<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-12-01 08:01:58"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C02HBa0012A12-ClXVT/GenomeThreader_SGN_U_tomato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C02HBa0012A12-ClXVT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0012A12-ClXVT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U570151" ref_strand="+" ref_description="SGN-U570151 Tomato 200607#2 [13 ESTs aligned] (*GB) gi|217074298|gb|ACJ85509.1| (e_value=2e-139) unknown; (*ATH) AT4G36960.1 (e_value=1e-135)  Symbol: None | RNA recognition motif (RRM)-containing protein, similar to SP:P48809 Heterogeneous nuclear ribonucleoprotein 27C (hnRNP 48) {Drosophila melanogaster}; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif)... ; (*SWP) sp|O94432|YHKF_SCHPO (e_value=3e-27) Uncharacterized RNA-binding protein C660.15 OS=Schizosaccharomyces pombe GN=SPBC660.15; ">
      <seq>aagagcagtggcttggggtttgaaggagctgagcggcgcgaggaagagcgagcggagcggactgagagagcgaattacggttttgataatcggaatcaagaaggtcagtgcagcgcgtaaatctaatttaatactcgttgtgattttaatttctttggcatccgaagatcttacagaaattggtgagtttgttctgaaatatgatgatgatgatgatatttgtgtgtgagaaagaggtgtgtgtctgttacctgcaggaagaatcgtcttgtgtgagcgattcgtttatagagagaggtgtggtgagatcgcgagagcgagttgagtgtatatcctacgatttccactctccgctaatcaatttgtcagacaagttttcgttaccatgtcggagaagaagcttgtggttttaggcatcccatgggacgtggatacagaaggtctaagggaatatatgatcaaatatggagatttagaggattgtattgtgatgaaggaacgtgctactggtcgttctcgtggattcggctatgtcacatttgctacagttgaggatgctaagaatgcattgtctaaggagcactttcttggaaacagaatgctagaagtgaaagtggcgacaccgaaggaggagatgagggctcctgcaaagaaagtgaccaggattttcgttgctaggattcctccgtctgtgtctgaagctactttcagaggttattttgagaagtacggtgaaataacagatctgtacatgccaaaggatccatctaccaagggacatcgtggaattgggtttattacttttgcaaatgctgaatcagttgatgatctgatgagtgacacccatgaactgggaggttccacaattgtggtggaccgagcaacacccaaggaagaagatttcagacctgttagtcggatgtctcagagtggaggaggatatggtgcatataatgcatatatgagtgcaactactagatatggtgcgcttggtgctcctaccttatatgatcatcctagttctatgtatggaagaggtggaggtggaggtggaggtggaggtggaggatttccatctcgtggtggcttgggccagaagatctttgttggtcgactacctcaagaggcaacaactgaagatcttcgccagtattttggtagatttggccgtgttttagatgtgtatgtcccaaaggatccaagaagaccagggcatagagggtttggttttgttacatttgctgatgatggtgttgcagatcgtgtttctcgaaggcctcatgagatatgtggacatcaggttgcaattgattctgctactcctcttgatgatgctggtccaagtaacaattacatgatggatcctcctcctcctgctcctgaagcatatgggggatatggtggtcctatgcgtacttatggaaggatgtatgggggcctagattatgatgattggggttacggcctgggtggtgggagaccttcaagatcagatatgagatacaggccctactagctggcctggttggataggaggcggtcaagatcagatatgagattcaggccctagtagctttgtgttgcaggaggtcagaggctgtctgaatttccaatgggtgacaacaatagatatgtcatatttatatcagtttattattaggtggacatcataatacatgtgctactaatacttaagtaattgaaaaagcagtgctgatggattgtgcaattcacttcatacttgatcctttgtattaaatgtattgaagaaacaaaggaatgggtgctaattcctatatccagaaagtaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0012A12-ClXVT/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0012A12.1" temp_strand="+" temp_description="C02HBa0012A12.1  AC215355.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0012A12 sequenced_by:kribb upload_account_name:korea">
        <position start="2067" stop="9918"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="2367" g_stop="2772" g_length="406"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="406" r_length="406" r_score="0.985"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="2773" i_stop="2854" i_length="82">
            <donor d_prob="0.960" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="2855" g_stop="2944" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="407" r_stop="496" r_length="90" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="2945" i_stop="4861" i_length="1917">
            <donor d_prob="0.902" d_score="1.00"/>
            <acceptor a_prob="0.872" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="4862" g_stop="4927" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="497" r_stop="562" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="4928" i_stop="5105" i_length="178">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="5106" g_stop="5171" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="563" r_stop="628" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="5172" i_stop="5439" i_length="268">
            <donor d_prob="0.972" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="5440" g_stop="5525" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="629" r_stop="714" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="5526" i_stop="5619" i_length="94">
            <donor d_prob="0.885" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="5620" g_stop="5665" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="715" r_stop="760" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="5666" i_stop="5771" i_length="106">
            <donor d_prob="0.899" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="5772" g_stop="5826" g_length="55"/>
          <reference_exon_boundary r_type="cDNA" r_start="761" r_stop="815" r_length="55" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="5827" i_stop="7052" i_length="1226">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="7053" g_stop="7129" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="816" r_stop="892" r_length="77" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="7130" i_stop="7245" i_length="116">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.954" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="7246" g_stop="7387" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="893" r_stop="1034" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="7388" i_stop="7597" i_length="210">
            <donor d_prob="0.585" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="7598" g_stop="7758" g_length="161"/>
          <reference_exon_boundary r_type="cDNA" r_start="1035" r_stop="1195" r_length="161" r_score="1.000"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="7759" i_stop="7862" i_length="104">
            <donor d_prob="0.982" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="7863" g_stop="7967" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="1196" r_stop="1300" r_length="105" r_score="1.000"/>
        </exon>
        <intron i_serial="11">
          <gDNA_intron_boundary i_start="7968" i_stop="8520" i_length="553">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="12">
          <gDNA_exon_boundary g_start="8521" g_stop="8673" g_length="153"/>
          <reference_exon_boundary r_type="cDNA" r_start="1301" r_stop="1453" r_length="153" r_score="1.000"/>
        </exon>
        <intron i_serial="12">
          <gDNA_intron_boundary i_start="8674" i_stop="9263" i_length="590">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="13">
          <gDNA_exon_boundary g_start="9264" g_stop="9618" g_length="355"/>
          <reference_exon_boundary r_type="cDNA" r_start="1454" r_stop="1811" r_length="358" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0012A12.1" gen_strand="+" ref_id="SGN-U570151" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>1808</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0012A12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U570151" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="2367" e_stop="2772"/>
          <exon e_start="2855" e_stop="2944"/>
          <exon e_start="4862" e_stop="4927"/>
          <exon e_start="5106" e_stop="5171"/>
          <exon e_start="5440" e_stop="5525"/>
          <exon e_start="5620" e_stop="5665"/>
          <exon e_start="5772" e_stop="5826"/>
          <exon e_start="7053" e_stop="7129"/>
          <exon e_start="7246" e_stop="7387"/>
          <exon e_start="7598" e_stop="7758"/>
          <exon e_start="7863" e_stop="7967"/>
          <exon e_start="8521" e_stop="8673"/>
          <exon e_start="9264" e_stop="9618"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGAGCAGTGGCTTGGGGTTTGAAGGAGCTGAGCGGCGCGAGGAAGAGCGAGCGGAGCGGAGTGAGAGAGCGAATTAGGGTTTTGATAATCGGAATCAAGAAGGTCAGTGGAGCGCGTAAATCTAATTTAGTACTCGTTGTGATTTTAATTTCTTTGGTATCCGAAGATCTTAGAGAAATTGGTGAGTTTGTTCTGAAATATGATGATGATGATGATATTTGTGTGTGAGAAAGAGGTGTGTGTCTGTTACCTGCAGGAAGAATCGTCTTGTGTGAGCGATTCGTTTATAGAGAGAGGTGTGGTGAGATCGCGAGAGCGAGTTGAGTGTATATCCTACGATTTCCACTCTCCGCTAATCAATTTGTCAGACAAGTTTTCGTTACCATGTCGGAGAAGAAGCTTGTGGTAAGTTTTGGTTTCTTTCTTGATTTTCAAGGCATGTTTGTCTTTGATTGCAATCTTAATGTGATTGCTTCTTGATTTTTAGGTTTTAGGCATCCCATGGGACGTGGATACAGAAGGTCTAAGGGAATATATGATCAAATATGGAGATTTAGAGGATTGTATTGTGATGAAGGTCAGTCTACGCAGCTACCTTGACTTTTATGATATGCATTGTTTCAGATATACTGTAGTTCCAAAGACTTTCATGACCTAACTGTGTGCAGTCTTGTTTTTTGTGTTGACAATGTTGTTTCTTTTTTTGTTTGTTAATTGTGCTTGTATCAGAAAATGAGATATCAAATCTGGGTTACAGAAGGTCATATATTTATCATTTGGTGCACAGCTTGCAGCTTTTAGTGCATTTAGCTTTCTTGTGAAAAACTTAGGGCTGTTATATCATTTATGGTGTAACAAAAACATAAGGATTTCCATTGCCCCAAACTATGTTATAGTTGTTAGGAGAAGGTTGTTGCTTCGCAGTTCGCTACTTGGAAAATTTAGCAGAACTATCCGCTTAAGAGATGTCACTTTTGGAATTCAACCAAGAACGTGTCCCAAACTGGTTTATTTCTTGTTAACTACATTGGTGGGCACATGAGAACTGGGTCTCAGGAGAAAATCTTGTCGAATAACTAAATGGCAATATTAGGGTTTTTAAAAACAAACGTGATTCACGACTCTCTTCTTCAATTTTCTCTTTGACACGTGTCTCTCTTCTTCAATTGTCTAGTAGATTCAAGATTGCGTTGGGTTCTTTCCTGGTAAAGTAAACCAGATTATCAAATGCGATTGCCTTTGGCCAGAGATTTTGCGCCTATTACTCGTAAGGCGCAACCCTGCAAAGGCGATCAATGGCGAGAAATGATGAGTGGTGAGGTGGCACCATTGTTGCCCTTTTATTTTATTCTTTTTGAAAAAAAACAAACGTGCTTAATAATTAAATGGCAATATTAGTGTTTTTAAAAACAAACGTGACTCACGACTCTCTTCTTCAATTTTCTCTTTGACACGTGACTCTCTTCTCCTCAGCTTCAGCCTTTAGTTACGTCTTCTTCTTCTTTCTCCTCTGCTTTGCAGCTTCTCTTCTGCCATAGTCAGCTGCTCTTTTTTTTGCTTCTTCATCTTCTTCTCTTCTTTTTTTTAGTAGGTCAATGTGCCCAGCTTCCTATTACTCTGTTAGTGATTCCTCTGTTCTTATTTTATGGTCTGTTTTTTTTAATTTTCTGCAGATGCAAATCTGCCTTTCTACAGAAAAATTCCAGGTCCTATTTTAATTTTTGTCCAACTCAACTTAGTCATACAAGTTCTTGGGTTCTAGTCTTGTTCGTCAAATTGTCTCATGAATTATTGAGTCATTCAAGTTCTATGGTTAGTTTTTAAATTGAAATATTTGCCAATATGGTATTGCTACTGAGATACTGGTTATTTATATATGCATTAAATATCTTCAGTTTTTTATATTAATTGGCGCCTCAATTCAAAGAGGCCAGCACCTCGCCACGAGGCAAGACATGCCCTTGTCGTCTTTCGACTTAACTTGCATTCCATTCCCAATTTTTGTGATGCTCTTTCCTTTCTAGTCATTCTTTAATAATGACATTTTTCAATATTTAGTAACATTTCAACTTTAAGCTACCAATTTTATCCCTAATGAAATGATTTATATGATTTATAGGCACACAAAAATCTATAGCTTATATTAGACCACAAGTTCCAAAAGTTTTCCTTTGTTTCTTAAATTCCGTGCAAAATCTAATACGTTCACATAAATTGGGACGTAGGGAGTACCAAACATTGCCATGTTTGTGTATTTTGATTCTGGTGTGTTTTGCCAATGATTTTATTGATTGCTTTTGTGACAATTTTAAACATAAAATCAACAGTGTATCAGAAGATTGATCCGTTTTACTAATTTCCCAAAAGTGTGCTGTCTGGTTTATATAGTTAATATATATTTGCATTTTAGTGCTTTGAAAGTAAATGTGCTTTCTGTTGCTAAATTTCTTATCATCTGACTGAAGAAGACTAATGAGTATTGATCTTCATCTAGGAACGTGCTACTGGTCGTTCTCGTGGATTCGGCTATGTCACATTTGCTACAGTTGAGGATGCTAAGGTGATTTTGGTTTTAATTTGGTTTTCATGTCATTGTTGCAATCATATTTGCATACTACCCTCCAGTTAAACTTTCTTACAATGTATGGTCTTGTTCTTCGTCCTTGGTATAGCTTATTTATGATTTTGTGGTTTTGATGCAAACTTGATTCCTACACTTGTGGATTTGTATGATGCAGAATGCATTGTCTAAGGAGCACTTTCTTGGAAACAGAATGCTAGAAGTGAAAGTGGCGACACCGAAGGTGCAATGCTCTTACTCTTAATGAAAAAACTTCTCTTTGTTACTTTAGTATTTCATCCAATGCTGTACTTTTACTATCTAGGCCAACTATTAATATATTGTGGTGGCTTGAGTTGATTAAAATGGAATGGTTATCATGGTTCATATTGATTTCTTCATTTGGTTGGACATGAAAATTGCATTATAACAAGTGAAAGCCCATTTTATAATCGTTGTGCCTCTAAATACTTTGTAAGGTCTAATACTGATGCTACTAATTTTTTTGGCAGGAGGAGATGAGGGCTCCTGCAAAGAAAGTGACCAGGATTTTCGTTGCTAGGATTCCTCCGTCTGTGTCTGAAGCTACTTTCAGAGGGTATTTGTGAAGGATTGCTTTATTAAGATTATTTCTAGCTGGTTGGTTGCTTCATTATTAGAATTTAATATCCTTATTTGATTTTCTTTTGCAGTTATTTTGAGAAGTACGGTGAAATAACAGATCTGTACATGCCAAAGGTTCCCCTGTCTCGTTGTGTCATTATTACTTTATATATGTGCTGTCATGTTCTGGCATTAAATCATATGATTCATTATGTACTAATTAATCTTACCCAATCTGCAGGATCCATCTACCAAGGGACATCGTGGAATTGGGTTTATTACTTTTGCAAATGCTGGTATGTCTCCCATCCTAATTTTTTGCAGTTTTTTCTTTATTTTCCAGGTATTTTCTGGCCACATTCAGTTATTCCTCTGCCTAATATCTAGTTATTGGGAACAGTTTTTTAATAAAACATAGGAACTTATTTTTTGGCAGGAATTGTATCTTGTAGGAACTTCCTGGGTAAATCCTATGTATCCATCTTATATTTCAGGGAGGGAAAACATTGAGTGTTGTAGTTGCAATGTTTTTCTCTGAAGGTGTCTTTAGTGCATTCACTCGGACAAGCGCTCAATTAGTGCAGTTAATTATTAAAATCTGGATCAATCAGTTTACCTTGATTCAGCATAAGTTCTTTTAATTTAATTGTTATAGATATGAAGATCTTCAACCTTTATGCATTAATCCATTACTCCAAGAAATTCACATTCTTGATATTGTAACATTTTTTGTCATTTTGGAATAACAGCTCACTGGTCAGGTGTTTAACCCGTGACCCAACAACGGTTAAAACAATTAGGAGGTTAATAATTTCCCCTTAATTCCACACTCTGTATATTGCCTCTCGGGGTGCTTATTTTGAGCCTGATAATGGGGTGATGATAAATGAATTTGACATTTGAAGAGTTTCTACTGTAGATCAGCATAATATTTGATTTGATCTCAGCCTTGATTCTTTCGCTAGTTATTTTGGTGTCAACTTGTATACCCCCACCCCATCCGAAACTGTTCCACTGGCAGTCTAGTTATACATTCTAGGTATTTTGATTGACATTCATCTTGTTTCTGGAATATAATTAACTAATAAAGTGTGTCTCTCTTAAGTGCACGCAGAGGTCCTGAGATCGAATCTCACCGCCACCCTATCAAAAAGAATTTCCATGTGCTTGGCCATGAAAAAGAATCAGGCCCGCACGTGAGGGGACGTGATGAGAGTAGAATTAACTAGTAAAAGTGCGTTCTCTCTAAAAATATTAAGCTTTTAGATTAGATGGTCACCCACTTCAACACATCTTTTATCACCTTTAGAAGTCTTGTAATTGTGCTGTCTCAGAAGAATCAGTTTCGTTTAATTTTTTCTAGGGATGTGGTAGCTACCACCTTGTTTTTATTTTTTCACCCAGGTAGAGGCAGGGAAGTTCCCTACATGCATGCCTATCATGTCTTCTGCAGACTCTAGTTTCTAGTCAGTTTTGTAATGATTTTCCTTTGAATTGAGTGGCTTTTGGTTTCTTTGCCCAGAATCAGTTGATGATCTGATGAGTGACACCCATGAACTGGGAGGTTCCACAATTGTGGTGGACCGAGCAACACCCAAGGCAAGTTATGCATAACCGAACTTTGATGTATCTCCAGTGATATATTCTAGATGTCATTGAAGTTCACACGTTCTGTGATGATTCATTAAATTTGCATTTTCTGCTGATGATTCTAGGAAGAAGATTTCAGACCTGTTAGTCGGATGTCTCAGAGTGGAGGAGGATATGGTGCATATAATGCATATATGAGTGCAACTACTAGATATGGTGCGCTTGGTGCTCCTACCTTATATGATCATCCTAGTTCTATGTATGGAAGTAAGTAAGCAACAATTCTTTTTTTTTATGACAAGGGAAACCCGCAGCCGCTACCCTTTGGGTGCGCACAGGGACTCCTATGCAATAGCTCGCAAACCACAAAAATGAACAGTAAATAATGACAAATATATCTTAAGCATGACACAACATCAATCATGCCTCTTATTTGACACAATTTTTTTACTAAGAGAATTTAATTAAATAAATCAGGAGGTGGAGGTGGAGGTGGAGGTGGAGGTGGAGGATTTCCATCTCGTGGTGGCTTGGGCCAGAAGATCTTTGTTGGTCGACTACCTCAAGAGGCAACAACTGAAGATCTTCGCCAGTATTTTGGTAGATTTGGCCGTGTTTTAGATGTGTATGTCCCAAAGGTAAAATTCTCTTATTTTCTTTCATTTTGGGGTAACAGATCTCGTCTCAAGTAACTTGGTAAATTGTTTAATTCTGTTATGATTGCGATGCTTATCTCCTGTAGGATCCAAGAAGACCAGGGCATAGAGGGTTTGGTTTTGTTACATTTGCTGATGATGGTGTTGCAGATCGTGTTTCTCGAAGGCCTCATGAGATATGTGGACATCAGGTATTTTTTGGGATTTTAGTAAAAAAAATATTTCCTTATCTTTTGTATCTCCCACCCCAATGAAATCTGTAGACCTTGAAGTATCAGTTGACCAGATTTTGAAATGAGACCATGGATGAGGAAAATCCATGGCCTGACGACTAAATGAGGGGAAATGCTTTCCACTCTAGAGCCACTTGATGGATGATATCTTAAAACTCCCTGGCTATTGCCTAGGATGTTCTGCTTACATTATAAGTTTGTTTGAAAGGTTAACTGTTTTTTGCAAAATTTAAATCTATTGAAACTGACCTGGCCATTTACCTGGATGTACTGCAATTCAGCCAATAGAACATTGTTGTGAAGATGATAAAGTTTCAACTGTTTGCTTGGCAAATGAAAATATACATTAATGTGAAGTTGGGTTTTAGGGAGTTTGAACTTTTACATGCTGAATTTTCACCCTCCTAAATGTAAAGCCAGCTTGGGCTACCCTTTTGGCTTCACTAATATCAGTGACCTTTCATGTTATGCTATGAGTAGTCTTATTCCTAGTTCTACCTTGCTTTTTTAGGTTGCAATTGATTCTGCTACTCCTCTTGATGATGCTGGTCCAAGTAACAATTACATGATGGATCCTCCTCCTCCTGCTCCTGAAGCATATGGGGGATATGGTGGTCCTATGCGTACTTATGGAAGGATGTATGGGGGCCTAGATTATGATGATGTAAGTATTTGAACCCTACTTAGCCAGTCAAATAACTTCAGTTGTCTTGTCTTTAACTTTGACCTCCACGATAGAATTGCTTTTATATTGTTAAACATCTATTGCCATGAAAGGCTTCCACCTTGACTGTTTCTTTGGGTGATTTTGAGCTTCCAATCCTCCCCTCTCCCACCAGAAAAATGGTCAATAACTGGACCTTCTTCCTGAGTCTTTCAGCTGTGGTTCTGACTTCTGCCTGGACAATAATTCAATTTGCTCTCTTTACTGACTGACCTATGCAATATGCACAACAATGCTATGTGATGCTTTTTATGTCAATGGAAGAAAACACTCATGTTTACGGCATCTTCCTATCTTTTCAGTGCGGTGATTCAACTAATGGAGTAATTTTTGTATTTTCATATTTACCATCCTCAAAAAGACAACAATTTATCATCATGCTTTATTCATACCTCTTTCCGGTTTTAGTTTTCTCCAAGTTTGTCTCACATGGATATTATGACCAGTCTGTTTATTGTTAGTCCTTAATTTAATAGATGAGAATTCTGGTGATAACCTTTAAATATGTGATTTTCTTCTGGTTCTGACAGTGGGGTTACGGCCTGGGTGGTGGGAGACCTTCAAGATCAGATATGAGATACAGGCCCTACTAGCTGGCCTGGTTGGATAGGAGGCGGTCAAGATCAGATATGAGATTCAGGCCCTAGTAGCTTTGTGTTGCAGGAGGTCAGAGGCTGTCTGAATTTCCAATGGGTGACAACAATAGATATGTCATATTTATATCAGTTTATTATTAGGTGGACATCATAATACATGTGCTACTAATACTTAAGTAATTGAAAAAGCAGTGCTGATGGATTGTGCAATTCACTTCATACTTGATCCTTTGTATTAAATGTATTGAAGAAACAAA-GAATGGGTGCTAATTCC-ATATCCAG-GAGTAGA</genome_strand>
        <mrna_strand>AAGAGCAGTGGCTTGGGGTTTGAAGGAGCTGAGCGGCGCGAGGAAGAGCGAGCGGAGCGGACTGAGAGAGCGAATTACGGTTTTGATAATCGGAATCAAGAAGGTCAGTGCAGCGCGTAAATCTAATTTAATACTCGTTGTGATTTTAATTTCTTTGGCATCCGAAGATCTTACAGAAATTGGTGAGTTTGTTCTGAAATATGATGATGATGATGATATTTGTGTGTGAGAAAGAGGTGTGTGTCTGTTACCTGCAGGAAGAATCGTCTTGTGTGAGCGATTCGTTTATAGAGAGAGGTGTGGTGAGATCGCGAGAGCGAGTTGAGTGTATATCCTACGATTTCCACTCTCCGCTAATCAATTTGTCAGACAAGTTTTCGTTACCATGTCGGAGAAGAAGCTTGTG..................................................................................GTTTTAGGCATCCCATGGGACGTGGATACAGAAGGTCTAAGGGAATATATGATCAAATATGGAGATTTAGAGGATTGTATTGTGATGAAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACGTGCTACTGGTCGTTCTCGTGGATTCGGCTATGTCACATTTGCTACAGTTGAGGATGCTAAG..................................................................................................................................................................................AATGCATTGTCTAAGGAGCACTTTCTTGGAAACAGAATGCTAGAAGTGAAAGTGGCGACACCGAAG............................................................................................................................................................................................................................................................................GAGGAGATGAGGGCTCCTGCAAAGAAAGTGACCAGGATTTTCGTTGCTAGGATTCCTCCGTCTGTGTCTGAAGCTACTTTCAGAGG..............................................................................................TTATTTTGAGAAGTACGGTGAAATAACAGATCTGTACATGCCAAAG..........................................................................................................GATCCATCTACCAAGGGACATCGTGGAATTGGGTTTATTACTTTTGCAAATGCTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCAGTTGATGATCTGATGAGTGACACCCATGAACTGGGAGGTTCCACAATTGTGGTGGACCGAGCAACACCCAAG....................................................................................................................GAAGAAGATTTCAGACCTGTTAGTCGGATGTCTCAGAGTGGAGGAGGATATGGTGCATATAATGCATATATGAGTGCAACTACTAGATATGGTGCGCTTGGTGCTCCTACCTTATATGATCATCCTAGTTCTATGTATGGAA..................................................................................................................................................................................................................GAGGTGGAGGTGGAGGTGGAGGTGGAGGTGGAGGATTTCCATCTCGTGGTGGCTTGGGCCAGAAGATCTTTGTTGGTCGACTACCTCAAGAGGCAACAACTGAAGATCTTCGCCAGTATTTTGGTAGATTTGGCCGTGTTTTAGATGTGTATGTCCCAAAG........................................................................................................GATCCAAGAAGACCAGGGCATAGAGGGTTTGGTTTTGTTACATTTGCTGATGATGGTGTTGCAGATCGTGTTTCTCGAAGGCCTCATGAGATATGTGGACATCAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCAATTGATTCTGCTACTCCTCTTGATGATGCTGGTCCAAGTAACAATTACATGATGGATCCTCCTCCTCCTGCTCCTGAAGCATATGGGGGATATGGTGGTCCTATGCGTACTTATGGAAGGATGTATGGGGGCCTAGATTATGATGAT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGGTTACGGCCTGGGTGGTGGGAGACCTTCAAGATCAGATATGAGATACAGGCCCTACTAGCTGGCCTGGTTGGATAGGAGGCGGTCAAGATCAGATATGAGATTCAGGCCCTAGTAGCTTTGTGTTGCAGGAGGTCAGAGGCTGTCTGAATTTCCAATGGGTGACAACAATAGATATGTCATATTTATATCAGTTTATTATTAGGTGGACATCATAATACATGTGCTACTAATACTTAAGTAATTGAAAAAGCAGTGCTGATGGATTGTGCAATTCACTTCATACTTGATCCTTTGTATTAAATGTATTGAAGAAACAAAGGAATGGGTGCTAATTCCTATATCCAGAAAGTAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0012A12-ClXVT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U570150" ref_strand="+" ref_description="SGN-U570150 Tomato 200607#2 [2 ESTs aligned] ">
      <seq>aggcataaaacataatttgctatattgcttcactaccaactatgtttctactcctggatatggaattagcacccattctttggttcttcaatacatttaatacaaaggaccaagtttgaagtgaattgcacaatccatcaacactgctttttcaattacctaagttttagcagcacatgtattatgatggccacctaataataaactgatataaatatgacatatctattggtgtcacccattggaaattcaaaccggctttgacctcctggaacacaaagctactagggcccgaatctatatctgatcttgac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0012A12-ClXVT/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0012A12.1" temp_strand="-" temp_description="C02HBa0012A12.1  AC215355.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0012A12 sequenced_by:kribb upload_account_name:korea">
        <position start="9964" stop="9050"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="9664" g_stop="9350" g_length="315"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="314" r_length="314" r_score="0.946"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0012A12.1" gen_strand="-" ref_id="SGN-U570150" ref_strand="+">
        <total_alignment_score>0.946</total_alignment_score>
        <cumulative_length_of_scored_exons>315</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0012A12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U570150" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="9664" e_stop="9350"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGTATAAAACATAATTTGCTATATTGCTTCACTACCAACTATGTTTCTACTCCTGGATATGGAATTAGCACCCATTCTTTGTTTCTTCAATACATTTAATACAAAGGATCAAGTATGAAGTGAATTGCACAATCCATCAGCACTGCTTTTTCAATTACTTAAGTATTAGTAGCACATGTATTATGATGTCCACCTAATAATAAACTGATATAAATATGACATATCTATTGTTGTCACCCATTGGAAATTCAGACAGCCTCTGACCTCCTGCAACACAAAGCTACTAGGGCCTGAATCTCATATCTGATCTTGAC</genome_strand>
        <mrna_strand>AGGCATAAAACATAATTTGCTATATTGCTTCACTACCAACTATGTTTCTACTCCTGGATATGGAATTAGCACCCATTCTTTGGTTCTTCAATACATTTAATACAAAGGACCAAGTTTGAAGTGAATTGCACAATCCATCAACACTGCTTTTTCAATTACCTAAGTTTTAGCAGCACATGTATTATGATGGCCACCTAATAATAAACTGATATAAATATGACATATCTATTGGTGTCACCCATTGGAAATTCAAACCGGCTTTGACCTCCTGGAACACAAAGCTACTAGGGCCCGAATCT-ATATCTGATCTTGAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0012A12-ClXVT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U562963" ref_strand="-" ref_description="SGN-U562963 Tomato 200607#2 [8 ESTs aligned] (*GB) gi|157345125|emb|CAO71853.1| (e_value=7e-85) unnamed; (*ATH) AT4G36970.1 (e_value=2e-52) | Symbol: None | remorin family protein, contains Pfam domain, PF03763: Remorin, C-terminal region | chr4:17429739-17431680 REVERSE | Aliases: AP22.30, AP22_30; ">
      <seq>ggagcaccacaactcaaagttggtaaaagcctgaactcttctgcattagcagtagttaaagggttattgttccaagatttatgtggcatgcaatttgccattattgagaatcatgaagcagaattctacttccttgaggaattcgggtttatatacaagcccagcaacaccagaatatggagataataatgttagaggatttcagaagggatggagttctgaacgagtcccgttgccgactaacagcggcaggaggcatattagtactactgcattgatgcctttcaatagtggaaggacagtgccttcaaaatgggatgatgctgaaaggtggattactagcccagtgtttagttatggtgtttggaggactccaaacgcacaaacctacaggggccccaagtctaaaagtggacctcttgggccacctggcctaatgtatttaccgaactattcgccctctatgccagtccttgaaagtggaggtataagtaacttcattgcaaattcaccatttacaactggtgtactggtgcctgatggggtatccattcattatggtgctggtgaatatgctcagaatagtatggctcgagcaaccagtgctcccggtctgtcagatttgttcagtgaatcttcagtaccaagctctccagatgatgtcacaaaggagccagattctatttcctttgcagttttgaggagagacatggcaacacaaatgagctctgatgacagtacacatacatctccccaggaaaggtcatcttcaatccctcctggagtggagcagagcaggcagcattccactaaagtcgagattagagacgtgcaggttgacaaaggagacccaattttagggctatctcggaaaagccgggtgaggaaacccaagaaacaattaccagacataagttcgcctatctcaacgtgggatgttgtagatggaacaaagagtatgacaaagtcgcaaagagaggaagccaggatcgctgcttgggagaacttgcagaaggccaaagcagaagcagaaatccaaaagcttgagatgaaactagaaaagaggaggtcagcatccatggataagattctgaacaagcttagacacgctcaggtgaaggcccaaaatatgagacgtgcaacttcggagagtcagcctagaagggattcccacagaatcattccatttcgggagtatttcaagattacatcatttagcagttgctttgtttgccgtatcccttgattttgtgtacaggcatgaggctttctgaagtaaaattcaagtc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0012A12-ClXVT/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0012A12.1" temp_strand="-" temp_description="C02HBa0012A12.1  AC215355.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0012A12 sequenced_by:kribb upload_account_name:korea">
        <position start="13503" stop="9852"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="13204" g_stop="13144" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="61" r_length="61" r_score="0.984"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="13143" i_stop="12469" i_length="675">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="12468" g_stop="11874" g_length="595"/>
          <reference_exon_boundary r_type="cDNA" r_start="62" r_stop="656" r_length="595" r_score="0.997"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="11873" i_stop="11172" i_length="702">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="11171" g_stop="10862" g_length="310"/>
          <reference_exon_boundary r_type="cDNA" r_start="657" r_stop="966" r_length="310" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="10861" i_stop="10563" i_length="299">
            <donor d_prob="0.934" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="10562" g_stop="10481" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="967" r_stop="1048" r_length="82" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="10480" i_stop="10393" i_length="88">
            <donor d_prob="0.844" d_score="1.00"/>
            <acceptor a_prob="0.876" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="10392" g_stop="10152" g_length="241"/>
          <reference_exon_boundary r_type="cDNA" r_start="1049" r_stop="1289" r_length="241" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0012A12.1" gen_strand="-" ref_id="SGN-U562963" ref_strand="-">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>1289</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0012A12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U562963" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="13204" e_stop="13144"/>
          <exon e_start="12468" e_stop="11874"/>
          <exon e_start="11171" e_stop="10862"/>
          <exon e_start="10562" e_stop="10481"/>
          <exon e_start="10392" e_stop="10152"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAGCACCACAACTCAAAGTTGGTAAAAGCCTGAACTCTTCTGCATTAGCAGTAGTTAAAGGTAAAAGCTTCACTTAATCAACATTTATTTGCTGTAAAAGTTTGAAACTTGTTGTGCTTTTTTGCTTCTCCCCCCACTTTTCTCATCCTTTTTCAGGGGTCCTGAATGCAACATGCACTTTTTTACTTTTTAACTTTGTATAATTGAGGTATATAACTGGTAATAGGAATAACCAACTTTCTTGCTGATTGCTTCTTTCTACTTCTTCCTCTGCCCTTCTGGGGACGGAAGATACTGTTGATTAAATTTAGGGGGCTTCAAATCTTCTTGTGTTTATTAGATTTAGGGAAAAATGGGAGGGGATAACAACTTGAGAATCGAACGCTAGCCAACAAGATAGAAGTTTAGATAGTCAACTAATTGAACGAGCTACTGAATAAAAATTTGTTCAGGTGTCAACTTTCTTTTGAATCTACTAGTAATAAATTTATTCCACTACTGGCAATATTTGGCCATTTTAACTTTTCCAGTGGTCCTGACTTTGTGATGACTGTAACCTCTAAATTACTTAATTGCCACAAATTTCAAGATTTTTGAGAGTAATTCTGTGTTGCTCAAGACAAAATGAGGACATACCTGGATAGCATTTTTTTAATTTTGGATGTATAGTGGTGGTGTGATAGTAAAAAGCCTAGTTTAGATTTATGGTCTTTAATGTTCTAACCAATTGGATAGGGTTATTGTTCCAAGATTTATGTGGCATGCAATTTGCCATTATTGAGAATCATGAAGCAGAATTCTACTTCCTTGAGGAATTCGGGTTTATATACAAGCCCAGCAACACCAGAATATGGAGATAATAATGTTAGAGGATTTCAGAAGGGATGGAGTTCTGAACGAGTCCCGTTGCCGACTAACAGCGGCAGGAGGCATATTAGTACTACTGCATTGATGCCTTTCAATAGTGGAAGGACAGTGCCTTCAAAATGGGATGATGCTGAAAGGTGGATTACTAGCCCAGTGTCAAGTTATGGTGTTTGGAGGACTCCAAACGCACAAACCTACAGGGGCCCCAAGTCTAAAAGTGGACCTCTTGGGCCACCTGGCCTAATGTATTTACCGAACTATTCGCCCTCTATGCCAGTCCTTGAAAGTGGAGGTATAAGTAACTTCATTGCAAATTCACCATTTACAACTGGTGTACTGGTGCCTGATGGGGTATCCATTCATTATGGTGCTGGTGAATATGCTCAGAATAGTATGGCTCGAGCAACCAGTGCTCCCGGTCTGTCAGATTTGTTCAGTGAATCTTCAGTACCAAGCTCTCCAGGTATGCATTTCTTCCGTTGCCTGCTTTGTACTGGTTGTCATAGCGCGAGAGAAGCACTAACCTAATTCTGGTGAATCTTAATTTGTTGTCACTTCAGTTCTTGCAAAAGAAGGTCTCAACGGTCCTACTGTCTCTATATCAGGTTTAAATGTATTATTTAAGTCAACTTAGCTATAGAGTCTTAAGACACTTGAAATGTGGAAGTTGTAGCCTGCAGATTAAGAATTGGGATCGGGAATAACTAATAGCTAAGACACGGATCTTGAATTTGATGAGAAACCCAGCTAAAACAGAAGTTTAATCGAAGTTCAGTGACTGTCCTCCTAAGTTTTAGCAATTGATGATGGCAATATCTCATGTAACACAAGATCCAAGTGTTGAGGACTTCCTATCATATGAATCTACACTTATGTGCTACATGACGGATGAAAAAGCAGTATGCAATTGTATAAACTGATTTAGATGAATAATCATCTTGTTATGCTAGGATTGCAAGTAGTGTTGGTTCATCTTAAAAAATATGACTTTGATGCTTCTTAACTACACTCAGGCCATTTGTTTGAAGTTTGTTAAGCATCAAGTTTACCAGCAAAAGGCCATTGTTCAGTTATGAAACGATTTTTGAGAGAGAAAGATATGTCTTTAGTAAAGTACACCACTATAATTTAATGATATTCTGTTGTTGATGAATCCAATGAACAGATGATGTCACAAAGGAGCCAGATTCTATTTCCTTTGCAGTTTTGAGGAGAGACATGGCAACACAAATGAGCTCTGATGACAGTACACATACATCTCCCCAGGAAAGGTCATCTTCAATCCCTCCTGGAGTGGAGCAGAGCAGGCAGCATTCCACTAAAGTCGAGATTAGAGACGTGCAGGTTGACAAAGGAGACCCAATTTTAGGGCTATCTCGGAAAAGCCGGGTGAGGAAACCCAAGAAACAATTACCAGACATAAGTTCGCCTATCTCAACGTGGGATGTTGTAGATGGAACAAAGAGTATGACAAAGTAAGCATGCATTTCCGGCTTGTTTTTGCTTCTTATGTTTGCTAATGCAGCTATCTTGTCCTTCCATACAAATATTCCACATTTTCAAGGGAACTGACATGCCCTTATGTGTAACTCCACAAGTTTGTAGAAACTATTTGGGCCAAGTAGCGAAATACACAACCTTCACCTCACTGCTAGATTCACAAATAAAAGATTGATGGACATTCTTTTGGCAATACATATGTATACTTATAGTAGGTGCATTTGTCAAGGAGCAAAAATACTATATATGAATAACGGTTGTGCATTTTGTGAAGGTCGCAAAGAGAGGAAGCCAGGATCGCTGCTTGGGAGAACTTGCAGAAGGCCAAAGCAGAAGCAGAAATCCAAAAGCTTGAGGTTCGTTAGACATATATCCAGACACTGATACTTGTTTGAAAGAATAGGACGAGCATAAAAGAAGACTTAACTATTATTTGCATTTCAGATGAAACTAGAAAAGAGGAGGTCAGCATCCATGGATAAGATTCTGAACAAGCTTAGACACGCTCAGGTGAAGGCCCAAAATATGAGACGTGCAACTTCGGAGAGTCAGCCTAGAAGGGATTCCCACAGAATCATTCCATTTCGGGAGTATTTCAAGATTACATCATTTAGCAGTTGCTTTGTTTGCCGTATCCCTTGATTTTGTGTACAGGCATGAGGCTTTCTGAAGTAAAATTCAAGTC</genome_strand>
        <mrna_strand>GGAGCACCACAACTCAAAGTTGGTAAAAGCCTGAACTCTTCTGCATTAGCAGTAGTTAAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTATTGTTCCAAGATTTATGTGGCATGCAATTTGCCATTATTGAGAATCATGAAGCAGAATTCTACTTCCTTGAGGAATTCGGGTTTATATACAAGCCCAGCAACACCAGAATATGGAGATAATAATGTTAGAGGATTTCAGAAGGGATGGAGTTCTGAACGAGTCCCGTTGCCGACTAACAGCGGCAGGAGGCATATTAGTACTACTGCATTGATGCCTTTCAATAGTGGAAGGACAGTGCCTTCAAAATGGGATGATGCTGAAAGGTGGATTACTAGCCCAGTGTTTAGTTATGGTGTTTGGAGGACTCCAAACGCACAAACCTACAGGGGCCCCAAGTCTAAAAGTGGACCTCTTGGGCCACCTGGCCTAATGTATTTACCGAACTATTCGCCCTCTATGCCAGTCCTTGAAAGTGGAGGTATAAGTAACTTCATTGCAAATTCACCATTTACAACTGGTGTACTGGTGCCTGATGGGGTATCCATTCATTATGGTGCTGGTGAATATGCTCAGAATAGTATGGCTCGAGCAACCAGTGCTCCCGGTCTGTCAGATTTGTTCAGTGAATCTTCAGTACCAAGCTCTCCAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGATGTCACAAAGGAGCCAGATTCTATTTCCTTTGCAGTTTTGAGGAGAGACATGGCAACACAAATGAGCTCTGATGACAGTACACATACATCTCCCCAGGAAAGGTCATCTTCAATCCCTCCTGGAGTGGAGCAGAGCAGGCAGCATTCCACTAAAGTCGAGATTAGAGACGTGCAGGTTGACAAAGGAGACCCAATTTTAGGGCTATCTCGGAAAAGCCGGGTGAGGAAACCCAAGAAACAATTACCAGACATAAGTTCGCCTATCTCAACGTGGGATGTTGTAGATGGAACAAAGAGTATGACAAA...........................................................................................................................................................................................................................................................................................................GTCGCAAAGAGAGGAAGCCAGGATCGCTGCTTGGGAGAACTTGCAGAAGGCCAAAGCAGAAGCAGAAATCCAAAAGCTTGAG........................................................................................ATGAAACTAGAAAAGAGGAGGTCAGCATCCATGGATAAGATTCTGAACAAGCTTAGACACGCTCAGGTGAAGGCCCAAAATATGAGACGTGCAACTTCGGAGAGTCAGCCTAGAAGGGATTCCCACAGAATCATTCCATTTCGGGAGTATTTCAAGATTACATCATTTAGCAGTTGCTTTGTTTGCCGTATCCCTTGATTTTGTGTACAGGCATGAGGCTTTCTGAAGTAAAATTCAAGTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0012A12-ClXVT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U569421" ref_strand="+" ref_description="SGN-U569421 Tomato 200607#2 [13 ESTs aligned] (*GB) gi|148053196|gb|ABQ52698.1| (e_value=0) zeaxanthin; (*ATH) AT5G67030.1 (e_value=0)  Symbol: None | zeaxanthin epoxidase (ZEP) (ABA1), identical to GI:9857296 AtABA1; controls Pfam profiles PF01360: Monooxygenase and PF00498: FHA domain; identical to cDNA AtABA1, GI:9857295 | chr5:26770748-26774462 REVERSE | Aliases: K8A10.10, K8A10... ; (*SWP) sp|P93236|ABA2_SOLLC (e_value=0) Zeaxanthin epoxidase, chloroplastic OS=Solanum lycopersicum; ">
      <seq>atatattacttgtttggatatcaatcttccttgccccaccaccatcctcactttaacccacaaatcccactttctttggcctaattaacaattttttcaataaatcttcttttcactgaatcatacatacattggaagaaaaactcaaatcttcttttcttgaactggggttcaattaaaagatgtattcaactgttttttacacttcagtgcatccttccacttcagttttatcaagaaagcagctacctttattgatttccaaggacttttctgcagagttatatcattctttaccttgtaggagcttggaaaatgggcatatcaacaaggttaaaggagtaaaagtaaaagcaacaattgctgaagctccagttactcctacagagaagactgactctggggctaacggtgatttgaaggttccacagaagaagttgaaagtacttgttgcgggtggtgggattggtgggttagtgtttgctttggcagcaaagaaaagggggtttgatgtattggtgtttgagagggatttaagtgctatcagaggagagggacaatatagaggtccaatacagatacagagcaatgcattggctgctttagaagcaattgatttggatgttgctgaagacattatgaatgctggctgcatcactggtcaaaggattaatggcttggttgatggtatttctggcaactggtattgcaagtttgatacgttcactccagcagtggaacgtggacttccagtgacaagagttatcagtcgcatgactttgcagcagatccttgcacgtgctgttggtgaggagataattatgaatgaaagtaatgttgtagactttgaggatgatggagagaaggttactgtggttcttgagaatggacaacgatttacaggtgatcttctggttggtgctgatggcataagatctaaggtacggactaatttattcggacccagtgaagctacttactctggctacacttgttatactggaattgcagatttcgttccagctgatattgatacagttgggtaccgcgtctttttgggccacaaacagtactttgtttcttcagatgtggggggaggcaagatgcagtggtatgcattttacaatgaaccagctggtggtgcggatgccccaaacggtaaaaaggaaagattgcttaaaatatttgggggatggtgtgacaatgttatagacctattagttgccacagatgaagatgcaattcttcgtcgtgacatctatgatagaccgccaacctttagttggggaagaggtcgtgttacattgcttggggactccgtccatgccatgcagcctaatttgggtcaagggggatgcatggccatagaggatagctatcaactagcactggaacttgaaaaagcatgcagtcgaagtgcagagtctggaagccctgtggatatcatctcatctttaaggagctatgaaagtgctagaaaacttcgagttggagtcatccatggactggctagaatggctgcaatcatggcatctacttacaaggcttatcttggcgtcggacttggtccactatcatttttgacgcagtatagaataccacatcctggaagagttggtggaagagtttttattgacttgggaatgcctctgatgttaagttgggttctaggaggcaatggggacaagcttgaaggcagaataaaacattgcaggctatctgagaaagcaaatgaccaattgagaaaatggtttgaagatgatgatgctttagagcgtgctactgatgcagagtggttacttttacctgcggggaatggctcttctggtttagaagctattgttttaagcagagatgaggatgtcccttgcactgtcgggtccatctcacatacaaatattcctggaaaatcaatagttttacctttgccacaggtatctgaaatgcacgcccggatatcatgcaaagacggagcattttttgtaactgatttacgaagtgaacatggtacctgggttacagataatgaaggcagaagatatcggacgtctccaaacttccctacacgttttcatccatcagatgttatcgaatttggttctgataaggcagcatttcgtgttaaagcaatgaaatttccactaaaaacttctgaaaggaaggaagagcgcgaagcagtggaggcagcgtaaagcttgacctgatataaacaggaaattgtacagcattttatagcaaacatcaggcgttgagcaatttaagcatagttaattttgtatactgtaggttttagaaaagatccataaacaagacaccatgaaagaaaatacagagattctcctaaagaaatctggagaatgtcatggacattgtctcttattctaccattgctaaaaatatattacttctctatgtat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0012A12-ClXVT/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0012A12.1" temp_strand="+" temp_description="C02HBa0012A12.1  AC215355.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0012A12 sequenced_by:kribb upload_account_name:korea">
        <position start="20429" stop="26519"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20729" g_stop="21431" g_length="703"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="703" r_length="703" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="21432" i_stop="21869" i_length="438">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.980" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="21870" g_stop="22032" g_length="163"/>
          <reference_exon_boundary r_type="cDNA" r_start="704" r_stop="866" r_length="163" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="22033" i_stop="22185" i_length="153">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="22186" g_stop="22260" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="867" r_stop="941" r_length="75" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="22261" i_stop="22429" i_length="169">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.978" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="22430" g_stop="22530" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="942" r_stop="1042" r_length="101" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="22531" i_stop="22645" i_length="115">
            <donor d_prob="0.954" d_score="1.00"/>
            <acceptor a_prob="0.751" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="22646" g_stop="22761" g_length="116"/>
          <reference_exon_boundary r_type="cDNA" r_start="1043" r_stop="1158" r_length="116" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="22762" i_stop="23348" i_length="587">
            <donor d_prob="0.731" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="23349" g_stop="23560" g_length="212"/>
          <reference_exon_boundary r_type="cDNA" r_start="1159" r_stop="1370" r_length="212" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="23561" i_stop="23713" i_length="153">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="23714" g_stop="23805" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="1371" r_stop="1462" r_length="92" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="23806" i_stop="24022" i_length="217">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="24023" g_stop="24137" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="1463" r_stop="1577" r_length="115" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="24138" i_stop="24238" i_length="101">
            <donor d_prob="0.895" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="24239" g_stop="24342" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="1578" r_stop="1681" r_length="104" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="24343" i_stop="24701" i_length="359">
            <donor d_prob="0.085" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="24702" g_stop="24747" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="1682" r_stop="1727" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="24748" i_stop="24857" i_length="110">
            <donor d_prob="0.972" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="24858" g_stop="24922" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="1728" r_stop="1792" r_length="65" r_score="1.000"/>
        </exon>
        <intron i_serial="11">
          <gDNA_intron_boundary i_start="24923" i_stop="25021" i_length="99">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="12">
          <gDNA_exon_boundary g_start="25022" g_stop="25108" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="1793" r_stop="1879" r_length="87" r_score="1.000"/>
        </exon>
        <intron i_serial="12">
          <gDNA_intron_boundary i_start="25109" i_stop="25423" i_length="315">
            <donor d_prob="0.914" d_score="1.00"/>
            <acceptor a_prob="0.683" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="13">
          <gDNA_exon_boundary g_start="25424" g_stop="25478" g_length="55"/>
          <reference_exon_boundary r_type="cDNA" r_start="1880" r_stop="1934" r_length="55" r_score="1.000"/>
        </exon>
        <intron i_serial="13">
          <gDNA_intron_boundary i_start="25479" i_stop="25568" i_length="90">
            <donor d_prob="0.894" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="14">
          <gDNA_exon_boundary g_start="25569" g_stop="25657" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="1935" r_stop="2023" r_length="89" r_score="1.000"/>
        </exon>
        <intron i_serial="14">
          <gDNA_intron_boundary i_start="25658" i_stop="25748" i_length="91">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.547" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="15">
          <gDNA_exon_boundary g_start="25749" g_stop="25833" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="2024" r_stop="2108" r_length="85" r_score="1.000"/>
        </exon>
        <intron i_serial="15">
          <gDNA_intron_boundary i_start="25834" i_stop="25910" i_length="77">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.925" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="16">
          <gDNA_exon_boundary g_start="25911" g_stop="26219" g_length="309"/>
          <reference_exon_boundary r_type="cDNA" r_start="2109" r_stop="2417" r_length="309" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0012A12.1" gen_strand="+" ref_id="SGN-U569421" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>2417</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0012A12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U569421" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20729" e_stop="21431"/>
          <exon e_start="21870" e_stop="22032"/>
          <exon e_start="22186" e_stop="22260"/>
          <exon e_start="22430" e_stop="22530"/>
          <exon e_start="22646" e_stop="22761"/>
          <exon e_start="23349" e_stop="23560"/>
          <exon e_start="23714" e_stop="23805"/>
          <exon e_start="24023" e_stop="24137"/>
          <exon e_start="24239" e_stop="24342"/>
          <exon e_start="24702" e_stop="24747"/>
          <exon e_start="24858" e_stop="24922"/>
          <exon e_start="25022" e_stop="25108"/>
          <exon e_start="25424" e_stop="25478"/>
          <exon e_start="25569" e_stop="25657"/>
          <exon e_start="25749" e_stop="25833"/>
          <exon e_start="25911" e_stop="26219"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATATATTACTTGTTTGGATATCAATCTTCCTTGCCCCACCACCATCCTCACTTTAACCCACAAATCCCACTTTCTTTGGCCTAATTAACAATTTTTTCAATAAATCTTCTTTTCACTGAATCATACATACATTGGAAGAAAAACTCAAATCTTCTTTTCTTGAACTGGGGTTCAATTAAAAGATGTATTCAACTGTTTTTTACACTTCAGTGCATCCTTCCACTTCAGTTTTATCAAGAAAGCAGCTACCTTTATTGATTTCCAAGGACTTTTCTGCAGAGTTATATCATTCTTTACCTTGTAGGAGCTTGGAAAATGGGCATATCAACAAGGTTAAAGGAGTAAAAGTAAAAGCAACAATTGCTGAAGCTCCAGTTACTCCTACAGAGAAGACTGACTCTGGGGCTAACGGTGATTTGAAGGTTCCACAGAAGAAGTTGAAAGTACTTGTTGCGGGTGGTGGGATTGGTGGGTTAGTGTTTGCTTTGGCAGCAAAGAAAAGGGGGTTTGATGTATTGGTGTTTGAGAGGGATTTAAGTGCTATCAGAGGAGAGGGACAATATAGAGGTCCAATACAGATACAGAGCAATGCATTGGCTGCTTTAGAAGCAATTGATTTGGATGTTGCTGAAGACATTATGAATGCTGGCTGCATCACTGGTCAAAGGATTAATGGCTTGGTTGATGGTATTTCTGGCAACTGGTAAATTCACATCACTATGATTTCTTTGTGCTAATTAGGTGCTTGTTTATGCTTTACTCTGATATGTTTTACTTGAGTCGACATCAAAAGTTAGGGATACCACCCTCCTCAGAACCCACTCGTGTGCTTGTCCGAAGAGAAACTCTTGGTGTTATTTAACAGTAACAATCATACACAAGCTTTTACTAAGGATAACTGAAGAAGATAATGAAATACTTAAGTCTTTCAGAAAATTATACTGAAATTATTTGAGGGAAAATAATTCATTTAGTGAAAAGTTTATTGAGTCATAGTTGTTGAGCTTATTCCGGAAAAGGATCCATATTTACCTGCAATCAGATTGGTGAATTGGTCTCGTTATTGTATGAACAGCTTTATTATGAGAACAGTTCCTTTTTAGTTCTTGAACTGCACACAGTGACAATAGTTGGTTTTCAGGTATTGCAAGTTTGATACGTTCACTCCAGCAGTGGAACGTGGACTTCCAGTGACAAGAGTTATCAGTCGCATGACTTTGCAGCAGATCCTTGCACGTGCTGTTGGTGAGGAGATAATTATGAATGAAAGTAATGTTGTAGACTTTGAGGATGATGGAGAGAAGGTATCTGGCTATTTCCAAAACTCAAAATATCAAGAAAGATTAGAACTTCTGTTAGTTTCATTTAAGATTGTGTCGATCAGTGTCAATGGTAGCTAATTGTTGTGTCTTATTAATCAATTTTCATTATAGCTTCTCATGTTTGTGTGAAATCAGGTTACTGTGGTTCTTGAGAATGGACAACGATTTACAGGTGATCTTCTGGTTGGTGCTGATGGCATAAGATCTAAGGTATTCAAAATCAGTCTCATTCTATTTCCTTCTAATATTGCTACTTGTGTTGATTACAAGGATAGAGTAACTTGTCCATATGTTACTTTGAGATTGTGGTCCATGTTAAAAAAGTAGTTGGTCAATTCGGCTTGGTTTAGAAGATCTCAAACATTGGTGTTTATTGTAGGTACGGACTAATTTATTCGGACCCAGTGAAGCTACTTACTCTGGCTACACTTGTTATACTGGAATTGCAGATTTCGTTCCAGCTGATATTGATACAGTTGGGTATGATATTCTTACTTATCGGATTGTCTTTTCCCTCTTCATGTCCTTAGCTGGTCCCCTTATGCTCATGCTATGTTGTCATAGTAAAGGTTAAATTCAGATTTCTTTTCTGAAGGTACCGCGTCTTTTTGGGCCACAAACAGTACTTTGTTTCTTCAGATGTGGGGGGAGGCAAGATGCAGTGGTATGCATTTTACAATGAACCAGCTGGTGGTGCGGATGCCCCAAACGGTAAGAGTTTTTAGGCCGTTTGTAGTTCAGGATATAAACGTGCTTACTAGAAGACGTTTCTGAATGCTTGACTTGTTAAGTAATGTCTATATAACCCAAGGGGTTTCTCGAGGATTTTTCCTTGTTGAGACCTGATTATAGTGCTGCAATAAGGTAAAGAAGAAGTCAAGATTAGAATGAGATAGATTCAATGAATTGTGAGTTGGAAAGTTTTGAATTGAAGTGCTGATTCATGCATAATCTAACTTTTGGTAAGCAGTTGCACTCTTACTCATCTAATTCATTTCTGAAGAGTTTCAGAGAATGATGCACCACAATTCTTTGTTTCTACTCATAGATGTGAGGTCCTTACTTCATCACAGAAATTGTTTATTAACTTGTATATGAAACGCATGTCTTATTATATTGTTGTAGTAGTACCAGTTTGGATAAAAGAATCACAAACTTTTGGGGGGTTGGCACTACATGAGATGAGTATGGTATCTTGACACTCTAAATTGCCACTATGATGCTCAAGAGGTTAGGAAATATATGTAGTCATATTGTCATTACATTGGTTGTCAATAGTTTATCTGTTCATGCTGCAGGTAAAAAGGAAAGATTGCTTAAAATATTTGGGGGATGGTGTGACAATGTTATAGACCTATTAGTTGCCACAGATGAAGATGCAATTCTTCGTCGTGACATCTATGATAGACCGCCAACCTTTAGTTGGGGAAGAGGTCGTGTTACATTGCTTGGGGACTCCGTCCATGCCATGCAGCCTAATTTGGGTCAAGGGGGATGCATGGCCATAGAGGTACATTCTTTATAGTAACCTTTTTTACTTCACTTAATTAACATGGTATTATTGGTCGATTCTATCCCTTAGTCCCTTCTATCTAAGAACTAAGAAGTAGGGTATTATTGTTATGTTGTGTAAGCCACTGAACGTTTCCTTTTACAACTACAGGATAGCTATCAACTAGCACTGGAACTTGAAAAAGCATGCAGTCGAAGTGCAGAGTCTGGAAGCCCTGTGGATATCATCTCATCTTTAAGGAGGTAATCCATTATTTATTGGCTCAAGTGATGTATAGTGGTTGCTTGAATACACGCTGTTTGACAATTGAAAAGTCATTTAAAATTGGCTGAAGTCTTAACTTCACCTTACCACCAGCCAAGAAAGCCTGCTTTAAATGCCTAAATGAAGATGAATTGACTTGAACAACTTCTGTTTCTGCCAGTTAGCTGATCCTTTTATGATTTTCTGTATCCACAGCTATGAAAGTGCTAGAAAACTTCGAGTTGGAGTCATCCATGGACTGGCTAGAATGGCTGCAATCATGGCATCTACTTACAAGGCTTATCTTGGCGTCGGACTTGGTCCACTATCAGTATGGAAATCTGTCTCTCTTTGAAATATGAGTAGCTAAGTTGTCTGATTTAGCATAGATCTTCTTATGATATGGATTTGGATTTCTATCATTTTTTGCAGTTTTTGACGCAGTATAGAATACCACATCCTGGAAGAGTTGGTGGAAGAGTTTTTATTGACTTGGGAATGCCTCTGATGTTAAGTTGGGTTCTAGGAGGCAATGGGTAGGGAATATGCAGGCCTTTTCTTGGTTCAATATTTTAAACATGAACTTGATTTTACTTATGTGATCAGCCTATAGCTAGAGAGTGAAATTGCAAAGCCATATATTTATTTTTACTTCTAATGCTTCTTGCGGTGAACCCTTCCTTTTATCACAGTTCAATGGTTCATGATTATTCTGTTGATTCTGTTTAGTCGGAACTTTTACTCGAAATTCTTTTATTGTACCTAAGCTTCAAATTATTAGTTCTTTTTTGTTCGGAAAAATTAGAAGTTGAGCTTTCCCTCATCCTTGATGAGTTCAATGGATTCTTGGAAGTTGATAAACTAGTAGTTTGACTCGGCTTTTTTTTTCTTGCAGGGACAAGCTTGAAGGCAGAATAAAACATTGCAGGCTATCTGAGAAAGTATGTAGACTAAGGAATTATGCACATAAAAAATTGTGGTTTCCATTGTTACATAATTAACAAGTATGAATTTTATGGGAGTATTAATACACTGTATTGTGGTAATGAAGGCAAATGACCAATTGAGAAAATGGTTTGAAGATGATGATGCTTTAGAGCGTGCTACTGATGCAGAGTGAGTTTGACAAGCTTAATCTTTACAAATTTCATTTATATGTATGTCCTGTTTTTCTTGTTTGCTTGCTAATTTTGATGCTTAATTTTTATCTTTCAGGTGGTTACTTTTACCTGCGGGGAATGGCTCTTCTGGTTTAGAAGCTATTGTTTTAAGCAGAGATGAGGATGTCCCTTGCACTGTCGGGTATGCTTTTAGGTTATGGTTTATTGGATTTAAGATTGTTCATAGCTGACTGTTACGTCTTTGTGGCACATAGTTTAAAAGATTTAAATAGTTCAAGTCATTTTATTACTTAGCTCTCGACATAATCATACACTATGGTGTGCATCAGTTGCAAATATTTCACCATCAATCTCCTCTAATTTACACATCCAATCCATGCACATACTTTCAAAACTGTGAACCAGACAAAAAATGAATTTCACTTGGCTGTAAAGGGAGAATGTATAACGCAATATTGTTTTATTAGAATAGTCACTGACAGGCTTTTGGTTTCAGGTCCATCTCACATACAAATATTCCTGGAAAATCAATAGTTTTACCTTTGCCACAGGTGATTGCCATATTATTCTATAGCTCAGTATCCTGGACCTTCTTCTGGTGAATGCATGATTGAATTGTCAAATTTCTTTTTTAATCTCAGGTATCTGAAATGCACGCCCGGATATCATGCAAAGACGGAGCATTTTTTGTAACTGATTTACGAAGTGAACATGGTACCTGGGTTACAGAGTAAGTTCCATGTGTTCCTGTATACAACTCTACTATTAGATATCCCATTTTATGAAAACAATAGTTACGATTGATCTGCGTTATCATGTAGTAATGAAGGCAGAAGATATCGGACGTCTCCAAACTTCCCTACACGTTTTCATCCATCAGATGTTATCGAATTTGGTTCTGATAAGGTGAGATTCATCAAAGTATTTTCTCTTTAACGCAAAACTTTGGCATTAGCATTATTCTTTTAAACCGTCATGTGCAGGCAGCATTTCGTGTTAAAGCAATGAAATTTCCACTAAAAACTTCTGAAAGGAAGGAAGAGCGCGAAGCAGTGGAGGCAGCGTAAAGCTTGACCTGATATAAACAGGAAATTGTACAGCATTTTATAGCAAACATCAGGCGTTGAGCAATTTAAGCATAGTTAATTTTGTATACTGTAGGTTTTAGAAAAGATCCATAAACAAGACACCATGAAAGAAAATACAGAGATTCTCCTAAAGAAATCTGGAGAATGTCATGGACATTGTCTCTTATTCTACCATTGCTAAAAATATATTACTTCTCTATGTAT</genome_strand>
        <mrna_strand>ATATATTACTTGTTTGGATATCAATCTTCCTTGCCCCACCACCATCCTCACTTTAACCCACAAATCCCACTTTCTTTGGCCTAATTAACAATTTTTTCAATAAATCTTCTTTTCACTGAATCATACATACATTGGAAGAAAAACTCAAATCTTCTTTTCTTGAACTGGGGTTCAATTAAAAGATGTATTCAACTGTTTTTTACACTTCAGTGCATCCTTCCACTTCAGTTTTATCAAGAAAGCAGCTACCTTTATTGATTTCCAAGGACTTTTCTGCAGAGTTATATCATTCTTTACCTTGTAGGAGCTTGGAAAATGGGCATATCAACAAGGTTAAAGGAGTAAAAGTAAAAGCAACAATTGCTGAAGCTCCAGTTACTCCTACAGAGAAGACTGACTCTGGGGCTAACGGTGATTTGAAGGTTCCACAGAAGAAGTTGAAAGTACTTGTTGCGGGTGGTGGGATTGGTGGGTTAGTGTTTGCTTTGGCAGCAAAGAAAAGGGGGTTTGATGTATTGGTGTTTGAGAGGGATTTAAGTGCTATCAGAGGAGAGGGACAATATAGAGGTCCAATACAGATACAGAGCAATGCATTGGCTGCTTTAGAAGCAATTGATTTGGATGTTGCTGAAGACATTATGAATGCTGGCTGCATCACTGGTCAAAGGATTAATGGCTTGGTTGATGGTATTTCTGGCAACTG......................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTGCAAGTTTGATACGTTCACTCCAGCAGTGGAACGTGGACTTCCAGTGACAAGAGTTATCAGTCGCATGACTTTGCAGCAGATCCTTGCACGTGCTGTTGGTGAGGAGATAATTATGAATGAAAGTAATGTTGTAGACTTTGAGGATGATGGAGAGAAG.........................................................................................................................................................GTTACTGTGGTTCTTGAGAATGGACAACGATTTACAGGTGATCTTCTGGTTGGTGCTGATGGCATAAGATCTAAG.........................................................................................................................................................................GTACGGACTAATTTATTCGGACCCAGTGAAGCTACTTACTCTGGCTACACTTGTTATACTGGAATTGCAGATTTCGTTCCAGCTGATATTGATACAGTTGG...................................................................................................................GTACCGCGTCTTTTTGGGCCACAAACAGTACTTTGTTTCTTCAGATGTGGGGGGAGGCAAGATGCAGTGGTATGCATTTTACAATGAACCAGCTGGTGGTGCGGATGCCCCAAACG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAAAAGGAAAGATTGCTTAAAATATTTGGGGGATGGTGTGACAATGTTATAGACCTATTAGTTGCCACAGATGAAGATGCAATTCTTCGTCGTGACATCTATGATAGACCGCCAACCTTTAGTTGGGGAAGAGGTCGTGTTACATTGCTTGGGGACTCCGTCCATGCCATGCAGCCTAATTTGGGTCAAGGGGGATGCATGGCCATAGAG.........................................................................................................................................................GATAGCTATCAACTAGCACTGGAACTTGAAAAAGCATGCAGTCGAAGTGCAGAGTCTGGAAGCCCTGTGGATATCATCTCATCTTTAAGGAG.........................................................................................................................................................................................................................CTATGAAAGTGCTAGAAAACTTCGAGTTGGAGTCATCCATGGACTGGCTAGAATGGCTGCAATCATGGCATCTACTTACAAGGCTTATCTTGGCGTCGGACTTGGTCCACTATCA.....................................................................................................TTTTTGACGCAGTATAGAATACCACATCCTGGAAGAGTTGGTGGAAGAGTTTTTATTGACTTGGGAATGCCTCTGATGTTAAGTTGGGTTCTAGGAGGCAATGG.......................................................................................................................................................................................................................................................................................................................................................................GGACAAGCTTGAAGGCAGAATAAAACATTGCAGGCTATCTGAGAAA..............................................................................................................GCAAATGACCAATTGAGAAAATGGTTTGAAGATGATGATGCTTTAGAGCGTGCTACTGATGCAGA...................................................................................................GTGGTTACTTTTACCTGCGGGGAATGGCTCTTCTGGTTTAGAAGCTATTGTTTTAAGCAGAGATGAGGATGTCCCTTGCACTGTCGG...........................................................................................................................................................................................................................................................................................................................GTCCATCTCACATACAAATATTCCTGGAAAATCAATAGTTTTACCTTTGCCACAG..........................................................................................GTATCTGAAATGCACGCCCGGATATCATGCAAAGACGGAGCATTTTTTGTAACTGATTTACGAAGTGAACATGGTACCTGGGTTACAGA...........................................................................................TAATGAAGGCAGAAGATATCGGACGTCTCCAAACTTCCCTACACGTTTTCATCCATCAGATGTTATCGAATTTGGTTCTGATAAG.............................................................................GCAGCATTTCGTGTTAAAGCAATGAAATTTCCACTAAAAACTTCTGAAAGGAAGGAAGAGCGCGAAGCAGTGGAGGCAGCGTAAAGCTTGACCTGATATAAACAGGAAATTGTACAGCATTTTATAGCAAACATCAGGCGTTGAGCAATTTAAGCATAGTTAATTTTGTATACTGTAGGTTTTAGAAAAGATCCATAAACAAGACACCATGAAAGAAAATACAGAGATTCTCCTAAAGAAATCTGGAGAATGTCATGGACATTGTCTCTTATTCTACCATTGCTAAAAATATATTACTTCTCTATGTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0012A12-ClXVT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U565922" ref_strand="+" ref_description="SGN-U565922 Tomato 200607#2 [17 ESTs aligned] (*GB) gi|15229727|ref|NP_190603.1| (e_value=3e-139) expressed protein [Arabidopsis thaliana]; (*ATH) AT3G50340.1 (e_value=2e-141) | Symbol: None | expressed protein, predicted protein, Arabidopsis thaliana | chr3:18676076-18677654 REVERSE | Aliases: F11C1.180; ">
      <seq>atgcttctccttttccccaaatttacttctccaccgttcccacacactcgcttttgcttcatttcgccgtttctgttaccgttaatcaacgtgatcggattttttacactcttttccggccggattgttgaagttacaatggtcgacgtagaccggaggatgaccgggttgaatccggctcacttagccggactccgccgtctctctgcaagagccgccgcttcttctccgtcgactccgatgcctcctcggaatagtctcctttcgttctcctttcttgcagataaagttatatctcatctaaagagctctggtattcaggttcaggccgggttgtcggatgtggaattcgctagagctgaagcagagtttgggtttgcttttccacctgacttaaaagctgttctctccgccggtttacccatcggacctggttttcctgactggcgctctactggtccggctcggttccagcttcgtgcttcgattgacttacccatcgctgcaatttcattccatatagctcgtaatgctttgtggtctaagtcatggggtcctaggccatgtgacccagaaaaggcaattaaaatagcaagaaatgctctcaaaagagctccacttctgatacccattttcaaccattgttacattccttgtaatccttgtttagcaggtaacccaattttctacgtggacgaaaataggattttctgctgcggatttgatctatccgacttctttgatcgtgaatcatctttgttccaaagttcagatcctcagattctttcaaaacagcgctctttaagtgaaaaatccgctggttcatcatccactttctcaaggaggagtctcgatacactctccggtggtcggacgccgcgttgggtagagttctggagcgatgctgccgtagatcgaaggcggaggaactcaaattcgtcatcgtcatgttcaacctcaccggaaaggtactttgaaatgcccaagtccaaaatgcctaattgggtcgacgagtacgtagataatatcgggtcggttttaaaagaaggcgggtgggctgaatcggatgtgaaggaaattgtacaagttacagcttctggattcttcgaaggtgaaatgatattgttggataatcaagcggttatggatgctcttcttgtgaaagcggatcggttctctgattcgctccgtaaagccgggtggagctccgaagaagtttcttacgcactgggttttgattatcgaccggagaaggagaagaaaccggctaagaagctttcaccggagttagcggaaagaatcgggaaattggctgagtcggtaacccgttcacggtcatcctcatagaattggttaaccggctaccggcaaacatcgagattcctttttttcatgttcttttttagattttcgaaacctcgggtttggtatatgcctcttttttggtacaattgatattcagacgcaaaaaagaagagaaacaaatacgcgttgatgtattattattaaaaaagtacaaagaatttgaaacatggaaaaaattagaagaaattgtattaagttctcagtttttccgtattggaatataaaaacttgtggtaaaaaatgttaaatgttagacagctgcaagtgttctggtaaataaaactttataataataaaatgtagtgggtaaggattaaggtggcacaggtttctaacagggggaatgcacgtgtgtgcctttctgaagaaaaagagacgttgctttaggcccctcccttacgaaaacttagcatcgtaattgctctatcgcaatttatttgtagcaatttttattttttttaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0012A12-ClXVT/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0012A12.1" temp_strand="-" temp_description="C02HBa0012A12.1  AC215355.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0012A12 sequenced_by:kribb upload_account_name:korea">
        <position start="38484" stop="36036"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="38184" g_stop="36334" g_length="1851"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="1840" r_length="1840" r_score="0.978"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0012A12.1" gen_strand="-" ref_id="SGN-U565922" ref_strand="+">
        <total_alignment_score>0.978</total_alignment_score>
        <cumulative_length_of_scored_exons>1851</cumulative_length_of_scored_exons>
        <coverage percentage="1.006" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0012A12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U565922" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="38184" e_stop="36334"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATACTTCTCCTTTTCCCCAAATTTACTTCTCCACCGTTCCCACACACTCGCTTTTGCTTCATTTCGCCGTTTCTGTTACCGTTAATCAACGTGATCGGATTTTTTACACTCTTTTCCGGCCGGATTGTTGAAGTTACAATGGTCGACGTAGACCGGAGGATGACCGGGTTGAATCCGGCTCACTTAGCCGGACTCCGCCGTCTCTCTGCAAGAGCCGCCGCTTCTTCTCCGTCGACTCCGATGCCTCCTCGGAATAGTCTCCTTTCGTTCTCCTTTCTTGCAGATAAAGTTATATCTCATCTAAAGAGCTCTGGTATTCAGGTTCAGGCCGGGTTGTCGGATGTGGAATTCGCTAGAGCTGAAGCAGAGTTTGGGTTTGCTTTTCCACCTGACTTAAAAGCTGTTCTCTCCGCCGGTTTACCCATCGGACCTGGTTTTCCTGACTGGCGCTCTACTGGTCCGGCTCGGTTCCAGCTTCGTGCTTCGATTGACTTACCCATCGCTGCAATTTCATTCCATATAGCTCGTAATGCTTTGTGGTCTAAGTCATGGGGTCCTAGGCCATGTGACCCAGAAAAGGCAATTAAAATAGCAAGAAATGCTCTCAAAAGAGCTCCACTTCTGATACCCATTTTCAACCATTGTTACATTCCTTGTAATCCTTGTTTAGCAGGTAACCCAATTTTCTACGTGGACGAAAATAGGATTTTCTGCTGCGGATTTGATCTATCCGACTTCTTTGATCGTGAATCATCTTTGTTCCAAAGTTCAGATCCTCAGATTCTTTCAAAACAGCGCTCTTTAAGTGAAAAATCCGCTGGTTCATCATCCACTTTCTCAAGGAGGAGTCTCGATACACTCTCCGGTGGTCGGACGCCGCGTTGGGTAGAGTTCTGGAGCGACGCTGCCGTAGATCGAAGGCGGAGGAACTCAAATTCGTCATCGTCATGTTCAACCTCACCGGAAAGGTACTTTGAAATGCCCAAGTCCAAAATGCCTAATTGGGTCGACGAGTACGTAGATAATATCGGGTCGGTTTTAAAAGAAGGCGGGTGGGCTGAATCGGATGTGAAGGAAATTGTACAAGTTACAGCTTCTGGATTCTTCGAAGGTGAAATGATATTGTTAGATAATCAAGCGGTTATGGATGCTCTTCTTGTGAAAGCGGATCGGTTCTCTGATTCGCTCCGTAAAGCCGGGTGGAGCTCCGAAGAAGTTTCTTACGCACTGGGTTTTGATTATCGACCGGAGAAGGAGAAGAAACCGGCTAAGAAGCTTTCACCGGAGTTAGCGGAAAGAATCGGGAAATTGGCTGAGTCGGTAACCCGTTCACGGTCATCCTCATAGAATTGGTTAACCGGCTACCGGCAAACATCGAGATTCC-TTTTTTCATGTTCTTTTTTAGATTTTCGAAACCTCGGGTTTGGTATATGCCTCTTTTTTGGTACAATTGATATTCAGACGCAAAAAAGAAAAAAAAAAGAAGAGAAACAAATACGCGTTGATGTATTATTATTAAAAAAGTACAAAGAATTTGAAATATGGAAAAAATTAGAAGAAATTGTATTAAGTTCTCTGTTTTTCCGTATTGGAATATAAAAACTTGTTGGTAAAAATGTTAAATGTTAGACAGCTGCAAGTGTTCTGGTAAATAGAACTTTATAATAATAAAATGTAGTGGGTAAGGATTAAGGTGGCACAGGTTTCGAATAGGGGGAATGCACGTGTGTGCCTTTCTGAAGAAAAAGAGACGTTGCTTTAGGCCCCTTCCATTACGAAAACTTAGCATCGTAATTGCTCTATCTCAATTTATTTATCGTAATTTTTAAATTTTTATCGAAAAATATAATT</genome_strand>
        <mrna_strand>ATGCTTCTCCTTTTCCCCAAATTTACTTCTCCACCGTTCCCACACACTCGCTTTTGCTTCATTTCGCCGTTTCTGTTACCGTTAATCAACGTGATCGGATTTTTTACACTCTTTTCCGGCCGGATTGTTGAAGTTACAATGGTCGACGTAGACCGGAGGATGACCGGGTTGAATCCGGCTCACTTAGCCGGACTCCGCCGTCTCTCTGCAAGAGCCGCCGCTTCTTCTCCGTCGACTCCGATGCCTCCTCGGAATAGTCTCCTTTCGTTCTCCTTTCTTGCAGATAAAGTTATATCTCATCTAAAGAGCTCTGGTATTCAGGTTCAGGCCGGGTTGTCGGATGTGGAATTCGCTAGAGCTGAAGCAGAGTTTGGGTTTGCTTTTCCACCTGACTTAAAAGCTGTTCTCTCCGCCGGTTTACCCATCGGACCTGGTTTTCCTGACTGGCGCTCTACTGGTCCGGCTCGGTTCCAGCTTCGTGCTTCGATTGACTTACCCATCGCTGCAATTTCATTCCATATAGCTCGTAATGCTTTGTGGTCTAAGTCATGGGGTCCTAGGCCATGTGACCCAGAAAAGGCAATTAAAATAGCAAGAAATGCTCTCAAAAGAGCTCCACTTCTGATACCCATTTTCAACCATTGTTACATTCCTTGTAATCCTTGTTTAGCAGGTAACCCAATTTTCTACGTGGACGAAAATAGGATTTTCTGCTGCGGATTTGATCTATCCGACTTCTTTGATCGTGAATCATCTTTGTTCCAAAGTTCAGATCCTCAGATTCTTTCAAAACAGCGCTCTTTAAGTGAAAAATCCGCTGGTTCATCATCCACTTTCTCAAGGAGGAGTCTCGATACACTCTCCGGTGGTCGGACGCCGCGTTGGGTAGAGTTCTGGAGCGATGCTGCCGTAGATCGAAGGCGGAGGAACTCAAATTCGTCATCGTCATGTTCAACCTCACCGGAAAGGTACTTTGAAATGCCCAAGTCCAAAATGCCTAATTGGGTCGACGAGTACGTAGATAATATCGGGTCGGTTTTAAAAGAAGGCGGGTGGGCTGAATCGGATGTGAAGGAAATTGTACAAGTTACAGCTTCTGGATTCTTCGAAGGTGAAATGATATTGTTGGATAATCAAGCGGTTATGGATGCTCTTCTTGTGAAAGCGGATCGGTTCTCTGATTCGCTCCGTAAAGCCGGGTGGAGCTCCGAAGAAGTTTCTTACGCACTGGGTTTTGATTATCGACCGGAGAAGGAGAAGAAACCGGCTAAGAAGCTTTCACCGGAGTTAGCGGAAAGAATCGGGAAATTGGCTGAGTCGGTAACCCGTTCACGGTCATCCTCATAGAATTGGTTAACCGGCTACCGGCAAACATCGAGATTCCTTTTTTTCATGTTCTTTTTTAGATTTTCGAAACCTCGGGTTTGGTATATGCCTCTTTTTTGGTACAATTGATATTCAGACGC-----------AAAAAAGAAGAGAAACAAATACGCGTTGATGTATTATTATTAAAAAAGTACAAAGAATTTGAAACATGGAAAAAATTAGAAGAAATTGTATTAAGTTCTCAGTTTTTCCGTATTGGAATATAAAAACTTGTGGTAAAAAATGTTAAATGTTAGACAGCTGCAAGTGTTCTGGTAAATAAAACTTTATAATAATAAAATGTAGTGGGTAAGGATTAAGGTGGCACAGGTTTCTAACAGGGGGAATGCACGTGTGTGCCTTTCTGAAGAAAAAGAGACGTTGCTTTAGGCCCC-TCCCTTACGAAAACTTAGCATCGTAATTGCTCTATCGCAATTTATTTGTAGCAATTTTTATTTTTTTTAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0012A12-ClXVT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U565923" ref_strand="+" ref_description="SGN-U565923 Tomato 200607#2 [3 ESTs aligned] (*GB) gi|15229727|ref|NP_190603.1| (e_value=3e-56) expressed protein [Arabidopsis thaliana]; (*ATH) AT3G50340.1 (e_value=2e-58) | Symbol: None | expressed protein, predicted protein, Arabidopsis thaliana | chr3:18676076-18677654 REVERSE | Aliases: F11C1.180; ">
      <seq>acaacaagtttttatattccaatacggaaaaacagagaacttaatacaatttcttctaattttttccatatttcaaattctttgtacttttttaataataatacatcaacgcgtatttgtttctcttcttttttttttcttttttgcgtctgaatatcaattgtaccaaaaaagaggcatataccaaacccgaggtttcgaaaatctaaaaaagaacatgaaaaaaggaatctcgatgtttgccggtagccggttaaccaattctatgaggatgaccgtgaacgggttaccgactcagccaatttcccgattctttccgctaactccggtgaaagcttcttagccggtttcttctccttctccggtcgataatcaaaacccagtgcgtaagaaacttcttcggagctccacccggctttacggagcgaatcagagaaccgatccgctttcacaagaagagcatccataaccgcttgattatctaacaatatcatttcaccttcgaagaatccagaagctgtaacttgtacaatttccttcacatccgattcagcccacccgccttcttttaaaaccgacccgatattatctacgtactcgtcgacccaattaggcattttggacttgggcatttcaaagtacctttccggtgaggttgaacatgacgatgacgaatttgagttcctccgccttcgatctacggcagcgtcgctccagaactctacccaacgcggcgtc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0012A12-ClXVT/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0012A12.1" temp_strand="+" temp_description="C02HBa0012A12.1  AC215355.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0012A12 sequenced_by:kribb upload_account_name:korea">
        <position start="36276" stop="37612"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36575" g_stop="37312" g_length="738"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="738" r_length="738" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0012A12.1" gen_strand="+" ref_id="SGN-U565923" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>738</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0012A12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U565923" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36575" e_stop="37312"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCAACAAGTTTTTATATTCCAATACGGAAAAACAGAGAACTTAATACAATTTCTTCTAATTTTTTCCATATTTCAAATTCTTTGTACTTTTTTAATAATAATACATCAACGCGTATTTGTTTCTCTTCTTTTTTTTTTCTTTTTTGCGTCTGAATATCAATTGTACCAAAAAAGAGGCATATACCAAACCCGAGGTTTCGAAAATCTAAAAAAGAACATGAAAAAAGGAATCTCGATGTTTGCCGGTAGCCGGTTAACCAATTCTATGAGGATGACCGTGAACGGGTTACCGACTCAGCCAATTTCCCGATTCTTTCCGCTAACTCCGGTGAAAGCTTCTTAGCCGGTTTCTTCTCCTTCTCCGGTCGATAATCAAAACCCAGTGCGTAAGAAACTTCTTCGGAGCTCCACCCGGCTTTACGGAGCGAATCAGAGAACCGATCCGCTTTCACAAGAAGAGCATCCATAACCGCTTGATTATCTAACAATATCATTTCACCTTCGAAGAATCCAGAAGCTGTAACTTGTACAATTTCCTTCACATCCGATTCAGCCCACCCGCCTTCTTTTAAAACCGACCCGATATTATCTACGTACTCGTCGACCCAATTAGGCATTTTGGACTTGGGCATTTCAAAGTACCTTTCCGGTGAGGTTGAACATGACGATGACGAATTTGAGTTCCTCCGCCTTCGATCTACGGCAGCGTCGCTCCAGAACTCTACCCAACGCGGCGTC</genome_strand>
        <mrna_strand>ACAACAAGTTTTTATATTCCAATACGGAAAAACAGAGAACTTAATACAATTTCTTCTAATTTTTTCCATATTTCAAATTCTTTGTACTTTTTTAATAATAATACATCAACGCGTATTTGTTTCTCTTCTTTTTTTTTTCTTTTTTGCGTCTGAATATCAATTGTACCAAAAAAGAGGCATATACCAAACCCGAGGTTTCGAAAATCTAAAAAAGAACATGAAAAAAGGAATCTCGATGTTTGCCGGTAGCCGGTTAACCAATTCTATGAGGATGACCGTGAACGGGTTACCGACTCAGCCAATTTCCCGATTCTTTCCGCTAACTCCGGTGAAAGCTTCTTAGCCGGTTTCTTCTCCTTCTCCGGTCGATAATCAAAACCCAGTGCGTAAGAAACTTCTTCGGAGCTCCACCCGGCTTTACGGAGCGAATCAGAGAACCGATCCGCTTTCACAAGAAGAGCATCCATAACCGCTTGATTATCTAACAATATCATTTCACCTTCGAAGAATCCAGAAGCTGTAACTTGTACAATTTCCTTCACATCCGATTCAGCCCACCCGCCTTCTTTTAAAACCGACCCGATATTATCTACGTACTCGTCGACCCAATTAGGCATTTTGGACTTGGGCATTTCAAAGTACCTTTCCGGTGAGGTTGAACATGACGATGACGAATTTGAGTTCCTCCGCCTTCGATCTACGGCAGCGTCGCTCCAGAACTCTACCCAACGCGGCGTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0012A12-ClXVT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U571625" ref_strand="+" ref_description="SGN-U571625 Tomato 200607#2 [17 ESTs aligned] (*GB) gi|157340823|emb|CAO47628.1| (e_value=4e-74) unnamed; (*ATH) AT4G39280.1 (e_value=8e-70)  Symbol: None | phenylalanyl-tRNA synthetase, putative / phenylalanine--tRNA ligase, putative, similar to SP:Q9Y285 Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20) (Phenylalanine- -tRNA ligase alpha chain) (PheRS) {Homo sapiens}; contains Pfam... ; (*SWP) sp|Q9T034|SYFA_ARATH (e_value=7e-69) Probable phenylalanyl-tRNA synthetase alpha chain OS=Arabidopsis thaliana GN=At4g39280; ">
      <seq>ggaagtcgttaaagtaaaatcgccgttaatttgtttctccctaacagatagcgccgttcatttgtttctccctagcagaaccctagagagagtgagagtatggcggacgaagctgaagacgctatattggcatatctcaaagacaacgatgagatttcaaattctgcaaaatttgctcaagattttggttttggccatgacgagatcctcaatgtcatacgcagactccatggatttcgattcgtggatgctcaggacattaggagagagagatgggtgcttactgaagaggggaaaacttatgctgctgtaggttctcctgaatttcagcttttctcagcagtaccaccggagggaattgcgcgggaagagttgcagaaaaaattggatcctgcagtttataaaattggttgccagcaagctataaagaacaagtgggtggagatggcaaagacacatgtctcaaggaaggtccaacatgctgatgacaaagttaaaaatttgctgttgcggatacaaaatgacgaggctgtcaatcaggaggatattgatgctctaaagcgaagaaaactaataattcagcaggtttggaaaggaaattccgtaagaaaaggtcccgaatatgccccaaaaaggaaaagagcagcgactgatctcactcgagaaaatttacagaggggtgactggaaaggaattggaatttaaagagtacaacttcagtgctaaaggtcagccagttgaaggtggccatcttcatcca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0012A12-ClXVT/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0012A12.1" temp_strand="+" temp_description="C02HBa0012A12.1  AC215355.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0012A12 sequenced_by:kribb upload_account_name:korea">
        <position start="55736" stop="62825"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="56036" g_stop="56290" g_length="255"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="255" r_length="255" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="56291" i_stop="59846" i_length="3556">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="59847" g_stop="59969" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="256" r_stop="378" r_length="123" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="59970" i_stop="60106" i_length="137">
            <donor d_prob="0.850" d_score="1.00"/>
            <acceptor a_prob="0.967" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="60107" g_stop="60199" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="379" r_stop="471" r_length="93" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="60200" i_stop="61226" i_length="1027">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="61227" g_stop="61283" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="472" r_stop="528" r_length="57" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="61284" i_stop="61451" i_length="168">
            <donor d_prob="0.960" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="61452" g_stop="61507" g_length="56"/>
          <reference_exon_boundary r_type="cDNA" r_start="529" r_stop="584" r_length="56" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="61508" i_stop="61632" i_length="125">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="61633" g_stop="61725" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="585" r_stop="677" r_length="93" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="61726" i_stop="62443" i_length="718">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="62444" g_stop="62525" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="678" r_stop="760" r_length="83" r_score="0.976"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0012A12.1" gen_strand="+" ref_id="SGN-U571625" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>759</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0012A12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U571625" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="56036" e_stop="56290"/>
          <exon e_start="59847" e_stop="59969"/>
          <exon e_start="60107" e_stop="60199"/>
          <exon e_start="61227" e_stop="61283"/>
          <exon e_start="61452" e_stop="61507"/>
          <exon e_start="61633" e_stop="61725"/>
          <exon e_start="62444" e_stop="62525"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAAGTCGTTAAAGTAAAATCGCCGTTAATTTGTTTCTCCCTAACAGATAGCGCCGTTCATTTGTTTCTCCCTAGCAGAACCCTAGAGAGAGTGAGAGTATGGCGGACGAAGCTGAAGACGCTATATTGGCATATCTCAAAGACAACGATGAGATTTCAAATTCTGCAAAATTTGCTCAAGATTTTGGTTTTGGCCATGACGAGATCCTCAATGTCATACGCAGACTCCATGGATTTCGATTCGTGGATGCTCAGGTACTTTGTTCGTCTTTCTACTAGTTGAATTTTCGTTCTATCCTCTTTTGGTTAGGTTGCAGCTACGGATGCTTGTTTGACTCATGATAAACTTCAAATTTCAGTTTTTTCTCTATGCCGTAACTGCGGTATCTTGAGTAGTCTATGGAAAAGACCAGTCATTCATCCCCCATTGCAATCAATTGTTGCAATTTGGTCACTGTTTTAAAGTCTTTTTGTAGTACCTCGGGTTATGTCAAAGGAGATAAGACGCTTGCGGATTTTCCCGCAGAGTCAGAGAACCTGATTGATGATGCTTTGCTAGATCACACCCCCATTACATATTATTTGGACTGCGTGGCTGGAAAGGACATGTTATCCGAGGGAAAGATAGCATAGGCTTTACACAGTTTATTCTTTTAGTACGGGGCTATAAGGTAGAAATATGATTTGTGTTCATGGTTTTATTGAAGACATGAGGATGTAGTGGAGAAACTGTAACTTTCAGCTAGTTTTTACTCTACGCAGTAACATACTGGTACTGATTTTGAAAATAGTTTTGTTCTGCCTTTTTATGTAAAAACATCTGTACAAATGTTATAGCAAAGCAGGTCAATACCATATTAAGGCATTATGTGTAGGATCCAGGTTAATACATAGCACATTCCAGGGAAAATAGGCTTATGCAAATTGTTGGGAAATATGTCTAGTGCTCTCATCGCCTTCTTTGAGTCTAAGCTTCTCATCTCCATTCTTATCTCTATCATTAGTTATTCTTTATTTCAATATTTCCATTGTAATTGAGTAGTTTGAGTATTGCAATTAAGGTCTTAAAGTTGTAATTGTATTCCAATTCTCTTTGATATAGTGAGAAATTTGGTTTGTTACACTGGTGCTTTCATTGTTCGTACTCCAAATGATAATGGTGGTATTAGACCGATTTAGTGGTGGCAACGAGCCAGAGGGTTGGATTCTTCGGGCCGAGCAGTATTTCAACTACCTTGGTTCCCCCCAAAAGGACTGGCTACCTCTTCCTTGTTTCTACCTTGATGGTGAAGCTCTTACTTGGTTTACTTGGTTGCATAACAAGCAATTCTTTGATTGGAAGCATGTGATGGAAAAATTGCTCATGCAATTTCCACAATGAACCTTCATAGCTTCGTTGAGTATGGCAGGTACTTATCGTGCCTATTTTGACTATGAGCTTTATGCTACATTTGTTCCTCCGGCGACCTCTGCTGCTGCAGTTGTAGATCTAAGTCATGTCACACATTCATCTTACTTGGAAGATGACGTCACAAGTAGAAACACGGAGGTAGTCCATATGTTCGAGAAATTGCCTGAGAAGTATACCCATGTGGATTCCTTGGTATTGCTTACTGTAAGTAATGTTGAGATTGCAACTCTCCGCCTGGGCACTCCTCAAATTGGGAATGTAAAATCAGTAGAATTAAATTTGGTACATGAACCTTCTTCCATCATCGAAGGTCAGGTGTTCAATGAAATTCCATACACAACTGTAAGCTCTGGCATTCCTGAACTTAATGATAGATTATAGATAAGGTCCCTAACTAAGGTGTTAATGGATATGAAAGGATCTGATAGTGTGGATGAGGAAACTTTACAAGATATGTTGCTTTTTTTGACAAATCTCCTCAAAAGGATGCATCTGGTACTCTGGCTTGCATGTGCAAATTATTGGCATAGTATATCCATTAGCAACTTGCGTAGTTTCTCTTGTTGGTCGAGAAGCCATGATGTCGAATCGACATCTCGAACAAGATATGCTAACGAGGTATGTAGTTGCTAACTTTCTTGGTAGTGGCTCTCCTAAACGGACAGCTGATTTAGAGACATTTACAAGGATATGGAAGATTTATTTCTTGATAAATACTTCTTGGAGAATGAGAGTGCTATATCGATAAGTGCGATGCATTCTGTTGGATTGCTTCTTGCCGCTGAAAGTAGAAAATCTATTGGGGGATTCAGTGGTCAGCATATTTTGAGCCAATCTCCATTTAATCTTGTTGCCGATTTCCTTCTGCTTATTGTAACCATTCCAATCACTGCAGTGGATCTTGGTGTATGAGATCTAGGAATAGGTTTCGGGTTATGGCTCTTAACCGTTTATATAAAGAACGTTAGGAACTACTATCGTTGGGATGTGTTGACATGTTTTTCTTACTTGTGTATTCAAATCATATGAGTAGAATGTGGGATCCCGGACAATTAGGGTGTGTAAAGTCCTACTGGTTCAAGGGGTTCTCGGCAGTCGATAACTGCAATGCATTTACATGTCTTTTAAGAGCATATTCACGTTTCTTCAGTGAATATTATGCGGTAAAACATGATGTTTTGGTGGCCAACTTCCAACAAACATCAGTGCTGCATCTTCGCTGTATCACGGCTTGTTAGCATGATACAAGTGTTGGAGGTAAAAGTTTTGTTTAATGTTGCAAAGGAAGATATGAACCCACACCCAACTGTTTTCCAGAAGGCAGCTAACCAGTTGCACTTGAGCTCAAAAGTATCCCAAGATGTCCATGCTCGCTATGGGGCGCTCAGCCTGCTCTTTACCAGAGGCACTTTGATTATGGAAACTACCCCTACGCTGGACTGCAGAGAGGACAAACCACTCAGGATCTATCACGGATCACCTCAACTGCATCACCTGTGTTGGCGCAGGCTCCTCAAGAGAAAGGATCTGCAGCTTTTGCCACTGACTTTCTCATGGGTGAAGTTTCTGCTGCTGTATCAAAGACCCCTGCTGCCTCTATTGAGCGTGTGGAACTTTTGATCCAAAATCAAGATGAGAAGTTCAAGGCTGGTAGGCTCTCAAAACCATACAAGGGAATTCACGACTGTTTCGGGGTGACAATTAAGGAAGAATGGAACGAGAAGGGCATTGCAGCTCCTATTAGCCATCTGTGGCTAGAAAATATGACAAAGGTCCGTTATGTGTCTGCCAATAGTGCTTCGACAAGTTTGAGTTACATCATTAGGTGCATTGCTCTTTCGGACACATCTCATATTAATACACGTCTTTGCCATGTTAATCAGCAGCTAAGAAAGAATGATGCAACCATGTCTATAATACTCCAGGCTGCCAACCAAGTTGCTTGGTTGTTGCTTACCAACCTTACTATACTAGGGGATGCTTATGCCTACTCGAACCTTGAGGACAAGGTTCTTATTGAGGTTGGGGGTATTGTTATGAATGAGCCGAGACCAGTTATAGCAAAGCAGCCCAATACCATATTAAGGGGTTATGTGTGGGATCCAGGTTAATAAATAGCACGTTCCAGGAAAAATAGGCTTATGCTAAGTGTTGGAAAAAACGTCTAGTGCTCTCATCCCCTTTCTTTGAGTCTAAACTTCTCATCTCCATTCTTATCTCTATCCTTAGTTACTTGTAATTTCAATATTTCCGATGTAATTGAGTAGTTTGAGTATTGCTATCAAGGTCTTGAAGTTGTAATTGTATGCCGATTCTCTTTTTAATATAGTGAGAAATTTGGGTGTGTTACACTAGCTTGAACGAATGTGAAATAATATTTGAATTTGTTGAATTGTGCAGGACATTAGGAGAGAGAGATGGGTGCTTACTGAAGAGGGGAAAACTTATGCTGCTGTAGGTTCTCCTGAATTTCAGCTTTTCTCAGCAGTACCACCGGAGGGAATTGCGCGGGAAGAGTTGCAGGTTGCAGAGTATTTGGTTTTTAGTGTATTTACTAAGTTTTTTTTTTCATGCGCTATTTCAGATTGCTTTTACATCAAACATTACAAAATTCTTTAATTTGTGAGCTCTCTTTTGACTAATGGCCTATCTGGATGCAGAAAAAATTGGATCCTGCAGTTTATAAAATTGGTTGCCAGCAAGCTATAAAGAACAAGTGGGTGGAGATGGCAAAGACACATGTCTCAAGGAAGGTAGTTTAATTTTTCTAATTTTATTTTATTTTATCGGAAGTGTACTTTTGCTCATTCTCCTCTGTATGTCTAATATATCATTCTTGTTATGACCACAGTTTTTTCAATTGATGAAAAACTGCACCTTCTCCCAATCCTTGCCTAAAACAAAATTTTATAACCTTTGGTACCAAAAAATTATTCCCTTGTTAAGCTTACTTCTTTGTTGCTTGAACGTCTCTCATTTGGAGTTGCTTATCTCTGCCTCTCACGCGTAATTCATTTTGATAGGTAGTAGTAGTATTCCTGTCTTTGCAACTTTTATTTTGTTTTTAACCTCATTCTACTTAAAAGTTTTTCACACTATCACAATTGACTTTCTTCTCCTATCCCTTCTACTTGAGCTTGTAAGTGCTAAACTATATCTTTACAACCATCCTGAAGATTAGGACCTAAGTGTCTCCAATACTTGAGAGCAAAATATGTGGAAATCTATGAGTAGCGACCCTTTTGCTGAAAGTTCTTTTTCGTGACCCTTCTGCTATAATCTTTTTCTTTAGAGAAAAGAGGTGAGATAAATGGATAAGTCTCATCATATGACCTTGCTTAATTGATGAATAGCAGTTTATCTGTTCCTTGATCCACAGTGGTTCTTGCTTGGGGGACTAGGGTAGTCAAATTATGAGGAATCCCCTCATGCTTGACAATGACCATGAAGGTCTGAAAAAGCCTTTATTACTTGCTTAGTAACGTGCCATTTCTAGCCTATACTCAACATTATTAAACAGTAATTGTTCCCTTGTGGCGGTTCCAGGATTTTTCTGTTTCTCCTTCTATGTTTTGTTGCTGGTTATTTGTTTGCCATCTACTTCAGTTTATAGCACGTGGCCTTCTTTTGTTTTACTGTTTCCTTTCCTTATCAATATATGTTGAATGAGGTCTCTGAGAGCTATAATGTAGAGGCAGCAAGGGAAGGTGACATCAACATGTGGTTATTTTAATATTTCTTACAGGGCTGCCTTTTAGTCTATTTGTTGACTTCATGTAGGTCCAACATGCTGATGACAAAGTTAAAAATTTGCTGTTGCGGATACAAAATGACGAGGTATATAGTTTGTAGCCAGTGGTTATCTTATTCCCCAACCCTTCACTTTTTGCTCACCTTTCTTCTTTACTGATAGCTCTCCTCCCACACAGGAAATTAGTTATGGTTTTTGTAGCTAGTTGACTATTATATTAATCAATTTGACTGTAACAAAGCAATGCTTTGCAGGCTGTCAATCAGGAGGATATTGATGCTCTAAAGCGAAGAAAACTAATAATTCAGCAGTAATTATCTATTCTTTAATATCCTTTCCCCAGCACTTGATATTTACAGGATGTAATCTCACAGTTACTAATACATATTCCAAATGCTGGTTCTTAAATATGTTTCTTACTGCTGCTCTTTCTAGGGTTTGGAAAGGAAATTCCGTAAGAAAAGGTCCCGAATATGCCCCAAAAAGGAAAAGAGCAGCGACTGATCTCACTCGAGAAAATTTACAGAGGTAACTTTCCGACTCATTTGGAAAGAAAAAACTGTTAGTTCCTGTAAAAAGATAGCTAAGTCATTCAGTCATGCGCACAGCTCGGGTTAAATTACTGGAAAAACTAGTATTTTGGAATGTGACAGTCAACTTAAGGATAGTGCCTGAATAGGGAATTTGTATCAATTGCCAAGGCATTTGGTAAATGCTCTATAATTTAATCAAACACCAAAAATTGATGGAGTTTGACATTGTTTTTGAGTTTGAGAAGTCCCTACGTGTGGATCTCCAGGAAAGTGTACTTTTTTAGCTTCTTCTTCAGATTCTAACTCTAGTACTTATGCTTCAGAGTTTCGACTGTCCTGGAGTTTCACATGTAGGATATTCAAACTCCAAGACAATGTGCTCGAGGCTCGAGCTTATTTGTGTTTTAGCTTTTAGAGTTTTTACTTCCACATTTCTACCAGTTTTCACATGTGGTCTGTTTTTCAATTACTAGTCAAAAAAGTGGACAGCACTTAGTATTTTTATGTATAAAAAACAAAACAAATTCATGGGCTGGGTAAATGGGAAAAGTTGCAATATGCAGTTTTCACTGATGGTTTCGGAGTACTCAATATTTATTTCATACAAACTAACGTGTTTGAATAATTAATCTAAGTAGGGATCCACTAATTCCATGATGGACGAAGCATTTAGTTTGTGTTCTAATTAACATATGTTGCTTGTTCTTTTCAAGGGGTGACTGG-AAGGAATTGGAATTTAAAGAGTACAACTTCAGTGCTAAAGGTCAGCCAGTTGAAGGTGGCCATCTTCATCCA</genome_strand>
        <mrna_strand>GGAAGTCGTTAAAGTAAAATCGCCGTTAATTTGTTTCTCCCTAACAGATAGCGCCGTTCATTTGTTTCTCCCTAGCAGAACCCTAGAGAGAGTGAGAGTATGGCGGACGAAGCTGAAGACGCTATATTGGCATATCTCAAAGACAACGATGAGATTTCAAATTCTGCAAAATTTGCTCAAGATTTTGGTTTTGGCCATGACGAGATCCTCAATGTCATACGCAGACTCCATGGATTTCGATTCGTGGATGCTCAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACATTAGGAGAGAGAGATGGGTGCTTACTGAAGAGGGGAAAACTTATGCTGCTGTAGGTTCTCCTGAATTTCAGCTTTTCTCAGCAGTACCACCGGAGGGAATTGCGCGGGAAGAGTTGCAG.........................................................................................................................................AAAAAATTGGATCCTGCAGTTTATAAAATTGGTTGCCAGCAAGCTATAAAGAACAAGTGGGTGGAGATGGCAAAGACACATGTCTCAAGGAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCAACATGCTGATGACAAAGTTAAAAATTTGCTGTTGCGGATACAAAATGACGAG........................................................................................................................................................................GCTGTCAATCAGGAGGATATTGATGCTCTAAAGCGAAGAAAACTAATAATTCAGCA.............................................................................................................................GGTTTGGAAAGGAAATTCCGTAAGAAAAGGTCCCGAATATGCCCCAAAAAGGAAAAGAGCAGCGACTGATCTCACTCGAGAAAATTTACAGAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGTGACTGGAAAGGAATTGGAATTTAAAGAGTACAACTTCAGTGCTAAAGGTCAGCCAGTTGAAGGTGGCCATCTTCATCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0012A12-ClXVT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U571624" ref_strand="+" ref_description="SGN-U571624 Tomato 200607#2 [22 ESTs aligned] (*GB) gi|157340823|emb|CAO47628.1| (e_value=0) unnamed; (*ATH) AT4G39280.1 (e_value=0)  Symbol: None | phenylalanyl-tRNA synthetase, putative / phenylalanine--tRNA ligase, putative, similar to SP:Q9Y285 Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20) (Phenylalanine- -tRNA ligase alpha chain) (PheRS) {Homo sapiens}; contains Pfam... ; (*SWP) sp|Q9T034|SYFA_ARATH (e_value=0) Probable phenylalanyl-tRNA synthetase alpha chain OS=Arabidopsis thaliana GN=At4g39280; ">
      <seq>ggtaaaacttcggtgttaggtaaagcaaaatcgccgtctccctaacacaaaccctaacagaaatgagtatgagtatggcagatgaagcggaagatgccatattggcatatctcaaagacaacgatgagatttcaaattctgctaactttgctcaggatttgggttttagccatgacgacattgtcaatgttattcgcagactccatggatttcgacttgtggatgctaaggacattaggagagagagatgggtgcttactgaagaggggaaaacttatgctgctgtaggttcaccagaatttcagcttttctcagcagtaccatcggagggaattgcgagggaagatttgcagaaaaaattggatcctgcagtttataaaattggttgtcagcaagctataaagaacaagtgggtggagatggcaaagactcatgtctcaaagaaggtccaacatgctgatgacaaagttaaaaatttgctgttgcggatacaaaatgacgaggctgtcaatcaggaggatattgatgctctaaagcgaagaaaactaataattcagcaggtttggaaaggaaattccgtaagaaaaggtcccgaatatgccccaaaaaggaaaagagcagccactgatctcactcgggaaaatttacagaggggtgattggaaggaattggaatttaaagagtacaacttcagtgctaaaggtcagcctgtcgaaggcggccatcttcatccattgctcaaggttaggcggcaggtacaaacgatttttcttaatatggggtttgaggagatgccaacaaataattatgtcgaaagcagtttttggaacttcgatgcacttttccagccccaacagcaccctgcccgtgattcacatgatactttctttttgaaagtgccttcctctacaaagatgctgccagaagattatgttgagcgggtaaaagaaattcatgaatctggtggttaccaatctaggggatatgggtatgattggaaaagagaggaagcgaacaagaatcttttgcggacacacactactgctgtatcgtcaagaatgttgtatgcattagcgcagaagccattcgcccccaagaaatactattctattgatcgtgttttcagaaatgaagcagttgatcgaacacatcttgctgaatttcatcagatagaaggtttaatatgtgatcgtggactcactcttggtgacctgattggtgttcttcatgacttcttttctcgtctaggaatgtccaagcttcggttcaaacctgcttataatccttatactgagcccagcatggaaattttcagctaccatgaaggctttaagaaatgggtggaagttggaaattctggtatgtttaggcctgaaatgcttcttcctatgggtctgccagaagatgttcgtgttattgcctggggcctttcccttgagaggccaacgatgattctctacggaattgacaacatcagagatctttttggtcccaaggtggatctaggtctcatcaaaagaaatccaatatgccggcttggactttagtaatacagcatcatactctgtcacattgtttatggttgagatcagatttttctgctgctcaatcaagttgaggtcatttctttacatagattattttgttgatacagttttgaagattaaatctcagattgggtgggagctgtatttattcaagttttttgatgttataact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0012A12-ClXVT/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0012A12.1" temp_strand="+" temp_description="C02HBa0012A12.1  AC215355.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0012A12 sequenced_by:kribb upload_account_name:korea">
        <position start="55820" stop="66807"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="56132" g_stop="56290" g_length="159"/>
          <reference_exon_boundary r_type="cDNA" r_start="72" r_stop="230" r_length="159" r_score="0.887"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="56291" i_stop="59846" i_length="3556">
            <donor d_prob="0.999" d_score="0.86"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="59847" g_stop="59969" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="231" r_stop="353" r_length="123" r_score="0.959"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="59970" i_stop="60106" i_length="137">
            <donor d_prob="0.850" d_score="0.94"/>
            <acceptor a_prob="0.967" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="60107" g_stop="60199" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="354" r_stop="446" r_length="93" r_score="0.968"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="60200" i_stop="61226" i_length="1027">
            <donor d_prob="0.997" d_score="0.96"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="61227" g_stop="61283" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="447" r_stop="503" r_length="57" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="61284" i_stop="61451" i_length="168">
            <donor d_prob="0.960" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="61452" g_stop="61507" g_length="56"/>
          <reference_exon_boundary r_type="cDNA" r_start="504" r_stop="559" r_length="56" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="61508" i_stop="61632" i_length="125">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="61633" g_stop="61725" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="560" r_stop="652" r_length="93" r_score="0.978"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="61726" i_stop="62443" i_length="718">
            <donor d_prob="0.988" d_score="0.96"/>
            <acceptor a_prob="0.993" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="62444" g_stop="62534" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="653" r_stop="743" r_length="91" r_score="0.956"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="62535" i_stop="62656" i_length="122">
            <donor d_prob="0.999" d_score="0.94"/>
            <acceptor a_prob="0.984" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="62657" g_stop="62694" g_length="38"/>
          <reference_exon_boundary r_type="cDNA" r_start="744" r_stop="781" r_length="38" r_score="0.974"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="62695" i_stop="62846" i_length="152">
            <donor d_prob="0.869" d_score="0.00"/>
            <acceptor a_prob="0.998" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="62847" g_stop="62885" g_length="39"/>
          <reference_exon_boundary r_type="cDNA" r_start="782" r_stop="820" r_length="39" r_score="0.974"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="62886" i_stop="63505" i_length="620">
            <donor d_prob="0.999" d_score="0.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="63506" g_stop="63582" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="821" r_stop="897" r_length="77" r_score="0.987"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="63583" i_stop="63650" i_length="68">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.868" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="63651" g_stop="63735" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="898" r_stop="982" r_length="85" r_score="0.976"/>
        </exon>
        <intron i_serial="11">
          <gDNA_intron_boundary i_start="63736" i_stop="63814" i_length="79">
            <donor d_prob="0.945" d_score="1.00"/>
            <acceptor a_prob="0.964" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="12">
          <gDNA_exon_boundary g_start="63815" g_stop="63911" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="983" r_stop="1079" r_length="97" r_score="0.979"/>
        </exon>
        <intron i_serial="12">
          <gDNA_intron_boundary i_start="63912" i_stop="63999" i_length="88">
            <donor d_prob="0.931" d_score="0.96"/>
            <acceptor a_prob="0.977" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="13">
          <gDNA_exon_boundary g_start="64000" g_stop="64096" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="1080" r_stop="1176" r_length="97" r_score="1.000"/>
        </exon>
        <intron i_serial="13">
          <gDNA_intron_boundary i_start="64097" i_stop="64968" i_length="872">
            <donor d_prob="0.945" d_score="1.00"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="14">
          <gDNA_exon_boundary g_start="64969" g_stop="65040" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="1177" r_stop="1248" r_length="72" r_score="1.000"/>
        </exon>
        <intron i_serial="14">
          <gDNA_intron_boundary i_start="65041" i_stop="65225" i_length="185">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="15">
          <gDNA_exon_boundary g_start="65226" g_stop="65292" g_length="67"/>
          <reference_exon_boundary r_type="cDNA" r_start="1249" r_stop="1315" r_length="67" r_score="0.985"/>
        </exon>
        <intron i_serial="15">
          <gDNA_intron_boundary i_start="65293" i_stop="65370" i_length="78">
            <donor d_prob="0.887" d_score="0.98"/>
            <acceptor a_prob="0.977" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="16">
          <gDNA_exon_boundary g_start="65371" g_stop="65496" g_length="126"/>
          <reference_exon_boundary r_type="cDNA" r_start="1316" r_stop="1441" r_length="126" r_score="0.984"/>
        </exon>
        <intron i_serial="16">
          <gDNA_intron_boundary i_start="65497" i_stop="66306" i_length="810">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.991" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="17">
          <gDNA_exon_boundary g_start="66307" g_stop="66361" g_length="55"/>
          <reference_exon_boundary r_type="cDNA" r_start="1442" r_stop="1496" r_length="55" r_score="0.964"/>
        </exon>
        <intron i_serial="17">
          <gDNA_intron_boundary i_start="66362" i_stop="66445" i_length="84">
            <donor d_prob="0.883" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="18">
          <gDNA_exon_boundary g_start="66446" g_stop="66583" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="1497" r_stop="1633" r_length="137" r_score="0.804"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0012A12.1" gen_strand="+" ref_id="SGN-U571624" ref_strand="+">
        <total_alignment_score>0.954</total_alignment_score>
        <cumulative_length_of_scored_exons>1563</cumulative_length_of_scored_exons>
        <coverage percentage="0.909" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0012A12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U571624" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="56132" e_stop="56290"/>
          <exon e_start="59847" e_stop="59969"/>
          <exon e_start="60107" e_stop="60199"/>
          <exon e_start="61227" e_stop="61283"/>
          <exon e_start="61452" e_stop="61507"/>
          <exon e_start="61633" e_stop="61725"/>
          <exon e_start="62444" e_stop="62534"/>
          <exon e_start="62657" e_stop="62694"/>
          <exon e_start="62847" e_stop="62885"/>
          <exon e_start="63506" e_stop="63582"/>
          <exon e_start="63651" e_stop="63735"/>
          <exon e_start="63815" e_stop="63911"/>
          <exon e_start="64000" e_stop="64096"/>
          <exon e_start="64969" e_stop="65040"/>
          <exon e_start="65226" e_stop="65292"/>
          <exon e_start="65371" e_stop="65496"/>
          <exon e_start="66307" e_stop="66361"/>
          <exon e_start="66446" e_stop="66583"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTATGGCGGACGAAGCTGAAGACGCTATATTGGCATATCTCAAAGACAACGATGAGATTTCAAATTCTGCAAAATTTGCTCAAGATTTTGGTTTTGGCCATGACGAGATCCTCAATGTCATACGCAGACTCCATGGATTTCGATTCGTGGATGCTCAGGTACTTTGTTCGTCTTTCTACTAGTTGAATTTTCGTTCTATCCTCTTTTGGTTAGGTTGCAGCTACGGATGCTTGTTTGACTCATGATAAACTTCAAATTTCAGTTTTTTCTCTATGCCGTAACTGCGGTATCTTGAGTAGTCTATGGAAAAGACCAGTCATTCATCCCCCATTGCAATCAATTGTTGCAATTTGGTCACTGTTTTAAAGTCTTTTTGTAGTACCTCGGGTTATGTCAAAGGAGATAAGACGCTTGCGGATTTTCCCGCAGAGTCAGAGAACCTGATTGATGATGCTTTGCTAGATCACACCCCCATTACATATTATTTGGACTGCGTGGCTGGAAAGGACATGTTATCCGAGGGAAAGATAGCATAGGCTTTACACAGTTTATTCTTTTAGTACGGGGCTATAAGGTAGAAATATGATTTGTGTTCATGGTTTTATTGAAGACATGAGGATGTAGTGGAGAAACTGTAACTTTCAGCTAGTTTTTACTCTACGCAGTAACATACTGGTACTGATTTTGAAAATAGTTTTGTTCTGCCTTTTTATGTAAAAACATCTGTACAAATGTTATAGCAAAGCAGGTCAATACCATATTAAGGCATTATGTGTAGGATCCAGGTTAATACATAGCACATTCCAGGGAAAATAGGCTTATGCAAATTGTTGGGAAATATGTCTAGTGCTCTCATCGCCTTCTTTGAGTCTAAGCTTCTCATCTCCATTCTTATCTCTATCATTAGTTATTCTTTATTTCAATATTTCCATTGTAATTGAGTAGTTTGAGTATTGCAATTAAGGTCTTAAAGTTGTAATTGTATTCCAATTCTCTTTGATATAGTGAGAAATTTGGTTTGTTACACTGGTGCTTTCATTGTTCGTACTCCAAATGATAATGGTGGTATTAGACCGATTTAGTGGTGGCAACGAGCCAGAGGGTTGGATTCTTCGGGCCGAGCAGTATTTCAACTACCTTGGTTCCCCCCAAAAGGACTGGCTACCTCTTCCTTGTTTCTACCTTGATGGTGAAGCTCTTACTTGGTTTACTTGGTTGCATAACAAGCAATTCTTTGATTGGAAGCATGTGATGGAAAAATTGCTCATGCAATTTCCACAATGAACCTTCATAGCTTCGTTGAGTATGGCAGGTACTTATCGTGCCTATTTTGACTATGAGCTTTATGCTACATTTGTTCCTCCGGCGACCTCTGCTGCTGCAGTTGTAGATCTAAGTCATGTCACACATTCATCTTACTTGGAAGATGACGTCACAAGTAGAAACACGGAGGTAGTCCATATGTTCGAGAAATTGCCTGAGAAGTATACCCATGTGGATTCCTTGGTATTGCTTACTGTAAGTAATGTTGAGATTGCAACTCTCCGCCTGGGCACTCCTCAAATTGGGAATGTAAAATCAGTAGAATTAAATTTGGTACATGAACCTTCTTCCATCATCGAAGGTCAGGTGTTCAATGAAATTCCATACACAACTGTAAGCTCTGGCATTCCTGAACTTAATGATAGATTATAGATAAGGTCCCTAACTAAGGTGTTAATGGATATGAAAGGATCTGATAGTGTGGATGAGGAAACTTTACAAGATATGTTGCTTTTTTTGACAAATCTCCTCAAAAGGATGCATCTGGTACTCTGGCTTGCATGTGCAAATTATTGGCATAGTATATCCATTAGCAACTTGCGTAGTTTCTCTTGTTGGTCGAGAAGCCATGATGTCGAATCGACATCTCGAACAAGATATGCTAACGAGGTATGTAGTTGCTAACTTTCTTGGTAGTGGCTCTCCTAAACGGACAGCTGATTTAGAGACATTTACAAGGATATGGAAGATTTATTTCTTGATAAATACTTCTTGGAGAATGAGAGTGCTATATCGATAAGTGCGATGCATTCTGTTGGATTGCTTCTTGCCGCTGAAAGTAGAAAATCTATTGGGGGATTCAGTGGTCAGCATATTTTGAGCCAATCTCCATTTAATCTTGTTGCCGATTTCCTTCTGCTTATTGTAACCATTCCAATCACTGCAGTGGATCTTGGTGTATGAGATCTAGGAATAGGTTTCGGGTTATGGCTCTTAACCGTTTATATAAAGAACGTTAGGAACTACTATCGTTGGGATGTGTTGACATGTTTTTCTTACTTGTGTATTCAAATCATATGAGTAGAATGTGGGATCCCGGACAATTAGGGTGTGTAAAGTCCTACTGGTTCAAGGGGTTCTCGGCAGTCGATAACTGCAATGCATTTACATGTCTTTTAAGAGCATATTCACGTTTCTTCAGTGAATATTATGCGGTAAAACATGATGTTTTGGTGGCCAACTTCCAACAAACATCAGTGCTGCATCTTCGCTGTATCACGGCTTGTTAGCATGATACAAGTGTTGGAGGTAAAAGTTTTGTTTAATGTTGCAAAGGAAGATATGAACCCACACCCAACTGTTTTCCAGAAGGCAGCTAACCAGTTGCACTTGAGCTCAAAAGTATCCCAAGATGTCCATGCTCGCTATGGGGCGCTCAGCCTGCTCTTTACCAGAGGCACTTTGATTATGGAAACTACCCCTACGCTGGACTGCAGAGAGGACAAACCACTCAGGATCTATCACGGATCACCTCAACTGCATCACCTGTGTTGGCGCAGGCTCCTCAAGAGAAAGGATCTGCAGCTTTTGCCACTGACTTTCTCATGGGTGAAGTTTCTGCTGCTGTATCAAAGACCCCTGCTGCCTCTATTGAGCGTGTGGAACTTTTGATCCAAAATCAAGATGAGAAGTTCAAGGCTGGTAGGCTCTCAAAACCATACAAGGGAATTCACGACTGTTTCGGGGTGACAATTAAGGAAGAATGGAACGAGAAGGGCATTGCAGCTCCTATTAGCCATCTGTGGCTAGAAAATATGACAAAGGTCCGTTATGTGTCTGCCAATAGTGCTTCGACAAGTTTGAGTTACATCATTAGGTGCATTGCTCTTTCGGACACATCTCATATTAATACACGTCTTTGCCATGTTAATCAGCAGCTAAGAAAGAATGATGCAACCATGTCTATAATACTCCAGGCTGCCAACCAAGTTGCTTGGTTGTTGCTTACCAACCTTACTATACTAGGGGATGCTTATGCCTACTCGAACCTTGAGGACAAGGTTCTTATTGAGGTTGGGGGTATTGTTATGAATGAGCCGAGACCAGTTATAGCAAAGCAGCCCAATACCATATTAAGGGGTTATGTGTGGGATCCAGGTTAATAAATAGCACGTTCCAGGAAAAATAGGCTTATGCTAAGTGTTGGAAAAAACGTCTAGTGCTCTCATCCCCTTTCTTTGAGTCTAAACTTCTCATCTCCATTCTTATCTCTATCCTTAGTTACTTGTAATTTCAATATTTCCGATGTAATTGAGTAGTTTGAGTATTGCTATCAAGGTCTTGAAGTTGTAATTGTATGCCGATTCTCTTTTTAATATAGTGAGAAATTTGGGTGTGTTACACTAGCTTGAACGAATGTGAAATAATATTTGAATTTGTTGAATTGTGCAGGACATTAGGAGAGAGAGATGGGTGCTTACTGAAGAGGGGAAAACTTATGCTGCTGTAGGTTCTCCTGAATTTCAGCTTTTCTCAGCAGTACCACCGGAGGGAATTGCGCGGGAAGAGTTGCAGGTTGCAGAGTATTTGGTTTTTAGTGTATTTACTAAGTTTTTTTTTTCATGCGCTATTTCAGATTGCTTTTACATCAAACATTACAAAATTCTTTAATTTGTGAGCTCTCTTTTGACTAATGGCCTATCTGGATGCAGAAAAAATTGGATCCTGCAGTTTATAAAATTGGTTGCCAGCAAGCTATAAAGAACAAGTGGGTGGAGATGGCAAAGACACATGTCTCAAGGAAGGTAGTTTAATTTTTCTAATTTTATTTTATTTTATCGGAAGTGTACTTTTGCTCATTCTCCTCTGTATGTCTAATATATCATTCTTGTTATGACCACAGTTTTTTCAATTGATGAAAAACTGCACCTTCTCCCAATCCTTGCCTAAAACAAAATTTTATAACCTTTGGTACCAAAAAATTATTCCCTTGTTAAGCTTACTTCTTTGTTGCTTGAACGTCTCTCATTTGGAGTTGCTTATCTCTGCCTCTCACGCGTAATTCATTTTGATAGGTAGTAGTAGTATTCCTGTCTTTGCAACTTTTATTTTGTTTTTAACCTCATTCTACTTAAAAGTTTTTCACACTATCACAATTGACTTTCTTCTCCTATCCCTTCTACTTGAGCTTGTAAGTGCTAAACTATATCTTTACAACCATCCTGAAGATTAGGACCTAAGTGTCTCCAATACTTGAGAGCAAAATATGTGGAAATCTATGAGTAGCGACCCTTTTGCTGAAAGTTCTTTTTCGTGACCCTTCTGCTATAATCTTTTTCTTTAGAGAAAAGAGGTGAGATAAATGGATAAGTCTCATCATATGACCTTGCTTAATTGATGAATAGCAGTTTATCTGTTCCTTGATCCACAGTGGTTCTTGCTTGGGGGACTAGGGTAGTCAAATTATGAGGAATCCCCTCATGCTTGACAATGACCATGAAGGTCTGAAAAAGCCTTTATTACTTGCTTAGTAACGTGCCATTTCTAGCCTATACTCAACATTATTAAACAGTAATTGTTCCCTTGTGGCGGTTCCAGGATTTTTCTGTTTCTCCTTCTATGTTTTGTTGCTGGTTATTTGTTTGCCATCTACTTCAGTTTATAGCACGTGGCCTTCTTTTGTTTTACTGTTTCCTTTCCTTATCAATATATGTTGAATGAGGTCTCTGAGAGCTATAATGTAGAGGCAGCAAGGGAAGGTGACATCAACATGTGGTTATTTTAATATTTCTTACAGGGCTGCCTTTTAGTCTATTTGTTGACTTCATGTAGGTCCAACATGCTGATGACAAAGTTAAAAATTTGCTGTTGCGGATACAAAATGACGAGGTATATAGTTTGTAGCCAGTGGTTATCTTATTCCCCAACCCTTCACTTTTTGCTCACCTTTCTTCTTTACTGATAGCTCTCCTCCCACACAGGAAATTAGTTATGGTTTTTGTAGCTAGTTGACTATTATATTAATCAATTTGACTGTAACAAAGCAATGCTTTGCAGGCTGTCAATCAGGAGGATATTGATGCTCTAAAGCGAAGAAAACTAATAATTCAGCAGTAATTATCTATTCTTTAATATCCTTTCCCCAGCACTTGATATTTACAGGATGTAATCTCACAGTTACTAATACATATTCCAAATGCTGGTTCTTAAATATGTTTCTTACTGCTGCTCTTTCTAGGGTTTGGAAAGGAAATTCCGTAAGAAAAGGTCCCGAATATGCCCCAAAAAGGAAAAGAGCAGCGACTGATCTCACTCGAGAAAATTTACAGAGGTAACTTTCCGACTCATTTGGAAAGAAAAAACTGTTAGTTCCTGTAAAAAGATAGCTAAGTCATTCAGTCATGCGCACAGCTCGGGTTAAATTACTGGAAAAACTAGTATTTTGGAATGTGACAGTCAACTTAAGGATAGTGCCTGAATAGGGAATTTGTATCAATTGCCAAGGCATTTGGTAAATGCTCTATAATTTAATCAAACACCAAAAATTGATGGAGTTTGACATTGTTTTTGAGTTTGAGAAGTCCCTACGTGTGGATCTCCAGGAAAGTGTACTTTTTTAGCTTCTTCTTCAGATTCTAACTCTAGTACTTATGCTTCAGAGTTTCGACTGTCCTGGAGTTTCACATGTAGGATATTCAAACTCCAAGACAATGTGCTCGAGGCTCGAGCTTATTTGTGTTTTAGCTTTTAGAGTTTTTACTTCCACATTTCTACCAGTTTTCACATGTGGTCTGTTTTTCAATTACTAGTCAAAAAAGTGGACAGCACTTAGTATTTTTATGTATAAAAAACAAAACAAATTCATGGGCTGGGTAAATGGGAAAAGTTGCAATATGCAGTTTTCACTGATGGTTTCGGAGTACTCAATATTTATTTCATACAAACTAACGTGTTTGAATAATTAATCTAAGTAGGGATCCACTAATTCCATGATGGACGAAGCATTTAGTTTGTGTTCTAATTAACATATGTTGCTTGTTCTTTTCAAGGGGTGACTGGAAGGAATTGGAATTTAAAGAGTACAACTTCAGTGCTAAAGGTCAGCCAGTTGAAGGTGGCCATCTTCATCCATTGCTCAAGGCGTGTTTTGGTTCCCTTTTTCATTATTGATTGTGACCTTAAATTGATTTTCTTTCTGTTAGCTAACTGAGGCCAAATTTTCTTCCCTCACGTGTTGATTAAATCTTACCATCTTGTTGCAGGTTAGGCGGCAGGTACAAACAATTTTTCTTAATATGGGGTATGACTAAATGACCTTTTCTTGTGTCTATATATGGAGACTCTGTAAATGCATGTGTATAGATGAATGTGTCTATATATATATATTTAATTATTTATTTGGAAATTCTCTGTAGTGGACTGTAAGTGCAACATTTCATTTGAATTATGCAGGTTTGAGGAGATGCCAACGAATAATTATGTCGAAAGCAGGTAAGCTATTATTTATTTTGTTAGTCTTTTCCCCAGTCATAAATACAAGTGAGCCCTTCATTGATGGAACATCTTCCCAAAGTAAAAAGTTGTTAGGCTATATGAAATAACTGAACTAGGAAAATGGCACATCTCCTAGTCATTTTACTTTTATCTGAATAATTGGAGGGGAAATCTTCTTTGCATGACTCTTTGATAAGAGGTTGATATGTAAGTATTTTGAATCAAGCCCACTTTATCCTCCATTAGAGAAACATGTTTTGGCTGCTGTCATTTTACTTGCTAAAGTTCCTACTTCATGATACATAACAGTTTCAAAGTACCTCTTCTGTAGACCAATTTCTAAACACTATTTTTTCATGTTGAACATTCATGAGCTTCTGATGGTAAACAGTCACATTTATTGAAGATGGATGGTAAAATATAGCTATTCAATATTCATGAGCTTTCAAGCTCAAACTGATGGTAAACCATACATTTCACAATGTAATCCATTTAGGAGTCTTCTCTGGTTATAGCTAATGGTTATTTGTGCACTGTCATGTTCTCTAGTAAAAATTGTTAGGATATGTATTTGTTTGAATTCTTGTCAAAGAAGTATATGTTAATGTGGTTTGCAGTTTTTGGAATTTCGATGCACTTTTCCAGCCCCAACAGCACCCTGCCCGTGATTCACATGATACTTTCTTTTTGAAAGGTAAGTTTGAGTTTACATTTTACTGCCTCATCTGAGTTTCTTCTAATGAATTATTTGTTTGAATATAGTACCTTCCTCTACAAAGATGCTTCCAGAAGATTATGTTGAGCGGGTAAAAGAAATTCATGAATCTGGTGGTTACCAATCTAGGGGGTATGGTATTCAATGTCACTCACACTTATCAAGGTTTTGACGTTTCTATACTCAGTATTTAACAGTTCTTCTTGCTTAGATATGGGTATGATTGGAAAAGAGAGGAAGCGAACAAGAATCTTTTGCGGACACACACTACTGCTGTTTCGTCAAGAATGTTGTATGCATTAGCGAAGGTCCAAATGATTCACCATATCCAGAATCATCGTTTCATATATTAATTTTACTTATTGCATTTCAAACCTGTGTTATACATTATTGCAGAAGCCATTCGCCCCCAAGAAATACTATTCTATTGATCGTGTTTTCAGAAATGAAGCAGTTGATCGAACACATCTTGCTGAATTTCATCAGATAGAAGGTTGCTATATAGTTATACAAATTTCGTGTCACTCATGTTTTCCGGTTCCTTGATATATTTTTTTTCTTCTCTTGTTCTTCCGCGGTACCAAACCTTTAGCTCAGATAGACACTGGTCCTTGAAGTGCCAGCAAAACTGATTTATCATCCCAAGTCCCAACTACTGGTTGAATTCCTCATAGTAGAATTATAATGAGCTGTGCTTTAGATACTTTATGAACATTGGTTTGGTTTCTGTTTTAGGTTGGAAAAGTAGGGAATACTGAAGAGTATTTCTGTTTCTTACTATGACAGCACATTATCAACGAGCCAATACCCCTCTTGACATATGACAATTAGGGTGCAGTTTGGTTCACATGCTTATTATACAAGGATCGTTACATGAATAATGATGTAGGAATTGTTATATGGTGAATAATAATTACATTACATGGATTGTTTTTTAGAGATTGTCAACTTTAAGGGGTCTTCAGATATGCTTATTCCACTTCTTCATGCATAAATTTTCGCATGAGTGGTGTTAGCAAGTATAGATTGATACAGTCTAACCACTGTATAAGTTATCTACTAGTTCTATACTGAAAACCAAATGTTGTGTTTGTTATACAAAGCTTTAATTAGCAATTCAGAGTTTTATGCCATAAACCAAATGTTACACACACTTCCCTTTAACTCAAAAGACTTCTCTATACTATTTATTCTGTACTGTAGGTGATTACAACGCCAATATGTGGCTTTAGGGTATTCGTTTCATAGCTCTTACTACTTGTGTTGAACTCTGTGTTAGGTAGTACTGTAAGTAAAACTTATTCTTTGTTACACTTTATCCTGTTAACAGTTCCATGAACATATTGTCATGGTTTCTTATTCCAGGTTTAATATGTGATCGTGGACTCACTCTTGGTGACCTGATTGGTGTTCTTCATGACTTCTTTTCTCGTCTAGGTGACCAACTACCACTGTGCTTGTATTCGTGCTTATGTTCTATGTTTTAGTACATCAATGTTTGCTCAAGCCTTGGTCTCATAGAAAAGATAAAGCTTGCATTGGTATCACGTCCAACTCATTTACATGAGCTCTTAATTATGAGAGGGCTAATTAGTGGTCTACTTTTCTTTTTCTAATTACAGGAATGTCCAAGCTTCGGTTCAAACCTGCTTATAACCCTTATACTGAGCCCAGCATGGAAATTTTCAGGTTGTAGTAATATCTTTAATGTAAATACACAATTGTTCAACTCTGCATTAATGTCATCATATCCTTTTGTTTTGTCAGCTACCATGAAGGCTTTAAGAAATGGGTAGAAGTTGGAAATTCTGGTATGTTTAGGCCTGAAATGCTTCTTCCTATGGGTCTGCCAGAAGATGTTCGGGTTATTGCCTGGGGCCTTTCCCTTGAGAGGTATACAATCTGTTAACAGCAACATGTTCTTATTTATAAATTAAAACTAACTTCTTGTACCTATGTTGCTGGGCGGTATTGATATAAGTGGGAGTTGTTTGTATGTTTGAACTTATTAGTTATTAAACCTGTAAGGAGAACTGTTAACCATAGTAAAGCCACACTAGTCTGCATTATTTTCTTCACTCAAAGTTTATGTGTACCTGCGAAGTATCTATCTTGTGCAAACACGGGATAGTTAAATGCTCTAGGTTTGAACTTTGGATCATTAGCCTGCTTTTTTAGTTGCAAGTTGGAGAGGTTTGTGGCATAACAGAATTAGGTCCCAAGAGTAGTAAAAGGTATCAGTTCGTTTTTGGTGTCACTCCAAGTTAACTGCTGAAAAGTTGAAAGCCTCAACCACTTAGGTTCTCTCTCAGCAATGCTTGCAATAGTTTCTGACTGATTATTGCAATTCTTGCTAGTTGACAGATTGTAAGTCGTCTCTTAGTGTAGCTGCAGTTATTTGCGGGACTTAGAAATGTGACCAAGATAGAAAAGAGAATTAAGGGGGTGGGGAGGGAGAGAGAGAAAAGGGACTATGGGCTGGTAATTAACGTGACCGGAGTAGCTGATTGTGGTTGAATTACCACAAGGGAGGGGAGCAGAGGGTAGATATGGTCTCTTTGTTGGTTTAGATTGCACTGTTGACAAGAATGTATCATTGAATCTGTAATTCGAAATACCTGGGGTGTTGTGTAAAATCTATATTGGGCATTTCATGTAATGAAATTATGTTCACATGTTATTTTACTTGTCTTCGTGCACCAGGCCCACCATGATTCTCTACGGAATTGACAACATCAGAGATCTTTTTGGTCCCAAGGTATAATTGGCACTTCGGTGATTAACTGCGGTACAATTTCTCAGCGATGTCAATGTTTGACCTTGTTCTTTTTTCTTTTTGCAGGTGGATCTAGGTCTCATCAAAAGAAACCCAATATGCCGGCTTGGACTTTAGTAATACAGCATTTTTGACTCTGCTGGGCAATAAAGTTGAGATGAAATTTTTCTGCTGGGAAGTCTAAGTTGAGATCATTTATTTACA</genome_strand>
        <mrna_strand>AGTATGGCAGATGAAGCGGAAGATGCCATATTGGCATATCTCAAAGACAACGATGAGATTTCAAATTCTGCTAACTTTGCTCAGGATTTGGGTTTTAGCCATGACGACATTGTCAATGTTATTCGCAGACTCCATGGATTTCGACTTGTGGATGCTAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACATTAGGAGAGAGAGATGGGTGCTTACTGAAGAGGGGAAAACTTATGCTGCTGTAGGTTCACCAGAATTTCAGCTTTTCTCAGCAGTACCATCGGAGGGAATTGCGAGGGAAGATTTGCAG.........................................................................................................................................AAAAAATTGGATCCTGCAGTTTATAAAATTGGTTGTCAGCAAGCTATAAAGAACAAGTGGGTGGAGATGGCAAAGACTCATGTCTCAAAGAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCAACATGCTGATGACAAAGTTAAAAATTTGCTGTTGCGGATACAAAATGACGAG........................................................................................................................................................................GCTGTCAATCAGGAGGATATTGATGCTCTAAAGCGAAGAAAACTAATAATTCAGCA.............................................................................................................................GGTTTGGAAAGGAAATTCCGTAAGAAAAGGTCCCGAATATGCCCCAAAAAGGAAAAGAGCAGCCACTGATCTCACTCGGGAAAATTTACAGAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGTGATTGGAAGGAATTGGAATTTAAAGAGTACAACTTCAGTGCTAAAGGTCAGCCTGTCGAAGGCGGCCATCTTCATCCATTGCTCAAG..........................................................................................................................GTTAGGCGGCAGGTACAAACGATTTTTCTTAATATGGG........................................................................................................................................................GTTTGAGGAGATGCCAACAAATAATTATGTCGAAAGCAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTGGAACTTCGATGCACTTTTCCAGCCCCAACAGCACCCTGCCCGTGATTCACATGATACTTTCTTTTTGAAAG....................................................................TGCCTTCCTCTACAAAGATGCTGCCAGAAGATTATGTTGAGCGGGTAAAAGAAATTCATGAATCTGGTGGTTACCAATCTAGGGG...............................................................................ATATGGGTATGATTGGAAAAGAGAGGAAGCGAACAAGAATCTTTTGCGGACACACACTACTGCTGTATCGTCAAGAATGTTGTATGCATTAGCGCAG........................................................................................AAGCCATTCGCCCCCAAGAAATACTATTCTATTGATCGTGTTTTCAGAAATGAAGCAGTTGATCGAACACATCTTGCTGAATTTCATCAGATAGAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTAATATGTGATCGTGGACTCACTCTTGGTGACCTGATTGGTGTTCTTCATGACTTCTTTTCTCGTCTAG.........................................................................................................................................................................................GAATGTCCAAGCTTCGGTTCAAACCTGCTTATAATCCTTATACTGAGCCCAGCATGGAAATTTTCAG..............................................................................CTACCATGAAGGCTTTAAGAAATGGGTGGAAGTTGGAAATTCTGGTATGTTTAGGCCTGAAATGCTTCTTCCTATGGGTCTGCCAGAAGATGTTCGTGTTATTGCCTGGGGCCTTTCCCTTGAGAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCAACGATGATTCTCTACGGAATTGACAACATCAGAGATCTTTTTGGTCCCAAG....................................................................................GTGGATCTAGGTCTCATCAAAAGAAATCCAATATGCCGGCTTGGACTTTAGTAATACAGCATCATACTCTGTCACATTGTTTATGGTTGAGATCAGATTTTTCTGCTGCTCAATC-AAGTTGAGGTCATTTCTTTACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0012A12-ClXVT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U571623" ref_strand="+" ref_description="SGN-U571623 Tomato 200607#2 [16 ESTs aligned] (*GB) gi|157340823|emb|CAO47628.1| (e_value=3e-131) unnamed; (*ATH) AT4G39280.1 (e_value=2e-133)  Symbol: None | phenylalanyl-tRNA synthetase, putative / phenylalanine--tRNA ligase, putative, similar to SP:Q9Y285 Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20) (Phenylalanine- -tRNA ligase alpha chain) (PheRS) {Homo sapiens}; contains Pfam... ; (*SWP) sp|Q9T034|SYFA_ARATH (e_value=2e-132) Probable phenylalanyl-tRNA synthetase alpha chain OS=Arabidopsis thaliana GN=At4g39280; ">
      <seq>gttttggctgctgtcattttacttgctaaagttcctacttcatgatacataacagtttcaaagtacctcttctgtagaccaatttctaaacactattttttcatgttgaacattcatgagcttctgatggtaaacagtcacatttattgaagatggatggtaaaatatagctattcaatattcatgagctttcaagctcaaactgatggtaaaccatacatttcacaatgtaatccatttaggagtcttctctggttatagctaatggttatttgtgcactgtcatgttctctagtaaaaattgttaggatatgtatttgtttgaattcttgtcaaagaagtatatgttaatgtggtttgcagtttttggaatttcgatgcacttttccagccccaacagcaccctgcccgtgattcacatgatactttctttttgaaagtaccttcctctacaaagatgcttccagaagattatgttgagcgggtaaaagaaattcatgaatctggtggttaccaatctaggggatatgggtatgattggaaaagagaggaagcgaacaagaatcttttgcggacacacactactgctgtttcgtcaagaatgttgtatgcattagcgaagaagccattcgcccccaaaaaatactattctattgatcgtgttttcagaaatgaagcagttgatcgaacacatcttgctgaatttcatcagatagaaggtttaatatgtgatcgtggactcactcttggtgacctgattggtgttcttcatgacttcttttctcgtctaggaatgtccaagcttcggttcaaacctgcttataacccttatactgagcccagcatggaaattttcagctaccatgaaggctttaagaaatgggtagaagttggaaattctggtatgtttaggcctgaaatgcttcttcctatgggtctgccagaagatgttcgggttattgcctggggcctttcccttgagaggcccaccatgattctctacggaattgacaacatcagagatctttttggtcccaaggtggatctaggtctcatcaaaagaaacccaatatgccggcttggactttagtaatacagcatttttgactctgctgggcaataaagttgagatgaaatttttctgctgggaagtctaagttgagatcatttatttacaatgggaggattcttgccgatatttgatcgtagatgttttttgttgatacaaatgtgaagattaaatatcagatcggaggacgcactatatacaagtttcttgatgttatatctaaatttagtcccttcaatatacttattttgggtatctaaggacaggttgttgatacgagtgttgctgctccttgaatcaatgacattaactcaaatgagtataatatatctctcccaaacacttctatctttaatgcattcaagctctcgtataaattagttgggatagtgaatcatttgttcctgtctagacaatgtcgacttcttgaaatttataatatgcagatgtagtttgcttgtttttct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0012A12-ClXVT/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0012A12.1" temp_strand="+" temp_description="C02HBa0012A12.1  AC215355.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0012A12 sequenced_by:kribb upload_account_name:korea">
        <position start="62843" stop="67241"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="63143" g_stop="63582" g_length="440"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="440" r_length="440" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="63583" i_stop="63650" i_length="68">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.868" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63651" g_stop="63735" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="441" r_stop="525" r_length="85" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63736" i_stop="63814" i_length="79">
            <donor d_prob="0.945" d_score="1.00"/>
            <acceptor a_prob="0.964" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="63815" g_stop="63911" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="526" r_stop="622" r_length="97" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="63912" i_stop="63999" i_length="88">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.977" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="64000" g_stop="64096" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="623" r_stop="719" r_length="97" r_score="0.990"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="64097" i_stop="64968" i_length="872">
            <donor d_prob="0.945" d_score="1.00"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="64969" g_stop="65040" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="720" r_stop="791" r_length="72" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="65041" i_stop="65225" i_length="185">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="65226" g_stop="65292" g_length="67"/>
          <reference_exon_boundary r_type="cDNA" r_start="792" r_stop="858" r_length="67" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="65293" i_stop="65370" i_length="78">
            <donor d_prob="0.887" d_score="1.00"/>
            <acceptor a_prob="0.977" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="65371" g_stop="65496" g_length="126"/>
          <reference_exon_boundary r_type="cDNA" r_start="859" r_stop="984" r_length="126" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="65497" i_stop="66306" i_length="810">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="66307" g_stop="66361" g_length="55"/>
          <reference_exon_boundary r_type="cDNA" r_start="985" r_stop="1039" r_length="55" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="66362" i_stop="66445" i_length="84">
            <donor d_prob="0.883" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="66446" g_stop="66942" g_length="497"/>
          <reference_exon_boundary r_type="cDNA" r_start="1040" r_stop="1536" r_length="497" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0012A12.1" gen_strand="+" ref_id="SGN-U571623" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>1536</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0012A12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U571623" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="63143" e_stop="63582"/>
          <exon e_start="63651" e_stop="63735"/>
          <exon e_start="63815" e_stop="63911"/>
          <exon e_start="64000" e_stop="64096"/>
          <exon e_start="64969" e_stop="65040"/>
          <exon e_start="65226" e_stop="65292"/>
          <exon e_start="65371" e_stop="65496"/>
          <exon e_start="66307" e_stop="66361"/>
          <exon e_start="66446" e_stop="66942"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTTGGCTGCTGTCATTTTACTTGCTAAAGTTCCTACTTCATGATACATAACAGTTTCAAAGTACCTCTTCTGTAGACCAATTTCTAAACACTATTTTTTCATGTTGAACATTCATGAGCTTCTGATGGTAAACAGTCACATTTATTGAAGATGGATGGTAAAATATAGCTATTCAATATTCATGAGCTTTCAAGCTCAAACTGATGGTAAACCATACATTTCACAATGTAATCCATTTAGGAGTCTTCTCTGGTTATAGCTAATGGTTATTTGTGCACTGTCATGTTCTCTAGTAAAAATTGTTAGGATATGTATTTGTTTGAATTCTTGTCAAAGAAGTATATGTTAATGTGGTTTGCAGTTTTTGGAATTTCGATGCACTTTTCCAGCCCCAACAGCACCCTGCCCGTGATTCACATGATACTTTCTTTTTGAAAGGTAAGTTTGAGTTTACATTTTACTGCCTCATCTGAGTTTCTTCTAATGAATTATTTGTTTGAATATAGTACCTTCCTCTACAAAGATGCTTCCAGAAGATTATGTTGAGCGGGTAAAAGAAATTCATGAATCTGGTGGTTACCAATCTAGGGGGTATGGTATTCAATGTCACTCACACTTATCAAGGTTTTGACGTTTCTATACTCAGTATTTAACAGTTCTTCTTGCTTAGATATGGGTATGATTGGAAAAGAGAGGAAGCGAACAAGAATCTTTTGCGGACACACACTACTGCTGTTTCGTCAAGAATGTTGTATGCATTAGCGAAGGTCCAAATGATTCACCATATCCAGAATCATCGTTTCATATATTAATTTTACTTATTGCATTTCAAACCTGTGTTATACATTATTGCAGAAGCCATTCGCCCCCAAGAAATACTATTCTATTGATCGTGTTTTCAGAAATGAAGCAGTTGATCGAACACATCTTGCTGAATTTCATCAGATAGAAGGTTGCTATATAGTTATACAAATTTCGTGTCACTCATGTTTTCCGGTTCCTTGATATATTTTTTTTCTTCTCTTGTTCTTCCGCGGTACCAAACCTTTAGCTCAGATAGACACTGGTCCTTGAAGTGCCAGCAAAACTGATTTATCATCCCAAGTCCCAACTACTGGTTGAATTCCTCATAGTAGAATTATAATGAGCTGTGCTTTAGATACTTTATGAACATTGGTTTGGTTTCTGTTTTAGGTTGGAAAAGTAGGGAATACTGAAGAGTATTTCTGTTTCTTACTATGACAGCACATTATCAACGAGCCAATACCCCTCTTGACATATGACAATTAGGGTGCAGTTTGGTTCACATGCTTATTATACAAGGATCGTTACATGAATAATGATGTAGGAATTGTTATATGGTGAATAATAATTACATTACATGGATTGTTTTTTAGAGATTGTCAACTTTAAGGGGTCTTCAGATATGCTTATTCCACTTCTTCATGCATAAATTTTCGCATGAGTGGTGTTAGCAAGTATAGATTGATACAGTCTAACCACTGTATAAGTTATCTACTAGTTCTATACTGAAAACCAAATGTTGTGTTTGTTATACAAAGCTTTAATTAGCAATTCAGAGTTTTATGCCATAAACCAAATGTTACACACACTTCCCTTTAACTCAAAAGACTTCTCTATACTATTTATTCTGTACTGTAGGTGATTACAACGCCAATATGTGGCTTTAGGGTATTCGTTTCATAGCTCTTACTACTTGTGTTGAACTCTGTGTTAGGTAGTACTGTAAGTAAAACTTATTCTTTGTTACACTTTATCCTGTTAACAGTTCCATGAACATATTGTCATGGTTTCTTATTCCAGGTTTAATATGTGATCGTGGACTCACTCTTGGTGACCTGATTGGTGTTCTTCATGACTTCTTTTCTCGTCTAGGTGACCAACTACCACTGTGCTTGTATTCGTGCTTATGTTCTATGTTTTAGTACATCAATGTTTGCTCAAGCCTTGGTCTCATAGAAAAGATAAAGCTTGCATTGGTATCACGTCCAACTCATTTACATGAGCTCTTAATTATGAGAGGGCTAATTAGTGGTCTACTTTTCTTTTTCTAATTACAGGAATGTCCAAGCTTCGGTTCAAACCTGCTTATAACCCTTATACTGAGCCCAGCATGGAAATTTTCAGGTTGTAGTAATATCTTTAATGTAAATACACAATTGTTCAACTCTGCATTAATGTCATCATATCCTTTTGTTTTGTCAGCTACCATGAAGGCTTTAAGAAATGGGTAGAAGTTGGAAATTCTGGTATGTTTAGGCCTGAAATGCTTCTTCCTATGGGTCTGCCAGAAGATGTTCGGGTTATTGCCTGGGGCCTTTCCCTTGAGAGGTATACAATCTGTTAACAGCAACATGTTCTTATTTATAAATTAAAACTAACTTCTTGTACCTATGTTGCTGGGCGGTATTGATATAAGTGGGAGTTGTTTGTATGTTTGAACTTATTAGTTATTAAACCTGTAAGGAGAACTGTTAACCATAGTAAAGCCACACTAGTCTGCATTATTTTCTTCACTCAAAGTTTATGTGTACCTGCGAAGTATCTATCTTGTGCAAACACGGGATAGTTAAATGCTCTAGGTTTGAACTTTGGATCATTAGCCTGCTTTTTTAGTTGCAAGTTGGAGAGGTTTGTGGCATAACAGAATTAGGTCCCAAGAGTAGTAAAAGGTATCAGTTCGTTTTTGGTGTCACTCCAAGTTAACTGCTGAAAAGTTGAAAGCCTCAACCACTTAGGTTCTCTCTCAGCAATGCTTGCAATAGTTTCTGACTGATTATTGCAATTCTTGCTAGTTGACAGATTGTAAGTCGTCTCTTAGTGTAGCTGCAGTTATTTGCGGGACTTAGAAATGTGACCAAGATAGAAAAGAGAATTAAGGGGGTGGGGAGGGAGAGAGAGAAAAGGGACTATGGGCTGGTAATTAACGTGACCGGAGTAGCTGATTGTGGTTGAATTACCACAAGGGAGGGGAGCAGAGGGTAGATATGGTCTCTTTGTTGGTTTAGATTGCACTGTTGACAAGAATGTATCATTGAATCTGTAATTCGAAATACCTGGGGTGTTGTGTAAAATCTATATTGGGCATTTCATGTAATGAAATTATGTTCACATGTTATTTTACTTGTCTTCGTGCACCAGGCCCACCATGATTCTCTACGGAATTGACAACATCAGAGATCTTTTTGGTCCCAAGGTATAATTGGCACTTCGGTGATTAACTGCGGTACAATTTCTCAGCGATGTCAATGTTTGACCTTGTTCTTTTTTCTTTTTGCAGGTGGATCTAGGTCTCATCAAAAGAAACCCAATATGCCGGCTTGGACTTTAGTAATACAGCATTTTTGACTCTGCTGGGCAATAAAGTTGAGATGAAATTTTTCTGCTGGGAAGTCTAAGTTGAGATCATTTATTTACAATGGGAGGATTCTTGCCGATATTTGATCGTAGATGTTTTTTGTTGATACAAATGTGAAGATTAAATATCAGATCGGAGGACGCACTATATACAAGTTTCTTGATGTTATATCTAAATTTAGTCCCTTCAATATACTTATTTTGGGTATCTAAGGACAGGTTGTTGATACGAGTGTTGCTGCTCCTTGAATCAATGACATTAACTCAAATGAGTATAATATATCTCTCCCAAACACTTCTATCTTTAATGCATTCAAGCTCTCGTATAAATTAGTTGGGATAGTGAATCATTTGTTCCTGTCTAGACAATGTCGACTTCTTGAAATTTATAATATGCAGATGTAGTTTGCTTGTTTTTCA</genome_strand>
        <mrna_strand>GTTTTGGCTGCTGTCATTTTACTTGCTAAAGTTCCTACTTCATGATACATAACAGTTTCAAAGTACCTCTTCTGTAGACCAATTTCTAAACACTATTTTTTCATGTTGAACATTCATGAGCTTCTGATGGTAAACAGTCACATTTATTGAAGATGGATGGTAAAATATAGCTATTCAATATTCATGAGCTTTCAAGCTCAAACTGATGGTAAACCATACATTTCACAATGTAATCCATTTAGGAGTCTTCTCTGGTTATAGCTAATGGTTATTTGTGCACTGTCATGTTCTCTAGTAAAAATTGTTAGGATATGTATTTGTTTGAATTCTTGTCAAAGAAGTATATGTTAATGTGGTTTGCAGTTTTTGGAATTTCGATGCACTTTTCCAGCCCCAACAGCACCCTGCCCGTGATTCACATGATACTTTCTTTTTGAAAG....................................................................TACCTTCCTCTACAAAGATGCTTCCAGAAGATTATGTTGAGCGGGTAAAAGAAATTCATGAATCTGGTGGTTACCAATCTAGGGG...............................................................................ATATGGGTATGATTGGAAAAGAGAGGAAGCGAACAAGAATCTTTTGCGGACACACACTACTGCTGTTTCGTCAAGAATGTTGTATGCATTAGCGAAG........................................................................................AAGCCATTCGCCCCCAAAAAATACTATTCTATTGATCGTGTTTTCAGAAATGAAGCAGTTGATCGAACACATCTTGCTGAATTTCATCAGATAGAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTAATATGTGATCGTGGACTCACTCTTGGTGACCTGATTGGTGTTCTTCATGACTTCTTTTCTCGTCTAG.........................................................................................................................................................................................GAATGTCCAAGCTTCGGTTCAAACCTGCTTATAACCCTTATACTGAGCCCAGCATGGAAATTTTCAG..............................................................................CTACCATGAAGGCTTTAAGAAATGGGTAGAAGTTGGAAATTCTGGTATGTTTAGGCCTGAAATGCTTCTTCCTATGGGTCTGCCAGAAGATGTTCGGGTTATTGCCTGGGGCCTTTCCCTTGAGAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCACCATGATTCTCTACGGAATTGACAACATCAGAGATCTTTTTGGTCCCAAG....................................................................................GTGGATCTAGGTCTCATCAAAAGAAACCCAATATGCCGGCTTGGACTTTAGTAATACAGCATTTTTGACTCTGCTGGGCAATAAAGTTGAGATGAAATTTTTCTGCTGGGAAGTCTAAGTTGAGATCATTTATTTACAATGGGAGGATTCTTGCCGATATTTGATCGTAGATGTTTTTTGTTGATACAAATGTGAAGATTAAATATCAGATCGGAGGACGCACTATATACAAGTTTCTTGATGTTATATCTAAATTTAGTCCCTTCAATATACTTATTTTGGGTATCTAAGGACAGGTTGTTGATACGAGTGTTGCTGCTCCTTGAATCAATGACATTAACTCAAATGAGTATAATATATCTCTCCCAAACACTTCTATCTTTAATGCATTCAAGCTCTCGTATAAATTAGTTGGGATAGTGAATCATTTGTTCCTGTCTAGACAATGTCGACTTCTTGAAATTTATAATATGCAGATGTAGTTTGCTTGTTTTTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0012A12-ClXVT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U577802" ref_strand="+" ref_description="SGN-U577802 Tomato 200607#2 [5 ESTs aligned] (*GB) gi|157345121|emb|CAO71849.1| (e_value=1e-42) unnamed; (*ATH) AT4G36980.1 (e_value=5e-37) | Symbol: None | expressed protein | chr4:17433639-17437057 REVERSE | Aliases: AP22.35, AP22_35; ">
      <seq>gcgatagagaagctgcccgtattaccggtagtagagttcttcatcatgatccctatcgtgaatctcgtcgaagtccgacatatgaagcttattcacgttccagaagatccaggtcaaggtctctctcatactcccctccccattcaaggcgctacgaacgtggaggcaaatctgatgatatttaccaaggcaaagaaagaactccgaagatagagtatattactgaatttggtggcgcagatgatgagaacaagcctaaagttgaaggatattctccaccaccatctcctccacctcgaactgatccattaagccggccatcaactggtcgtattcttgaggccctccatgtagatcctgcatctggggtatctattgataaggataagagtggccaaatgttgaaaacaccaacaagtgcgtcttcagcactatctaagttgaacaagacaactagtagttcaagtctctctaaacagcagggtgaaaagaaggaaacacctcaggagagacttaagcggattatgagcaaacaattgaacaaacaaatcaagaaagatacagctattgaaactgccaagaaaagagaacaagagaaacagaggcttgaaaagctggcagagacaagccgggtaagccggtatcgtcgccgaagccgtagtagaagttacagccgttcccctcgaaggcatcgacgtagccggagtcccagcagagaaaggagttctcgtagatatcgctcacgttcaaggtctggctcacggtcgcgcactcactcttgctcacattcgccttcgcattctcactccagttcacgctctctttctcgttccatttcccggtctcgttcacctcgtaggagacgatcaagatactgatactacaggcatgaacgagtgttagctgtgggcgatatatattactgatgtattgttgtactggtaaacttatagctgaagctgaatttgggttgatgatgtgaagttttattcatgagttgtgtttattgtttttggttgctttttgaacttgctgaagaatatttagcgtgacaattatattatttcagctcctttagtaggatgatgcatcattccagtaaaaaaaaaaaaaaaaatcccgagggggggcccggaccccatttccccctatagggagccaaataaaaaaaaaactcgggggggggcccggtccccatttccccctataggga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0012A12-ClXVT/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0012A12.1" temp_strand="-" temp_description="C02HBa0012A12.1  AC215355.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0012A12 sequenced_by:kribb upload_account_name:korea">
        <position start="71922" stop="67100"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="71622" g_stop="71565" g_length="58"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="58" r_length="58" r_score="0.966"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="71564" i_stop="71465" i_length="100">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.770" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="71464" g_stop="71417" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="59" r_stop="106" r_length="48" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="71416" i_stop="71331" i_length="86">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.274" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="71330" g_stop="71121" g_length="210"/>
          <reference_exon_boundary r_type="cDNA" r_start="107" r_stop="316" r_length="210" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="71120" i_stop="70891" i_length="230">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="70890" g_stop="70789" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="317" r_stop="418" r_length="102" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="70788" i_stop="70645" i_length="144">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="70644" g_stop="70514" g_length="131"/>
          <reference_exon_boundary r_type="cDNA" r_start="419" r_stop="549" r_length="131" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="70513" i_stop="70363" i_length="151">
            <donor d_prob="0.337" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="70362" g_stop="70224" g_length="139"/>
          <reference_exon_boundary r_type="cDNA" r_start="550" r_stop="688" r_length="139" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="70223" i_stop="67885" i_length="2339">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="67884" g_stop="67717" g_length="168"/>
          <reference_exon_boundary r_type="cDNA" r_start="689" r_stop="856" r_length="168" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="67716" i_stop="67645" i_length="72">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.692" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="67644" g_stop="67400" g_length="245"/>
          <reference_exon_boundary r_type="cDNA" r_start="857" r_stop="1101" r_length="245" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="1163" polyA_stop="1174"/>
      <MATCH_line gen_id="C02HBa0012A12.1" gen_strand="-" ref_id="SGN-U577802" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>1101</cumulative_length_of_scored_exons>
        <coverage percentage="0.908" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0012A12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U577802" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="71622" e_stop="71565"/>
          <exon e_start="71464" e_stop="71417"/>
          <exon e_start="71330" e_stop="71121"/>
          <exon e_start="70890" e_stop="70789"/>
          <exon e_start="70644" e_stop="70514"/>
          <exon e_start="70362" e_stop="70224"/>
          <exon e_start="67884" e_stop="67717"/>
          <exon e_start="67644" e_stop="67400"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGGAAAGAGAAGCTGCCCGTATTACCGGTAGTAGAGTTCTTCATCATGATCCCTATCGGTACTTTAGTTCTTTTGCTTCTATCACACTTACTCGTGTATACTTAAAGTCAGGTTACTTGACTTGTTCGCTCACTCTGTTTTCTCTACCTCTTATGCAGTGAATCTCGTCGAAGTCCGACATATGAAGCTTATTCACGTTCCAGAAGGTTTCTTATCTTTTATATTTTATTTATGCACTTTTAAATGGCCAGTGGTCTTCCTAATGTTGCTTTAATCATTTTTCCATCTGCAGATCCAGGTCAAGGTCTCTCTCATACTCCCCTCCCCATTCAAGGCGCTACGAACGTGGAGGCAAATCTGATGATATTTACCAAGGCAAAGAAAGAACTCCGAAGATAGAGTATATTACTGAATTTGGTGGCGCAGATGATGAGAACAAGCCTAAAGTTGAAGGATATTCTCCACCACCATCTCCTCCACCTCGAACTGATCCATTAAGCCGGTCGGAGCACTTGACCTTTTATTCTTGCAAAGCTAGATTGGACAGTCTTTTCTCTGCTGCAGCTTTTCATCCATTTGTTAGCTGAGGAACTTAATGTGGTTTAGAATATATCACCATTTACACCTGTTCGAATAACTGTCAAGGGGAAGAGGGAGCAAGTCTCCATTTTCACTGTTCAGTTTGCATGATAACATGAAACATTTCTTGTTTAAAATCTCACTTTTCTGCAGGCCATCAACTGGTCGTATTCTTGAGGCCCTCCATGTAGATCCTGCATCTGGGGTATCTATTGATAAGGATAAGAGTGGCCAAATGTTGAAAACACCAACAAGGTGCATATTCTAACACCCTTCCACTTTCTGGTTATTTGACTGTTTGTTCTTTCCCTTCCCCACATATTTGTTTGTGCTTGTGTATGTGTCTCCTTAAAAAACAAACCAGTTACTAATTTGTACTCCCTTTTTTGGTCTTGGCAGTGCGTCTTCAGCACTATCTAAGTTGAACAAGACAACTAGTAGTTCAAGTCTCTCTAAACAGCAGGGTGAAAAGAAGGAAACACCTCAGGAGAGACTTAAGCGGATTATGAGCAAACAATTGAACAAACAAAGTATACATTACTTCATGTGCATCTCAGGAGTGATGTGTTTGTCTTCAATAATGTGCTGCATGCATCAATATAACAAGAATTAGGACTTATTGTTGCATGCATGTTTGCATACATTGGGTTGTACATTTTACCTAACTGATGTGTTTTGCAGTCAAGAAAGATACAGCTATTGAAACTGCCAAGAAAAGAGAACAAGAGAAACAGAGGCTTGAAAAGCTGGCAGAGACAAGCCGGGTAAGCCGGTATCGTCGCCGAAGCCGTAGTAGAAGTTACAGCCGTTCCCCTCGAAGGTACTAATGCTCAGCCTTTTTGTTATACTGTTTTTGATGTTTAGGAGAGTTGAATTTGTCGGAAGTAAACATTGTCTTGCCGGAGTTGATGATGATCTAATGTTCCTTACCTTTTCTCCTTGTTTCTTCCTTAATGGAAAGCGATTTCTGAATTTCTTGATTAGAAATTGAGTGATGACTGTCTACAAGTTGCATGCTAGTGGACTAGAGGCCGTCATTCCCGTCTAGAATGTTTGCTCGACTATTCACGTAGGTAACTTTTGTAATTTTCTTTACGGCTAACCTATTGTAGGTTCGGTGGTTTGGTGGGGGAGTAACTAAAGAGTAGATGAATTAAAATGGGTTGAGATCATATTGACTTTTCAAATAATTCGGTACTGAGGGTTAACTTAAAACAAGATTAACCTACCATTAAATTAAAGCTGTCTTCAGTTGTTGGTTCACTTCTGTTCCTTGCAGCAAGCATGCATGCACAGCTCCCTTCAGCCTTTAGTCTTCATCTGCATCTCCATCTCTCGTCAGTGTTACTTTTGGTGAAACTTTTTCAAAGAGTTCTGAAATCAAAGCTGCTCTTGATCCGTCAATATCAGAAATTTGAGATCCCTAACCTACTTAGCAGAAGACAAATCCCGGATAAACTGTGCCTCAAGTTTGTTCTCCATGGATTTTGTGATATTGAGGATTTGTTTTCTGTCTGTTGGGAACATGTAACCTTTAATAGAGCTGGCTTAGAATTGGACGAGGGGTGATGCCATTCAAAAACTGGTCCTTGATTTTTTGAAGTTAAGTATGTGAGTCTGTATTTTTTTTCCTTTTCTTTTGGGTGGTGGGGGTGTAGTCGAAGTAATGGACTGAAAAGGGAGTAGGCATTTGTTTGTTTTTCTTTCAAAATGCATTTGTTGTTGTCTGATGGAGAAGTCACATTTGAGCTCGTAACAAACTCGAAAAAAAAAAAGTAGAGAGTTGATTTTATTTGAGAAAAATACTGCTTAAGTTAAGGAATTCCTATTGTTCAGATGGAGAAAGATAAGTCGGGCGGAGTGGATCCATGGCAGGGGTCGTTAGAATGATCCTTTTGCATAAGCGTACGTTGGCGGTCCCTCTAGTGGGGGATTCCTATAGGGGTAGGGGTTAAGAATGTCCTCTTTCATAGGTTTCCGAAGAAAGGGATGAAAACACATTAGCTTTTAAACCTGAGTTTGGTGTGCCTTGAAGAGCCGAGAACTTCACGGACACTATCAATATCTATATCTGAGTGAGGAGTCGTAATTGATTAGAAAGTGGCTTTCTTCACTTTAGGAGCCACCGCAATCTATTTTGATAATCCAAACCAAGATAGATATATCCTAACCAAATAATCACCATGATCAGGCTTTGCCCTTACGTGTTTTCATAATACCGTAGGTATGATCTTGGGAATACCACATCGGGTCAATGAAACTGGAAAAGACGTGCTTGTTTCATTTGTTGGTGGACTCCTAGATGTAGTGTGAATCAGCCACTAATTTCCATGTTCTTTTAGAACAAAATTAATGGTTTTAAAAATTACATTAATGTACTGGAAAATGACATTCTATAATTAGTAGGACTACAAATGTTTGAAAAACTTGTACGGTAAAGTTGGGTGTTTCAGTTGAGATTGTTTTCTAATCAAGAAAAAATTTATCAATCCTAATAACTTAATGTTATGTATAGTGGGATAGAGGAAATGTCAAGGAGAAGTGCAGGAGAACATTATTGCTTGCGCTTGCATTCTTGGGGGAATGCAGACCAAAGTATGTGGTTAGATAGTTGTCGAGTGTTTGTTGAACCATTCTGCAGTTTCTGTTGATACACGGGCATGGATGTAGTTTTCTGTTTATGATTTGAGTTGGACGAGTTGAGTTATGACCCGTTGCTGCTCTATACTGAACTTAACCCACTTTGGCCCAAGCAAAAATATGGATGTTCAGGTAGATCAGTTCAATTACTCAACCCGTTTAACCCCTTCCCATTTGGCAACCTAGTCAGTAGACTTCTTGAATCCTTCAGCAGCGTTTGGTTCCTCAGTTTCTGGATCGGAAGAAGCTTCTAACATTGCCCAACTTACAGAAAACATCTTTAGAAGAAAAATTTGAAGTTCCGCTGTCACCTTGCCCCTGTTAGGCAGGAGTTCATTTTCTGCTCCCCCACTAATGATTACCTGTTATATACACTGATCTTTTTCTTTCTCAGGTTATCTAGTTTTAGTTCTGCACTCAAATTGAATAATATTTAGCAGCGTCTATTCTTCTGTTCGTTTTTAAAGAAAAAGTTGGTTGACTTTCTCATCATGAATCTCTTCTGTAAAATGGATGAAGGCATCGACGTAGCCGGAGTCCCAGCAGAGAAAGGAGTTCTCGTAGATATCGCTCACGTTCAAGGTCTGGCTCACGGTCGCGCACTCACTCTTGCTCACATTCGCCTTCGCATTCTCACTCCAGTTCACGCTCTCTTTCTCGTTCCATTTCCCGGTCTCGTTCACCTCGGTGAGTCCCGATTGTATATTTTGCCTTTTGGTTTTTGATGTGCTAGATGACTTACATGAGCTGATATTGCAGTAGGAGACGATCAAGATACTGATACTACAGGCATGAACGAGTGTTAGCTGTGGGCGATATATATTACTGATGTATTGTTGTACTGGTAAACTTATAGCTGAAGCTGAATTTGGGTTGATGATGTGAAGTTTTATTCATGAGTTGTGTTTATTGTTTTTGGTTGCTTTTTGAACTTGCTGAAGAATATTTAGCGTGACAATTATATTATTTCAGCTCCTTTAGTAGGATGATGCATCATTCCAGTA</genome_strand>
        <mrna_strand>GCGATAGAGAAGCTGCCCGTATTACCGGTAGTAGAGTTCTTCATCATGATCCCTATCG....................................................................................................TGAATCTCGTCGAAGTCCGACATATGAAGCTTATTCACGTTCCAGAAG......................................................................................ATCCAGGTCAAGGTCTCTCTCATACTCCCCTCCCCATTCAAGGCGCTACGAACGTGGAGGCAAATCTGATGATATTTACCAAGGCAAAGAAAGAACTCCGAAGATAGAGTATATTACTGAATTTGGTGGCGCAGATGATGAGAACAAGCCTAAAGTTGAAGGATATTCTCCACCACCATCTCCTCCACCTCGAACTGATCCATTAAGCCG......................................................................................................................................................................................................................................GCCATCAACTGGTCGTATTCTTGAGGCCCTCCATGTAGATCCTGCATCTGGGGTATCTATTGATAAGGATAAGAGTGGCCAAATGTTGAAAACACCAACAAG................................................................................................................................................TGCGTCTTCAGCACTATCTAAGTTGAACAAGACAACTAGTAGTTCAAGTCTCTCTAAACAGCAGGGTGAAAAGAAGGAAACACCTCAGGAGAGACTTAAGCGGATTATGAGCAAACAATTGAACAAACAAA.......................................................................................................................................................TCAAGAAAGATACAGCTATTGAAACTGCCAAGAAAAGAGAACAAGAGAAACAGAGGCTTGAAAAGCTGGCAGAGACAAGCCGGGTAAGCCGGTATCGTCGCCGAAGCCGTAGTAGAAGTTACAGCCGTTCCCCTCGAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATCGACGTAGCCGGAGTCCCAGCAGAGAAAGGAGTTCTCGTAGATATCGCTCACGTTCAAGGTCTGGCTCACGGTCGCGCACTCACTCTTGCTCACATTCGCCTTCGCATTCTCACTCCAGTTCACGCTCTCTTTCTCGTTCCATTTCCCGGTCTCGTTCACCTCG........................................................................TAGGAGACGATCAAGATACTGATACTACAGGCATGAACGAGTGTTAGCTGTGGGCGATATATATTACTGATGTATTGTTGTACTGGTAAACTTATAGCTGAAGCTGAATTTGGGTTGATGATGTGAAGTTTTATTCATGAGTTGTGTTTATTGTTTTTGGTTGCTTTTTGAACTTGCTGAAGAATATTTAGCGTGACAATTATATTATTTCAGCTCCTTTAGTAGGATGATGCATCATTCCAGTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0012A12-ClXVT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U580003" ref_strand="+" ref_description="SGN-U580003 Tomato 200607#2 [19 ESTs aligned] (*GB) gi|145334249|ref|NP_001078505.1| (e_value=4e-78) unknown; (*ATH) AT4G36980.1 (e_value=3e-80) | Symbol: None | expressed protein | chr4:17433639-17437057 REVERSE | Aliases: AP22.35, AP22_35; (*SWP) sp|Q8N2M8|SFR16_HUMAN (e_value=4e-11) Splicing factor, arginine/serine-rich 16 OS=Homo sapiens GN=SFRS16; ">
      <seq>cacaagtatcctaaaattgagagtgagggagggtgttagggtttccaattccgattcttcacctgcaaattaggaccgaagaagaaagagaaagatgtggcatgaagctcggaggtcggagaagaaagttcacgatatgatggacgctgctcgtaagagagctcaaagacgggccatctatctcgctaaacgccgtggtgatccacagcaatccattcaagccatcggctctcgttgtcgtatctaccgcgacgacgctctttatcaagccaccgaggatcagcagggaatgataccttggaatgggaaacaagacattttgattgacagatttgatggccgtgctcttcttgatttcattcgtgatcctagttctcgacatcgtcgggccccagaaagaacagaggaagaggaagaactagaagagtttgttaattttcagcgttatcgggatttaattaagcatcggcgtagaggatttaaagatgaagagggtatgcaacatgttaatcaggagatggaggctaaaaccactgcactgctcggctctgacagacctcagctttctcagcctccagtgagcaaggggtcgtattcacaagtgggtttctcatatgatggagaggggaaagatgaagctcacttttcggatggtgaagaagaagatgaagatgacgatgatgatgaggaagaagaagattttaacagcgatgatagcaacgatgaagtgatggagtcaattgccaaggattatggtgtgaaacggtatggatggcttgtctacacggacaaaaaggccaaggaggaagaaaggaggcaaagagaagttattaaggggagatcctgcaataaggaagctaagtcgcaaagagagaagaaaagcttctcaactagaaagggagagggaaagagaagctgcccgtattaccggtagtagagttcttcatcatgatccctatcgtgaatctcgtcgaagtccgacatatgaagcttattcacgttccagaagatccaggtcaaggtctctctcatactcccctccccattcaaggcgctacgaacgtggaggcaaatctgatgatatttaccaaggcaaagaaagaactccgaagatagagtatattactgaatttggtggcgcagatgatgagaacaagcctaaagttgaaggatattctccaccaccatctcctccacctcgaactgatccattaagccggtcggagcacttgaccttttattcttgcaaagctagattggacagtcttttctctgctgcagcttttcatccatttgttagctgaggaacttaatgtggtttagaatatatcaccatttacacctgttcgaataactgtcaaggggaagagggagcaagtctccattttcactgttcagtttgcatgataacatgaaacatttcttgtttaaaatctcacttttctgcaggccatcaactggtcgtattcttgaggccctccatgtagatcctgcatctggggtatctattgataaggataagagtggccaaatgttgaaaacaccaacaagtgcgtcttcagcactaaccaagttgaacaagacaactaatagattcaagtctctctaaaacagcaaggtggaaaagaaggaaacacctcaggagagacttaagcggattatgag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0012A12-ClXVT/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0012A12.1" temp_strand="-" temp_description="C02HBa0012A12.1  AC215355.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0012A12 sequenced_by:kribb upload_account_name:korea">
        <position start="75793" stop="70234"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="75493" g_stop="75203" g_length="291"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="291" r_length="291" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="75202" i_stop="74422" i_length="781">
            <donor d_prob="0.936" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="74421" g_stop="74383" g_length="39"/>
          <reference_exon_boundary r_type="cDNA" r_start="292" r_stop="330" r_length="39" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="74382" i_stop="74293" i_length="90">
            <donor d_prob="0.000" d_score="0.00"/>
            <acceptor a_prob="0.960" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="74292" g_stop="74144" g_length="149"/>
          <reference_exon_boundary r_type="cDNA" r_start="331" r_stop="479" r_length="149" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="74143" i_stop="73999" i_length="145">
            <donor d_prob="0.758" d_score="1.00"/>
            <acceptor a_prob="0.740" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="73998" g_stop="73923" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="480" r_stop="555" r_length="76" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="73922" i_stop="72042" i_length="1881">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="72041" g_stop="71747" g_length="295"/>
          <reference_exon_boundary r_type="cDNA" r_start="556" r_stop="851" r_length="296" r_score="0.993"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="71746" i_stop="71675" i_length="72">
            <donor d_prob="0.828" d_score="0.96"/>
            <acceptor a_prob="0.748" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="71674" g_stop="71565" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="852" r_stop="961" r_length="110" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="71564" i_stop="71465" i_length="100">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.770" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="71464" g_stop="71417" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="962" r_stop="1009" r_length="48" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="71416" i_stop="71331" i_length="86">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.274" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="71330" g_stop="70789" g_length="542"/>
          <reference_exon_boundary r_type="cDNA" r_start="1010" r_stop="1551" r_length="542" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="70788" i_stop="70645" i_length="144">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="70644" g_stop="70534" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="1552" r_stop="1665" r_length="114" r_score="0.910"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0012A12.1" gen_strand="-" ref_id="SGN-U580003" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>1661</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0012A12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U580003" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="75493" e_stop="75203"/>
          <exon e_start="74421" e_stop="74383"/>
          <exon e_start="74292" e_stop="74144"/>
          <exon e_start="73998" e_stop="73923"/>
          <exon e_start="72041" e_stop="71747"/>
          <exon e_start="71674" e_stop="71565"/>
          <exon e_start="71464" e_stop="71417"/>
          <exon e_start="71330" e_stop="70789"/>
          <exon e_start="70644" e_stop="70534"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACAAGTATCCTAAAATTGAGAGTGAGGGAGGGTGTTAGGGTTTCCAATTCCGATTCTTCACCTGCAAATTAGGACCGAAGAAGAAAGAGAAAGATGTGGCATGAAGCTCGGAGGTCGGAGAAGAAAGTTCACGATATGATGGACGCTGCTCGTAAGAGAGCTCAAAGACGGGCCATCTATCTCGCTAAACGCCGTGGTGATCCACAGCAATCCATTCAAGCCATCGGCTCTCGTTGTCGTATCTACCGCGACGACGCTCTTTATCAAGCCACCGAGGATCAGCAGGGAATGTATGATCTTATTTTCATGTTTTTGTTTTTCCGTTCAAGTAATTCTAGGGCTTCACCTCTGTTGACACTGAATTTTATTATTAGTGGAATAGTGTTTGAGATGCTTCAATATGGAAAGTTTCATACATTTGGAATGCAAGAACCAACAAGTACAATACAATGAAACATGGTAGATATTGATTATTCAATTATTGTATAGAAAACAGACGACATTAACTACACAAGGATGCGTGTTTGCAGTGAACTAACTTTTTACTTCTTTATACTTGTTTGGTGTTTACAATTTAGGTTCTTAACTTCATGTTTTTCTAAGATAATTCGTTTGGTAAATTTCTGATTACATTTTCTTGTTCTGGTCCGCATCTCACTGGCGCATGTAAGGATTTTGTTGGAATCACCATCTTAATGTCATTGCTTTCAAGAGTTGAAATGTACAGGCCTACGGTAAAAACAATAGTCTAATAATAAGGATATTAGTACGCAAGTCATAATACCACCATCTTGTTTTCAAGCTCAAATTGTTTGATATTATACTTCTATATGCCTCTTCTTTCTCCCGATGAAATCAATCATCCTAAAAGTATTATTATTGTGCTGAGGAATTTTAGTATCATGATTTCCTAAGGTTTGGTGTTTACTGATCCAAAGTTATCAGAACATTTGAAACTAGTTAAGATTTATGTGGTGATGCTTATCATTCTCTTTCTGACTTAGATAAAATTTACATGCTGACAATGGTTTCATATTTTTTTAAGTGCTTATTTCTTTATATATGTATCAGGATACCTTGGAATGGGAAACAAGACATTTTGATTGACAGGTCACTCCACAACTCTTACAGTGATAGAACACTTTGTCATAGGAGATTTCGCTTTTTCATATAATTGACATTTTGACTATTATCCGACAGATTTGATGGCCGTGCTCTTCTTGATTTCATTCGTGATCCTAGTTCTCGACATCGTCGGGCCCCAGAAAGAACAGAGGAAGAGGAAGAACTAGAAGAGTTTGTTAATTTTCAGCGTTATCGGGATTTAATTAAGCATCGGCGTAGAGGATGTCGGTACTTTTTTGTTTTTTTTGACTATCCTTACATTTTGCTATTCATTATAGGATATTTCTTTCTTATTAGGCTTTTAGAAATAGTTCGGTGAATTTTTCGGGGGTACTTTCTCCTGCGCAAGTTAACACTATTTATTGACAGTTAAAGATGAAGAGGGTATGCAACATGTTAATCAGGAGATGGAGGCTAAAACCACTGCACTGCTCGGCTCTGACAGGTTTCTATTTCTGTCCTTATTTTTCACTTTAGAGCGTTTGCCTTTTAGTTGCCATTTGTTCACTCTCCCTACTCTGCAAAGAGCCGAAGATCAATAAAATAAGAGAAGGAAGAAGAAAATGTGAGAGTTTTCTATTCTCCATGGCCTTGGACCAAAGTTAAGTCTATTTAGGTTTAACCATTTGATTCAAACTTGTTGATCTCATTACTGATGTTGTGTAGCGTTCTGAATTTTGTTTGCTTTAAGTTGTGTCTACAATGTAGCAACTAGTGCTTAATATTTAATTAGTGCATAATCACTCTTTTTTTATTGTTTGAGTTGATAATCACTCATAACTCAAAGATATTAAAGAACTCTTTGAAGGAAGAGTTGCGCAGTTGGTCTTTTGAAAGAGGAAAATAATGCTTGAGGGGGTGGATCGATGGGGTGTTGCTCCATCCCCCCCCCCCTAACATGGAAAGTGAGAAATAGTAGAGGAATTAATGGAGAGTTGGCAGCACCAGAGAACACACAAAGCTTTGAAGCAAATCTGGAGAACTATACCGTTGTGCATATTCTGGACTATCTGGCTAGAAAGAAATAAAGCTTGTTTTGATGGGCATAAAGGCCATATATCTAGAGTTAAAAACAAGTATTTACATAATTTGTTTTGTTTGTGTTAAAGTAGTTTCCTTGATAATATACATCAATATATGGAGTTTTTGGAACTGCCAGGGAGATGTTGTAATTGACTGTATGGATATTCCCAGCAGTCTTTTTGTAACTTTTGATTTTGGTACCTTCTTGGTACTTAGTCAATAAACCTTTACCTTATCAAAAAAATAAATAAATAAAATAGTAGAGTGTTTGAAGGGGTTGACAATGATTTTTTGTAATTGAAGATTAGCCTCTGGTGTCTTGTTTTGGTGTACCCATGAGATACCTATATGTATAGAAGTTTGAGTTTCTTTTGTAGGGAGAACTATATCTTGATATAGGTTCTCTACTTTTTGTAGTATATGGGCTTTCCCCATCTTTAGGTGGGTGGATCACTAAATGATTTAATTTATTTTTTAAAATTTTTGGTTTGTTATATAAATAATTAATATCAGTAAATTTTAATTAAAAAATAATTTAATAGATTGAGTGATTTTTGAGGAAAGAGTGGATAGTTGAGTGACTTTCTGAGGAAAGAGTAGATAGTTGAGTGACTTTTGAGTTAAAATTCAAAGTTGAGTGACTTTCTGAGAAAGAAGTGCATAGTTGAGTGACTTTTGAGTGAAAATTGAAAGTTGAGTGACTTCTGAGAGAAGAGTGCATAGTTGAGTGACCATATGAGGTATTAACTCACTTTTTGTAGTATATGGGCTTTCCCCATCTTTAATAAAATTATTTAGCTTATTAATAAATTGAAGAACTGACTTCTGCCTTGTTTGTTATTAATATTCCTAGTAAAGAAAATCACTCTGTATAAAAAGTATATAGAACATTCTTGTATTCTAACAACCTAGATGTCTAATATTCATCATTTTCATGTGTGACATTTCCTTTATTATAATGTATGGTTTTTACTATCTTTCACAACTATTATTATTTTATTTTTCACTTTCTATCAACTTTTATAATGTGAAGGCAAAAATATACTTCTGTGGATGGGTATTGTCATTTTTGATGCTTAAATAAATGTTCACTATAGAGATGATAAGTTAGTACAGAGTTGTACTGGTAATATTTTGTGTCTTGAATTGTTTCAGTTCCGAGTGTTTTGCGATTAATTAAAACTTGTTATATGTTTGTGTGTTTTCTTGGTGGACTTTGATATAACACTTCTCAACCGGGTTTTTACATTATATAGTCTAATTTGCTAGGCACTTGTTGCTTTCTGAAATTTCGGTATTGCAGACCTCAGCTTTCTCAGCCTCCAGTGAGCAAGGGGTCGTATTCACAAGTGGGTTTCTCATATGATGGAGAGGGGAAAGATGAAGCTCACTTTTCGGATGGTGAAGAAGAAGATGAAGATGACGATGATGATGAGGAAGAAGAAGATTTTAACAGCGATGATAGCAACGATGAAGTGATGGAGTCAATTGCCAAGGATTATGGTGTGAAACGGTATGGATGGCTTGTCTACACGGACAAAAAGGCCAAGGAGGAAGAAAGGAGGCAAAGAGAAGTTATTAA-GGGAGATCCTGCAATAGTAAGTTTGCTAGATGCACACTTGATTGTTGCAAAATTTTAGTGTGGTATCAGACTAATCATGCCTCTGCAGAGGAAGCTAAGTCGCAAAGAGAGAAGAAAAGCTTCTCAACTAGAAAGGGAGAGGGAAAGAGAAGCTGCCCGTATTACCGGTAGTAGAGTTCTTCATCATGATCCCTATCGGTACTTTAGTTCTTTTGCTTCTATCACACTTACTCGTGTATACTTAAAGTCAGGTTACTTGACTTGTTCGCTCACTCTGTTTTCTCTACCTCTTATGCAGTGAATCTCGTCGAAGTCCGACATATGAAGCTTATTCACGTTCCAGAAGGTTTCTTATCTTTTATATTTTATTTATGCACTTTTAAATGGCCAGTGGTCTTCCTAATGTTGCTTTAATCATTTTTCCATCTGCAGATCCAGGTCAAGGTCTCTCTCATACTCCCCTCCCCATTCAAGGCGCTACGAACGTGGAGGCAAATCTGATGATATTTACCAAGGCAAAGAAAGAACTCCGAAGATAGAGTATATTACTGAATTTGGTGGCGCAGATGATGAGAACAAGCCTAAAGTTGAAGGATATTCTCCACCACCATCTCCTCCACCTCGAACTGATCCATTAAGCCGGTCGGAGCACTTGACCTTTTATTCTTGCAAAGCTAGATTGGACAGTCTTTTCTCTGCTGCAGCTTTTCATCCATTTGTTAGCTGAGGAACTTAATGTGGTTTAGAATATATCACCATTTACACCTGTTCGAATAACTGTCAAGGGGAAGAGGGAGCAAGTCTCCATTTTCACTGTTCAGTTTGCATGATAACATGAAACATTTCTTGTTTAAAATCTCACTTTTCTGCAGGCCATCAACTGGTCGTATTCTTGAGGCCCTCCATGTAGATCCTGCATCTGGGGTATCTATTGATAAGGATAAGAGTGGCCAAATGTTGAAAACACCAACAAGGTGCATATTCTAACACCCTTCCACTTTCTGGTTATTTGACTGTTTGTTCTTTCCCTTCCCCACATATTTGTTTGTGCTTGTGTATGTGTCTCCTTAAAAAACAAACCAGTTACTAATTTGTACTCCCTTTTTTGGTCTTGGCAGTGCGTCTTCAGCACTATCTAAGTTGAACAAGACAACTAGTAG-TTCAAGTCTCTCT-AAACAGCAGGGT-GAAAAGAAGGAAACACCTCAGGAGAGACTTAAGCGGATTATGAG</genome_strand>
        <mrna_strand>CACAAGTATCCTAAAATTGAGAGTGAGGGAGGGTGTTAGGGTTTCCAATTCCGATTCTTCACCTGCAAATTAGGACCGAAGAAGAAAGAGAAAGATGTGGCATGAAGCTCGGAGGTCGGAGAAGAAAGTTCACGATATGATGGACGCTGCTCGTAAGAGAGCTCAAAGACGGGCCATCTATCTCGCTAAACGCCGTGGTGATCCACAGCAATCCATTCAAGCCATCGGCTCTCGTTGTCGTATCTACCGCGACGACGCTCTTTATCAAGCCACCGAGGATCAGCAGGGAAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATACCTTGGAATGGGAAACAAGACATTTTGATTGACAG..........................................................................................ATTTGATGGCCGTGCTCTTCTTGATTTCATTCGTGATCCTAGTTCTCGACATCGTCGGGCCCCAGAAAGAACAGAGGAAGAGGAAGAACTAGAAGAGTTTGTTAATTTTCAGCGTTATCGGGATTTAATTAAGCATCGGCGTAGAGGAT.................................................................................................................................................TTAAAGATGAAGAGGGTATGCAACATGTTAATCAGGAGATGGAGGCTAAAACCACTGCACTGCTCGGCTCTGACAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCTCAGCTTTCTCAGCCTCCAGTGAGCAAGGGGTCGTATTCACAAGTGGGTTTCTCATATGATGGAGAGGGGAAAGATGAAGCTCACTTTTCGGATGGTGAAGAAGAAGATGAAGATGACGATGATGATGAGGAAGAAGAAGATTTTAACAGCGATGATAGCAACGATGAAGTGATGGAGTCAATTGCCAAGGATTATGGTGTGAAACGGTATGGATGGCTTGTCTACACGGACAAAAAGGCCAAGGAGGAAGAAAGGAGGCAAAGAGAAGTTATTAAGGGGAGATCCTGCAATA........................................................................AGGAAGCTAAGTCGCAAAGAGAGAAGAAAAGCTTCTCAACTAGAAAGGGAGAGGGAAAGAGAAGCTGCCCGTATTACCGGTAGTAGAGTTCTTCATCATGATCCCTATCG....................................................................................................TGAATCTCGTCGAAGTCCGACATATGAAGCTTATTCACGTTCCAGAAG......................................................................................ATCCAGGTCAAGGTCTCTCTCATACTCCCCTCCCCATTCAAGGCGCTACGAACGTGGAGGCAAATCTGATGATATTTACCAAGGCAAAGAAAGAACTCCGAAGATAGAGTATATTACTGAATTTGGTGGCGCAGATGATGAGAACAAGCCTAAAGTTGAAGGATATTCTCCACCACCATCTCCTCCACCTCGAACTGATCCATTAAGCCGGTCGGAGCACTTGACCTTTTATTCTTGCAAAGCTAGATTGGACAGTCTTTTCTCTGCTGCAGCTTTTCATCCATTTGTTAGCTGAGGAACTTAATGTGGTTTAGAATATATCACCATTTACACCTGTTCGAATAACTGTCAAGGGGAAGAGGGAGCAAGTCTCCATTTTCACTGTTCAGTTTGCATGATAACATGAAACATTTCTTGTTTAAAATCTCACTTTTCTGCAGGCCATCAACTGGTCGTATTCTTGAGGCCCTCCATGTAGATCCTGCATCTGGGGTATCTATTGATAAGGATAAGAGTGGCCAAATGTTGAAAACACCAACAAG................................................................................................................................................TGCGTCTTCAGCACTAACCAAGTTGAACAAGACAACTAATAGATTCAAGTCTCTCTAAAACAGCAAGGTGGAAAAGAAGGAAACACCTCAGGAGAGACTTAAGCGGATTATGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0012A12-ClXVT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U600950" ref_strand="+" ref_description="SGN-U600950 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>gataaggtaaaggtttattgactaagtaccaagaaggtaccaaaatccctttttacaaaaagactgctgggaatatccatacagtcaattacaacatctccctggcagttccaaaaactccatataattgatgtatattatcaaggaaactactttaacactaacaaaaaaaaattatgta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0012A12-ClXVT/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0012A12.1" temp_strand="+" temp_description="C02HBa0012A12.1  AC215355.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0012A12 sequenced_by:kribb upload_account_name:korea">
        <position start="72808" stop="73586"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="73108" g_stop="73286" g_length="179"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="181" r_length="181" r_score="0.939"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0012A12.1" gen_strand="+" ref_id="SGN-U600950" ref_strand="+">
        <total_alignment_score>0.939</total_alignment_score>
        <cumulative_length_of_scored_exons>179</cumulative_length_of_scored_exons>
        <coverage percentage="0.989" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0012A12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U600950" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="73108" e_stop="73286"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATAAGGTAAAGGTTTATTGACTAAGTACCAAGAAGGTACCAAAATCAAAAGTTACAAAAAGACTGCTGGGAATATCCATACAGTCAATTACAACATCTCCCTGGCAGTTCCAAAAACTCCATAT-ATTGATGTATATTATCAAGGAAACTACTTTAACACAAAC-AAAACAAATTATGTA</genome_strand>
        <mrna_strand>GATAAGGTAAAGGTTTATTGACTAAGTACCAAGAAGGTACCAAAATCCCTTTTTACAAAAAGACTGCTGGGAATATCCATACAGTCAATTACAACATCTCCCTGGCAGTTCCAAAAACTCCATATAATTGATGTATATTATCAAGGAAACTACTTTAACACTAACAAAAAAAAATTATGTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0012A12-ClXVT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U578816" ref_strand="+" ref_description="SGN-U578816 Tomato 200607#2 [2 ESTs aligned] (*GB) gi|157345121|emb|CAO71849.1| (e_value=8e-14) unnamed; (*ATH) AT4G36980.2 (e_value=2e-13) |; ">
      <seq>gaagagtttgttaattttcagcgttatcgggatttaattaagcatcggcgtagaggatttaaagatgaagagggtatgcaacatgttaatcaggagatggaggctaaaaccactgcactgctcggctctgacaggtttctatttctgtccttatttttcactttagagcgtttgccttttagttgccatttgttcactctccctactctgcaaagagccgaagatcaataaaataagagaaggaagaagaaaatgtgagagttttctattctccatggccttggaccaaagttaagtctatttaggtttaaccatttgattcaaacttgttgatctcattactgatgttgtgtagcgttctgaattttgtttgctttaagttgtgtctacaatgtagcaactagtgcttaatatttaattagtgcataatcactctttttttattgtttgagttgataatcactcataactcaaagatattaaagaactctttgaaggaagagttgcgcagttggtcttttgaaagaggaaaataatgcttgagggggt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0012A12-ClXVT/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0012A12.1" temp_strand="-" temp_description="C02HBa0012A12.1  AC215355.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0012A12 sequenced_by:kribb upload_account_name:korea">
        <position start="74501" stop="73208"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="74201" g_stop="74144" g_length="58"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="58" r_length="58" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="74143" i_stop="73999" i_length="145">
            <donor d_prob="0.758" d_score="1.00"/>
            <acceptor a_prob="0.740" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="73998" g_stop="73508" g_length="491"/>
          <reference_exon_boundary r_type="cDNA" r_start="59" r_stop="549" r_length="491" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0012A12.1" gen_strand="-" ref_id="SGN-U578816" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>549</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0012A12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U578816" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="74201" e_stop="74144"/>
          <exon e_start="73998" e_stop="73508"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGAGTTTGTTAATTTTCAGCGTTATCGGGATTTAATTAAGCATCGGCGTAGAGGATGTCGGTACTTTTTTGTTTTTTTTGACTATCCTTACATTTTGCTATTCATTATAGGATATTTCTTTCTTATTAGGCTTTTAGAAATAGTTCGGTGAATTTTTCGGGGGTACTTTCTCCTGCGCAAGTTAACACTATTTATTGACAGTTAAAGATGAAGAGGGTATGCAACATGTTAATCAGGAGATGGAGGCTAAAACCACTGCACTGCTCGGCTCTGACAGGTTTCTATTTCTGTCCTTATTTTTCACTTTAGAGCGTTTGCCTTTTAGTTGCCATTTGTTCACTCTCCCTACTCTGCAAAGAGCCGAAGATCAATAAAATAAGAGAAGGAAGAAGAAAATGTGAGAGTTTTCTATTCTCCATGGCCTTGGACCAAAGTTAAGTCTATTTAGGTTTAACCATTTGATTCAAACTTGTTGATCTCATTACTGATGTTGTGTAGCGTTCTGAATTTTGTTTGCTTTAAGTTGTGTCTACAATGTAGCAACTAGTGCTTAATATTTAATTAGTGCATAATCACTCTTTTTTTATTGTTTGAGTTGATAATCACTCATAACTCAAAGATATTAAAGAACTCTTTGAAGGAAGAGTTGCGCAGTTGGTCTTTTGAAAGAGGAAAATAATGCTTGAGGGGGT</genome_strand>
        <mrna_strand>GAAGAGTTTGTTAATTTTCAGCGTTATCGGGATTTAATTAAGCATCGGCGTAGAGGAT.................................................................................................................................................TTAAAGATGAAGAGGGTATGCAACATGTTAATCAGGAGATGGAGGCTAAAACCACTGCACTGCTCGGCTCTGACAGGTTTCTATTTCTGTCCTTATTTTTCACTTTAGAGCGTTTGCCTTTTAGTTGCCATTTGTTCACTCTCCCTACTCTGCAAAGAGCCGAAGATCAATAAAATAAGAGAAGGAAGAAGAAAATGTGAGAGTTTTCTATTCTCCATGGCCTTGGACCAAAGTTAAGTCTATTTAGGTTTAACCATTTGATTCAAACTTGTTGATCTCATTACTGATGTTGTGTAGCGTTCTGAATTTTGTTTGCTTTAAGTTGTGTCTACAATGTAGCAACTAGTGCTTAATATTTAATTAGTGCATAATCACTCTTTTTTTATTGTTTGAGTTGATAATCACTCATAACTCAAAGATATTAAAGAACTCTTTGAAGGAAGAGTTGCGCAGTTGGTCTTTTGAAAGAGGAAAATAATGCTTGAGGGGGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0012A12-ClXVT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U563827" ref_strand="+" ref_description="SGN-U563827 Tomato 200607#2 [83 ESTs aligned] (*GB) gi|157345119|emb|CAO71847.1| (e_value=2e-43) unnamed; (*ATH) AT4G33985.1 (e_value=5e-31) | Symbol: None | expressed protein | chr4:16288117-16288918 REVERSE | Aliases: None; ">
      <seq>agctcgatgaaaattgttcgttaggaaaatctcttaaaaattcacatattgtgtatttggcttcgaagggtggttacatccttcgccgtcaacactactataacctagacgcccgagccatcggagctcccctccaccctctcataggggttgggttggtcgggctctttccatgtcacaccccaccgcagctccgctatcaggaccacgcctctcacaaccctcgtcgtcggcgatgtctcccttgtacaaacagaaatcttggtcaccggacacgtttcgcgacgaggcgtggcagcggcggaagggtacccacggaagctgcctcaaacggcggagcaagagcgttaccgatgaggactttgatgagattaaggcctgtatcgaattagggtttggatttgattcgccagaaatggatcagcgattgtctgatacttttccggcgtatgacctgttttacgccgtgaataaacaatacaccgacactctttcaaagacttcctctgtatcatcggtcatctccaattgcgagtcaacccttcctcccgtcagtccccacaccattgtctttccaggagataatccacaggcagtgaagacaaggttgcggcaatgggcacaggtggttgcgtgtgtggtgcgtcaatcttcgtattaatggaagctgcatatattgaatgaataagaagatgatggtaatttgttgtgtaccagtactattgtttttcagggcaaaaaagattaactcatacttaatttgaaaaagtaattatagttaagattgattgaatatcaacctattcaatcttggcgactaatagtctgttgatatgatttttattagtatgatgattgtgttgcaaccacatatacagctggtccatcttaattaattgctagtagctttgtttgttgatatttccatcatttgtaacatcatccagcaagtgggacatgacttgttcttctttaatttgaaagactcacttttctctttggaatgctttgttcttttgcctagaatgtcttgtgcactaagaaatatcaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0012A12-ClXVT/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0012A12.1" temp_strand="+" temp_description="C02HBa0012A12.1  AC215355.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0012A12 sequenced_by:kribb upload_account_name:korea">
        <position start="81115" stop="82923"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81232" g_stop="81249" g_length="18"/>
          <reference_exon_boundary r_type="cDNA" r_start="83" r_stop="98" r_length="16" r_score="0.722"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81250" i_stop="81420" i_length="171">
            <donor d_prob="0.000" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81421" g_stop="81900" g_length="480"/>
          <reference_exon_boundary r_type="cDNA" r_start="99" r_stop="578" r_length="480" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81901" i_stop="82148" i_length="248">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="82149" g_stop="82623" g_length="475"/>
          <reference_exon_boundary r_type="cDNA" r_start="579" r_stop="1052" r_length="474" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0012A12.1" gen_strand="+" ref_id="SGN-U563827" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>973</cumulative_length_of_scored_exons>
        <coverage percentage="0.925" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0012A12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U563827" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81232" e_stop="81249"/>
          <exon e_start="81421" e_stop="81900"/>
          <exon e_start="82149" e_stop="82623"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGCCAAGTCTACACGAGATTAGTGGGTAACTTTGACAAAAGCAAGGGACTAATTAAAGAAAGTAAAACATCATTATGAGTTGGACCAACGAATACCTAGCGTGCAAGGCCCACAAGCCGATGTCATGTGGGCCCATTTTCGTTCTCTCTCCTAATATAAATCCTTTTTTCAAGCCTATTTTGAATCACTATAACCTAGACGCCCGAGCCATCGGAGCTCCCCTCCACCCTCTCATAGGGGTTGGGTTGGTCGGGCTCTTTCCATGTCACACCCCACCGCAGCTCCGCTATCAGGACCACGCCTCTCACAACCCTCGTCGTCGGCGATGTCTCCCTTGTACAAACAGAAATCTTGGTCACCGGACACGTTTCGCGACGAGGCGTGGCAGCGGCGGAAGGGTACCCACGGAAGCTGCCTCAAACGGCGGAGCAAGAGCGTTACCGATGAGGACTTTGATGAGATTAAGGCCTGTATCGAATTAGGGTTTGGATTTGATTCGCCAGAAATGGATCAGCGATTGTCTGATACTTTTCCGGCGTATGACCTGTTTTACGCCGTGAATAAACAATACACCGACACTCTTTCAAAGACTTCCTCTGTATCATCGGTCATCTCCAATTGCGAGTCAACCCTTCCTCCCGTCAGTCCCCACACCATTGTCTTTCCAGGTAAATTCTAAAAACCTTCATTATTTCAAAATCATTACATCAGAATGTTCAACACAAATTCCATTCCTATTCAACTTTCGTAAATTCGTTTACATTTTGACATGAGGTTACCTTTCGATTACAGAAAATTCCTGAGTTTGTTAATTTTCCTTATTGAGTTGAATAGCAATGCATAATTTTATTCTTGATAAGGTTCAGAAAATTGAACGTATGGTTGCTAATATTTGAAAAAAAAAAAATGAATGTAGGAGATAATCCACAGGCAGTGAAGACAAGGTTGCGGCAATGGGCACAGGTGGTTGCGTGTGTGGTGCGTCAATCTTCGTATTAATGGAAGCTGCATATATTGAATGAATAAGAAGATGATGGTAATTTGTTGTGTACCAGTACTATTGTTTTTCAGGGCAAAAAAGATTAACTCATACTTAATTTGAAAAAGTAATTATAGTTAAGATTGATTGAATATCAACCTATTCAATCTTGGCGACTAATAGTCTGTTGATATGATTTTTATTAGTATGATGATTGTGTTGCAACCACATATACAGCTGGTCCATCTTAATTAATTGCTAGTAGCTTTGTTTGTTGATATTTCCATCATTTGTAACATCATCCAGCAAGTGGGACATGACTTGTTCTTCTTTAATTTGAAAGACTCACTTTTCTCTTTGGAATGCTTTGTTCTTTTGCCTAGATTGTCTTGTGCACTAAGAAAATATCAAA</genome_strand>
        <mrna_strand>TCGCC--GTCAACACTAC...........................................................................................................................................................................TATAACCTAGACGCCCGAGCCATCGGAGCTCCCCTCCACCCTCTCATAGGGGTTGGGTTGGTCGGGCTCTTTCCATGTCACACCCCACCGCAGCTCCGCTATCAGGACCACGCCTCTCACAACCCTCGTCGTCGGCGATGTCTCCCTTGTACAAACAGAAATCTTGGTCACCGGACACGTTTCGCGACGAGGCGTGGCAGCGGCGGAAGGGTACCCACGGAAGCTGCCTCAAACGGCGGAGCAAGAGCGTTACCGATGAGGACTTTGATGAGATTAAGGCCTGTATCGAATTAGGGTTTGGATTTGATTCGCCAGAAATGGATCAGCGATTGTCTGATACTTTTCCGGCGTATGACCTGTTTTACGCCGTGAATAAACAATACACCGACACTCTTTCAAAGACTTCCTCTGTATCATCGGTCATCTCCAATTGCGAGTCAACCCTTCCTCCCGTCAGTCCCCACACCATTGTCTTTCCAG........................................................................................................................................................................................................................................................GAGATAATCCACAGGCAGTGAAGACAAGGTTGCGGCAATGGGCACAGGTGGTTGCGTGTGTGGTGCGTCAATCTTCGTATTAATGGAAGCTGCATATATTGAATGAATAAGAAGATGATGGTAATTTGTTGTGTACCAGTACTATTGTTTTTCAGGGCAAAAAAGATTAACTCATACTTAATTTGAAAAAGTAATTATAGTTAAGATTGATTGAATATCAACCTATTCAATCTTGGCGACTAATAGTCTGTTGATATGATTTTTATTAGTATGATGATTGTGTTGCAACCACATATACAGCTGGTCCATCTTAATTAATTGCTAGTAGCTTTGTTTGTTGATATTTCCATCATTTGTAACATCATCCAGCAAGTGGGACATGACTTGTTCTTCTTTAATTTGAAAGACTCACTTTTCTCTTTGGAATGCTTTGTTCTTTTGCCTAGAATGTCTTGTGCACTAAG-AAATATCAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0012A12-ClXVT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U595227" ref_strand="+" ref_description="SGN-U595227 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|147839731|emb|CAN61779.1| (e_value=6e-31) hypothetical; (*ATH) AT4G33985.1 (e_value=2e-23) | Symbol: None | expressed protein | chr4:16288117-16288918 REVERSE | Aliases: None; ">
      <seq>ccgagccatcggacctctcctccaccctctcataggggttgggttggtcgggctctttccatgtcacaccccaccgcagctccgctatcaggaccacgcctctcacaaccctcgtcgtcggcgatgtctcccttgtacaaacagaaatcttggtcaccggacacgtttcgcgacgaggcgtggcagcggcggaagggtacccacggaagctgcctcaaacggcggagcaagagcgttaccgatgaggactttgatgagattaaggcctgtatcgaattagggtttggatttgattcgccagaaatggatcagcgattgtctgatacttttccggcgtatgacctgttttacgccgtgaataaacaatacaccgacactctttcaaagacttcctctgtatcatcggtcatctccaattgcgagtcaacccttcctcccgtcagtccccacaccattgtctttccaggtaaattctaaaaaccttcattatttcaaaatcattacatcagaatgttcaacacaaattccattcctattcaactttcgtaaattcgtttacattttgacatgaggttacctttcgattacagaaaattcctgagtttgttaattttccttattgagttgaatagcaatgcataattttattcttgataaggttcagaaaattgaacgtatggttgctaatatttgaaaaaaaaaaaatgaatgtaggagataatccacaggcagtgaaaacaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0012A12-ClXVT/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0012A12.1" temp_strand="+" temp_description="C02HBa0012A12.1  AC215355.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0012A12 sequenced_by:kribb upload_account_name:korea">
        <position start="81135" stop="82475"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81435" g_stop="82175" g_length="741"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="741" r_length="741" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0012A12.1" gen_strand="+" ref_id="SGN-U595227" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>741</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0012A12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U595227" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81435" e_stop="82175"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCGAGCCATCGGAGCTCCCCTCCACCCTCTCATAGGGGTTGGGTTGGTCGGGCTCTTTCCATGTCACACCCCACCGCAGCTCCGCTATCAGGACCACGCCTCTCACAACCCTCGTCGTCGGCGATGTCTCCCTTGTACAAACAGAAATCTTGGTCACCGGACACGTTTCGCGACGAGGCGTGGCAGCGGCGGAAGGGTACCCACGGAAGCTGCCTCAAACGGCGGAGCAAGAGCGTTACCGATGAGGACTTTGATGAGATTAAGGCCTGTATCGAATTAGGGTTTGGATTTGATTCGCCAGAAATGGATCAGCGATTGTCTGATACTTTTCCGGCGTATGACCTGTTTTACGCCGTGAATAAACAATACACCGACACTCTTTCAAAGACTTCCTCTGTATCATCGGTCATCTCCAATTGCGAGTCAACCCTTCCTCCCGTCAGTCCCCACACCATTGTCTTTCCAGGTAAATTCTAAAAACCTTCATTATTTCAAAATCATTACATCAGAATGTTCAACACAAATTCCATTCCTATTCAACTTTCGTAAATTCGTTTACATTTTGACATGAGGTTACCTTTCGATTACAGAAAATTCCTGAGTTTGTTAATTTTCCTTATTGAGTTGAATAGCAATGCATAATTTTATTCTTGATAAGGTTCAGAAAATTGAACGTATGGTTGCTAATATTTGAAAAAAAAAAAATGAATGTAGGAGATAATCCACAGGCAGTGAAGACAA</genome_strand>
        <mrna_strand>CCGAGCCATCGGACCTCTCCTCCACCCTCTCATAGGGGTTGGGTTGGTCGGGCTCTTTCCATGTCACACCCCACCGCAGCTCCGCTATCAGGACCACGCCTCTCACAACCCTCGTCGTCGGCGATGTCTCCCTTGTACAAACAGAAATCTTGGTCACCGGACACGTTTCGCGACGAGGCGTGGCAGCGGCGGAAGGGTACCCACGGAAGCTGCCTCAAACGGCGGAGCAAGAGCGTTACCGATGAGGACTTTGATGAGATTAAGGCCTGTATCGAATTAGGGTTTGGATTTGATTCGCCAGAAATGGATCAGCGATTGTCTGATACTTTTCCGGCGTATGACCTGTTTTACGCCGTGAATAAACAATACACCGACACTCTTTCAAAGACTTCCTCTGTATCATCGGTCATCTCCAATTGCGAGTCAACCCTTCCTCCCGTCAGTCCCCACACCATTGTCTTTCCAGGTAAATTCTAAAAACCTTCATTATTTCAAAATCATTACATCAGAATGTTCAACACAAATTCCATTCCTATTCAACTTTCGTAAATTCGTTTACATTTTGACATGAGGTTACCTTTCGATTACAGAAAATTCCTGAGTTTGTTAATTTTCCTTATTGAGTTGAATAGCAATGCATAATTTTATTCTTGATAAGGTTCAGAAAATTGAACGTATGGTTGCTAATATTTGAAAAAAAAAAAATGAATGTAGGAGATAATCCACAGGCAGTGAAAACAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0012A12-ClXVT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U566892" ref_strand="+" ref_description="SGN-U566892 Tomato 200607#2 [24 ESTs aligned] (*GB) gi|123684|sp|P22335|HSF24_SOLPE (e_value=3e-142) RecName:; (*ATH) AT4G36990.1 (e_value=5e-66) | Symbol: None | heat shock factor protein 4 (HSF4) / heat shock transcription factor 4 (HSTF4), identical to heat shock transcription factor 4 (HSF4) SP:Q96320 from (Arabidopsis thaliana) | chr4:17440287-17442145 FORWARD | Aliases: AP22.9, AP22_9; (*SWP) sp|P22335|HSF24_SOLPE (e_value=2e-143) Heat shock factor protein HSF24 OS=Solanum peruvianum GN=HSF24; ">
      <seq>gttactcttcgaaaagtcttctaaatatttctagaacctcttactagattaaatttgcttttctcattcttttaatctctcatccattttcaaaaccttgaaggataagagagagaaaacaaatcaagtttttttagagcaagaaaagatagttatggtcgtgttgttgttggtgaagattggcaaagttgtagccaatggaagattctaagattatcatcaatcgtcctaaaaataatcttgttcattctctagtctttcttttcggtttctattgttgggattgggaatttcttactgcccttttgcttttcagttattgctccttctaattaatttcttttaaatttgtaaaattcttataggatcttgtcaattaataagtaaaatccccaaaaggggaaatttgggtagatttagagaaagaggggatgtcgcaaagaacagcgccggcgccgtttctgttgaagacgtatcagttggtggatgatgcgaccactgacgatgtcatatcttggaatgaaatcggcacaacctttgtggtgtggaaaactgctgaatttgcaaaggatttgcttcccaaatacttcaagcacaataatttctccagcttcgttcgacagcttaacacctatggttttcgaaagattgtgcctgacaaatgggaattcgccaatgagaatttcaaaagaggacagaaagagctcctcacagctatacgccgtcggaagaccgtgacatcaatcccagctggtggaaagtctgtggcagccgggacttcagcatctccggacaattctggggatgacataggttcaagttctacctcgtccccagactccaagaacccgggatctgtggacactccgggaaagttgtcccagttcacggacttgtcggatgagaatgagaagctaaagaaagacaaccagatgctgagctcagagctggtgcaggcgaagaaacaatgcaatgagttggttgctttcttgagccagtacgtgaaggttgcacccgatatgatcaaccgtatcatgagccaaggaaccccatcggggtccagccttgaagagttggtcaaggaggttggtggtgttaaagatttagaagaacagggtagttataatgacaacgatgataaagaagacgatgacgaaaagggtgatactctgaaactatttggtgtgttgctgaaagaaaagaagaagaaaaggggcccggatgataatattgagacttgtggtggacgtggtaaaatgatgaaaactgtggactataatggtccttggatgaaaatgtcttcgacggccggagaaagcagcaaggtttgtaactgaggtgaagttggtgaattatgtgttgaggttggagcagagtaaattagcttctcccttttgatttagtaatttcctttggatttacaagttcgatgtttatgaataaaataaatagagaatttaattagtatgagtagtaaaaagggtttagattactactaagagtagtacacccaaaaccaactagaaattatatatatatagtacatgcagactgctatcaagtcaaatgcaactcaagtttgctttgtctagtaaggaacataataataataatattggttcttgataaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0012A12-ClXVT/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0012A12.1" temp_strand="+" temp_description="C02HBa0012A12.1  AC215355.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0012A12 sequenced_by:kribb upload_account_name:korea">
        <position start="90076" stop="93953"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90376" g_stop="91010" g_length="635"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="635" r_length="635" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="91011" i_stop="92657" i_length="1647">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="92658" g_stop="93639" g_length="982"/>
          <reference_exon_boundary r_type="cDNA" r_start="636" r_stop="1615" r_length="980" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="1626" polyA_stop="1643"/>
      <MATCH_line gen_id="C02HBa0012A12.1" gen_strand="+" ref_id="SGN-U566892" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>1617</cumulative_length_of_scored_exons>
        <coverage percentage="0.984" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0012A12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U566892" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90376" e_stop="91010"/>
          <exon e_start="92658" e_stop="93639"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTACTCTTCGAAAAGTCTTCTAAATATTTCTAGAACCTCTTACTAGATTAAATTTGCTTTTCTCATTCTTTTAATCTCTCATCCATTTTCAAAACCTTGAAGGATAAGAGAGAGAAAACAAATCAAGTTTTTTTAGAGCAAGAAAAGATAGTTATGGTCGTGTTGTTGTTGGTGAAGATTGGCAAAGTTGTAGCCAATGGAAGATTCTAAGATTATCATCAATCGTCCTAAAAATAATCTTGTTCATTCTCTAGTCTTTCTTTTCGGTTTCTATTGTTGGGATTGGGAATTTCTTACTGCCCTTTTGCTTTTCAGTTATTGCTCCTTCTAATTAATTTCTTTTAAATTTGTAAAATTCTTATAGGATCTTGTCAATTAATAAGTAAAATCCCCAAAAGGGGAAATTTGGGTAGATTTAGAGAAAGAGGGGATGTCGCAAAGAACAGCGCCGGCGCCGTTTCTGTTGAAGACGTATCAGTTGGTGGATGATGCGACCACTGACGATGTCATATCTTGGAATGAAATCGGCACAACCTTTGTGGTGTGGAAAACTGCTGAATTTGCAAAGGATTTGCTTCCCAAATACTTCAAGCACAATAATTTCTCCAGCTTCGTTCGACAGCTTAACACCTATGTACGTCTCTTTTATATCCTTTCGATTGCATCGTTTAAACAATTTCAATTGTTAGTTACTCACAAAATATGTGATGTTTTCAACTTTTAATTTTTTTTGACAGACGTTTTTTTAAATGTTACTTTACGATAATTTTGTATCAAGTCAAACTAAATCGGTAGAACTTTAATTTAAGCTAAACTAAATTACAGGGGATGGTAGGTATGACATATTTCCTATGGTATTTTTATCAAGAATAAAGTAAAAAATTATATTTCATTTTTTTTTAAGTAATATTTAAAAGATAGTTTCTGATGCTTTCGGGAAGGTTCGAGAAATCTTCTCCGCAGGACGTGAAGTCAATTATCTTATTCTGTAACACATCAGATAGGTTCTTTATTTATTTTCCCTTCCTCTCTCTGAGGAATAAAGAAATATATTATGCAACCTTTCGAGGACATAAAGAGCCATATCTATCATGTGTCTATACTATAATTATTTTTAAAAAAAAATTAGTAGTAAAAATGTACAGTAGTATTTTAACTTTATTGAATTGTTAGATGTGAACTTTTAGAAACGAAATGATCTGTATTTTGTAACTTTTTATCAACCGAACCTTACACGCGGTGGTTGGTGATAAGGAAAGAGGTAGAAACAGTGCCGTGAATTATCGTTTGGGGATTTTACATGTCATTTTCCAAATAAGGTGACAAAAGTCCAATTGGAAAACGTGGATTGTATGTGTGTTCCCCATAACAATGTTCTCCTCTAGTGACCTTGTCTTACTCGTAGCTGGAATTTTAGAATTTAAGAGATTTTTAAGTAATGATTCTTTATATAAAGTAGTAACTTTACAAATTAAATTCATTCTCAAATACTTTTTTTCTAATTTTTTTTTCTTTAATAAACTGTTAACTCTTTTCTAATTTTACTTCGGTTTTAGATTTTCTTTTCCCAAAACAAACTATTATTCTTATATTCTCCAATATCCAGAGGAAAAAAAGAAAGGTGAATCTTCCTAAAAACCCAAAACTATGAAAGAAAAATGTTGTTGGTCAATTTTAGCTGCATAAGTTCGCTTATTAAAGTTACATTCAAATTTCCCCAAGTAATTTAGTACTCTATTTTTTTAAGGCCTTTTGATAACTATCTTTTACCTAGTCCAATCCTCTAGAAGCCAAAAGAAGATACTAATAATTATGGTTTTGGAGTGTTAAAAGTAAAAAATTAGAAAAGAGAATAGAGAAGTTACTATTGGAGTTATACCAAAAAAGCTTTTGTTACGGTTTCCCTTGATAGCGAAAACAATGATTAATGGACTTTTACCCATTGTTAAATGGAGTGAAGATGCAGATTGTTAACCATGATCTTATTATGTTATTGTATATTTATACACATGGCATGCATTTATTGATTTGGTGTTAATATCTGGTATGGATAGGTTCTTGCCCTCGCTTGTTACATGCACATATCCATGATGGACTATTTCTCCAAACTTAATAGAAATTTGATACCTCTATCAAAAGATCTTTTATCACTAAGACATGTTAGGTGAAGAGCAACCTCAAGTATTACCAAGATAGTTAAGATTATCTATAACAGTAGTTGTGGCTATTTCTTTGTCACTGAAAAGTTTGCGCTCATCTTTTTTGCTTATCTTGAATGCAGGGTTTTCGAAAGATTGTGCCTGACAAATGGGAATTCGCCAATGAGAATTTCAAAAGAGGACAGAAAGAGCTCCTCACAGCTATACGCCGTCGGAAGACCGTGACATCAATCCCAGCTGGTGGAAAGTCTGTGGCAGCCGGGACTTCAGCATCTCCGGACAATTCTGGGGATGACATAGGTTCAAGTTCTACCTCGTCCCCAGACTCCAAGAACCCGGGATCTGTGGACACTCCGGGAAAGTTGTCCCAGTTCACGGACTTGTCGGATGAGAATGAGAAGCTAAAGAAAGACAACCAGATGCTGAGCTCAGAGCTGGTGCAGGCGAAGAAACAATGCAATGAGTTGGTTGCTTTCTTGAGCCAGTACGTGAAGGTTGCACCCGATATGATCAACCGTATCATGAGCCAAGGAACCCCATCGGGGTCCAGCCTTGAAGAGTTGGTCAAGGAGGTTGGTGGTGTTAAAGATTTAGAAGAACAGGGTAGTTATAATGACAACGATGATAAAGAAGACGATGACGAAAAGGGTGATACTCTGAAACTATTTGGTGTGTTGCTGAAAGAAAAGAAGAAGAAAAGGGGCCCGGATGATAATATTGAGACTTGTGGTGGACGTGGTAAAATGATGAAAACTGTGGACTATAATGGTCCTTGGATGAAAATGTCTTCGACGGCCGGAGAAAGCAGCAAGGTTTGTAACTGAGGTGAAGTTGGTGAATTATGTGTTGAGGTTGGAGCAGAGTAAATTAGCTTCTCCCTTTTGATTTAGTAATTTCCTTTGGATTTACAAGTTCGATGTTTATGAATAAAATAAATAGAGAATTTAATTAGTATGAGTAGTAAAAAGGGTTTAGATTACTACTAAGAGTAGTACACCCAAAACCAACTAGAAATTATATATATATAGTACATGCAGACTGCTATTAAGTCAAATGCAACTCAAGTTTGCTTTGTCTAGTCAGAAACTTATAATAATAATAATA</genome_strand>
        <mrna_strand>GTTACTCTTCGAAAAGTCTTCTAAATATTTCTAGAACCTCTTACTAGATTAAATTTGCTTTTCTCATTCTTTTAATCTCTCATCCATTTTCAAAACCTTGAAGGATAAGAGAGAGAAAACAAATCAAGTTTTTTTAGAGCAAGAAAAGATAGTTATGGTCGTGTTGTTGTTGGTGAAGATTGGCAAAGTTGTAGCCAATGGAAGATTCTAAGATTATCATCAATCGTCCTAAAAATAATCTTGTTCATTCTCTAGTCTTTCTTTTCGGTTTCTATTGTTGGGATTGGGAATTTCTTACTGCCCTTTTGCTTTTCAGTTATTGCTCCTTCTAATTAATTTCTTTTAAATTTGTAAAATTCTTATAGGATCTTGTCAATTAATAAGTAAAATCCCCAAAAGGGGAAATTTGGGTAGATTTAGAGAAAGAGGGGATGTCGCAAAGAACAGCGCCGGCGCCGTTTCTGTTGAAGACGTATCAGTTGGTGGATGATGCGACCACTGACGATGTCATATCTTGGAATGAAATCGGCACAACCTTTGTGGTGTGGAAAACTGCTGAATTTGCAAAGGATTTGCTTCCCAAATACTTCAAGCACAATAATTTCTCCAGCTTCGTTCGACAGCTTAACACCTAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTTTCGAAAGATTGTGCCTGACAAATGGGAATTCGCCAATGAGAATTTCAAAAGAGGACAGAAAGAGCTCCTCACAGCTATACGCCGTCGGAAGACCGTGACATCAATCCCAGCTGGTGGAAAGTCTGTGGCAGCCGGGACTTCAGCATCTCCGGACAATTCTGGGGATGACATAGGTTCAAGTTCTACCTCGTCCCCAGACTCCAAGAACCCGGGATCTGTGGACACTCCGGGAAAGTTGTCCCAGTTCACGGACTTGTCGGATGAGAATGAGAAGCTAAAGAAAGACAACCAGATGCTGAGCTCAGAGCTGGTGCAGGCGAAGAAACAATGCAATGAGTTGGTTGCTTTCTTGAGCCAGTACGTGAAGGTTGCACCCGATATGATCAACCGTATCATGAGCCAAGGAACCCCATCGGGGTCCAGCCTTGAAGAGTTGGTCAAGGAGGTTGGTGGTGTTAAAGATTTAGAAGAACAGGGTAGTTATAATGACAACGATGATAAAGAAGACGATGACGAAAAGGGTGATACTCTGAAACTATTTGGTGTGTTGCTGAAAGAAAAGAAGAAGAAAAGGGGCCCGGATGATAATATTGAGACTTGTGGTGGACGTGGTAAAATGATGAAAACTGTGGACTATAATGGTCCTTGGATGAAAATGTCTTCGACGGCCGGAGAAAGCAGCAAGGTTTGTAACTGAGGTGAAGTTGGTGAATTATGTGTTGAGGTTGGAGCAGAGTAAATTAGCTTCTCCCTTTTGATTTAGTAATTTCCTTTGGATTTACAAGTTCGATGTTTATGAATAAAATAAATAGAGAATTTAATTAGTATGAGTAGTAAAAAGGGTTTAGATTACTACTAAGAGTAGTACACCCAAAACCAACTAGAAATTATATATATATAGTACATGCAGACTGCTATCAAGTCAAATGCAACTCAAGTTTGCTTTGTCTAGTAAGGAAC--ATAATAATAATAATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0012A12-ClXVT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U595243" ref_strand="+" ref_description="SGN-U595243 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>agtatgagtagtaaaaagggtttagattactactaagagtagtacacccaaaaccaactagaaattatatatatatagtacatgcagactgctattaagtcaaatgcaactcaagtttgctttgtctagtcagaaacttataataataataataatattggttcttgatttgtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0012A12-ClXVT/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0012A12.1" temp_strand="+" temp_description="C02HBa0012A12.1  AC215355.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0012A12 sequenced_by:kribb upload_account_name:korea">
        <position start="93186" stop="93959"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="93486" g_stop="93659" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="174" r_length="174" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0012A12.1" gen_strand="+" ref_id="SGN-U595243" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>174</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0012A12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U595243" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="93486" e_stop="93659"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTATGAGTAGTAAAAAGGGTTTAGATTACTACTAAGAGTAGTACACCCAAAACCAACTAGAAATTATATATATATAGTACATGCAGACTGCTATTAAGTCAAATGCAACTCAAGTTTGCTTTGTCTAGTCAGAAACTTATAATAATAATAATAATATTGGTTCTTGATTTGTG</genome_strand>
        <mrna_strand>AGTATGAGTAGTAAAAAGGGTTTAGATTACTACTAAGAGTAGTACACCCAAAACCAACTAGAAATTATATATATATAGTACATGCAGACTGCTATTAAGTCAAATGCAACTCAAGTTTGCTTTGTCTAGTCAGAAACTTATAATAATAATAATAATATTGGTTCTTGATTTGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0012A12-ClXVT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U568666" ref_strand="+" ref_description="SGN-U568666 Tomato 200607#2 [2 ESTs aligned] (*GB) gi|729051|sp|P41210|CATR_ATRNU (e_value=3e-69) Caltractin (Centrin); (*ATH) AT3G50360.1 (e_value=8e-70) | Symbol: ATCEN2 | caltractin / centrin, identical to caltractin; centrin GI:3688162 from (Arabidopsis thaliana) | chr3:18685337-18686693 FORWARD | Aliases: F11C1.200, ATCEN2; (*SWP) sp|P41210|CATR_ATRNU (e_value=2e-70) Caltractin OS=Atriplex nummularia; ">
      <seq>gcacagatttcccaatataaattatggcaagcgtaagtagaaagatgtcaagaaaggagactagaaaccgtcatcctgggcttacacagcagaaaaggcaagagatcaaagaagcattcgagctctttgacaccgatggctctggaactattgatgccagtgagctgaatgttgctatgagggcccttggatttgaaatgacagaggagcaagttgagcaaatgattgctgatgtcgacaaggatggtagtggtgcaattgattttgatgaatttgtacacatgatgacggccaagataggggagagggacactaaagaggatctcgcgaaagcatttaacatactagatcaagataaaaatgggaaaatatctgctgctgatattcagcaaattgcaaaggagttgggtgaaaatttcagcgcaaaagaaatacaagagatgatagaggcagcagatcgtgatcgtgatggagaagtaagtgcggaagagtttatgaggatgatgaggaaaaccagcttcgcaaactagtagtacaaaaccatattatttgtcaagtttaaaaagcttctttttttttacaagttgcttgtccttctctttttcacttttcatatctatgtactctcttgtattgtgtatatgtatataatatatccacatatatattat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0012A12-ClXVT/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0012A12.1" temp_strand="+" temp_description="C02HBa0012A12.1  AC215355.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0012A12 sequenced_by:kribb upload_account_name:korea">
        <position start="95101" stop="97883"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="95400" g_stop="95425" g_length="26"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="26" r_length="26" r_score="0.962"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="95426" i_stop="96517" i_length="1092">
            <donor d_prob="0.990" d_score="0.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="96518" g_stop="96635" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="27" r_stop="144" r_length="118" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="96636" i_stop="96729" i_length="94">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="96730" g_stop="96766" g_length="37"/>
          <reference_exon_boundary r_type="cDNA" r_start="145" r_stop="181" r_length="37" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="96767" i_stop="96832" i_length="66">
            <donor d_prob="0.990" d_score="0.00"/>
            <acceptor a_prob="0.999" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="96833" g_stop="96860" g_length="28"/>
          <reference_exon_boundary r_type="cDNA" r_start="182" r_stop="209" r_length="28" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="96861" i_stop="96950" i_length="90">
            <donor d_prob="0.998" d_score="0.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="96951" g_stop="97103" g_length="153"/>
          <reference_exon_boundary r_type="cDNA" r_start="210" r_stop="362" r_length="153" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="97104" i_stop="97185" i_length="82">
            <donor d_prob="0.957" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="97186" g_stop="97288" g_length="103"/>
          <reference_exon_boundary r_type="cDNA" r_start="363" r_stop="465" r_length="103" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="97289" i_stop="97376" i_length="88">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="97377" g_stop="97583" g_length="207"/>
          <reference_exon_boundary r_type="cDNA" r_start="466" r_stop="671" r_length="206" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0012A12.1" gen_strand="+" ref_id="SGN-U568666" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>672</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0012A12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U568666" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="95400" e_stop="95425"/>
          <exon e_start="96518" e_stop="96635"/>
          <exon e_start="96730" e_stop="96766"/>
          <exon e_start="96833" e_stop="96860"/>
          <exon e_start="96951" e_stop="97103"/>
          <exon e_start="97186" e_stop="97288"/>
          <exon e_start="97377" e_stop="97583"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACACAGATTTCCCAATATAAATTATGGTAAATCTTCTTTATACTTTCTATTTCATAAAATAAAAATATCATTTTTTCCCATTGATGTCATGTTTTATATTAGATCATCTTCACGTCGCAGCAGTGCGTTTGCAAAGTTATTCATTTTGAAAAATTATATTAAATTGCAACCTAATTATAGGATAAAATTGGCTTTATTCTTCATGGATCTCCCGAATTATGCAATTTAATATTCTCTATGTTTGCTGATAAAAAACAAAGACCCCCAAAATTTATAAAAAGCAGATGTCAATTACTCATTCGGAGGGATATTTTTAATGTCGTTCGACTAAGATAATTTGTTTGAAGAAAATTTGATGATTATTGATTTGGGTACAAATATCTGTTTCTTTTTATATTTTGCTTCTTTTGATAAGTTTATGTTGACCAAAATCTACTTATCCTGGTCAATATTGTGAAGATATTTTCTTATAATATCATGAAATTGATGATTCAAAGGACAGTGACACTAGAATAAGTAATTTTGCATATTAATTTTGTTGATCTCATTAGATAGAGACTCGTTTGGCAAAGGTTTACACATAGGGCCATTTGCCATCTTTGTGTGGCTTCGCTTTTCCTATCTATCTAGCACCTTTTGGTTAGGGTCAACATAATTATCTTGGATTTTTTTTGCCTGGTGGTGAAGATGGTCAACGTTTTGACTTTTTTTAGTAGATTAGGTTATTATGAAAGGTTTATCTGCACGTTTCTTTTCTCTTCAATGGCTTGCTCTTTCAAAATGAAATTTTGGCTGGCAGTAGTACAAATTGGGAGATTTAGTTTATTTATAAGACTGTAACACATGATTTTGTGAGTTAGGCGCACGCCTCAGGTTTAATAGGAAAAAAGAAAAACTAGATGGAGAGCTTTATGCTGTGGCTGATTACCGAGCAATATTATTGTAAATTAACGGCTGAATCCGTGGAAGATGCCAATGTGTTTAAACTATGTTGTGGTTACATCTTATGATTTTCATGCTTTATCCCACACTTCAAATGAAAGTAAAATCTCATTTCCTATTTTTTCTTTTACTTGTGAACAAACTGTATTTTGCCTACTTGTGTATCTTATCATCAGGCAAGCGTAAGTAGAAAGATGTCAAGAAAGGAGACTAGAAACCGTCATCCTGGGCTTACACAGCAGAAAAGGCAAGAGATCAAAGAAGCATTCGAGCTCTTTGACACCGATGGCTCTGGTATGGAACTGTTTCCATCCTAATACATATTTTAACAGATTTTTGTGCGTGTTGTCTTTAATTTTTTTATTTTTTTGTAACTGCTACTGTTCAGGAACTATTGATGCCAGTGAGCTGAATGTTGCTATGAGGTTTGGTAATTTCTTTTCTCAAGTTAAATCAATCTAAGTTATGTGCTAATGTAACTTGTATTGCAGGGCCCTTGGATTTGAAATGACAGAGGAGGTAATTTTTCAATCCCTTTTAGTTTACGTCCTCTTTTGGTTTATGATTTATTAATACTACTACATGTCAAACGGACCATTTTGTTATCAGCAAGTTGAGCAAATGATTGCTGATGTCGACAAGGATGGTAGTGGTGCAATTGATTTTGATGAATTTGTACACATGATGACGGCCAAGATAGGGGAGAGGGACACTAAAGAGGATCTCGCGAAAGCATTTAACATACTAGATCAAGATAAAAATGTAAGTCTTTAATATCCACAGAGTAGTTTTGAATCGTTCTCCACCAATCCGTTAGTAATAATAATGTATCTTGAGAATGCAGGGGAAAATATCTGCTGCTGATATTCAGCAAATTGCAAAGGAGTTGGGTGAAAATTTCAGCGCAAAAGAAATACAAGAGATGATAGAGGCAGCAGATCGTGATCGTAAGTTTGTTTCTCACATTAAATCTTCCTTAAATTTCAGTATACTATTTTTTTAATAAGTATACTGATGTAGATCTTATTGTATTAGGTGATGGAGAAGTAAGTGCGGAAGAGTTTATGAGGATGATGAGGAAAACCAGCTTCGCAAACTAGTAGTACAAAACCATATTATTTGTCAAGTTTAAAAAGCTTCTTTTTTTTTTACAAGTTGCTTGTCCTTCTCTTTTTCACTTTTCATATCTATGTACTCTCTTGTATTGTGTATATGTATATAATATATCCACATATATATTAT</genome_strand>
        <mrna_strand>GCACAGATTTCCCAATATAAATTATG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAGCGTAAGTAGAAAGATGTCAAGAAAGGAGACTAGAAACCGTCATCCTGGGCTTACACAGCAGAAAAGGCAAGAGATCAAAGAAGCATTCGAGCTCTTTGACACCGATGGCTCTG..............................................................................................GAACTATTGATGCCAGTGAGCTGAATGTTGCTATGAG..................................................................GGCCCTTGGATTTGAAATGACAGAGGAG..........................................................................................CAAGTTGAGCAAATGATTGCTGATGTCGACAAGGATGGTAGTGGTGCAATTGATTTTGATGAATTTGTACACATGATGACGGCCAAGATAGGGGAGAGGGACACTAAAGAGGATCTCGCGAAAGCATTTAACATACTAGATCAAGATAAAAAT..................................................................................GGGAAAATATCTGCTGCTGATATTCAGCAAATTGCAAAGGAGTTGGGTGAAAATTTCAGCGCAAAAGAAATACAAGAGATGATAGAGGCAGCAGATCGTGATC........................................................................................GTGATGGAGAAGTAAGTGCGGAAGAGTTTATGAGGATGATGAGGAAAACCAGCTTCGCAAACTAGTAGTACAAAACCATATTATTTGTCAAGTTTAAAAAGCTTC-TTTTTTTTTACAAGTTGCTTGTCCTTCTCTTTTTCACTTTTCATATCTATGTACTCTCTTGTATTGTGTATATGTATATAATATATCCACATATATATTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0012A12-ClXVT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U597983" ref_strand="+" ref_description="SGN-U597983 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|115476860|ref|NP_001062026.1| (e_value=8e-22) Os08g0474000; (*ATH) AT5G50080.1 (e_value=3e-22)  Symbol: None | encodes a member of the ERF (ethylene response factor) subfamily B-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily. | chr5:20383174-20384061 FORWARD | Aliases: MPF21... ; (*SWP) sp|Q70II3|EF110_ARATH (e_value=2e-21) Ethylene-responsive transcription factor ERF110 OS=Arabidopsis thaliana GN=ERF110; ">
      <seq>cggccaggggattttcatttacaacaacaaacaaacgagtaatttcattttttcaattatagaactagaaaggggaaataatggataatttatctagctttactcacaaactgactcatcaacaaaaatctcaccacatggtgtcagctctcaaacatgttttctctggagccgccgttgatggtcgagccgacggaaaagctgctcagcttttatgggaagttgaaaatgcagccacgtcaaataattcaatgccacgtaggagtatcaatgttcacccagtacacgtggagttggagttggggaaaaaaaagcaaaggaggaggaggaatacaaaaaaggaatttaggggagtgagacaaagaccatggggaaaatgggccgccaagatccgtgacccgcataaagcccaacgactttggcttggtacgtttgttactgctgaagatgctgctagagcttatgacaaaaaagccgtagagtttagagggaataaggcaaaaacaaactttcctcttaaggaatatattgatgatcacgacaacagttccccagtgatgaaagtggaagaacatgaaaatgaccaaaatgtgatgaatggtgatgagaataataataatggtgatgacttttgggccacattgaaagatgatagacttgtcaaatttatcacgcaggatatgtcccactgatccttaataatttctactattataatgtttttttgtcttacctgaaaaatatcttcttcttgttttgcaggttgtttttgttgtttatttctttttatttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0012A12-ClXVT/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0012A12.1" temp_strand="+" temp_description="C02HBa0012A12.1  AC215355.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0012A12 sequenced_by:kribb upload_account_name:korea">
        <position start="115605" stop="116986"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="115895" g_stop="116686" g_length="792"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="793" r_length="793" r_score="0.971"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0012A12.1" gen_strand="+" ref_id="SGN-U597983" ref_strand="+">
        <total_alignment_score>0.971</total_alignment_score>
        <cumulative_length_of_scored_exons>792</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0012A12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U597983" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="115895" e_stop="116686"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTGATTATTATTTTCATTTACAACAACAAACAAACGAGTAATTTCATTTTTTCAATTATAGAACTAGAAAGGGGAAATAATGGATAATTTATCTAGCTTTACTCACAAACTGACTCATCAACAAGAATCTCACTACATGGTGTCAGCTCTCAAACATGTTTTCTCTGGAGCCGCCGTTGATGGTCGAGCCGACGGAGAAGCTGCTCAGCTTTTATGGGAAGTTGAAAATGCAGCCACGTCAGATAATTCAATGCCACGTAGGAGTATCAATGTTCACCCAGTACACGTGGAGTTGGAGTTGGGGAAGAAGAAGCAGAGGAGGAGGAGGAATACGAAGAAGGAATTTAGGGGAGTGAGACAAAGACCATGGGGAAAATGGGCCGCCGAGATCCGTGACCCGCATAAAGCCCAACGACTTTGGCTTGGTACGTTTGTTACTGCTGAAGATGCTGCTAGAGCTTATGACAAAAAAGCCGTAGAGTTTAGAGGGAATAAGGCAAAAACAAACTTTCCTCTTAAGGAATATATTGATGATCACGACAACAGTTCCCCAATGATGAAAGTGGAAGAACATGAAAATGACCAAAATGTGATGAATGGTGATGAGAATAATAATAATGGTGATGACTTTTGGGCCACATTGGAAGATGATAGACTTGTCAAATTTATCACGCAGGATATGTCCCACTGATCCTTAATAATTTCTACTATTATAATG-TTTTTTGTCTTACCTGAAAAATATCTTCTTCTTGTTTTGCAGGTTGTTTTTGTTGTTTATTTCTTTTTATTTG</genome_strand>
        <mrna_strand>CGGCCAGGGGATTTTCATTTACAACAACAAACAAACGAGTAATTTCATTTTTTCAATTATAGAACTAGAAAGGGGAAATAATGGATAATTTATCTAGCTTTACTCACAAACTGACTCATCAACAAAAATCTCACCACATGGTGTCAGCTCTCAAACATGTTTTCTCTGGAGCCGCCGTTGATGGTCGAGCCGACGGAAAAGCTGCTCAGCTTTTATGGGAAGTTGAAAATGCAGCCACGTCAAATAATTCAATGCCACGTAGGAGTATCAATGTTCACCCAGTACACGTGGAGTTGGAGTTGGGGAAAAAAAAGCAAAGGAGGAGGAGGAATACAAAAAAGGAATTTAGGGGAGTGAGACAAAGACCATGGGGAAAATGGGCCGCCAAGATCCGTGACCCGCATAAAGCCCAACGACTTTGGCTTGGTACGTTTGTTACTGCTGAAGATGCTGCTAGAGCTTATGACAAAAAAGCCGTAGAGTTTAGAGGGAATAAGGCAAAAACAAACTTTCCTCTTAAGGAATATATTGATGATCACGACAACAGTTCCCCAGTGATGAAAGTGGAAGAACATGAAAATGACCAAAATGTGATGAATGGTGATGAGAATAATAATAATGGTGATGACTTTTGGGCCACATTGAAAGATGATAGACTTGTCAAATTTATCACGCAGGATATGTCCCACTGATCCTTAATAATTTCTACTATTATAATGTTTTTTTGTCTTACCTGAAAAATATCTTCTTCTTGTTTTGCAGGTTGTTTTTGTTGTTTATTTCTTTTTATTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0012A12-ClXVT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U568407" ref_strand="+" ref_description="SGN-U568407 Tomato 200607#2 [17 ESTs aligned] (*GB) gi|157345112|emb|CAO71840.1| (e_value=2e-107) unnamed; (*ATH) AT3G50370.1 (e_value=1e-48) | Symbol: None | expressed protein | chr3:18687041-18694926 REVERSE | Aliases: F11C1.210; ">
      <seq>gcccctgttgggtggtcctatttttgccttcggtccacataaggaatcgggtggctcccaatcacagtcgcagaaagctactgtgtctagctcaggtccacttggtgcatggcaacaatgccattctacgttagactcattctacggtcatccagcaggtttcactggccctttcataagcccacctggaggtatcccgggagttcaaggtcctccgcacatggtggtctataatcattttgctccagttggacagtatggccaggttggattaagctttatgggtaccacttatttaccttctggaaagcagcctgattggaagcacacaccctcatcctccgcaatgggtatcaacgaggcggatatgaataacgtaaatattgctggttctcagcgaaatttatcgaatatgccttctaccgtgcagcaccttggccctgcttcatcaattatgcccatagctgcttctcctctggccatgtttgatgtttctcctttccagtcttcaccagaaatgccagtccaagctcgctggtctcatgtccctgcatcgcctcttcattctgttcccatttctcaccccttgcagcagcaagctgaaggtgcattgcctcctaaatttggtcacggtcattctgttgataagtcattgagtaccaataggttcttggaatctcatcctccagaagactctgatggtacccccagttttaatattgcgacagttgccaatgcagctcagtttcctgttgaaattggtcttggagattcctccaagccaggggttactggtggttctgctcagagtttggccagtcaaagctcctctggatgtgctaatgcagaaacaggcaacattgatgctctcagaaatggtgtcagcaacagtggtaaagatcaaagtgtcagtggtttcagaacgcagacccagcagaagaatacctctgcaggctacaactatcacaggggtggtggaatgtctcagagaaatatggctggaaatgattggtcccatcgcagaatgggtttccatggcagaaatcagtccttgggtgcggttccatctactaaggtgaaacaaatatatgtggctaagcaaacccttggtgggtcaaaaaccacgggatgagaaaccacatggttgtttagtgatcttgataggtaaggatctgttattgagtgaatatatgtcgtgggacaatcaagctagttctggtgcctatggcctctgaaaataacttaatttggactttagataattggttggtgattatagtgatcctctcaattttgtccggaatatggatttactagtggtttggctgctgagatttgaaattaaactgtgcccggctgttatctgcaaaattttcgtcatctgcttattgctttggcttccattctttgaacaagctatctgttaacattagtagaatgctcttgttttgcctggaaactggaatgtttggaactttactcagtcattggcactgtataatgataactaagtggttggagttctctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0012A12-ClXVT/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0012A12.1" temp_strand="-" temp_description="C02HBa0012A12.1  AC215355.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0012A12 sequenced_by:kribb upload_account_name:korea">
        <position start="120317" stop="117914"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="120018" g_stop="119514" g_length="505"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="505" r_length="505" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="119513" i_stop="119237" i_length="277">
            <donor d_prob="0.669" d_score="1.00"/>
            <acceptor a_prob="0.856" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="119236" g_stop="118214" g_length="1023"/>
          <reference_exon_boundary r_type="cDNA" r_start="506" r_stop="1528" r_length="1023" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0012A12.1" gen_strand="-" ref_id="SGN-U568407" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>1528</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0012A12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U568407" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="120018" e_stop="119514"/>
          <exon e_start="119236" e_stop="118214"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCCGTGTTGGGTGGTCCTATTTTTGCCTTCGGTCCACATAAGGAATCGGGTGGCTCCCAATCACAGTCGCAGAAAGCTACTGTGTCTAGCTCAGGTCCACTTGGTGCATGGCAACAATGCCATTCTACGTTAGACTCATTCTACGGTCATCCAGCAGGTTTCACTGGCCCTTTCATAAGCCCACCTGGAGGTATCCCGGGAGTTCAAGGTCCTCCGCACATGGTGGTCTATAATCATTTTGCTCCAGTTGGACAGTATGGCCAGGTTGGATTAAGCTTTATGGGTACCACTTATTTACCTTCTGGAAAGCAGCCTGATTGGAAGCACACACCCTCATCCTCCGCAATGGGTATCAACGAGGCGGATATGAATAACGTAAATATTGCTGGTTCTCAGCGAAATTTATCGAATATGCCTTCTACCGTGCAGCACCTTGGCCCTGCTTCATCAATTATGCCCATAGCTGCTTCTCCTCTGGCCATGTTTGATGTTTCTCCTTTCCAGGTAAAGAATGCCATGCCATCAATTGATGATAACAAAAAAAGAGGGCTTGTAGAATCTTTCACCCCATCATAGTGGAGTTACTTGTCAATTTTAGTTGCTCACTTCTTTTTAATTTTAAAATAATCATAATTGTGTTCATTTCTTTCATCTTGTGAAGACCTATTGATTAATTTCTAAGAATATGAACTCTGTCATGCCTTAGATTTTTGTTATATGATCTATTAGTGCAAGCAGTTCTCTCATATAACATTTTACTTCGCTTTTTGTTTCAACTCAGTCTTCACCAGAAATGCCAGTCCAAGCTCGCTGGTCTCATGTCCCTGCATCGCCTCTTCATTCTGTTCCCATTTCTCACCCCTTGCAGCAGCAAGCTGAAGGTGCATTGCCTCCTAAATTTGGTCACGGTCATTCTGTTGATAAGTCATTGAGTACCAATAGGTTCTTGGAATCTCATCCTCCAGAAGACTCTGATGGTACCCCCAGTTTTAATATTGCGACAGTTGCCAATGCAGCTCAGTTTCCTGTTGAAATTGGTCTTGGAGATTCCTCCAAGCCAGGGGTTACTGGTGGTTCTGCTCAGAGTTTGGCCAGTCAAAGCTCCTCTGGATGTGCTAATGCAGAAACAGGCAACATTGATGCTCTCAGAAATGGTGTCAGCAACAGTGGTAAAGATCAAAGTGTCAGTGGTTTCAGAACGCAGACCCAGCAGAAGAATACCTCTGCAGGCTACAACTATCACAGGGGTGGTGGAATGTCTCAGAGAAATATGGCTGGAAATGATTGGTCCCATCGCAGAATGGGTTTCCATGGCAGAAATCAGTCCTTGGGTGCGGTTCCATCTACTAAGGTGAAACAAATATATGTGGCTAAGCAAACCCTTGGTGGGTCAAAAACCACGGGATGAGAAACCACATGGTTGTTTAGTGATCTTGATAGGTAAGGATCTGTTATTGAGTGAATATATGTCGTGGGACAATCAAGCTAGTTCTGGTGCCTATGGCCTCTGAAAATAACTTAATTTGGACTTTAGATAATTGGTTGGTGATTATAGTGATCCTCTCAATTTTGTCCGGAATATGGATTTACTAGTGGTTTGGCTGCTGAGATTTGAAATTAAACTGTGCCCGGCTGTTATCTGCAAAATTTTCGTCATCTGCTTATTGCTTTGGCTTCCATTCTTTGAACAAGCTATCTGTTAACATTAGTAGAATGCTCTTGTTTTGCCTGGAAACTGGAATGTTTGGAACTTTACTCAGTCATTGGCACTGTATAATGATAACTAAGTGGTTGGAGTTCTCTT</genome_strand>
        <mrna_strand>GCCCCTGTTGGGTGGTCCTATTTTTGCCTTCGGTCCACATAAGGAATCGGGTGGCTCCCAATCACAGTCGCAGAAAGCTACTGTGTCTAGCTCAGGTCCACTTGGTGCATGGCAACAATGCCATTCTACGTTAGACTCATTCTACGGTCATCCAGCAGGTTTCACTGGCCCTTTCATAAGCCCACCTGGAGGTATCCCGGGAGTTCAAGGTCCTCCGCACATGGTGGTCTATAATCATTTTGCTCCAGTTGGACAGTATGGCCAGGTTGGATTAAGCTTTATGGGTACCACTTATTTACCTTCTGGAAAGCAGCCTGATTGGAAGCACACACCCTCATCCTCCGCAATGGGTATCAACGAGGCGGATATGAATAACGTAAATATTGCTGGTTCTCAGCGAAATTTATCGAATATGCCTTCTACCGTGCAGCACCTTGGCCCTGCTTCATCAATTATGCCCATAGCTGCTTCTCCTCTGGCCATGTTTGATGTTTCTCCTTTCCAG.....................................................................................................................................................................................................................................................................................TCTTCACCAGAAATGCCAGTCCAAGCTCGCTGGTCTCATGTCCCTGCATCGCCTCTTCATTCTGTTCCCATTTCTCACCCCTTGCAGCAGCAAGCTGAAGGTGCATTGCCTCCTAAATTTGGTCACGGTCATTCTGTTGATAAGTCATTGAGTACCAATAGGTTCTTGGAATCTCATCCTCCAGAAGACTCTGATGGTACCCCCAGTTTTAATATTGCGACAGTTGCCAATGCAGCTCAGTTTCCTGTTGAAATTGGTCTTGGAGATTCCTCCAAGCCAGGGGTTACTGGTGGTTCTGCTCAGAGTTTGGCCAGTCAAAGCTCCTCTGGATGTGCTAATGCAGAAACAGGCAACATTGATGCTCTCAGAAATGGTGTCAGCAACAGTGGTAAAGATCAAAGTGTCAGTGGTTTCAGAACGCAGACCCAGCAGAAGAATACCTCTGCAGGCTACAACTATCACAGGGGTGGTGGAATGTCTCAGAGAAATATGGCTGGAAATGATTGGTCCCATCGCAGAATGGGTTTCCATGGCAGAAATCAGTCCTTGGGTGCGGTTCCATCTACTAAGGTGAAACAAATATATGTGGCTAAGCAAACCCTTGGTGGGTCAAAAACCACGGGATGAGAAACCACATGGTTGTTTAGTGATCTTGATAGGTAAGGATCTGTTATTGAGTGAATATATGTCGTGGGACAATCAAGCTAGTTCTGGTGCCTATGGCCTCTGAAAATAACTTAATTTGGACTTTAGATAATTGGTTGGTGATTATAGTGATCCTCTCAATTTTGTCCGGAATATGGATTTACTAGTGGTTTGGCTGCTGAGATTTGAAATTAAACTGTGCCCGGCTGTTATCTGCAAAATTTTCGTCATCTGCTTATTGCTTTGGCTTCCATTCTTTGAACAAGCTATCTGTTAACATTAGTAGAATGCTCTTGTTTTGCCTGGAAACTGGAATGTTTGGAACTTTACTCAGTCATTGGCACTGTATAATGATAACTAAGTGGTTGGAGTTCTCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>20</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="+" PGL_start="2367" PGL_stop="9618"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="2367" e_stop="2772"/>
            <exon e_start="2855" e_stop="2944"/>
            <exon e_start="4862" e_stop="4927"/>
            <exon e_start="5106" e_stop="5171"/>
            <exon e_start="5440" e_stop="5525"/>
            <exon e_start="5620" e_stop="5665"/>
            <exon e_start="5772" e_stop="5826"/>
            <exon e_start="7053" e_stop="7129"/>
            <exon e_start="7246" e_stop="7387"/>
            <exon e_start="7598" e_stop="7758"/>
            <exon e_start="7863" e_stop="7967"/>
            <exon e_start="8521" e_stop="8673"/>
            <exon e_start="9264" e_stop="9618"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.960" acc_prob="0.999" e_score="0.985"/>
          <exon-intron don_prob="0.902" acc_prob="0.872" e_score="1.000"/>
          <exon-intron don_prob="0.993" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.972" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.885" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.899" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.954" e_score="1.000"/>
          <exon-intron don_prob="0.585" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.982" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="0.980"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.985">
            <gDNA_exon_boundary e_start="2367" e_stop="2772" e_length="406"/>
          </exon>
          <intron i_serial="1" don_prob="0.960" acc_prob="0.999">
            <gDNA_intron_boundary i_start="2773" i_stop="2854" i_length="82"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="2855" e_stop="2944" e_length="90"/>
          </exon>
          <intron i_serial="2" don_prob="0.902" acc_prob="0.872">
            <gDNA_intron_boundary i_start="2945" i_stop="4861" i_length="1917"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="4862" e_stop="4927" e_length="66"/>
          </exon>
          <intron i_serial="3" don_prob="0.993" acc_prob="0.998">
            <gDNA_intron_boundary i_start="4928" i_stop="5105" i_length="178"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="5106" e_stop="5171" e_length="66"/>
          </exon>
          <intron i_serial="4" don_prob="0.972" acc_prob="1.000">
            <gDNA_intron_boundary i_start="5172" i_stop="5439" i_length="268"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="5440" e_stop="5525" e_length="86"/>
          </exon>
          <intron i_serial="5" don_prob="0.885" acc_prob="1.000">
            <gDNA_intron_boundary i_start="5526" i_stop="5619" i_length="94"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="5620" e_stop="5665" e_length="46"/>
          </exon>
          <intron i_serial="6" don_prob="0.899" acc_prob="0.996">
            <gDNA_intron_boundary i_start="5666" i_stop="5771" i_length="106"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="5772" e_stop="5826" e_length="55"/>
          </exon>
          <intron i_serial="7" don_prob="0.999" acc_prob="0.995">
            <gDNA_intron_boundary i_start="5827" i_stop="7052" i_length="1226"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="7053" e_stop="7129" e_length="77"/>
          </exon>
          <intron i_serial="8" don_prob="0.998" acc_prob="0.954">
            <gDNA_intron_boundary i_start="7130" i_stop="7245" i_length="116"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="7246" e_stop="7387" e_length="142"/>
          </exon>
          <intron i_serial="9" don_prob="0.585" acc_prob="0.997">
            <gDNA_intron_boundary i_start="7388" i_stop="7597" i_length="210"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="7598" e_stop="7758" e_length="161"/>
          </exon>
          <intron i_serial="10" don_prob="0.982" acc_prob="0.993">
            <gDNA_intron_boundary i_start="7759" i_stop="7862" i_length="104"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="7863" e_stop="7967" e_length="105"/>
          </exon>
          <intron i_serial="11" don_prob="0.999" acc_prob="1.000">
            <gDNA_intron_boundary i_start="7968" i_stop="8520" i_length="553"/>
          </intron>
          <exon e_serial="12" e_score="1.000">
            <gDNA_exon_boundary e_start="8521" e_stop="8673" e_length="153"/>
          </exon>
          <intron i_serial="12" don_prob="0.994" acc_prob="0.999">
            <gDNA_intron_boundary i_start="8674" i_stop="9263" i_length="590"/>
          </intron>
          <exon e_serial="13" e_score="0.980">
            <gDNA_exon_boundary e_start="9264" e_stop="9618" e_length="355"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2367" stop="2772"/>
              <exon start="2855" stop="2944"/>
              <exon start="4862" stop="4927"/>
              <exon start="5106" stop="5171"/>
              <exon start="5440" stop="5525"/>
              <exon start="5620" stop="5665"/>
              <exon start="5772" stop="5826"/>
              <exon start="7053" stop="7129"/>
              <exon start="7246" stop="7387"/>
              <exon start="7598" stop="7758"/>
              <exon start="7863" stop="7967"/>
              <exon start="8521" stop="8673"/>
              <exon start="9264" stop="9618"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U570151" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAGAGCAGTGGCTTGGGGTTTGAAGGAGCTGAGCGGCGCGAGGAAGAGCGAGCGGAGCGGAGTGAGAGAGCGAATTAGGGTTTTGATAATCGGAATCAAGAAGGTCAGTGGAGCGCGTAAATCTAATTTAGTACTCGTTGTGATTTTAATTTCTTTGGTATCCGAAGATCTTAGAGAAATTGGTGAGTTTGTTCTGAAATATGATGATGATGATGATATTTGTGTGTGAGAAAGAGGTGTGTGTCTGTTACCTGCAGGAAGAATCGTCTTGTGTGAGCGATTCGTTTATAGAGAGAGGTGTGGTGAGATCGCGAGAGCGAGTTGAGTGTATATCCTACGATTTCCACTCTCCGCTAATCAATTTGTCAGACAAGTTTTCGTTACCATGTCGGAGAAGAAGCTTGTG : GTTTTAGGCATCCCATGGGACGTGGATACAGAAGGTCTAAGGGAATATATGATCAAATATGGAGATTTAGAGGATTGTATTGTGATGAAG : GAACGTGCTACTGGTCGTTCTCGTGGATTCGGCTATGTCACATTTGCTACAGTTGAGGATGCTAAG : AATGCATTGTCTAAGGAGCACTTTCTTGGAAACAGAATGCTAGAAGTGAAAGTGGCGACACCGAAG : GAGGAGATGAGGGCTCCTGCAAAGAAAGTGACCAGGATTTTCGTTGCTAGGATTCCTCCGTCTGTGTCTGAAGCTACTTTCAGAGG : TTATTTTGAGAAGTACGGTGAAATAACAGATCTGTACATGCCAAAG : GATCCATCTACCAAGGGACATCGTGGAATTGGGTTTATTACTTTTGCAAATGCTG : AATCAGTTGATGATCTGATGAGTGACACCCATGAACTGGGAGGTTCCACAATTGTGGTGGACCGAGCAACACCCAAG : GAAGAAGATTTCAGACCTGTTAGTCGGATGTCTCAGAGTGGAGGAGGATATGGTGCATATAATGCATATATGAGTGCAACTACTAGATATGGTGCGCTTGGTGCTCCTACCTTATATGATCATCCTAGTTCTATGTATGGAA : GAGGTGGAGGTGGAGGTGGAGGTGGAGGTGGAGGATTTCCATCTCGTGGTGGCTTGGGCCAGAAGATCTTTGTTGGTCGACTACCTCAAGAGGCAACAACTGAAGATCTTCGCCAGTATTTTGGTAGATTTGGCCGTGTTTTAGATGTGTATGTCCCAAAG : GATCCAAGAAGACCAGGGCATAGAGGGTTTGGTTTTGTTACATTTGCTGATGATGGTGTTGCAGATCGTGTTTCTCGAAGGCCTCATGAGATATGTGGACATCAG : GTTGCAATTGATTCTGCTACTCCTCTTGATGATGCTGGTCCAAGTAACAATTACATGATGGATCCTCCTCCTCCTGCTCCTGAAGCATATGGGGGATATGGTGGTCCTATGCGTACTTATGGAAGGATGTATGGGGGCCTAGATTATGATGAT : TGGGGTTACGGCCTGGGTGGTGGGAGACCTTCAAGATCAGATATGAGATACAGGCCCTACTAGCTGGCCTGGTTGGATAGGAGGCGGTCAAGATCAGATATGAGATTCAGGCCCTAGTAGCTTTGTGTTGCAGGAGGTCAGAGGCTGTCTGAATTTCCAATGGGTGACAACAATAGATATGTCATATTTATATCAGTTTATTATTAGGTGGACATCATAATACATGTGCTACTAATACTTAAGTAATTGAAAAAGCAGTGCTGATGGATTGTGCAATTCACTTCATACTTGATCCTTTGTATTAAATGTATTGAAGAAACAAAGAATGGGTGCTAATTCCATATCCAGGAGTAGA</gDNA_template>
            <first_frame> K  S  S  G  L  G  F  E  G  A  E  R  R  E  E  E  R  A  E  R  S  E  R  A  N  *  G  F  D  N  R  N  Q  E  G  Q  W  S  A  *  I  *  F  S  T  R  C  D  F  N  F  F  G  I  R  R  S  *  R  N  W  *  V  C  S  E  I  *  *  *  *  *  Y  L  C  V  R  K  R  C  V  S  V  T  C  R  K  N  R  L  V  *  A  I  R  L  *  R  E  V  W  *  D  R  E  S  E  L  S  V  Y  P  T  I  S  T  L  R  *  S  I  C  Q  T  S  F  R  Y  H  V  G  E  E  A  C   : G  F  R  H  P  M  G  R  G  Y  R  R  S  K  G  I  Y  D  Q  I  W  R  F  R  G  L  Y  C  D  E   : G  T  C  Y  W  S  F  S  W  I  R  L  C  H  I  C  Y  S  *  G  C  *   : E  C  I  V  *  G  A  L  S  W  K  Q  N  A  R  S  E  S  G  D  T  E   : G  G  D  E  G  S  C  K  E  S  D  Q  D  F  R  C  *  D  S  S  V  C  V  *  S  Y  F  Q  R  :  L  F  *  E  V  R  *  N  N  R  S  V  H  A  K   : G  S  I  Y  Q  G  T  S  W  N  W  V  Y  Y  F  C  K  C  * :   I  S  *  *  S  D  E  *  H  P  *  T  G  R  F  H  N  C  G  G  P  S  N  T  Q   : G  R  R  F  Q  T  C  *  S  D  V  S  E  W  R  R  I  W  C  I  *  C  I  Y  E  C  N  Y  *  I  W  C  A  W  C  S  Y  L  I  *  S  S  *  F  Y  V  W  K :   R  W  R  W  R  W  R  W  R  W  R  I  S  I  S  W  W  L  G  P  E  D  L  C  W  S  T  T  S  R  G  N  N  *  R  S  S  P  V  F  W  *  I  W  P  C  F  R  C  V  C  P  K   : G  S  K  K  T  R  A  *  R  V  W  F  C  Y  I  C  *  *  W  C  C  R  S  C  F  S  K  A  S  *  D  M  W  T  S   : G  C  N  *  F  C  Y  S  S  *  *  C  W  S  K  *  Q  L  H  D  G  S  S  S  S  C  S  *  S  I  W  G  I  W  W  S  Y  A  Y  L  W  K  D  V  W  G  P  R  L  *  *   : L  G  L  R  P  G  W  W  E  T  F  K  I  R  Y  E  I  Q  A  L  L  A  G  L  V  G  *  E  A  V  K  I  R  Y  E  I  Q  A  L  V  A  L  C  C  R  R  S  E  A  V  *  I  S  N  G  *  Q  Q  *  I  C  H  I  Y  I  S  L  L  L  G  G  H  H  N  T  C  A  T  N  T  *  V  I  E  K  A  V  L  M  D  C  A  I  H  F  I  L  D  P  L  Y  *  M  Y  *  R  N  K  E  W  V  L  I  P  Y  P  G  V   </first_frame>
            <second_frame>  R  A  V  A  W  G  L  K  E  L  S  G  A  R  K  S  E  R  S  G  V  R  E  R  I  R  V  L  I  I  G  I  K  K  V  S  G  A  R  K  S  N  L  V  L  V  V  I  L  I  S  L  V  S  E  D  L  R  E  I  G  E  F  V  L  K  Y  D  D  D  D  D  I  C  V  *  E  R  G  V  C  L  L  P  A  G  R  I  V  L  C  E  R  F  V  Y  R  E  R  C  G  E  I  A  R  A  S  *  V  Y  I  L  R  F  P  L  S  A  N  Q  F  V  R  Q  V  F  V  T  M  S  E  K  K  L  V  :  V  L  G  I  P  W  D  V  D  T  E  G  L  R  E  Y  M  I  K  Y  G  D  L  E  D  C  I  V  M  K  :  E  R  A  T  G  R  S  R  G  F  G  Y  V  T  F  A  T  V  E  D  A  K  :  N  A  L  S  K  E  H  F  L  G  N  R  M  L  E  V  K  V  A  T  P  K  :  E  E  M  R  A  P  A  K  K  V  T  R  I  F  V  A  R  I  P  P  S  V  S  E  A  T  F  R  G :   Y  F  E  K  Y  G  E  I  T  D  L  Y  M  P  K  :  D  P  S  T  K  G  H  R  G  I  G  F  I  T  F  A  N  A   : E  S  V  D  D  L  M  S  D  T  H  E  L  G  G  S  T  I  V  V  D  R  A  T  P  K  :  E  E  D  F  R  P  V  S  R  M  S  Q  S  G  G  G  Y  G  A  Y  N  A  Y  M  S  A  T  T  R  Y  G  A  L  G  A  P  T  L  Y  D  H  P  S  S  M  Y  G   : R  G  G  G  G  G  G  G  G  G  G  G  F  P  S  R  G  G  L  G  Q  K  I  F  V  G  R  L  P  Q  E  A  T  T  E  D  L  R  Q  Y  F  G  R  F  G  R  V  L  D  V  Y  V  P  K  :  D  P  R  R  P  G  H  R  G  F  G  F  V  T  F  A  D  D  G  V  A  D  R  V  S  R  R  P  H  E  I  C  G  H  Q  :  V  A  I  D  S  A  T  P  L  D  D  A  G  P  S  N  N  Y  M  M  D  P  P  P  P  A  P  E  A  Y  G  G  Y  G  G  P  M  R  T  Y  G  R  M  Y  G  G  L  D  Y  D  D  :  W  G  Y  G  L  G  G  G  R  P  S  R  S  D  M  R  Y  R  P  Y  *  L  A  W  L  D  R  R  R  S  R  S  D  M  R  F  R  P  *  *  L  C  V  A  G  G  Q  R  L  S  E  F  P  M  G  D  N  N  R  Y  V  I  F  I  S  V  Y  Y  *  V  D  I  I  I  H  V  L  L  I  L  K  *  L  K  K  Q  C  *  W  I  V  Q  F  T  S  Y  L  I  L  C  I  K  C  I  E  E  T  K  N  G  C  *  F  H  I  Q  E  *  </second_frame>
            <third_frame>   E  Q  W  L  G  V  *  R  S  *  A  A  R  G  R  A  S  G  A  E  *  E  S  E  L  G  F  *  *  S  E  S  R  R  S  V  E  R  V  N  L  I  *  Y  S  L  *  F  *  F  L  W  Y  P  K  I  L  E  K  L  V  S  L  F  *  N  M  M  M  M  M  I  F  V  C  E  K  E  V  C  V  C  Y  L  Q  E  E  S  S  C  V  S  D  S  F  I  E  R  G  V  V  R  S  R  E  R  V  E  C  I  S  Y  D  F  H  S  P  L  I  N  L  S  D  K  F  S  L  P  C  R  R  R  S  L  W :   F  *  A  S  H  G  T  W  I  Q  K  V  *  G  N  I  *  S  N  M  E  I  *  R  I  V  L  *  *  R :   N  V  L  L  V  V  L  V  D  S  A  M  S  H  L  L  Q  L  R  M  L  R :   M  H  C  L  R  S  T  F  L  E  T  E  C  *  K  *  K  W  R  H  R  R :   R  R  *  G  L  L  Q  R  K  *  P  G  F  S  L  L  G  F  L  R  L  C  L  K  L  L  S  E   : V  I  L  R  S  T  V  K  *  Q  I  C  T  C  Q  R :   I  H  L  P  R  D  I  V  E  L  G  L  L  L  L  Q  M  L  :  N  Q  L  M  I  *  *  V  T  P  M  N  W  E  V  P  Q  L  W  W  T  E  Q  H  P  R :   K  K  I  S  D  L  L  V  G  C  L  R  V  E  E  D  M  V  H  I  M  H  I  *  V  Q  L  L  D  M  V  R  L  V  L  L  P  Y  M  I  I  L  V  L  C  M  E  :  E  V  E  V  E  V  E  V  E  V  E  D  F  H  L  V  V  A  W  A  R  R  S  L  L  V  D  Y  L  K  R  Q  Q  L  K  I  F  A  S  I  L  V  D  L  A  V  F  *  M  C  M  S  Q  R :   I  Q  E  D  Q  G  I  E  G  L  V  L  L  H  L  L  M  M  V  L  Q  I  V  F  L  E  G  L  M  R  Y  V  D  I  R :   L  Q  L  I  L  L  L  L  L  M  M  L  V  Q  V  T  I  T  *  W  I  L  L  L  L  L  L  K  H  M  G  D  M  V  V  L  C  V  L  M  E  G  C  M  G  A  *  I  M  M  I :   G  V  T  A  W  V  V  G  D  L  Q  D  Q  I  *  D  T  G  P  T  S  W  P  G  W  I  G  G  G  Q  D  Q  I  *  D  S  G  P  S  S  F  V  L  Q  E  V  R  G  C  L  N  F  Q  W  V  T  T  I  D  M  S  Y  L  Y  Q  F  I  I  R  W  T  S  *  Y  M  C  Y  *  Y  L  S  N  *  K  S  S  A  D  G  L  C  N  S  L  H  T  *  S  F  V  L  N  V  L  K  K  Q  R  M  G  A  N  S  I  S  R  S  R </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0012A12.1" strand="+"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="2692" stop="2772"/>
                    <exon start="2855" stop="2944"/>
                    <exon start="4862" stop="4927"/>
                    <exon start="5106" stop="5171"/>
                    <exon start="5440" stop="5525"/>
                    <exon start="5620" stop="5665"/>
                    <exon start="5772" stop="5826"/>
                    <exon start="7053" stop="7129"/>
                    <exon start="7246" stop="7387"/>
                    <exon start="7598" stop="7758"/>
                    <exon start="7863" stop="7967"/>
                    <exon start="8521" stop="8673"/>
                    <exon start="9264" stop="9326"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1188</number_coding_nucleotides>
                  <number_encoded_amino_acids>396</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VYILRFPLSANQFVRQVFVTMSEKKLVVLGIPWDVDTEGLREYMIKYGDLEDCIVMKERATGRSRGFGYVTFATVEDAKNALSKEHFLGNRMLEVKVATPKEEMRAPAKKVTRIFVARIPPSVSEATFRGYFEKYGEITDLYMPKDPSTKGHRGIGFITFANAESVDDLMSDTHELGGSTIVVDRATPKEEDFRPVSRMSQSGGGYGAYNAYMSATTRYGALGAPTLYDHPSSMYGRGGGGGGGGGGGFPSRGGLGQKIFVGRLPQEATTEDLRQYFGRFGRVLDVYVPKDPRRPGHRGFGFVTFADDGVADRVSRRPHEICGHQVAIDSATPLDDAGPSNNYMMDPPPPAPEAYGGYGGPMRTYGRMYGGLDYDDWGYGLGGGRPSRSDMRYRPY*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0012A12.1" strand="+"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="2368" stop="2595"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>225</number_coding_nucleotides>
                  <number_encoded_amino_acids>75</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RAVAWGLKELSGARKSERSGVRERIRVLIIGIKKVSGARKSNLVLVVILISLVSEDLREIGEFVLKYDDDDDICV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="-" PGL_start="9664" PGL_stop="9350"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="9664" e_stop="9350"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.946"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.946">
            <gDNA_exon_boundary e_start="9664" e_stop="9350" e_length="315"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="9664" stop="9350"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U570150" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGGTATAAAACATAATTTGCTATATTGCTTCACTACCAACTATGTTTCTACTCCTGGATATGGAATTAGCACCCATTCTTTGTTTCTTCAATACATTTAATACAAAGGATCAAGTATGAAGTGAATTGCACAATCCATCAGCACTGCTTTTTCAATTACTTAAGTATTAGTAGCACATGTATTATGATGTCCACCTAATAATAAACTGATATAAATATGACATATCTATTGTTGTCACCCATTGGAAATTCAGACAGCCTCTGACCTCCTGCAACACAAAGCTACTAGGGCCTGAATCTCATATCTGATCTTGAC</gDNA_template>
            <first_frame> R  Y  K  T  *  F  A  I  L  L  H  Y  Q  L  C  F  Y  S  W  I  W  N  *  H  P  F  F  V  S  S  I  H  L  I  Q  R  I  K  Y  E  V  N  C  T  I  H  Q  H  C  F  F  N  Y  L  S  I  S  S  T  C  I  M  M  S  T  *  *  *  T  D  I  N  M  T  Y  L  L  L  S  P  I  G  N  S  D  S  L  *  P  P  A  T  Q  S  Y  *  G  L  N  L  I  S  D  L  D </first_frame>
            <second_frame>  G  I  K  H  N  L  L  Y  C  F  T  T  N  Y  V  S  T  P  G  Y  G  I  S  T  H  S  L  F  L  Q  Y  I  *  Y  K  G  S  S  M  K  *  I  A  Q  S  I  S  T  A  F  S  I  T  *  V  L  V  A  H  V  L  *  C  P  P  N  N  K  L  I  *  I  *  H  I  Y  C  C  H  P  L  E  I  Q  T  A  S  D  L  L  Q  H  K  A  T  R  A  *  I  S  Y  L  I  L   </second_frame>
            <third_frame>   V  *  N  I  I  C  Y  I  A  S  L  P  T  M  F  L  L  L  D  M  E  L  A  P  I  L  C  F  F  N  T  F  N  T  K  D  Q  V  *  S  E  L  H  N  P  S  A  L  L  F  Q  L  L  K  Y  *  *  H  M  Y  Y  D  V  H  L  I  I  N  *  Y  K  Y  D  I  S  I  V  V  T  H  W  K  F  R  Q  P  L  T  S  C  N  T  K  L  L  G  P  E  S  H  I  *  S  *  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0012A12.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="-" PGL_start="13204" PGL_stop="10152"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="13204" e_stop="13144"/>
            <exon e_start="12468" e_stop="11874"/>
            <exon e_start="11171" e_stop="10862"/>
            <exon e_start="10562" e_stop="10481"/>
            <exon e_start="10392" e_stop="10152"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.000" e_score="0.984"/>
          <exon-intron don_prob="0.991" acc_prob="0.995" e_score="0.997"/>
          <exon-intron don_prob="0.934" acc_prob="0.986" e_score="1.000"/>
          <exon-intron don_prob="0.844" acc_prob="0.876" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.984">
            <gDNA_exon_boundary e_start="13204" e_stop="13144" e_length="61"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.000">
            <gDNA_intron_boundary i_start="13143" i_stop="12469" i_length="675"/>
          </intron>
          <exon e_serial="2" e_score="0.997">
            <gDNA_exon_boundary e_start="12468" e_stop="11874" e_length="595"/>
          </exon>
          <intron i_serial="2" don_prob="0.991" acc_prob="0.995">
            <gDNA_intron_boundary i_start="11873" i_stop="11172" i_length="702"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="11171" e_stop="10862" e_length="310"/>
          </exon>
          <intron i_serial="3" don_prob="0.934" acc_prob="0.986">
            <gDNA_intron_boundary i_start="10861" i_stop="10563" i_length="299"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="10562" e_stop="10481" e_length="82"/>
          </exon>
          <intron i_serial="4" don_prob="0.844" acc_prob="0.876">
            <gDNA_intron_boundary i_start="10480" i_stop="10393" i_length="88"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="10392" e_stop="10152" e_length="241"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="13204" stop="13144"/>
              <exon start="12468" stop="11874"/>
              <exon start="11171" stop="10862"/>
              <exon start="10562" stop="10481"/>
              <exon start="10392" stop="10152"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U562963" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TGAGCACCACAACTCAAAGTTGGTAAAAGCCTGAACTCTTCTGCATTAGCAGTAGTTAAAG : GGTTATTGTTCCAAGATTTATGTGGCATGCAATTTGCCATTATTGAGAATCATGAAGCAGAATTCTACTTCCTTGAGGAATTCGGGTTTATATACAAGCCCAGCAACACCAGAATATGGAGATAATAATGTTAGAGGATTTCAGAAGGGATGGAGTTCTGAACGAGTCCCGTTGCCGACTAACAGCGGCAGGAGGCATATTAGTACTACTGCATTGATGCCTTTCAATAGTGGAAGGACAGTGCCTTCAAAATGGGATGATGCTGAAAGGTGGATTACTAGCCCAGTGTCAAGTTATGGTGTTTGGAGGACTCCAAACGCACAAACCTACAGGGGCCCCAAGTCTAAAAGTGGACCTCTTGGGCCACCTGGCCTAATGTATTTACCGAACTATTCGCCCTCTATGCCAGTCCTTGAAAGTGGAGGTATAAGTAACTTCATTGCAAATTCACCATTTACAACTGGTGTACTGGTGCCTGATGGGGTATCCATTCATTATGGTGCTGGTGAATATGCTCAGAATAGTATGGCTCGAGCAACCAGTGCTCCCGGTCTGTCAGATTTGTTCAGTGAATCTTCAGTACCAAGCTCTCCAG : ATGATGTCACAAAGGAGCCAGATTCTATTTCCTTTGCAGTTTTGAGGAGAGACATGGCAACACAAATGAGCTCTGATGACAGTACACATACATCTCCCCAGGAAAGGTCATCTTCAATCCCTCCTGGAGTGGAGCAGAGCAGGCAGCATTCCACTAAAGTCGAGATTAGAGACGTGCAGGTTGACAAAGGAGACCCAATTTTAGGGCTATCTCGGAAAAGCCGGGTGAGGAAACCCAAGAAACAATTACCAGACATAAGTTCGCCTATCTCAACGTGGGATGTTGTAGATGGAACAAAGAGTATGACAAA : GTCGCAAAGAGAGGAAGCCAGGATCGCTGCTTGGGAGAACTTGCAGAAGGCCAAAGCAGAAGCAGAAATCCAAAAGCTTGAG : ATGAAACTAGAAAAGAGGAGGTCAGCATCCATGGATAAGATTCTGAACAAGCTTAGACACGCTCAGGTGAAGGCCCAAAATATGAGACGTGCAACTTCGGAGAGTCAGCCTAGAAGGGATTCCCACAGAATCATTCCATTTCGGGAGTATTTCAAGATTACATCATTTAGCAGTTGCTTTGTTTGCCGTATCCCTTGATTTTGTGTACAGGCATGAGGCTTTCTGAAGTAAAATTCAAGTC</gDNA_template>
            <first_frame> *  A  P  Q  L  K  V  G  K  S  L  N  S  S  A  L  A  V  V  K   : G  L  L  F  Q  D  L  C  G  M  Q  F  A  I  I  E  N  H  E  A  E  F  Y  F  L  E  E  F  G  F  I  Y  K  P  S  N  T  R  I  W  R  *  *  C  *  R  I  S  E  G  M  E  F  *  T  S  P  V  A  D  *  Q  R  Q  E  A  Y  *  Y  Y  C  I  D  A  F  Q  *  W  K  D  S  A  F  K  M  G  *  C  *  K  V  D  Y  *  P  S  V  K  L  W  C  L  E  D  S  K  R  T  N  L  Q  G  P  Q  V  *  K  W  T  S  W  A  T  W  P  N  V  F  T  E  L  F  A  L  Y  A  S  P  *  K  W  R  Y  K  *  L  H  C  K  F  T  I  Y  N  W  C  T  G  A  *  W  G  I  H  S  L  W  C  W  *  I  C  S  E  *  Y  G  S  S  N  Q  C  S  R  S  V  R  F  V  Q  *  I  F  S  T  K  L  S  R :   *  C  H  K  G  A  R  F  Y  F  L  C  S  F  E  E  R  H  G  N  T  N  E  L  *  *  Q  Y  T  Y  I  S  P  G  K  V  I  F  N  P  S  W  S  G  A  E  Q  A  A  F  H  *  S  R  D  *  R  R  A  G  *  Q  R  R  P  N  F  R  A  I  S  E  K  P  G  E  E  T  Q  E  T  I  T  R  H  K  F  A  Y  L  N  V  G  C  C  R  W  N  K  E  Y  D  K  :  V  A  K  R  G  S  Q  D  R  C  L  G  E  L  A  E  G  Q  S  R  S  R  N  P  K  A  *   : D  E  T  R  K  E  E  V  S  I  H  G  *  D  S  E  Q  A  *  T  R  S  G  E  G  P  K  Y  E  T  C  N  F  G  E  S  A  *  K  G  F  P  Q  N  H  S  I  S  G  V  F  Q  D  Y  I  I  *  Q  L  L  C  L  P  Y  P  L  I  L  C  T  G  M  R  L  S  E  V  K  F  K   </first_frame>
            <second_frame>  E  H  H  N  S  K  L  V  K  A  *  T  L  L  H  *  Q  *  L  K  :  G  Y  C  S  K  I  Y  V  A  C  N  L  P  L  L  R  I  M  K  Q  N  S  T  S  L  R  N  S  G  L  Y  T  S  P  A  T  P  E  Y  G  D  N  N  V  R  G  F  Q  K  G  W  S  S  E  R  V  P  L  P  T  N  S  G  R  R  H  I  S  T  T  A  L  M  P  F  N  S  G  R  T  V  P  S  K  W  D  D  A  E  R  W  I  T  S  P  V  S  S  Y  G  V  W  R  T  P  N  A  Q  T  Y  R  G  P  K  S  K  S  G  P  L  G  P  P  G  L  M  Y  L  P  N  Y  S  P  S  M  P  V  L  E  S  G  G  I  S  N  F  I  A  N  S  P  F  T  T  G  V  L  V  P  D  G  V  S  I  H  Y  G  A  G  E  Y  A  Q  N  S  M  A  R  A  T  S  A  P  G  L  S  D  L  F  S  E  S  S  V  P  S  S  P   : D  D  V  T  K  E  P  D  S  I  S  F  A  V  L  R  R  D  M  A  T  Q  M  S  S  D  D  S  T  H  T  S  P  Q  E  R  S  S  S  I  P  P  G  V  E  Q  S  R  Q  H  S  T  K  V  E  I  R  D  V  Q  V  D  K  G  D  P  I  L  G  L  S  R  K  S  R  V  R  K  P  K  K  Q  L  P  D  I  S  S  P  I  S  T  W  D  V  V  D  G  T  K  S  M  T  K :   S  Q  R  E  E  A  R  I  A  A  W  E  N  L  Q  K  A  K  A  E  A  E  I  Q  K  L  E  :  M  K  L  E  K  R  R  S  A  S  M  D  K  I  L  N  K  L  R  H  A  Q  V  K  A  Q  N  M  R  R  A  T  S  E  S  Q  P  R  R  D  S  H  R  I  I  P  F  R  E  Y  F  K  I  T  S  F  S  S  C  F  V  C  R  I  P  *  F  C  V  Q  A  *  G  F  L  K  *  N  S  S  </second_frame>
            <third_frame>   S  T  T  T  Q  S  W  *  K  P  E  L  F  C  I  S  S  S  *  R :   V  I  V  P  R  F  M  W  H  A  I  C  H  Y  *  E  S  *  S  R  I  L  L  P  *  G  I  R  V  Y  I  Q  A  Q  Q  H  Q  N  M  E  I  I  M  L  E  D  F  R  R  D  G  V  L  N  E  S  R  C  R  L  T  A  A  G  G  I  L  V  L  L  H  *  C  L  S  I  V  E  G  Q  C  L  Q  N  G  M  M  L  K  G  G  L  L  A  Q  C  Q  V  M  V  F  G  G  L  Q  T  H  K  P  T  G  A  P  S  L  K  V  D  L  L  G  H  L  A  *  C  I  Y  R  T  I  R  P  L  C  Q  S  L  K  V  E  V  *  V  T  S  L  Q  I  H  H  L  Q  L  V  Y  W  C  L  M  G  Y  P  F  I  M  V  L  V  N  M  L  R  I  V  W  L  E  Q  P  V  L  P  V  C  Q  I  C  S  V  N  L  Q  Y  Q  A  L  Q  :  M  M  S  Q  R  S  Q  I  L  F  P  L  Q  F  *  G  E  T  W  Q  H  K  *  A  L  M  T  V  H  I  H  L  P  R  K  G  H  L  Q  S  L  L  E  W  S  R  A  G  S  I  P  L  K  S  R  L  E  T  C  R  L  T  K  E  T  Q  F  *  G  Y  L  G  K  A  G  *  G  N  P  R  N  N  Y  Q  T  *  V  R  L  S  Q  R  G  M  L  *  M  E  Q  R  V  *  Q   : S  R  K  E  R  K  P  G  S  L  L  G  R  T  C  R  R  P  K  Q  K  Q  K  S  K  S  L  R :   *  N  *  K  R  G  G  Q  H  P  W  I  R  F  *  T  S  L  D  T  L  R  *  R  P  K  I  *  D  V  Q  L  R  R  V  S  L  E  G  I  P  T  E  S  F  H  F  G  S  I  S  R  L  H  H  L  A  V  A  L  F  A  V  S  L  D  F  V  Y  R  H  E  A  F  *  S  K  I  Q  V </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0012A12.1" strand="-"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="13149" stop="13144"/>
                    <exon start="12468" stop="11874"/>
                    <exon start="11171" stop="10862"/>
                    <exon start="10562" stop="10481"/>
                    <exon start="10392" stop="10195"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1188</number_coding_nucleotides>
                  <number_encoded_amino_acids>396</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LKGYCSKIYVACNLPLLRIMKQNSTSLRNSGLYTSPATPEYGDNNVRGFQKGWSSERVPLPTNSGRRHISTTALMPFNSGRTVPSKWDDAERWITSPVSSYGVWRTPNAQTYRGPKSKSGPLGPPGLMYLPNYSPSMPVLESGGISNFIANSPFTTGVLVPDGVSIHYGAGEYAQNSMARATSAPGLSDLFSESSVPSSPDDVTKEPDSISFAVLRRDMATQMSSDDSTHTSPQERSSSIPPGVEQSRQHSTKVEIRDVQVDKGDPILGLSRKSRVRKPKKQLPDISSPISTWDVVDGTKSMTKSQREEARIAAWENLQKAKAEAEIQKLEMKLEKRRSASMDKILNKLRHAQVKAQNMRRATSESQPRRDSHRIIPFREYFKITSFSSCFVCRIP*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="+" PGL_start="20729" PGL_stop="26219"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="20729" e_stop="21431"/>
            <exon e_start="21870" e_stop="22032"/>
            <exon e_start="22186" e_stop="22260"/>
            <exon e_start="22430" e_stop="22530"/>
            <exon e_start="22646" e_stop="22761"/>
            <exon e_start="23349" e_stop="23560"/>
            <exon e_start="23714" e_stop="23805"/>
            <exon e_start="24023" e_stop="24137"/>
            <exon e_start="24239" e_stop="24342"/>
            <exon e_start="24702" e_stop="24747"/>
            <exon e_start="24858" e_stop="24922"/>
            <exon e_start="25022" e_stop="25108"/>
            <exon e_start="25424" e_stop="25478"/>
            <exon e_start="25569" e_stop="25657"/>
            <exon e_start="25749" e_stop="25833"/>
            <exon e_start="25911" e_stop="26219"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.986" acc_prob="0.980" e_score="1.000"/>
          <exon-intron don_prob="0.980" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.978" e_score="1.000"/>
          <exon-intron don_prob="0.954" acc_prob="0.751" e_score="1.000"/>
          <exon-intron don_prob="0.731" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.985" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.895" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.085" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.972" acc_prob="0.983" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.914" acc_prob="0.683" e_score="1.000"/>
          <exon-intron don_prob="0.894" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.973" acc_prob="0.547" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.925" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="20729" e_stop="21431" e_length="703"/>
          </exon>
          <intron i_serial="1" don_prob="0.986" acc_prob="0.980">
            <gDNA_intron_boundary i_start="21432" i_stop="21869" i_length="438"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="21870" e_stop="22032" e_length="163"/>
          </exon>
          <intron i_serial="2" don_prob="0.980" acc_prob="0.999">
            <gDNA_intron_boundary i_start="22033" i_stop="22185" i_length="153"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="22186" e_stop="22260" e_length="75"/>
          </exon>
          <intron i_serial="3" don_prob="0.998" acc_prob="0.978">
            <gDNA_intron_boundary i_start="22261" i_stop="22429" i_length="169"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="22430" e_stop="22530" e_length="101"/>
          </exon>
          <intron i_serial="4" don_prob="0.954" acc_prob="0.751">
            <gDNA_intron_boundary i_start="22531" i_stop="22645" i_length="115"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="22646" e_stop="22761" e_length="116"/>
          </exon>
          <intron i_serial="5" don_prob="0.731" acc_prob="0.996">
            <gDNA_intron_boundary i_start="22762" i_stop="23348" i_length="587"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="23349" e_stop="23560" e_length="212"/>
          </exon>
          <intron i_serial="6" don_prob="1.000" acc_prob="0.996">
            <gDNA_intron_boundary i_start="23561" i_stop="23713" i_length="153"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="23714" e_stop="23805" e_length="92"/>
          </exon>
          <intron i_serial="7" don_prob="0.985" acc_prob="0.993">
            <gDNA_intron_boundary i_start="23806" i_stop="24022" i_length="217"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="24023" e_stop="24137" e_length="115"/>
          </exon>
          <intron i_serial="8" don_prob="0.895" acc_prob="0.996">
            <gDNA_intron_boundary i_start="24138" i_stop="24238" i_length="101"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="24239" e_stop="24342" e_length="104"/>
          </exon>
          <intron i_serial="9" don_prob="0.085" acc_prob="1.000">
            <gDNA_intron_boundary i_start="24343" i_stop="24701" i_length="359"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="24702" e_stop="24747" e_length="46"/>
          </exon>
          <intron i_serial="10" don_prob="0.972" acc_prob="0.983">
            <gDNA_intron_boundary i_start="24748" i_stop="24857" i_length="110"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="24858" e_stop="24922" e_length="65"/>
          </exon>
          <intron i_serial="11" don_prob="0.999" acc_prob="0.999">
            <gDNA_intron_boundary i_start="24923" i_stop="25021" i_length="99"/>
          </intron>
          <exon e_serial="12" e_score="1.000">
            <gDNA_exon_boundary e_start="25022" e_stop="25108" e_length="87"/>
          </exon>
          <intron i_serial="12" don_prob="0.914" acc_prob="0.683">
            <gDNA_intron_boundary i_start="25109" i_stop="25423" i_length="315"/>
          </intron>
          <exon e_serial="13" e_score="1.000">
            <gDNA_exon_boundary e_start="25424" e_stop="25478" e_length="55"/>
          </exon>
          <intron i_serial="13" don_prob="0.894" acc_prob="0.998">
            <gDNA_intron_boundary i_start="25479" i_stop="25568" i_length="90"/>
          </intron>
          <exon e_serial="14" e_score="1.000">
            <gDNA_exon_boundary e_start="25569" e_stop="25657" e_length="89"/>
          </exon>
          <intron i_serial="14" don_prob="0.973" acc_prob="0.547">
            <gDNA_intron_boundary i_start="25658" i_stop="25748" i_length="91"/>
          </intron>
          <exon e_serial="15" e_score="1.000">
            <gDNA_exon_boundary e_start="25749" e_stop="25833" e_length="85"/>
          </exon>
          <intron i_serial="15" don_prob="0.997" acc_prob="0.925">
            <gDNA_intron_boundary i_start="25834" i_stop="25910" i_length="77"/>
          </intron>
          <exon e_serial="16" e_score="1.000">
            <gDNA_exon_boundary e_start="25911" e_stop="26219" e_length="309"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20729" stop="21431"/>
              <exon start="21870" stop="22032"/>
              <exon start="22186" stop="22260"/>
              <exon start="22430" stop="22530"/>
              <exon start="22646" stop="22761"/>
              <exon start="23349" stop="23560"/>
              <exon start="23714" stop="23805"/>
              <exon start="24023" stop="24137"/>
              <exon start="24239" stop="24342"/>
              <exon start="24702" stop="24747"/>
              <exon start="24858" stop="24922"/>
              <exon start="25022" stop="25108"/>
              <exon start="25424" stop="25478"/>
              <exon start="25569" stop="25657"/>
              <exon start="25749" stop="25833"/>
              <exon start="25911" stop="26219"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U569421" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATATATTACTTGTTTGGATATCAATCTTCCTTGCCCCACCACCATCCTCACTTTAACCCACAAATCCCACTTTCTTTGGCCTAATTAACAATTTTTTCAATAAATCTTCTTTTCACTGAATCATACATACATTGGAAGAAAAACTCAAATCTTCTTTTCTTGAACTGGGGTTCAATTAAAAGATGTATTCAACTGTTTTTTACACTTCAGTGCATCCTTCCACTTCAGTTTTATCAAGAAAGCAGCTACCTTTATTGATTTCCAAGGACTTTTCTGCAGAGTTATATCATTCTTTACCTTGTAGGAGCTTGGAAAATGGGCATATCAACAAGGTTAAAGGAGTAAAAGTAAAAGCAACAATTGCTGAAGCTCCAGTTACTCCTACAGAGAAGACTGACTCTGGGGCTAACGGTGATTTGAAGGTTCCACAGAAGAAGTTGAAAGTACTTGTTGCGGGTGGTGGGATTGGTGGGTTAGTGTTTGCTTTGGCAGCAAAGAAAAGGGGGTTTGATGTATTGGTGTTTGAGAGGGATTTAAGTGCTATCAGAGGAGAGGGACAATATAGAGGTCCAATACAGATACAGAGCAATGCATTGGCTGCTTTAGAAGCAATTGATTTGGATGTTGCTGAAGACATTATGAATGCTGGCTGCATCACTGGTCAAAGGATTAATGGCTTGGTTGATGGTATTTCTGGCAACTG : GTATTGCAAGTTTGATACGTTCACTCCAGCAGTGGAACGTGGACTTCCAGTGACAAGAGTTATCAGTCGCATGACTTTGCAGCAGATCCTTGCACGTGCTGTTGGTGAGGAGATAATTATGAATGAAAGTAATGTTGTAGACTTTGAGGATGATGGAGAGAAG : GTTACTGTGGTTCTTGAGAATGGACAACGATTTACAGGTGATCTTCTGGTTGGTGCTGATGGCATAAGATCTAAG : GTACGGACTAATTTATTCGGACCCAGTGAAGCTACTTACTCTGGCTACACTTGTTATACTGGAATTGCAGATTTCGTTCCAGCTGATATTGATACAGTTGG : GTACCGCGTCTTTTTGGGCCACAAACAGTACTTTGTTTCTTCAGATGTGGGGGGAGGCAAGATGCAGTGGTATGCATTTTACAATGAACCAGCTGGTGGTGCGGATGCCCCAAACG : GTAAAAAGGAAAGATTGCTTAAAATATTTGGGGGATGGTGTGACAATGTTATAGACCTATTAGTTGCCACAGATGAAGATGCAATTCTTCGTCGTGACATCTATGATAGACCGCCAACCTTTAGTTGGGGAAGAGGTCGTGTTACATTGCTTGGGGACTCCGTCCATGCCATGCAGCCTAATTTGGGTCAAGGGGGATGCATGGCCATAGAG : GATAGCTATCAACTAGCACTGGAACTTGAAAAAGCATGCAGTCGAAGTGCAGAGTCTGGAAGCCCTGTGGATATCATCTCATCTTTAAGGAG : CTATGAAAGTGCTAGAAAACTTCGAGTTGGAGTCATCCATGGACTGGCTAGAATGGCTGCAATCATGGCATCTACTTACAAGGCTTATCTTGGCGTCGGACTTGGTCCACTATCA : TTTTTGACGCAGTATAGAATACCACATCCTGGAAGAGTTGGTGGAAGAGTTTTTATTGACTTGGGAATGCCTCTGATGTTAAGTTGGGTTCTAGGAGGCAATGG : GGACAAGCTTGAAGGCAGAATAAAACATTGCAGGCTATCTGAGAAA : GCAAATGACCAATTGAGAAAATGGTTTGAAGATGATGATGCTTTAGAGCGTGCTACTGATGCAGA : GTGGTTACTTTTACCTGCGGGGAATGGCTCTTCTGGTTTAGAAGCTATTGTTTTAAGCAGAGATGAGGATGTCCCTTGCACTGTCGG : GTCCATCTCACATACAAATATTCCTGGAAAATCAATAGTTTTACCTTTGCCACAG : GTATCTGAAATGCACGCCCGGATATCATGCAAAGACGGAGCATTTTTTGTAACTGATTTACGAAGTGAACATGGTACCTGGGTTACAGA : TAATGAAGGCAGAAGATATCGGACGTCTCCAAACTTCCCTACACGTTTTCATCCATCAGATGTTATCGAATTTGGTTCTGATAAG : GCAGCATTTCGTGTTAAAGCAATGAAATTTCCACTAAAAACTTCTGAAAGGAAGGAAGAGCGCGAAGCAGTGGAGGCAGCGTAAAGCTTGACCTGATATAAACAGGAAATTGTACAGCATTTTATAGCAAACATCAGGCGTTGAGCAATTTAAGCATAGTTAATTTTGTATACTGTAGGTTTTAGAAAAGATCCATAAACAAGACACCATGAAAGAAAATACAGAGATTCTCCTAAAGAAATCTGGAGAATGTCATGGACATTGTCTCTTATTCTACCATTGCTAAAAATATATTACTTCTCTATGTAT</gDNA_template>
            <first_frame> I  Y  Y  L  F  G  Y  Q  S  S  L  P  H  H  H  P  H  F  N  P  Q  I  P  L  S  L  A  *  L  T  I  F  S  I  N  L  L  F  T  E  S  Y  I  H  W  K  K  N  S  N  L  L  F  L  N  W  G  S  I  K  R  C  I  Q  L  F  F  T  L  Q  C  I  L  P  L  Q  F  Y  Q  E  S  S  Y  L  Y  *  F  P  R  T  F  L  Q  S  Y  I  I  L  Y  L  V  G  A  W  K  M  G  I  S  T  R  L  K  E  *  K  *  K  Q  Q  L  L  K  L  Q  L  L  L  Q  R  R  L  T  L  G  L  T  V  I  *  R  F  H  R  R  S  *  K  Y  L  L  R  V  V  G  L  V  G  *  C  L  L  W  Q  Q  R  K  G  G  L  M  Y  W  C  L  R  G  I  *  V  L  S  E  E  R  D  N  I  E  V  Q  Y  R  Y  R  A  M  H  W  L  L  *  K  Q  L  I  W  M  L  L  K  T  L  *  M  L  A  A  S  L  V  K  G  L  M  A  W  L  M  V  F  L  A  T   : G  I  A  S  L  I  R  S  L  Q  Q  W  N  V  D  F  Q  *  Q  E  L  S  V  A  *  L  C  S  R  S  L  H  V  L  L  V  R  R  *  L  *  M  K  V  M  L  *  T  L  R  M  M  E  R  R :   L  L  W  F  L  R  M  D  N  D  L  Q  V  I  F  W  L  V  L  M  A  *  D  L  R :   Y  G  L  I  Y  S  D  P  V  K  L  L  T  L  A  T  L  V  I  L  E  L  Q  I  S  F  Q  L  I  L  I  Q  L   : G  T  A  S  F  W  A  T  N  S  T  L  F  L  Q  M  W  G  E  A  R  C  S  G  M  H  F  T  M  N  Q  L  V  V  R  M  P  Q  T  :  V  K  R  K  D  C  L  K  Y  L  G  D  G  V  T  M  L  *  T  Y  *  L  P  Q  M  K  M  Q  F  F  V  V  T  S  M  I  D  R  Q  P  L  V  G  E  E  V  V  L  H  C  L  G  T  P  S  M  P  C  S  L  I  W  V  K  G  D  A  W  P  *  R :   I  A  I  N  *  H  W  N  L  K  K  H  A  V  E  V  Q  S  L  E  A  L  W  I  S  S  H  L  *  G   : A  M  K  V  L  E  N  F  E  L  E  S  S  M  D  W  L  E  W  L  Q  S  W  H  L  L  T  R  L  I  L  A  S  D  L  V  H  Y  H :   F  *  R  S  I  E  Y  H  I  L  E  E  L  V  E  E  F  L  L  T  W  E  C  L  *  C  *  V  G  F  *  E  A  M   : G  T  S  L  K  A  E  *  N  I  A  G  Y  L  R  K :   Q  M  T  N  *  E  N  G  L  K  M  M  M  L  *  S  V  L  L  M  Q   : S  G  Y  F  Y  L  R  G  M  A  L  L  V  *  K  L  L  F  *  A  E  M  R  M  S  L  A  L  S   : G  P  S  H  I  Q  I  F  L  E  N  Q  *  F  Y  L  C  H  R :   Y  L  K  C  T  P  G  Y  H  A  K  T  E  H  F  L  *  L  I  Y  E  V  N  M  V  P  G  L  Q   : I  M  K  A  E  D  I  G  R  L  Q  T  S  L  H  V  F  I  H  Q  M  L  S  N  L  V  L  I  R :   Q  H  F  V  L  K  Q  *  N  F  H  *  K  L  L  K  G  R  K  S  A  K  Q  W  R  Q  R  K  A  *  P  D  I  N  R  K  L  Y  S  I  L  *  Q  T  S  G  V  E  Q  F  K  H  S  *  F  C  I  L  *  V  L  E  K  I  H  K  Q  D  T  M  K  E  N  T  E  I  L  L  K  K  S  G  E  C  H  G  H  C  L  L  F  Y  H  C  *  K  Y  I  T  S  L  C   </first_frame>
            <second_frame>  Y  I  T  C  L  D  I  N  L  P  C  P  T  T  I  L  T  L  T  H  K  S  H  F  L  W  P  N  *  Q  F  F  Q  *  I  F  F  S  L  N  H  T  Y  I  G  R  K  T  Q  I  F  F  S  *  T  G  V  Q  L  K  D  V  F  N  C  F  L  H  F  S  A  S  F  H  F  S  F  I  K  K  A  A  T  F  I  D  F  Q  G  L  F  C  R  V  I  S  F  F  T  L  *  E  L  G  K  W  A  Y  Q  Q  G  *  R  S  K  S  K  S  N  N  C  *  S  S  S  Y  S  Y  R  E  D  *  L  W  G  *  R  *  F  E  G  S  T  E  E  V  E  S  T  C  C  G  W  W  D  W  W  V  S  V  C  F  G  S  K  E  K  G  V  *  C  I  G  V  *  E  G  F  K  C  Y  Q  R  R  G  T  I  *  R  S  N  T  D  T  E  Q  C  I  G  C  F  R  S  N  *  F  G  C  C  *  R  H  Y  E  C  W  L  H  H  W  S  K  D  *  W  L  G  *  W  Y  F  W  Q  L  :  V  L  Q  V  *  Y  V  H  S  S  S  G  T  W  T  S  S  D  K  S  Y  Q  S  H  D  F  A  A  D  P  C  T  C  C  W  *  G  D  N  Y  E  *  K  *  C  C  R  L  *  G  *  W  R  E   : G  Y  C  G  S  *  E  W  T  T  I  Y  R  *  S  S  G  W  C  *  W  H  K  I  *   : G  T  D  *  F  I  R  T  Q  *  S  Y  L  L  W  L  H  L  L  Y  W  N  C  R  F  R  S  S  *  Y  *  Y  S  W  :  V  P  R  L  F  G  P  Q  T  V  L  C  F  F  R  C  G  G  R  Q  D  A  V  V  C  I  L  Q  *  T  S  W  W  C  G  C  P  K  R :   *  K  G  K  I  A  *  N  I  W  G  M  V  *  Q  C  Y  R  P  I  S  C  H  R  *  R  C  N  S  S  S  *  H  L  *  *  T  A  N  L  *  L  G  K  R  S  C  Y  I  A  W  G  L  R  P  C  H  A  A  *  F  G  S  R  G  M  H  G  H  R   : G  *  L  S  T  S  T  G  T  *  K  S  M  Q  S  K  C  R  V  W  K  P  C  G  Y  H  L  I  F  K  E  :  L  *  K  C  *  K  T  S  S  W  S  H  P  W  T  G  *  N  G  C  N  H  G  I  Y  L  Q  G  L  S  W  R  R  T  W  S  T  I   : I  F  D  A  V  *  N  T  T  S  W  K  S  W  W  K  S  F  Y  *  L  G  N  A  S  D  V  K  L  G  S  R  R  Q  W  :  G  Q  A  *  R  Q  N  K  T  L  Q  A  I  *  E   : S  K  *  P  I  E  K  M  V  *  R  *  *  C  F  R  A  C  Y  *  C  R  :  V  V  T  F  T  C  G  E  W  L  F  W  F  R  S  Y  C  F  K  Q  R  *  G  C  P  L  H  C  R  :  V  H  L  T  Y  K  Y  S  W  K  I  N  S  F  T  F  A  T   : G  I  *  N  A  R  P  D  I  M  Q  R  R  S  I  F  C  N  *  F  T  K  *  T  W  Y  L  G  Y  R  :  *  *  R  Q  K  I  S  D  V  S  K  L  P  Y  T  F  S  S  I  R  C  Y  R  I  W  F  *  *   : G  S  I  S  C  *  S  N  E  I  S  T  K  N  F  *  K  E  G  R  A  R  S  S  G  G  S  V  K  L  D  L  I  *  T  G  N  C  T  A  F  Y  S  K  H  Q  A  L  S  N  L  S  I  V  N  F  V  Y  C  R  F  *  K  R  S  I  N  K  T  P  *  K  K  I  Q  R  F  S  *  R  N  L  E  N  V  M  D  I  V  S  Y  S  T  I  A  K  N  I  L  L  L  Y  V  </second_frame>
            <third_frame>   I  L  L  V  W  I  S  I  F  L  A  P  P  P  S  S  L  *  P  T  N  P  T  F  F  G  L  I  N  N  F  F  N  K  S  S  F  H  *  I  I  H  T  L  E  E  K  L  K  S  S  F  L  E  L  G  F  N  *  K  M  Y  S  T  V  F  Y  T  S  V  H  P  S  T  S  V  L  S  R  K  Q  L  P  L  L  I  S  K  D  F  S  A  E  L  Y  H  S  L  P  C  R  S  L  E  N  G  H  I  N  K  V  K  G  V  K  V  K  A  T  I  A  E  A  P  V  T  P  T  E  K  T  D  S  G  A  N  G  D  L  K  V  P  Q  K  K  L  K  V  L  V  A  G  G  G  I  G  G  L  V  F  A  L  A  A  K  K  R  G  F  D  V  L  V  F  E  R  D  L  S  A  I  R  G  E  G  Q  Y  R  G  P  I  Q  I  Q  S  N  A  L  A  A  L  E  A  I  D  L  D  V  A  E  D  I  M  N  A  G  C  I  T  G  Q  R  I  N  G  L  V  D  G  I  S  G  N  W :   Y  C  K  F  D  T  F  T  P  A  V  E  R  G  L  P  V  T  R  V  I  S  R  M  T  L  Q  Q  I  L  A  R  A  V  G  E  E  I  I  M  N  E  S  N  V  V  D  F  E  D  D  G  E  K  :  V  T  V  V  L  E  N  G  Q  R  F  T  G  D  L  L  V  G  A  D  G  I  R  S  K  :  V  R  T  N  L  F  G  P  S  E  A  T  Y  S  G  Y  T  C  Y  T  G  I  A  D  F  V  P  A  D  I  D  T  V  G :   Y  R  V  F  L  G  H  K  Q  Y  F  V  S  S  D  V  G  G  G  K  M  Q  W  Y  A  F  Y  N  E  P  A  G  G  A  D  A  P  N   : G  K  K  E  R  L  L  K  I  F  G  G  W  C  D  N  V  I  D  L  L  V  A  T  D  E  D  A  I  L  R  R  D  I  Y  D  R  P  P  T  F  S  W  G  R  G  R  V  T  L  L  G  D  S  V  H  A  M  Q  P  N  L  G  Q  G  G  C  M  A  I  E  :  D  S  Y  Q  L  A  L  E  L  E  K  A  C  S  R  S  A  E  S  G  S  P  V  D  I  I  S  S  L  R  S :   Y  E  S  A  R  K  L  R  V  G  V  I  H  G  L  A  R  M  A  A  I  M  A  S  T  Y  K  A  Y  L  G  V  G  L  G  P  L  S  :  F  L  T  Q  Y  R  I  P  H  P  G  R  V  G  G  R  V  F  I  D  L  G  M  P  L  M  L  S  W  V  L  G  G  N  G :   D  K  L  E  G  R  I  K  H  C  R  L  S  E  K  :  A  N  D  Q  L  R  K  W  F  E  D  D  D  A  L  E  R  A  T  D  A  E :   W  L  L  L  P  A  G  N  G  S  S  G  L  E  A  I  V  L  S  R  D  E  D  V  P  C  T  V  G :   S  I  S  H  T  N  I  P  G  K  S  I  V  L  P  L  P  Q  :  V  S  E  M  H  A  R  I  S  C  K  D  G  A  F  F  V  T  D  L  R  S  E  H  G  T  W  V  T  D :   N  E  G  R  R  Y  R  T  S  P  N  F  P  T  R  F  H  P  S  D  V  I  E  F  G  S  D  K  :  A  A  F  R  V  K  A  M  K  F  P  L  K  T  S  E  R  K  E  E  R  E  A  V  E  A  A  *  S  L  T  *  Y  K  Q  E  I  V  Q  H  F  I  A  N  I  R  R  *  A  I  *  A  *  L  I  L  Y  T  V  G  F  R  K  D  P  *  T  R  H  H  E  R  K  Y  R  D  S  P  K  E  I  W  R  M  S  W  T  L  S  L  I  L  P  L  L  K  I  Y  Y  F  S  M  Y </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0012A12.1" strand="+"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="20908" stop="21431"/>
                    <exon start="21870" stop="22032"/>
                    <exon start="22186" stop="22260"/>
                    <exon start="22430" stop="22530"/>
                    <exon start="22646" stop="22761"/>
                    <exon start="23349" stop="23560"/>
                    <exon start="23714" stop="23805"/>
                    <exon start="24023" stop="24137"/>
                    <exon start="24239" stop="24342"/>
                    <exon start="24702" stop="24747"/>
                    <exon start="24858" stop="24922"/>
                    <exon start="25022" stop="25108"/>
                    <exon start="25424" stop="25478"/>
                    <exon start="25569" stop="25657"/>
                    <exon start="25749" stop="25833"/>
                    <exon start="25911" stop="25994"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>2010</number_coding_nucleotides>
                  <number_encoded_amino_acids>670</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KMYSTVFYTSVHPSTSVLSRKQLPLLISKDFSAELYHSLPCRSLENGHINKVKGVKVKATIAEAPVTPTEKTDSGANGDLKVPQKKLKVLVAGGGIGGLVFALAAKKRGFDVLVFERDLSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEDIMNAGCITGQRINGLVDGISGNWYCKFDTFTPAVERGLPVTRVISRMTLQQILARAVGEEIIMNESNVVDFEDDGEKVTVVLENGQRFTGDLLVGADGIRSKVRTNLFGPSEATYSGYTCYTGIADFVPADIDTVGYRVFLGHKQYFVSSDVGGGKMQWYAFYNEPAGGADAPNGKKERLLKIFGGWCDNVIDLLVATDEDAILRRDIYDRPPTFSWGRGRVTLLGDSVHAMQPNLGQGGCMAIEDSYQLALELEKACSRSAESGSPVDIISSLRSYESARKLRVGVIHGLARMAAIMASTYKAYLGVGLGPLSFLTQYRIPHPGRVGGRVFIDLGMPLMLSWVLGGNGDKLEGRIKHCRLSEKANDQLRKWFEDDDALERATDAEWLLLPAGNGSSGLEAIVLSRDEDVPCTVGSISHTNIPGKSIVLPLPQVSEMHARISCKDGAFFVTDLRSEHGTWVTDNEGRRYRTSPNFPTRFHPSDVIEFGSDKAAFRVKAMKFPLKTSERKEEREAVEAA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="-" PGL_start="38184" PGL_stop="36334"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="38184" e_stop="36334"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.978"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.978">
            <gDNA_exon_boundary e_start="38184" e_stop="36334" e_length="1851"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="38184" stop="36334"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U565922" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATACTTCTCCTTTTCCCCAAATTTACTTCTCCACCGTTCCCACACACTCGCTTTTGCTTCATTTCGCCGTTTCTGTTACCGTTAATCAACGTGATCGGATTTTTTACACTCTTTTCCGGCCGGATTGTTGAAGTTACAATGGTCGACGTAGACCGGAGGATGACCGGGTTGAATCCGGCTCACTTAGCCGGACTCCGCCGTCTCTCTGCAAGAGCCGCCGCTTCTTCTCCGTCGACTCCGATGCCTCCTCGGAATAGTCTCCTTTCGTTCTCCTTTCTTGCAGATAAAGTTATATCTCATCTAAAGAGCTCTGGTATTCAGGTTCAGGCCGGGTTGTCGGATGTGGAATTCGCTAGAGCTGAAGCAGAGTTTGGGTTTGCTTTTCCACCTGACTTAAAAGCTGTTCTCTCCGCCGGTTTACCCATCGGACCTGGTTTTCCTGACTGGCGCTCTACTGGTCCGGCTCGGTTCCAGCTTCGTGCTTCGATTGACTTACCCATCGCTGCAATTTCATTCCATATAGCTCGTAATGCTTTGTGGTCTAAGTCATGGGGTCCTAGGCCATGTGACCCAGAAAAGGCAATTAAAATAGCAAGAAATGCTCTCAAAAGAGCTCCACTTCTGATACCCATTTTCAACCATTGTTACATTCCTTGTAATCCTTGTTTAGCAGGTAACCCAATTTTCTACGTGGACGAAAATAGGATTTTCTGCTGCGGATTTGATCTATCCGACTTCTTTGATCGTGAATCATCTTTGTTCCAAAGTTCAGATCCTCAGATTCTTTCAAAACAGCGCTCTTTAAGTGAAAAATCCGCTGGTTCATCATCCACTTTCTCAAGGAGGAGTCTCGATACACTCTCCGGTGGTCGGACGCCGCGTTGGGTAGAGTTCTGGAGCGACGCTGCCGTAGATCGAAGGCGGAGGAACTCAAATTCGTCATCGTCATGTTCAACCTCACCGGAAAGGTACTTTGAAATGCCCAAGTCCAAAATGCCTAATTGGGTCGACGAGTACGTAGATAATATCGGGTCGGTTTTAAAAGAAGGCGGGTGGGCTGAATCGGATGTGAAGGAAATTGTACAAGTTACAGCTTCTGGATTCTTCGAAGGTGAAATGATATTGTTAGATAATCAAGCGGTTATGGATGCTCTTCTTGTGAAAGCGGATCGGTTCTCTGATTCGCTCCGTAAAGCCGGGTGGAGCTCCGAAGAAGTTTCTTACGCACTGGGTTTTGATTATCGACCGGAGAAGGAGAAGAAACCGGCTAAGAAGCTTTCACCGGAGTTAGCGGAAAGAATCGGGAAATTGGCTGAGTCGGTAACCCGTTCACGGTCATCCTCATAGAATTGGTTAACCGGCTACCGGCAAACATCGAGATTCCTTTTTTCATGTTCTTTTTTAGATTTTCGAAACCTCGGGTTTGGTATATGCCTCTTTTTTGGTACAATTGATATTCAGACGCAAAAAAGAAAAAAAAAAGAAGAGAAACAAATACGCGTTGATGTATTATTATTAAAAAAGTACAAAGAATTTGAAATATGGAAAAAATTAGAAGAAATTGTATTAAGTTCTCTGTTTTTCCGTATTGGAATATAAAAACTTGTTGGTAAAAATGTTAAATGTTAGACAGCTGCAAGTGTTCTGGTAAATAGAACTTTATAATAATAAAATGTAGTGGGTAAGGATTAAGGTGGCACAGGTTTCGAATAGGGGGAATGCACGTGTGTGCCTTTCTGAAGAAAAAGAGACGTTGCTTTAGGCCCCTTCCATTACGAAAACTTAGCATCGTAATTGCTCTATCTCAATTTATTTATCGTAATTTTTAAATTTTTATCGAAAAATATAATT</gDNA_template>
            <first_frame> I  L  L  L  F  P  K  F  T  S  P  P  F  P  H  T  R  F  C  F  I  S  P  F  L  L  P  L  I  N  V  I  G  F  F  T  L  F  S  G  R  I  V  E  V  T  M  V  D  V  D  R  R  M  T  G  L  N  P  A  H  L  A  G  L  R  R  L  S  A  R  A  A  A  S  S  P  S  T  P  M  P  P  R  N  S  L  L  S  F  S  F  L  A  D  K  V  I  S  H  L  K  S  S  G  I  Q  V  Q  A  G  L  S  D  V  E  F  A  R  A  E  A  E  F  G  F  A  F  P  P  D  L  K  A  V  L  S  A  G  L  P  I  G  P  G  F  P  D  W  R  S  T  G  P  A  R  F  Q  L  R  A  S  I  D  L  P  I  A  A  I  S  F  H  I  A  R  N  A  L  W  S  K  S  W  G  P  R  P  C  D  P  E  K  A  I  K  I  A  R  N  A  L  K  R  A  P  L  L  I  P  I  F  N  H  C  Y  I  P  C  N  P  C  L  A  G  N  P  I  F  Y  V  D  E  N  R  I  F  C  C  G  F  D  L  S  D  F  F  D  R  E  S  S  L  F  Q  S  S  D  P  Q  I  L  S  K  Q  R  S  L  S  E  K  S  A  G  S  S  S  T  F  S  R  R  S  L  D  T  L  S  G  G  R  T  P  R  W  V  E  F  W  S  D  A  A  V  D  R  R  R  R  N  S  N  S  S  S  S  C  S  T  S  P  E  R  Y  F  E  M  P  K  S  K  M  P  N  W  V  D  E  Y  V  D  N  I  G  S  V  L  K  E  G  G  W  A  E  S  D  V  K  E  I  V  Q  V  T  A  S  G  F  F  E  G  E  M  I  L  L  D  N  Q  A  V  M  D  A  L  L  V  K  A  D  R  F  S  D  S  L  R  K  A  G  W  S  S  E  E  V  S  Y  A  L  G  F  D  Y  R  P  E  K  E  K  K  P  A  K  K  L  S  P  E  L  A  E  R  I  G  K  L  A  E  S  V  T  R  S  R  S  S  S  *  N  W  L  T  G  Y  R  Q  T  S  R  F  L  F  S  C  S  F  L  D  F  R  N  L  G  F  G  I  C  L  F  F  G  T  I  D  I  Q  T  Q  K  R  K  K  K  E  E  K  Q  I  R  V  D  V  L  L  L  K  K  Y  K  E  F  E  I  W  K  K  L  E  E  I  V  L  S  S  L  F  F  R  I  G  I  *  K  L  V  G  K  N  V  K  C  *  T  A  A  S  V  L  V  N  R  T  L  *  *  *  N  V  V  G  K  D  *  G  G  T  G  F  E  *  G  E  C  T  C  V  P  F  *  R  K  R  D  V  A  L  G  P  F  H  Y  E  N  L  A  S  *  L  L  Y  L  N  L  F  I  V  I  F  K  F  L  S  K  N  I  I </first_frame>
            <second_frame>  Y  F  S  F  S  P  N  L  L  L  H  R  S  H  T  L  A  F  A  S  F  R  R  F  C  Y  R  *  S  T  *  S  D  F  L  H  S  F  P  A  G  L  L  K  L  Q  W  S  T  *  T  G  G  *  P  G  *  I  R  L  T  *  P  D  S  A  V  S  L  Q  E  P  P  L  L  L  R  R  L  R  C  L  L  G  I  V  S  F  R  S  P  F  L  Q  I  K  L  Y  L  I  *  R  A  L  V  F  R  F  R  P  G  C  R  M  W  N  S  L  E  L  K  Q  S  L  G  L  L  F  H  L  T  *  K  L  F  S  P  P  V  Y  P  S  D  L  V  F  L  T  G  A  L  L  V  R  L  G  S  S  F  V  L  R  L  T  Y  P  S  L  Q  F  H  S  I  *  L  V  M  L  C  G  L  S  H  G  V  L  G  H  V  T  Q  K  R  Q  L  K  *  Q  E  M  L  S  K  E  L  H  F  *  Y  P  F  S  T  I  V  T  F  L  V  I  L  V  *  Q  V  T  Q  F  S  T  W  T  K  I  G  F  S  A  A  D  L  I  Y  P  T  S  L  I  V  N  H  L  C  S  K  V  Q  I  L  R  F  F  Q  N  S  A  L  *  V  K  N  P  L  V  H  H  P  L  S  Q  G  G  V  S  I  H  S  P  V  V  G  R  R  V  G  *  S  S  G  A  T  L  P  *  I  E  G  G  G  T  Q  I  R  H  R  H  V  Q  P  H  R  K  G  T  L  K  C  P  S  P  K  C  L  I  G  S  T  S  T  *  I  I  S  G  R  F  *  K  K  A  G  G  L  N  R  M  *  R  K  L  Y  K  L  Q  L  L  D  S  S  K  V  K  *  Y  C  *  I  I  K  R  L  W  M  L  F  L  *  K  R  I  G  S  L  I  R  S  V  K  P  G  G  A  P  K  K  F  L  T  H  W  V  L  I  I  D  R  R  R  R  R  N  R  L  R  S  F  H  R  S  *  R  K  E  S  G  N  W  L  S  R  *  P  V  H  G  H  P  H  R  I  G  *  P  A  T  G  K  H  R  D  S  F  F  H  V  L  F  *  I  F  E  T  S  G  L  V  Y  A  S  F  L  V  Q  L  I  F  R  R  K  K  E  K  K  K  K  R  N  K  Y  A  L  M  Y  Y  Y  *  K  S  T  K  N  L  K  Y  G  K  N  *  K  K  L  Y  *  V  L  C  F  S  V  L  E  Y  K  N  L  L  V  K  M  L  N  V  R  Q  L  Q  V  F  W  *  I  E  L  Y  N  N  K  M  *  W  V  R  I  K  V  A  Q  V  S  N  R  G  N  A  R  V  C  L  S  E  E  K  E  T  L  L  *  A  P  S  I  T  K  T  *  H  R  N  C  S  I  S  I  Y  L  S  *  F  L  N  F  Y  R  K  I  *   </second_frame>
            <third_frame>   T  S  P  F  P  Q  I  Y  F  S  T  V  P  T  H  S  L  L  L  H  F  A  V  S  V  T  V  N  Q  R  D  R  I  F  Y  T  L  F  R  P  D  C  *  S  Y  N  G  R  R  R  P  E  D  D  R  V  E  S  G  S  L  S  R  T  P  P  S  L  C  K  S  R  R  F  F  S  V  D  S  D  A  S  S  E  *  S  P  F  V  L  L  S  C  R  *  S  Y  I  S  S  K  E  L  W  Y  S  G  S  G  R  V  V  G  C  G  I  R  *  S  *  S  R  V  W  V  C  F  S  T  *  L  K  S  C  S  L  R  R  F  T  H  R  T  W  F  S  *  L  A  L  Y  W  S  G  S  V  P  A  S  C  F  D  *  L  T  H  R  C  N  F  I  P  Y  S  S  *  C  F  V  V  *  V  M  G  S  *  A  M  *  P  R  K  G  N  *  N  S  K  K  C  S  Q  K  S  S  T  S  D  T  H  F  Q  P  L  L  H  S  L  *  S  L  F  S  R  *  P  N  F  L  R  G  R  K  *  D  F  L  L  R  I  *  S  I  R  L  L  *  S  *  I  I  F  V  P  K  F  R  S  S  D  S  F  K  T  A  L  F  K  *  K  I  R  W  F  I  I  H  F  L  K  E  E  S  R  Y  T  L  R  W  S  D  A  A  L  G  R  V  L  E  R  R  C  R  R  S  K  A  E  E  L  K  F  V  I  V  M  F  N  L  T  G  K  V  L  *  N  A  Q  V  Q  N  A  *  L  G  R  R  V  R  R  *  Y  R  V  G  F  K  R  R  R  V  G  *  I  G  C  E  G  N  C  T  S  Y  S  F  W  I  L  R  R  *  N  D  I  V  R  *  S  S  G  Y  G  C  S  S  C  E  S  G  S  V  L  *  F  A  P  *  S  R  V  E  L  R  R  S  F  L  R  T  G  F  *  L  S  T  G  E  G  E  E  T  G  *  E  A  F  T  G  V  S  G  K  N  R  E  I  G  *  V  G  N  P  F  T  V  I  L  I  E  L  V  N  R  L  P  A  N  I  E  I  P  F  F  M  F  F  F  R  F  S  K  P  R  V  W  Y  M  P  L  F  W  Y  N  *  Y  S  D  A  K  K  K  K  K  R  R  E  T  N  T  R  *  C  I  I  I  K  K  V  Q  R  I  *  N  M  E  K  I  R  R  N  C  I  K  F  S  V  F  P  Y  W  N  I  K  T  C  W  *  K  C  *  M  L  D  S  C  K  C  S  G  K  *  N  F  I  I  I  K  C  S  G  *  G  L  R  W  H  R  F  R  I  G  G  M  H  V  C  A  F  L  K  K  K  R  R  C  F  R  P  L  P  L  R  K  L  S  I  V  I  A  L  S  Q  F  I  Y  R  N  F  *  I  F  I  E  K  Y  N  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0012A12.1" strand="-"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="38184" stop="36838"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1344</number_coding_nucleotides>
                  <number_encoded_amino_acids>448</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ILLLFPKFTSPPFPHTRFCFISPFLLPLINVIGFFTLFSGRIVEVTMVDVDRRMTGLNPAHLAGLRRLSARAAASSPSTPMPPRNSLLSFSFLADKVISHLKSSGIQVQAGLSDVEFARAEAEFGFAFPPDLKAVLSAGLPIGPGFPDWRSTGPARFQLRASIDLPIAAISFHIARNALWSKSWGPRPCDPEKAIKIARNALKRAPLLIPIFNHCYIPCNPCLAGNPIFYVDENRIFCCGFDLSDFFDRESSLFQSSDPQILSKQRSLSEKSAGSSSTFSRRSLDTLSGGRTPRWVEFWSDAAVDRRRRNSNSSSSCSTSPERYFEMPKSKMPNWVDEYVDNIGSVLKEGGWAESDVKEIVQVTASGFFEGEMILLDNQAVMDALLVKADRFSDSLRKAGWSSEEVSYALGFDYRPEKEKKPAKKLSPELAERIGKLAESVTRSRSSS*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0012A12.1" strand="-"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="36837" stop="36586"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>249</number_coding_nucleotides>
                  <number_encoded_amino_acids>83</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NWLTGYRQTSRFLFSCSFLDFRNLGFGICLFFGTIDIQTQKRKKKEEKQIRVDVLLLKKYKEFEIWKKLEEIVLSSLFFRIGI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="+" PGL_start="36575" PGL_stop="37312"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="36575" e_stop="37312"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.999"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.999">
            <gDNA_exon_boundary e_start="36575" e_stop="37312" e_length="738"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36575" stop="37312"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U565923" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CCAACAAGTTTTTATATTCCAATACGGAAAAACAGAGAACTTAATACAATTTCTTCTAATTTTTTCCATATTTCAAATTCTTTGTACTTTTTTAATAATAATACATCAACGCGTATTTGTTTCTCTTCTTTTTTTTTTCTTTTTTGCGTCTGAATATCAATTGTACCAAAAAAGAGGCATATACCAAACCCGAGGTTTCGAAAATCTAAAAAAGAACATGAAAAAAGGAATCTCGATGTTTGCCGGTAGCCGGTTAACCAATTCTATGAGGATGACCGTGAACGGGTTACCGACTCAGCCAATTTCCCGATTCTTTCCGCTAACTCCGGTGAAAGCTTCTTAGCCGGTTTCTTCTCCTTCTCCGGTCGATAATCAAAACCCAGTGCGTAAGAAACTTCTTCGGAGCTCCACCCGGCTTTACGGAGCGAATCAGAGAACCGATCCGCTTTCACAAGAAGAGCATCCATAACCGCTTGATTATCTAACAATATCATTTCACCTTCGAAGAATCCAGAAGCTGTAACTTGTACAATTTCCTTCACATCCGATTCAGCCCACCCGCCTTCTTTTAAAACCGACCCGATATTATCTACGTACTCGTCGACCCAATTAGGCATTTTGGACTTGGGCATTTCAAAGTACCTTTCCGGTGAGGTTGAACATGACGATGACGAATTTGAGTTCCTCCGCCTTCGATCTACGGCAGCGTCGCTCCAGAACTCTACCCAACGCGGCGTC</gDNA_template>
            <first_frame> P  T  S  F  Y  I  P  I  R  K  N  R  E  L  N  T  I  S  S  N  F  F  H  I  S  N  S  L  Y  F  F  N  N  N  T  S  T  R  I  C  F  S  S  F  F  F  L  F  C  V  *  I  S  I  V  P  K  K  R  H  I  P  N  P  R  F  R  K  S  K  K  E  H  E  K  R  N  L  D  V  C  R  *  P  V  N  Q  F  Y  E  D  D  R  E  R  V  T  D  S  A  N  F  P  I  L  S  A  N  S  G  E  S  F  L  A  G  F  F  S  F  S  G  R  *  S  K  P  S  A  *  E  T  S  S  E  L  H  P  A  L  R  S  E  S  E  N  R  S  A  F  T  R  R  A  S  I  T  A  *  L  S  N  N  I  I  S  P  S  K  N  P  E  A  V  T  C  T  I  S  F  T  S  D  S  A  H  P  P  S  F  K  T  D  P  I  L  S  T  Y  S  S  T  Q  L  G  I  L  D  L  G  I  S  K  Y  L  S  G  E  V  E  H  D  D  D  E  F  E  F  L  R  L  R  S  T  A  A  S  L  Q  N  S  T  Q  R  G  V </first_frame>
            <second_frame>  Q  Q  V  F  I  F  Q  Y  G  K  T  E  N  L  I  Q  F  L  L  I  F  S  I  F  Q  I  L  C  T  F  L  I  I  I  H  Q  R  V  F  V  S  L  L  F  F  F  F  F  A  S  E  Y  Q  L  Y  Q  K  R  G  I  Y  Q  T  R  G  F  E  N  L  K  K  N  M  K  K  G  I  S  M  F  A  G  S  R  L  T  N  S  M  R  M  T  V  N  G  L  P  T  Q  P  I  S  R  F  F  P  L  T  P  V  K  A  S  *  P  V  S  S  P  S  P  V  D  N  Q  N  P  V  R  K  K  L  L  R  S  S  T  R  L  Y  G  A  N  Q  R  T  D  P  L  S  Q  E  E  H  P  *  P  L  D  Y  L  T  I  S  F  H  L  R  R  I  Q  K  L  *  L  V  Q  F  P  S  H  P  I  Q  P  T  R  L  L  L  K  P  T  R  Y  Y  L  R  T  R  R  P  N  *  A  F  W  T  W  A  F  Q  S  T  F  P  V  R  L  N  M  T  M  T  N  L  S  S  S  A  F  D  L  R  Q  R  R  S  R  T  L  P  N  A  A   </second_frame>
            <third_frame>   N  K  F  L  Y  S  N  T  E  K  Q  R  T  *  Y  N  F  F  *  F  F  P  Y  F  K  F  F  V  L  F  *  *  *  Y  I  N  A  Y  L  F  L  F  F  F  F  S  F  L  R  L  N  I  N  C  T  K  K  E  A  Y  T  K  P  E  V  S  K  I  *  K  R  T  *  K  K  E  S  R  C  L  P  V  A  G  *  P  I  L  *  G  *  P  *  T  G  Y  R  L  S  Q  F  P  D  S  F  R  *  L  R  *  K  L  L  S  R  F  L  L  L  L  R  S  I  I  K  T  Q  C  V  R  N  F  F  G  A  P  P  G  F  T  E  R  I  R  E  P  I  R  F  H  K  K  S  I  H  N  R  L  I  I  *  Q  Y  H  F  T  F  E  E  S  R  S  C  N  L  Y  N  F  L  H  I  R  F  S  P  P  A  F  F  *  N  R  P  D  I  I  Y  V  L  V  D  P  I  R  H  F  G  L  G  H  F  K  V  P  F  R  *  G  *  T  *  R  *  R  I  *  V  P  P  P  S  I  Y  G  S  V  A  P  E  L  Y  P  T  R  R  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0012A12.1" strand="+"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="36576" stop="36917"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>339</number_coding_nucleotides>
                  <number_encoded_amino_acids>113</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QQVFIFQYGKTENLIQFLLIFSIFQILCTFLIIIHQRVFVSLLFFFFFASEYQLYQKRGIYQTRGFENLKKNMKKGISMFAGSRLTNSMRMTVNGLPTQPISRFFPLTPVKAS*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0012A12.1" strand="+"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="37052" stop="37312"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>261</number_coding_nucleotides>
                  <number_encoded_amino_acids>87</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LSNNIISPSKNPEAVTCTISFTSDSAHPPSFKTDPILSTYSSTQLGILDLGISKYLSGEVEHDDDEFEFLRLRSTAASLQNSTQRGV</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="+" PGL_start="56036" PGL_stop="66942"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="56036" e_stop="56290"/>
            <exon e_start="59847" e_stop="59969"/>
            <exon e_start="60107" e_stop="60199"/>
            <exon e_start="61227" e_stop="61283"/>
            <exon e_start="61452" e_stop="61507"/>
            <exon e_start="61633" e_stop="61725"/>
            <exon e_start="62444" e_stop="62534"/>
            <exon e_start="62657" e_stop="62694"/>
            <exon e_start="62847" e_stop="62885"/>
            <exon e_start="63506" e_stop="63582"/>
            <exon e_start="63651" e_stop="63735"/>
            <exon e_start="63815" e_stop="63911"/>
            <exon e_start="64000" e_stop="64096"/>
            <exon e_start="64969" e_stop="65040"/>
            <exon e_start="65226" e_stop="65292"/>
            <exon e_start="65371" e_stop="65496"/>
            <exon e_start="66307" e_stop="66361"/>
            <exon e_start="66446" e_stop="66583"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.850" acc_prob="0.967" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.960" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.973" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.988" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.984" e_score="0.976"/>
          <exon-intron don_prob="0.869" acc_prob="0.998" e_score="0.974"/>
          <exon-intron don_prob="0.999" acc_prob="0.999" e_score="0.974"/>
          <exon-intron don_prob="1.000" acc_prob="0.868" e_score="0.987"/>
          <exon-intron don_prob="0.945" acc_prob="0.964" e_score="0.976"/>
          <exon-intron don_prob="0.931" acc_prob="0.977" e_score="0.979"/>
          <exon-intron don_prob="0.945" acc_prob="0.988" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.887" acc_prob="0.977" e_score="0.985"/>
          <exon-intron don_prob="0.999" acc_prob="0.991" e_score="0.984"/>
          <exon-intron don_prob="0.883" acc_prob="1.000" e_score="0.964"/>
          <exon-only e_score="0.804"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="56036" e_stop="56290" e_length="255"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="1.000">
            <gDNA_intron_boundary i_start="56291" i_stop="59846" i_length="3556"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="59847" e_stop="59969" e_length="123"/>
          </exon>
          <intron i_serial="2" don_prob="0.850" acc_prob="0.967">
            <gDNA_intron_boundary i_start="59970" i_stop="60106" i_length="137"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="60107" e_stop="60199" e_length="93"/>
          </exon>
          <intron i_serial="3" don_prob="0.997" acc_prob="0.993">
            <gDNA_intron_boundary i_start="60200" i_stop="61226" i_length="1027"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="61227" e_stop="61283" e_length="57"/>
          </exon>
          <intron i_serial="4" don_prob="0.960" acc_prob="0.999">
            <gDNA_intron_boundary i_start="61284" i_stop="61451" i_length="168"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="61452" e_stop="61507" e_length="56"/>
          </exon>
          <intron i_serial="5" don_prob="0.973" acc_prob="0.991">
            <gDNA_intron_boundary i_start="61508" i_stop="61632" i_length="125"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="61633" e_stop="61725" e_length="93"/>
          </exon>
          <intron i_serial="6" don_prob="0.988" acc_prob="0.993">
            <gDNA_intron_boundary i_start="61726" i_stop="62443" i_length="718"/>
          </intron>
          <exon e_serial="7" e_score="0.976">
            <gDNA_exon_boundary e_start="62444" e_stop="62534" e_length="91"/>
          </exon>
          <intron i_serial="7" don_prob="0.999" acc_prob="0.984">
            <gDNA_intron_boundary i_start="62535" i_stop="62656" i_length="122"/>
          </intron>
          <exon e_serial="8" e_score="0.974">
            <gDNA_exon_boundary e_start="62657" e_stop="62694" e_length="38"/>
          </exon>
          <intron i_serial="8" don_prob="0.869" acc_prob="0.998">
            <gDNA_intron_boundary i_start="62695" i_stop="62846" i_length="152"/>
          </intron>
          <exon e_serial="9" e_score="0.974">
            <gDNA_exon_boundary e_start="62847" e_stop="62885" e_length="39"/>
          </exon>
          <intron i_serial="9" don_prob="0.999" acc_prob="0.999">
            <gDNA_intron_boundary i_start="62886" i_stop="63505" i_length="620"/>
          </intron>
          <exon e_serial="10" e_score="0.987">
            <gDNA_exon_boundary e_start="63506" e_stop="63582" e_length="77"/>
          </exon>
          <intron i_serial="10" don_prob="1.000" acc_prob="0.868">
            <gDNA_intron_boundary i_start="63583" i_stop="63650" i_length="68"/>
          </intron>
          <exon e_serial="11" e_score="0.976">
            <gDNA_exon_boundary e_start="63651" e_stop="63735" e_length="85"/>
          </exon>
          <intron i_serial="11" don_prob="0.945" acc_prob="0.964">
            <gDNA_intron_boundary i_start="63736" i_stop="63814" i_length="79"/>
          </intron>
          <exon e_serial="12" e_score="0.979">
            <gDNA_exon_boundary e_start="63815" e_stop="63911" e_length="97"/>
          </exon>
          <intron i_serial="12" don_prob="0.931" acc_prob="0.977">
            <gDNA_intron_boundary i_start="63912" i_stop="63999" i_length="88"/>
          </intron>
          <exon e_serial="13" e_score="1.000">
            <gDNA_exon_boundary e_start="64000" e_stop="64096" e_length="97"/>
          </exon>
          <intron i_serial="13" don_prob="0.945" acc_prob="0.988">
            <gDNA_intron_boundary i_start="64097" i_stop="64968" i_length="872"/>
          </intron>
          <exon e_serial="14" e_score="1.000">
            <gDNA_exon_boundary e_start="64969" e_stop="65040" e_length="72"/>
          </exon>
          <intron i_serial="14" don_prob="0.994" acc_prob="0.991">
            <gDNA_intron_boundary i_start="65041" i_stop="65225" i_length="185"/>
          </intron>
          <exon e_serial="15" e_score="0.985">
            <gDNA_exon_boundary e_start="65226" e_stop="65292" e_length="67"/>
          </exon>
          <intron i_serial="15" don_prob="0.887" acc_prob="0.977">
            <gDNA_intron_boundary i_start="65293" i_stop="65370" i_length="78"/>
          </intron>
          <exon e_serial="16" e_score="0.984">
            <gDNA_exon_boundary e_start="65371" e_stop="65496" e_length="126"/>
          </exon>
          <intron i_serial="16" don_prob="0.999" acc_prob="0.991">
            <gDNA_intron_boundary i_start="65497" i_stop="66306" i_length="810"/>
          </intron>
          <exon e_serial="17" e_score="0.964">
            <gDNA_exon_boundary e_start="66307" e_stop="66361" e_length="55"/>
          </exon>
          <intron i_serial="17" don_prob="0.883" acc_prob="1.000">
            <gDNA_intron_boundary i_start="66362" i_stop="66445" i_length="84"/>
          </intron>
          <exon e_serial="18" e_score="0.804">
            <gDNA_exon_boundary e_start="66446" e_stop="66583" e_length="138"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="56036" stop="56290"/>
              <exon start="59847" stop="59969"/>
              <exon start="60107" stop="60199"/>
              <exon start="61227" stop="61283"/>
              <exon start="61452" stop="61507"/>
              <exon start="61633" stop="61725"/>
              <exon start="62444" stop="62525"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U571625" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="56132" stop="56290"/>
              <exon start="59847" stop="59969"/>
              <exon start="60107" stop="60199"/>
              <exon start="61227" stop="61283"/>
              <exon start="61452" stop="61507"/>
              <exon start="61633" stop="61725"/>
              <exon start="62444" stop="62534"/>
              <exon start="62657" stop="62694"/>
              <exon start="62847" stop="62885"/>
              <exon start="63506" stop="63582"/>
              <exon start="63651" stop="63735"/>
              <exon start="63815" stop="63911"/>
              <exon start="64000" stop="64096"/>
              <exon start="64969" stop="65040"/>
              <exon start="65226" stop="65292"/>
              <exon start="65371" stop="65496"/>
              <exon start="66307" stop="66361"/>
              <exon start="66446" stop="66583"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U571624" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GGAAGTCGTTAAAGTAAAATCGCCGTTAATTTGTTTCTCCCTAACAGATAGCGCCGTTCATTTGTTTCTCCCTAGCAGAACCCTAGAGAGAGTGAGAGTATGGCGGACGAAGCTGAAGACGCTATATTGGCATATCTCAAAGACAACGATGAGATTTCAAATTCTGCAAAATTTGCTCAAGATTTTGGTTTTGGCCATGACGAGATCCTCAATGTCATACGCAGACTCCATGGATTTCGATTCGTGGATGCTCAG : GACATTAGGAGAGAGAGATGGGTGCTTACTGAAGAGGGGAAAACTTATGCTGCTGTAGGTTCTCCTGAATTTCAGCTTTTCTCAGCAGTACCACCGGAGGGAATTGCGCGGGAAGAGTTGCAG : AAAAAATTGGATCCTGCAGTTTATAAAATTGGTTGCCAGCAAGCTATAAAGAACAAGTGGGTGGAGATGGCAAAGACACATGTCTCAAGGAAG : GTCCAACATGCTGATGACAAAGTTAAAAATTTGCTGTTGCGGATACAAAATGACGAG : GCTGTCAATCAGGAGGATATTGATGCTCTAAAGCGAAGAAAACTAATAATTCAGCA : GGTTTGGAAAGGAAATTCCGTAAGAAAAGGTCCCGAATATGCCCCAAAAAGGAAAAGAGCAGCGACTGATCTCACTCGAGAAAATTTACAGAG : GGGTGACTGGAAGGAATTGGAATTTAAAGAGTACAACTTCAGTGCTAAAGGTCAGCCAGTTGAAGGTGGCCATCTTCATCCATTGCTCAAG : GTTAGGCGGCAGGTACAAACAATTTTTCTTAATATGGG : GTTTGAGGAGATGCCAACGAATAATTATGTCGAAAGCAG : TTTTTGGAATTTCGATGCACTTTTCCAGCCCCAACAGCACCCTGCCCGTGATTCACATGATACTTTCTTTTTGAAAG : TACCTTCCTCTACAAAGATGCTTCCAGAAGATTATGTTGAGCGGGTAAAAGAAATTCATGAATCTGGTGGTTACCAATCTAGGGG : ATATGGGTATGATTGGAAAAGAGAGGAAGCGAACAAGAATCTTTTGCGGACACACACTACTGCTGTTTCGTCAAGAATGTTGTATGCATTAGCGAAG : AAGCCATTCGCCCCCAAGAAATACTATTCTATTGATCGTGTTTTCAGAAATGAAGCAGTTGATCGAACACATCTTGCTGAATTTCATCAGATAGAAG : GTTTAATATGTGATCGTGGACTCACTCTTGGTGACCTGATTGGTGTTCTTCATGACTTCTTTTCTCGTCTAG : GAATGTCCAAGCTTCGGTTCAAACCTGCTTATAACCCTTATACTGAGCCCAGCATGGAAATTTTCAG : CTACCATGAAGGCTTTAAGAAATGGGTAGAAGTTGGAAATTCTGGTATGTTTAGGCCTGAAATGCTTCTTCCTATGGGTCTGCCAGAAGATGTTCGGGTTATTGCCTGGGGCCTTTCCCTTGAGAG : GCCCACCATGATTCTCTACGGAATTGACAACATCAGAGATCTTTTTGGTCCCAAG : GTGGATCTAGGTCTCATCAAAAGAAACCCAATATGCCGGCTTGGACTTTAGTAATACAGCATTTTTGACTCTGCTGGGCAATAAAGTTGAGATGAAATTTTTCTGCTGGGAAGTCTAAGTTGAGATCATTTATTTACA</gDNA_template>
            <first_frame> G  S  R  *  S  K  I  A  V  N  L  F  L  P  N  R  *  R  R  S  F  V  S  P  *  Q  N  P  R  E  S  E  S  M  A  D  E  A  E  D  A  I  L  A  Y  L  K  D  N  D  E  I  S  N  S  A  K  F  A  Q  D  F  G  F  G  H  D  E  I  L  N  V  I  R  R  L  H  G  F  R  F  V  D  A  Q  :  D  I  R  R  E  R  W  V  L  T  E  E  G  K  T  Y  A  A  V  G  S  P  E  F  Q  L  F  S  A  V  P  P  E  G  I  A  R  E  E  L  Q  :  K  K  L  D  P  A  V  Y  K  I  G  C  Q  Q  A  I  K  N  K  W  V  E  M  A  K  T  H  V  S  R  K  :  V  Q  H  A  D  D  K  V  K  N  L  L  L  R  I  Q  N  D  E  :  A  V  N  Q  E  D  I  D  A  L  K  R  R  K  L  I  I  Q  Q :   V  W  K  G  N  S  V  R  K  G  P  E  Y  A  P  K  R  K  R  A  A  T  D  L  T  R  E  N  L  Q  R :   G  D  W  K  E  L  E  F  K  E  Y  N  F  S  A  K  G  Q  P  V  E  G  G  H  L  H  P  L  L  K  :  V  R  R  Q  V  Q  T  I  F  L  N  M  G :   F  E  E  M  P  T  N  N  Y  V  E  S  S :   F  W  N  F  D  A  L  F  Q  P  Q  Q  H  P  A  R  D  S  H  D  T  F  F  L  K   : V  P  S  S  T  K  M  L  P  E  D  Y  V  E  R  V  K  E  I  H  E  S  G  G  Y  Q  S  R  G :   Y  G  Y  D  W  K  R  E  E  A  N  K  N  L  L  R  T  H  T  T  A  V  S  S  R  M  L  Y  A  L  A  K  :  K  P  F  A  P  K  K  Y  Y  S  I  D  R  V  F  R  N  E  A  V  D  R  T  H  L  A  E  F  H  Q  I  E   : G  L  I  C  D  R  G  L  T  L  G  D  L  I  G  V  L  H  D  F  F  S  R  L   : G  M  S  K  L  R  F  K  P  A  Y  N  P  Y  T  E  P  S  M  E  I  F  S :   Y  H  E  G  F  K  K  W  V  E  V  G  N  S  G  M  F  R  P  E  M  L  L  P  M  G  L  P  E  D  V  R  V  I  A  W  G  L  S  L  E  R :   P  T  M  I  L  Y  G  I  D  N  I  R  D  L  F  G  P  K  :  V  D  L  G  L  I  K  R  N  P  I  C  R  L  G  L  *  *  Y  S  I  F  D  S  A  G  Q  *  S  *  D  E  I  F  L  L  G  S  L  S  *  D  H  L  F  T </first_frame>
            <second_frame>  E  V  V  K  V  K  S  P  L  I  C  F  S  L  T  D  S  A  V  H  L  F  L  P  S  R  T  L  E  R  V  R  V  W  R  T  K  L  K  T  L  Y  W  H  I  S  K  T  T  M  R  F  Q  I  L  Q  N  L  L  K  I  L  V  L  A  M  T  R  S  S  M  S  Y  A  D  S  M  D  F  D  S  W  M  L  R :   T  L  G  E  R  D  G  C  L  L  K  R  G  K  L  M  L  L  *  V  L  L  N  F  S  F  S  Q  Q  Y  H  R  R  E  L  R  G  K  S  C  R :   K  N  W  I  L  Q  F  I  K  L  V  A  S  K  L  *  R  T  S  G  W  R  W  Q  R  H  M  S  Q  G  R :   S  N  M  L  M  T  K  L  K  I  C  C  C  G  Y  K  M  T  R :   L  S  I  R  R  I  L  M  L  *  S  E  E  N  *  *  F  S   : R  F  G  K  E  I  P  *  E  K  V  P  N  M  P  Q  K  G  K  E  Q  R  L  I  S  L  E  K  I  Y  R   : G  V  T  G  R  N  W  N  L  K  S  T  T  S  V  L  K  V  S  Q  L  K  V  A  I  F  I  H  C  S  R :   L  G  G  R  Y  K  Q  F  F  L  I  W   : G  L  R  R  C  Q  R  I  I  M  S  K  A   : V  F  G  I  S  M  H  F  S  S  P  N  S  T  L  P  V  I  H  M  I  L  S  F  *  K  :  Y  L  P  L  Q  R  C  F  Q  K  I  M  L  S  G  *  K  K  F  M  N  L  V  V  T  N  L  G   : D  M  G  M  I  G  K  E  R  K  R  T  R  I  F  C  G  H  T  L  L  L  F  R  Q  E  C  C  M  H  *  R  R :   S  H  S  P  P  R  N  T  I  L  L  I  V  F  S  E  M  K  Q  L  I  E  H  I  L  L  N  F  I  R  *  K  :  V  *  Y  V  I  V  D  S  L  L  V  T  *  L  V  F  F  M  T  S  F  L  V  *  :  E  C  P  S  F  G  S  N  L  L  I  T  L  I  L  S  P  A  W  K  F  S   : A  T  M  K  A  L  R  N  G  *  K  L  E  I  L  V  C  L  G  L  K  C  F  F  L  W  V  C  Q  K  M  F  G  L  L  P  G  A  F  P  L  R   : G  P  P  *  F  S  T  E  L  T  T  S  E  I  F  L  V  P  R :   W  I  *  V  S  S  K  E  T  Q  Y  A  G  L  D  F  S  N  T  A  F  L  T  L  L  G  N  K  V  E  M  K  F  F  C  W  E  V  *  V  E  I  I  Y  L   </second_frame>
            <third_frame>   K  S  L  K  *  N  R  R  *  F  V  S  P  *  Q  I  A  P  F  I  C  F  S  L  A  E  P  *  R  E  *  E  Y  G  G  R  S  *  R  R  Y  I  G  I  S  Q  R  Q  R  *  D  F  K  F  C  K  I  C  S  R  F  W  F  W  P  *  R  D  P  Q  C  H  T  Q  T  P  W  I  S  I  R  G  C  S   : G  H  *  E  R  E  M  G  A  Y  *  R  G  E  N  L  C  C  C  R  F  S  *  I  S  A  F  L  S  S  T  T  G  G  N  C  A  G  R  V  A   : E  K  I  G  S  C  S  L  *  N  W  L  P  A  S  Y  K  E  Q  V  G  G  D  G  K  D  T  C  L  K  E   : G  P  T  C  *  *  Q  S  *  K  F  A  V  A  D  T  K  *  R   : G  C  Q  S  G  G  Y  *  C  S  K  A  K  K  T  N  N  S  A  :  G  L  E  R  K  F  R  K  K  R  S  R  I  C  P  K  K  E  K  S  S  D  *  S  H  S  R  K  F  T  E  :  G  *  L  E  G  I  G  I  *  R  V  Q  L  Q  C  *  R  S  A  S  *  R  W  P  S  S  S  I  A  Q   : G  *  A  A  G  T  N  N  F  S  *  Y  G  :  V  *  G  D  A  N  E  *  L  C  R  K  Q  :  F  L  E  F  R  C  T  F  P  A  P  T  A  P  C  P  *  F  T  *  Y  F  L  F  E  S :   T  F  L  Y  K  D  A  S  R  R  L  C  *  A  G  K  R  N  S  *  I  W  W  L  P  I  *  G  :  I  W  V  *  L  E  K  R  G  S  E  Q  E  S  F  A  D  T  H  Y  C  C  F  V  K  N  V  V  C  I  S  E   : E  A  I  R  P  Q  E  I  L  F  Y  *  S  C  F  Q  K  *  S  S  *  S  N  T  S  C  *  I  S  S  D  R  R :   F  N  M  *  S  W  T  H  S  W  *  P  D  W  C  S  S  *  L  L  F  S  S  R :   N  V  Q  A  S  V  Q  T  C  L  *  P  L  Y  *  A  Q  H  G  N  F  Q  :  L  P  *  R  L  *  E  M  G  R  S  W  K  F  W  Y  V  *  A  *  N  A  S  S  Y  G  S  A  R  R  C  S  G  Y  C  L  G  P  F  P  *  E  :  A  H  H  D  S  L  R  N  *  Q  H  Q  R  S  F  W  S  Q   : G  G  S  R  S  H  Q  K  K  P  N  M  P  A  W  T  L  V  I  Q  H  F  *  L  C  W  A  I  K  L  R  *  N  F  S  A  G  K  S  K  L  R  S  F  I  Y  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0012A12.1" strand="+"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="56111" stop="56290"/>
                    <exon start="59847" stop="59969"/>
                    <exon start="60107" stop="60199"/>
                    <exon start="61227" stop="61283"/>
                    <exon start="61452" stop="61507"/>
                    <exon start="61633" stop="61725"/>
                    <exon start="62444" stop="62534"/>
                    <exon start="62657" stop="62694"/>
                    <exon start="62847" stop="62885"/>
                    <exon start="63506" stop="63582"/>
                    <exon start="63651" stop="63735"/>
                    <exon start="63815" stop="63911"/>
                    <exon start="64000" stop="64096"/>
                    <exon start="64969" stop="65040"/>
                    <exon start="65226" stop="65292"/>
                    <exon start="65371" stop="65496"/>
                    <exon start="66307" stop="66361"/>
                    <exon start="66446" stop="66496"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1494</number_coding_nucleotides>
                  <number_encoded_amino_acids>498</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QNPRESESMADEAEDAILAYLKDNDEISNSAKFAQDFGFGHDEILNVIRRLHGFRFVDAQDIRRERWVLTEEGKTYAAVGSPEFQLFSAVPPEGIAREELQKKLDPAVYKIGCQQAIKNKWVEMAKTHVSRKVQHADDKVKNLLLRIQNDEAVNQEDIDALKRRKLIIQQVWKGNSVRKGPEYAPKRKRAATDLTRENLQRGDWKELEFKEYNFSAKGQPVEGGHLHPLLKVRRQVQTIFLNMGFEEMPTNNYVESSFWNFDALFQPQQHPARDSHDTFFLKVPSSTKMLPEDYVERVKEIHESGGYQSRGYGYDWKREEANKNLLRTHTTAVSSRMLYALAKKPFAPKKYYSIDRVFRNEAVDRTHLAEFHQIEGLICDRGLTLGDLIGVLHDFFSRLGMSKLRFKPAYNPYTEPSMEIFSYHEGFKKWVEVGNSGMFRPEMLLPMGLPEDVRVIAWGLSLERPTMILYGIDNIRDLFGPKVDLGLIKRNPICRLGL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="63143" e_stop="63582"/>
            <exon e_start="63651" e_stop="63735"/>
            <exon e_start="63815" e_stop="63911"/>
            <exon e_start="64000" e_stop="64096"/>
            <exon e_start="64969" e_stop="65040"/>
            <exon e_start="65226" e_stop="65292"/>
            <exon e_start="65371" e_stop="65496"/>
            <exon e_start="66307" e_stop="66361"/>
            <exon e_start="66446" e_stop="66942"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.868" e_score="1.000"/>
          <exon-intron don_prob="0.945" acc_prob="0.964" e_score="1.000"/>
          <exon-intron don_prob="0.931" acc_prob="0.977" e_score="1.000"/>
          <exon-intron don_prob="0.945" acc_prob="0.988" e_score="0.990"/>
          <exon-intron don_prob="0.994" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.887" acc_prob="0.977" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.883" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="63143" e_stop="63582" e_length="440"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.868">
            <gDNA_intron_boundary i_start="63583" i_stop="63650" i_length="68"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="63651" e_stop="63735" e_length="85"/>
          </exon>
          <intron i_serial="2" don_prob="0.945" acc_prob="0.964">
            <gDNA_intron_boundary i_start="63736" i_stop="63814" i_length="79"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="63815" e_stop="63911" e_length="97"/>
          </exon>
          <intron i_serial="3" don_prob="0.931" acc_prob="0.977">
            <gDNA_intron_boundary i_start="63912" i_stop="63999" i_length="88"/>
          </intron>
          <exon e_serial="4" e_score="0.990">
            <gDNA_exon_boundary e_start="64000" e_stop="64096" e_length="97"/>
          </exon>
          <intron i_serial="4" don_prob="0.945" acc_prob="0.988">
            <gDNA_intron_boundary i_start="64097" i_stop="64968" i_length="872"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="64969" e_stop="65040" e_length="72"/>
          </exon>
          <intron i_serial="5" don_prob="0.994" acc_prob="0.991">
            <gDNA_intron_boundary i_start="65041" i_stop="65225" i_length="185"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="65226" e_stop="65292" e_length="67"/>
          </exon>
          <intron i_serial="6" don_prob="0.887" acc_prob="0.977">
            <gDNA_intron_boundary i_start="65293" i_stop="65370" i_length="78"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="65371" e_stop="65496" e_length="126"/>
          </exon>
          <intron i_serial="7" don_prob="0.999" acc_prob="0.991">
            <gDNA_intron_boundary i_start="65497" i_stop="66306" i_length="810"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="66307" e_stop="66361" e_length="55"/>
          </exon>
          <intron i_serial="8" don_prob="0.883" acc_prob="1.000">
            <gDNA_intron_boundary i_start="66362" i_stop="66445" i_length="84"/>
          </intron>
          <exon e_serial="9" e_score="0.998">
            <gDNA_exon_boundary e_start="66446" e_stop="66942" e_length="497"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63143" stop="63582"/>
              <exon start="63651" stop="63735"/>
              <exon start="63815" stop="63911"/>
              <exon start="64000" stop="64096"/>
              <exon start="64969" stop="65040"/>
              <exon start="65226" stop="65292"/>
              <exon start="65371" stop="65496"/>
              <exon start="66307" stop="66361"/>
              <exon start="66446" stop="66942"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U571623" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTTTTGGCTGCTGTCATTTTACTTGCTAAAGTTCCTACTTCATGATACATAACAGTTTCAAAGTACCTCTTCTGTAGACCAATTTCTAAACACTATTTTTTCATGTTGAACATTCATGAGCTTCTGATGGTAAACAGTCACATTTATTGAAGATGGATGGTAAAATATAGCTATTCAATATTCATGAGCTTTCAAGCTCAAACTGATGGTAAACCATACATTTCACAATGTAATCCATTTAGGAGTCTTCTCTGGTTATAGCTAATGGTTATTTGTGCACTGTCATGTTCTCTAGTAAAAATTGTTAGGATATGTATTTGTTTGAATTCTTGTCAAAGAAGTATATGTTAATGTGGTTTGCAGTTTTTGGAATTTCGATGCACTTTTCCAGCCCCAACAGCACCCTGCCCGTGATTCACATGATACTTTCTTTTTGAAAG : TACCTTCCTCTACAAAGATGCTTCCAGAAGATTATGTTGAGCGGGTAAAAGAAATTCATGAATCTGGTGGTTACCAATCTAGGGG : ATATGGGTATGATTGGAAAAGAGAGGAAGCGAACAAGAATCTTTTGCGGACACACACTACTGCTGTTTCGTCAAGAATGTTGTATGCATTAGCGAAG : AAGCCATTCGCCCCCAAGAAATACTATTCTATTGATCGTGTTTTCAGAAATGAAGCAGTTGATCGAACACATCTTGCTGAATTTCATCAGATAGAAG : GTTTAATATGTGATCGTGGACTCACTCTTGGTGACCTGATTGGTGTTCTTCATGACTTCTTTTCTCGTCTAG : GAATGTCCAAGCTTCGGTTCAAACCTGCTTATAACCCTTATACTGAGCCCAGCATGGAAATTTTCAG : CTACCATGAAGGCTTTAAGAAATGGGTAGAAGTTGGAAATTCTGGTATGTTTAGGCCTGAAATGCTTCTTCCTATGGGTCTGCCAGAAGATGTTCGGGTTATTGCCTGGGGCCTTTCCCTTGAGAG : GCCCACCATGATTCTCTACGGAATTGACAACATCAGAGATCTTTTTGGTCCCAAG : GTGGATCTAGGTCTCATCAAAAGAAACCCAATATGCCGGCTTGGACTTTAGTAATACAGCATTTTTGACTCTGCTGGGCAATAAAGTTGAGATGAAATTTTTCTGCTGGGAAGTCTAAGTTGAGATCATTTATTTACAATGGGAGGATTCTTGCCGATATTTGATCGTAGATGTTTTTTGTTGATACAAATGTGAAGATTAAATATCAGATCGGAGGACGCACTATATACAAGTTTCTTGATGTTATATCTAAATTTAGTCCCTTCAATATACTTATTTTGGGTATCTAAGGACAGGTTGTTGATACGAGTGTTGCTGCTCCTTGAATCAATGACATTAACTCAAATGAGTATAATATATCTCTCCCAAACACTTCTATCTTTAATGCATTCAAGCTCTCGTATAAATTAGTTGGGATAGTGAATCATTTGTTCCTGTCTAGACAATGTCGACTTCTTGAAATTTATAATATGCAGATGTAGTTTGCTTGTTTTTCA</gDNA_template>
            <first_frame> V  L  A  A  V  I  L  L  A  K  V  P  T  S  *  Y  I  T  V  S  K  Y  L  F  C  R  P  I  S  K  H  Y  F  F  M  L  N  I  H  E  L  L  M  V  N  S  H  I  Y  *  R  W  M  V  K  Y  S  Y  S  I  F  M  S  F  Q  A  Q  T  D  G  K  P  Y  I  S  Q  C  N  P  F  R  S  L  L  W  L  *  L  M  V  I  C  A  L  S  C  S  L  V  K  I  V  R  I  C  I  C  L  N  S  C  Q  R  S  I  C  *  C  G  L  Q  F  L  E  F  R  C  T  F  P  A  P  T  A  P  C  P  *  F  T  *  Y  F  L  F  E  S :   T  F  L  Y  K  D  A  S  R  R  L  C  *  A  G  K  R  N  S  *  I  W  W  L  P  I  *  G  :  I  W  V  *  L  E  K  R  G  S  E  Q  E  S  F  A  D  T  H  Y  C  C  F  V  K  N  V  V  C  I  S  E   : E  A  I  R  P  Q  E  I  L  F  Y  *  S  C  F  Q  K  *  S  S  *  S  N  T  S  C  *  I  S  S  D  R  R :   F  N  M  *  S  W  T  H  S  W  *  P  D  W  C  S  S  *  L  L  F  S  S  R :   N  V  Q  A  S  V  Q  T  C  L  *  P  L  Y  *  A  Q  H  G  N  F  Q  :  L  P  *  R  L  *  E  M  G  R  S  W  K  F  W  Y  V  *  A  *  N  A  S  S  Y  G  S  A  R  R  C  S  G  Y  C  L  G  P  F  P  *  E  :  A  H  H  D  S  L  R  N  *  Q  H  Q  R  S  F  W  S  Q   : G  G  S  R  S  H  Q  K  K  P  N  M  P  A  W  T  L  V  I  Q  H  F  *  L  C  W  A  I  K  L  R  *  N  F  S  A  G  K  S  K  L  R  S  F  I  Y  N  G  R  I  L  A  D  I  *  S  *  M  F  F  V  D  T  N  V  K  I  K  Y  Q  I  G  G  R  T  I  Y  K  F  L  D  V  I  S  K  F  S  P  F  N  I  L  I  L  G  I  *  G  Q  V  V  D  T  S  V  A  A  P  *  I  N  D  I  N  S  N  E  Y  N  I  S  L  P  N  T  S  I  F  N  A  F  K  L  S  Y  K  L  V  G  I  V  N  H  L  F  L  S  R  Q  C  R  L  L  E  I  Y  N  M  Q  M  *  F  A  C  F  S </first_frame>
            <second_frame>  F  W  L  L  S  F  Y  L  L  K  F  L  L  H  D  T  *  Q  F  Q  S  T  S  S  V  D  Q  F  L  N  T  I  F  S  C  *  T  F  M  S  F  *  W  *  T  V  T  F  I  E  D  G  W  *  N  I  A  I  Q  Y  S  *  A  F  K  L  K  L  M  V  N  H  T  F  H  N  V  I  H  L  G  V  F  S  G  Y  S  *  W  L  F  V  H  C  H  V  L  *  *  K  L  L  G  Y  V  F  V  *  I  L  V  K  E  V  Y  V  N  V  V  C  S  F  W  N  F  D  A  L  F  Q  P  Q  Q  H  P  A  R  D  S  H  D  T  F  F  L  K   : V  P  S  S  T  K  M  L  P  E  D  Y  V  E  R  V  K  E  I  H  E  S  G  G  Y  Q  S  R  G :   Y  G  Y  D  W  K  R  E  E  A  N  K  N  L  L  R  T  H  T  T  A  V  S  S  R  M  L  Y  A  L  A  K  :  K  P  F  A  P  K  K  Y  Y  S  I  D  R  V  F  R  N  E  A  V  D  R  T  H  L  A  E  F  H  Q  I  E   : G  L  I  C  D  R  G  L  T  L  G  D  L  I  G  V  L  H  D  F  F  S  R  L   : G  M  S  K  L  R  F  K  P  A  Y  N  P  Y  T  E  P  S  M  E  I  F  S :   Y  H  E  G  F  K  K  W  V  E  V  G  N  S  G  M  F  R  P  E  M  L  L  P  M  G  L  P  E  D  V  R  V  I  A  W  G  L  S  L  E  R :   P  T  M  I  L  Y  G  I  D  N  I  R  D  L  F  G  P  K  :  V  D  L  G  L  I  K  R  N  P  I  C  R  L  G  L  *  *  Y  S  I  F  D  S  A  G  Q  *  S  *  D  E  I  F  L  L  G  S  L  S  *  D  H  L  F  T  M  G  G  F  L  P  I  F  D  R  R  C  F  L  L  I  Q  M  *  R  L  N  I  R  S  E  D  A  L  Y  T  S  F  L  M  L  Y  L  N  L  V  P  S  I  Y  L  F  W  V  S  K  D  R  L  L  I  R  V  L  L  L  L  E  S  M  T  L  T  Q  M  S  I  I  Y  L  S  Q  T  L  L  S  L  M  H  S  S  S  R  I  N  *  L  G  *  *  I  I  C  S  C  L  D  N  V  D  F  L  K  F  I  I  C  R  C  S  L  L  V  F   </second_frame>
            <third_frame>   F  G  C  C  H  F  T  C  *  S  S  Y  F  M  I  H  N  S  F  K  V  P  L  L  *  T  N  F  *  T  L  F  F  H  V  E  H  S  *  A  S  D  G  K  Q  S  H  L  L  K  M  D  G  K  I  *  L  F  N  I  H  E  L  S  S  S  N  *  W  *  T  I  H  F  T  M  *  S  I  *  E  S  S  L  V  I  A  N  G  Y  L  C  T  V  M  F  S  S  K  N  C  *  D  M  Y  L  F  E  F  L  S  K  K  Y  M  L  M  W  F  A  V  F  G  I  S  M  H  F  S  S  P  N  S  T  L  P  V  I  H  M  I  L  S  F  *  K  :  Y  L  P  L  Q  R  C  F  Q  K  I  M  L  S  G  *  K  K  F  M  N  L  V  V  T  N  L  G   : D  M  G  M  I  G  K  E  R  K  R  T  R  I  F  C  G  H  T  L  L  L  F  R  Q  E  C  C  M  H  *  R  R :   S  H  S  P  P  R  N  T  I  L  L  I  V  F  S  E  M  K  Q  L  I  E  H  I  L  L  N  F  I  R  *  K  :  V  *  Y  V  I  V  D  S  L  L  V  T  *  L  V  F  F  M  T  S  F  L  V  *  :  E  C  P  S  F  G  S  N  L  L  I  T  L  I  L  S  P  A  W  K  F  S   : A  T  M  K  A  L  R  N  G  *  K  L  E  I  L  V  C  L  G  L  K  C  F  F  L  W  V  C  Q  K  M  F  G  L  L  P  G  A  F  P  L  R   : G  P  P  *  F  S  T  E  L  T  T  S  E  I  F  L  V  P  R :   W  I  *  V  S  S  K  E  T  Q  Y  A  G  L  D  F  S  N  T  A  F  L  T  L  L  G  N  K  V  E  M  K  F  F  C  W  E  V  *  V  E  I  I  Y  L  Q  W  E  D  S  C  R  Y  L  I  V  D  V  F  C  *  Y  K  C  E  D  *  I  S  D  R  R  T  H  Y  I  Q  V  S  *  C  Y  I  *  I  *  S  L  Q  Y  T  Y  F  G  Y  L  R  T  G  C  *  Y  E  C  C  C  S  L  N  Q  *  H  *  L  K  *  V  *  Y  I  S  P  K  H  F  Y  L  *  C  I  Q  A  L  V  *  I  S  W  D  S  E  S  F  V  P  V  *  T  M  S  T  S  *  N  L  *  Y  A  D  V  V  C  L  F  F  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0012A12.1" strand="+"/>
                <serials PGL_serial="7" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="63468" stop="63582"/>
                    <exon start="63651" stop="63735"/>
                    <exon start="63815" stop="63911"/>
                    <exon start="64000" stop="64096"/>
                    <exon start="64969" stop="65040"/>
                    <exon start="65226" stop="65292"/>
                    <exon start="65371" stop="65496"/>
                    <exon start="66307" stop="66361"/>
                    <exon start="66446" stop="66496"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>762</number_coding_nucleotides>
                  <number_encoded_amino_acids>254</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ILVKEVYVNVVCSFWNFDALFQPQQHPARDSHDTFFLKVPSSTKMLPEDYVERVKEIHESGGYQSRGYGYDWKREEANKNLLRTHTTAVSSRMLYALAKKPFAPKKYYSIDRVFRNEAVDRTHLAEFHQIEGLICDRGLTLGDLIGVLHDFFSRLGMSKLRFKPAYNPYTEPSMEIFSYHEGFKKWVEVGNSGMFRPEMLLPMGLPEDVRVIAWGLSLERPTMILYGIDNIRDLFGPKVDLGLIKRNPICRLGL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0012A12.1" strand="+"/>
                <serials PGL_serial="7" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="66641" stop="66856"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>213</number_coding_nucleotides>
                  <number_encoded_amino_acids>71</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RLNIRSEDALYTSFLMLYLNLVPSIYLFWVSKDRLLIRVLLLLESMTLTQMSIIYLSQTLLSLMHSSSRIN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="-" PGL_start="75493" PGL_stop="67400"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="75493" e_stop="75203"/>
            <exon e_start="74421" e_stop="74383"/>
            <exon e_start="74292" e_stop="74144"/>
            <exon e_start="73998" e_stop="73923"/>
            <exon e_start="72041" e_stop="71747"/>
            <exon e_start="71674" e_stop="71565"/>
            <exon e_start="71464" e_stop="71417"/>
            <exon e_start="71330" e_stop="70789"/>
            <exon e_start="70644" e_stop="70534"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.936" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.960" e_score="1.000"/>
          <exon-intron don_prob="0.758" acc_prob="0.740" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.988" e_score="1.000"/>
          <exon-intron don_prob="0.828" acc_prob="0.748" e_score="0.993"/>
          <exon-intron don_prob="0.971" acc_prob="0.770" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.274" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.989" e_score="1.000"/>
          <exon-only e_score="0.910"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="75493" e_stop="75203" e_length="291"/>
          </exon>
          <intron i_serial="1" don_prob="0.936" acc_prob="0.998">
            <gDNA_intron_boundary i_start="75202" i_stop="74422" i_length="781"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="74421" e_stop="74383" e_length="39"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.960">
            <gDNA_intron_boundary i_start="74382" i_stop="74293" i_length="90"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="74292" e_stop="74144" e_length="149"/>
          </exon>
          <intron i_serial="3" don_prob="0.758" acc_prob="0.740">
            <gDNA_intron_boundary i_start="74143" i_stop="73999" i_length="145"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="73998" e_stop="73923" e_length="76"/>
          </exon>
          <intron i_serial="4" don_prob="0.999" acc_prob="0.988">
            <gDNA_intron_boundary i_start="73922" i_stop="72042" i_length="1881"/>
          </intron>
          <exon e_serial="5" e_score="0.993">
            <gDNA_exon_boundary e_start="72041" e_stop="71747" e_length="295"/>
          </exon>
          <intron i_serial="5" don_prob="0.828" acc_prob="0.748">
            <gDNA_intron_boundary i_start="71746" i_stop="71675" i_length="72"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="71674" e_stop="71565" e_length="110"/>
          </exon>
          <intron i_serial="6" don_prob="0.971" acc_prob="0.770">
            <gDNA_intron_boundary i_start="71564" i_stop="71465" i_length="100"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="71464" e_stop="71417" e_length="48"/>
          </exon>
          <intron i_serial="7" don_prob="0.996" acc_prob="0.274">
            <gDNA_intron_boundary i_start="71416" i_stop="71331" i_length="86"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="71330" e_stop="70789" e_length="542"/>
          </exon>
          <intron i_serial="8" don_prob="0.996" acc_prob="0.989">
            <gDNA_intron_boundary i_start="70788" i_stop="70645" i_length="144"/>
          </intron>
          <exon e_serial="9" e_score="0.910">
            <gDNA_exon_boundary e_start="70644" e_stop="70534" e_length="111"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75493" stop="75203"/>
              <exon start="74421" stop="74383"/>
              <exon start="74292" stop="74144"/>
              <exon start="73998" stop="73923"/>
              <exon start="72041" stop="71747"/>
              <exon start="71674" stop="71565"/>
              <exon start="71464" stop="71417"/>
              <exon start="71330" stop="70789"/>
              <exon start="70644" stop="70534"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U580003" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CACAAGTATCCTAAAATTGAGAGTGAGGGAGGGTGTTAGGGTTTCCAATTCCGATTCTTCACCTGCAAATTAGGACCGAAGAAGAAAGAGAAAGATGTGGCATGAAGCTCGGAGGTCGGAGAAGAAAGTTCACGATATGATGGACGCTGCTCGTAAGAGAGCTCAAAGACGGGCCATCTATCTCGCTAAACGCCGTGGTGATCCACAGCAATCCATTCAAGCCATCGGCTCTCGTTGTCGTATCTACCGCGACGACGCTCTTTATCAAGCCACCGAGGATCAGCAGGGAAT : GATACCTTGGAATGGGAAACAAGACATTTTGATTGACAG : ATTTGATGGCCGTGCTCTTCTTGATTTCATTCGTGATCCTAGTTCTCGACATCGTCGGGCCCCAGAAAGAACAGAGGAAGAGGAAGAACTAGAAGAGTTTGTTAATTTTCAGCGTTATCGGGATTTAATTAAGCATCGGCGTAGAGGAT : TTAAAGATGAAGAGGGTATGCAACATGTTAATCAGGAGATGGAGGCTAAAACCACTGCACTGCTCGGCTCTGACAG : ACCTCAGCTTTCTCAGCCTCCAGTGAGCAAGGGGTCGTATTCACAAGTGGGTTTCTCATATGATGGAGAGGGGAAAGATGAAGCTCACTTTTCGGATGGTGAAGAAGAAGATGAAGATGACGATGATGATGAGGAAGAAGAAGATTTTAACAGCGATGATAGCAACGATGAAGTGATGGAGTCAATTGCCAAGGATTATGGTGTGAAACGGTATGGATGGCTTGTCTACACGGACAAAAAGGCCAAGGAGGAAGAAAGGAGGCAAAGAGAAGTTATTAAGGGAGATCCTGCAATA : AGGAAGCTAAGTCGCAAAGAGAGAAGAAAAGCTTCTCAACTAGAAAGGGAGAGGGAAAGAGAAGCTGCCCGTATTACCGGTAGTAGAGTTCTTCATCATGATCCCTATCG : TGAATCTCGTCGAAGTCCGACATATGAAGCTTATTCACGTTCCAGAAG : ATCCAGGTCAAGGTCTCTCTCATACTCCCCTCCCCATTCAAGGCGCTACGAACGTGGAGGCAAATCTGATGATATTTACCAAGGCAAAGAAAGAACTCCGAAGATAGAGTATATTACTGAATTTGGTGGCGCAGATGATGAGAACAAGCCTAAAGTTGAAGGATATTCTCCACCACCATCTCCTCCACCTCGAACTGATCCATTAAGCCGGTCGGAGCACTTGACCTTTTATTCTTGCAAAGCTAGATTGGACAGTCTTTTCTCTGCTGCAGCTTTTCATCCATTTGTTAGCTGAGGAACTTAATGTGGTTTAGAATATATCACCATTTACACCTGTTCGAATAACTGTCAAGGGGAAGAGGGAGCAAGTCTCCATTTTCACTGTTCAGTTTGCATGATAACATGAAACATTTCTTGTTTAAAATCTCACTTTTCTGCAGGCCATCAACTGGTCGTATTCTTGAGGCCCTCCATGTAGATCCTGCATCTGGGGTATCTATTGATAAGGATAAGAGTGGCCAAATGTTGAAAACACCAACAAG : TGCGTCTTCAGCACTATCTAAGTTGAACAAGACAACTAGTAGTTCAAGTCTCTCTAAACAGCAGGGTGAAAAGAAGGAAACACCTCAGGAGAGACTTAAGCGGATTATGAG</gDNA_template>
            <first_frame> H  K  Y  P  K  I  E  S  E  G  G  C  *  G  F  Q  F  R  F  F  T  C  K  L  G  P  K  K  K  E  K  D  V  A  *  S  S  E  V  G  E  E  S  S  R  Y  D  G  R  C  S  *  E  S  S  K  T  G  H  L  S  R  *  T  P  W  *  S  T  A  I  H  S  S  H  R  L  S  L  S  Y  L  P  R  R  R  S  L  S  S  H  R  G  S  A  G  N  :  D  T  L  E  W  E  T  R  H  F  D  *  Q  :  I  *  W  P  C  S  S  *  F  H  S  *  S  *  F  S  T  S  S  G  P  R  K  N  R  G  R  G  R  T  R  R  V  C  *  F  S  A  L  S  G  F  N  *  A  S  A  *  R  I :   *  R  *  R  G  Y  A  T  C  *  S  G  D  G  G  *  N  H  C  T  A  R  L  *  Q  :  T  S  A  F  S  A  S  S  E  Q  G  V  V  F  T  S  G  F  L  I  *  W  R  G  E  R  *  S  S  L  F  G  W  *  R  R  R  *  R  *  R  *  *  *  G  R  R  R  F  *  Q  R  *  *  Q  R  *  S  D  G  V  N  C  Q  G  L  W  C  E  T  V  W  M  A  C  L  H  G  Q  K  G  Q  G  G  R  K  E  A  K  R  S  Y  *  G  R  S  C  N   : K  E  A  K  S  Q  R  E  K  K  S  F  S  T  R  K  G  E  G  K  R  S  C  P  Y  Y  R  *  *  S  S  S  S  *  S  L  S  :  *  I  S  S  K  S  D  I  *  S  L  F  T  F  Q  K  :  I  Q  V  K  V  S  L  I  L  P  S  P  F  K  A  L  R  T  W  R  Q  I  *  *  Y  L  P  R  Q  R  K  N  S  E  D  R  V  Y  Y  *  I  W  W  R  R  *  *  E  Q  A  *  S  *  R  I  F  S  T  T  I  S  S  T  S  N  *  S  I  K  P  V  G  A  L  D  L  L  F  L  Q  S  *  I  G  Q  S  F  L  C  C  S  F  S  S  I  C  *  L  R  N  L  M  W  F  R  I  Y  H  H  L  H  L  F  E  *  L  S  R  G  R  G  S  K  S  P  F  S  L  F  S  L  H  D  N  M  K  H  F  L  F  K  I  S  L  F  C  R  P  S  T  G  R  I  L  E  A  L  H  V  D  P  A  S  G  V  S  I  D  K  D  K  S  G  Q  M  L  K  T  P  T  S :   A  S  S  A  L  S  K  L  N  K  T  T  S  S  S  S  L  S  K  Q  Q  G  E  K  K  E  T  P  Q  E  R  L  K  R  I  M   </first_frame>
            <second_frame>  T  S  I  L  K  L  R  V  R  E  G  V  R  V  S  N  S  D  S  S  P  A  N  *  D  R  R  R  K  R  K  M  W  H  E  A  R  R  S  E  K  K  V  H  D  M  M  D  A  A  R  K  R  A  Q  R  R  A  I  Y  L  A  K  R  R  G  D  P  Q  Q  S  I  Q  A  I  G  S  R  C  R  I  Y  R  D  D  A  L  Y  Q  A  T  E  D  Q  Q  G  M :   I  P  W  N  G  K  Q  D  I  L  I  D  R :   F  D  G  R  A  L  L  D  F  I  R  D  P  S  S  R  H  R  R  A  P  E  R  T  E  E  E  E  E  L  E  E  F  V  N  F  Q  R  Y  R  D  L  I  K  H  R  R  R  G   : F  K  D  E  E  G  M  Q  H  V  N  Q  E  M  E  A  K  T  T  A  L  L  G  S  D  R :   P  Q  L  S  Q  P  P  V  S  K  G  S  Y  S  Q  V  G  F  S  Y  D  G  E  G  K  D  E  A  H  F  S  D  G  E  E  E  D  E  D  D  D  D  D  E  E  E  E  D  F  N  S  D  D  S  N  D  E  V  M  E  S  I  A  K  D  Y  G  V  K  R  Y  G  W  L  V  Y  T  D  K  K  A  K  E  E  E  R  R  Q  R  E  V  I  K  G  D  P  A  I  :  R  K  L  S  R  K  E  R  R  K  A  S  Q  L  E  R  E  R  E  R  E  A  A  R  I  T  G  S  R  V  L  H  H  D  P  Y  R :   E  S  R  R  S  P  T  Y  E  A  Y  S  R  S  R  R :   S  R  S  R  S  L  S  Y  S  P  P  H  S  R  R  Y  E  R  G  G  K  S  D  D  I  Y  Q  G  K  E  R  T  P  K  I  E  Y  I  T  E  F  G  G  A  D  D  E  N  K  P  K  V  E  G  Y  S  P  P  P  S  P  P  P  R  T  D  P  L  S  R  S  E  H  L  T  F  Y  S  C  K  A  R  L  D  S  L  F  S  A  A  A  F  H  P  F  V  S  *  G  T  *  C  G  L  E  Y  I  T  I  Y  T  C  S  N  N  C  Q  G  E  E  G  A  S  L  H  F  H  C  S  V  C  M  I  T  *  N  I  S  C  L  K  S  H  F  S  A  G  H  Q  L  V  V  F  L  R  P  S  M  *  I  L  H  L  G  Y  L  L  I  R  I  R  V  A  K  C  *  K  H  Q  Q   : V  R  L  Q  H  Y  L  S  *  T  R  Q  L  V  V  Q  V  S  L  N  S  R  V  K  R  R  K  H  L  R  R  D  L  S  G  L  *  </second_frame>
            <third_frame>   Q  V  S  *  N  *  E  *  G  R  V  L  G  F  P  I  P  I  L  H  L  Q  I  R  T  E  E  E  R  E  R  C  G  M  K  L  G  G  R  R  R  K  F  T  I  *  W  T  L  L  V  R  E  L  K  D  G  P  S  I  S  L  N  A  V  V  I  H  S  N  P  F  K  P  S  A  L  V  V  V  S  T  A  T  T  L  F  I  K  P  P  R  I  S  R  E   : *  Y  L  G  M  G  N  K  T  F  *  L  T   : D  L  M  A  V  L  F  L  I  S  F  V  I  L  V  L  D  I  V  G  P  Q  K  E  Q  R  K  R  K  N  *  K  S  L  L  I  F  S  V  I  G  I  *  L  S  I  G  V  E  D  :  L  K  M  K  R  V  C  N  M  L  I  R  R  W  R  L  K  P  L  H  C  S  A  L  T   : D  L  S  F  L  S  L  Q  *  A  R  G  R  I  H  K  W  V  S  H  M  M  E  R  G  K  M  K  L  T  F  R  M  V  K  K  K  M  K  M  T  M  M  M  R  K  K  K  I  L  T  A  M  I  A  T  M  K  *  W  S  Q  L  P  R  I  M  V  *  N  G  M  D  G  L  S  T  R  T  K  R  P  R  R  K  K  G  G  K  E  K  L  L  R  E  I  L  Q  * :   G  S  *  V  A  K  R  E  E  K  L  L  N  *  K  G  R  G  K  E  K  L  P  V  L  P  V  V  E  F  F  I  M  I  P  I   : V  N  L  V  E  V  R  H  M  K  L  I  H  V  P  E   : D  P  G  Q  G  L  S  H  T  P  L  P  I  Q  G  A  T  N  V  E  A  N  L  M  I  F  T  K  A  K  K  E  L  R  R  *  S  I  L  L  N  L  V  A  Q  M  M  R  T  S  L  K  L  K  D  I  L  H  H  H  L  L  H  L  E  L  I  H  *  A  G  R  S  T  *  P  F  I  L  A  K  L  D  W  T  V  F  S  L  L  Q  L  F  I  H  L  L  A  E  E  L  N  V  V  *  N  I  S  P  F  T  P  V  R  I  T  V  K  G  K  R  E  Q  V  S  I  F  T  V  Q  F  A  *  *  H  E  T  F  L  V  *  N  L  T  F  L  Q  A  I  N  W  S  Y  S  *  G  P  P  C  R  S  C  I  W  G  I  Y  *  *  G  *  E  W  P  N  V  E  N  T  N  K  :  C  V  F  S  T  I  *  V  E  Q  D  N  *  *  F  K  S  L  *  T  A  G  *  K  E  G  N  T  S  G  E  T  *  A  D  Y  E </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0012A12.1" strand="-"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="75420" stop="75203"/>
                    <exon start="74421" stop="74383"/>
                    <exon start="74292" stop="74144"/>
                    <exon start="73998" stop="73923"/>
                    <exon start="72041" stop="71747"/>
                    <exon start="71674" stop="71565"/>
                    <exon start="71464" stop="71417"/>
                    <exon start="71330" stop="71036"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1227</number_coding_nucleotides>
                  <number_encoded_amino_acids>409</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DRRRKRKMWHEARRSEKKVHDMMDAARKRAQRRAIYLAKRRGDPQQSIQAIGSRCRIYRDDALYQATEDQQGMIPWNGKQDILIDRFDGRALLDFIRDPSSRHRRAPERTEEEEELEEFVNFQRYRDLIKHRRRGFKDEEGMQHVNQEMEAKTTALLGSDRPQLSQPPVSKGSYSQVGFSYDGEGKDEAHFSDGEEEDEDDDDDEEEEDFNSDDSNDEVMESIAKDYGVKRYGWLVYTDKKAKEEERRQREVIKGDPAIRKLSRKERRKASQLEREREREAARITGSRVLHHDPYRESRRSPTYEAYSRSRRSRSRSLSYSPPHSRRYERGGKSDDIYQGKERTPKIEYITEFGGADDENKPKVEGYSPPPSPPPRTDPLSRSEHLTFYSCKARLDSLFSAAAFHPFVS*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0012A12.1" strand="-"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="70985" stop="70789"/>
                    <exon start="70644" stop="70536"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>306</number_coding_nucleotides>
                  <number_encoded_amino_acids>102</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LSRGRGSKSPFSLFSLHDNMKHFLFKISLFCRPSTGRILEALHVDPASGVSIDKDKSGQMLKTPTSASSALSKLNKTTSSSSLSKQQGEKKETPQERLKRIM</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="71622" e_stop="71565"/>
            <exon e_start="71464" e_stop="71417"/>
            <exon e_start="71330" e_stop="71121"/>
            <exon e_start="70890" e_stop="70789"/>
            <exon e_start="70644" e_stop="70514"/>
            <exon e_start="70362" e_stop="70224"/>
            <exon e_start="67884" e_stop="67717"/>
            <exon e_start="67644" e_stop="67400"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.971" acc_prob="0.770" e_score="0.966"/>
          <exon-intron don_prob="0.996" acc_prob="0.274" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.337" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.990" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.692" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.966">
            <gDNA_exon_boundary e_start="71622" e_stop="71565" e_length="58"/>
          </exon>
          <intron i_serial="1" don_prob="0.971" acc_prob="0.770">
            <gDNA_intron_boundary i_start="71564" i_stop="71465" i_length="100"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="71464" e_stop="71417" e_length="48"/>
          </exon>
          <intron i_serial="2" don_prob="0.996" acc_prob="0.274">
            <gDNA_intron_boundary i_start="71416" i_stop="71331" i_length="86"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="71330" e_stop="71121" e_length="210"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.993">
            <gDNA_intron_boundary i_start="71120" i_stop="70891" i_length="230"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="70890" e_stop="70789" e_length="102"/>
          </exon>
          <intron i_serial="4" don_prob="0.996" acc_prob="0.989">
            <gDNA_intron_boundary i_start="70788" i_stop="70645" i_length="144"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="70644" e_stop="70514" e_length="131"/>
          </exon>
          <intron i_serial="5" don_prob="0.337" acc_prob="0.999">
            <gDNA_intron_boundary i_start="70513" i_stop="70363" i_length="151"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="70362" e_stop="70224" e_length="139"/>
          </exon>
          <intron i_serial="6" don_prob="0.990" acc_prob="0.000">
            <gDNA_intron_boundary i_start="70223" i_stop="67885" i_length="2339"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="67884" e_stop="67717" e_length="168"/>
          </exon>
          <intron i_serial="7" don_prob="0.998" acc_prob="0.692">
            <gDNA_intron_boundary i_start="67716" i_stop="67645" i_length="72"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="67644" e_stop="67400" e_length="245"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71622" stop="71565"/>
              <exon start="71464" stop="71417"/>
              <exon start="71330" stop="71121"/>
              <exon start="70890" stop="70789"/>
              <exon start="70644" stop="70514"/>
              <exon start="70362" stop="70224"/>
              <exon start="67884" stop="67717"/>
              <exon start="67644" stop="67400"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U577802" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GGGAAAGAGAAGCTGCCCGTATTACCGGTAGTAGAGTTCTTCATCATGATCCCTATCG : TGAATCTCGTCGAAGTCCGACATATGAAGCTTATTCACGTTCCAGAAG : ATCCAGGTCAAGGTCTCTCTCATACTCCCCTCCCCATTCAAGGCGCTACGAACGTGGAGGCAAATCTGATGATATTTACCAAGGCAAAGAAAGAACTCCGAAGATAGAGTATATTACTGAATTTGGTGGCGCAGATGATGAGAACAAGCCTAAAGTTGAAGGATATTCTCCACCACCATCTCCTCCACCTCGAACTGATCCATTAAGCCG : GCCATCAACTGGTCGTATTCTTGAGGCCCTCCATGTAGATCCTGCATCTGGGGTATCTATTGATAAGGATAAGAGTGGCCAAATGTTGAAAACACCAACAAG : TGCGTCTTCAGCACTATCTAAGTTGAACAAGACAACTAGTAGTTCAAGTCTCTCTAAACAGCAGGGTGAAAAGAAGGAAACACCTCAGGAGAGACTTAAGCGGATTATGAGCAAACAATTGAACAAACAAA : TCAAGAAAGATACAGCTATTGAAACTGCCAAGAAAAGAGAACAAGAGAAACAGAGGCTTGAAAAGCTGGCAGAGACAAGCCGGGTAAGCCGGTATCGTCGCCGAAGCCGTAGTAGAAGTTACAGCCGTTCCCCTCGAAG : GCATCGACGTAGCCGGAGTCCCAGCAGAGAAAGGAGTTCTCGTAGATATCGCTCACGTTCAAGGTCTGGCTCACGGTCGCGCACTCACTCTTGCTCACATTCGCCTTCGCATTCTCACTCCAGTTCACGCTCTCTTTCTCGTTCCATTTCCCGGTCTCGTTCACCTCG : TAGGAGACGATCAAGATACTGATACTACAGGCATGAACGAGTGTTAGCTGTGGGCGATATATATTACTGATGTATTGTTGTACTGGTAAACTTATAGCTGAAGCTGAATTTGGGTTGATGATGTGAAGTTTTATTCATGAGTTGTGTTTATTGTTTTTGGTTGCTTTTTGAACTTGCTGAAGAATATTTAGCGTGACAATTATATTATTTCAGCTCCTTTAGTAGGATGATGCATCATTCCAGTA</gDNA_template>
            <first_frame> G  K  E  K  L  P  V  L  P  V  V  E  F  F  I  M  I  P  I   : V  N  L  V  E  V  R  H  M  K  L  I  H  V  P  E   : D  P  G  Q  G  L  S  H  T  P  L  P  I  Q  G  A  T  N  V  E  A  N  L  M  I  F  T  K  A  K  K  E  L  R  R  *  S  I  L  L  N  L  V  A  Q  M  M  R  T  S  L  K  L  K  D  I  L  H  H  H  L  L  H  L  E  L  I  H  *  A   : G  H  Q  L  V  V  F  L  R  P  S  M  *  I  L  H  L  G  Y  L  L  I  R  I  R  V  A  K  C  *  K  H  Q  Q   : V  R  L  Q  H  Y  L  S  *  T  R  Q  L  V  V  Q  V  S  L  N  S  R  V  K  R  R  K  H  L  R  R  D  L  S  G  L  *  A  N  N  *  T  N  K  :  S  R  K  I  Q  L  L  K  L  P  R  K  E  N  K  R  N  R  G  L  K  S  W  Q  R  Q  A  G  *  A  G  I  V  A  E  A  V  V  E  V  T  A  V  P  L  E   : G  I  D  V  A  G  V  P  A  E  K  G  V  L  V  D  I  A  H  V  Q  G  L  A  H  G  R  A  L  T  L  A  H  I  R  L  R  I  L  T  P  V  H  A  L  F  L  V  P  F  P  G  L  V  H  L   : V  G  D  D  Q  D  T  D  T  T  G  M  N  E  C  *  L  W  A  I  Y  I  T  D  V  L  L  Y  W  *  T  Y  S  *  S  *  I  W  V  D  D  V  K  F  Y  S  *  V  V  F  I  V  F  G  C  F  L  N  L  L  K  N  I  *  R  D  N  Y  I  I  S  A  P  L  V  G  *  C  I  I  P  V </first_frame>
            <second_frame>  G  K  R  S  C  P  Y  Y  R  *  *  S  S  S  S  *  S  L  S  :  *  I  S  S  K  S  D  I  *  S  L  F  T  F  Q  K  :  I  Q  V  K  V  S  L  I  L  P  S  P  F  K  A  L  R  T  W  R  Q  I  *  *  Y  L  P  R  Q  R  K  N  S  E  D  R  V  Y  Y  *  I  W  W  R  R  *  *  E  Q  A  *  S  *  R  I  F  S  T  T  I  S  S  T  S  N  *  S  I  K  P  :  A  I  N  W  S  Y  S  *  G  P  P  C  R  S  C  I  W  G  I  Y  *  *  G  *  E  W  P  N  V  E  N  T  N  K  :  C  V  F  S  T  I  *  V  E  Q  D  N  *  *  F  K  S  L  *  T  A  G  *  K  E  G  N  T  S  G  E  T  *  A  D  Y  E  Q  T  I  E  Q  T  N :   Q  E  R  Y  S  Y  *  N  C  Q  E  K  R  T  R  E  T  E  A  *  K  A  G  R  D  K  P  G  K  P  V  S  S  P  K  P  *  *  K  L  Q  P  F  P  S  K  :  A  S  T  *  P  E  S  Q  Q  R  K  E  F  S  *  I  S  L  T  F  K  V  W  L  T  V  A  H  S  L  L  L  T  F  A  F  A  F  S  L  Q  F  T  L  S  F  S  F  H  F  P  V  S  F  T  S  :  *  E  T  I  K  I  L  I  L  Q  A  *  T  S  V  S  C  G  R  Y  I  L  L  M  Y  C  C  T  G  K  L  I  A  E  A  E  F  G  L  M  M  *  S  F  I  H  E  L  C  L  L  F  L  V  A  F  *  T  C  *  R  I  F  S  V  T  I  I  L  F  Q  L  L  *  *  D  D  A  S  F  Q   </second_frame>
            <third_frame>   E  R  E  A  A  R  I  T  G  S  R  V  L  H  H  D  P  Y  R :   E  S  R  R  S  P  T  Y  E  A  Y  S  R  S  R  R :   S  R  S  R  S  L  S  Y  S  P  P  H  S  R  R  Y  E  R  G  G  K  S  D  D  I  Y  Q  G  K  E  R  T  P  K  I  E  Y  I  T  E  F  G  G  A  D  D  E  N  K  P  K  V  E  G  Y  S  P  P  P  S  P  P  P  R  T  D  P  L  S  R :   P  S  T  G  R  I  L  E  A  L  H  V  D  P  A  S  G  V  S  I  D  K  D  K  S  G  Q  M  L  K  T  P  T  S :   A  S  S  A  L  S  K  L  N  K  T  T  S  S  S  S  L  S  K  Q  Q  G  E  K  K  E  T  P  Q  E  R  L  K  R  I  M  S  K  Q  L  N  K  Q   : I  K  K  D  T  A  I  E  T  A  K  K  R  E  Q  E  K  Q  R  L  E  K  L  A  E  T  S  R  V  S  R  Y  R  R  R  S  R  S  R  S  Y  S  R  S  P  R  R :   H  R  R  S  R  S  P  S  R  E  R  S  S  R  R  Y  R  S  R  S  R  S  G  S  R  S  R  T  H  S  C  S  H  S  P  S  H  S  H  S  S  S  R  S  L  S  R  S  I  S  R  S  R  S  P  R :   R  R  R  S  R  Y  *  Y  Y  R  H  E  R  V  L  A  V  G  D  I  Y  Y  *  C  I  V  V  L  V  N  L  *  L  K  L  N  L  G  *  *  C  E  V  L  F  M  S  C  V  Y  C  F  W  L  L  F  E  L  A  E  E  Y  L  A  *  Q  L  Y  Y  F  S  S  F  S  R  M  M  H  H  S  S  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0012A12.1" strand="-"/>
                <serials PGL_serial="8" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="71620" stop="71565"/>
                    <exon start="71464" stop="71417"/>
                    <exon start="71330" stop="71121"/>
                    <exon start="70890" stop="70789"/>
                    <exon start="70644" stop="70514"/>
                    <exon start="70362" stop="70224"/>
                    <exon start="67884" stop="67717"/>
                    <exon start="67644" stop="67623"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>873</number_coding_nucleotides>
                  <number_encoded_amino_acids>291</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EREAARITGSRVLHHDPYRESRRSPTYEAYSRSRRSRSRSLSYSPPHSRRYERGGKSDDIYQGKERTPKIEYITEFGGADDENKPKVEGYSPPPSPPPRTDPLSRPSTGRILEALHVDPASGVSIDKDKSGQMLKTPTSASSALSKLNKTTSSSSLSKQQGEKKETPQERLKRIMSKQLNKQIKKDTAIETAKKREQEKQRLEKLAETSRVSRYRRRSRSRSYSRSPRRHRRSRSPSRERSSRRYRSRSRSGSRSRTHSCSHSPSHSHSSSRSLSRSISRSRSPRRRRSRY*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="74201" e_stop="74144"/>
            <exon e_start="73998" e_stop="73508"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.758" acc_prob="0.740" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="74201" e_stop="74144" e_length="58"/>
          </exon>
          <intron i_serial="1" don_prob="0.758" acc_prob="0.740">
            <gDNA_intron_boundary i_start="74143" i_stop="73999" i_length="145"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="73998" e_stop="73508" e_length="491"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="74201" stop="74144"/>
              <exon start="73998" stop="73508"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U578816" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GAAGAGTTTGTTAATTTTCAGCGTTATCGGGATTTAATTAAGCATCGGCGTAGAGGAT : TTAAAGATGAAGAGGGTATGCAACATGTTAATCAGGAGATGGAGGCTAAAACCACTGCACTGCTCGGCTCTGACAGGTTTCTATTTCTGTCCTTATTTTTCACTTTAGAGCGTTTGCCTTTTAGTTGCCATTTGTTCACTCTCCCTACTCTGCAAAGAGCCGAAGATCAATAAAATAAGAGAAGGAAGAAGAAAATGTGAGAGTTTTCTATTCTCCATGGCCTTGGACCAAAGTTAAGTCTATTTAGGTTTAACCATTTGATTCAAACTTGTTGATCTCATTACTGATGTTGTGTAGCGTTCTGAATTTTGTTTGCTTTAAGTTGTGTCTACAATGTAGCAACTAGTGCTTAATATTTAATTAGTGCATAATCACTCTTTTTTTATTGTTTGAGTTGATAATCACTCATAACTCAAAGATATTAAAGAACTCTTTGAAGGAAGAGTTGCGCAGTTGGTCTTTTGAAAGAGGAAAATAATGCTTGAGGGGGT</gDNA_template>
            <first_frame> E  E  F  V  N  F  Q  R  Y  R  D  L  I  K  H  R  R  R  G   : F  K  D  E  E  G  M  Q  H  V  N  Q  E  M  E  A  K  T  T  A  L  L  G  S  D  R  F  L  F  L  S  L  F  F  T  L  E  R  L  P  F  S  C  H  L  F  T  L  P  T  L  Q  R  A  E  D  Q  *  N  K  R  R  K  K  K  M  *  E  F  S  I  L  H  G  L  G  P  K  L  S  L  F  R  F  N  H  L  I  Q  T  C  *  S  H  Y  *  C  C  V  A  F  *  I  L  F  A  L  S  C  V  Y  N  V  A  T  S  A  *  Y  L  I  S  A  *  S  L  F  F  Y  C  L  S  *  *  S  L  I  T  Q  R  Y  *  R  T  L  *  R  K  S  C  A  V  G  L  L  K  E  E  N  N  A  *  G  G </first_frame>
            <second_frame>  K  S  L  L  I  F  S  V  I  G  I  *  L  S  I  G  V  E  D  :  L  K  M  K  R  V  C  N  M  L  I  R  R  W  R  L  K  P  L  H  C  S  A  L  T  G  F  Y  F  C  P  Y  F  S  L  *  S  V  C  L  L  V  A  I  C  S  L  S  L  L  C  K  E  P  K  I  N  K  I  R  E  G  R  R  K  C  E  S  F  L  F  S  M  A  L  D  Q  S  *  V  Y  L  G  L  T  I  *  F  K  L  V  D  L  I  T  D  V  V  *  R  S  E  F  C  L  L  *  V  V  S  T  M  *  Q  L  V  L  N  I  *  L  V  H  N  H  S  F  F  I  V  *  V  D  N  H  S  *  L  K  D  I  K  E  L  F  E  G  R  V  A  Q  L  V  F  *  K  R  K  I  M  L  E  G   </second_frame>
            <third_frame>   R  V  C  *  F  S  A  L  S  G  F  N  *  A  S  A  *  R  I :   *  R  *  R  G  Y  A  T  C  *  S  G  D  G  G  *  N  H  C  T  A  R  L  *  Q  V  S  I  S  V  L  I  F  H  F  R  A  F  A  F  *  L  P  F  V  H  S  P  Y  S  A  K  S  R  R  S  I  K  *  E  K  E  E  E  N  V  R  V  F  Y  S  P  W  P  W  T  K  V  K  S  I  *  V  *  P  F  D  S  N  L  L  I  S  L  L  M  L  C  S  V  L  N  F  V  C  F  K  L  C  L  Q  C  S  N  *  C  L  I  F  N  *  C  I  I  T  L  F  L  L  F  E  L  I  I  T  H  N  S  K  I  L  K  N  S  L  K  E  E  L  R  S  W  S  F  E  R  G  K  *  C  L  R  G  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0012A12.1" strand="-"/>
                <serials PGL_serial="8" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="74201" stop="74144"/>
                    <exon start="73998" stop="73826"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>228</number_coding_nucleotides>
                  <number_encoded_amino_acids>76</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EEFVNFQRYRDLIKHRRRGFKDEEGMQHVNQEMEAKTTALLGSDRFLFLSLFFTLERLPFSCHLFTLPTLQRAEDQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="+" PGL_start="73108" PGL_stop="73286"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="73108" e_stop="73286"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.939"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.939">
            <gDNA_exon_boundary e_start="73108" e_stop="73286" e_length="179"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="73108" stop="73286"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U600950" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GATAAGGTAAAGGTTTATTGACTAAGTACCAAGAAGGTACCAAAATCAAAAGTTACAAAAAGACTGCTGGGAATATCCATACAGTCAATTACAACATCTCCCTGGCAGTTCCAAAAACTCCATATATTGATGTATATTATCAAGGAAACTACTTTAACACAAACAAAACAAATTATGTA</gDNA_template>
            <first_frame> D  K  V  K  V  Y  *  L  S  T  K  K  V  P  K  S  K  V  T  K  R  L  L  G  I  S  I  Q  S  I  T  T  S  P  W  Q  F  Q  K  L  H  I  L  M  Y  I  I  K  E  T  T  L  T  Q  T  K  Q  I  M   </first_frame>
            <second_frame>  I  R  *  R  F  I  D  *  V  P  R  R  Y  Q  N  Q  K  L  Q  K  D  C  W  E  Y  P  Y  S  Q  L  Q  H  L  P  G  S  S  K  N  S  I  Y  *  C  I  L  S  R  K  L  L  *  H  K  Q  N  K  L  C  </second_frame>
            <third_frame>   *  G  K  G  L  L  T  K  Y  Q  E  G  T  K  I  K  S  Y  K  K  T  A  G  N  I  H  T  V  N  Y  N  I  S  L  A  V  P  K  T  P  Y  I  D  V  Y  Y  Q  G  N  Y  F  N  T  N  K  T  N  Y  V </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0012A12.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="+" PGL_start="81232" PGL_stop="82623"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="81232" e_stop="81249"/>
            <exon e_start="81421" e_stop="81900"/>
            <exon e_start="82149" e_stop="82623"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.722"/>
          <exon-intron don_prob="1.000" acc_prob="0.979" e_score="1.000"/>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.722">
            <gDNA_exon_boundary e_start="81232" e_stop="81249" e_length="18"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="81250" i_stop="81420" i_length="171"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="81421" e_stop="81900" e_length="480"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="0.979">
            <gDNA_intron_boundary i_start="81901" i_stop="82148" i_length="248"/>
          </intron>
          <exon e_serial="3" e_score="0.996">
            <gDNA_exon_boundary e_start="82149" e_stop="82623" e_length="475"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81232" stop="81249"/>
              <exon start="81421" stop="81900"/>
              <exon start="82149" stop="82623"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U563827" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCGCCAAGTCTACACGAG : TATAACCTAGACGCCCGAGCCATCGGAGCTCCCCTCCACCCTCTCATAGGGGTTGGGTTGGTCGGGCTCTTTCCATGTCACACCCCACCGCAGCTCCGCTATCAGGACCACGCCTCTCACAACCCTCGTCGTCGGCGATGTCTCCCTTGTACAAACAGAAATCTTGGTCACCGGACACGTTTCGCGACGAGGCGTGGCAGCGGCGGAAGGGTACCCACGGAAGCTGCCTCAAACGGCGGAGCAAGAGCGTTACCGATGAGGACTTTGATGAGATTAAGGCCTGTATCGAATTAGGGTTTGGATTTGATTCGCCAGAAATGGATCAGCGATTGTCTGATACTTTTCCGGCGTATGACCTGTTTTACGCCGTGAATAAACAATACACCGACACTCTTTCAAAGACTTCCTCTGTATCATCGGTCATCTCCAATTGCGAGTCAACCCTTCCTCCCGTCAGTCCCCACACCATTGTCTTTCCAG : GAGATAATCCACAGGCAGTGAAGACAAGGTTGCGGCAATGGGCACAGGTGGTTGCGTGTGTGGTGCGTCAATCTTCGTATTAATGGAAGCTGCATATATTGAATGAATAAGAAGATGATGGTAATTTGTTGTGTACCAGTACTATTGTTTTTCAGGGCAAAAAAGATTAACTCATACTTAATTTGAAAAAGTAATTATAGTTAAGATTGATTGAATATCAACCTATTCAATCTTGGCGACTAATAGTCTGTTGATATGATTTTTATTAGTATGATGATTGTGTTGCAACCACATATACAGCTGGTCCATCTTAATTAATTGCTAGTAGCTTTGTTTGTTGATATTTCCATCATTTGTAACATCATCCAGCAAGTGGGACATGACTTGTTCTTCTTTAATTTGAAAGACTCACTTTTCTCTTTGGAATGCTTTGTTCTTTTGCCTAGATTGTCTTGTGCACTAAGAAAATATCAAA</gDNA_template>
            <first_frame> S  P  S  L  H  E  :  Y  N  L  D  A  R  A  I  G  A  P  L  H  P  L  I  G  V  G  L  V  G  L  F  P  C  H  T  P  P  Q  L  R  Y  Q  D  H  A  S  H  N  P  R  R  R  R  C  L  P  C  T  N  R  N  L  G  H  R  T  R  F  A  T  R  R  G  S  G  G  R  V  P  T  E  A  A  S  N  G  G  A  R  A  L  P  M  R  T  L  M  R  L  R  P  V  S  N  *  G  L  D  L  I  R  Q  K  W  I  S  D  C  L  I  L  F  R  R  M  T  C  F  T  P  *  I  N  N  T  P  T  L  F  Q  R  L  P  L  Y  H  R  S  S  P  I  A  S  Q  P  F  L  P  S  V  P  T  P  L  S  F  Q  :  E  I  I  H  R  Q  *  R  Q  G  C  G  N  G  H  R  W  L  R  V  W  C  V  N  L  R  I  N  G  S  C  I  Y  *  M  N  K  K  M  M  V  I  C  C  V  P  V  L  L  F  F  R  A  K  K  I  N  S  Y  L  I  *  K  S  N  Y  S  *  D  *  L  N  I  N  L  F  N  L  G  D  *  *  S  V  D  M  I  F  I  S  M  M  I  V  L  Q  P  H  I  Q  L  V  H  L  N  *  L  L  V  A  L  F  V  D  I  S  I  I  C  N  I  I  Q  Q  V  G  H  D  L  F  F  F  N  L  K  D  S  L  F  S  L  E  C  F  V  L  L  P  R  L  S  C  A  L  R  K  Y  Q  </first_frame>
            <second_frame>  R  Q  V  Y  T  S :   I  T  *  T  P  E  P  S  E  L  P  S  T  L  S  *  G  L  G  W  S  G  S  F  H  V  T  P  H  R  S  S  A  I  R  T  T  P  L  T  T  L  V  V  G  D  V  S  L  V  Q  T  E  I  L  V  T  G  H  V  S  R  R  G  V  A  A  A  E  G  Y  P  R  K  L  P  Q  T  A  E  Q  E  R  Y  R  *  G  L  *  *  D  *  G  L  Y  R  I  R  V  W  I  *  F  A  R  N  G  S  A  I  V  *  Y  F  S  G  V  *  P  V  L  R  R  E  *  T  I  H  R  H  S  F  K  D  F  L  C  I  I  G  H  L  Q  L  R  V  N  P  S  S  R  Q  S  P  H  H  C  L  S  R :   R  *  S  T  G  S  E  D  K  V  A  A  M  G  T  G  G  C  V  C  G  A  S  I  F  V  L  M  E  A  A  Y  I  E  *  I  R  R  *  W  *  F  V  V  Y  Q  Y  Y  C  F  S  G  Q  K  R  L  T  H  T  *  F  E  K  V  I  I  V  K  I  D  *  I  S  T  Y  S  I  L  A  T  N  S  L  L  I  *  F  L  L  V  *  *  L  C  C  N  H  I  Y  S  W  S  I  L  I  N  C  *  *  L  C  L  L  I  F  P  S  F  V  T  S  S  S  K  W  D  M  T  C  S  S  L  I  *  K  T  H  F  S  L  W  N  A  L  F  F  C  L  D  C  L  V  H  *  E  N  I  K </second_frame>
            <third_frame>   A  K  S  T  R   : V  *  P  R  R  P  S  H  R  S  S  P  P  P  S  H  R  G  W  V  G  R  A  L  S  M  S  H  P  T  A  A  P  L  S  G  P  R  L  S  Q  P  S  S  S  A  M  S  P  L  Y  K  Q  K  S  W  S  P  D  T  F  R  D  E  A  W  Q  R  R  K  G  T  H  G  S  C  L  K  R  R  S  K  S  V  T  D  E  D  F  D  E  I  K  A  C  I  E  L  G  F  G  F  D  S  P  E  M  D  Q  R  L  S  D  T  F  P  A  Y  D  L  F  Y  A  V  N  K  Q  Y  T  D  T  L  S  K  T  S  S  V  S  S  V  I  S  N  C  E  S  T  L  P  P  V  S  P  H  T  I  V  F  P   : G  D  N  P  Q  A  V  K  T  R  L  R  Q  W  A  Q  V  V  A  C  V  V  R  Q  S  S  Y  *  W  K  L  H  I  L  N  E  *  E  D  D  G  N  L  L  C  T  S  T  I  V  F  Q  G  K  K  D  *  L  I  L  N  L  K  K  *  L  *  L  R  L  I  E  Y  Q  P  I  Q  S  W  R  L  I  V  C  *  Y  D  F  Y  *  Y  D  D  C  V  A  T  T  Y  T  A  G  P  S  *  L  I  A  S  S  F  V  C  *  Y  F  H  H  L  *  H  H  P  A  S  G  T  *  L  V  L  L  *  F  E  R  L  T  F  L  F  G  M  L  C  S  F  A  *  I  V  L  C  T  K  K  I  S   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0012A12.1" strand="+"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="81426" stop="81900"/>
                    <exon start="82149" stop="82231"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>555</number_coding_nucleotides>
                  <number_encoded_amino_acids>185</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PRRPSHRSSPPPSHRGWVGRALSMSHPTAAPLSGPRLSQPSSSAMSPLYKQKSWSPDTFRDEAWQRRKGTHGSCLKRRSKSVTDEDFDEIKACIELGFGFDSPEMDQRLSDTFPAYDLFYAVNKQYTDTLSKTSSVSSVISNCESTLPPVSPHTIVFPGDNPQAVKTRLRQWAQVVACVVRQSSY*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="81435" e_stop="82175"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.996">
            <gDNA_exon_boundary e_start="81435" e_stop="82175" e_length="741"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81435" stop="82175"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U595227" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CCGAGCCATCGGAGCTCCCCTCCACCCTCTCATAGGGGTTGGGTTGGTCGGGCTCTTTCCATGTCACACCCCACCGCAGCTCCGCTATCAGGACCACGCCTCTCACAACCCTCGTCGTCGGCGATGTCTCCCTTGTACAAACAGAAATCTTGGTCACCGGACACGTTTCGCGACGAGGCGTGGCAGCGGCGGAAGGGTACCCACGGAAGCTGCCTCAAACGGCGGAGCAAGAGCGTTACCGATGAGGACTTTGATGAGATTAAGGCCTGTATCGAATTAGGGTTTGGATTTGATTCGCCAGAAATGGATCAGCGATTGTCTGATACTTTTCCGGCGTATGACCTGTTTTACGCCGTGAATAAACAATACACCGACACTCTTTCAAAGACTTCCTCTGTATCATCGGTCATCTCCAATTGCGAGTCAACCCTTCCTCCCGTCAGTCCCCACACCATTGTCTTTCCAGGTAAATTCTAAAAACCTTCATTATTTCAAAATCATTACATCAGAATGTTCAACACAAATTCCATTCCTATTCAACTTTCGTAAATTCGTTTACATTTTGACATGAGGTTACCTTTCGATTACAGAAAATTCCTGAGTTTGTTAATTTTCCTTATTGAGTTGAATAGCAATGCATAATTTTATTCTTGATAAGGTTCAGAAAATTGAACGTATGGTTGCTAATATTTGAAAAAAAAAAAATGAATGTAGGAGATAATCCACAGGCAGTGAAGACAA</gDNA_template>
            <first_frame> P  S  H  R  S  S  P  P  P  S  H  R  G  W  V  G  R  A  L  S  M  S  H  P  T  A  A  P  L  S  G  P  R  L  S  Q  P  S  S  S  A  M  S  P  L  Y  K  Q  K  S  W  S  P  D  T  F  R  D  E  A  W  Q  R  R  K  G  T  H  G  S  C  L  K  R  R  S  K  S  V  T  D  E  D  F  D  E  I  K  A  C  I  E  L  G  F  G  F  D  S  P  E  M  D  Q  R  L  S  D  T  F  P  A  Y  D  L  F  Y  A  V  N  K  Q  Y  T  D  T  L  S  K  T  S  S  V  S  S  V  I  S  N  C  E  S  T  L  P  P  V  S  P  H  T  I  V  F  P  G  K  F  *  K  P  S  L  F  Q  N  H  Y  I  R  M  F  N  T  N  S  I  P  I  Q  L  S  *  I  R  L  H  F  D  M  R  L  P  F  D  Y  R  K  F  L  S  L  L  I  F  L  I  E  L  N  S  N  A  *  F  Y  S  *  *  G  S  E  N  *  T  Y  G  C  *  Y  L  K  K  K  K  *  M  *  E  I  I  H  R  Q  *  R  Q </first_frame>
            <second_frame>  R  A  I  G  A  P  L  H  P  L  I  G  V  G  L  V  G  L  F  P  C  H  T  P  P  Q  L  R  Y  Q  D  H  A  S  H  N  P  R  R  R  R  C  L  P  C  T  N  R  N  L  G  H  R  T  R  F  A  T  R  R  G  S  G  G  R  V  P  T  E  A  A  S  N  G  G  A  R  A  L  P  M  R  T  L  M  R  L  R  P  V  S  N  *  G  L  D  L  I  R  Q  K  W  I  S  D  C  L  I  L  F  R  R  M  T  C  F  T  P  *  I  N  N  T  P  T  L  F  Q  R  L  P  L  Y  H  R  S  S  P  I  A  S  Q  P  F  L  P  S  V  P  T  P  L  S  F  Q  V  N  S  K  N  L  H  Y  F  K  I  I  T  S  E  C  S  T  Q  I  P  F  L  F  N  F  R  K  F  V  Y  I  L  T  *  G  Y  L  S  I  T  E  N  S  *  V  C  *  F  S  L  L  S  *  I  A  M  H  N  F  I  L  D  K  V  Q  K  I  E  R  M  V  A  N  I  *  K  K  K  N  E  C  R  R  *  S  T  G  S  E  D   </second_frame>
            <third_frame>   E  P  S  E  L  P  S  T  L  S  *  G  L  G  W  S  G  S  F  H  V  T  P  H  R  S  S  A  I  R  T  T  P  L  T  T  L  V  V  G  D  V  S  L  V  Q  T  E  I  L  V  T  G  H  V  S  R  R  G  V  A  A  A  E  G  Y  P  R  K  L  P  Q  T  A  E  Q  E  R  Y  R  *  G  L  *  *  D  *  G  L  Y  R  I  R  V  W  I  *  F  A  R  N  G  S  A  I  V  *  Y  F  S  G  V  *  P  V  L  R  R  E  *  T  I  H  R  H  S  F  K  D  F  L  C  I  I  G  H  L  Q  L  R  V  N  P  S  S  R  Q  S  P  H  H  C  L  S  R  *  I  L  K  T  F  I  I  S  K  S  L  H  Q  N  V  Q  H  K  F  H  S  Y  S  T  F  V  N  S  F  T  F  *  H  E  V  T  F  R  L  Q  K  I  P  E  F  V  N  F  P  Y  *  V  E  *  Q  C  I  I  L  F  L  I  R  F  R  K  L  N  V  W  L  L  I  F  E  K  K  K  M  N  V  G  D  N  P  Q  A  V  K  T  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0012A12.1" strand="+"/>
                <serials PGL_serial="10" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="81435" stop="81911"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>474</number_coding_nucleotides>
                  <number_encoded_amino_acids>158</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PSHRSSPPPSHRGWVGRALSMSHPTAAPLSGPRLSQPSSSAMSPLYKQKSWSPDTFRDEAWQRRKGTHGSCLKRRSKSVTDEDFDEIKACIELGFGFDSPEMDQRLSDTFPAYDLFYAVNKQYTDTLSKTSSVSSVISNCESTLPPVSPHTIVFPGKF*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="+" PGL_start="90376" PGL_stop="93659"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="90376" e_stop="91010"/>
            <exon e_start="92658" e_stop="93659"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.996" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="0.995"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="90376" e_stop="91010" e_length="635"/>
          </exon>
          <intron i_serial="1" don_prob="0.996" acc_prob="0.999">
            <gDNA_intron_boundary i_start="91011" i_stop="92657" i_length="1647"/>
          </intron>
          <exon e_serial="2" e_score="0.995">
            <gDNA_exon_boundary e_start="92658" e_stop="93659" e_length="1002"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90376" stop="91010"/>
              <exon start="92658" stop="93639"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U566892" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="93486" stop="93659"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U595243" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTTACTCTTCGAAAAGTCTTCTAAATATTTCTAGAACCTCTTACTAGATTAAATTTGCTTTTCTCATTCTTTTAATCTCTCATCCATTTTCAAAACCTTGAAGGATAAGAGAGAGAAAACAAATCAAGTTTTTTTAGAGCAAGAAAAGATAGTTATGGTCGTGTTGTTGTTGGTGAAGATTGGCAAAGTTGTAGCCAATGGAAGATTCTAAGATTATCATCAATCGTCCTAAAAATAATCTTGTTCATTCTCTAGTCTTTCTTTTCGGTTTCTATTGTTGGGATTGGGAATTTCTTACTGCCCTTTTGCTTTTCAGTTATTGCTCCTTCTAATTAATTTCTTTTAAATTTGTAAAATTCTTATAGGATCTTGTCAATTAATAAGTAAAATCCCCAAAAGGGGAAATTTGGGTAGATTTAGAGAAAGAGGGGATGTCGCAAAGAACAGCGCCGGCGCCGTTTCTGTTGAAGACGTATCAGTTGGTGGATGATGCGACCACTGACGATGTCATATCTTGGAATGAAATCGGCACAACCTTTGTGGTGTGGAAAACTGCTGAATTTGCAAAGGATTTGCTTCCCAAATACTTCAAGCACAATAATTTCTCCAGCTTCGTTCGACAGCTTAACACCTAT : GGTTTTCGAAAGATTGTGCCTGACAAATGGGAATTCGCCAATGAGAATTTCAAAAGAGGACAGAAAGAGCTCCTCACAGCTATACGCCGTCGGAAGACCGTGACATCAATCCCAGCTGGTGGAAAGTCTGTGGCAGCCGGGACTTCAGCATCTCCGGACAATTCTGGGGATGACATAGGTTCAAGTTCTACCTCGTCCCCAGACTCCAAGAACCCGGGATCTGTGGACACTCCGGGAAAGTTGTCCCAGTTCACGGACTTGTCGGATGAGAATGAGAAGCTAAAGAAAGACAACCAGATGCTGAGCTCAGAGCTGGTGCAGGCGAAGAAACAATGCAATGAGTTGGTTGCTTTCTTGAGCCAGTACGTGAAGGTTGCACCCGATATGATCAACCGTATCATGAGCCAAGGAACCCCATCGGGGTCCAGCCTTGAAGAGTTGGTCAAGGAGGTTGGTGGTGTTAAAGATTTAGAAGAACAGGGTAGTTATAATGACAACGATGATAAAGAAGACGATGACGAAAAGGGTGATACTCTGAAACTATTTGGTGTGTTGCTGAAAGAAAAGAAGAAGAAAAGGGGCCCGGATGATAATATTGAGACTTGTGGTGGACGTGGTAAAATGATGAAAACTGTGGACTATAATGGTCCTTGGATGAAAATGTCTTCGACGGCCGGAGAAAGCAGCAAGGTTTGTAACTGAGGTGAAGTTGGTGAATTATGTGTTGAGGTTGGAGCAGAGTAAATTAGCTTCTCCCTTTTGATTTAGTAATTTCCTTTGGATTTACAAGTTCGATGTTTATGAATAAAATAAATAGAGAATTTAATTAGTATGAGTAGTAAAAAGGGTTTAGATTACTACTAAGAGTAGTACACCCAAAACCAACTAGAAATTATATATATATAGTACATGCAGACTGCTATTAAGTCAAATGCAACTCAAGTTTGCTTTGTCTAGTCAGAAACTTATAATAATAATAATAATATTGGTTCTTGATTTGTG</gDNA_template>
            <first_frame> V  T  L  R  K  V  F  *  I  F  L  E  P  L  T  R  L  N  L  L  F  S  F  F  *  S  L  I  H  F  Q  N  L  E  G  *  E  R  E  N  K  S  S  F  F  R  A  R  K  D  S  Y  G  R  V  V  V  G  E  D  W  Q  S  C  S  Q  W  K  I  L  R  L  S  S  I  V  L  K  I  I  L  F  I  L  *  S  F  F  S  V  S  I  V  G  I  G  N  F  L  L  P  F  C  F  S  V  I  A  P  S  N  *  F  L  L  N  L  *  N  S  Y  R  I  L  S  I  N  K  *  N  P  Q  K  G  K  F  G  *  I  *  R  K  R  G  C  R  K  E  Q  R  R  R  R  F  C  *  R  R  I  S  W  W  M  M  R  P  L  T  M  S  Y  L  G  M  K  S  A  Q  P  L  W  C  G  K  L  L  N  L  Q  R  I  C  F  P  N  T  S  S  T  I  I  S  P  A  S  F  D  S  L  T  P  M :   V  F  E  R  L  C  L  T  N  G  N  S  P  M  R  I  S  K  E  D  R  K  S  S  S  Q  L  Y  A  V  G  R  P  *  H  Q  S  Q  L  V  E  S  L  W  Q  P  G  L  Q  H  L  R  T  I  L  G  M  T  *  V  Q  V  L  P  R  P  Q  T  P  R  T  R  D  L  W  T  L  R  E  S  C  P  S  S  R  T  C  R  M  R  M  R  S  *  R  K  T  T  R  C  *  A  Q  S  W  C  R  R  R  N  N  A  M  S  W  L  L  S  *  A  S  T  *  R  L  H  P  I  *  S  T  V  S  *  A  K  E  P  H  R  G  P  A  L  K  S  W  S  R  R  L  V  V  L  K  I  *  K  N  R  V  V  I  M  T  T  M  I  K  K  T  M  T  K  R  V  I  L  *  N  Y  L  V  C  C  *  K  K  R  R  R  K  G  A  R  M  I  I  L  R  L  V  V  D  V  V  K  *  *  K  L  W  T  I  M  V  L  G  *  K  C  L  R  R  P  E  K  A  A  R  F  V  T  E  V  K  L  V  N  Y  V  L  R  L  E  Q  S  K  L  A  S  P  F  *  F  S  N  F  L  W  I  Y  K  F  D  V  Y  E  *  N  K  *  R  I  *  L  V  *  V  V  K  R  V  *  I  T  T  K  S  S  T  P  K  T  N  *  K  L  Y  I  Y  S  T  C  R  L  L  L  S  Q  M  Q  L  K  F  A  L  S  S  Q  K  L  I  I  I  I  I  I  L  V  L  D  L   </first_frame>
            <second_frame>  L  L  F  E  K  S  S  K  Y  F  *  N  L  L  L  D  *  I  C  F  S  H  S  F  N  L  S  S  I  F  K  T  L  K  D  K  R  E  K  T  N  Q  V  F  L  E  Q  E  K  I  V  M  V  V  L  L  L  V  K  I  G  K  V  V  A  N  G  R  F  *  D  Y  H  Q  S  S  *  K  *  S  C  S  F  S  S  L  S  F  R  F  L  L  L  G  L  G  I  S  Y  C  P  F  A  F  Q  L  L  L  L  L  I  N  F  F  *  I  C  K  I  L  I  G  S  C  Q  L  I  S  K  I  P  K  R  G  N  L  G  R  F  R  E  R  G  D  V  A  K  N  S  A  G  A  V  S  V  E  D  V  S  V  G  G  *  C  D  H  *  R  C  H  I  L  E  *  N  R  H  N  L  C  G  V  E  N  C  *  I  C  K  G  F  A  S  Q  I  L  Q  A  Q  *  F  L  Q  L  R  S  T  A  *  H  L   : W  F  S  K  D  C  A  *  Q  M  G  I  R  Q  *  E  F  Q  K  R  T  E  R  A  P  H  S  Y  T  P  S  E  D  R  D  I  N  P  S  W  W  K  V  C  G  S  R  D  F  S  I  S  G  Q  F  W  G  *  H  R  F  K  F  Y  L  V  P  R  L  Q  E  P  G  I  C  G  H  S  G  K  V  V  P  V  H  G  L  V  G  *  E  *  E  A  K  E  R  Q  P  D  A  E  L  R  A  G  A  G  E  E  T  M  Q  *  V  G  C  F  L  E  P  V  R  E  G  C  T  R  Y  D  Q  P  Y  H  E  P  R  N  P  I  G  V  Q  P  *  R  V  G  Q  G  G  W  W  C  *  R  F  R  R  T  G  *  L  *  *  Q  R  *  *  R  R  R  *  R  K  G  *  Y  S  E  T  I  W  C  V  A  E  R  K  E  E  E  K  G  P  G  *  *  Y  *  D  L  W  W  T  W  *  N  D  E  N  C  G  L  *  W  S  L  D  E  N  V  F  D  G  R  R  K  Q  Q  G  L  *  L  R  *  S  W  *  I  M  C  *  G  W  S  R  V  N  *  L  L  P  F  D  L  V  I  S  F  G  F  T  S  S  M  F  M  N  K  I  N  R  E  F  N  *  Y  E  *  *  K  G  F  R  L  L  L  R  V  V  H  P  K  P  T  R  N  Y  I  Y  I  V  H  A  D  C  Y  *  V  K  C  N  S  S  L  L  C  L  V  R  N  L  *  *  *  *  *  Y  W  F  L  I  C  </second_frame>
            <third_frame>   Y  S  S  K  S  L  L  N  I  S  R  T  S  Y  *  I  K  F  A  F  L  I  L  L  I  S  H  P  F  S  K  P  *  R  I  R  E  R  K  Q  I  K  F  F  *  S  K  K  R  *  L  W  S  C  C  C  W  *  R  L  A  K  L  *  P  M  E  D  S  K  I  I  I  N  R  P  K  N  N  L  V  H  S  L  V  F  L  F  G  F  Y  C  W  D  W  E  F  L  T  A  L  L  L  F  S  Y  C  S  F  *  L  I  S  F  K  F  V  K  F  L  *  D  L  V  N  *  *  V  K  S  P  K  G  E  I  W  V  D  L  E  K  E  G  M  S  Q  R  T  A  P  A  P  F  L  L  K  T  Y  Q  L  V  D  D  A  T  T  D  D  V  I  S  W  N  E  I  G  T  T  F  V  V  W  K  T  A  E  F  A  K  D  L  L  P  K  Y  F  K  H  N  N  F  S  S  F  V  R  Q  L  N  T  Y  :  G  F  R  K  I  V  P  D  K  W  E  F  A  N  E  N  F  K  R  G  Q  K  E  L  L  T  A  I  R  R  R  K  T  V  T  S  I  P  A  G  G  K  S  V  A  A  G  T  S  A  S  P  D  N  S  G  D  D  I  G  S  S  S  T  S  S  P  D  S  K  N  P  G  S  V  D  T  P  G  K  L  S  Q  F  T  D  L  S  D  E  N  E  K  L  K  K  D  N  Q  M  L  S  S  E  L  V  Q  A  K  K  Q  C  N  E  L  V  A  F  L  S  Q  Y  V  K  V  A  P  D  M  I  N  R  I  M  S  Q  G  T  P  S  G  S  S  L  E  E  L  V  K  E  V  G  G  V  K  D  L  E  E  Q  G  S  Y  N  D  N  D  D  K  E  D  D  D  E  K  G  D  T  L  K  L  F  G  V  L  L  K  E  K  K  K  K  R  G  P  D  D  N  I  E  T  C  G  G  R  G  K  M  M  K  T  V  D  Y  N  G  P  W  M  K  M  S  S  T  A  G  E  S  S  K  V  C  N  *  G  E  V  G  E  L  C  V  E  V  G  A  E  *  I  S  F  S  L  L  I  *  *  F  P  L  D  L  Q  V  R  C  L  *  I  K  *  I  E  N  L  I  S  M  S  S  K  K  G  L  D  Y  Y  *  E  *  Y  T  Q  N  Q  L  E  I  I  Y  I  *  Y  M  Q  T  A  I  K  S  N  A  T  Q  V  C  F  V  *  S  E  T  Y  N  N  N  N  N  I  G  S  *  F  V </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0012A12.1" strand="+"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="90759" stop="91010"/>
                    <exon start="92658" stop="93359"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>951</number_coding_nucleotides>
                  <number_encoded_amino_acids>317</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VKSPKGEIWVDLEKEGMSQRTAPAPFLLKTYQLVDDATTDDVISWNEIGTTFVVWKTAEFAKDLLPKYFKHNNFSSFVRQLNTYGFRKIVPDKWEFANENFKRGQKELLTAIRRRKTVTSIPAGGKSVAAGTSASPDNSGDDIGSSSTSSPDSKNPGSVDTPGKLSQFTDLSDENEKLKKDNQMLSSELVQAKKQCNELVAFLSQYVKVAPDMINRIMSQGTPSGSSLEELVKEVGGVKDLEEQGSYNDNDDKEDDDEKGDTLKLFGVLLKEKKKKRGPDDNIETCGGRGKMMKTVDYNGPWMKMSSTAGESSKVCN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="+" PGL_start="95400" PGL_stop="97583"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="95400" e_stop="95425"/>
            <exon e_start="96518" e_stop="96635"/>
            <exon e_start="96730" e_stop="96766"/>
            <exon e_start="96833" e_stop="96860"/>
            <exon e_start="96951" e_stop="97103"/>
            <exon e_start="97186" e_stop="97288"/>
            <exon e_start="97377" e_stop="97583"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.990" acc_prob="0.998" e_score="0.962"/>
          <exon-intron don_prob="0.999" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.990" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.957" acc_prob="0.971" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.998" e_score="1.000"/>
          <exon-only e_score="0.995"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.962">
            <gDNA_exon_boundary e_start="95400" e_stop="95425" e_length="26"/>
          </exon>
          <intron i_serial="1" don_prob="0.990" acc_prob="0.998">
            <gDNA_intron_boundary i_start="95426" i_stop="96517" i_length="1092"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="96518" e_stop="96635" e_length="118"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.997">
            <gDNA_intron_boundary i_start="96636" i_stop="96729" i_length="94"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="96730" e_stop="96766" e_length="37"/>
          </exon>
          <intron i_serial="3" don_prob="0.990" acc_prob="0.999">
            <gDNA_intron_boundary i_start="96767" i_stop="96832" i_length="66"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="96833" e_stop="96860" e_length="28"/>
          </exon>
          <intron i_serial="4" don_prob="0.998" acc_prob="0.999">
            <gDNA_intron_boundary i_start="96861" i_stop="96950" i_length="90"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="96951" e_stop="97103" e_length="153"/>
          </exon>
          <intron i_serial="5" don_prob="0.957" acc_prob="0.971">
            <gDNA_intron_boundary i_start="97104" i_stop="97185" i_length="82"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="97186" e_stop="97288" e_length="103"/>
          </exon>
          <intron i_serial="6" don_prob="0.994" acc_prob="0.998">
            <gDNA_intron_boundary i_start="97289" i_stop="97376" i_length="88"/>
          </intron>
          <exon e_serial="7" e_score="0.995">
            <gDNA_exon_boundary e_start="97377" e_stop="97583" e_length="207"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="95400" stop="95425"/>
              <exon start="96518" stop="96635"/>
              <exon start="96730" stop="96766"/>
              <exon start="96833" stop="96860"/>
              <exon start="96951" stop="97103"/>
              <exon start="97186" stop="97288"/>
              <exon start="97377" stop="97583"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U568666" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ACACAGATTTCCCAATATAAATTATG : GCAAGCGTAAGTAGAAAGATGTCAAGAAAGGAGACTAGAAACCGTCATCCTGGGCTTACACAGCAGAAAAGGCAAGAGATCAAAGAAGCATTCGAGCTCTTTGACACCGATGGCTCTG : GAACTATTGATGCCAGTGAGCTGAATGTTGCTATGAG : GGCCCTTGGATTTGAAATGACAGAGGAG : CAAGTTGAGCAAATGATTGCTGATGTCGACAAGGATGGTAGTGGTGCAATTGATTTTGATGAATTTGTACACATGATGACGGCCAAGATAGGGGAGAGGGACACTAAAGAGGATCTCGCGAAAGCATTTAACATACTAGATCAAGATAAAAAT : GGGAAAATATCTGCTGCTGATATTCAGCAAATTGCAAAGGAGTTGGGTGAAAATTTCAGCGCAAAAGAAATACAAGAGATGATAGAGGCAGCAGATCGTGATC : GTGATGGAGAAGTAAGTGCGGAAGAGTTTATGAGGATGATGAGGAAAACCAGCTTCGCAAACTAGTAGTACAAAACCATATTATTTGTCAAGTTTAAAAAGCTTCTTTTTTTTTTACAAGTTGCTTGTCCTTCTCTTTTTCACTTTTCATATCTATGTACTCTCTTGTATTGTGTATATGTATATAATATATCCACATATATATTAT</gDNA_template>
            <first_frame> T  Q  I  S  Q  Y  K  L  W :   Q  A  *  V  E  R  C  Q  E  R  R  L  E  T  V  I  L  G  L  H  S  R  K  G  K  R  S  K  K  H  S  S  S  L  T  P  M  A  L  :  E  L  L  M  P  V  S  *  M  L  L  *   : G  P  L  D  L  K  *  Q  R  S :   K  L  S  K  *  L  L  M  S  T  R  M  V  V  V  Q  L  I  L  M  N  L  Y  T  *  *  R  P  R  *  G  R  G  T  L  K  R  I  S  R  K  H  L  T  Y  *  I  K  I  K  M :   G  K  Y  L  L  L  I  F  S  K  L  Q  R  S  W  V  K  I  S  A  Q  K  K  Y  K  R  *  *  R  Q  Q  I  V  I  :  V  M  E  K  *  V  R  K  S  L  *  G  *  *  G  K  P  A  S  Q  T  S  S  T  K  P  Y  Y  L  S  S  L  K  S  F  F  F  F  Y  K  L  L  V  L  L  F  F  T  F  H  I  Y  V  L  S  C  I  V  Y  M  Y  I  I  Y  P  H  I  Y  Y </first_frame>
            <second_frame>  H  R  F  P  N  I  N  Y   : G  K  R  K  *  K  D  V  K  K  G  D  *  K  P  S  S  W  A  Y  T  A  E  K  A  R  D  Q  R  S  I  R  A  L  *  H  R  W  L  W :   N  Y  *  C  Q  *  A  E  C  C  Y  E  :  G  P  W  I  *  N  D  R  G   : A  S  *  A  N  D  C  *  C  R  Q  G  W  *  W  C  N  *  F  *  *  I  C  T  H  D  D  G  Q  D  R  G  E  G  H  *  R  G  S  R  E  S  I  *  H  T  R  S  R  *  K   : W  E  N  I  C  C  *  Y  S  A  N  C  K  G  V  G  *  K  F  Q  R  K  R  N  T  R  D  D  R  G  S  R  S  *  S :   *  W  R  S  K  C  G  R  V  Y  E  D  D  E  E  N  Q  L  R  K  L  V  V  Q  N  H  I  I  C  Q  V  *  K  A  S  F  F  F  T  S  C  L  S  F  S  F  S  L  F  I  S  M  Y  S  L  V  L  C  I  C  I  *  Y  I  H  I  Y  I   </second_frame>
            <third_frame>   T  D  F  P  I  *  I  M  :  A  S  V  S  R  K  M  S  R  K  E  T  R  N  R  H  P  G  L  T  Q  Q  K  R  Q  E  I  K  E  A  F  E  L  F  D  T  D  G  S   : G  T  I  D  A  S  E  L  N  V  A  M  R :   A  L  G  F  E  M  T  E  E  :  Q  V  E  Q  M  I  A  D  V  D  K  D  G  S  G  A  I  D  F  D  E  F  V  H  M  M  T  A  K  I  G  E  R  D  T  K  E  D  L  A  K  A  F  N  I  L  D  Q  D  K  N  :  G  K  I  S  A  A  D  I  Q  Q  I  A  K  E  L  G  E  N  F  S  A  K  E  I  Q  E  M  I  E  A  A  D  R  D   : R  D  G  E  V  S  A  E  E  F  M  R  M  M  R  K  T  S  F  A  N  *  *  Y  K  T  I  L  F  V  K  F  K  K  L  L  F  F  L  Q  V  A  C  P  S  L  F  H  F  S  Y  L  C  T  L  L  Y  C  V  Y  V  Y  N  I  S  T  Y  I  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0012A12.1" strand="+"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="95420" stop="95425"/>
                    <exon start="96518" stop="96635"/>
                    <exon start="96730" stop="96766"/>
                    <exon start="96833" stop="96860"/>
                    <exon start="96951" stop="97103"/>
                    <exon start="97186" stop="97288"/>
                    <exon start="97377" stop="97441"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>507</number_coding_nucleotides>
                  <number_encoded_amino_acids>169</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IMASVSRKMSRKETRNRHPGLTQQKRQEIKEAFELFDTDGSGTIDASELNVAMRALGFEMTEEQVEQMIADVDKDGSGAIDFDEFVHMMTAKIGERDTKEDLAKAFNILDQDKNGKISAADIQQIAKELGENFSAKEIQEMIEAADRDRDGEVSAEEFMRMMRKTSFAN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="+" PGL_start="115895" PGL_stop="116686"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="115895" e_stop="116686"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.971"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.971">
            <gDNA_exon_boundary e_start="115895" e_stop="116686" e_length="792"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="115895" stop="116686"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U597983" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTTGATTATTATTTTCATTTACAACAACAAACAAACGAGTAATTTCATTTTTTCAATTATAGAACTAGAAAGGGGAAATAATGGATAATTTATCTAGCTTTACTCACAAACTGACTCATCAACAAGAATCTCACTACATGGTGTCAGCTCTCAAACATGTTTTCTCTGGAGCCGCCGTTGATGGTCGAGCCGACGGAGAAGCTGCTCAGCTTTTATGGGAAGTTGAAAATGCAGCCACGTCAGATAATTCAATGCCACGTAGGAGTATCAATGTTCACCCAGTACACGTGGAGTTGGAGTTGGGGAAGAAGAAGCAGAGGAGGAGGAGGAATACGAAGAAGGAATTTAGGGGAGTGAGACAAAGACCATGGGGAAAATGGGCCGCCGAGATCCGTGACCCGCATAAAGCCCAACGACTTTGGCTTGGTACGTTTGTTACTGCTGAAGATGCTGCTAGAGCTTATGACAAAAAAGCCGTAGAGTTTAGAGGGAATAAGGCAAAAACAAACTTTCCTCTTAAGGAATATATTGATGATCACGACAACAGTTCCCCAATGATGAAAGTGGAAGAACATGAAAATGACCAAAATGTGATGAATGGTGATGAGAATAATAATAATGGTGATGACTTTTGGGCCACATTGGAAGATGATAGACTTGTCAAATTTATCACGCAGGATATGTCCCACTGATCCTTAATAATTTCTACTATTATAATGTTTTTTGTCTTACCTGAAAAATATCTTCTTCTTGTTTTGCAGGTTGTTTTTGTTGTTTATTTCTTTTTATTTG</gDNA_template>
            <first_frame> L  D  Y  Y  F  H  L  Q  Q  Q  T  N  E  *  F  H  F  F  N  Y  R  T  R  K  G  K  *  W  I  I  Y  L  A  L  L  T  N  *  L  I  N  K  N  L  T  T  W  C  Q  L  S  N  M  F  S  L  E  P  P  L  M  V  E  P  T  E  K  L  L  S  F  Y  G  K  L  K  M  Q  P  R  Q  I  I  Q  C  H  V  G  V  S  M  F  T  Q  Y  T  W  S  W  S  W  G  R  R  S  R  G  G  G  G  I  R  R  R  N  L  G  E  *  D  K  D  H  G  E  N  G  P  P  R  S  V  T  R  I  K  P  N  D  F  G  L  V  R  L  L  L  L  K  M  L  L  E  L  M  T  K  K  P  *  S  L  E  G  I  R  Q  K  Q  T  F  L  L  R  N  I  L  M  I  T  T  T  V  P  Q  *  *  K  W  K  N  M  K  M  T  K  M  *  *  M  V  M  R  I  I  I  M  V  M  T  F  G  P  H  W  K  M  I  D  L  S  N  L  S  R  R  I  C  P  T  D  P  *  *  F  L  L  L  *  C  F  L  S  Y  L  K  N  I  F  F  L  F  C  R  L  F  L  L  F  I  S  F  Y  L </first_frame>
            <second_frame>  L  I  I  I  F  I  Y  N  N  K  Q  T  S  N  F  I  F  S  I  I  E  L  E  R  G  N  N  G  *  F  I  *  L  Y  S  Q  T  D  S  S  T  R  I  S  L  H  G  V  S  S  Q  T  C  F  L  W  S  R  R  *  W  S  S  R  R  R  S  C  S  A  F  M  G  S  *  K  C  S  H  V  R  *  F  N  A  T  *  E  Y  Q  C  S  P  S  T  R  G  V  G  V  G  E  E  E  A  E  E  E  E  E  Y  E  E  G  I  *  G  S  E  T  K  T  M  G  K  M  G  R  R  D  P  *  P  A  *  S  P  T  T  L  A  W  Y  V  C  Y  C  *  R  C  C  *  S  L  *  Q  K  S  R  R  V  *  R  E  *  G  K  N  K  L  S  S  *  G  I  Y  *  *  S  R  Q  Q  F  P  N  D  E  S  G  R  T  *  K  *  P  K  C  D  E  W  *  *  E  *  *  *  W  *  *  L  L  G  H  I  G  R  *  *  T  C  Q  I  Y  H  A  G  Y  V  P  L  I  L  N  N  F  Y  Y  Y  N  V  F  C  L  T  *  K  I  S  S  S  C  F  A  G  C  F  C  C  L  F  L  F  I   </second_frame>
            <third_frame>   *  L  L  F  S  F  T  T  T  N  K  R  V  I  S  F  F  Q  L  *  N  *  K  G  E  I  M  D  N  L  S  S  F  T  H  K  L  T  H  Q  Q  E  S  H  Y  M  V  S  A  L  K  H  V  F  S  G  A  A  V  D  G  R  A  D  G  E  A  A  Q  L  L  W  E  V  E  N  A  A  T  S  D  N  S  M  P  R  R  S  I  N  V  H  P  V  H  V  E  L  E  L  G  K  K  K  Q  R  R  R  R  N  T  K  K  E  F  R  G  V  R  Q  R  P  W  G  K  W  A  A  E  I  R  D  P  H  K  A  Q  R  L  W  L  G  T  F  V  T  A  E  D  A  A  R  A  Y  D  K  K  A  V  E  F  R  G  N  K  A  K  T  N  F  P  L  K  E  Y  I  D  D  H  D  N  S  S  P  M  M  K  V  E  E  H  E  N  D  Q  N  V  M  N  G  D  E  N  N  N  N  G  D  D  F  W  A  T  L  E  D  D  R  L  V  K  F  I  T  Q  D  M  S  H  *  S  L  I  I  S  T  I  I  M  F  F  V  L  P  E  K  Y  L  L  L  V  L  Q  V  V  F  V  V  Y  F  F  L  F  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0012A12.1" strand="+"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="115963" stop="116586"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>621</number_coding_nucleotides>
                  <number_encoded_amino_acids>207</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KGEIMDNLSSFTHKLTHQQESHYMVSALKHVFSGAAVDGRADGEAAQLLWEVENAATSDNSMPRRSINVHPVHVELELGKKKQRRRRNTKKEFRGVRQRPWGKWAAEIRDPHKAQRLWLGTFVTAEDAARAYDKKAVEFRGNKAKTNFPLKEYIDDHDNSSPMMKVEEHENDQNVMNGDENNNNGDDFWATLEDDRLVKFITQDMSH*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="-" PGL_start="120018" PGL_stop="118214"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="120018" e_stop="119514"/>
            <exon e_start="119236" e_stop="118214"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.669" acc_prob="0.856" e_score="0.996"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.996">
            <gDNA_exon_boundary e_start="120018" e_stop="119514" e_length="505"/>
          </exon>
          <intron i_serial="1" don_prob="0.669" acc_prob="0.856">
            <gDNA_intron_boundary i_start="119513" i_stop="119237" i_length="277"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="119236" e_stop="118214" e_length="1023"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="120018" stop="119514"/>
              <exon start="119236" stop="118214"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U568407" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCCCGTGTTGGGTGGTCCTATTTTTGCCTTCGGTCCACATAAGGAATCGGGTGGCTCCCAATCACAGTCGCAGAAAGCTACTGTGTCTAGCTCAGGTCCACTTGGTGCATGGCAACAATGCCATTCTACGTTAGACTCATTCTACGGTCATCCAGCAGGTTTCACTGGCCCTTTCATAAGCCCACCTGGAGGTATCCCGGGAGTTCAAGGTCCTCCGCACATGGTGGTCTATAATCATTTTGCTCCAGTTGGACAGTATGGCCAGGTTGGATTAAGCTTTATGGGTACCACTTATTTACCTTCTGGAAAGCAGCCTGATTGGAAGCACACACCCTCATCCTCCGCAATGGGTATCAACGAGGCGGATATGAATAACGTAAATATTGCTGGTTCTCAGCGAAATTTATCGAATATGCCTTCTACCGTGCAGCACCTTGGCCCTGCTTCATCAATTATGCCCATAGCTGCTTCTCCTCTGGCCATGTTTGATGTTTCTCCTTTCCAG : TCTTCACCAGAAATGCCAGTCCAAGCTCGCTGGTCTCATGTCCCTGCATCGCCTCTTCATTCTGTTCCCATTTCTCACCCCTTGCAGCAGCAAGCTGAAGGTGCATTGCCTCCTAAATTTGGTCACGGTCATTCTGTTGATAAGTCATTGAGTACCAATAGGTTCTTGGAATCTCATCCTCCAGAAGACTCTGATGGTACCCCCAGTTTTAATATTGCGACAGTTGCCAATGCAGCTCAGTTTCCTGTTGAAATTGGTCTTGGAGATTCCTCCAAGCCAGGGGTTACTGGTGGTTCTGCTCAGAGTTTGGCCAGTCAAAGCTCCTCTGGATGTGCTAATGCAGAAACAGGCAACATTGATGCTCTCAGAAATGGTGTCAGCAACAGTGGTAAAGATCAAAGTGTCAGTGGTTTCAGAACGCAGACCCAGCAGAAGAATACCTCTGCAGGCTACAACTATCACAGGGGTGGTGGAATGTCTCAGAGAAATATGGCTGGAAATGATTGGTCCCATCGCAGAATGGGTTTCCATGGCAGAAATCAGTCCTTGGGTGCGGTTCCATCTACTAAGGTGAAACAAATATATGTGGCTAAGCAAACCCTTGGTGGGTCAAAAACCACGGGATGAGAAACCACATGGTTGTTTAGTGATCTTGATAGGTAAGGATCTGTTATTGAGTGAATATATGTCGTGGGACAATCAAGCTAGTTCTGGTGCCTATGGCCTCTGAAAATAACTTAATTTGGACTTTAGATAATTGGTTGGTGATTATAGTGATCCTCTCAATTTTGTCCGGAATATGGATTTACTAGTGGTTTGGCTGCTGAGATTTGAAATTAAACTGTGCCCGGCTGTTATCTGCAAAATTTTCGTCATCTGCTTATTGCTTTGGCTTCCATTCTTTGAACAAGCTATCTGTTAACATTAGTAGAATGCTCTTGTTTTGCCTGGAAACTGGAATGTTTGGAACTTTACTCAGTCATTGGCACTGTATAATGATAACTAAGTGGTTGGAGTTCTCTT</gDNA_template>
            <first_frame> S  R  V  G  W  S  Y  F  C  L  R  S  T  *  G  I  G  W  L  P  I  T  V  A  E  S  Y  C  V  *  L  R  S  T  W  C  M  A  T  M  P  F  Y  V  R  L  I  L  R  S  S  S  R  F  H  W  P  F  H  K  P  T  W  R  Y  P  G  S  S  R  S  S  A  H  G  G  L  *  S  F  C  S  S  W  T  V  W  P  G  W  I  K  L  Y  G  Y  H  L  F  T  F  W  K  A  A  *  L  E  A  H  T  L  I  L  R  N  G  Y  Q  R  G  G  Y  E  *  R  K  Y  C  W  F  S  A  K  F  I  E  Y  A  F  Y  R  A  A  P  W  P  C  F  I  N  Y  A  H  S  C  F  S  S  G  H  V  *  C  F  S  F  P   : V  F  T  R  N  A  S  P  S  S  L  V  S  C  P  C  I  A  S  S  F  C  S  H  F  S  P  L  A  A  A  S  *  R  C  I  A  S  *  I  W  S  R  S  F  C  *  *  V  I  E  Y  Q  *  V  L  G  I  S  S  S  R  R  L  *  W  Y  P  Q  F  *  Y  C  D  S  C  Q  C  S  S  V  S  C  *  N  W  S  W  R  F  L  Q  A  R  G  Y  W  W  F  C  S  E  F  G  Q  S  K  L  L  W  M  C  *  C  R  N  R  Q  H  *  C  S  Q  K  W  C  Q  Q  Q  W  *  R  S  K  C  Q  W  F  Q  N  A  D  P  A  E  E  Y  L  C  R  L  Q  L  S  Q  G  W  W  N  V  S  E  K  Y  G  W  K  *  L  V  P  S  Q  N  G  F  P  W  Q  K  S  V  L  G  C  G  S  I  Y  *  G  E  T  N  I  C  G  *  A  N  P  W  W  V  K  N  H  G  M  R  N  H  M  V  V  *  *  S  *  *  V  R  I  C  Y  *  V  N  I  C  R  G  T  I  K  L  V  L  V  P  M  A  S  E  N  N  L  I  W  T  L  D  N  W  L  V  I  I  V  I  L  S  I  L  S  G  I  W  I  Y  *  W  F  G  C  *  D  L  K  L  N  C  A  R  L  L  S  A  K  F  S  S  S  A  Y  C  F  G  F  H  S  L  N  K  L  S  V  N  I  S  R  M  L  L  F  C  L  E  T  G  M  F  G  T  L  L  S  H  W  H  C  I  M  I  T  K  W  L  E  F  S  </first_frame>
            <second_frame>  P  V  L  G  G  P  I  F  A  F  G  P  H  K  E  S  G  G  S  Q  S  Q  S  Q  K  A  T  V  S  S  S  G  P  L  G  A  W  Q  Q  C  H  S  T  L  D  S  F  Y  G  H  P  A  G  F  T  G  P  F  I  S  P  P  G  G  I  P  G  V  Q  G  P  P  H  M  V  V  Y  N  H  F  A  P  V  G  Q  Y  G  Q  V  G  L  S  F  M  G  T  T  Y  L  P  S  G  K  Q  P  D  W  K  H  T  P  S  S  S  A  M  G  I  N  E  A  D  M  N  N  V  N  I  A  G  S  Q  R  N  L  S  N  M  P  S  T  V  Q  H  L  G  P  A  S  S  I  M  P  I  A  A  S  P  L  A  M  F  D  V  S  P  F  Q  :  S  S  P  E  M  P  V  Q  A  R  W  S  H  V  P  A  S  P  L  H  S  V  P  I  S  H  P  L  Q  Q  Q  A  E  G  A  L  P  P  K  F  G  H  G  H  S  V  D  K  S  L  S  T  N  R  F  L  E  S  H  P  P  E  D  S  D  G  T  P  S  F  N  I  A  T  V  A  N  A  A  Q  F  P  V  E  I  G  L  G  D  S  S  K  P  G  V  T  G  G  S  A  Q  S  L  A  S  Q  S  S  S  G  C  A  N  A  E  T  G  N  I  D  A  L  R  N  G  V  S  N  S  G  K  D  Q  S  V  S  G  F  R  T  Q  T  Q  Q  K  N  T  S  A  G  Y  N  Y  H  R  G  G  G  M  S  Q  R  N  M  A  G  N  D  W  S  H  R  R  M  G  F  H  G  R  N  Q  S  L  G  A  V  P  S  T  K  V  K  Q  I  Y  V  A  K  Q  T  L  G  G  S  K  T  T  G  *  E  T  T  W  L  F  S  D  L  D  R  *  G  S  V  I  E  *  I  Y  V  V  G  Q  S  S  *  F  W  C  L  W  P  L  K  I  T  *  F  G  L  *  I  I  G  W  *  L  *  *  S  S  Q  F  C  P  E  Y  G  F  T  S  G  L  A  A  E  I  *  N  *  T  V  P  G  C  Y  L  Q  N  F  R  H  L  L  I  A  L  A  S  I  L  *  T  S  Y  L  L  T  L  V  E  C  S  C  F  A  W  K  L  E  C  L  E  L  Y  S  V  I  G  T  V  *  *  *  L  S  G  W  S  S  L </second_frame>
            <third_frame>   P  C  W  V  V  L  F  L  P  S  V  H  I  R  N  R  V  A  P  N  H  S  R  R  K  L  L  C  L  A  Q  V  H  L  V  H  G  N  N  A  I  L  R  *  T  H  S  T  V  I  Q  Q  V  S  L  A  L  S  *  A  H  L  E  V  S  R  E  F  K  V  L  R  T  W  W  S  I  I  I  L  L  Q  L  D  S  M  A  R  L  D  *  A  L  W  V  P  L  I  Y  L  L  E  S  S  L  I  G  S  T  H  P  H  P  P  Q  W  V  S  T  R  R  I  *  I  T  *  I  L  L  V  L  S  E  I  Y  R  I  C  L  L  P  C  S  T  L  A  L  L  H  Q  L  C  P  *  L  L  L  L  W  P  C  L  M  F  L  L  S  S :   L  H  Q  K  C  Q  S  K  L  A  G  L  M  S  L  H  R  L  F  I  L  F  P  F  L  T  P  C  S  S  K  L  K  V  H  C  L  L  N  L  V  T  V  I  L  L  I  S  H  *  V  P  I  G  S  W  N  L  I  L  Q  K  T  L  M  V  P  P  V  L  I  L  R  Q  L  P  M  Q  L  S  F  L  L  K  L  V  L  E  I  P  P  S  Q  G  L  L  V  V  L  L  R  V  W  P  V  K  A  P  L  D  V  L  M  Q  K  Q  A  T  L  M  L  S  E  M  V  S  A  T  V  V  K  I  K  V  S  V  V  S  E  R  R  P  S  R  R  I  P  L  Q  A  T  T  I  T  G  V  V  E  C  L  R  E  I  W  L  E  M  I  G  P  I  A  E  W  V  S  M  A  E  I  S  P  W  V  R  F  H  L  L  R  *  N  K  Y  M  W  L  S  K  P  L  V  G  Q  K  P  R  D  E  K  P  H  G  C  L  V  I  L  I  G  K  D  L  L  L  S  E  Y  M  S  W  D  N  Q  A  S  S  G  A  Y  G  L  *  K  *  L  N  L  D  F  R  *  L  V  G  D  Y  S  D  P  L  N  F  V  R  N  M  D  L  L  V  V  W  L  L  R  F  E  I  K  L  C  P  A  V  I  C  K  I  F  V  I  C  L  L  L  W  L  P  F  F  E  Q  A  I  C  *  H  *  *  N  A  L  V  L  P  G  N  W  N  V  W  N  F  T  Q  S  L  A  L  Y  N  D  N  *  V  V  G  V  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0012A12.1" strand="-"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="120017" stop="119514"/>
                    <exon start="119236" stop="118610"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1128</number_coding_nucleotides>
                  <number_encoded_amino_acids>376</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PVLGGPIFAFGPHKESGGSQSQSQKATVSSSGPLGAWQQCHSTLDSFYGHPAGFTGPFISPPGGIPGVQGPPHMVVYNHFAPVGQYGQVGLSFMGTTYLPSGKQPDWKHTPSSSAMGINEADMNNVNIAGSQRNLSNMPSTVQHLGPASSIMPIAASPLAMFDVSPFQSSPEMPVQARWSHVPASPLHSVPISHPLQQQAEGALPPKFGHGHSVDKSLSTNRFLESHPPEDSDGTPSFNIATVANAAQFPVEIGLGDSSKPGVTGGSAQSLASQSSSGCANAETGNIDALRNGVSNSGKDQSVSGFRTQTQQKNTSAGYNYHRGGGMSQRNMAGNDWSHRRMGFHGRNQSLGAVPSTKVKQIYVAKQTLGGSKTTG*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0012A12.1" strand="-"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="118409" stop="118215"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>195</number_coding_nucleotides>
                  <number_encoded_amino_acids>65</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DLKLNCARLLSAKFSSSAYCFGFHSLNKLSVNISRMLLFCLETGMFGTLLSHWHCIMITKWLEFS</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 38 chains have been computed
$ 
$ memory statistics:
$ 44816 bytes spliced alignments in total
$ 20 spliced alignments have been stored
$ 2240 bytes was the average size of a spliced alignment
$ 23792 bytes predicted gene locations in total
$ 14 predicted gene locations have been stored
$ 1699 bytes was the average size of a predicted gene location
$ 1 megabytes was the average size of the backtrace matrix
$ 43 backtrace matrices have been allocated
$ 
$ date finished: 2009-12-01 08:02:31
-->
