAACATTCCCTATTTGGGAATATGCAGGGGTTCACAGGTACTGAATGTTGCATGTGGGGGAACTCTTATACAAGACATTGGAAAAGAAATATCGAAAAACCTTCCTGAGAATCAGAGGGTAGTTCATATGGATTACGATAACTATGATGGTCATAGACATGTTATACAAGTTGTCGAGGAAACGCCATTGCACCATTGGTTCAAGGACTCGTTGGAAGACGAAAAAATGGAGATTTCAGTCAATAGTTATCATCATCAAGGAGTTAAAAAATTGGCTCAGAGATTTGTTCCTATGGCATTTGCCCCTGATGGTTTAATTGAAGGATTCTATGATCCAGATGCTTATAATCCTGTTGAGGGTAAGTTTATTATGGGACTTCAATTTCATCCGGAACGAATGAGACAAGAAGATAGTGATGAATTTGATTATCCTGGATGTACATTTGCTTATCAG : GAGTTTGTGAAGGCTGTAGTTGCATATCAGAAAAAACTGTTAAGCA</gDNA_template>
            <first_frame> L  I  Q  L  C  V  S  H  S  S  P  L  K  *  H  S  L  S  K  F  *  F  S  S  L  L  V  F  A  F  *  L  L  L  I  S  S  C  Q  K  K  K  L  K  Q  N  L  S  C  C  H  G  C  R  G  T  L  G  C  S  P  P  R  A  H  C  L  *  T  Y  R  S  *  E  Q  I  C  *  F  C  W :   R  I  S  S  R  S  Y  S  K  L  W  S  C  S  G  D  C  T  Q  S  F  R  G  T  F  V  I  R  Q  F  *  T  N  S  W  C  S  S  L  *  R  R  G  Y  R  S  F  S  V  Q  R  *  T  I  R  S  L  R  R  R  I  G  R  N  *  E  I  A  R  *  R  H  C  N  *  Q  G  K  R  H  N  *  T  Q  I  G  *  A  L  S  R  K  E  H  S  L  F  G  N  M  Q  G  F  T  G  T  E  C  C  M  W  G  N  S  Y  T  R  H  W  K  R  N  I  E  K  P  S  *  E  S  E  G  S  S  Y  G  L  R  *  L  *  W  S  *  T  C  Y  T  S  C  R  G  N  A  I  A  P  L  V  Q  G  L  V  G  R  R  K  N  G  D  F  S  Q  *  L  S  S  S  R  S  *  K  I  G  S  E  I  C  S  Y  G  I  C  P  *  W  F  N  *  R  I  L  *  S  R  C  L  *  S  C  *  G  *  V  Y  Y  G  T  S  I  S  S  G  T  N  E  T  R  R  *  *  *  I  *  L  S  W  M  Y  I  C  L  S   : G  V  C  E  G  C  S  C  I  S  E  K  T  V  K   </first_frame>
            <second_frame>  *  F  N  F  V  C  L  I  L  R  L  L  N  S  T  L  Y  L  N  F  N  S  H  L  F  *  Y  L  H  F  S  Y  Y  S  *  V  V  A  K  R  K  N  *  S  K  I  Y  R  A  A  M  A  V  E  E  L  S  V  V  L  P  R  V  L  I  V  S  R  R  T  V  R  K  N  K  F  V  D  F  V   : G  E  Y  H  L  D  L  I  V  S  Y  G  A  V  P  V  I  V  P  R  V  S  G  V  H  L  L  L  D  S  F  E  P  I  H  G  V  L  L  C  E  G  E  D  I  D  P  S  L  Y  N  D  E  L  S  D  L  S  V  E  E  L  E  E  I  R  R  L  H  A  S  D  T  A  I  D  K  E  K  D  T  I  E  L  R  L  A  K  L  C  L  E  R  N  I  P  Y  L  G  I  C  R  G  S  Q  V  L  N  V  A  C  G  G  T  L  I  Q  D  I  G  K  E  I  S  K  N  L  P  E  N  Q  R  V  V  H  M  D  Y  D  N  Y  D  G  H  R  H  V  I  Q  V  V  E  E  T  P  L  H  H  W  F  K  D  S  L  E  D  E  K  M  E  I  S  V  N  S  Y  H  H  Q  G  V  K  K  L  A  Q  R  F  V  P  M  A  F  A  P  D  G  L  I  E  G  F  Y  D  P  D  A  Y  N  P  V  E  G  K  F  I  M  G  L  Q  F  H  P  E  R  M  R  Q  E  D  S  D  E  F  D  Y  P  G  C  T  F  A  Y  Q  :  E  F  V  K  A  V  V  A  Y  Q  K  K  L  L  S  </second_frame>
            <third_frame>   N  S  T  L  C  V  S  F  F  A  S  *  I  A  L  S  I  *  I  L  I  L  I  S  F  S  I  C  I  L  A  T  T  H  K  *  L  P  K  E  K  I  K  A  K  F  I  V  L  P  W  L  S  R  N  S  R  L  F  S  P  A  C  S  L  S  L  D  V  P  F  V  R  T  N  L  L  I  L  L  :  E  N  I  I  S  I  L  *  *  A  M  E  L  F  R  *  L  Y  P  E  F  P  G  Y  I  C  Y  *  T  V  L  N  Q  F  M  V  F  F  S  V  K  E  R  I  S  I  L  L  C  T  T  M  N  Y  P  I  S  P  *  K  N  W  K  K  L  G  D  C  T  L  A  T  L  Q  L  T  R  K  K  T  Q  L  N  S  D  W  L  S  S  V  *  K  G  T  F  P  I  W  E  Y  A  G  V  H  R  Y  *  M  L  H  V  G  E  L  L  Y  K  T  L  E  K  K  Y  R  K  T  F  L  R  I  R  G  *  F  I  W  I  T  I  T  M  M  V  I  D  M  L  Y  K  L  S  R  K  R  H  C  T  I  G  S  R  T  R  W  K  T  K  K  W  R  F  Q  S  I  V  I  I  I  K  E  L  K  N  W  L  R  D  L  F  L  W  H  L  P  L  M  V  *  L  K  D  S  M  I  Q  M  L  I  I  L  L  R  V  S  L  L  W  D  F  N  F  I  R  N  E  *  D  K  K  I  V  M  N  L  I  I  L  D  V  H  L  L  I  R :   S  L  *  R  L  *  L  H  I  R  K  N  C  *  A </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0011O23.1" strand="+"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="111042" stop="111153"/>
                    <exon start="111234" stop="111964"/>
                    <exon start="112155" stop="112199"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>888</number_coding_nucleotides>
                  <number_encoded_amino_acids>296</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SKIYRAAMAVEELSVVLPRVLIVSRRTVRKNKFVDFVGEYHLDLIVSYGAVPVIVPRVSGVHLLLDSFEPIHGVLLCEGEDIDPSLYNDELSDLSVEELEEIRRLHASDTAIDKEKDTIELRLAKLCLERNIPYLGICRGSQVLNVACGGTLIQDIGKEISKNLPENQRVVHMDYDNYDGHRHVIQVVEETPLHHWFKDSLEDEKMEISVNSYHHQGVKKLAQRFVPMAFAPDGLIEGFYDPDAYNPVEGKFIMGLQFHPERMRQEDSDEFDYPGCTFAYQEFVKAVVAYQKKLLS</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="+" PGL_start="118597" PGL_stop="119399"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="118597" e_stop="119399"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.970"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.970">
            <gDNA_exon_boundary e_start="118597" e_stop="119399" e_length="803"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="118597" stop="119399"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U565293" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TATCATCTTCTTCATGCTTTATTTCCACCTACTTTTCTGCTCACCTTACACTTGTTTAACAATCCATTGCCTCTTCGTTTAGCCACATTCATTTCCCAATTTTTTCCAAATGAATTCTCAAAGCTTTTACTTCTTCTCTCTGTTCACTCTGTTTTCATCACTTGTACTAATTCATGTACCTCGAGGTTCGAGTGACCCTGATGAATTTTACCAGACTTGTGGGAAAACATATACATGTGGCAATATTAAGGGATTAAGTTATCCTTTTATGAGTGTCAATGATCCTTTCTTCTGCGGCTATCCTGGTTTTGAGCTCAATTGCAATAAGGATGGTAGTACTACAATGGAAATCGAAAACATCAAGTATCGAGTTTTAAACGTACTTCCAACAACCCAAACGATAAGAATTCTGAGGGAGGATATCATGAAATCCACTTGTCCTGTTGATTTGGTTAACACCACTCTGGATTACTCCCTCTTCGATTATGCCTCTGGCTATACAAACTTGACCTTTCTATACGATTGCCCTGTTGCATCCCACTTTGCAGAAATGGATGGTACTTTCACTTGTAGAAATAGCAAATATCACAATGTTTTCGTACTACCTGGTGCTGTAGGCCCGGGGAAGTGCGATGCTAGTGTCACAGTTCCAGTGCCTCAAATGAGTGCTGGTAATGTAGGGTCATTGGATACATCAGGTCTGGCACAAGTACTACAAGAGGGGTTTGATATAAGATGGAAACTTGAAAGTAAAACCTGCAGTAAATGTATCCAAGACAAGGGAAGATGTGGATATGATGAAT</gDNA_template>
            <first_frame> Y  H  L  L  H  A  L  F  P  P  T  F  L  L  T  L  H  L  F  N  N  P  L  P  L  R  L  A  T  F  I  S  Q  F  F  P  N  E  F  S  K  L  L  L  L  L  S  V  H  S  V  F  I  T  C  T  N  S  C  T  S  R  F  E  *  P  *  *  I  L  P  D  L  W  E  N  I  Y  M  W  Q  Y  *  G  I  K  L  S  F  Y  E  C  Q  *  S  F  L  L  R  L  S  W  F  *  A  Q  L  Q  *  G  W  *  Y  Y  N  G  N  R  K  H  Q  V  S  S  F  K  R  T  S  N  N  P  N  D  K  N  S  E  G  G  Y  H  E  I  H  L  S  C  *  F  G  *  H  H  S  G  L  L  P  L  R  L  C  L  W  L  Y  K  L  D  L  S  I  R  L  P  C  C  I  P  L  C  R  N  G  W  Y  F  H  L  *  K  *  Q  I  S  Q  C  F  R  T  T  W  C  C  R  P  G  E  V  R  C  *  C  H  S  S  S  A  S  N  E  C  W  *  C  R  V  I  G  Y  I  R  S  G  T  S  T  T  R  G  V  *  Y  K  M  E  T  *  K  *  N  L  Q  *  M  Y  P  R  Q  G  K  M  W  I  *  *   </first_frame>
            <second_frame>  I  I  F  F  M  L  Y  F  H  L  L  F  C  S  P  Y  T  C  L  T  I  H  C  L  F  V  *  P  H  S  F  P  N  F  F  Q  M  N  S  Q  S  F  Y  F  F  S  L  F  T  L  F  S  S  L  V  L  I  H  V  P  R  G  S  S  D  P  D  E  F  Y  Q  T  C  G  K  T  Y  T  C  G  N  I  K  G  L  S  Y  P  F  M  S  V  N  D  P  F  F  C  G  Y  P  G  F  E  L  N  C  N  K  D  G  S  T  T  M  E  I  E  N  I  K  Y  R  V  L  N  V  L  P  T  T  Q  T  I  R  I  L  R  E  D  I  M  K  S  T  C  P  V  D  L  V  N  T  T  L  D  Y  S  L  F  D  Y  A  S  G  Y  T  N  L  T  F  L  Y  D  C  P  V  A  S  H  F  A  E  M  D  G  T  F  T  C  R  N  S  K  Y  H  N  V  F  V  L  P  G  A  V  G  P  G  K  C  D  A  S  V  T  V  P  V  P  Q  M  S  A  G  N  V  G  S  L  D  T  S  G  L  A  Q  V  L  Q  E  G  F  D  I  R  W  K  L  E  S  K  T  C  S  K  C  I  Q  D  K  G  R  C  G  Y  D  E  </second_frame>
            <third_frame>   S  S  S  S  C  F  I  S  T  Y  F  S  A  H  L  T  L  V  *  Q  S  I  A  S  S  F  S  H  I  H  F  P  I  F  S  K  *  I  L  K  A  F  T  S  S  L  C  S  L  C  F  H  H  L  Y  *  F  M  Y  L  E  V  R  V  T  L  M  N  F  T  R  L  V  G  K  H  I  H  V  A  I  L  R  D  *  V  I  L  L  *  V  S  M  I  L  S  S  A  A  I  L  V  L  S  S  I  A  I  R  M  V  V  L  Q  W  K  S  K  T  S  S  I  E  F  *  T  Y  F  Q  Q  P  K  R  *  E  F  *  G  R  I  S  *  N  P  L  V  L  L  I  W  L  T  P  L  W  I  T  P  S  S  I  M  P  L  A  I  Q  T  *  P  F  Y  T  I  A  L  L  H  P  T  L  Q  K  W  M  V  L  S  L  V  E  I  A  N  I  T  M  F  S  Y  Y  L  V  L  *  A  R  G  S  A  M  L  V  S  Q  F  Q  C  L  K  *  V  L  V  M  *  G  H  W  I  H  Q  V  W  H  K  Y  Y  K  R  G  L  I  *  D  G  N  L  K  V  K  P  A  V  N  V  S  K  T  R  E  D  V  D  M  M  N </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0011O23.1" strand="+"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="118679" stop="119398"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>720</number_coding_nucleotides>
                  <number_encoded_amino_acids>240</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PHSFPNFFQMNSQSFYFFSLFTLFSSLVLIHVPRGSSDPDEFYQTCGKTYTCGNIKGLSYPFMSVNDPFFCGYPGFELNCNKDGSTTMEIENIKYRVLNVLPTTQTIRILREDIMKSTCPVDLVNTTLDYSLFDYASGYTNLTFLYDCPVASHFAEMDGTFTCRNSKYHNVFVLPGAVGPGKCDASVTVPVPQMSAGNVGSLDTSGLAQVLQEGFDIRWKLESKTCSKCIQDKGRCGYDE</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="15" PGL_strand="+" PGL_start="121732" PGL_stop="122526"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="121732" e_stop="122526"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.961"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.961">
            <gDNA_exon_boundary e_start="121732" e_stop="122526" e_length="795"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="121732" stop="122526"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U582667" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CCTTTCTCTGTCCCTTAAATCCTCATCTCCTTTCAGCTTAGCTCCTGAATAAAGGTCTTTTACCACGATTACCAGTTAGCGCCTCTCTTTCTTAGGTGGTGCTAATTCCCTTAATCAAACAGAAATGCATCCTTATTTTTTGCTCTTCACTTCCACAATATTTATCTTGATCTATATACCGGGGTCTTTCTGTCAAGATGACGAACAATACAGGAGTTGTGGTGAGCCGTTTCGCTGCGGCAGCATGGATATAGTTTACCCTTTTTGGGGAGGGAGAAAACCAGAGTATTGTGGTCATCCAAGTTTTGAGATCAAGTGCGAAAATAACATCCCCAAAATTACTATTGAATCAACAGGATACGAAGTGATAGGTATCAACACCCCTAATAGAATTGTAACCCTGGCTCGCGATGATTTACTGAGTAATATTTGTTTGGATAATCCTGAGAATGCCTCCTTTGATTTAAACACTTTCAGCTATCTTTCGAGTGACCTGAATATTACTCTTTATTTCGGCTGCACCCTCCGCCCTGGTTCGCAATTACCAGCTTCGTCTCCAAATAGATTCAATTGCAATAGCAATATATTTGGTATATATACGCTGATCAACGTTCCCTTCGACCTTAGTCTGGTAACATGCCAGGAAGAAATAATAGTTAGGGTCAATCAAACGAATGCTGTGGCATTAGCCAGTCCTACAGCTTCCGTGGAAGTTCTGAAAAGAGCCATTGCTGGCGGGTTTTCAGTAAACTGGACGGCAACTATTGATTCAAAGTGCAACCAATGCGATAGGTC</gDNA_template>
            <first_frame> P  F  S  V  P  *  I  L  I  S  F  Q  L  S  S  *  I  K  V  F  Y  H  D  Y  Q  L  A  P  L  F  L  R  W  C  *  F  P  *  S  N  R  N  A  S  L  F  F  A  L  H  F  H  N  I  Y  L  D  L  Y  T  G  V  F  L  S  R  *  R  T  I  Q  E  L  W  *  A  V  S  L  R  Q  H  G  Y  S  L  P  F  L  G  R  E  K  T  R  V  L  W  S  S  K  F  *  D  Q  V  R  K  *  H  P  Q  N  Y  Y  *  I  N  R  I  R  S  D  R  Y  Q  H  P  *  *  N  C  N  P  G  S  R  *  F  T  E  *  Y  L  F  G  *  S  *  E  C  L  L  *  F  K  H  F  Q  L  S  F  E  *  P  E  Y  Y  S  L  F  R  L  H  P  P  P  W  F  A  I  T  S  F  V  S  K  *  I  Q  L  Q  *  Q  Y  I  W  Y  I  Y  A  D  Q  R  S  L  R  P  *  S  G  N  M  P  G  R  N  N  S  *  G  Q  S  N  E  C  C  G  I  S  Q  S  Y  S  F  R  G  S  S  E  K  S  H  C  W  R  V  F  S  K  L  D  G  N  Y  *  F  K  V  Q  P  M  R  *  V </first_frame>
            <second_frame>  L  S  L  S  L  K  S  S  S  P  F  S  L  A  P  E  *  R  S  F  T  T  I  T  S  *  R  L  S  F  L  G  G  A  N  S  L  N  Q  T  E  M  H  P  Y  F  L  L  F  T  S  T  I  F  I  L  I  Y  I  P  G  S  F  C  Q  D  D  E  Q  Y  R  S  C  G  E  P  F  R  C  G  S  M  D  I  V  Y  P  F  W  G  G  R  K  P  E  Y  C  G  H  P  S  F  E  I  K  C  E  N  N  I  P  K  I  T  I  E  S  T  G  Y  E  V  I  G  I  N  T  P  N  R  I  V  T  L  A  R  D  D  L  L  S  N  I  C  L  D  N  P  E  N  A  S  F  D  L  N  T  F  S  Y  L  S  S  D  L  N  I  T  L  Y  F  G  C  T  L  R  P  G  S  Q  L  P  A  S  S  P  N  R  F  N  C  N  S  N  I  F  G  I  Y  T  L  I  N  V  P  F  D  L  S  L  V  T  C  Q  E  E  I  I  V  R  V  N  Q  T  N  A  V  A  L  A  S  P  T  A  S  V  E  V  L  K  R  A  I  A  G  G  F  S  V  N  W  T  A  T  I  D  S  K  C  N  Q  C  D  R   </second_frame>
            <third_frame>   F  L  C  P  L  N  P  H  L  L  S  A  *  L  L  N  K  G  L  L  P  R  L  P  V  S  A  S  L  S  *  V  V  L  I  P  L  I  K  Q  K  C  I  L  I  F  C  S  S  L  P  Q  Y  L  S  *  S  I  Y  R  G  L  S  V  K  M  T  N  N  T  G  V  V  V  S  R  F  A  A  A  A  W  I  *  F  T  L  F  G  E  G  E  N  Q  S  I  V  V  I  Q  V  L  R  S  S  A  K  I  T  S  P  K  L  L  L  N  Q  Q  D  T  K  *  *  V  S  T  P  L  I  E  L  *  P  W  L  A  M  I  Y  *  V  I  F  V  W  I  I  L  R  M  P  P  L  I  *  T  L  S  A  I  F  R  V  T  *  I  L  L  F  I  S  A  A  P  S  A  L  V  R  N  Y  Q  L  R  L  Q  I  D  S  I  A  I  A  I  Y  L  V  Y  I  R  *  S  T  F  P  S  T  L  V  W  *  H  A  R  K  K  *  *  L  G  S  I  K  R  M  L  W  H  *  P  V  L  Q  L  P  W  K  F  *  K  E  P  L  L  A  G  F  Q  *  T  G  R  Q  L  L  I  Q  S  A  T  N  A  I  G  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0011O23.1" strand="+"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="121811" stop="122524"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>714</number_coding_nucleotides>
                  <number_encoded_amino_acids>238</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RLSFLGGANSLNQTEMHPYFLLFTSTIFILIYIPGSFCQDDEQYRSCGEPFRCGSMDIVYPFWGGRKPEYCGHPSFEIKCENNIPKITIESTGYEVIGINTPNRIVTLARDDLLSNICLDNPENASFDLNTFSYLSSDLNITLYFGCTLRPGSQLPASSPNRFNCNSNIFGIYTLINVPFDLSLVTCQEEIIVRVNQTNAVALASPTASVEVLKRAIAGGFSVNWTATIDSKCNQCDR</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="16" PGL_strand="-" PGL_start="123054" PGL_stop="122270"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="123054" e_stop="122270"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.994"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.994">
            <gDNA_exon_boundary e_start="123054" e_stop="122270" e_length="785"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="123054" stop="122270"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U582668" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="16" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GGAACTGGTAGATAGAGGGCTAGAGGCTGTAGTATATTGAGTTTCCTATGGAATTTGGACAAAATTATAACACGTACAAAATTTTATGGAGAGTTTAATACTAGATAAGCAATGCAAAACAAGTACTTCCGTTGGTCCATACTATACTGTGTTTTCTAGTTAGTCCAAAAATAAATATTTTTTCAAGATGATGGAGAAGGTATTAATTGGGGTTTTTTTCCCTTCAAAGTTATTCTGATTTTTTCATACAAGCAAGAAAATTCATATTAAATTGATACTTTACTGATTGTGAAAGAGTCTTTACTAAGTTAGCGTTTGTAATTCAAATCTCTTGAGAAAGGACTGGTATGTATGGATGGGACATGTAATTATCTGGAAACGGAGGAACGAAGTAAATTATGAGTAATAATAGAGAAAAGATTACCGCCGGCTTGGTTTGGTCCGTCGTTGCAGTCGTTTGGATGAGTACCATTTTCACAATGGCAAGCAAAGTCTCCAGAATCTGGATTGGATCCACATCTTCCACCTGACCTATCGCATTGGTTGCACTTTGAATCAATAGTTGCCGTCCAGTTTACTGAAAACCCGCCAGCAATGGCTCTTTTCAGAACTTCCACGGAAGCTGTAGGACTGGCTAATGCCACAGCATTCGTTTGATTGACCCTAACTATTATTTCTTCCTGGCATGTTACCAGACTAAGGTCGAAGGGAACGTTGATCAGCGTATATATACCAAATATATTGCTATTGCAATTGAATCTATTTGGAGACGAAGCTGGTAATTG</gDNA_template>
            <first_frame> G  T  G  R  *  R  A  R  G  C  S  I  L  S  F  L  W  N  L  D  K  I  I  T  R  T  K  F  Y  G  E  F  N  T  R  *  A  M  Q  N  K  Y  F  R  W  S  I  L  Y  C  V  F  *  L  V  Q  K  *  I  F  F  Q  D  D  G  E  G  I  N  W  G  F  F  P  F  K  V  I  L  I  F  S  Y  K  Q  E  N  S  Y  *  I  D  T  L  L  I  V  K  E  S  L  L  S  *  R  L  *  F  K  S  L  E  K  G  L  V  C  M  D  G  T  C  N  Y  L  E  T  E  E  R  S  K  L  *  V  I  I  E  K  R  L  P  P  A  W  F  G  P  S  L  Q  S  F  G  *  V  P  F  S  Q  W  Q  A  K  S  P  E  S  G  L  D  P  H  L  P  P  D  L  S  H  W  L  H  F  E  S  I  V  A  V  Q  F  T  E  N  P  P  A  M  A  L  F  R  T  S  T  E  A  V  G  L  A  N  A  T  A  F  V  *  L  T  L  T  I  I  S  S  W  H  V  T  R  L  R  S  K  G  T  L  I  S  V  Y  I  P  N  I  L  L  L  Q  L  N  L  F  G  D  E  A  G  N   </first_frame>
            <second_frame>  E  L  V  D  R  G  L  E  A  V  V  Y  *  V  S  Y  G  I  W  T  K  L  *  H  V  Q  N  F  M  E  S  L  I  L  D  K  Q  C  K  T  S  T  S  V  G  P  Y  Y  T  V  F  S  S  *  S  K  N  K  Y  F  F  K  M  M  E  K  V  L  I  G  V  F  F  P  S  K  L  F  *  F  F  H  T  S  K  K  I  H  I  K  L  I  L  Y  *  L  *  K  S  L  Y  *  V  S  V  C  N  S  N  L  L  R  K  D  W  Y  V  W  M  G  H  V  I  I  W  K  R  R  N  E  V  N  Y  E  *  *  *  R  K  D  Y  R  R  L  G  L  V  R  R  C  S  R  L  D  E  Y  H  F  H  N  G  K  Q  S  L  Q  N  L  D  W  I  H  I  F  H  L  T  Y  R  I  G  C  T  L  N  Q  *  L  P  S  S  L  L  K  T  R  Q  Q  W  L  F  S  E  L  P  R  K  L  *  D  W  L  M  P  Q  H  S  F  D  *  P  *  L  L  F  L  P  G  M  L  P  D  *  G  R  R  E  R  *  S  A  Y  I  Y  Q  I  Y  C  Y  C  N  *  I  Y  L  E  T  K  L  V  I  </second_frame>
            <third_frame>   N  W  *  I  E  G  *  R  L  *  Y  I  E  F  P  M  E  F  G  Q  N  Y  N  T  Y  K  I  L  W  R  V  *  Y  *  I  S  N  A  K  Q  V  L  P  L  V  H  T  I  L  C  F  L  V  S  P  K  I  N  I  F  S  R  *  W  R  R  Y  *  L  G  F  F  S  L  Q  S  Y  S  D  F  F  I  Q  A  R  K  F  I  L  N  *  Y  F  T  D  C  E  R  V  F  T  K  L  A  F  V  I  Q  I  S  *  E  R  T  G  M  Y  G  W  D  M  *  L  S  G  N  G  G  T  K  *  I  M  S  N  N  R  E  K  I  T  A  G  L  V  W  S  V  V  A  V  V  W  M  S  T  I  F  T  M  A  S  K  V  S  R  I  W  I  G  S  T  S  S  T  *  P  I  A  L  V  A  L  *  I  N  S  C  R  P  V  Y  *  K  P  A  S  N  G  S  F  Q  N  F  H  G  S  C  R  T  G  *  C  H  S  I  R  L  I  D  P  N  Y  Y  F  F  L  A  C  Y  Q  T  K  V  E  G  N  V  D  Q  R  I  Y  T  K  Y  I  A  I  A  I  E  S  I  W  R  R  S  W  *  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0011O23.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="17" PGL_strand="+" PGL_start="124968" PGL_stop="125644"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="124968" e_stop="125644"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.987"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.987">
            <gDNA_exon_boundary e_start="124968" e_stop="125644" e_length="677"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="124968" stop="125644"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U603747" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="17" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ACCATCACAATTACTCTCTTGTTCGCCACCTTTATTCTCACGACAACCTTCTCCTTCTCTGATGACAACGTCTTATACCCCAATTGTCATCTCACTTACTCTTGTGGTTCTATCCGTAACATCACCTACCCATTTACCGGCGTCGATCGCCCTGACTACTGTGGCCTCCCGGATTTCAAACTCCGATGTGTTGACGATAAACACACCGAGTTCACTCACCAATCACTTACCTACCGTGTTCTTTCTATTAATCAGTCATCAGCGACCATGACTGTATCGAGAATCGACCTCTGGAAAAATTCCTGCCCTTCGCAATTCATCAACACCACTTTTAATTCTACCGTTTTCAGTGTCGACCGTAACGAAGACGATGAACTTTCGTTGAGCTACGGCTGCGATGTATCTGCATTGGTTATCACGCCTCAGAATTTGTTCAACTGTAGTGTAGATGGTTTGAATTCCACCGGCGCATTTTACTTACTAGGTCCAATTCCAAGTGACCCTTTTCTGAATGTCATAACTTGTACAACTATGGTCACTGTTCCGATGTTTACAACAGTGGGTAAAATGCTATATAGCAATGAGATTGCTCTTGGGGAGGCATTGATGCAGGGGTTCAGTGTGAAATATGATACCCCTTATGATAGGCGCTGTTCTGAGTGCAAGAGTCTGGGTGG</gDNA_template>
            <first_frame> T  I  T  I  T  L  L  F  A  T  F  I  L  T  T  T  F  S  F  S  D  D  N  V  L  Y  P  N  C  H  L  T  Y  S  C  G  S  I  R  N  I  T  Y  P  F  T  G  V  D  R  P  D  Y  C  G  L  P  D  F  K  L  R  C  V  D  D  K  H  T  E  F  T  H  Q  S  L  T  Y  R  V  L  S  I  N  Q  S  S  A  T  M  T  V  S  R  I  D  L  W  K  N  S  C  P  S  Q  F  I  N  T  T  F  N  S  T  V  F  S  V  D  R  N  E  D  D  E  L  S  L  S  Y  G  C  D  V  S  A  L  V  I  T  P  Q  N  L  F  N  C  S  V  D  G  L  N  S  T  G  A  F  Y  L  L  G  P  I  P  S  D  P  F  L  N  V  I  T  C  T  T  M  V  T  V  P  M  F  T  T  V  G  K  M  L  Y  S  N  E  I  A  L  G  E  A  L  M  Q  G  F  S  V  K  Y  D  T  P  Y  D  R  R  C  S  E  C  K  S  L  G   </first_frame>
            <second_frame>  P  S  Q  L  L  S  C  S  P  P  L  F  S  R  Q  P  S  P  S  L  M  T  T  S  Y  T  P  I  V  I  S  L  T  L  V  V  L  S  V  T  S  P  T  H  L  P  A  S  I  A  L  T  T  V  A  S  R  I  S  N  S  D  V  L  T  I  N  T  P  S  S  L  T  N  H  L  P  T  V  F  F  L  L  I  S  H  Q  R  P  *  L  Y  R  E  S  T  S  G  K  I  P  A  L  R  N  S  S  T  P  L  L  I  L  P  F  S  V  S  T  V  T  K  T  M  N  F  R  *  A  T  A  A  M  Y  L  H  W  L  S  R  L  R  I  C  S  T  V  V  *  M  V  *  I  P  P  A  H  F  T  Y  *  V  Q  F  Q  V  T  L  F  *  M  S  *  L  V  Q  L  W  S  L  F  R  C  L  Q  Q  W  V  K  C  Y  I  A  M  R  L  L  L  G  R  H  *  C  R  G  S  V  *  N  M  I  P  L  M  I  G  A  V  L  S  A  R  V  W  V  </second_frame>
            <third_frame>   H  H  N  Y  S  L  V  R  H  L  Y  S  H  D  N  L  L  L  L  *  *  Q  R  L  I  P  Q  L  S  S  H  L  L  L  W  F  Y  P  *  H  H  L  P  I  Y  R  R  R  S  P  *  L  L  W  P  P  G  F  Q  T  P  M  C  *  R  *  T  H  R  V  H  S  P  I  T  Y  L  P  C  S  F  Y  *  S  V  I  S  D  H  D  C  I  E  N  R  P  L  E  K  F  L  P  F  A  I  H  Q  H  H  F  *  F  Y  R  F  Q  C  R  P  *  R  R  R  *  T  F  V  E  L  R  L  R  C  I  C  I  G  Y  H  A  S  E  F  V  Q  L  *  C  R  W  F  E  F  H  R  R  I  L  L  T  R  S  N  S  K  *  P  F  S  E  C  H  N  L  Y  N  Y  G  H  C  S  D  V  Y  N  S  G  *  N  A  I  *  Q  *  D  C  S  W  G  G  I  D  A  G  V  Q  C  E  I  *  Y  P  L  *  *  A  L  F  *  V  Q  E  S  G  W </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0011O23.1" strand="+"/>
                <serials PGL_serial="17" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="124968" stop="125642"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>675</number_coding_nucleotides>
                  <number_encoded_amino_acids>225</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TITITLLFATFILTTTFSFSDDNVLYPNCHLTYSCGSIRNITYPFTGVDRPDYCGLPDFKLRCVDDKHTEFTHQSLTYRVLSINQSSATMTVSRIDLWKNSCPSQFINTTFNSTVFSVDRNEDDELSLSYGCDVSALVITPQNLFNCSVDGLNSTGAFYLLGPIPSDPFLNVITCTTMVTVPMFTTVGKMLYSNEIALGEALMQGFSVKYDTPYDRRCSECKSLG</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="18" PGL_strand="-" PGL_start="128142" PGL_stop="127011"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="128142" e_stop="127011"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.981"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.981">
            <gDNA_exon_boundary e_start="128142" e_stop="127011" e_length="1132"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="128142" stop="127011"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U569715" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="18" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GGTATACAAAAGAGCAGAGATGCATATGTATACTAGAATGTTGGCAGCCCTATTCACTATTTTTATACATTGCCTTATGCGAAAAGCAGTTTTAGATAATCTCCCACAGAAAATATTGACGATAGCAACATAACTATATGTAAGCAAAAATAAGAAATAAATTATCTATGGAAGACGCGAGATACTGATCACAAGTGCCATAATAGTAGTTGCTTCCTCACCTTGCATCGAATTCAACCGACCTGAAAAACATATTTCATCCACTAGAATGTGGTGTGGAGCTGTCAACTCATTTGTCAGCGGCAACTGAATCCGGAGAAGAAAGGGAGTCCTTTAGGAGCCCAGCATCATCTACCACAATATCCAGTACCTCAGCATTGTGTGCTTTCGACTCTCCATTCTGGATGCCTCTCAATGTCTCCAGCACTTCTTGCATTGAAGGTCTCAGATCTCTCTCTTGTTGCAGACATCGGAAAGCTAACTCTGCGACTAATGTAGTCATCCTCCTCACGGAGCTGTTTGTTGAGAATCCAAGAGTTGGATCAACTAATTCATGAATTGAATGACCTTGGATCTTGTTGACAGCCATATTAGACAAATTAATATCATGGCGGTGCCTGTTGGTATCCACAGCTTCTAATGATGAGATCAGCTCTACCAACACCACCCCAAAACTATAGACATCACTCTTTTCAGTGAGCTGGTAACATTGGTAGTATTCAGGATCAACGTAGCCTGGTGTACCCTGTGGAGCAGTAGAGACATGTGTGACATTATTTGGGAACAGTCTTGATAGCCCAAAATCAGCAACTTTCACATGGAAATCGTTGTCTAACAGAATGTTGTTGGTTTTGACGTCACGGTGTATTATAATTGAGGAGTGGAGATAAGCCAGGGCTTCAGCAGTCTCAATGGCTATGTTCATTCGGACAGGCCAAGAGAGTAAGCCAGATTTGGCCCGTTTACCATGTAGATGATCTGCCACTGTCCCATTTGGTATATACTCATAAACTAGGAGTAAATCTCGGCTTCGTTTAGATGTACACCCATACAACGTCACTAGGTTCTTGTGGCGTAGCTGAGTTAAAATCTCTACTTCATTCATGAACTGCTCCACACGCTTGAAATTGTT</gDNA_template>
            <first_frame> G  I  Q  K  S  R  D  A  Y  V  Y  *  N  V  G  S  P  I  H  Y  F  Y  T  L  P  Y  A  K  S  S  F  R  *  S  P  T  E  N  I  D  D  S  N  I  T  I  C  K  Q  K  *  E  I  N  Y  L  W  K  T  R  D  T  D  H  K  C  H  N  S  S  C  F  L  T  L  H  R  I  Q  P  T  *  K  T  Y  F  I  H  *  N  V  V  W  S  C  Q  L  I  C  Q  R  Q  L  N  P  E  K  K  G  S  P  L  G  A  Q  H  H  L  P  Q  Y  P  V  P  Q  H  C  V  L  S  T  L  H  S  G  C  L  S  M  S  P  A  L  L  A  L  K  V  S  D  L  S  L  V  A  D  I  G  K  L  T  L  R  L  M  *  S  S  S  S  R  S  C  L  L  R  I  Q  E  L  D  Q  L  I  H  E  L  N  D  L  G  S  C  *  Q  P  Y  *  T  N  *  Y  H  G  G  A  C  W  Y  P  Q  L  L  M  M  R  S  A  L  P  T  P  P  Q  N  Y  R  H  H  S  F  Q  *  A  G  N  I  G  S  I  Q  D  Q  R  S  L  V  Y  P  V  E  Q  *  R  H  V  *  H  Y  L  G  T  V  L  I  A  Q  N  Q  Q  L  S  H  G  N  R  C  L  T  E  C  C  W  F  *  R  H  G  V  L  *  L  R  S  G  D  K  P  G  L  Q  Q  S  Q  W  L  C  S  F  G  Q  A  K  R  V  S  Q  I  W  P  V  Y  H  V  D  D  L  P  L  S  H  L  V  Y  T  H  K  L  G  V  N  L  G  F  V  *  M  Y  T  H  T  T  S  L  G  S  C  G  V  A  E  L  K  S  L  L  H  S  *  T  A  P  H  A  *  N  C  </first_frame>
            <second_frame>  V  Y  K  R  A  E  M  H  M  Y  T  R  M  L  A  A  L  F  T  I  F  I  H  C  L  M  R  K  A  V  L  D  N  L  P  Q  K  I  L  T  I  A  T  *  L  Y  V  S  K  N  K  K  *  I  I  Y  G  R  R  E  I  L  I  T  S  A  I  I  V  V  A  S  S  P  C  I  E  F  N  R  P  E  K  H  I  S  S  T  R  M  W  C  G  A  V  N  S  F  V  S  G  N  *  I  R  R  R  K  G  V  L  *  E  P  S  I  I  Y  H  N  I  Q  Y  L  S  I  V  C  F  R  L  S  I  L  D  A  S  Q  C  L  Q  H  F  L  H  *  R  S  Q  I  S  L  L  L  Q  T  S  E  S  *  L  C  D  *  C  S  H  P  P  H  G  A  V  C  *  E  S  K  S  W  I  N  *  F  M  N  *  M  T  L  D  L  V  D  S  H  I  R  Q  I  N  I  M  A  V  P  V  G  I  H  S  F  *  *  *  D  Q  L  Y  Q  H  H  P  K  T  I  D  I  T  L  F  S  E  L  V  T  L  V  V  F  R  I  N  V  A  W  C  T  L  W  S  S  R  D  M  C  D  I  I  W  E  Q  S  *  *  P  K  I  S  N  F  H  M  E  I  V  V  *  Q  N  V  V  G  F  D  V  T  V  Y  Y  N  *  G  V  E  I  S  Q  G  F  S  S  L  N  G  Y  V  H  S  D  R  P  R  E  *  A  R  F  G  P  F  T  M  *  M  I  C  H  C  P  I  W  Y  I  L  I  N  *  E  *  I  S  A  S  F  R  C  T  P  I  Q  R  H  *  V  L  V  A  *  L  S  *  N  L  Y  F  I  H  E  L  L  H  T  L  E  I  V </second_frame>
            <third_frame>   Y  T  K  E  Q  R  C  I  C  I  L  E  C  W  Q  P  Y  S  L  F  L  Y  I  A  L  C  E  K  Q  F  *  I  I  S  H  R  K  Y  *  R  *  Q  H  N  Y  M  *  A  K  I  R  N  K  L  S  M  E  D  A  R  Y  *  S  Q  V  P  *  *  *  L  L  P  H  L  A  S  N  S  T  D  L  K  N  I  F  H  P  L  E  C  G  V  E  L  S  T  H  L  S  A  A  T  E  S  G  E  E  R  E  S  F  R  S  P  A  S  S  T  T  I  S  S  T  S  A  L  C  A  F  D  S  P  F  W  M  P  L  N  V  S  S  T  S  C  I  E  G  L  R  S  L  S  C  C  R  H  R  K  A  N  S  A  T  N  V  V  I  L  L  T  E  L  F  V  E  N  P  R  V  G  S  T  N  S  *  I  E  *  P  W  I  L  L  T  A  I  L  D  K  L  I  S  W  R  C  L  L  V  S  T  A  S  N  D  E  I  S  S  T  N  T  T  P  K  L  *  T  S  L  F  S  V  S  W  *  H  W  *  Y  S  G  S  T  *  P  G  V  P  C  G  A  V  E  T  C  V  T  L  F  G  N  S  L  D  S  P  K  S  A  T  F  T  W  K  S  L  S  N  R  M  L  L  V  L  T  S  R  C  I  I  I  E  E  W  R  *  A  R  A  S  A  V  S  M  A  M  F  I  R  T  G  Q  E  S  K  P  D  L  A  R  L  P  C  R  *  S  A  T  V  P  F  G  I  Y  S  *  T  R  S  K  S  R  L  R  L  D  V  H  P  Y  N  V  T  R  F  L  W  R  S  *  V  K  I  S  T  S  F  M  N  C  S  T  R  L  K  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0011O23.1" strand="-"/>
                <serials PGL_serial="18" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="127933" stop="127586"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>345</number_coding_nucleotides>
                  <number_encoded_amino_acids>115</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LLPHLASNSTDLKNIFHPLECGVELSTHLSAATESGEERESFRSPASSTTISSTSALCAFDSPFWMPLNVSSTSCIEGLRSLSCCRHRKANSATNVVILLTELFVENPRVGSTNS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="19" PGL_strand="+" PGL_start="131125" PGL_stop="131965"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="131125" e_stop="131965"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.994"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.994">
            <gDNA_exon_boundary e_start="131125" e_stop="131965" e_length="841"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="131125" stop="131965"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U577115" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="19" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ACAGACGGTCCATATTATTCGGCCGTACTAAATCCTTCCCAATTCCCCCCATCTTCACTACCATTTTTGCTAACCAAAAAAACAATAGTTAAAATTTGTCGAAATACGTACCTCAGATCGCAACGAAAATGGCTACTTTGCAGAAATTCAAGCTTCTCGCAACTCAATGTGCAGTAGCAGGAAGTCCAACCCGGAGTCCAACAACAAGCCCAGTTATTCACCTCCGCCGACGGAAGACTCTCCGTATGCTCCTCAGTCGTAGCATCGGCGGCGGAAGTGGCCGTAGGCTGCCTCGACGGGAAGTCTGTTCGCCGGATCGGTTTGTTGGAGATCGCGATTCGACGGAGAAGGGGAAGGAACTGGTGGTCAGTCATAAGCTGAAGGACTTGTTTGTTTCGTCGCCTCCGTCGTTTGCTGAAAATACGAGACAAGGACTCTCGCCGGCAGCCTCTGGTGCCGGCGGCGGGTTTAGTTCAGGATCAGCTGTTCGGCGAATAGGCTTACGCTCGCTTCGGCCGTTATCAGCGACATTCCGGCAACGGCTACTGCGGAGGGCTTGGCGGCCTGTACTTGTGAGCATACCCGAGTAAATTACCAATTTACTAGGTATATTGTACCTGATTAATTAGAGATAAAATAAATACGAGTAGTACAATCATATATTAGGAGTTAAAACTTATTAAATTCTCTCTGATTTTGTGGCAAAGTATATCCATTTCACAGCTTAATTCCGTAATTTTTCCAATGTTACGGCAAATTAGCATGAACAATGATCGTAAATTTGAAATTTCATGAATGACTTTAATCTAAAAAGTTCACTTTGTATTTCTCTAATTTAATT</gDNA_template>
            <first_frame> T  D  G  P  Y  Y  S  A  V  L  N  P  S  Q  F  P  P  S  S  L  P  F  L  L  T  K  K  T  I  V  K  I  C  R  N  T  Y  L  R  S  Q  R  K  W  L  L  C  R  N  S  S  F  S  Q  L  N  V  Q  *  Q  E  V  Q  P  G  V  Q  Q  Q  A  Q  L  F  T  S  A  D  G  R  L  S  V  C  S  S  V  V  A  S  A  A  E  V  A  V  G  C  L  D  G  K  S  V  R  R  I  G  L  L  E  I  A  I  R  R  R  R  G  R  N  W  W  S  V  I  S  *  R  T  C  L  F  R  R  L  R  R  L  L  K  I  R  D  K  D  S  R  R  Q  P  L  V  P  A  A  G  L  V  Q  D  Q  L  F  G  E  *  A  Y  A  R  F  G  R  Y  Q  R  H  S  G  N  G  Y  C  G  G  L  G  G  L  Y  L  *  A  Y  P  S  K  L  P  I  Y  *  V  Y  C  T  *  L  I  R  D  K  I  N  T  S  S  T  I  I  Y  *  E  L  K  L  I  K  F  S  L  I  L  W  Q  S  I  S  I  S  Q  L  N  S  V  I  F  P  M  L  R  Q  I  S  M  N  N  D  R  K  F  E  I  S  *  M  T  L  I  *  K  V  H  F  V  F  L  *  F  N  </first_frame>
            <second_frame>  Q  T  V  H  I  I  R  P  Y  *  I  L  P  N  S  P  H  L  H  Y  H  F  C  *  P  K  K  Q  *  L  K  F  V  E  I  R  T  S  D  R  N  E  N  G  Y  F  A  E  I  Q  A  S  R  N  S  M  C  S  S  R  K  S  N  P  E  S  N  N  K  P  S  Y  S  P  P  P  T  E  D  S  P  Y  A  P  Q  S  *  H  R  R  R  K  W  P  *  A  A  S  T  G  S  L  F  A  G  S  V  C  W  R  S  R  F  D  G  E  G  E  G  T  G  G  Q  S  *  A  E  G  L  V  C  F  V  A  S  V  V  C  *  K  Y  E  T  R  T  L  A  G  S  L  W  C  R  R  R  V  *  F  R  I  S  C  S  A  N  R  L  T  L  A  S  A  V  I  S  D  I  P  A  T  A  T  A  E  G  L  A  A  C  T  C  E  H  T  R  V  N  Y  Q  F  T  R  Y  I  V  P  D  *  L  E  I  K  *  I  R  V  V  Q  S  Y  I  R  S  *  N  L  L  N  S  L  *  F  C  G  K  V  Y  P  F  H  S  L  I  P  *  F  F  Q  C  Y  G  K  L  A  *  T  M  I  V  N  L  K  F  H  E  *  L  *  S  K  K  F  T  L  Y  F  S  N  L  I </second_frame>
            <third_frame>   R  R  S  I  L  F  G  R  T  K  S  F  P  I  P  P  I  F  T  T  I  F  A  N  Q  K  N  N  S  *  N  L  S  K  Y  V  P  Q  I  A  T  K  M  A  T  L  Q  K  F  K  L  L  A  T  Q  C  A  V  A  G  S  P  T  R  S  P  T  T  S  P  V  I  H  L  R  R  R  K  T  L  R  M  L  L  S  R  S  I  G  G  G  S  G  R  R  L  P  R  R  E  V  C  S  P  D  R  F  V  G  D  R  D  S  T  E  K  G  K  E  L  V  V  S  H  K  L  K  D  L  F  V  S  S  P  P  S  F  A  E  N  T  R  Q  G  L  S  P  A  A  S  G  A  G  G  G  F  S  S  G  S  A  V  R  R  I  G  L  R  S  L  R  P  L  S  A  T  F  R  Q  R  L  L  R  R  A  W  R  P  V  L  V  S  I  P  E  *  I  T  N  L  L  G  I  L  Y  L  I  N  *  R  *  N  K  Y  E  *  Y  N  H  I  L  G  V  K  T  Y  *  I  L  S  D  F  V  A  K  Y  I  H  F  T  A  *  F  R  N  F  S  N  V  T  A  N  *  H  E  Q  *  S  *  I  *  N  F  M  N  D  F  N  L  K  S  S  L  C  I  S  L  I  *   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0011O23.1" strand="+"/>
                <serials PGL_serial="19" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="131217" stop="131714"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>495</number_coding_nucleotides>
                  <number_encoded_amino_acids>165</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NLSKYVPQIATKMATLQKFKLLATQCAVAGSPTRSPTTSPVIHLRRRKTLRMLLSRSIGGGSGRRLPRREVCSPDRFVGDRDSTEKGKELVVSHKLKDLFVSSPPSFAENTRQGLSPAASGAGGGFSSGSAVRRIGLRSLRPLSATFRQRLLRRAWRPVLVSIPE*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="20" PGL_strand="+" PGL_start="135798" PGL_stop="138437"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="135798" e_stop="135909"/>
            <exon e_start="136044" e_stop="136091"/>
            <exon e_start="136236" e_stop="136305"/>
            <exon e_start="136570" e_stop="136660"/>
            <exon e_start="136740" e_stop="136801"/>
            <exon e_start="137898" e_stop="138166"/>
            <exon e_start="138264" e_stop="138297"/>
            <exon e_start="138377" e_stop="138437"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.981" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.957" acc_prob="0.869" e_score="1.000"/>
          <exon-intron don_prob="0.446" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.883" acc_prob="0.984" e_score="1.000"/>
          <exon-intron don_prob="0.990" acc_prob="0.213" e_score="0.993"/>
          <exon-intron don_prob="0.930" acc_prob="0.998" e_score="1.000"/>
          <exon-only e_score="0.902"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="135798" e_stop="135909" e_length="112"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.995">
            <gDNA_intron_boundary i_start="135910" i_stop="136043" i_length="134"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="136044" e_stop="136091" e_length="48"/>
          </exon>
          <intron i_serial="2" don_prob="0.981" acc_prob="0.999">
            <gDNA_intron_boundary i_start="136092" i_stop="136235" i_length="144"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="136236" e_stop="136305" e_length="70"/>
          </exon>
          <intron i_serial="3" don_prob="0.957" acc_prob="0.869">
            <gDNA_intron_boundary i_start="136306" i_stop="136569" i_length="264"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="136570" e_stop="136660" e_length="91"/>
          </exon>
          <intron i_serial="4" don_prob="0.446" acc_prob="0.999">
            <gDNA_intron_boundary i_start="136661" i_stop="136739" i_length="79"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="136740" e_stop="136801" e_length="62"/>
          </exon>
          <intron i_serial="5" don_prob="0.883" acc_prob="0.984">
            <gDNA_intron_boundary i_start="136802" i_stop="137897" i_length="1096"/>
          </intron>
          <exon e_serial="6" e_score="0.993">
            <gDNA_exon_boundary e_start="137898" e_stop="138166" e_length="269"/>
          </exon>
          <intron i_serial="6" don_prob="0.990" acc_prob="0.213">
            <gDNA_intron_boundary i_start="138167" i_stop="138263" i_length="97"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="138264" e_stop="138297" e_length="34"/>
          </exon>
          <intron i_serial="7" don_prob="0.930" acc_prob="0.998">
            <gDNA_intron_boundary i_start="138298" i_stop="138376" i_length="79"/>
          </intron>
          <exon e_serial="8" e_score="0.902">
            <gDNA_exon_boundary e_start="138377" e_stop="138437" e_length="61"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="135798" stop="135909"/>
              <exon start="136044" stop="136091"/>
              <exon start="136236" stop="136305"/>
              <exon start="136570" stop="136660"/>
              <exon start="136740" stop="136801"/>
              <exon start="137898" stop="138166"/>
              <exon start="138264" stop="138297"/>
              <exon start="138377" stop="138437"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U583331" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="20" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATATCTCCCGCCAAAGCTTGTCATTCAAATTCTTCATTTTGAGAAACTGAATTGAACAACGCCGCCGGCATTTCCATTCCCCAGTTTTCCGATGTCGGCTTCTTTACCCAAG : ATGGAGGCGCTTTATTCTAAGCTCTACAGCAAGTACGCTAAGCTCAAG : AAAGAAAAAGACACTAGCATGGAGAACCTGAATCGGGAACAAGAGGAGAAATTTGTGAATTATGTGGCTG : CTGCCGATGCAGTGATTGACCACTTGAGAAGTGAAACGGACAGACTAAAGGAACAAGTAAATGAGTTGAGGAGTGAAATGACATCAATGAG : GTCTGCCAATGATGAAGAAATGATTCGATACCAAAAGCTTTTGATGGAAGAGAACCTGAAGA : ATACGGAACTCCGTGATGAAATTCAGAGGCTTCAACAACATGATCAGCAGGGGACCTGTTTCAACGCTAGCAATGATAAAGGAAAAAGCAGACAAATTATTACTGATGGAGATTTTCTTCCAGATGCATTGGATGACTCAACCATAACAAACAAGAAACACTTTAGGCAGTCTTTGCTCATTGTACAAGACACACATACACCGTCTCCCATGGAAGAACTTCCAAATAGACCTGAACAACCAAGTACGAGTTCATATAAGTACACCAAG : CCTGCTTGCTGTAGAAGAAATGTTGACATTTCAG : GTGATAGTGCTGCTGACATATCTCCAGCCTTGTGCATCTTCCAAGACCTTGTTCAGTGGTT</gDNA_template>
            <first_frame> I  S  P  A  K  A  C  H  S  N  S  S  F  *  E  T  E  L  N  N  A  A  G  I  S  I  P  Q  F  S  D  V  G  F  F  T  Q   : D  G  G  A  L  F  *  A  L  Q  Q  V  R  *  A  Q   : E  R  K  R  H  *  H  G  E  P  E  S  G  T  R  G  E  I  C  E  L  C  G  C :   C  R  C  S  D  *  P  L  E  K  *  N  G  Q  T  K  G  T  S  K  *  V  E  E  *  N  D  I  N  E  :  V  C  Q  *  *  R  N  D  S  I  P  K  A  F  D  G  R  E  P  E  E :   Y  G  T  P  *  *  N  S  E  A  S  T  T  *  S  A  G  D  L  F  Q  R  *  Q  *  *  R  K  K  Q  T  N  Y  Y  *  W  R  F  S  S  R  C  I  G  *  L  N  H  N  K  Q  E  T  L  *  A  V  F  A  H  C  T  R  H  T  Y  T  V  S  H  G  R  T  S  K  *  T  *  T  T  K  Y  E  F  I  *  V  H  Q   : A  C  L  L  *  K  K  C  *  H  F  R :   *  *  C  C  *  H  I  S  S  L  V  H  L  P  R  P  C  S  V  V </first_frame>
            <second_frame>  Y  L  P  P  K  L  V  I  Q  I  L  H  F  E  K  L  N  *  T  T  P  P  A  F  P  F  P  S  F  P  M  S  A  S  L  P  K  :  M  E  A  L  Y  S  K  L  Y  S  K  Y  A  K  L  K  :  K  E  K  D  T  S  M  E  N  L  N  R  E  Q  E  E  K  F  V  N  Y  V  A   : A  A  D  A  V  I  D  H  L  R  S  E  T  D  R  L  K  E  Q  V  N  E  L  R  S  E  M  T  S  M  R :   S  A  N  D  E  E  M  I  R  Y  Q  K  L  L  M  E  E  N  L  K   : N  T  E  L  R  D  E  I  Q  R  L  Q  Q  H  D  Q  Q  G  T  C  F  N  A  S  N  D  K  G  K  S  R  Q  I  I  T  D  G  D  F  L  P  D  A  L  D  D  S  T  I  T  N  K  K  H  F  R  Q  S  L  L  I  V  Q  D  T  H  T  P  S  P  M  E  E  L  P  N  R  P  E  Q  P  S  T  S  S  Y  K  Y  T  K  :  P  A  C  C  R  R  N  V  D  I  S   : G  D  S  A  A  D  I  S  P  A  L  C  I  F  Q  D  L  V  Q  W   </second_frame>
            <third_frame>   I  S  R  Q  S  L  S  F  K  F  F  I  L  R  N  *  I  E  Q  R  R  R  H  F  H  S  P  V  F  R  C  R  L  L  Y  P  R :   W  R  R  F  I  L  S  S  T  A  S  T  L  S  S  R :   K  K  K  T  L  A  W  R  T  *  I  G  N  K  R  R  N  L  *  I  M  W  L  :  L  P  M  Q  *  L  T  T  *  E  V  K  R  T  D  *  R  N  K  *  M  S  *  G  V  K  *  H  Q  *   : G  L  P  M  M  K  K  *  F  D  T  K  S  F  *  W  K  R  T  *  R  :  I  R  N  S  V  M  K  F  R  G  F  N  N  M  I  S  R  G  P  V  S  T  L  A  M  I  K  E  K  A  D  K  L  L  L  M  E  I  F  F  Q  M  H  W  M  T  Q  P  *  Q  T  R  N  T  L  G  S  L  C  S  L  Y  K  T  H  I  H  R  L  P  W  K  N  F  Q  I  D  L  N  N  Q  V  R  V  H  I  S  T  P  S :   L  L  A  V  E  E  M  L  T  F  Q  :  V  I  V  L  L  T  Y  L  Q  P  C  A  S  S  K  T  L  F  S  G  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0011O23.1" strand="+"/>
                <serials PGL_serial="20" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="135853" stop="135909"/>
                    <exon start="136044" stop="136091"/>
                    <exon start="136236" stop="136305"/>
                    <exon start="136570" stop="136660"/>
                    <exon start="136740" stop="136801"/>
                    <exon start="137898" stop="138166"/>
                    <exon start="138264" stop="138297"/>
                    <exon start="138377" stop="138435"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>690</number_coding_nucleotides>
                  <number_encoded_amino_acids>230</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TTPPAFPFPSFPMSASLPKMEALYSKLYSKYAKLKKEKDTSMENLNREQEEKFVNYVAAADAVIDHLRSETDRLKEQVNELRSEMTSMRSANDEEMIRYQKLLMEENLKNTELRDEIQRLQQHDQQGTCFNASNDKGKSRQIITDGDFLPDALDDSTITNKKHFRQSLLIVQDTHTPSPMEELPNRPEQPSTSSYKYTKPACCRRNVDISGDSAADISPALCIFQDLVQW</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="21" PGL_strand="-" PGL_start="146318" PGL_stop="143456"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="146318" e_stop="146234"/>
            <exon e_start="146134" e_stop="145984"/>
            <exon e_start="144401" e_stop="144206"/>
            <exon e_start="143879" e_stop="143456"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.889" acc_prob="0.991" e_score="0.988"/>
          <exon-intron don_prob="0.999" acc_prob="0.978" e_score="1.000"/>
          <exon-intron don_prob="0.979" acc_prob="0.958" e_score="1.000"/>
          <exon-only e_score="0.986"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.988">
            <gDNA_exon_boundary e_start="146318" e_stop="146234" e_length="85"/>
          </exon>
          <intron i_serial="1" don_prob="0.889" acc_prob="0.991">
            <gDNA_intron_boundary i_start="146233" i_stop="146135" i_length="99"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="146134" e_stop="145984" e_length="151"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.978">
            <gDNA_intron_boundary i_start="145983" i_stop="144402" i_length="1582"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="144401" e_stop="144206" e_length="196"/>
          </exon>
          <intron i_serial="3" don_prob="0.979" acc_prob="0.958">
            <gDNA_intron_boundary i_start="144205" i_stop="143880" i_length="326"/>
          </intron>
          <exon e_serial="4" e_score="0.986">
            <gDNA_exon_boundary e_start="143879" e_stop="143456" e_length="424"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="146318" stop="146234"/>
              <exon start="146134" stop="145984"/>
              <exon start="144401" stop="144206"/>
              <exon start="143879" stop="143456"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U580278" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="21" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TACGACAATTTCCGCCCTCTCAGAGTCTCAGTACCCCTTCAACTCTGCTGCCGCAGCTGAAACATCTTCCCGTGGAAGCGCCATG : GCTTCAGAGAAGAAATTGAGCAATCCCATGAGGGATATCAAGGTCCAGAAGCTTGTCCTCAATATCTCCGTCGGTGAGAGTGGAGATCGACTCACCAGAGCAGCGAAAGTCTTGGAGCAACTCAGCGGTCAATCCCCTGTTTTCTCTAAGG : CAAGGTATACTGTGCGGTCCTTTGGAATCAGGCGTAATGAAAAGATAGCTTGCTATGTGACTGTCAGAGGGGAGAAAGCTATGCAGCTTCTTGAGAGTGGATTGAAAGTTAAGGAATACGAGTTGTTGAGAAGGAACTTCAGTGAGACCGGCTGCTTTGGGTTTGGTATTCAGGAGCACATTGATCTTGGAATTAA : ATATGATCCTTCAACTGGTATTTATGGAATGGATTTCTATGTTGTATTGGAGCGCCCTGGCTACCGTGTTGCCCGTCGTCGCAGGTGCAAGTCTCGAGTCGGGATTCAGCACAGGGTCACTAAGGAGGATTCAATGAAGTGGTTCCAGGTCAAATATGAAGGTGTTATCCTTAACAAGTCCTCAAACATTCAGTGATAAGCTGAGTGCCAACTTTTGGACCAGCTTGTCTCCTGGCAAGTTTATTTTTATGTATTTTTGTAGACAGCCATCGATATTACTATTAAAGGAATGTTTTGGAGAGATTCTAGTTGGCAAATTAGTATGTTTTACTTCTCATTTTGGCAATCAGATGAATTCAAATCTTTGTGATGGTAATTTTCAGTTTTTGCAATTTAAGTAGGAATTATTCAACTACACAATTGT</gDNA_template>
            <first_frame> Y  D  N  F  R  P  L  R  V  S  V  P  L  Q  L  C  C  R  S  *  N  I  F  P  W  K  R  H   : G  F  R  E  E  I  E  Q  S  H  E  G  Y  Q  G  P  E  A  C  P  Q  Y  L  R  R  *  E  W  R  S  T  H  Q  S  S  E  S  L  G  A  T  Q  R  S  I  P  C  F  L  *  G :   K  V  Y  C  A  V  L  W  N  Q  A  *  *  K  D  S  L  L  C  D  C  Q  R  G  E  S  Y  A  A  S  *  E  W  I  E  S  *  G  I  R  V  V  E  K  E  L  Q  *  D  R  L  L  W  V  W  Y  S  G  A  H  *  S  W  N  *  :  I  *  S  F  N  W  Y  L  W  N  G  F  L  C  C  I  G  A  P  W  L  P  C  C  P  S  S  Q  V  Q  V  S  S  R  D  S  A  Q  G  H  *  G  G  F  N  E  V  V  P  G  Q  I  *  R  C  Y  P  *  Q  V  L  K  H  S  V  I  S  *  V  P  T  F  G  P  A  C  L  L  A  S  L  F  L  C  I  F  V  D  S  H  R  Y  Y  Y  *  R  N  V  L  E  R  F  *  L  A  N  *  Y  V  L  L  L  I  L  A  I  R  *  I  Q  I  F  V  M  V  I  F  S  F  C  N  L  S  R  N  Y  S  T  T  Q  L  </first_frame>
            <second_frame>  T  T  I  S  A  L  S  E  S  Q  Y  P  F  N  S  A  A  A  A  E  T  S  S  R  G  S  A  M  :  A  S  E  K  K  L  S  N  P  M  R  D  I  K  V  Q  K  L  V  L  N  I  S  V  G  E  S  G  D  R  L  T  R  A  A  K  V  L  E  Q  L  S  G  Q  S  P  V  F  S  K   : A  R  Y  T  V  R  S  F  G  I  R  R  N  E  K  I  A  C  Y  V  T  V  R  G  E  K  A  M  Q  L  L  E  S  G  L  K  V  K  E  Y  E  L  L  R  R  N  F  S  E  T  G  C  F  G  F  G  I  Q  E  H  I  D  L  G  I  K :   Y  D  P  S  T  G  I  Y  G  M  D  F  Y  V  V  L  E  R  P  G  Y  R  V  A  R  R  R  R  C  K  S  R  V  G  I  Q  H  R  V  T  K  E  D  S  M  K  W  F  Q  V  K  Y  E  G  V  I  L  N  K  S  S  N  I  Q  *  *  A  E  C  Q  L  L  D  Q  L  V  S  W  Q  V  Y  F  Y  V  F  L  *  T  A  I  D  I  T  I  K  G  M  F  W  R  D  S  S  W  Q  I  S  M  F  Y  F  S  F  W  Q  S  D  E  F  K  S  L  *  W  *  F  S  V  F  A  I  *  V  G  I  I  Q  L  H  N  C </second_frame>
            <third_frame>   R  Q  F  P  P  S  Q  S  L  S  T  P  S  T  L  L  P  Q  L  K  H  L  P  V  E  A  P  W :   L  Q  R  R  N  *  A  I  P  *  G  I  S  R  S  R  S  L  S  S  I  S  P  S  V  R  V  E  I  D  S  P  E  Q  R  K  S  W  S  N  S  A  V  N  P  L  F  S  L  R  :  Q  G  I  L  C  G  P  L  E  S  G  V  M  K  R  *  L  A  M  *  L  S  E  G  R  K  L  C  S  F  L  R  V  D  *  K  L  R  N  T  S  C  *  E  G  T  S  V  R  P  A  A  L  G  L  V  F  R  S  T  L  I  L  E  L   : N  M  I  L  Q  L  V  F  M  E  W  I  S  M  L  Y  W  S  A  L  A  T  V  L  P  V  V  A  G  A  S  L  E  S  G  F  S  T  G  S  L  R  R  I  Q  *  S  G  S  R  S  N  M  K  V  L  S  L  T  S  P  Q  T  F  S  D  K  L  S  A  N  F  W  T  S  L  S  P  G  K  F  I  F  M  Y  F  C  R  Q  P  S  I  L  L  L  K  E  C  F  G  E  I  L  V  G  K  L  V  C  F  T  S  H  F  G  N  Q  M  N  S  N  L  C  D  G  N  F  Q  F  L  Q  F  K  *  E  L  F  N  Y  T  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0011O23.1" strand="-"/>
                <serials PGL_serial="21" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="146317" stop="146234"/>
                    <exon start="146134" stop="145984"/>
                    <exon start="144401" stop="144206"/>
                    <exon start="143879" stop="143684"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>624</number_coding_nucleotides>
                  <number_encoded_amino_acids>208</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TTISALSESQYPFNSAAAAETSSRGSAMASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSETGCFGFGIQEHIDLGIKYDPSTGIYGMDFYVVLERPGYRVARRRRCKSRVGIQHRVTKEDSMKWFQVKYEGVILNKSSNIQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="22" PGL_strand="+" PGL_start="148455" PGL_stop="149294"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="148455" e_stop="149294"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.981"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.981">
            <gDNA_exon_boundary e_start="148455" e_stop="149294" e_length="840"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="148455" stop="149294"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U584418" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="22" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AACTGTTGGCTCAGCGGAAGTCCAGAAACTGGCAAAGAGAGCTTTTTGAAATTTTCTTTCTCATTCTCTTGCTAGATAGCGGGTCAAAGGCTATTGATTTCGTTCGTTGTTTTTAGGTATTTACTCTTTCAGTTATGCATTGTTTTTTGTGTGCAAATCGGTGATTCTGTATTTTTTTTATATGTTCATGTGCATTGATCATTTCCTTTCAAACAGCGATTTCATAAGCATTTGATATCTGAGAAGTATAAATTCTGTCATTTTTGTTCGAAAAGTTGTTCAGATTTCAGGTGTGAACTGTTTTGAGTAGATGCGGAGAATCAAAGATAAATTATCAACAAGGTTAATGAATGTTTGTGTGGCATCTCTTTGTAAAGCCAAACAATTAGAGAAAGCTGAAATTGTTATAGTTGATGGCATACGAATTGGATTGCAACCAGATGTTGTCACTTACAATACATTGATTGCTGCATATTGCCGCTTTGTTGGCATAGATGCTGGTTATTCCATCCTTAATAGGATGAAGGATGCTGGAATTAACCCTGATGTTATTACCTATAACGCTTTGATCGCCGGAGCTACTAGAAATTCTCTGTTATCTAAATGTCTCGACCTGTTTGATGAAATGCTTGAGATGAGAATTCTTCCTGATATCTGGAGTTACAACACATTAATGAATTGTTTCTTTAAATTCGGAAAGCCAGATGAAGCTTACAGGGTTTTTCAAGATATTCTTTTGAAAGATATATCTGTTCATTCTGCAACATTTAGTATTTTAATTAATGGGCTGTGTATGAATGGATATACTGAGAATGCCCTTATGCTATTTAGGAGTTTAAA</gDNA_template>
            <first_frame> N  C  W  L  S  G  S  P  E  T  G  K  E  S  F  L  K  F  S  F  S  F  S  C  *  I  A  G  Q  R  L  L  I  S  F  V  V  F  R  Y  L  L  F  Q  L  C  I  V  F  C  V  Q  I  G  D  S  V  F  F  L  Y  V  H  V  H  *  S  F  P  F  K  Q  R  F  H  K  H  L  I  S  E  K  Y  K  F  C  H  F  C  S  K  S  C  S  D  F  R  C  E  L  F  *  V  D  A  E  N  Q  R  *  I  I  N  K  V  N  E  C  L  C  G  I  S  L  *  S  Q  T  I  R  E  S  *  N  C  Y  S  *  W  H  T  N  W  I  A  T  R  C  C  H  L  Q  Y  I  D  C  C  I  L  P  L  C  W  H  R  C  W  L  F  H  P  *  *  D  E  G  C  W  N  *  P  *  C  Y  Y  L  *  R  F  D  R  R  S  Y  *  K  F  S  V  I  *  M  S  R  P  V  *  *  N  A  *  D  E  N  S  S  *  Y  L  E  L  Q  H  I  N  E  L  F  L  *  I  R  K  A  R  *  S  L  Q  G  F  S  R  Y  S  F  E  R  Y  I  C  S  F  C  N  I  *  Y  F  N  *  W  A  V  Y  E  W  I  Y  *  E  C  P  Y  A  I  *  E  F  K </first_frame>
            <second_frame>  T  V  G  S  A  E  V  Q  K  L  A  K  R  A  F  *  N  F  L  S  H  S  L  A  R  *  R  V  K  G  Y  *  F  R  S  L  F  L  G  I  Y  S  F  S  Y  A  L  F  F  V  C  K  S  V  I  L  Y  F  F  Y  M  F  M  C  I  D  H  F  L  S  N  S  D  F  I  S  I  *  Y  L  R  S  I  N  S  V  I  F  V  R  K  V  V  Q  I  S  G  V  N  C  F  E  *  M  R  R  I  K  D  K  L  S  T  R  L  M  N  V  C  V  A  S  L  C  K  A  K  Q  L  E  K  A  E  I  V  I  V  D  G  I  R  I  G  L  Q  P  D  V  V  T  Y  N  T  L  I  A  A  Y  C  R  F  V  G  I  D  A  G  Y  S  I  L  N  R  M  K  D  A  G  I  N  P  D  V  I  T  Y  N  A  L  I  A  G  A  T  R  N  S  L  L  S  K  C  L  D  L  F  D  E  M  L  E  M  R  I  L  P  D  I  W  S  Y  N  T  L  M  N  C  F  F  K  F  G  K  P  D  E  A  Y  R  V  F  Q  D  I  L  L  K  D  I  S  V  H  S  A  T  F  S  I  L  I  N  G  L  C  M  N  G  Y  T  E  N  A  L  M  L  F  R  S  L   </second_frame>
            <third_frame>   L  L  A  Q  R  K  S  R  N  W  Q  R  E  L  F  E  I  F  F  L  I  L  L  L  D  S  G  S  K  A  I  D  F  V  R  C  F  *  V  F  T  L  S  V  M  H  C  F  L  C  A  N  R  *  F  C  I  F  F  I  C  S  C  A  L  I  I  S  F  Q  T  A  I  S  *  A  F  D  I  *  E  V  *  I  L  S  F  L  F  E  K  L  F  R  F  Q  V  *  T  V  L  S  R  C  G  E  S  K  I  N  Y  Q  Q  G  *  *  M  F  V  W  H  L  F  V  K  P  N  N  *  R  K  L  K  L  L  *  L  M  A  Y  E  L  D  C  N  Q  M  L  S  L  T  I  H  *  L  L  H  I  A  A  L  L  A  *  M  L  V  I  P  S  L  I  G  *  R  M  L  E  L  T  L  M  L  L  P  I  T  L  *  S  P  E  L  L  E  I  L  C  Y  L  N  V  S  T  C  L  M  K  C  L  R  *  E  F  F  L  I  S  G  V  T  T  H  *  *  I  V  S  L  N  S  E  S  Q  M  K  L  T  G  F  F  K  I  F  F  *  K  I  Y  L  F  I  L  Q  H  L  V  F  *  L  M  G  C  V  *  M  D  I  L  R  M  P  L  C  Y  L  G  V  *  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0011O23.1" strand="+"/>
                <serials PGL_serial="22" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="148765" stop="149292"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>528</number_coding_nucleotides>
                  <number_encoded_amino_acids>176</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>MRRIKDKLSTRLMNVCVASLCKAKQLEKAEIVIVDGIRIGLQPDVVTYNTLIAAYCRFVGIDAGYSILNRMKDAGINPDVITYNALIAGATRNSLLSKCLDLFDEMLEMRILPDIWSYNTLMNCFFKFGKPDEAYRVFQDILLKDISVHSATFSILINGLCMNGYTENALMLFRSL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="23" PGL_strand="+" PGL_start="158063" PGL_stop="158876"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="158063" e_stop="158876"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.995"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.995">
            <gDNA_exon_boundary e_start="158063" e_stop="158876" e_length="814"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="158063" stop="158876"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U575207" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="158063" stop="158293"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U588066" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="23" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GAGAAAATTTCAAATATATATGATTAGTTCAAGCTAATAATTATAAGCATGAATGAAGGATATATATGAACAAAAAAGTTAAAGACAATTCACGTAAAGTAAAGTATTGATTGTTTAGTGTCGCCTCTTCACAAGAGGCTTATTGACTAGGAAGAGTATGTCTTAGAACCTTGATGAAGATTAAGCGAGGCAAAGCGCCTCAACACGTTTTGAGCCTCGCTTCAGGGCTAAGTGCACTTTTGACAACACTGGTCAAACTTTAATTAGAATGTTGCTTTGTGCGTCAAAACATCTTAATCTGTCTTTATATAGTTTTCTGCTTAATGTTATTAACAAATATGTGTGAGACCTGACACAGGTATATAAGAAAGTTTCAGTTCTTAATCTTGGATTTTTCATTCATTGCTTGCTCTAGGAACTCATTTGGTATTCATATGGGTCTATTCCGTTGTTGCTGTTTGTTGTTTAAATTATAATGAAATCATCCTTTCTCTGAAACAGCCATCTGAATGTAATACATACGCGGACATTGATGCAGTATATAAATGCTTAAAGGAGCAATATGAGGTCAAAGATGAACAGTTAATAATCTATGGTCAATCTGTTGGCAGTGGCCCAACTGTTGATCTTGCATCACGAGTACCCAATTTACGAGGTGTTGTTTTACATAGTCCAATATTGTCTGGTGTAAGAGTTTTGTACCCTGTCAAGCGGACATATTGGTTTGACATATACAAGGTAAAACACTCTCAGTGGTTATCTGTACGTAATGCTTTTCCATCTCCACTTGTAAAATCTGATTCCATTACTCCAA</gDNA_template>
            <first_frame> E  K  I  S  N  I  Y  D  *  F  K  L  I  I  I  S  M  N  E  G  Y  I  *  T  K  K  L  K  T  I  H  V  K  *  S  I  D  C  L  V  S  P  L  H  K  R  L  I  D  *  E  E  Y  V  L  E  P  *  *  R  L  S  E  A  K  R  L  N  T  F  *  A  S  L  Q  G  *  V  H  F  *  Q  H  W  S  N  F  N  *  N  V  A  L  C  V  K  T  S  *  S  V  F  I  *  F  S  A  *  C  Y  *  Q  I  C  V  R  P  D  T  G  I  *  E  S  F  S  S  *  S  W  I  F  H  S  L  L  A  L  G  T  H  L  V  F  I  W  V  Y  S  V  V  A  V  C  C  L  N  Y  N  E  I  I  L  S  L  K  Q  P  S  E  C  N  T  Y  A  D  I  D  A  V  Y  K  C  L  K  E  Q  Y  E  V  K  D  E  Q  L  I  I  Y  G  Q  S  V  G  S  G  P  T  V  D  L  A  S  R  V  P  N  L  R  G  V  V  L  H  S  P  I  L  S  G  V  R  V  L  Y  P  V  K  R  T  Y  W  F  D  I  Y  K  V  K  H  S  Q  W  L  S  V  R  N  A  F  P  S  P  L  V  K  S  D  S  I  T  P  </first_frame>
            <second_frame>  R  K  F  Q  I  Y  M  I  S  S  S  *  *  L  *  A  *  M  K  D  I  Y  E  Q  K  S  *  R  Q  F  T  *  S  K  V  L  I  V  *  C  R  L  F  T  R  G  L  L  T  R  K  S  M  S  *  N  L  D  E  D  *  A  R  Q  S  A  S  T  R  F  E  P  R  F  R  A  K  C  T  F  D  N  T  G  Q  T  L  I  R  M  L  L  C  A  S  K  H  L  N  L  S  L  Y  S  F  L  L  N  V  I  N  K  Y  V  *  D  L  T  Q  V  Y  K  K  V  S  V  L  N  L  G  F  F  I  H  C  L  L  *  E  L  I  W  Y  S  Y  G  S  I  P  L  L  L  F  V  V  *  I  I  M  K  S  S  F  L  *  N  S  H  L  N  V  I  H  T  R  T  L  M  Q  Y  I  N  A  *  R  S  N  M  R  S  K  M  N  S  *  *  S  M  V  N  L  L  A  V  A  Q  L  L  I  L  H  H  E  Y  P  I  Y  E  V  L  F  Y  I  V  Q  Y  C  L  V  *  E  F  C  T  L  S  S  G  H  I  G  L  T  Y  T  R  *  N  T  L  S  G  Y  L  Y  V  M  L  F  H  L  H  L  *  N  L  I  P  L  L  Q </second_frame>
            <third_frame>   E  N  F  K  Y  I  *  L  V  Q  A  N  N  Y  K  H  E  *  R  I  Y  M  N  K  K  V  K  D  N  S  R  K  V  K  Y  *  L  F  S  V  A  S  S  Q  E  A  Y  *  L  G  R  V  C  L  R  T  L  M  K  I  K  R  G  K  A  P  Q  H  V  L  S  L  A  S  G  L  S  A  L  L  T  T  L  V  K  L  *  L  E  C  C  F  V  R  Q  N  I  L  I  C  L  Y  I  V  F  C  L  M  L  L  T  N  M  C  E  T  *  H  R  Y  I  R  K  F  Q  F  L  I  L  D  F  S  F  I  A  C  S  R  N  S  F  G  I  H  M  G  L  F  R  C  C  C  L  L  F  K  L  *  *  N  H  P  F  S  E  T  A  I  *  M  *  Y  I  R  G  H  *  C  S  I  *  M  L  K  G  A  I  *  G  Q  R  *  T  V  N  N  L  W  S  I  C  W  Q  W  P  N  C  *  S  C  I  T  S  T  Q  F  T  R  C  C  F  T  *  S  N  I  V  W  C  K  S  F  V  P  C  Q  A  D  I  L  V  *  H  I  Q  G  K  T  L  S  V  V  I  C  T  *  C  F  S  I  S  T  C  K  I  *  F  H  Y  S   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0011O23.1" strand="+"/>
                <serials PGL_serial="23" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="158447" stop="158875"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>429</number_coding_nucleotides>
                  <number_encoded_amino_acids>143</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SWIFHSLLALGTHLVFIWVYSVVAVCCLNYNEIILSLKQPSECNTYADIDAVYKCLKEQYEVKDEQLIIYGQSVGSGPTVDLASRVPNLRGVVLHSPILSGVRVLYPVKRTYWFDIYKVKHSQWLSVRNAFPSPLVKSDSITP</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 65 chains have been computed
$ 
$ memory statistics:
$ 54656 bytes spliced alignments in total
$ 26 spliced alignments have been stored
$ 2102 bytes was the average size of a spliced alignment
$ 32576 bytes predicted gene locations in total
$ 23 predicted gene locations have been stored
$ 1416 bytes was the average size of a predicted gene location
$ 2 megabytes was the average size of the backtrace matrix
$ 81 backtrace matrices have been allocated
$ 
$ date finished: 2009-12-01 08:15:26
-->
