<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-12-01 08:21:52"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C02HBa0030E13-j0fao/GenomeThreader_SGN_U_tomato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C02HBa0030E13-j0fao/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0030E13-j0fao/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U594162" ref_strand="-" ref_description="SGN-U594162 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|147806444|emb|CAN65326.1| (e_value=4e-26) hypothetical; (*ATH) AT5G67550.1 (e_value=5e-20)  Symbol: None | expressed protein, similar to expressed protein [Arabidopsis thaliana] (TAIR:At2g25270.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:XP_549958.1) | chr5:26963980-26966387 REVERSE | Aliases: K9I9.11, K9I9_... ; ">
      <seq>ggaaaatagcgtaggaacaatttgtgacccttcttctggtgcacctaattacagcttcacacctgatctgtgcccaaaggatactatcccaattgaagatctgaaatatgttctgtcaaaagtcacatgttatgaaggaaattcttcaggaaattgcgcgggtgaaggaagattcattccacaggcctcatctgtgatattattcgcttatactcaatctattcaagacctgatagaaatattccctgatttgctgagcctaagtcagtgctccaaagtaaaacaagcattcgccaacattttacagtaccagtgcaggccatttagacgttcagcacgagtactatggtcatctatgttgtcactctccattctcatgatacttttagtactaacattgatagtaaaagctcaccaagaaactggaagaagcttcgatacatgctccattactcctaaaaaagtcgaaacaataccaaaaaacttgccagattgcagtaattctgcaggcaatgtacagaatatgtagatggtttgcatttttttttctttttttgtagttatagatggaagtatacagtatacccattcccctgaagtcgtaagacgccaaaaaaatgggggtttaagttatagaaaatagaaatagagaattcttactaaacttgtacttgatatattgttcttgtcatgtacacgacttaataactgtgtacatatttgacatgaacagtgattgatgggtactagaggctaactttggccttgtaaatttgctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0030E13-j0fao/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0030E13.1" temp_strand="-" temp_description="C02HBa0030E13.1  AC226502.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0030E13 sequenced_by:kribb upload_account_name:korea">
        <position start="2470" stop="997"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="2170" g_stop="2062" g_length="109"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="109" r_length="109" r_score="0.972"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="2061" i_stop="1966" i_length="96">
            <donor d_prob="0.922" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="1965" g_stop="1297" g_length="669"/>
          <reference_exon_boundary r_type="cDNA" r_start="110" r_stop="779" r_length="670" r_score="0.985"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0030E13.1" gen_strand="-" ref_id="SGN-U594162" ref_strand="-">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>778</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0030E13.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U594162" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="2170" e_stop="2062"/>
          <exon e_start="1965" e_stop="1297"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAAAATAGCGTAGGAACAATTTGTGACCCCTTCTCTGGTGCACCTAATTACAGCTTCACACCTGATCTGTGCCCAAAGGATACTATCCCAATTGAAGATCTGAAATATGTAAGTTACAAGCTTTAACATACTGAACATATATAAGGATCTTTATGTCTCATGTCCAGTGAAAATTTGGAATTTTTTTTTAATGTTTGCCTGTAGGTTCTGTCAAAAGTCACATGTTATGAAGGAAATTCTTCAGGAAATTGCGCGGGTGAAGGAAGATTCATTCCACAGGCCTCATCTGTGATATTATTCGCTTATACTCAATCTATTCAAGACCTGATAGAAATATTCCCTGATTTGCTGAGCCTAAGTCAATGCTCCAAAGTAAAACAAGCATTCGCCAACATTTTACAGTACCAGTGCAGGCCATTTAGACGTTCAGCACGAGTACTATGGTCATCTATGTTGTCACTCTCCATTCTCATGATACTTTTAGTACTAACATTGATAGTAAAAGCTCACCAAGAAACTGGAAGAAGCTTTGATACATGCTCCATTACTCCTAAAAAAGTTGAAACAATACCAAAAACCTTGCCAGATTGCAGTAATTCTGCAGACAATGTACAGAAAATGTAGATGCTTTGCATTTTTTTTTCTTTTTTTGTAGTTATAGATGGAAGTATACAGTATACCCATTCCCCTGAAGTCGTAAGACGCCAAAAAAATGGGGG-TTAAGTTATAGAAAATAGAAATAGAGAATTCTTACTAAACTTGTACTTGATATATTGTTCTTGTCATGTACACGACTTAATAACTGTGTACATATTTGACATGAACAGTGATTGATGGATACTAGAGGCTAACTTTGGCCTTGTAAATTTGCTC</genome_strand>
        <mrna_strand>GGAAAATAGCGTAGGAACAATTTGTGACCCTTCTTCTGGTGCACCTAATTACAGCTTCACACCTGATCTGTGCCCAAAGGATACTATCCCAATTGAAGATCTGAAATAT................................................................................................GTTCTGTCAAAAGTCACATGTTATGAAGGAAATTCTTCAGGAAATTGCGCGGGTGAAGGAAGATTCATTCCACAGGCCTCATCTGTGATATTATTCGCTTATACTCAATCTATTCAAGACCTGATAGAAATATTCCCTGATTTGCTGAGCCTAAGTCAGTGCTCCAAAGTAAAACAAGCATTCGCCAACATTTTACAGTACCAGTGCAGGCCATTTAGACGTTCAGCACGAGTACTATGGTCATCTATGTTGTCACTCTCCATTCTCATGATACTTTTAGTACTAACATTGATAGTAAAAGCTCACCAAGAAACTGGAAGAAGCTTCGATACATGCTCCATTACTCCTAAAAAAGTCGAAACAATACCAAAAAACTTGCCAGATTGCAGTAATTCTGCAGGCAATGTACAGAATATGTAGATGGTTTGCATTTTTTTTTCTTTTTTTGTAGTTATAGATGGAAGTATACAGTATACCCATTCCCCTGAAGTCGTAAGACGCCAAAAAAATGGGGGTTTAAGTTATAGAAAATAGAAATAGAGAATTCTTACTAAACTTGTACTTGATATATTGTTCTTGTCATGTACACGACTTAATAACTGTGTACATATTTGACATGAACAGTGATTGATGGGTACTAGAGGCTAACTTTGGCCTTGTAAATTTGCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0030E13-j0fao/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U585393" ref_strand="+" ref_description="SGN-U585393 Tomato 200607#2 [2 ESTs aligned] (*GB) gi|147806444|emb|CAN65326.1| (e_value=7e-22) hypothetical; (*ATH) AT5G67550.1 (e_value=6e-15)  Symbol: None | expressed protein, similar to expressed protein [Arabidopsis thaliana] (TAIR:At2g25270.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:XP_549958.1) | chr5:26963980-26966387 REVERSE | Aliases: K9I9.11, K9I9_... ; ">
      <seq>cagctgtcacacaatgcatcattatcttttagaaagtattttcatgtgtataaaactagagattctgtgaaatttgataatcttatatgagttataagctattacacgatttctactttttctagctgtcttcttgcttttgattttcctgtatagtcagttccttctaacgtatgtttaaatcgatcatcaatgtcatggttagactaatggaatgctgctttggctcagttttactcatttggcactggcctcttggatttataataataatcctctgctgctggattttgacaactctgagttgggtgctgactggttttgatttctttttccatacctttgcagatgacacttgctcagctttgaaggactttcaacagaatcctcagaacaatagcttgcaaattatacttccctgtgcaaatcctggaacttctgacaaaacgttggagcagattggcgccacggttcataatttcattactcaggtactgttatctataatatacaagaaacaaggataggagcttacatatattcttagcattatctttgtgttttcgatttccagcttaattctaagctgagagaggtacaaggattaggattaaatgatatcggggaaaatagcgtaggaacaatttgtgaccccttctctggtgcacctaattacagcttcacacctgatctgtgcccaaaggatactatcccaatttgagatctgaaatatgtaagttacaagcttttacatactga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0030E13-j0fao/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0030E13.1" temp_strand="-" temp_description="C02HBa0030E13.1  AC226502.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0030E13 sequenced_by:kribb upload_account_name:korea">
        <position start="3262" stop="1736"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="2965" g_stop="2698" g_length="268"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="268" r_length="268" r_score="0.989"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="2697" i_stop="2612" i_length="86">
            <donor d_prob="0.934" d_score="1.00"/>
            <acceptor a_prob="0.140" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="2611" g_stop="2540" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="269" r_stop="340" r_length="72" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="2539" i_stop="2455" i_length="85">
            <donor d_prob="0.952" d_score="1.00"/>
            <acceptor a_prob="0.875" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="2454" g_stop="2036" g_length="419"/>
          <reference_exon_boundary r_type="cDNA" r_start="341" r_stop="759" r_length="419" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0030E13.1" gen_strand="-" ref_id="SGN-U585393" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>759</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0030E13.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U585393" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="2965" e_stop="2698"/>
          <exon e_start="2611" e_stop="2540"/>
          <exon e_start="2454" e_stop="2036"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTCTGTCACACAATGCATCATTATCTTTTAGAAAGTATTTTCATGTGTATAAAACTAGAGATTCTGTGAAATTTGATAATCTTATATGAGTTATAAGCTATTACACGATTTCTACTTTTTCTAGCTGTCTTCTTGCTTTTGATTTTCCTGTATAGTCAGTTCCTTCTAACGTATGTTTAAATCGATCATCAATGTCATGGTTAGACTAATGGAATGCTGCTTTGGCTCAGTTTTACTCATTTGGCACTGGCCTCTTGGATTTATAATGTAAGTAAGATTTTGATACTTCTGTTTGACATAGAATCGCTTTTATATTCTCAAAGCCTAATTAAACAGCTCTTATTAACTACTAGAATAATCCTCTGCTGCTGGATTTTGACAACTCTGAGTTGGGTGCTGACTGGTTTTGATTTCTTTTTCCATACGTGAGCACAAATTCTTCTCTTCCTCTCAGTAATTCAGCTTAATTTTTCATTTTATACGCCGTAACTTTAGCAAATGCTGATGCAGCTTTGCAGATGACACTTGCTCAGCTTTGAAGGACTTTCAACAGAATCCTCAGAACAATAGCTTGCAAATTATACTTCCCTGTGCAAATCCTGGAACTTCTGACAAAACGTTGGAGCAGATTGGCGCCACGGTTCATAATTTCATTACTCAGGTACTGTTATCTATAATATACAAGAAACAAGGATAGGAGCTTACATATATTCTTAGCATTATCTTTGTGTTTTCGATTTCCAGCTTAATTCTAAGCTGAGAGAGGTACAAGGATTAGGATTAAATGATATCGGGGAAAATAGCGTAGGAACAATTTGTGACCCCTTCTCTGGTGCACCTAATTACAGCTTCACACCTGATCTGTGCCCAAAGGATACTATCCCAATTGAAGATCTGAAATATGTAAGTTACAAGCTTTAACATACTGA</genome_strand>
        <mrna_strand>CAGCTGTCACACAATGCATCATTATCTTTTAGAAAGTATTTTCATGTGTATAAAACTAGAGATTCTGTGAAATTTGATAATCTTATATGAGTTATAAGCTATTACACGATTTCTACTTTTTCTAGCTGTCTTCTTGCTTTTGATTTTCCTGTATAGTCAGTTCCTTCTAACGTATGTTTAAATCGATCATCAATGTCATGGTTAGACTAATGGAATGCTGCTTTGGCTCAGTTTTACTCATTTGGCACTGGCCTCTTGGATTTATAAT......................................................................................AATAATCCTCTGCTGCTGGATTTTGACAACTCTGAGTTGGGTGCTGACTGGTTTTGATTTCTTTTTCCATAC.....................................................................................CTTTGCAGATGACACTTGCTCAGCTTTGAAGGACTTTCAACAGAATCCTCAGAACAATAGCTTGCAAATTATACTTCCCTGTGCAAATCCTGGAACTTCTGACAAAACGTTGGAGCAGATTGGCGCCACGGTTCATAATTTCATTACTCAGGTACTGTTATCTATAATATACAAGAAACAAGGATAGGAGCTTACATATATTCTTAGCATTATCTTTGTGTTTTCGATTTCCAGCTTAATTCTAAGCTGAGAGAGGTACAAGGATTAGGATTAAATGATATCGGGGAAAATAGCGTAGGAACAATTTGTGACCCCTTCTCTGGTGCACCTAATTACAGCTTCACACCTGATCTGTGCCCAAAGGATACTATCCCAATTTGAGATCTGAAATATGTAAGTTACAAGCTTTTACATACTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0030E13-j0fao/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U585396" ref_strand="+" ref_description="SGN-U585396 Tomato 200607#2 [2 ESTs aligned] (*GB) gi|157330197|emb|CAO44702.1| (e_value=3e-40) unnamed; (*ATH) AT5G67550.1 (e_value=1e-26)  Symbol: None | expressed protein, similar to expressed protein [Arabidopsis thaliana] (TAIR:At2g25270.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:XP_549958.1) | chr5:26963980-26966387 REVERSE | Aliases: K9I9.11, K9I9_... ; ">
      <seq>gtgccgaattcggcacgaggcacacaagaataaccaaaagtttcttactagccacaagctatcctaaccttaatgatcaagtcaaggaatgaatttttctcttcttttataccacttttactttttatgttttgcctcaaaaatattcaacatcatactatatcatcatgccaaaattacatggaggggttcttcttcctttcattcttttattaatttccactaatataattgcccagaaatctcttgtatttggcttcattgatcgtgatgaaatttcaaaaagacctgatcctctcagacattttaagtcatataatgggagttataatcttggtgacaagcactattgggcttctgcgggtttcacaggcatacatggatatgcaattgctgggatttggttgttagttggtttggggttttggaagttacatgatttttaagtattttcatgccaattcaagtatttcaatgattgaacattcgccttcttattatattttgatgttctcgctggttgttctgtttacaattcttgccatagttgcaagctgcgttgctttggctgcaaacaatggttttgaacatagagtagaaaagcttcgccgaacaatttttgatgctggtggtgatacatgtcaatccatcagaagggtagtaaaggttttgctaagtatgcaaactcttttaagcccttataattttcaggcagaccagacgttgaacatgacaacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0030E13-j0fao/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0030E13.1" temp_strand="-" temp_description="C02HBa0030E13.1  AC226502.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0030E13 sequenced_by:kribb upload_account_name:korea">
        <position start="4978" stop="2902"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="4677" g_stop="4340" g_length="338"/>
          <reference_exon_boundary r_type="cDNA" r_start="22" r_stop="356" r_length="335" r_score="0.982"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="4339" i_stop="4244" i_length="96">
            <donor d_prob="0.841" d_score="1.00"/>
            <acceptor a_prob="0.980" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="4243" g_stop="4056" g_length="188"/>
          <reference_exon_boundary r_type="cDNA" r_start="357" r_stop="545" r_length="189" r_score="0.973"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="4055" i_stop="3395" i_length="661">
            <donor d_prob="0.758" d_score="1.00"/>
            <acceptor a_prob="0.963" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="3394" g_stop="3202" g_length="193"/>
          <reference_exon_boundary r_type="cDNA" r_start="546" r_stop="738" r_length="193" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0030E13.1" gen_strand="-" ref_id="SGN-U585396" ref_strand="+">
        <total_alignment_score>0.981</total_alignment_score>
        <cumulative_length_of_scored_exons>719</cumulative_length_of_scored_exons>
        <coverage percentage="0.974" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0030E13.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U585396" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="4677" e_stop="4340"/>
          <exon e_start="4243" e_stop="4056"/>
          <exon e_start="3394" e_stop="3202"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACACAAGAATAACCAAAAGTTTCTTACTAGCCACAAGCTATCCTAACCTTAATGATCAAGTCAAGGAATGAATTTTTCTCTTCTTTTATACCACTTTTACTTTTTATGTTTTGCCTCAAAAATATTCAACATCATACTATATCATCATCATGCCAAAATTACATGGAAGGGTTCTTCTTCCTTTCATTCTTTTATTAATTTCCACTAATATAATTGCCCAGAAATCTCTTGTATTTGGCTTCATTGATCGCGATCAAATTTCAAAAAGACCTGATCCTCTCAGACATTTTAAGTCATATAATGGGAGTTATAATCTTGGTGACAAGCACTATTGGGCTGTAAGTTTTTATTTTTTATGATGAGATTAAATTTTTTTAAAAAAGGGAATTAGCTGCTGATTTGTTTTTTTTTTCTTTTCTTTGTTTGTTTATCAGTCTGCGGGTTTCACAGGCATACATGGATATGCAATTGCTGGGATTTGGTTGTTAGTTGGTTT-GGGTTTTGGAAGTTACATGATTTTTAAGTATTTTCATGCCAATTCAACTACTTCAATGATTGAACATTCGCCTTCGTATTATATTTTGATGTTCTCGCTGGTTGTTCTGTTTACAATTCTTGCCATGTAAGTGCTTTTGCTTGCTTAATTTTTGGTAACACTACTATTTAAATAAACATGTGCTCTGTTCCTATAGGAAATACATTAAGCAATCATGTCATATCAATCAACAAATAAGTAAAAAGCGTATAATCTCACAAAATAGTACTTTGGGCATTCCCTTATTTTTACAAGGCATAATACATAAGTTAAGCGCCATGATAACTCTATTACCTTTAACTTTGCGTGTGCACAAGTAGATATTTAAAATTATAAAAATTTGAAAAAATAGACACATTCATCCTACATAGCACCCGACATTGCAATTTTGCATCCTACGTGTATATGCCATGTAGGACACATGTGTTTACTTGTGCACAATCAAAGTTGGACGACACAATTATCCGCTGAAAACCAAGTTAACGGTCATATTTATATATTATGGTTTTTCATAACAGTAAGCTTTCAAAGAGGATTATGATTTAGAACTCATAAACTAAAAAAGAATCTTAGCTCCACCTCTAAATCAAACACATTTTATTGTCCCTATCTTATATTGATGAGGATTAGTGACCTATATATAGGAATAAAGCAATGGAGTACTACAATATTTGATATGTCGTTTATGGCTAAGTTTGATAAGAAAAGACTGACTGATGTGTCTACTACTTTTTGTTTTGTTTGGAAGAGTTGCAAGCTGCGTTGCTTTGGCTGCAAACAATGGTTTTGAACATAGAGTAGAAAGGCTTCGCCGAACAATTTTTGATGCTGGTGGTGATACATGTCAATCCATCAGAAGGGTAATAAAGGTTTTGCTAAGTATGCAAACTCTTTTAAGCCCTTATAATTTTCAGGCAGAGCAGACGTTGAACATGACAACC</genome_strand>
        <mrna_strand>ACACAAGAATAACCAAAAGTTTCTTACTAGCCACAAGCTATCCTAACCTTAATGATCAAGTCAAGGAATGAATTTTTCTCTTCTTTTATACCACTTTTACTTTTTATGTTTTGCCTCAAAAATATTCAACATCATAC--TAT-ATCATCATGCCAAAATTACATGGAGGGGTTCTTCTTCCTTTCATTCTTTTATTAATTTCCACTAATATAATTGCCCAGAAATCTCTTGTATTTGGCTTCATTGATCGTGATGAAATTTCAAAAAGACCTGATCCTCTCAGACATTTTAAGTCATATAATGGGAGTTATAATCTTGGTGACAAGCACTATTGGGCT................................................................................................TCTGCGGGTTTCACAGGCATACATGGATATGCAATTGCTGGGATTTGGTTGTTAGTTGGTTTGGGGTTTTGGAAGTTACATGATTTTTAAGTATTTTCATGCCAATTCAAGTATTTCAATGATTGAACATTCGCCTTCTTATTATATTTTGATGTTCTCGCTGGTTGTTCTGTTTACAATTCTTGCCAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTGCAAGCTGCGTTGCTTTGGCTGCAAACAATGGTTTTGAACATAGAGTAGAAAAGCTTCGCCGAACAATTTTTGATGCTGGTGGTGATACATGTCAATCCATCAGAAGGGTAGTAAAGGTTTTGCTAAGTATGCAAACTCTTTTAAGCCCTTATAATTTTCAGGCAGACCAGACGTTGAACATGACAACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0030E13-j0fao/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U571254" ref_strand="+" ref_description="SGN-U571254 Tomato 200607#2 [20 ESTs aligned] (*GB) gi|147858134|emb|CAN83936.1| (e_value=3e-96) hypothetical; (*ATH) AT3G49870.1 (e_value=5e-95)  Symbol: ATARLA1C | ADP-ribosylation factor, putative, similar to ADP-ribosylation factor-like protein 1 (SP:P40616) (Homo sapiens); ARF3 ADP-RIBOSYLATION FACTOR,GP:453191 Arabidopsis thaliana; contains domain PF00025: ADP-ribosylation factor family ... ; (*SWP) sp|Q5ZKQ8|ARL8A_CHICK (e_value=9e-69) ADP-ribosylation factor-like protein 8A OS=Gallus gallus GN=ARL8A; ">
      <seq>tgcaccaggaaggggaaaaataccgagagggtatttaattgtgttgtgtttgagagggatctttcttctttatactgatattcagatctttctcttttacgattcttcgcatcagccatgggtatctgggaagcttttctcaattggcttcgaagcctcttctttaagcaggaaatggagctttcattgataggattgcaaaatgcaggaaaaacatctcttgtaaatgttattgcaactggtggatacagtgaagacatgataccaactgtgggatttaacatgcgcaaagtgacgaaaggaaatgtcactataaaattgtgggaccttggaggtcaacccagattccgcagtatgtgggagcgttactgtcgtgctgtttctgctatagtttatgttgttgatgctgctgatcctgataacctcagcatatcaagtagtgaactccatgacctgttgagcaagccatctctgagtggtattccactgctggtgctgggaaacaaaattgacaagcctgattccctttccaaacaggctttgactgagcagatgggattgaaatcaataactgatagagaagtgtgctgctatatgatctcgtgcaagaattccaccaatattgactcagtcattgattggcttgttaagcactcgaaatcaaagagctaaagatgactttaactttttctttttttttgtagtggtgctgatctgtatgataaatttgctgaggctattggttttttctgctggtttctccagagttctcttgtactgtaaattaagttattttgtctattgagtgagttgttacatgttttttttcttgccatttttcgtctcaactctctctaattgtgtttgcaattcctcttatactttttacttgtctgctgcacgagtttgtgtgaaaggaacggatctttttaagtttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0030E13-j0fao/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0030E13.1" temp_strand="+" temp_description="C02HBa0030E13.1  AC226502.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0030E13 sequenced_by:kribb upload_account_name:korea">
        <position start="16470" stop="21290"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16763" g_stop="16917" g_length="155"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="155" r_length="155" r_score="0.968"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16918" i_stop="19258" i_length="2341">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.879" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="19259" g_stop="19340" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="156" r_stop="237" r_length="82" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19341" i_stop="19463" i_length="123">
            <donor d_prob="0.949" d_score="1.00"/>
            <acceptor a_prob="0.974" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19464" g_stop="19496" g_length="33"/>
          <reference_exon_boundary r_type="cDNA" r_start="238" r_stop="270" r_length="33" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="19497" i_stop="19604" i_length="108">
            <donor d_prob="0.957" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="19605" g_stop="19726" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="271" r_stop="392" r_length="122" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="19727" i_stop="20125" i_length="399">
            <donor d_prob="0.873" d_score="1.00"/>
            <acceptor a_prob="0.951" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="20126" g_stop="20287" g_length="162"/>
          <reference_exon_boundary r_type="cDNA" r_start="393" r_stop="554" r_length="162" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="20288" i_stop="20606" i_length="319">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="20607" g_stop="20990" g_length="384"/>
          <reference_exon_boundary r_type="cDNA" r_start="555" r_stop="938" r_length="384" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0030E13.1" gen_strand="+" ref_id="SGN-U571254" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>938</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0030E13.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U571254" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16763" e_stop="16917"/>
          <exon e_start="19259" e_stop="19340"/>
          <exon e_start="19464" e_stop="19496"/>
          <exon e_start="19605" e_stop="19726"/>
          <exon e_start="20126" e_stop="20287"/>
          <exon e_start="20607" e_stop="20990"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAAGGGGGAAGGGGAAAAATACCGAGAGGGTATTTAATTGTGTTGTGTTTGAGAGGGATCTTTCTTCTTTATACTGATATTCAGATCTTTCTCTTTTACGATTCTTCGCATCAGCCATGGGTATCTGGGAAGCTTTTCTCAATTGGCTTCGAAGGTATATATATTTTTTTGTTACCATGAACTTTGCAAACTATAATTCGTGAAGGGCTAGGATGAAAGACGAAAAACATTATCAAGTTAAATAGGATCCATATAACCTATATGAATTAAATTGAGATTGATGCTTAGTTGATGAATTTTTCTATTATGCATACTCTTTGTCATAACGTGCCAATTATTGAGTATTTTGTGTGCTGTCGATTGGTTAATTACATATGGGGATGTTGATATGCAGTTGTTGGCTTATGGATAGGTTAATTTGTCATGTGGCGTACGATCTATCTTCATTTTTTTCCTATTTGGATGGTCTGTTGAACGGTTGGTTAATGACTCTGTTGTCTGTGTCTTCCTATTTGTTTTGTTTGAGATTTCTGGAATTTCGAATAAAAAGATGGGAGTTTTGCATCTTCTTTCTTAGTCAAACGAGTCTTTGATTTGTTGGGACAGTACTGTGTGTCTGCATTTTATCATGAAACTTGGGTAGTAGTGGTCATCGTAGTCCCACATATCTTACAAATTTCTATCACTCACACTTTCATATGCTGGAAAAGAAATTGGAATGTGAAATCAATGGCAGCAAACATTCAGTCTGGTTATCAGATGTGGGCATAACAAGGTTTTGGGTTTTTAGGCTACCAGATGTTGAACTGTCTACAAAAGGACTTCTTTTTTCCAACTCTATCCAGCGTGTCTCTTATCTTGTCCCATTTGGTCACTTCTGAAAGAGTTATGACTTATGGGGCGGAAGTTTCTGGTCATTCAACCTCTATTCTACTTCACTACTACACCTCCCAACAACACGACAACGCACATTAAAAGATTGTTCTTTTAGGTAGTGGTAGTTTGAAATGACAAAAATCTGTTTTATTTGAGCATTTTAGGATAAACCTCTCAACCGACACTAGTAGTTCTCATCCACACTCAGAGGTGTAGCCAGGGTTAGGAGTCGGAACTGGTAGTGCTCATCCACATTCAGAGGCGGAGTTGGTGTTCTAAATTTTAGGATAAAAATATTGCAAAACATGCTTTCTTTCTTCTTCTTCTTTTTTGAAAAGAAACTTTTGTTGATAGTGAGGTTTGAACCCACAACTCTAGCGTGGAAGGCATTTCCATAGACCATTCCTTACCACTGAGCCGTCAATTAGCTTTGTTAGGGGTTTAAAAGTTATATATATCTATCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATATCTTTAATTTTCTAATATAAATACATGATCTACGGAAAAATTACTTGATTTGTCTGTACCCCCAAACCCCCACTTAGGCCCCTGTCCACACGCGCTAGAAGGATTTGACTAGAAAGTCGTCTTGCTGATGCGATAGTCCTTGGGTATGACCACATTCGTTTCGACAATAGGATAGGGAAAGAAAATCTATAGACGAGACCAACTGGGACCGAACCTTTCTATCTTCTTCTTTCACTTTTTGTTCCCGCCTGCCGAGGACCTGTGTTTCAATTCATGTTGTACTGATTGTAAATCTTTTCCTACCTGTGTTTCAATTCGTGTTGTACTGATTGTAAATCTTTTGCTAGCTATAAGAAGTGATTTCATGTCTTTCCTTCTAAGGATCCTGTGCCAGCTGAATCGTGTTTCTTTCCCTAATATGGTCGCTCATTTTTTTTCTCTTTGTTCATGAGAAGGTCTTGATAACTTATTCCTTTTGTCATGGTATCCTTTTGGTTTATTTACTTTCCAGATTTGGCTGGACATTTTCCACCTAAATCCTTGTAGCTTTTGACTTTTCTAAGTTTCTTGCAAAAAAGTGAATTGTGTTCCATCGGAGTCATTGTTGTAGACAGACTCTTTGCCTGTTCAATGATTGACCACCTCGTATCAGAAAAATCAACTCTATATATGTGGTTGGAACACCTTTTAATATTTTTGAATGGACTAGACACTGACTGATGAAAGTGAAACCATTGATGCTTCCCCTTGACCTTTCATCATATACAAAACTTTTTCCTGAGGTTCAACTGGGTGATTCCAGAAATGACGACCAAAAATAACTTATATTTGACAGATTTTACAATGTCACCATCCATTATTCAGTCTTGTGTCATCCCACCATGCTTGAGCACTTTAGATCTTGTAGTTACTTTTAGTGTAAGGTCTTTCAATTATGGTGTTGCGTCTCATTATTACTTCAGAGTTTGGAACTTGACAGTTGAAACTTATTGTCATCTTCTTTCTGAGGTAGACTTAAAAGTATAAAGCATGTCAGAATTCCAATATTTTAAATGCATATGTCTCCTTTGGCTCTTATTAAATGATTCCTCATGTCAAAACTTGCTTGTTCCAGCCTCTTCTTTAAGCAGGAAATGGAGCTTTCATTGATAGGATTGCAAAATGCAGGAAAAACATCTCTTGTAAATGTTATTGCAGTAAGTAAATTCCTTGTTAACCTTCTAGTGCCAGCTCATCATTATTGTTTCACTTGCTTTGCTTCCATATAACTGATGGAATCTGACACCTTAATGGGTTTGTTTCTCTCTTCTTATTCTTAGACTGGTGGATACAGTGAAGACATGATACCAACTGTAAGTTTTCATCCTAAAGGATCTCATACCGGTTTTTACTTTTTGGCCAACTCTGCTAAATACTTTTAAGTGATCTTATATAATTTTATGGAAATTTTTGGTATTCAGGTGGGATTTAACATGCGCAAAGTGACGAAAGGAAATGTCACTATAAAATTGTGGGACCTTGGAGGTCAACCCAGATTCCGCAGTATGTGGGAGCGTTACTGTCGTGCTGTTTCTGCTATAGTGTATGCATCTCCTCTCCAGCTTATATTACTGTATTTGCTTTTACAGATAGATGTGAGATGAATCCATTTATACACTCATTTAGAAGATAACACATGATACTCTTATTACGAATTGAGATGAATCTTCTCCATGGTTTATTAATGAACAGTTTTATTGAATCTCATGGTTTGCCTGTCCTATTTGGTGCTTGACAGATTTATATTTTTATGCCTTCGATAGGTGGAATTCTTGATCTTGATCATTTATGTGTATTTAAAGGAATGATGCTAAATATGTTGCTCCCTTAAGAGTTTTAACAAATTTTAAGGACCTCAACTGTAATTTGATATACATGAATTCTTATTTTATAGCCTCGAGCTAATTTGGTTTCTGGAATGTTTAAATGTCCTTCCCCGCAGTTATGTTGTTGATGCTGCTGATCCTGATAACCTCAGCATATCAAGTAGTGAACTCCATGACCTGTTGAGCAAGCCATCTCTGAGTGGTATTCCACTGCTGGTGCTGGGAAACAAAATTGACAAGCCTGATTCCCTTTCCAAACAGGCTTTGACTGAGCAGATGTAAGTGCGGAGTATTAAGCTAGCGATTGGTGGCCTTTTGGCCTTAGTTTACTGTATGGTTGTGGTTAGTGGAAGGGAGGTAAAAGTTTTATCTTTCACTTTAGGTCCAATTCCATAAAACTGGAAAGGAAGGAAAAGAAATTTACTTCTTTCACATGGTATAAAAAGCTTTTGGAAGGAATGCAAATACCTCTGCATGTCCTTCTCATATCTTAGCGGCAGAGAAGATTGGATCATCCCTCCTGCTATCCCTCCTATTTTTATAGCATTAAATATATCTAGGTGCTCTTATCTTAAAGAACATTATGTTGTTTTGCAGGGGATTGAAATCAATAACTGATAGAGAAGTGTGCTGCTATATGATCTCGTGCAAGAATTCCACCAATATTGACTCAGTCATTGATTGGCTTGTTAAGCACTCGAAATCAAAGAGCTAAAGATGACTTTAACTTTTTCTTTTTTTTTGTAGTGGTGCTGATCTGTATGATAAATTTGCTGAGGCTATTGGTTTTTTCTGCTGGTTTCTCCAGAGTTCTCTTGTACTGTAAATTAAGTTATTTTGTCTATTGAGTGAGTTGTTACATGTTTTTTTTCTTGCCATTTTTCGTCTCAACTCTCTCTAATTGTGTTTGCAATTCCTCTTATACTTTTTACTTGTCTGCTGCACGAGTTTGTGTGAAAGGAACGGATCTTTTTAAGTTTT</genome_strand>
        <mrna_strand>TGCACCAGGAAGGGGAAAAATACCGAGAGGGTATTTAATTGTGTTGTGTTTGAGAGGGATCTTTCTTCTTTATACTGATATTCAGATCTTTCTCTTTTACGATTCTTCGCATCAGCCATGGGTATCTGGGAAGCTTTTCTCAATTGGCTTCGAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTCTTCTTTAAGCAGGAAATGGAGCTTTCATTGATAGGATTGCAAAATGCAGGAAAAACATCTCTTGTAAATGTTATTGCA...........................................................................................................................ACTGGTGGATACAGTGAAGACATGATACCAACT............................................................................................................GTGGGATTTAACATGCGCAAAGTGACGAAAGGAAATGTCACTATAAAATTGTGGGACCTTGGAGGTCAACCCAGATTCCGCAGTATGTGGGAGCGTTACTGTCGTGCTGTTTCTGCTATAGT...............................................................................................................................................................................................................................................................................................................................................................................................................TTATGTTGTTGATGCTGCTGATCCTGATAACCTCAGCATATCAAGTAGTGAACTCCATGACCTGTTGAGCAAGCCATCTCTGAGTGGTATTCCACTGCTGGTGCTGGGAAACAAAATTGACAAGCCTGATTCCCTTTCCAAACAGGCTTTGACTGAGCAGAT...............................................................................................................................................................................................................................................................................................................................GGGATTGAAATCAATAACTGATAGAGAAGTGTGCTGCTATATGATCTCGTGCAAGAATTCCACCAATATTGACTCAGTCATTGATTGGCTTGTTAAGCACTCGAAATCAAAGAGCTAAAGATGACTTTAACTTTTTCTTTTTTTTTGTAGTGGTGCTGATCTGTATGATAAATTTGCTGAGGCTATTGGTTTTTTCTGCTGGTTTCTCCAGAGTTCTCTTGTACTGTAAATTAAGTTATTTTGTCTATTGAGTGAGTTGTTACATGTTTTTTTTCTTGCCATTTTTCGTCTCAACTCTCTCTAATTGTGTTTGCAATTCCTCTTATACTTTTTACTTGTCTGCTGCACGAGTTTGTGTGAAAGGAACGGATCTTTTTAAGTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0030E13-j0fao/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U601984" ref_strand="+" ref_description="SGN-U601984 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>cagccagatttggctggacattttccacctaaatccttgtagcttttgacttttctaagtttcttgcaaaaaagtgaattgtgttccatcggagtcattgttgtagacagactctttgcctgttcaatgattgaccacctcgtatcagaaaaatcaactctatatatgtggttggaacaccttttaatatttttgaatggactagacactgactgatgaaagtgaaaccattgatgcttccccttgacctttcatcatatacaaaactttttcctgaggttcaactgggtgattccagaaatgacgaccaaaaataacttatatttgacagattttacaatgtcaccatccattattcagtcttgtgtcatcccaccatgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0030E13-j0fao/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0030E13.1" temp_strand="+" temp_description="C02HBa0030E13.1  AC226502.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0030E13 sequenced_by:kribb upload_account_name:korea">
        <position start="18352" stop="19329"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18649" g_stop="19029" g_length="381"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="381" r_length="381" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0030E13.1" gen_strand="+" ref_id="SGN-U601984" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>381</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0030E13.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U601984" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18649" e_stop="19029"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCCAGATTTGGCTGGACATTTTCCACCTAAATCCTTGTAGCTTTTGACTTTTCTAAGTTTCTTGCAAAAAAGTGAATTGTGTTCCATCGGAGTCATTGTTGTAGACAGACTCTTTGCCTGTTCAATGATTGACCACCTCGTATCAGAAAAATCAACTCTATATATGTGGTTGGAACACCTTTTAATATTTTTGAATGGACTAGACACTGACTGATGAAAGTGAAACCATTGATGCTTCCCCTTGACCTTTCATCATATACAAAACTTTTTCCTGAGGTTCAACTGGGTGATTCCAGAAATGACGACCAAAAATAACTTATATTTGACAGATTTTACAATGTCACCATCCATTATTCAGTCTTGTGTCATCCCACCATGC</genome_strand>
        <mrna_strand>CAGCCAGATTTGGCTGGACATTTTCCACCTAAATCCTTGTAGCTTTTGACTTTTCTAAGTTTCTTGCAAAAAAGTGAATTGTGTTCCATCGGAGTCATTGTTGTAGACAGACTCTTTGCCTGTTCAATGATTGACCACCTCGTATCAGAAAAATCAACTCTATATATGTGGTTGGAACACCTTTTAATATTTTTGAATGGACTAGACACTGACTGATGAAAGTGAAACCATTGATGCTTCCCCTTGACCTTTCATCATATACAAAACTTTTTCCTGAGGTTCAACTGGGTGATTCCAGAAATGACGACCAAAAATAACTTATATTTGACAGATTTTACAATGTCACCATCCATTATTCAGTCTTGTGTCATCCCACCATGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0030E13-j0fao/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U571256" ref_strand="+" ref_description="SGN-U571256 Tomato 200607#2 [7 ESTs aligned] (*GB) gi|22331720|ref|NP_190556.2| (e_value=2e-39) ADP-ribosylation factor, putative [Arabidopsis thaliana]; (*ATH) AT3G49870.1 (e_value=2e-41)  Symbol: ATARLA1C | ADP-ribosylation factor, putative, similar to ADP-ribosylation factor-like protein 1 (SP:P40616) (Homo sapiens); ARF3 ADP-RIBOSYLATION FACTOR,GP:453191 Arabidopsis thaliana; contains domain PF00025: ADP-ribosylation factor family ... ; (*SWP) sp|Q6NZW8|ARL8B_DANRE (e_value=5e-34) ADP-ribosylation factor-like protein 8B OS=Danio rerio GN=arl8b; ">
      <seq>agactgcagtttagtgtaaggtctttcaattatggtgttgcgtctcattattacttcagagtttggaacttgacagttgaaacttattgtcatcttctttctgaggtagacttaaaagtataaagcatgtcagaattccaatattttaaatgcatatgtctcctttggctcttattaaatgattcctcatgtcaaaacttgcttgttccagcctcttctttaagcaggaaatggagctttcattgataggattgcaaaatgcaggaaaaacatctcttgtaaatgttattgcaactggtggatacagtgaagacatgataccaactgtgggatttaacatgcgcaaagtgacgaaaggaaatgtcactataaaattgtgggaccttggaggtcaacccagattccgcagtatgtgggagcgttactgtcgtgctgtttctgctatagtgtatgcatctcctctccagcttatattactgtatttgcttttacagatagatgtgagatgaatccatttatacactcatttagaagataacacatgatactcttattacgaattgagatgaatcttctccatggtttattaatgaacagttttattgaatctcatggtttgcctgtcctatttggtgcttgacagatttatatttttatgccttcgataggtggaattcttgatcttgatcatttatgtgtatttaaaggaatgatgctaaatatgttgnctcccttaagagttttaacaaattttaaggacctcgactgtaatttgatata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0030E13-j0fao/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0030E13.1" temp_strand="+" temp_description="C02HBa0030E13.1  AC226502.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0030E13 sequenced_by:kribb upload_account_name:korea">
        <position start="18757" stop="20357"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19048" g_stop="19340" g_length="293"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="293" r_length="293" r_score="0.976"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19341" i_stop="19463" i_length="123">
            <donor d_prob="0.949" d_score="1.00"/>
            <acceptor a_prob="0.974" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="19464" g_stop="19496" g_length="33"/>
          <reference_exon_boundary r_type="cDNA" r_start="294" r_stop="326" r_length="33" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19497" i_stop="19604" i_length="108">
            <donor d_prob="0.957" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19605" g_stop="20057" g_length="453"/>
          <reference_exon_boundary r_type="cDNA" r_start="327" r_stop="780" r_length="454" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0030E13.1" gen_strand="+" ref_id="SGN-U571256" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>779</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0030E13.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U571256" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19048" e_stop="19340"/>
          <exon e_start="19464" e_stop="19496"/>
          <exon e_start="19605" e_stop="20057"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTAGTTACTTTTAGTGTAAGGTCTTTCAATTATGGTGTTGCGTCTCATTATTACTTCAGAGTTTGGAACTTGACAGTTGAAACTTATTGTCATCTTCTTTCTGAGGTAGACTTAAAAGTATAAAGCATGTCAGAATTCCAATATTTTAAATGCATATGTCTCCTTTGGCTCTTATTAAATGATTCCTCATGTCAAAACTTGCTTGTTCCAGCCTCTTCTTTAAGCAGGAAATGGAGCTTTCATTGATAGGATTGCAAAATGCAGGAAAAACATCTCTTGTAAATGTTATTGCAGTAAGTAAATTCCTTGTTAACCTTCTAGTGCCAGCTCATCATTATTGTTTCACTTGCTTTGCTTCCATATAACTGATGGAATCTGACACCTTAATGGGTTTGTTTCTCTCTTCTTATTCTTAGACTGGTGGATACAGTGAAGACATGATACCAACTGTAAGTTTTCATCCTAAAGGATCTCATACCGGTTTTTACTTTTTGGCCAACTCTGCTAAATACTTTTAAGTGATCTTATATAATTTTATGGAAATTTTTGGTATTCAGGTGGGATTTAACATGCGCAAAGTGACGAAAGGAAATGTCACTATAAAATTGTGGGACCTTGGAGGTCAACCCAGATTCCGCAGTATGTGGGAGCGTTACTGTCGTGCTGTTTCTGCTATAGTGTATGCATCTCCTCTCCAGCTTATATTACTGTATTTGCTTTTACAGATAGATGTGAGATGAATCCATTTATACACTCATTTAGAAGATAACACATGATACTCTTATTACGAATTGAGATGAATCTTCTCCATGGTTTATTAATGAACAGTTTTATTGAATCTCATGGTTTGCCTGTCCTATTTGGTGCTTGACAGATTTATATTTTTATGCCTTCGATAGGTGGAATTCTTGATCTTGATCATTTATGTGTATTTAAAGGAATGATGCTAAATATGTTG-CTCCCTTAAGAGTTTTAACAAATTTTAAGGACCTCAACTGTAATTTGATATA</genome_strand>
        <mrna_strand>AGACTGCAGTTTAGTGTAAGGTCTTTCAATTATGGTGTTGCGTCTCATTATTACTTCAGAGTTTGGAACTTGACAGTTGAAACTTATTGTCATCTTCTTTCTGAGGTAGACTTAAAAGTATAAAGCATGTCAGAATTCCAATATTTTAAATGCATATGTCTCCTTTGGCTCTTATTAAATGATTCCTCATGTCAAAACTTGCTTGTTCCAGCCTCTTCTTTAAGCAGGAAATGGAGCTTTCATTGATAGGATTGCAAAATGCAGGAAAAACATCTCTTGTAAATGTTATTGCA...........................................................................................................................ACTGGTGGATACAGTGAAGACATGATACCAACT............................................................................................................GTGGGATTTAACATGCGCAAAGTGACGAAAGGAAATGTCACTATAAAATTGTGGGACCTTGGAGGTCAACCCAGATTCCGCAGTATGTGGGAGCGTTACTGTCGTGCTGTTTCTGCTATAGTGTATGCATCTCCTCTCCAGCTTATATTACTGTATTTGCTTTTACAGATAGATGTGAGATGAATCCATTTATACACTCATTTAGAAGATAACACATGATACTCTTATTACGAATTGAGATGAATCTTCTCCATGGTTTATTAATGAACAGTTTTATTGAATCTCATGGTTTGCCTGTCCTATTTGGTGCTTGACAGATTTATATTTTTATGCCTTCGATAGGTGGAATTCTTGATCTTGATCATTTATGTGTATTTAAAGGAATGATGCTAAATATGTTGNCTCCCTTAAGAGTTTTAACAAATTTTAAGGACCTCGACTGTAATTTGATATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0030E13-j0fao/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U588595" ref_strand="+" ref_description="SGN-U588595 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|118481399|gb|ABK92642.1| (e_value=2e-39) unknown; (*ATH) AT3G49870.1 (e_value=2e-41)  Symbol: ATARLA1C | ADP-ribosylation factor, putative, similar to ADP-ribosylation factor-like protein 1 (SP:P40616) (Homo sapiens); ARF3 ADP-RIBOSYLATION FACTOR,GP:453191 Arabidopsis thaliana; contains domain PF00025: ADP-ribosylation factor family ... ; (*SWP) sp|Q6NZW8|ARL8B_DANRE (e_value=6e-34) ADP-ribosylation factor-like protein 8B OS=Danio rerio GN=arl8b; ">
      <seq>tttagtgtaaggtctttcaattatggtgttgcgtctcattattacttcagagtttggaacttgacagttgaaacttattgtcatcttctttctgaggtagacttaaaagtataaagcatgtcagaattccaatattttaaatgcatatgtctcctttggctcttattaaatgattcctcatgtcaaaacttgcttgttccagcctcttctttaagcaggaaatggagctttcattgataggattgcaaaatgcaggaaaaacatctcttgtaaatgttattgcaactggtggatacagtgaagacatgataccaactgtgggatttaacatgcgcaaagtgacgaaaggaaatgtcactataaaattgtgggaccttggaggtcaacccagattccgcagtatgtgggagcgttactgtcgtgctgtttctgctatagtgtatgcatctcctctccagcttatattactgtatttgcttttacagatagatgtgagatgaatccatttatacactcatttagaagataacacatgatactcttattacgaattgagatgaatcttctccatggtttattaatgaacagttttattgaatctcatggtttgcctgtcctatttggtgcttgacagatttatatttttatgccttcgataggtggaattcttgatcttgatcatttatgtgtatttaaaggaatgatgctaaatatgttgctcccttaagagttttaacaaattttaaggacctcaactgtaatttgatatacatgaattcttattttatagcctcnagctaatttggtttct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0030E13-j0fao/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0030E13.1" temp_strand="+" temp_description="C02HBa0030E13.1  AC226502.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0030E13 sequenced_by:kribb upload_account_name:korea">
        <position start="18757" stop="20398"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19057" g_stop="19340" g_length="284"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="284" r_length="284" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19341" i_stop="19463" i_length="123">
            <donor d_prob="0.949" d_score="1.00"/>
            <acceptor a_prob="0.974" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="19464" g_stop="19496" g_length="33"/>
          <reference_exon_boundary r_type="cDNA" r_start="285" r_stop="317" r_length="33" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19497" i_stop="19604" i_length="108">
            <donor d_prob="0.957" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19605" g_stop="20098" g_length="494"/>
          <reference_exon_boundary r_type="cDNA" r_start="318" r_stop="811" r_length="494" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0030E13.1" gen_strand="+" ref_id="SGN-U588595" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>811</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0030E13.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U588595" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19057" e_stop="19340"/>
          <exon e_start="19464" e_stop="19496"/>
          <exon e_start="19605" e_stop="20098"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTAGTGTAAGGTCTTTCAATTATGGTGTTGCGTCTCATTATTACTTCAGAGTTTGGAACTTGACAGTTGAAACTTATTGTCATCTTCTTTCTGAGGTAGACTTAAAAGTATAAAGCATGTCAGAATTCCAATATTTTAAATGCATATGTCTCCTTTGGCTCTTATTAAATGATTCCTCATGTCAAAACTTGCTTGTTCCAGCCTCTTCTTTAAGCAGGAAATGGAGCTTTCATTGATAGGATTGCAAAATGCAGGAAAAACATCTCTTGTAAATGTTATTGCAGTAAGTAAATTCCTTGTTAACCTTCTAGTGCCAGCTCATCATTATTGTTTCACTTGCTTTGCTTCCATATAACTGATGGAATCTGACACCTTAATGGGTTTGTTTCTCTCTTCTTATTCTTAGACTGGTGGATACAGTGAAGACATGATACCAACTGTAAGTTTTCATCCTAAAGGATCTCATACCGGTTTTTACTTTTTGGCCAACTCTGCTAAATACTTTTAAGTGATCTTATATAATTTTATGGAAATTTTTGGTATTCAGGTGGGATTTAACATGCGCAAAGTGACGAAAGGAAATGTCACTATAAAATTGTGGGACCTTGGAGGTCAACCCAGATTCCGCAGTATGTGGGAGCGTTACTGTCGTGCTGTTTCTGCTATAGTGTATGCATCTCCTCTCCAGCTTATATTACTGTATTTGCTTTTACAGATAGATGTGAGATGAATCCATTTATACACTCATTTAGAAGATAACACATGATACTCTTATTACGAATTGAGATGAATCTTCTCCATGGTTTATTAATGAACAGTTTTATTGAATCTCATGGTTTGCCTGTCCTATTTGGTGCTTGACAGATTTATATTTTTATGCCTTCGATAGGTGGAATTCTTGATCTTGATCATTTATGTGTATTTAAAGGAATGATGCTAAATATGTTGCTCCCTTAAGAGTTTTAACAAATTTTAAGGACCTCAACTGTAATTTGATATACATGAATTCTTATTTTATAGCCTCGAGCTAATTTGGTTTCT</genome_strand>
        <mrna_strand>TTTAGTGTAAGGTCTTTCAATTATGGTGTTGCGTCTCATTATTACTTCAGAGTTTGGAACTTGACAGTTGAAACTTATTGTCATCTTCTTTCTGAGGTAGACTTAAAAGTATAAAGCATGTCAGAATTCCAATATTTTAAATGCATATGTCTCCTTTGGCTCTTATTAAATGATTCCTCATGTCAAAACTTGCTTGTTCCAGCCTCTTCTTTAAGCAGGAAATGGAGCTTTCATTGATAGGATTGCAAAATGCAGGAAAAACATCTCTTGTAAATGTTATTGCA...........................................................................................................................ACTGGTGGATACAGTGAAGACATGATACCAACT............................................................................................................GTGGGATTTAACATGCGCAAAGTGACGAAAGGAAATGTCACTATAAAATTGTGGGACCTTGGAGGTCAACCCAGATTCCGCAGTATGTGGGAGCGTTACTGTCGTGCTGTTTCTGCTATAGTGTATGCATCTCCTCTCCAGCTTATATTACTGTATTTGCTTTTACAGATAGATGTGAGATGAATCCATTTATACACTCATTTAGAAGATAACACATGATACTCTTATTACGAATTGAGATGAATCTTCTCCATGGTTTATTAATGAACAGTTTTATTGAATCTCATGGTTTGCCTGTCCTATTTGGTGCTTGACAGATTTATATTTTTATGCCTTCGATAGGTGGAATTCTTGATCTTGATCATTTATGTGTATTTAAAGGAATGATGCTAAATATGTTGCTCCCTTAAGAGTTTTAACAAATTTTAAGGACCTCAACTGTAATTTGATATACATGAATTCTTATTTTATAGCCTCNAGCTAATTTGGTTTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0030E13-j0fao/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U583701" ref_strand="+" ref_description="SGN-U583701 Tomato 200607#2 [11 ESTs aligned] (*GB) gi|147859636|emb|CAN83117.1| (e_value=6e-38) hypothetical; (*ATH) AT3G03360.1 (e_value=8e-28) | Symbol: None | F-box family protein, low similarity to ribosomal RNA apurinic site specific lyase (Triticum aestivum) GI:6505722; contains F-box domain Pfam:PF00646 | chr3:795225-796925 FORWARD | Aliases: T21P5.22, T21P5_22; (*SWP) sp|Q9LYZ4|FBL79_ARATH (e_value=4e-27) F-box/LRR-repeat protein At5g02910 OS=Arabidopsis thaliana GN=At5g02910; ">
      <seq>tcaattttttctagctttagaaaaacggctgcttctacagcaccttgtttcttacaaagaaaatgggcaggctcttaataagaggggtgcgtttggcggcaactatataaaacaatttggggaggctcaattatcatcacgagtaaattttgggttctagggtttcaaatttgatcattcaccattgtcgacgaaacacgatggtttaacttctgttgagaggcgatttatttgttcttcctggtacagcagtggttaagcatatagaggtctctcattcttgcaatgaactcggaaaggaaatgtagtgtgacaaccatgggcgaccaagaccaatctcctagcagttctggtgatgatggacattctaaaggccagattcttgaaaacccacctcaggaaaaagtgaacattgagacagaaagtgaagaaactggcattgattggatcagcgagctacctgacgctctaattgtacaaattctctctctattgcccatacaagatgctttcagaacatctgttctctctaaacgttggcaatacccctggacttctatagacaaccttatttttgacaaccgaaataccaattggtccaatagagagaatgtgattaataagttcatttccttcacagacaatgtactacctctcctttgctgctctaatattaaaaagttctgtctatatttccgattttgccttgttgcttcttatagttccaaaattgacaagtggcttgaaattgttttgaagaaaaaagtggaggatcttgacctggaaatatggtattatgatcaaagcccctatgtcttgccacaagttctctgcaacaactcatccattgtaaaatttaattgcgagttttgcagaataccagaagaatgtgtactaaactggacatccctgaagagtttgacactaacctatttgtttcttcgggacgaacatgttgaacaaatagtaacaaattgtcctcagttggaattgttgaagctatgtgagttttgtggttttcatcgcttacatataacttctccaaaatgtaggagtctgcaattgattgatcatgcccatcctgatggagattggggtccatttggcggtgattgttccttcgaagtagttgccccatatattcaacatctaaagatttcggggcattttgataatgtggaaataagacttggggacctttcatctttagtcattgctgatcttactttctctgttgatattgtatatgacaataccgtggaacttctcttggcaagtgtacgttgtgctaatgagctaatgatcccatgctggtttatcgagatgatttatgtggcggtgatagaaaagaagaaagatgttccatttctgatgcggaagtgcaaacggttgacgataaattcttggatttcaaaaaatgccattctcggcataggtgttctcttaaagtcaactccttatctggagaatttgacgatacttcatgaagagggagatttctttgtctgggatgaatacttggaagaaaaagtgtttgattggttaggagacaaatccctctccttgcatgaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0030E13-j0fao/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0030E13.1" temp_strand="-" temp_description="C02HBa0030E13.1  AC226502.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0030E13 sequenced_by:kribb upload_account_name:korea">
        <position start="35711" stop="30508"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="35411" g_stop="35169" g_length="243"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="243" r_length="243" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="35168" i_stop="34639" i_length="530">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.969" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="34638" g_stop="33559" g_length="1080"/>
          <reference_exon_boundary r_type="cDNA" r_start="244" r_stop="1323" r_length="1080" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="33558" i_stop="31670" i_length="1889">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="31669" g_stop="31502" g_length="168"/>
          <reference_exon_boundary r_type="cDNA" r_start="1324" r_stop="1491" r_length="168" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="31501" i_stop="30891" i_length="611">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.980" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="30890" g_stop="30808" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="1492" r_stop="1574" r_length="83" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0030E13.1" gen_strand="-" ref_id="SGN-U583701" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>1574</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0030E13.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U583701" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="35411" e_stop="35169"/>
          <exon e_start="34638" e_stop="33559"/>
          <exon e_start="31669" e_stop="31502"/>
          <exon e_start="30890" e_stop="30808"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAATTTTTTCTAGCTTTAGAAAAACGGCTGCTTCTACAGCACCTTGTTTCTTACAAAGAAAATGGGCAGGCTCTTAATAAGAGGGGTGCGTTTGGCGGCAACTATATAAAACAATTTGGGGAGGCTCAATTATCATCACGAGTAAATTTTGGGTTCTAGGGTTTCAAATTTGATCATTCACCATTGTCGACGAAACACGATGGTTTAACTTCTGTTGAGAGGCGATTTATTTGTTCTTCCTGGTACGACTCCCTTCATTTTTTACCCATATAATTTTAGGCTTCTGCTACTTTTATGTTTGAGTTAACTTGACATCAATTCAGTATTCCATAGAGAAGAAAAATAGAATGGGTTAGTTAGATGTTACTGATAAACTTAAAAAGAGCTCGAATTTTAATTTAAGAGTATAGAGTAGTTGATTTGTAAAATTCAGATGCGAACTTAGTATTTCTAGAACATGACGCACCACTAAAAAAAATAAATAAAAAAATGTATTAATTGGTAATTGATTGATTCCTAGTGCTCTAGGTAATTAATTCAACATTCAATCAAGTGAACTGGGCTTCATGTGCCCCTTTTAAGGCTATAAATTTGCCACTGGTCAAACCAACGTAGATAGAGAAATGATAAATGGTCGGAGTAGGTACATGAGTAGTTTAGTATATAGGTCTCTCATTCTTGTAGGGAGCATTTTTCCAGAGCAGGAATCAAGGAGTATCAGACTTTTGGTTAAGATCAAAATTTATTAATATTTGCTCGTTTCTCCGCGCAGGTACAGCAGTGGTTAAGCATATAGAGGTCTCTCATTCTTGCAATGAACTCGGAAAGGAAATGTAGTGTGACAACCATGGGCGACCAAGACCAATCTCCTAGCAGTTCTGGTGATGATGGACATTCTAAAGGCCAGATTCTTGAAAACCCACCTCAGGAAAAAGTGAACATTGAGACAGAAAGTGAAGAAACTGGCATTGATTGGATCAGCGAGCTACCTGACGCTCTAATTGTACAAATTCTCTCTCTATTGCCCATACAAGATGCTTTCAGAACATCTGTTCTCTCTAAACGTTGGCAATACCCCTGGACTTCTATAGACAACCTTATTTTTGACAACCGAAATACCAATTGGTCCAATAGAGAGAATGTGATTAATAAGTTCATTTCCTTCACAGACAATGTACTACCTCTCCTTTGCTGCTCTAATATTAAAAAGTTCTGTCTATATTTCCGATTTTGCCTTGTTGCTTCTTATAGTTCCAAAATTGACAAGTGGCTTGAAATTGTTTTGAAGAAAAAAGTGGAGGATCTTGACCTGGAAATATGGTATTATGATCAAAGCCCCTATGTCTTGCCACAAGTTCTCTGCAACAACTCATCCATTGTAAAATTTAATTGCGAGTTTTGCAGAATACCAGAAGAATGTGTACTAAACTGGACATCCCTGAAGAGTTTGACACTAACCTATTTGTTTCTTCGGGACGAACATGTTGAACAAATAGTAACAAATTGTCCTCAGTTGGAATTGTTGAAGCTATGTGAGTTTTGTGGTTTTCATCGCTTACATATAACTTCTCCAAAATGTAGGAGTCTGCAATTGATTGATCATGCCCATCCTGATGGAGATTGGGGTCCATTTGGCGGTGATTGTTCCTTCGAAGTAGTTGCCCCATATATTCAACATCTAAAGATTTCGGGGCATTTTGATAATGTGGAAATAAGACTTGGGGACCTTTCATCTTTAGTCATTGCTGATCTTACTTTCTCTGTTGATATTGTATATGACAATACCGTGGAACTTCTCTTGGCAAGTGTACGTTGTGCTAATGAGCTAATGATCCCATGCTGGTTTATCGAGGTAAGTTTTCAGCCAAAAACTCTCCAGTCTTTTTTATGCTGAATATGAATATAATACACATACATGTGTTGTGTCAGTGAGAACAATTTACAATACTTTTGAAAACCACATACCAAGAAATGTGTGTGCATTTAAAGTCAAATTATAATTAAGATAGACTAAACAAAGTCAGAATACTAAGGGGGAAAAAAAGAATGACACAGTAACAAAAAGAAAAAGATTCAATCTAGACAGCTCTGAATCTCCAGAAGAACTTAAACAATATAGAGAAAATTGAGAGCACGATGATGCAGGTGTAAAACTTGTCTCTGTAAGATGTATTGCTCTATAGTAAAACAGACGTAAAAAGGTAAAATTGAAATAAGATAGAAGGTCTACCTAATCTTGGAGTTTGATACCAAGGAAACACTTGTCTAGGCTAAAAGGCAAGTAATGGTAATACTCACTACATTAAGTAAATCATAGAGTGACTAGTTGAAGAATATTCTTTGAATAAGGAACTTTTTAGATGAGCCAAATGCACCCAAACAAATCAATAGCCAAATGGCCACTCGTTATTAGGATTGATGAGTGAGAAGGGACACTTGCATATATAGGTACTCTTTTGGTGCATTAATGAGTAATCACTCGTCGTTGGTGTCAAATCCTCTGTTGTCGCTGGCATAGGTCCCCACACTACTCGAATATCCCTGATTTGCTGTGAATGAAAAAGTAGTTCATATCCTCTATGAACCTCTCACATCATGAGCACCTACTACAGATGTTGACCCTCTTCTTTGGAGGTTCTCCTGGGTTAAACAAGCTCCTTAAGGCACCAGCCAGGTAAAGCAAAGATCTTTAAGCATCCTACTTCCAGGGGAGCTTTGCTTTTCCAAATGCATTTCATAAGCCAAAATGTGCTACTGCCAGAAGATCTCCTAGATAGACTAATATTCTTTGATCTTGAAGTTACCTACTGTGTTTCCTTTCCACAAAAGAGATTCAGGACTGGAAGATAAAGGGGGGCAGCTATGCAACTTATATAAAAGTGAGGACACGGTTAAATTCACAATCATTTTTGCTGCACCAGAGACCAAAAACGCAGTCCTGTTCAGATCACATTTCTGAAATTGTAGCATCTTGTGTTTGTGCAATACTGTAAATATATGGATACTGCATCTTCGGTGGTGTTTGGACTAGCCAAACATCCTCCCAGAACTTGTCTCCTTCACATTTCCAACTTGAAGAGGTGATGGCGAAAAAATAATTTTTGTGGACTCTAATATGCCTCCATATACCATAGGGACTGTTGCCGAACCTGGTCAGTTATCCAAGGGATCAGGCATGCATTTTTACCATAACGACACCTCCAAAGTGCCTTCTCTTCATTACTACATCCTCATAACTACTTCTGCAGTGAGCTGTTGCTCTGCATCTTCAATTTCTCTACTCTTAAGTTCTCCCTGCCTTCAAATTTGCGGTGACTGATTCCCAACTTACCAAGTGAAGGTTCTGTATTCTCTCTCTCTCTTGCAGAAGCAATTCCTATGTAGTTTGTTTGTCCAACCTTTTTGTCACTGAAAACATGCAGTGGAGCAAAGAGATAGGGTATATGGGATATTATTCTGAACTTAAAACAGTTTTTGTTGGATGTTATCATCACACAGTAGCTTTGTAACTGAATTCCTTGTTAACTATGTTTGTTTTCTAATATATTATAGAGACTATGGGGAAGTTCTGAGGCTAGAAAAAGATCAAACTAAGACCATAGAAACATTCTGTTGTCGGGTGAAGGGGTGTGAAGGGTGAAACTTTAACCCATGAGTTTGGGATGTTTTTAAGCCCTATAAAATTTGATATCGTGATACTTAATGTACTTACCTTCTACTCTGCTTCTCTCTCCCATTTAGATGATTTATGTGGCGGTGATAGAAAAGAAGAAAGATGTTCCATTTCTGATGCGGAAGTGCAAACGGTTGACGATAAATTCTTGGATTTCAAAAAATGCCATTCTCGGCATAGGTGTTCTCTTAAAGTCAACTCCTTATCTGGAGAATTTGACGATACTTCATGAAGAGGTATGTTTTCAACTGATTCTTGCTTTGAGATACCTTTTATATTCTTTTTCACTCTTTAATTTTTTCCCTTGTGTTTGTTTCATTATCCTTTACATTTTCAATATCACGTTTTGAGGCATAATATAGCCTTGGATATCAAGCTGTTTTATGTATAGCGCCCTTTATTACTGAAATTGTTGCCCATCAGACCTACATTTTCTAATTTCTAAATATATGCGACCATAGTGTTGCTGCACTGAAGACTCTTCTTCCTTTTACAATGAGTTATTAGCTTCTTGCTTTTGTTTGGCATAAAATATTACATTCAATCGTCTATTGATCTCCAACGACATCAATGGGAAGTCTTCAACATTTTTAGTACTTTCCACTAAATTACTATCAGTGGTCTATCTCAATGTAATTATACACCTTCTGACTAAAAAGTACTTTCATCTGTTTGTCTAATGTTTGACTACTATGTTGCTTATATGTCCGTCTCAGATTCTCTTCTGTGTGTTGTTCTGCAATTTCAGTACCATAAAATTCCATTCTAAAATCCATACATTTACTCAAGTATGTTCCACCTGTTACACTTACACTTAACCTGATTTGTGGTTCTTCTGTATCCGTAGGGAGATTTCTTTGTCTGGGATGAATACTTGGAAGAAGAAGTGTTTGATTGGTTAGGAGACAAATCCCTCTCCTTGCATGAAAA</genome_strand>
        <mrna_strand>TCAATTTTTTCTAGCTTTAGAAAAACGGCTGCTTCTACAGCACCTTGTTTCTTACAAAGAAAATGGGCAGGCTCTTAATAAGAGGGGTGCGTTTGGCGGCAACTATATAAAACAATTTGGGGAGGCTCAATTATCATCACGAGTAAATTTTGGGTTCTAGGGTTTCAAATTTGATCATTCACCATTGTCGACGAAACACGATGGTTTAACTTCTGTTGAGAGGCGATTTATTTGTTCTTCCTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACAGCAGTGGTTAAGCATATAGAGGTCTCTCATTCTTGCAATGAACTCGGAAAGGAAATGTAGTGTGACAACCATGGGCGACCAAGACCAATCTCCTAGCAGTTCTGGTGATGATGGACATTCTAAAGGCCAGATTCTTGAAAACCCACCTCAGGAAAAAGTGAACATTGAGACAGAAAGTGAAGAAACTGGCATTGATTGGATCAGCGAGCTACCTGACGCTCTAATTGTACAAATTCTCTCTCTATTGCCCATACAAGATGCTTTCAGAACATCTGTTCTCTCTAAACGTTGGCAATACCCCTGGACTTCTATAGACAACCTTATTTTTGACAACCGAAATACCAATTGGTCCAATAGAGAGAATGTGATTAATAAGTTCATTTCCTTCACAGACAATGTACTACCTCTCCTTTGCTGCTCTAATATTAAAAAGTTCTGTCTATATTTCCGATTTTGCCTTGTTGCTTCTTATAGTTCCAAAATTGACAAGTGGCTTGAAATTGTTTTGAAGAAAAAAGTGGAGGATCTTGACCTGGAAATATGGTATTATGATCAAAGCCCCTATGTCTTGCCACAAGTTCTCTGCAACAACTCATCCATTGTAAAATTTAATTGCGAGTTTTGCAGAATACCAGAAGAATGTGTACTAAACTGGACATCCCTGAAGAGTTTGACACTAACCTATTTGTTTCTTCGGGACGAACATGTTGAACAAATAGTAACAAATTGTCCTCAGTTGGAATTGTTGAAGCTATGTGAGTTTTGTGGTTTTCATCGCTTACATATAACTTCTCCAAAATGTAGGAGTCTGCAATTGATTGATCATGCCCATCCTGATGGAGATTGGGGTCCATTTGGCGGTGATTGTTCCTTCGAAGTAGTTGCCCCATATATTCAACATCTAAAGATTTCGGGGCATTTTGATAATGTGGAAATAAGACTTGGGGACCTTTCATCTTTAGTCATTGCTGATCTTACTTTCTCTGTTGATATTGTATATGACAATACCGTGGAACTTCTCTTGGCAAGTGTACGTTGTGCTAATGAGCTAATGATCCCATGCTGGTTTATCGAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGATTTATGTGGCGGTGATAGAAAAGAAGAAAGATGTTCCATTTCTGATGCGGAAGTGCAAACGGTTGACGATAAATTCTTGGATTTCAAAAAATGCCATTCTCGGCATAGGTGTTCTCTTAAAGTCAACTCCTTATCTGGAGAATTTGACGATACTTCATGAAGAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGATTTCTTTGTCTGGGATGAATACTTGGAAGAAAAAGTGTTTGATTGGTTAGGAGACAAATCCCTCTCCTTGCATGAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0030E13-j0fao/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U580455" ref_strand="+" ref_description="SGN-U580455 Tomato 200607#2 [45 ESTs aligned] (*GB) gi|147858131|emb|CAN83933.1| (e_value=6e-60) hypothetical; (*ATH) AT5G67590.1 (e_value=5e-48)  Symbol: None | NADH-ubiquinone oxidoreductase-related, contains weak similarity to NADH-ubiquinone oxidoreductase 21 kDa subunit, mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-21KD) (CI-21KD). (Swiss-Prot:P25711) (Neurospora crassa);... ; (*SWP) sp|Q5XIF3|NDUS4_RAT (e_value=2e-18) NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Rattus norvegicus GN=Ndufs4; ">
      <seq>ggcaaagtaatatctggcttcatcacttcggccggattctatcatctcaggcaaatggctagctctctccgacgactagcgacgcattcctctcaagccgcctggcgatcttctgtgacgccgctatgtagacaatttgcgtcagaagcgttggtcgaaatcaagcccggagagatcggtatggtctctggtattccagatgaacatcttcgtagaagggttgtgattttctctcctgctcggactgctagtcaacaaggctctggaaaagttggcagatggaaaatcaatttcatgtctacccagaaatgggagaatccattgatggggtggacatccacaggggatccatatgccaatgttggtgattcagctcttagttttgagagtgaagaagctgcaaaagcattcgctgaaaagcatggttgggaatatacggtgaagaaacgacacacaccattgttaaagatcaagtcatatgcggacaactttaagtggaagggacctcccaaggcagcagaataatttattttctacttcaattcaagtacttgaggtgcttgtggatgttctacctaatgccctgcattctgttttctttttttttttaccttctctaaagttgggcagatctccttcttgaaggatttaataaatcaaacttatgaaaatccacaagtacatgcaatgtcttaaaacctttgtgaagcaatttccgggtgtttctgtacttgtgggacattgtgtcgtgtcaaaacactagtagccttgtttttctctccaaaagaaattagcgtgtcaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0030E13-j0fao/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0030E13.1" temp_strand="+" temp_description="C02HBa0030E13.1  AC226502.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0030E13 sequenced_by:kribb upload_account_name:korea">
        <position start="37499" stop="42750"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="37799" g_stop="38017" g_length="219"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="219" r_length="219" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="38018" i_stop="38924" i_length="907">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.950" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="38925" g_stop="39013" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="220" r_stop="308" r_length="89" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="39014" i_stop="40705" i_length="1692">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="40706" g_stop="40835" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="309" r_stop="438" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="40836" i_stop="41604" i_length="769">
            <donor d_prob="0.961" d_score="1.00"/>
            <acceptor a_prob="0.980" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="41605" g_stop="41634" g_length="30"/>
          <reference_exon_boundary r_type="cDNA" r_start="439" r_stop="468" r_length="30" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="41635" i_stop="42114" i_length="480">
            <donor d_prob="0.994" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="42115" g_stop="42450" g_length="336"/>
          <reference_exon_boundary r_type="cDNA" r_start="469" r_stop="804" r_length="336" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0030E13.1" gen_strand="+" ref_id="SGN-U580455" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>804</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0030E13.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U580455" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="37799" e_stop="38017"/>
          <exon e_start="38925" e_stop="39013"/>
          <exon e_start="40706" e_stop="40835"/>
          <exon e_start="41605" e_stop="41634"/>
          <exon e_start="42115" e_stop="42450"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGCAAAGTAATATCTGGCTTCATCACTTCGGCCGGATTCTATCATCTCAGGCAAATGGCTAGCTCTCTCCGACGACTAGCGACGCATTCCTCTCAAGCCGCCTGGCGATCTTCTGTGACGCCGCTATGTAGACAATTTGCGTCAGAAGCGTTGGTCGAAATCAAGCCCGGAGAGATCGGTATGGTCTCTGGTATTCCAGATGAACATCTTCGTAGAAGGGTATAATTTCTTTTCTTTATGTCTCTTCGCTAATATCTATTATTTTGTCAGGTCATTTAGGTGTATGAAAAACTTCATTGTAGGTTACCAATTTATTAGGGCTTCTATAGCAGATCCATGGGTTCCGCTATTTAGGGTTAGCAAATGATTTGGGAAATGGATATGGAGGATCCATATAGTTAGAATCAATTGATTTGAAATTGATATAGTTGATTGATTGCTTTTCATTTTTGCCTTTGTGAATTTATGTTACCTCTAATCCGAAGACTATTCCTTTTTAGCCCTCCTTTTGTCTTCCTCGCTCCTATTCAATGATATAGAAGAGACCATAGCTGCTTAGACACTTGTGACAAGTAAAAAGTTGTAAGTTTTCATGGTAGGGAGTAGTTTCTGCTTGGCAAGTATTAAGTTGAACTTGGACCTTCTAGAGCTTGAATTGATAAGCCTTAATATCAGACCCCAGCTTGGATTAATGCAAACTTTTTCCCCACGGAGGTTTTTCATCCATTTCTGCACAAATTTAGTTATATAGATTTCTTATCAAATCTATAATCTGATCTATATCATCTATACGAAGCTGTTTACACCAAAAAAGTAGAGATAATTCACATTTATTTCTCTCTATGTTCGTGTCTATTATTTTATTTATCCCATATTTTTCCTTTCATGTGCATGGTTGGTTTGCCCTCTCTTTCAATTTTGGTTATATACAAATGTATTGGCTTGTTCAATTTCTTCAACTCTTATATTCTCAAATTTCTTGAAGTGTTTAAATGTGCCAAATGATCCTAATCTTTCTTTTAGTACATATATTTTCTGTCTCTTCATGTGGAAAATTGCTCTCAGTTAGTGGATTAGATCTTATGCACCATGCCCCTTTTGGTAGTTAATAATGTTTGCTCACCAGGTTGTGATTTTCTCTCCTGCTCGGACTGCTAGTCAACAAGGCTCTGGAAAAGTTGGCAGATGGAAAATCAATTTCATGTCTACCCAGAAGTATGTTTTTGGATATCTTCCTTTTCTTTTCATTATTAAGAAGTTAGCATGGTTCACCAATATTAGTCTATTTTTAGCCAGCACAAAATCCTGCAGGACTTTGTACAGTAATTACAATATACAAACTCATCTACCTTATCCTTCTGTCCTGTACTAAACAAGAAGAAACAAAGAGAAAACCTTAAAGAAAGTTTTGACAAGTATAGATTATAAGTTTTTTTTCCCGTTAAAAGACTATAATTTTAATTGTGCCTAGGTCTCAAAATACAATGTTTGACTATGAAATTTGGACCACAACAGGTTGTTTGGTTTGTGAAGGTTAAAGAGATTGTGAACTTATTTTCCTCTAGTGGTTCATATAATTATAGAGATCTGGACATTGGTGTCTTCCTTTTTATCTACTCCCTTTGAACCATTTCATATGTCACCGTTTGACTTGGCATGGTGCTTAAGAAAAAAAGGACTTTTGAAATTTGTGGTCTAAAACAATCTTAGAACATTTGTGTGACCTTAAATCATTTCATTAAGGTAAAAGGGGAATTTTAAATTAAATTGTTTCCAATTATAGTAAGGTGACACTCTTTTTGGGACGGACTTAAAAGTAAAGGGTGGAAAGGGTTCCACATAAAATGGGACTGGGGAGTATCATTTAATACAATGTTGGTGCATCTGATTATGGGGTTTTTTTGGTCGTGGAGGGAGGTAATTAGGAAGGTATATTGGTTTTGACAACGCCAAAACTCTCGGGTTCATAAAAAGAAATTACTAATAAGAGTCCAGAGTTCTTCCTATGCTGTAAAGATCAATTATTGATTAACTTTAAACTTCAATAGAGAATGAACCCCATTCATTGAATTCAGCTTAGCCAGACGGTGTTTCTTCGAGTTTACTTAAGTAGAAAAATTGCTGATTGTTGATGAAAAAAATGTATATTCATATCAGAAGATGCTGAGAGAGAAGCACTCATAATTTATGGCCATGGTAAAAGTTTTGTACTCTCCTCTATGCGAATCAAACTATTTTATCCTGGGTAATTTCATGGATGGTCATCCAACTAAAAATCTTAGTGCACCAAAGCTATAAAATTAATTTTTGTAATGGAAAATGACTCTTAACTATGCGCAAATATCACATTAAATAAAAAACAATAATAATGCTAGAATCTGGTCATAGAAAACACAAGTAGGTTGCTAAATTGTATGAAATTTCTATACAAGTACAACCACGTCAGCAACTCAACCCTTAGATAATATCTACGTGGTGCTACCTAAATGAACAATTTTTTTCCGATCCAACTTACTACCCGACATCTTTACTGTGTGAGCCATCATTTTTTAGGACAGATTTATATTCTTGTAAGTGGTGTCACGTGGATATTATGTAAGATTAGTTGCTGAAATGACAACCTACTTGTGTTTCCAGACTCATTTTAGCATCTCTCGCTTTTTTTTTAAAAAAAAAATTCTACGTATATCCTATATTAGCCGAATGGAGTTTTCATGTTATTACAGTTAGTTATATTACTTTGGTGCAATAAATTGGAAGTTGGATGACAACGTATGAATTTAGCTATTTTGTTCTAATTATTGCAATTCCCTGTATCTTTAAGATTTGAGGAATAAAAGTTTATTTTTAAGGCGGATTGTTTGGCGACATAGCATCACTAAATTTTTCTTTCTTCTCTTTATGTAGATGGGAGAATCCATTGATGGGGTGGACATCCACAGGGGATCCATATGCCAATGTTGGTGATTCAGCTCTTAGTTTTGAGAGTGAAGAAGCTGCAAAAGCATTCGCTGAAAAGCATGGTTGGGAATATACGGTACATCATTGAGTTTCTTAAACTCCTGTTGTGTTTTCCGGTAGCTGAATGAACTTTGTTAATTCCAATTTCTTAAGTATTCTGGAATTAACAGAAGAAACTTATACTAGAAGCATGGGCCAAGAAGGGTGGGGGTGAGTGGAGATTGCCCCCTTCCCTGTTGCATGATATAATCAAAGGTCTTTAAATGCTCCATATCTGGGAAGTTTGAATTAGTCTAGGATTTTCGGTTTTGACACCTAAAAGCTCTTTGACCCCGCTCCACCGATCATGAACAGGTTCTTAAAATACTCCATGTTAGGAAAAGGCATGAATTAGGATGTTATTTTAGGTTTTGGCTCCTCTAAAAACTCTGACCATTCAAGCCTTCTAATCCTCTATGCAAACTCAATGTCCTTTCAATCTGACATGTTATGTGCTGTGAAATAATCATTTAATGCCTCACATATTCAAGTCCGACTTCAATTTGGTAATACTGTATTAAAATATTGATAAGTTGGGACAAATCTCAGTTTTTCTAACAGACAGACAAACAACAACTAAAGTTTCATATCACAAACAAGAAAACCAAAAACCCAGATGTAAATTCAAGATTTTGCAGTTTACAACAGTAACACATTCTCAATGAAATCCCACTAAGTGGGGAGCATCAAGCTTTAAGCTAAACATTCTGGTTTATATTATATTAAGAGATAAACAGAATCACCTTTCATTTTTGGTTTCAACGAGATGCTTATGCGGTACACCTTTTTTTTTTTTGGTTCTGCAGGTGAAGAAACGACACACACCATTGTTAAAGGTCAGTCTATACTGTAATCTGATTTAGACATCTAGTCTAGTTTATTTCCTCTTGGGATTGTGAAAACTCATGTTCCCTTGTTTGCTTAGGAAATTGAAGTAGCTGTCTGTAGACACAGTATAGGGAGATAACTATCACCTCATGAATTTTTTGGTGCCACCTTTACCGATTTAAAAGCCTAGATTGTTTTCCTGTTTTTTTGAAAGGACCTTTCTATCACACACAATTCCAAGTTCCTCTCATATCTGCAGATATACCAAGGCAAGAAACATTCTAGTTTTGATGTTGTAATGCTGTCGCAAAGGAATTGATCAAAACTTTTAAACTACAAGCACTTTAAAGTTTTCAAAAATAATTTAATTATTGACTGGCTCAAAGGATAGCATATATTCGTTGAACGCGCGCACAACCAAAACCTAACACAAGGGCCTTCAGTTATCTGTGTTTAACTTTCTTTATAACCTGCCATATGTTTTGCAGATCAAGTCATATGCGGACAACTTTAAGTGGAAGGGACCTCCCAAGGCAGCAGAATAATTTATTTTCTACTTCAATTCAAGTACTTGAGGTGCTTGTGGATGTTCTACCTAATGCCCTGCATTCTGTTTTCTTTTTTTTTTTACCTTCTCTAAAGTTGGGCAGATCTCCTTCTTGAAGGATTTAATAAATCAAACTTATGAAAATCCACAAGTACATGCAATGTCTTAAAACCTTTGTGAAGCAATTTCCGGGTGTTTCTGTACTTGTGGGACATTGTGTCGTGTCAAAACACTAGTAGCCTTGTTTTTCTCTCCAAAAGAAATTAGCGTGTCAAAA</genome_strand>
        <mrna_strand>GGCAAAGTAATATCTGGCTTCATCACTTCGGCCGGATTCTATCATCTCAGGCAAATGGCTAGCTCTCTCCGACGACTAGCGACGCATTCCTCTCAAGCCGCCTGGCGATCTTCTGTGACGCCGCTATGTAGACAATTTGCGTCAGAAGCGTTGGTCGAAATCAAGCCCGGAGAGATCGGTATGGTCTCTGGTATTCCAGATGAACATCTTCGTAGAAGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTGATTTTCTCTCCTGCTCGGACTGCTAGTCAACAAGGCTCTGGAAAAGTTGGCAGATGGAAAATCAATTTCATGTCTACCCAGAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGGAGAATCCATTGATGGGGTGGACATCCACAGGGGATCCATATGCCAATGTTGGTGATTCAGCTCTTAGTTTTGAGAGTGAAGAAGCTGCAAAAGCATTCGCTGAAAAGCATGGTTGGGAATATACG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAAGAAACGACACACACCATTGTTAAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAAGTCATATGCGGACAACTTTAAGTGGAAGGGACCTCCCAAGGCAGCAGAATAATTTATTTTCTACTTCAATTCAAGTACTTGAGGTGCTTGTGGATGTTCTACCTAATGCCCTGCATTCTGTTTTCTTTTTTTTTTTACCTTCTCTAAAGTTGGGCAGATCTCCTTCTTGAAGGATTTAATAAATCAAACTTATGAAAATCCACAAGTACATGCAATGTCTTAAAACCTTTGTGAAGCAATTTCCGGGTGTTTCTGTACTTGTGGGACATTGTGTCGTGTCAAAACACTAGTAGCCTTGTTTTTCTCTCCAAAAGAAATTAGCGTGTCAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0030E13-j0fao/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U591154" ref_strand="+" ref_description="SGN-U591154 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|147858131|emb|CAN83933.1| (e_value=6e-60) hypothetical; (*ATH) AT5G67590.1 (e_value=5e-48)  Symbol: None | NADH-ubiquinone oxidoreductase-related, contains weak similarity to NADH-ubiquinone oxidoreductase 21 kDa subunit, mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-21KD) (CI-21KD). (Swiss-Prot:P25711) (Neurospora crassa);... ; (*SWP) sp|Q5XIF3|NDUS4_RAT (e_value=2e-18) NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Rattus norvegicus GN=Ndufs4; ">
      <seq>gggcaaatggctagctctctccgacgactagcgacgcattcctctcaagccgcctggcgatcttctgtgacgccgctatgtagacaatttgcgtcagaagcgttggtcgaaatcaagcccggagagatcggtatggtctctggtattccagatgaacatcttcgtagaagggttgtgattttctctcctgctcggactgctagtcaacaaggctctggaaaagttggcagatggaaaatcaatttcatgtctacccagaaatgggagaatccattgatggggtggacatccacaggggatccatatgccaatgttggtgattcagctcttagttttgagagtgaagaagctgcaaaagcattcgctgaaaagcatggttgggaatatacggtgaagaaacgacacacaccattgttaaagatcaagtcatatgcggacaactttaagtggaagggacctcccaaggcagcagaataatttattttctacttcaattcaagtacttgaggtgcttgtggatgttctacctaatgccctgcattctgttttctttttttttttaccttctctaaagttgggcagatctccttcttgaaggatttaataaatcaaacttatgaaaatccacaagtacatgcaatgtcttaaaacctttgtgaaagcatttccggggtgttctgtacttgtgggacattgtgtcgtgtcaaaacctagtagccttgttttctctccaaagaaattagcgtgtcaaatacttacgactgtgatttgtcggtgagtttgtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0030E13-j0fao/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0030E13.1" temp_strand="+" temp_description="C02HBa0030E13.1  AC226502.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0030E13 sequenced_by:kribb upload_account_name:korea">
        <position start="37548" stop="42784"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="37847" g_stop="38017" g_length="171"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="171" r_length="171" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="38018" i_stop="38924" i_length="907">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.950" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="38925" g_stop="39013" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="172" r_stop="260" r_length="89" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="39014" i_stop="40705" i_length="1692">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="40706" g_stop="40835" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="261" r_stop="390" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="40836" i_stop="41604" i_length="769">
            <donor d_prob="0.961" d_score="1.00"/>
            <acceptor a_prob="0.980" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="41605" g_stop="41634" g_length="30"/>
          <reference_exon_boundary r_type="cDNA" r_start="391" r_stop="420" r_length="30" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="41635" i_stop="42114" i_length="480">
            <donor d_prob="0.994" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="42115" g_stop="42484" g_length="370"/>
          <reference_exon_boundary r_type="cDNA" r_start="421" r_stop="785" r_length="365" r_score="0.962"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0030E13.1" gen_strand="+" ref_id="SGN-U591154" ref_strand="+">
        <total_alignment_score>0.980</total_alignment_score>
        <cumulative_length_of_scored_exons>790</cumulative_length_of_scored_exons>
        <coverage percentage="1.006" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0030E13.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U591154" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="37847" e_stop="38017"/>
          <exon e_start="38925" e_stop="39013"/>
          <exon e_start="40706" e_stop="40835"/>
          <exon e_start="41605" e_stop="41634"/>
          <exon e_start="42115" e_stop="42484"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGCAAATGGCTAGCTCTCTCCGACGACTAGCGACGCATTCCTCTCAAGCCGCCTGGCGATCTTCTGTGACGCCGCTATGTAGACAATTTGCGTCAGAAGCGTTGGTCGAAATCAAGCCCGGAGAGATCGGTATGGTCTCTGGTATTCCAGATGAACATCTTCGTAGAAGGGTATAATTTCTTTTCTTTATGTCTCTTCGCTAATATCTATTATTTTGTCAGGTCATTTAGGTGTATGAAAAACTTCATTGTAGGTTACCAATTTATTAGGGCTTCTATAGCAGATCCATGGGTTCCGCTATTTAGGGTTAGCAAATGATTTGGGAAATGGATATGGAGGATCCATATAGTTAGAATCAATTGATTTGAAATTGATATAGTTGATTGATTGCTTTTCATTTTTGCCTTTGTGAATTTATGTTACCTCTAATCCGAAGACTATTCCTTTTTAGCCCTCCTTTTGTCTTCCTCGCTCCTATTCAATGATATAGAAGAGACCATAGCTGCTTAGACACTTGTGACAAGTAAAAAGTTGTAAGTTTTCATGGTAGGGAGTAGTTTCTGCTTGGCAAGTATTAAGTTGAACTTGGACCTTCTAGAGCTTGAATTGATAAGCCTTAATATCAGACCCCAGCTTGGATTAATGCAAACTTTTTCCCCACGGAGGTTTTTCATCCATTTCTGCACAAATTTAGTTATATAGATTTCTTATCAAATCTATAATCTGATCTATATCATCTATACGAAGCTGTTTACACCAAAAAAGTAGAGATAATTCACATTTATTTCTCTCTATGTTCGTGTCTATTATTTTATTTATCCCATATTTTTCCTTTCATGTGCATGGTTGGTTTGCCCTCTCTTTCAATTTTGGTTATATACAAATGTATTGGCTTGTTCAATTTCTTCAACTCTTATATTCTCAAATTTCTTGAAGTGTTTAAATGTGCCAAATGATCCTAATCTTTCTTTTAGTACATATATTTTCTGTCTCTTCATGTGGAAAATTGCTCTCAGTTAGTGGATTAGATCTTATGCACCATGCCCCTTTTGGTAGTTAATAATGTTTGCTCACCAGGTTGTGATTTTCTCTCCTGCTCGGACTGCTAGTCAACAAGGCTCTGGAAAAGTTGGCAGATGGAAAATCAATTTCATGTCTACCCAGAAGTATGTTTTTGGATATCTTCCTTTTCTTTTCATTATTAAGAAGTTAGCATGGTTCACCAATATTAGTCTATTTTTAGCCAGCACAAAATCCTGCAGGACTTTGTACAGTAATTACAATATACAAACTCATCTACCTTATCCTTCTGTCCTGTACTAAACAAGAAGAAACAAAGAGAAAACCTTAAAGAAAGTTTTGACAAGTATAGATTATAAGTTTTTTTTCCCGTTAAAAGACTATAATTTTAATTGTGCCTAGGTCTCAAAATACAATGTTTGACTATGAAATTTGGACCACAACAGGTTGTTTGGTTTGTGAAGGTTAAAGAGATTGTGAACTTATTTTCCTCTAGTGGTTCATATAATTATAGAGATCTGGACATTGGTGTCTTCCTTTTTATCTACTCCCTTTGAACCATTTCATATGTCACCGTTTGACTTGGCATGGTGCTTAAGAAAAAAAGGACTTTTGAAATTTGTGGTCTAAAACAATCTTAGAACATTTGTGTGACCTTAAATCATTTCATTAAGGTAAAAGGGGAATTTTAAATTAAATTGTTTCCAATTATAGTAAGGTGACACTCTTTTTGGGACGGACTTAAAAGTAAAGGGTGGAAAGGGTTCCACATAAAATGGGACTGGGGAGTATCATTTAATACAATGTTGGTGCATCTGATTATGGGGTTTTTTTGGTCGTGGAGGGAGGTAATTAGGAAGGTATATTGGTTTTGACAACGCCAAAACTCTCGGGTTCATAAAAAGAAATTACTAATAAGAGTCCAGAGTTCTTCCTATGCTGTAAAGATCAATTATTGATTAACTTTAAACTTCAATAGAGAATGAACCCCATTCATTGAATTCAGCTTAGCCAGACGGTGTTTCTTCGAGTTTACTTAAGTAGAAAAATTGCTGATTGTTGATGAAAAAAATGTATATTCATATCAGAAGATGCTGAGAGAGAAGCACTCATAATTTATGGCCATGGTAAAAGTTTTGTACTCTCCTCTATGCGAATCAAACTATTTTATCCTGGGTAATTTCATGGATGGTCATCCAACTAAAAATCTTAGTGCACCAAAGCTATAAAATTAATTTTTGTAATGGAAAATGACTCTTAACTATGCGCAAATATCACATTAAATAAAAAACAATAATAATGCTAGAATCTGGTCATAGAAAACACAAGTAGGTTGCTAAATTGTATGAAATTTCTATACAAGTACAACCACGTCAGCAACTCAACCCTTAGATAATATCTACGTGGTGCTACCTAAATGAACAATTTTTTTCCGATCCAACTTACTACCCGACATCTTTACTGTGTGAGCCATCATTTTTTAGGACAGATTTATATTCTTGTAAGTGGTGTCACGTGGATATTATGTAAGATTAGTTGCTGAAATGACAACCTACTTGTGTTTCCAGACTCATTTTAGCATCTCTCGCTTTTTTTTTAAAAAAAAAATTCTACGTATATCCTATATTAGCCGAATGGAGTTTTCATGTTATTACAGTTAGTTATATTACTTTGGTGCAATAAATTGGAAGTTGGATGACAACGTATGAATTTAGCTATTTTGTTCTAATTATTGCAATTCCCTGTATCTTTAAGATTTGAGGAATAAAAGTTTATTTTTAAGGCGGATTGTTTGGCGACATAGCATCACTAAATTTTTCTTTCTTCTCTTTATGTAGATGGGAGAATCCATTGATGGGGTGGACATCCACAGGGGATCCATATGCCAATGTTGGTGATTCAGCTCTTAGTTTTGAGAGTGAAGAAGCTGCAAAAGCATTCGCTGAAAAGCATGGTTGGGAATATACGGTACATCATTGAGTTTCTTAAACTCCTGTTGTGTTTTCCGGTAGCTGAATGAACTTTGTTAATTCCAATTTCTTAAGTATTCTGGAATTAACAGAAGAAACTTATACTAGAAGCATGGGCCAAGAAGGGTGGGGGTGAGTGGAGATTGCCCCCTTCCCTGTTGCATGATATAATCAAAGGTCTTTAAATGCTCCATATCTGGGAAGTTTGAATTAGTCTAGGATTTTCGGTTTTGACACCTAAAAGCTCTTTGACCCCGCTCCACCGATCATGAACAGGTTCTTAAAATACTCCATGTTAGGAAAAGGCATGAATTAGGATGTTATTTTAGGTTTTGGCTCCTCTAAAAACTCTGACCATTCAAGCCTTCTAATCCTCTATGCAAACTCAATGTCCTTTCAATCTGACATGTTATGTGCTGTGAAATAATCATTTAATGCCTCACATATTCAAGTCCGACTTCAATTTGGTAATACTGTATTAAAATATTGATAAGTTGGGACAAATCTCAGTTTTTCTAACAGACAGACAAACAACAACTAAAGTTTCATATCACAAACAAGAAAACCAAAAACCCAGATGTAAATTCAAGATTTTGCAGTTTACAACAGTAACACATTCTCAATGAAATCCCACTAAGTGGGGAGCATCAAGCTTTAAGCTAAACATTCTGGTTTATATTATATTAAGAGATAAACAGAATCACCTTTCATTTTTGGTTTCAACGAGATGCTTATGCGGTACACCTTTTTTTTTTTTGGTTCTGCAGGTGAAGAAACGACACACACCATTGTTAAAGGTCAGTCTATACTGTAATCTGATTTAGACATCTAGTCTAGTTTATTTCCTCTTGGGATTGTGAAAACTCATGTTCCCTTGTTTGCTTAGGAAATTGAAGTAGCTGTCTGTAGACACAGTATAGGGAGATAACTATCACCTCATGAATTTTTTGGTGCCACCTTTACCGATTTAAAAGCCTAGATTGTTTTCCTGTTTTTTTGAAAGGACCTTTCTATCACACACAATTCCAAGTTCCTCTCATATCTGCAGATATACCAAGGCAAGAAACATTCTAGTTTTGATGTTGTAATGCTGTCGCAAAGGAATTGATCAAAACTTTTAAACTACAAGCACTTTAAAGTTTTCAAAAATAATTTAATTATTGACTGGCTCAAAGGATAGCATATATTCGTTGAACGCGCGCACAACCAAAACCTAACACAAGGGCCTTCAGTTATCTGTGTTTAACTTTCTTTATAACCTGCCATATGTTTTGCAGATCAAGTCATATGCGGACAACTTTAAGTGGAAGGGACCTCCCAAGGCAGCAGAATAATTTATTTTCTACTTCAATTCAAGTACTTGAGGTGCTTGTGGATGTTCTACCTAATGCCCTGCATTCTGTTTTCTTTTTTTTTTTACCTTCTCTAAAGTTGGGCAGATCTCCTTCTTGAAGGATTTAATAAATCAAACTTATGAAAATCCACAAGTACATGCAATGTCTTAAAACCTTTGTGAAGCAATTTCCGGGTGTTTCTGTACTTGTGGGACATTGTGTCGTGTCAAAACACTAGTAGCCTTGTTTTTCTCTCCAAAAGAAATTAGCGTGTCAAAATACTTACGAACTGTGA-TTGTCGGTTGAGTTTGTT</genome_strand>
        <mrna_strand>GGGCAAATGGCTAGCTCTCTCCGACGACTAGCGACGCATTCCTCTCAAGCCGCCTGGCGATCTTCTGTGACGCCGCTATGTAGACAATTTGCGTCAGAAGCGTTGGTCGAAATCAAGCCCGGAGAGATCGGTATGGTCTCTGGTATTCCAGATGAACATCTTCGTAGAAGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTGATTTTCTCTCCTGCTCGGACTGCTAGTCAACAAGGCTCTGGAAAAGTTGGCAGATGGAAAATCAATTTCATGTCTACCCAGAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGGAGAATCCATTGATGGGGTGGACATCCACAGGGGATCCATATGCCAATGTTGGTGATTCAGCTCTTAGTTTTGAGAGTGAAGAAGCTGCAAAAGCATTCGCTGAAAAGCATGGTTGGGAATATACG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAAGAAACGACACACACCATTGTTAAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAAGTCATATGCGGACAACTTTAAGTGGAAGGGACCTCCCAAGGCAGCAGAATAATTTATTTTCTACTTCAATTCAAGTACTTGAGGTGCTTGTGGATGTTCTACCTAATGCCCTGCATTCTGTTTTCTTTTTTTTTTTACCTTCTCTAAAGTTGGGCAGATCTCCTTCTTGAAGGATTTAATAAATCAAACTTATGAAAATCCACAAGTACATGCAATGTCTTAAAACCTTTGTGAAAGCATTTCCGGGGTGTTCTGTACTTGTGGGACATTGTGTCGTGTCAAAAC-CTAGTAGCCTTG-TTTTCTCTCC-AAAGAAATTAGCGTGTC-AAATACTTACG-ACTGTGATTTGTCGG-TGAGTTTGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0030E13-j0fao/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U592850" ref_strand="+" ref_description="SGN-U592850 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>gctctctccgacgactagcgacgcattcctctcaagccgcctggcgatcttctgtgacgccgctatgtagacaatttgcgtcagaagcgttggtcgaaatcaagcccggagagatcggtatggtctctggtattccagatgaacatcttcgtagaagggtataatttcttttctttatgtctcttcgctaatatctattattttgtcaggtcatttaggtgtatgaaaaacttcattgtaggttaccaatttattagggcttctatagcagatccatgggttccgctatttagggttagcaaatgatttgggaaatggatatggaggatccatatagttagaatcaattgatttgaaattgatatagttgattgattgcttttcatttttgcctttgtgaatttatgttacctctaatccgaagactattcctttttagccctccttttgtcttcctcgctcctattcaatgatatagaagagaccatagctgcttagacacttgtgacaagtaaaaagttgtaagttttcatggtagggagtagtttctgcttggcaagtattaagttgaacttggaccttctagagcttgaattgataagccttaatatcagaccccagcttgnattaatgnaaactttttccccacggaggtttttcatccntttctgcacaaatttagttnatatagatttcttatcaaatctataatctgatctatatcatctata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0030E13-j0fao/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0030E13.1" temp_strand="+" temp_description="C02HBa0030E13.1  AC226502.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0030E13 sequenced_by:kribb upload_account_name:korea">
        <position start="37560" stop="38889"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="37860" g_stop="38589" g_length="730"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="731" r_length="731" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0030E13.1" gen_strand="+" ref_id="SGN-U592850" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>730</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0030E13.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U592850" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="37860" e_stop="38589"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTCTCTCCGACGACTAGCGACGCATTCCTCTCAAGCCGCCTGGCGATCTTCTGTGACGCCGCTATGTAGACAATTTGCGTCAGAAGCGTTGGTCGAAATCAAGCCCGGAGAGATCGGTATGGTCTCTGGTATTCCAGATGAACATCTTCGTAGAAGGGTATAATTTCTTTTCTTTATGTCTCTTCGCTAATATCTATTATTTTGTCAGGTCATTTAGGTGTATGAAAAACTTCATTGTAGGTTACCAATTTATTAGGGCTTCTATAGCAGATCCATGGGTTCCGCTATTTAGGGTTAGCAAATGATTTGGGAAATGGATATGGAGGATCCATATAGTTAGAATCAATTGATTTGAAATTGATATAGTTGATTGATTGCTTTTCATTTTTGCCTTTGTGAATTTATGTTACCTCTAATCCGAAGACTATTCCTTTTTAGCCCTCCTTTTGTCTTCCTCGCTCCTATTCAATGATATAGAAGAGACCATAGCTGCTTAGACACTTGTGACAAGTAAAAAGTTGTAAGTTTTCATGGTAGGGAGTAGTTTCTGCTTGGCAAGTATTAAGTTGAACTTGGACCTTCTAGAGCTTGAATTGATAAGCCTTAATATCAGACCCCAGCTTGGATTAATGCAAACTTTTTCCCCACGGAGGTTTTTCATCCATTTCTGCACAAATTTAGTT-ATATAGATTTCTTATCAAATCTATAATCTGATCTATATCATCTATA</genome_strand>
        <mrna_strand>GCTCTCTCCGACGACTAGCGACGCATTCCTCTCAAGCCGCCTGGCGATCTTCTGTGACGCCGCTATGTAGACAATTTGCGTCAGAAGCGTTGGTCGAAATCAAGCCCGGAGAGATCGGTATGGTCTCTGGTATTCCAGATGAACATCTTCGTAGAAGGGTATAATTTCTTTTCTTTATGTCTCTTCGCTAATATCTATTATTTTGTCAGGTCATTTAGGTGTATGAAAAACTTCATTGTAGGTTACCAATTTATTAGGGCTTCTATAGCAGATCCATGGGTTCCGCTATTTAGGGTTAGCAAATGATTTGGGAAATGGATATGGAGGATCCATATAGTTAGAATCAATTGATTTGAAATTGATATAGTTGATTGATTGCTTTTCATTTTTGCCTTTGTGAATTTATGTTACCTCTAATCCGAAGACTATTCCTTTTTAGCCCTCCTTTTGTCTTCCTCGCTCCTATTCAATGATATAGAAGAGACCATAGCTGCTTAGACACTTGTGACAAGTAAAAAGTTGTAAGTTTTCATGGTAGGGAGTAGTTTCTGCTTGGCAAGTATTAAGTTGAACTTGGACCTTCTAGAGCTTGAATTGATAAGCCTTAATATCAGACCCCAGCTTGNATTAATGNAAACTTTTTCCCCACGGAGGTTTTTCATCCNTTTCTGCACAAATTTAGTTNATATAGATTTCTTATCAAATCTATAATCTGATCTATATCATCTATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0030E13-j0fao/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U587683" ref_strand="+" ref_description="SGN-U587683 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|30681866|ref|NP_179875.2| (e_value=7e-22) GCN5-related N-acetyltransferase (GNAT) family [Arabidopsis thaliana]; (*ATH) AT2G22910.1 (e_value=8e-24)  Symbol: None | GCN5-related N-acetyltransferase (GNAT) family protein / amino acid kinase family protein, similar to SP:P08205 Amino-acid acetyltransferase (EC 2.3.1.1) (N-acetylglutamate synthase) {Escherichia coli}; contains Pfam profiles PF00696:... ; ">
      <seq>gcttggattgcaaatgctcttccttctaacaactcgcacagctgattggtttgtgaggcgtggcttttctgaatgttccattgatcatataccagagcaaagaaggaaaaagatcaatctcgcccgtagatcaaagtattacatgaagaagctgctacccgataaaagtggtatacgtatcgattgcaccttcgcgtaggaattgaaggtttttcatctgtctgtgtactagctctgcaacaagctcgtatttagtcaaccagaaaatcaaccaattgttcctgacaactcaagtcatatataggggggagattaatctttgttgttactgcctgctattatcttttgcggtaggtttggaagagtattttgatcgacgatgtatgcttatatctacgttaattgatcttcaaatagcggacacccctttgttatcttttctttgtgggttcttggtcaaaatgtttcaaaaaagtaagttttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0030E13-j0fao/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0030E13.1" temp_strand="-" temp_description="C02HBa0030E13.1  AC226502.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0030E13 sequenced_by:kribb upload_account_name:korea">
        <position start="45023" stop="42789"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="44724" g_stop="44677" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="48" r_length="48" r_score="0.979"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="44676" i_stop="43525" i_length="1152">
            <donor d_prob="0.993" d_score="0.98"/>
            <acceptor a_prob="0.604" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="43524" g_stop="43089" g_length="436"/>
          <reference_exon_boundary r_type="cDNA" r_start="49" r_stop="484" r_length="436" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0030E13.1" gen_strand="-" ref_id="SGN-U587683" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>484</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0030E13.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U587683" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="44724" e_stop="44677"/>
          <exon e_start="43524" e_stop="43089"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTTGGATTGCAAATGCTCTTCCTTCTAACAACTCGCACAGCTGATTGGTACTCTCCTCTCACATTTCTACCTTTTATTCCCATGGCATTTAGTAGTTTACTGATAGTACCATACAATTCTACTTTCAATTAAGCAAGTGAACATAGTTTGTCCAAGTAGAGGTTTGGACACTTAACTAATTGACAATCGCGCAATGACAGCTTAGAGTAATGTAAATAAAACAAATTTGTGATGTTTGAGCTGAATTTGAGTATGTTTGACATCTTAACAAGAAGAAAAATAGATTGAAAGACCAACATAGGTGTTTTAAATAAGACAGACACTTGCCTAAAAGAACAAAAAAATGTTTCTATTGATTTTGATTTACTACACATAATTATTTGGATTTCACTCTACTGTTATTTATTTAGGGTGCATGGACACTAACATATGTGTTAGGCAACTACTTGGAACTTTTGTTACATTTACAGCATATCTCCTATATTCCTCGTTCTTTTTTGCTCAGAAGTAAAAAAGTAGTTTTGGCTTCTTCATATATTCTTGTTGAGTCTTCATAAAGTGTGCTCAAAAGTCGCATCTCTTATAGACATTAGTTGTCTGTTATTCATTAACCGAGGAGACAAGTGTACGTTTCTAAGACGGAAAAGAAATCAAAGTACACGATGCTCATTGTTTAAATAAGAGGATAGCAATAATGTTGTTAAATCCAGACCTCTAAAGAAAAGAAAAACATGAACACTTGATTGATGCAAAAAGCTAACACAGGTCAGACCAAGAGGAGAAGAAGAGAGCTGGCTGTAACTTGATTCGCTTGAATGCTTATAAAAGTCAAAAAGGCTTTCAAGTGACCTTCAATTGATCAGCGAGCTTATTGGTCATGATAACTTGATATTCACATGTTATGCAGTTTTATATTCGAGAGATCAGTCCCAGCTTGCTAATCCATAAATTTTGAATATATTTTTTTTGTCTACCTCTTGCATCAATTAAGTTACTTATTAAAGTTCTTCATTTTATTTGTCCATATCTTCATATACAAGGTTTGTGGTTGCAAGACTTAGATAATGAGTATTTCTGCAATAAATGAACGTTGGATGAATCATATTCACCTTCCTCAACGTTACTAAAGGTGGAAAACCACCTTCTTAATTCTTTAAGCGAGTCCGATATTTCATTGATGCCAAGATTATTTGTCACAGGTTTGTGAGGCGTGGCTTTTCTGAATGTTCCATTGATCATATACCAGAGCAAAGAAGGAAAAAAATCAATCTCGCCCGTAGATCAAAGTATTACATGAAGAAGCTGCTACCCGATAAAAGTGGTATACGTATCGATTGCACCTTCGCGTAGGAATTGAAGGTTTTTCATCTGTCTGTGTACTAGCTCTGCAACAAGCTCGTATTTAGTCAACCAGAAAATCAACCAATTGTTCCTGACAACTCAAGTCATATATAGGGGGGAGATTAATCTTTGTTGTTATTGCCTGCTATTATCTTTTGCGGTAGGTTTGGAAGAGTATTTTGATCGACGATGTATGCTTATATCTACGTTAATTGATCTTCAAATAGCGGACACCCCTTTGTTATCTTTTCTTTGTGGGTTCTTGGTCAAAATGTTTCAAAAAAATAAGTTTTT</genome_strand>
        <mrna_strand>GCTTGGATTGCAAATGCTCTTCCTTCTAACAACTCGCACAGCTGATTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTGTGAGGCGTGGCTTTTCTGAATGTTCCATTGATCATATACCAGAGCAAAGAAGGAAAAAGATCAATCTCGCCCGTAGATCAAAGTATTACATGAAGAAGCTGCTACCCGATAAAAGTGGTATACGTATCGATTGCACCTTCGCGTAGGAATTGAAGGTTTTTCATCTGTCTGTGTACTAGCTCTGCAACAAGCTCGTATTTAGTCAACCAGAAAATCAACCAATTGTTCCTGACAACTCAAGTCATATATAGGGGGGAGATTAATCTTTGTTGTTACTGCCTGCTATTATCTTTTGCGGTAGGTTTGGAAGAGTATTTTGATCGACGATGTATGCTTATATCTACGTTAATTGATCTTCAAATAGCGGACACCCCTTTGTTATCTTTTCTTTGTGGGTTCTTGGTCAAAATGTTTCAAAAAAGTAAGTTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0030E13-j0fao/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U565023" ref_strand="-" ref_description="SGN-U565023 Tomato 200607#2 [2 ESTs aligned] (*GB) gi|157328201|emb|CAO17674.1| (e_value=7e-75) unnamed; (*ATH) AT2G22910.1 (e_value=3e-74)  Symbol: None | GCN5-related N-acetyltransferase (GNAT) family protein / amino acid kinase family protein, similar to SP:P08205 Amino-acid acetyltransferase (EC 2.3.1.1) (N-acetylglutamate synthase) {Escherichia coli}; contains Pfam profiles PF00696:... ; (*SWP) sp|A4XP61|ARGA_PSEMY (e_value=7e-36) Amino-acid acetyltransferase OS=Pseudomonas mendocina (strain ymp) GN=argA; ">
      <seq>ttgggacaatggtgnctagcgatctttatgaaggagcacggatggccagggtgtctgatgttcctggaataaagcagttgttacaaccgctggaagagtctggaacattgatcagaaggactgaggaagagctggtgaaagcactgcattcattcattattgtggagagagagggtcatattatagcatgtgcagctctctttccttactttgaagaaaaatgtggggaggttgctgctattgctgtttctcctgattgtcgtggccaaggacagggagacaagttactcgattatattgaaaagaaagcatcttctcttggattgcaaatgctcttccttctaacaactcgcacagctgattggtttgtgaggcgtggcttttctgaatgttccattgatcatataccagagcaaagaaggaaaaagatcaatctcgcccgtagatcaaagtattacatgaagaagctgctacccgataaaagtggtatacgtatcgattgcaccttcgcgtaggaattgaaggtttttcatctgtctgtgtactagctctgcaacaagctcgtatttagtcaaccagaaaatcaaccaattgttcctgacaactcaagtcatatataggggggagattaatctttgttgttattgcctgctattatcttttgcggtaggtttgcaagagtattttgatcgacgatatatgcccatatctacgttaattgatcttcaagataaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0030E13-j0fao/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0030E13.1" temp_strand="-" temp_description="C02HBa0030E13.1  AC226502.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0030E13 sequenced_by:kribb upload_account_name:korea">
        <position start="45873" stop="42857"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="45564" g_stop="45453" g_length="112"/>
          <reference_exon_boundary r_type="cDNA" r_start="20" r_stop="131" r_length="112" r_score="0.973"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="45452" i_stop="45344" i_length="109">
            <donor d_prob="0.958" d_score="0.96"/>
            <acceptor a_prob="0.980" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="45343" g_stop="45184" g_length="160"/>
          <reference_exon_boundary r_type="cDNA" r_start="132" r_stop="291" r_length="160" r_score="0.994"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="45183" i_stop="44750" i_length="434">
            <donor d_prob="0.986" d_score="0.98"/>
            <acceptor a_prob="0.987" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="44749" g_stop="44677" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="292" r_stop="364" r_length="73" r_score="0.986"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="44676" i_stop="43525" i_length="1152">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.604" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="43524" g_stop="43160" g_length="365"/>
          <reference_exon_boundary r_type="cDNA" r_start="365" r_stop="729" r_length="365" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0030E13.1" gen_strand="-" ref_id="SGN-U565023" ref_strand="-">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>710</cumulative_length_of_scored_exons>
        <coverage percentage="0.959" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0030E13.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U565023" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="45564" e_stop="45453"/>
          <exon e_start="45343" e_stop="45184"/>
          <exon e_start="44749" e_stop="44677"/>
          <exon e_start="43524" e_stop="43160"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGATCTTTATGAAGGAGCACGGATGGCCAGGGTGTCAGATGTTCCTGGAATAAAGCAGTTGTTACAACCTCTGGAAGAGTCTGGAACATTGATCAGAAGAACTGAGGAAGAGGTTACACCTAATGCTTGTCATTGTTCAAATTTATCTAGTCAGCTTCTGTTTTATCTTTGTTGGCTTATGTTTCTTTAACCATAATCTATTATTGCTTAACTTGTTCTAGCTGGTGAAAGCACTGCATTCATTCATTATTGTGGAGAGAGAGGGTCATATTATAGCATGTGCAGCTCTCTTTCCTTACTTTGAAGAAAAATGTGGGGAGGTTGCTGCTATTGCTGTTTCTCCGGATTGTCGTGGCCAAGGACAGGGAGACAAGTTACTCGGTATGGTGACTCTTTTCTCATAATAAAACCATTTATTCTTCCACATTGAAGACATATGAGCACCTTCGAGGATATTTTATTTCCTATTTAATCCATATTGAAATTGCAAGCACATTAGCAAGAGAGTACTAGTATGTGTGTCCCAAGGACCACCGCCTGGTCCATTATGGAATGACCTTATAACCATGAAATCTGACTCGATTATCAGATTCTGAGCCTTTTGTGGCAAGCGTTTAGAAATTGCTAATATAGAGATACTTTTGTCAAAATAGCTCTTCAGAGAATTATTTTGGAGAGAAGCAGTTTGTCTTTGGCTAATTCATTTGAGAAGTACTTCCTATCGTATTTGATAAATGGATATTTGGACGATCTTTTTTAATAGTGATGTTGAGCATCTGTATTTACCAATAACTTTGTATTCCAAAATTTTGCAGATTACATTGAAAAGAAAGCATCTTCTCTTGGATTGCAAATGCTCTTCCTTCTAACAACTCGCACAGCTGATTGGTACTCTCCTCTCACATTTCTACCTTTTATTCCCATGGCATTTAGTAGTTTACTGATAGTACCATACAATTCTACTTTCAATTAAGCAAGTGAACATAGTTTGTCCAAGTAGAGGTTTGGACACTTAACTAATTGACAATCGCGCAATGACAGCTTAGAGTAATGTAAATAAAACAAATTTGTGATGTTTGAGCTGAATTTGAGTATGTTTGACATCTTAACAAGAAGAAAAATAGATTGAAAGACCAACATAGGTGTTTTAAATAAGACAGACACTTGCCTAAAAGAACAAAAAAATGTTTCTATTGATTTTGATTTACTACACATAATTATTTGGATTTCACTCTACTGTTATTTATTTAGGGTGCATGGACACTAACATATGTGTTAGGCAACTACTTGGAACTTTTGTTACATTTACAGCATATCTCCTATATTCCTCGTTCTTTTTTGCTCAGAAGTAAAAAAGTAGTTTTGGCTTCTTCATATATTCTTGTTGAGTCTTCATAAAGTGTGCTCAAAAGTCGCATCTCTTATAGACATTAGTTGTCTGTTATTCATTAACCGAGGAGACAAGTGTACGTTTCTAAGACGGAAAAGAAATCAAAGTACACGATGCTCATTGTTTAAATAAGAGGATAGCAATAATGTTGTTAAATCCAGACCTCTAAAGAAAAGAAAAACATGAACACTTGATTGATGCAAAAAGCTAACACAGGTCAGACCAAGAGGAGAAGAAGAGAGCTGGCTGTAACTTGATTCGCTTGAATGCTTATAAAAGTCAAAAAGGCTTTCAAGTGACCTTCAATTGATCAGCGAGCTTATTGGTCATGATAACTTGATATTCACATGTTATGCAGTTTTATATTCGAGAGATCAGTCCCAGCTTGCTAATCCATAAATTTTGAATATATTTTTTTTGTCTACCTCTTGCATCAATTAAGTTACTTATTAAAGTTCTTCATTTTATTTGTCCATATCTTCATATACAAGGTTTGTGGTTGCAAGACTTAGATAATGAGTATTTCTGCAATAAATGAACGTTGGATGAATCATATTCACCTTCCTCAACGTTACTAAAGGTGGAAAACCACCTTCTTAATTCTTTAAGCGAGTCCGATATTTCATTGATGCCAAGATTATTTGTCACAGGTTTGTGAGGCGTGGCTTTTCTGAATGTTCCATTGATCATATACCAGAGCAAAGAAGGAAAAAAATCAATCTCGCCCGTAGATCAAAGTATTACATGAAGAAGCTGCTACCCGATAAAAGTGGTATACGTATCGATTGCACCTTCGCGTAGGAATTGAAGGTTTTTCATCTGTCTGTGTACTAGCTCTGCAACAAGCTCGTATTTAGTCAACCAGAAAATCAACCAATTGTTCCTGACAACTCAAGTCATATATAGGGGGGAGATTAATCTTTGTTGTTATTGCCTGCTATTATCTTTTGCGGTAGGTTTGGAAGAGTATTTTGATCGACGATGTATGCTTATATCTACGTTAATTGATCTTCAA</genome_strand>
        <mrna_strand>CGATCTTTATGAAGGAGCACGGATGGCCAGGGTGTCTGATGTTCCTGGAATAAAGCAGTTGTTACAACCGCTGGAAGAGTCTGGAACATTGATCAGAAGGACTGAGGAAGAG.............................................................................................................CTGGTGAAAGCACTGCATTCATTCATTATTGTGGAGAGAGAGGGTCATATTATAGCATGTGCAGCTCTCTTTCCTTACTTTGAAGAAAAATGTGGGGAGGTTGCTGCTATTGCTGTTTCTCCTGATTGTCGTGGCCAAGGACAGGGAGACAAGTTACTCG..................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTATATTGAAAAGAAAGCATCTTCTCTTGGATTGCAAATGCTCTTCCTTCTAACAACTCGCACAGCTGATTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTGTGAGGCGTGGCTTTTCTGAATGTTCCATTGATCATATACCAGAGCAAAGAAGGAAAAAGATCAATCTCGCCCGTAGATCAAAGTATTACATGAAGAAGCTGCTACCCGATAAAAGTGGTATACGTATCGATTGCACCTTCGCGTAGGAATTGAAGGTTTTTCATCTGTCTGTGTACTAGCTCTGCAACAAGCTCGTATTTAGTCAACCAGAAAATCAACCAATTGTTCCTGACAACTCAAGTCATATATAGGGGGGAGATTAATCTTTGTTGTTATTGCCTGCTATTATCTTTTGCGGTAGGTTTGCAAGAGTATTTTGATCGACGATATATGCCCATATCTACGTTAATTGATCTTCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0030E13-j0fao/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U565025" ref_strand="+" ref_description="SGN-U565025 Tomato 200607#2 [11 ESTs aligned] (*GB) gi|40538903|gb|AAR87160.1| (e_value=3e-145) putative amino-acid N-acetyltransferase [Oryza sativa (japonica cultivar-group)]; (*ATH) AT2G22910.1 (e_value=2e-144)  Symbol: None | GCN5-related N-acetyltransferase (GNAT) family protein / amino acid kinase family protein, similar to SP:P08205 Amino-acid acetyltransferase (EC 2.3.1.1) (N-acetylglutamate synthase) {Escherichia coli}; contains Pfam profiles PF00696:... ; (*SWP) sp|Q4K434|ARGA_PSEF5 (e_value=5e-39) Amino-acid acetyltransferase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=argA; ">
      <seq>gtttgatgttttagaaggctagatagagtatgatatttagaaaaaaaatagggctgccgactgacggccaaagttattattgaacatatgcaccagtcaaacatatacgtggcgagtcgttggttaccggtataaattcttccaactccacctacccccaacgccaccccattcaccaggcagctgccatagcccgctgccgtcaaaaagcccactacagtatcggagttcggcgtgcatttgcttgctcaaacctgagcgaccatggctgctttttgtggcaacagtatttggactcctcaagctcgaaattgttttcagcggggaataacttgttctaattcgttaaagtttttaccttttcaatttagttgttgtaagagattgtggggtaggtcattgaagtgcagggttttgggcgaaacggacgatgtgggatttgaagtgagtagtgccataaaagacgacctatttgttggttttttcagagaagcatggccttattttcttgcacatcgaggaagcacgtttgttgttttaatctcagctgaaattgttgatagccctcatttggatcatcttctcatggatatctcccttcttcatggtctgggaatcaaatttgttcttgtgccaggaactcatgttcagattgaccggcttctgactgaaaggggaagtgaggccaagtatgtaggccgctacagaattacagaccctgattcactcgaggcagctatggatacatctggaagaattcgtcttatgatagaggcaaagttgtcacctggcccttcattgactggtgtccgccgacatggagataatagtcgctggcatgatagtgttggtgttgccagtggtaattttctatcagcgaagaaaagaggagttgttgaaggaattgattatgcttcaactggtgaagtaaagaagatagatgtttctcgaattcgcgagaggcttgatcacgattccatagtgctattgagcaatcttggttattccagctctggagaagtattaaactgcaacacatacgaagttgcaacagcttgtgccttagctctaggagcagaaaaactaatttgtatcatagacggcccaattcttgatgagtcgagccgtctcattcgtttcttaactcttcaagatgctgatatgctggtccgcagacgagctgagcaaagtgagactgctgctaattatgtaaaagctgttagtcaggaggacttcaatcgtttaagttaccatggttccaatggatcgctcccttcccaaaatggcgatgtttatagccaaagatataatccgacatttcagaatggcattggttttgacaatggaaatgggctttggtctagtgaacaaggttttgccattggaggacaagagaaactaagccgatcaaatggttatctctcagaattagctgctgctgcttttgtttgccgaggaggtgttcaaagagtgcacctgctggatggcactattggtggagttttattaaaggaattgttccaaagagatggagttgggacaatggttgctagcgatctttatgaaggagcacggatggccagggtgtcagat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0030E13-j0fao/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0030E13.1" temp_strand="-" temp_description="C02HBa0030E13.1  AC226502.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0030E13 sequenced_by:kribb upload_account_name:korea">
        <position start="50146" stop="45225"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="49846" g_stop="49259" g_length="588"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="588" r_length="588" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="49258" i_stop="49155" i_length="104">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="49154" g_stop="49067" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="589" r_stop="676" r_length="88" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="49066" i_stop="48520" i_length="547">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.972" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="48519" g_stop="48314" g_length="206"/>
          <reference_exon_boundary r_type="cDNA" r_start="677" r_stop="882" r_length="206" r_score="0.995"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="48313" i_stop="48145" i_length="169">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.973" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="48144" g_stop="47993" g_length="152"/>
          <reference_exon_boundary r_type="cDNA" r_start="883" r_stop="1034" r_length="152" r_score="0.980"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="47992" i_stop="47153" i_length="840">
            <donor d_prob="0.458" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="47152" g_stop="46732" g_length="421"/>
          <reference_exon_boundary r_type="cDNA" r_start="1035" r_stop="1455" r_length="421" r_score="0.995"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="46731" i_stop="46224" i_length="508">
            <donor d_prob="0.974" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="46223" g_stop="46126" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="1456" r_stop="1553" r_length="98" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="46125" i_stop="45565" i_length="561">
            <donor d_prob="0.921" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="45564" g_stop="45525" g_length="40"/>
          <reference_exon_boundary r_type="cDNA" r_start="1554" r_stop="1593" r_length="40" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0030E13.1" gen_strand="-" ref_id="SGN-U565025" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>1593</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0030E13.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U565025" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="49846" e_stop="49259"/>
          <exon e_start="49154" e_stop="49067"/>
          <exon e_start="48519" e_stop="48314"/>
          <exon e_start="48144" e_stop="47993"/>
          <exon e_start="47152" e_stop="46732"/>
          <exon e_start="46223" e_stop="46126"/>
          <exon e_start="45564" e_stop="45525"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTGATGTTTTAGAAGGCTAGATAGAGTATGATATTTAGAAAAAAAATAGGGCTGCCGACTGACGGCCAAAGTTATTATTGAACATATGCACCAGTCAAACATATACGTGGCGAGTCGTTGGTTACCGGTATAAATTCTTCCAACTCCACCTACCCCCAACGCCACCCCATTCACCAGGCAGCTGCCATAGCCCGCTGCCGTCAAAAAGCCCACTACAGTATCGGAGTTCGGCGTGCATTTGCTTGCTCAAACCTGAGCGACCATGGCTGCTTTTTGTGGCAACAGTATTTGGACTCCTCAAGCTCGAAATTGTTTTCAGCGGGGAATAACTTGTTCTAATTCGTTAAAGTTTTTACCTTTTCAATTTAGTTGTTGTAAGAGATTGTGGGGTAGGTCATTGAAGTGCAGGGTTTTGGGCGAAACGGACGATGTGGGATTTGAAGTGAGTAGTGCCATAAAAGACGACCTATTTGTTGGTTTTTTCAGAGAAGCATGGCCTTATTTTCTTGCACATCGAGGAAGCACGTTTGTTGTTTTAATCTCAGCTGAAATTGTTGATAGCCCTCATTTGGATCATCTTCTCATGGTATGATTGTCTTCTTTTTTCTTTTCTTGTTCCTTAATTTCATTTTAATTGTCAGAGGTGCTGTTTGTTAGCTTTAGATAATCTTTTCTGCTGAATTATTGCAGGATATCTCCCTTCTTCATGGTCTGGGAATCAAATTTGTTCTTGTGCCAGGAACTCATGTTCAGATTGACCGGCTTCTGACTGAAAGGGGTGAGTGAAATTCTGATATATTCTATTTTTATGTTATTTCTTGTTATGGACAATGTAAATGTTTTTTTCTCTATTTCTGATATCGAGAGCAGGTATTTGTTAGTATTACTGTTTGAAATAAATATGTTATTCCTCTTTGCTGCTAACAGTTTTAGCATCATTTAGATACCTTATATATCAGAATTTATGATTTCTAAATCGAAGGTTATCTTTTTTTAGGAATTTCAGTTTTCATTCTCATTGTCTCAGAATGATTTTCTTTTCTAAAGATGCTAATGAAGTAATGCTGATTAGGACCAGTGGGGTTAAGTAGGTATGCACTTCTGTGTTCTCCTTTAGGCGATGGTATATGCTGGTATATGCGTCATTTGTATTTCAGAATAAATAAAAGTTGTAAAGGAACTCTACAGCTTTAATGTTAAATGGCATCGACATTTAATTTTGATTACTATATCTTCTTTTCTTTTGTTTCCAAATACTGATTTCATTTATCTTCTTACAAGAATATTCTAAGAAGCAAGCGATTTTTGTAACTTCTATTTAACAGGAAGTGAGGCCAAGTATGTAGGCCGCTACAGAATTACAGACCCTGATTCACTCGAGGCAGCTATGGATACATCCGGAAGAATTCGTCTTATGATAGAGGCAAAGTTGTCACCTGGCCCTTCATTGACTGGTGTCCGCCGACATGGAGATAATAGTCGCTGGCATGATAGTGTTGGTGTTGCCAGTGGTAATTTTCTATCAGCGAAGGTGCAAATTTGTCACCCACTGCCTGTTCATCTGTTCATTTTTGCTTTCTTTCCAAAACCTACATAAAGTGCCACCTACTCGCTTTACTAGATGTATAATCATTTTGGAGGTTTAAGTTTTATCATATATCTTCCATTGTAATGGTGATTTCATTCCAATTTGCTGGCAGAAAAGAGGAGTTGTCGAAGGAATTGATTATTCTTCAACTGGTGAAGTAAAGAAGATAGATGTTTCTCGAATTCGCGAGAGGCTTGATCAGGATTCCATAGTGCTATTGAGCAATCTTGGTTATTCCAGCTCTGGAGAAGTATTAAACTGCAAGTATGCTATATGACTTTTGATAGGTATTTTTGTTGTTGATTTGCATAAACTGGTGCTGCATAATGTTTACATAATCTGTTATCTCAAATGATAAATGCAGTCCAGACAGCTAGATACTAAAGTTTAATGATTTGCTTCCAGCATCTATTTCAATCAAACTTGTATTTGACATGTCTGGTCTACTCTAATTTATCTAAAATCACTTTGTTACTGTTTAGCTGTTTGACAAGTACTCAAGGGATTTTGTGAAACACATTCACTTGTAAGTTGCACACCTTAAAGTATCCACGTGCATTTAGATACAATTAAAGAAATCTAGAATTTTCACAAGGAAAGTACATTTTTAACCTTCTGCGCTATGTTTTATTCCTTCTATTCAAGTTAGTAGTCTTTTCCTATCTATGAATATGTATAGGTCAAATAAACTTTCATCTATATGAAGGGTGGCATCGCTGGTATTCATTTCATTGAAAGTTAACTTATTTGATGACTTCAAGATACTACAAAATACACTTGGTAAGAGAAAAAGAACTTACTACGGTAAGCTTGTCTGAAGCCACACCTGGTCAGTAGTCAGTTTTATGTCGCTTCAACTCATGTATCATTCACTTCTATCCCTGTAGAGAGATCAGATAATTCATTATGCCACTGGGAGGTGGTTTTTAGGCTTATATTGTATATGTAGATAGCAATTGCTAGTTGATCAGGCTAAATAGTTCTCAGTTTAAAATTTAAAGGTTTGACATGTGCTCTGTTGTTCATGCAACTGTAGCTTCTCTTACCTATTTTATTTTTCTTTGAGTTGTTAAGACTGATGATATGATCCGTTCAAAATTGCAGCACATACGAAGTTGCAACAGCTTGTGCCTTAGCTCTAGGAGCAGAAAAACTAATTTGTATCATAGACGGCCCAATTCTTGATGAGTCGAGCCGTCTGATTCGTTTCTTAACTCTTCAAGATGCTGATATGCTGGTCCGCAGACGAGCTGAGCAAAGTGAGACTGCTGCTAATTATGTAAAAGCTGTTAGTCAGGAGGACTTCAATCGTTTAGGTTACCATGGTTCCAATGGATCGCTCCCTTCCCAAAATGGCGATGTTTATAGCCAAAGATATAATCCGACATTTCAGAATGGCATTGGTTTTGACAATGGAAATGGGCTTTGGTCTAGTGAACAAGGTTTTGCCATTGGAGGACAAGAGAAACTAAGCCGATCAAATGGTTATCTCTCAGAATTAGCTGCTGCTGCTTTTGTTTGCCGAGTAAATTCCTGATAACACAATCAAATTATTTTTTACCATGCTTGATCTTCGTAATGCTAACCTGTTACTGATGAGTCTTGAATATACAAAGGAAGTTTACAGATTATCTTGTAAAATCGCATCTCTTTGTTATTAATTATTTTTTTTTGGGTTCCCACCCGGTGTCTGGAGCCCACATTGTAGCACCGACTAAATTCCGAACGCGCATTGCAGGGCCCATTCAGGGGTTTCGCTCCCAACTAGACTTTCTCCATACCCAAGGCTCAAACCCGAGACCTCTGGTTAAGGCTGATATGTGTGTTTCATGGATAGACAACTCGTTATTTTTACGCTAGTGATTGACATTGTGCAGAATATTATAAATATCCACTCTCCTAGTGTTCTTCCATCTTAATTGCTTTAATGTGGAATTTTTCATTATTAAGAATATTGTTGTCACTTCACTTATTAGCGTGATATCTTTTTCTTGTTGAAACTTATTCAAATAATATATTTCTATTTCCATCAGGGAGGTGTTCAAAGAGTGCACCTGCTGGATGGCACTATTGGTGGAGTTTTATTAAAGGAATTGTTCCAAAGAGATGGAGTTGGGACAATGGTTGCTAGGTATGAATATTCTTAAGAATATTAGTTGTGATTACTGTTTCAAGATCTGTTAATTTAATTGCCAAATTTGGATCGATAGTCCTAGATTCGTCAGACTAATCCTCCTTTGCTTTTATGCTTAAAATACGAGGGTTGGAAGCATAGAGTGCATGTAGAAAACCATGTTATTACTTGGTCCAATTTCTCTGTCAAAAATTGCTTAAATCTCTAAGAGTTGGAAACTTATCGGAATCTACAACTATTGTGCTATTGTTCAATCTGATTTGGACACTTATACTTCATACTTATCAGGAATTTCTGTACAACTCAAAGATCCGGTCATCATCAATAAATAGGTTCAGAAGTTAATGAAATGTTTAACCAGCTCTCTTATCTTTCCAAATGAAACTATCCTCCTTTTACCTTTGGTCAGCAGTATCTTAAAAACTGCACGACCAGTGAGAACCAGGATGTTATCATGACATTGAATATCAATACCCTCCAAAGTTTCCAGGATGTTAAATCTTAGTTTATGCTTATGTTAATCCCATCAGCTAATATGTGCATGAATCTGTGGTCCAGCGATCTTTATGAAGGAGCACGGATGGCCAGGGTGTCAGAT</genome_strand>
        <mrna_strand>GTTTGATGTTTTAGAAGGCTAGATAGAGTATGATATTTAGAAAAAAAATAGGGCTGCCGACTGACGGCCAAAGTTATTATTGAACATATGCACCAGTCAAACATATACGTGGCGAGTCGTTGGTTACCGGTATAAATTCTTCCAACTCCACCTACCCCCAACGCCACCCCATTCACCAGGCAGCTGCCATAGCCCGCTGCCGTCAAAAAGCCCACTACAGTATCGGAGTTCGGCGTGCATTTGCTTGCTCAAACCTGAGCGACCATGGCTGCTTTTTGTGGCAACAGTATTTGGACTCCTCAAGCTCGAAATTGTTTTCAGCGGGGAATAACTTGTTCTAATTCGTTAAAGTTTTTACCTTTTCAATTTAGTTGTTGTAAGAGATTGTGGGGTAGGTCATTGAAGTGCAGGGTTTTGGGCGAAACGGACGATGTGGGATTTGAAGTGAGTAGTGCCATAAAAGACGACCTATTTGTTGGTTTTTTCAGAGAAGCATGGCCTTATTTTCTTGCACATCGAGGAAGCACGTTTGTTGTTTTAATCTCAGCTGAAATTGTTGATAGCCCTCATTTGGATCATCTTCTCATG........................................................................................................GATATCTCCCTTCTTCATGGTCTGGGAATCAAATTTGTTCTTGTGCCAGGAACTCATGTTCAGATTGACCGGCTTCTGACTGAAAGGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGTGAGGCCAAGTATGTAGGCCGCTACAGAATTACAGACCCTGATTCACTCGAGGCAGCTATGGATACATCTGGAAGAATTCGTCTTATGATAGAGGCAAAGTTGTCACCTGGCCCTTCATTGACTGGTGTCCGCCGACATGGAGATAATAGTCGCTGGCATGATAGTGTTGGTGTTGCCAGTGGTAATTTTCTATCAGCGAAG.........................................................................................................................................................................AAAAGAGGAGTTGTTGAAGGAATTGATTATGCTTCAACTGGTGAAGTAAAGAAGATAGATGTTTCTCGAATTCGCGAGAGGCTTGATCACGATTCCATAGTGCTATTGAGCAATCTTGGTTATTCCAGCTCTGGAGAAGTATTAAACTGCAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACATACGAAGTTGCAACAGCTTGTGCCTTAGCTCTAGGAGCAGAAAAACTAATTTGTATCATAGACGGCCCAATTCTTGATGAGTCGAGCCGTCTCATTCGTTTCTTAACTCTTCAAGATGCTGATATGCTGGTCCGCAGACGAGCTGAGCAAAGTGAGACTGCTGCTAATTATGTAAAAGCTGTTAGTCAGGAGGACTTCAATCGTTTAAGTTACCATGGTTCCAATGGATCGCTCCCTTCCCAAAATGGCGATGTTTATAGCCAAAGATATAATCCGACATTTCAGAATGGCATTGGTTTTGACAATGGAAATGGGCTTTGGTCTAGTGAACAAGGTTTTGCCATTGGAGGACAAGAGAAACTAAGCCGATCAAATGGTTATCTCTCAGAATTAGCTGCTGCTGCTTTTGTTTGCCGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGGTGTTCAAAGAGTGCACCTGCTGGATGGCACTATTGGTGGAGTTTTATTAAAGGAATTGTTCCAAAGAGATGGAGTTGGGACAATGGTTGCTAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGATCTTTATGAAGGAGCACGGATGGCCAGGGTGTCAGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0030E13-j0fao/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U586039" ref_strand="+" ref_description="SGN-U586039 Tomato 200607#2 [3 ESTs aligned] (*GB) gi|157353172|emb|CAO45095.1| (e_value=4e-86) unnamed; (*ATH) AT3G48270.1 (e_value=2e-56) | Symbol: None | cytochrome P450 71A26, putative (CYP71A26), identical to Cytochrome P450 71A26 (SP:Q9STK7) {Arabidopsis thaliana} | chr3:17887556-17889158 FORWARD | Aliases: None; (*SWP) sp|O81974|C71D8_SOYBN (e_value=2e-78) Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8; ">
      <seq>tggtggtaatggagattcaacactccaattttgctatgcttattgccttccttctctttgtagccatagctctgaagctatggaaaaaatccaaaattcagtataaactccctccaggtcctagaaaactaccatttattgggaatttgcatcaattatctagctcattgcctcaccatacttttaagaatttgtcaaacaaatatggtcccatgatgcacctacaacttggtgaagtttcagctgttatagtatcatcaccacaagtggcaaaagaggtactgaagactcatgacttaatctttgctaataggccacaacttctttctgtacagattctaagcaacaacagtcctaccctttcattctctccttatggggctaattggagacagcttagaaaagtatgtgtcttggagcttttaagtgcaaagcgggttcaatcatttgagtcaataagggaagaggaagttgataatcttattgaagcaatttcattgatacagccacaagttcctattgatattagtgaaatgatattctcgatgacgaataacataactgccagggcagcctttggtaagaaatgcaaacacaaagatgagtttattaaagctatgaaaacaattacagagctatcaggaggttttgatataccagatttatttccttccttgaaaattttccactcattaagtggagtgaagcctgcactcgagaaagtacatcaaaaggttgataaaatctttgaggatataatacaagagcataaggaaaacaagagagatatgagcagtaacatgctgtataaggaagatttggttgatgttctacttagggttcaagaaagtggtgatttagaaatccccatatcaagaaacactctcaaatctgtcattttggaaatgttcatagggggaacagacacatcatcgacagttttagagtgggctatttctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0030E13-j0fao/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0030E13.1" temp_strand="+" temp_description="C02HBa0030E13.1  AC226502.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0030E13 sequenced_by:kribb upload_account_name:korea">
        <position start="51192" stop="53087"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="51490" g_stop="52391" g_length="902"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="902" r_length="902" r_score="0.998"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="52392" i_stop="52729" i_length="338">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="52730" g_stop="52787" g_length="58"/>
          <reference_exon_boundary r_type="cDNA" r_start="903" r_stop="960" r_length="58" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0030E13.1" gen_strand="+" ref_id="SGN-U586039" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>960</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0030E13.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U586039" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="51490" e_stop="52391"/>
          <exon e_start="52730" e_stop="52787"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGTGGTAATGGAGATTCAACACTCCAATTTTGCTATGCTTATTGCCTTCCTTCTCTTTGTAGCCATAGCTCTGAAGCTATGGAAAAAATCCAAAATTCAGTATAAACTCCCTCCAGGTCCTAGAAAACTACCATTTATTGGGAATTTGCATCAATTATCTAGCTCATTGCCTCACCATACTTTTAAGAATTTGTCAAACAAATATGGTCCCATGATGCACCTACAACTTGGTGAAGTTTCAGCTGTTATAGTATCATCACCACAAGTGGCAAAAGAGGTACTGAAGACTCATGACTTAATCTTTGCTAATAGGCCACAACTTCTTTCTGTACAGATTCTAAGCAACAACAGTCCTACCCTTTCATTCTCTCCTTATGGGGCTAATTGGAGACAGCTTAGAAAAGTATGTGTCTTGGAGCTTTTAAGTGCAAAGCGGGTTCAATCATTTGAGTCAATAAGGGAAGAGGAAGTTGATAATCTTATTGAAGCAATTTCATTGATACAGCCACAAGTTCCTATTGATATTAGTGAAATGATATTCTCGATGACGAATAACATAACTGCCAGGGCAGCCTTTGGTAAGAAATGCAAACACAAAGATGAGTTTATTAAAGCTATGAAAACAATTACAGAGCTATCAGGAGGTTTTGATATACCAGATTTATTTCCTTCCTTGAAAATTTTCCACTCATTAAGTGGAGTGAAGCCTGCACTCGAGAAAGTACATCAAAAGGTTGATAAAATCTTTGAGGATATAATACAAGAGCATAAGGAAAACAAGAGAGATATGAGCAGTAACATGCTGTATAAGGAAGATTTGGTTGATGTTCTACTTAGGGTTCAAGAAAGTGGTGATTTAGAAATCCCCATATCAAGAAACACTCTCAAATCTGTCATTTTGGTATGTTCTTTCAACCTTATAAAATCCCCTTTTCTAAAACAAGCCGTGTTTTAGTTGTTTGCAAGTAACACTTTTTGGAACATCATATTATGTTTGTGTCAACTCAATCACACAGAAAAATATCTGCTAACTAGAAGGAAATTATACATGAGGACTTTACTATAAAATTGAATGCTTGATATGTCAAAATTATTATATTGATGTATCTATATGTTGCCTACTTATCATGGAGCATAGAGAAGATGTTTTTATCATATTGCCTAATACTACTGAGTGACTAACTTTATCAGCTCAATTCTTGTGAACTAAAAGTTTGTCATATGGCTGTACACATTCAGGAAATGTTCATAGGGGGAACAGACACATCATCGACAGTTTTAGAGTGGGCTATTTCTG</genome_strand>
        <mrna_strand>TGGTGGTAATGGAGATTCAACACTCCAATTTTGCTATGCTTATTGCCTTCCTTCTCTTTGTAGCCATAGCTCTGAAGCTATGGAAAAAATCCAAAATTCAGTATAAACTCCCTCCAGGTCCTAGAAAACTACCATTTATTGGGAATTTGCATCAATTATCTAGCTCATTGCCTCACCATACTTTTAAGAATTTGTCAAACAAATATGGTCCCATGATGCACCTACAACTTGGTGAAGTTTCAGCTGTTATAGTATCATCACCACAAGTGGCAAAAGAGGTACTGAAGACTCATGACTTAATCTTTGCTAATAGGCCACAACTTCTTTCTGTACAGATTCTAAGCAACAACAGTCCTACCCTTTCATTCTCTCCTTATGGGGCTAATTGGAGACAGCTTAGAAAAGTATGTGTCTTGGAGCTTTTAAGTGCAAAGCGGGTTCAATCATTTGAGTCAATAAGGGAAGAGGAAGTTGATAATCTTATTGAAGCAATTTCATTGATACAGCCACAAGTTCCTATTGATATTAGTGAAATGATATTCTCGATGACGAATAACATAACTGCCAGGGCAGCCTTTGGTAAGAAATGCAAACACAAAGATGAGTTTATTAAAGCTATGAAAACAATTACAGAGCTATCAGGAGGTTTTGATATACCAGATTTATTTCCTTCCTTGAAAATTTTCCACTCATTAAGTGGAGTGAAGCCTGCACTCGAGAAAGTACATCAAAAGGTTGATAAAATCTTTGAGGATATAATACAAGAGCATAAGGAAAACAAGAGAGATATGAGCAGTAACATGCTGTATAAGGAAGATTTGGTTGATGTTCTACTTAGGGTTCAAGAAAGTGGTGATTTAGAAATCCCCATATCAAGAAACACTCTCAAATCTGTCATTTTG..................................................................................................................................................................................................................................................................................................................................................GAAATGTTCATAGGGGGAACAGACACATCATCGACAGTTTTAGAGTGGGCTATTTCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0030E13-j0fao/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U587670" ref_strand="+" ref_description="SGN-U587670 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|85068670|gb|ABC69415.1| (e_value=4e-19) CYP71AH2; (*ATH) AT5G25180.1 (e_value=2e-16)  Symbol: None | cytochrome P450 71B14, putative (CYP71B14), Identical to cytochrome P450 71B14 (SP:P58051) (Arabidopsis thaliana); cytochrome P450 71B1, Thlaspi arvense, SWISSPROT:C7B1_THLAR; similar to cytochrome P450 CYP83D1p (GIi:2739002) (Glycine... ; (*SWP) sp|O81974|C71D8_SOYBN (e_value=2e-18) Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8; ">
      <seq>gtcattttggtatgttctttcaaccttataaaatccccttttctaaaacaagccgtgttttagttgtttgcaagtaacactttttggaacatcatattatgtttgtgtcaactcaatcacacagaaaaatatctgctaactagaaggaaattatacatgaggactttactataaaattgaatgcttgatatgtcaaaattattatattgatgtatctatatgttgcctacttatcatggagcatagagaagatgtttttatcatattgcctaatactactgagtgactaactttatcagctcaattcttgtgaactaaaagtttgtcatatggctgtacacattcaggaaatgttcatagggggaacagacacatcatcgacagttttagagtgggctatttctgaaatgatgaagaatccacaagtgatggaaaaagcacaagctgaggtgagagaggttttcaaagggaaaagtaaaattacagaatcggaaattcaaaagttagattatataaaaatggttatcaaagagacactacgaatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0030E13-j0fao/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0030E13.1" temp_strand="+" temp_description="C02HBa0030E13.1  AC226502.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0030E13 sequenced_by:kribb upload_account_name:korea">
        <position start="52083" stop="53227"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52383" g_stop="52927" g_length="545"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="545" r_length="545" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0030E13.1" gen_strand="+" ref_id="SGN-U587670" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>545</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0030E13.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U587670" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="52383" e_stop="52927"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCATTTTGGTATGTTCTTTCAACCTTATAAAATCCCCTTTTCTAAAACAAGCCGTGTTTTAGTTGTTTGCAAGTAACACTTTTTGGAACATCATATTATGTTTGTGTCAACTCAATCACACAGAAAAATATCTGCTAACTAGAAGGAAATTATACATGAGGACTTTACTATAAAATTGAATGCTTGATATGTCAAAATTATTATATTGATGTATCTATATGTTGCCTACTTATCATGGAGCATAGAGAAGATGTTTTTATCATATTGCCTAATACTACTGAGTGACTAACTTTATCAGCTCAATTCTTGTGAACTAAAAGTTTGTCATATGGCTGTACACATTCAGGAAATGTTCATAGGGGGAACAGACACATCATCGACAGTTTTAGAGTGGGCTATTTCTGAAATGATGAAGAATCCACAAGTGATGGAAAAAGCACAAGCTGAGGTGAGAGAGGTTTTCAAAGGGAAAAGTAAAATTACAGAATCGGAAATTCAAAAGTTAGATTATATAAAAATGGTTATCAAAGAGACACTACGAATG</genome_strand>
        <mrna_strand>GTCATTTTGGTATGTTCTTTCAACCTTATAAAATCCCCTTTTCTAAAACAAGCCGTGTTTTAGTTGTTTGCAAGTAACACTTTTTGGAACATCATATTATGTTTGTGTCAACTCAATCACACAGAAAAATATCTGCTAACTAGAAGGAAATTATACATGAGGACTTTACTATAAAATTGAATGCTTGATATGTCAAAATTATTATATTGATGTATCTATATGTTGCCTACTTATCATGGAGCATAGAGAAGATGTTTTTATCATATTGCCTAATACTACTGAGTGACTAACTTTATCAGCTCAATTCTTGTGAACTAAAAGTTTGTCATATGGCTGTACACATTCAGGAAATGTTCATAGGGGGAACAGACACATCATCGACAGTTTTAGAGTGGGCTATTTCTGAAATGATGAAGAATCCACAAGTGATGGAAAAAGCACAAGCTGAGGTGAGAGAGGTTTTCAAAGGGAAAAGTAAAATTACAGAATCGGAAATTCAAAAGTTAGATTATATAAAAATGGTTATCAAAGAGACACTACGAATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0030E13-j0fao/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U600012" ref_strand="+" ref_description="SGN-U600012 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|5915836|sp|P93531|C71D7_SOLCH (e_value=3e-44) Cytochrome P450 71D7; (*ATH) AT3G26300.1 (e_value=3e-33) | Symbol: None | cytochrome P450 family protein, contains Pfam profile: PF00067 cytochrome P450 | chr3:9640436-9642103 REVERSE | Aliases: F20C19.2; (*SWP) sp|P93531|C71D7_SOLCH (e_value=3e-45) Cytochrome P450 71D7 OS=Solanum chacoense GN=CYP71D7; ">
      <seq>ggaaaaatgtgaaattggtggctatgacatacctgcaaaaaccaaagtcatcatcaatgcatgggcaataggtagacatccacaacactgggaaaatgctgaatgctttgaaccagaaagattccaagatttagacttggatttcgtagggactaatcttgagtacataccatttggaggtggcagaaggatgtgtccagggtcattatttggaattgcaaatgttgaacttccacttgccaaattactatttcatttcgactgggaactccctgatggaattgaagcaagtgaccttgacatgacagagacttttggtgcaaccgttggaaggaagaatgatttgtacttggttgcaaaacctcatatttccaaatcctaatgcacatgaaataagggttcttctattcttttttctctggtattcactttagcaaaatgaaagcagcccacccaagtgtccacatttcttaatatgcccaaacagaagaaaaatctcttgtctagtctctgcctactgtatgtgctaaatcaaactataataagttgtctacagg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0030E13-j0fao/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0030E13.1" temp_strand="+" temp_description="C02HBa0030E13.1  AC226502.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0030E13 sequenced_by:kribb upload_account_name:korea">
        <position start="52667" stop="53822"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52966" g_stop="53522" g_length="557"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="557" r_length="557" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0030E13.1" gen_strand="+" ref_id="SGN-U600012" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>557</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0030E13.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U600012" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="52966" e_stop="53522"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAAAATGTGAAATTGGTGGCTATGACATACCTGCAAAAACCAAAGTCATCATCAATGCATGGGCAATAGGTAGACATCCACAACACTGGGAAAATGCTGAATGCTTTGAACCAGAAAGATTCCAAGATTTAGACTTGGATTTCGTAGGGACTAATCTTGAGTACATACCATTTGGAGGTGGCAGAAGGATGTGTCCAGGGTCATTATTTGGAATTGCAAATGTTGAACTTCCACTTGCCAAATTACTATTTCATTTCGACTGGGAACTCCCTGATGGAATTGAAGCAAGTGACCTTGACATGACAGAGACTTTTGGTGCAACCGTTGGAAGGAAGAATGATTTGTACTTGGTTGCAAAACCTCATATTTCCAAATCCTAATGCACATGAAATAAGGTTTCTTCTATTCTTTTTTCTCTGTTATTCACTTTAGCAAAATGAAAGCAGCCCACCCAAGTGTCCACATTTCTTAATATGCCCAAACAGAAGAAAAATCTCTTGTCTAGTCTCTGCCTACTGTATGTGCTAAATCAAACTATAATAAGTTGTCTACAGG</genome_strand>
        <mrna_strand>GGAAAAATGTGAAATTGGTGGCTATGACATACCTGCAAAAACCAAAGTCATCATCAATGCATGGGCAATAGGTAGACATCCACAACACTGGGAAAATGCTGAATGCTTTGAACCAGAAAGATTCCAAGATTTAGACTTGGATTTCGTAGGGACTAATCTTGAGTACATACCATTTGGAGGTGGCAGAAGGATGTGTCCAGGGTCATTATTTGGAATTGCAAATGTTGAACTTCCACTTGCCAAATTACTATTTCATTTCGACTGGGAACTCCCTGATGGAATTGAAGCAAGTGACCTTGACATGACAGAGACTTTTGGTGCAACCGTTGGAAGGAAGAATGATTTGTACTTGGTTGCAAAACCTCATATTTCCAAATCCTAATGCACATGAAATAAGGGTTCTTCTATTCTTTTTTCTCTGGTATTCACTTTAGCAAAATGAAAGCAGCCCACCCAAGTGTCCACATTTCTTAATATGCCCAAACAGAAGAAAAATCTCTTGTCTAGTCTCTGCCTACTGTATGTGCTAAATCAAACTATAATAAGTTGTCTACAGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0030E13-j0fao/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U572746" ref_strand="+" ref_description="SGN-U572746 Tomato 200607#2 [5 ESTs aligned] (*GB) gi|157328205|emb|CAO17678.1| (e_value=1e-52) unnamed; (*ATH) AT5G67620.1 (e_value=2e-42) | Symbol: None | expressed protein | chr5:26981996-26983222 REVERSE | Aliases: K9I9.19, K9I9_19; ">
      <seq>acacgctccctttagtttcatttaccaccaaatttacttcattttctgccacgcttccttacatcattattttccccctgttactacttcttcttcttccttctctttagctcatataaactccaaaaaatttacacaactgaaaaccgtgcgtagtttttcttcctttattggtgattgaattttttgtgtggattcttctgcatcgtttgcgctctgcattattaatcgatcgaccggccggtgtttgagtttaagatggggaattgccaagcggcagaggcagcaactgtagtgattcaacatccaggcaataaaattgagaggatttactggtctataagtgcacatgaagtcatgagttcgaatcctggccactacgtcgcccttgttatcacttctccaacggggagaacacacaacggttcgcccgtcaggcagcttaagcttctccgccccggagatactttgcttcttggacaagtttatcgactcatctgcttcgaagatgtactaaaagagtttgctgcaaagaagtgcgtgaaacttggcaagttgctcagggaaagtggaggccttgttctcgattcaaagaaaatctccgtcgattcttcagcagtgaaaaacaagcccaaaatggtgaatggaatcccagctaagatggaacatgaaacttatcaaaatggaagcagtagcagcagtgggcaaagaagtgtgggaaggcatcatggtggtgtggggcaatggaaaccagccttacagagtattgcagagattggaacttgaactatacccaccattaagcattacactttccctaccatggctaaaccttttccaaaataaaaaaggatagcaactcaattgcccctagctaatagtaattagtttagaaaagtaccacttaattactacaatgtttgacgaattccctctgaagaatgcctctacttagtagctgcttattttcaagttccacgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0030E13-j0fao/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0030E13.1" temp_strand="-" temp_description="C02HBa0030E13.1  AC226502.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0030E13 sequenced_by:kribb upload_account_name:korea">
        <position start="58336" stop="54630"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="58036" g_stop="57829" g_length="208"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="208" r_length="208" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="57828" i_stop="57681" i_length="148">
            <donor d_prob="0.590" d_score="1.00"/>
            <acceptor a_prob="0.731" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="57680" g_stop="57381" g_length="300"/>
          <reference_exon_boundary r_type="cDNA" r_start="209" r_stop="508" r_length="300" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="57380" i_stop="57306" i_length="75">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="57305" g_stop="57154" g_length="152"/>
          <reference_exon_boundary r_type="cDNA" r_start="509" r_stop="660" r_length="152" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="57153" i_stop="55251" i_length="1903">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="55250" g_stop="54932" g_length="319"/>
          <reference_exon_boundary r_type="cDNA" r_start="661" r_stop="979" r_length="319" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0030E13.1" gen_strand="-" ref_id="SGN-U572746" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>979</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0030E13.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U572746" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="58036" e_stop="57829"/>
          <exon e_start="57680" e_stop="57381"/>
          <exon e_start="57305" e_stop="57154"/>
          <exon e_start="55250" e_stop="54932"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACACGCTCCCTTTAGTTTCATTTACCACCAAATTTACTTCATTTTCTGCCACGCTTCCTTACATCATTATTTTCCCCCTGTTACTACTTCTTCTTCTTCCTTCTCTTTAGCTCATATAAACTCCAAAAAATTTACACAACTGAAAACCGTGCGTAGTTTTTCTTCCTTTATTGGTGATTGAATTTTTTGTGTGGATTCTTCTGCATCGGTGAGTGTGTAGACTGTCAGAGTTCTCTCTGTTTTCATTCCTTTATTATTACTTGACAAGTCAGTTTTGGAGTAATCAATCATCTTCTTCTATTCATCTTTAACTTAACGCAGAAAATTAAAATTAAAATTTGTGCATTTTGATATAGTTTGCGCTCTGCATTATTAATCGATCGACCGGCCGGTGTTTGAGTTTAAGATGGGGAATTGCCAAGCGGCAGAGGCAGCAACTGTAGTGATTCAACATCCAGGCAATAAAATTGAGAGGATTTACTGGTCTATAAGTGCACATGAAGTCATGAGTTCGAATCCTGGCCACTACGTCGCCCTTGTTATCACTTCTCCAACGGGGAGAACACACAACGGTTCGCCCGTCAGGCAGCTTAAGCTTCTCCGCCCCGGAGATACTTTGCTTCTTGGACAAGTTTATCGACTCATCTGCTTCGAAGGTAAAAATAAAATATCTCAATTTGTTTTTTCTTCAATAATTTCTTATAATCTGATCGATCATTTTTTTTTTCCAGATGTACTAAAAGAGTTTGCTGCAAAGAAGTGCGTGAAACTTGGCAAGTTGCTCAGGGAAAGTGGAGGCCTTGTTCTCGATTCAAAGAAAATCTCCGTCGATTCTTCAGCAGTGAAAAACAAGCCCAAAATGGTGAATGGAATCCCAGCTAAGGTAATTAATTTTTACAAATTCCTTTTAGGACCATTTTTTATTTAGATGTCTTTTAAATTCTCGGGTCTAATTTAAGTCATTTTCACCCTTTTAAATATACCCAACGGCCAACTGAATACAAACTTAAATTACTGTTTGGATTTTCTTTTTCCTCTTCCTTTGCATTCATTTTAAATGGTACTACTACTATAATATTCTGTTTTTCAAATTTTTGGAGTAAAAAATTGGCTTGCAATTTAGGATTCTTTTGTATTTGATCTATTTAGACTTGATGATGCATTGTAATATTTCGATCACTTATAAAGCATCTTCCCCTTCCGTAAAGTTGAGGGCATAACAAAAAAAAGCTTATAACTTAGATAACTTCCTCCGTCTCATATTATTGTTCACTTTATTATAAATAGTTTTTTTAAATTACTTAGATAAATTACTTTAAACTTTCCAATTTCACCCGTGTAATTAATATTTCTTTCGAAGCCTAAACACAAGCTTATACGTTGTAAAATATCATTTTTTTTTCAAGACTAGATAAGATATATCTATTTTATGATTTCTTAATGAACGTGAAACAAACAAGTTTACGGTGAAGGGAGTAATAAATAAACAGAGGCGTCTTTTATACCTCGGATAGTGATATTGGGCCTGCTATTAAGTGTGTCTATTTTACATATGATGGCAAGTGAGATTATAATTGCACCTATGAGGCCATGATTATCTGAAGATTTGATAGGAATATATGACATATTTGGTTGTTAGTATTATTTGTCTAATTACATTATTTTACATATCTTTATATATAAACAGGGGAATAATTTGTTAGGTAACCATCCTATAAATGGTTCCTTACTTTATTTCCCGCTAGTCAATTATTTATACTATCACATTGAGGTTGTTATTGGTGCGCTTTTAAGAAATATGTATTGATCTATCAATTAGGGTGGATGAACCTAAGCCATTTCTTCTGTGCCATTATTAAGCTAGCTCGAAGTTTAGAAAATAAAAAGAGACTTTGAATCTTGTTATGTTAAATTTGTGACGTATATATTAGTGGGACAACATTAGGGTCGGCAAAGATCAAAAGGATACGGAGAAAGGCTGGCTAGAATTATGTTTCTTTTTTTTCATTTATTTACTTTGCTTGGTTTTGTAAAACGAATAATGGAAACCATGTGCTTTTCCTTGGTTAATTATGGAAAGGTATAGTGGAATCTCTATAAGAAGCCATTAAAATGTGTAATGAGACTCTCTCTCTTGATCATTATAGCATATGTTTTTAATTCCACTTCCCAATTATGCGGGCTTTATCTCTGTCGATCATAAAGGGAATCACATGGGTATTTCCTATTCATTTAGGGAGTTGAAACAGAAATTAAAGAATTAAACAAGAGTTTACCAGAATATATATCAAGTGGTTGTTAAAAGAGTATATAATAATTGTTAATGCTGATTCATTGTTAGTACAGTATAAGATTTTTTAAATTAGCGAAGAGACACTAAATCTGATTTTTCTCCATCTCCAAGCGTTTCAGTTCCAGAGTCTTAATCAGAAACTGTCGTTAGTGGCGTGACTTCTGGTTTAACGAAAGGATTAATTACTTAAACAGATAATGAATATTAATATTTTCAAATCGTTTGACTTTACAAGGTTACGGAATATTGTGATGAAATTTGTGTGATTAGATCATTTGTTTGATAAAGTAAAAGTAGTAATGGTAAATGGTGCGTCTGACAAAGTCGTGACGAGAGATATTCTGTTCAAAGCATAATGACTAATTGGTCATTGGTAAATAGCGGGTCTGAGAGAAAAAAAAAACACAGAGTCTCATCCAAATAGAAATGCTTTATTAGTATTGGTGTTTGTGCAGCTCAAAATTCATGCATCTTTTGTGCACTTTTTGTTCAGATGGAACATGAAACTTATCAAAATGGAAGCAGTAGCAGCAGTGGGCAAAGAAGTGTGGGAAGGCATCATGGTGGTGTGGGGCAATGGAAACCAGCCTTACAGAGTATTGCAGAGATTGGAACTTGAACTATACCCACCATTAAGCATTACACTTTCCCTACCATGGCTAAACCTTTTCCAAAATAAGAAAGGATAGCAACTCAATTGTCCCTAGCTAATAGTAATTAGTTTAGAAAAGTACCACTTAATTACTACAATGTTTGACGAATTCCCTCTGAAGAATGCATCTACTTAGTAGCTGCTTATTTTCAAGTTCCAC</genome_strand>
        <mrna_strand>ACACGCTCCCTTTAGTTTCATTTACCACCAAATTTACTTCATTTTCTGCCACGCTTCCTTACATCATTATTTTCCCCCTGTTACTACTTCTTCTTCTTCCTTCTCTTTAGCTCATATAAACTCCAAAAAATTTACACAACTGAAAACCGTGCGTAGTTTTTCTTCCTTTATTGGTGATTGAATTTTTTGTGTGGATTCTTCTGCATCG....................................................................................................................................................TTTGCGCTCTGCATTATTAATCGATCGACCGGCCGGTGTTTGAGTTTAAGATGGGGAATTGCCAAGCGGCAGAGGCAGCAACTGTAGTGATTCAACATCCAGGCAATAAAATTGAGAGGATTTACTGGTCTATAAGTGCACATGAAGTCATGAGTTCGAATCCTGGCCACTACGTCGCCCTTGTTATCACTTCTCCAACGGGGAGAACACACAACGGTTCGCCCGTCAGGCAGCTTAAGCTTCTCCGCCCCGGAGATACTTTGCTTCTTGGACAAGTTTATCGACTCATCTGCTTCGAAG...........................................................................ATGTACTAAAAGAGTTTGCTGCAAAGAAGTGCGTGAAACTTGGCAAGTTGCTCAGGGAAAGTGGAGGCCTTGTTCTCGATTCAAAGAAAATCTCCGTCGATTCTTCAGCAGTGAAAAACAAGCCCAAAATGGTGAATGGAATCCCAGCTAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGAACATGAAACTTATCAAAATGGAAGCAGTAGCAGCAGTGGGCAAAGAAGTGTGGGAAGGCATCATGGTGGTGTGGGGCAATGGAAACCAGCCTTACAGAGTATTGCAGAGATTGGAACTTGAACTATACCCACCATTAAGCATTACACTTTCCCTACCATGGCTAAACCTTTTCCAAAATAAAAAAGGATAGCAACTCAATTGCCCCTAGCTAATAGTAATTAGTTTAGAAAAGTACCACTTAATTACTACAATGTTTGACGAATTCCCTCTGAAGAATGCCTCTACTTAGTAGCTGCTTATTTTCAAGTTCCAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0030E13-j0fao/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U566217" ref_strand="+" ref_description="SGN-U566217 Tomato 200607#2 [6 ESTs aligned] (*GB) gi|157331164|emb|CAO63551.1| (e_value=3e-123) unnamed; (*ATH) AT4G37680.1 (e_value=2e-122) | Symbol: None | expressed protein, contains Pfam domain, PF03006: Uncharacterised protein family (Hly-III / UPF0073) | chr4:17700705-17702747 FORWARD | Aliases: F19F18.170, F19F18_170; (*SWP) sp|Q6TCH7|PAQR3_HUMAN (e_value=2e-14) Progestin and adipoQ receptor family member 3 OS=Homo sapiens GN=PAQR3; ">
      <seq>ataaatttggtttcacaagagctttttttttcctcttcttcttgttcatgccaagaatcgcatcccctaatttcgtccaaagattaagggttagggttctacgatcaagaaacacgttatcatctctgttgggttcttgaattgtatgttgtattagcaacttctctacgcaattctcattttgttattgttaggactcggatctgtttgtttgtttagcttaatcaggatttttgtattgacagataagaaattgaatgtgaagatgggtaagggcaaagagaaattgactggtaatgggtcaagggaggataatgaattattgtctccttccaaggaagggaaaggaaagagattatggaagaaagtgaagtaccagcttgtggagtatcattcattgcctgggtatttgaaagacaacgaatacattctgggtcattaccgggccgaatggccattgaagcaagcattgctcagcatcttcacaattcacaatgagaccctcaatgtttggacgcatttgatagggttcttcctcttccttgcgctcacaatttatactgcaaccaaagttcccaaggttgtagatctacattccttacagaatctgcctgatgtgctaaggaaggctgatttgcacaaattacaagcagaacttttaacttgtcttccttctttgccgtatatgcctgatttgcacaaacttcgagatggtttgctacgttcaccctctaattggcatattattgacctcctgcacaactgtctgcctgagcgattttcccacagcaaccatacagatgtttgtgtactgcggagtgtaaaagaagatgtggcaaatatattagcaccattgctggtgagaccaataactcgctggccattctatgccttccttggtggggcaatgttttgtttgttagcaagcagcacatgtcatttactttcttgccattcagagcgtttatcatacatcatgttgaggctcgactatgctggtatcgctgccctgatatcaacttcattttaccctccggtctatcattccttcatgtgttaccccttcttttgcaatctgtacctgggatttattacccctcctgggaattggcacaatcttgggttccctacttcctgtgttccagactcccgaatatcngagtattcgagcatctctattctttggaatgggcct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0030E13-j0fao/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0030E13.1" temp_strand="+" temp_description="C02HBa0030E13.1  AC226502.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0030E13 sequenced_by:kribb upload_account_name:korea">
        <position start="65029" stop="68353"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="65329" g_stop="65844" g_length="516"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="516" r_length="516" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="65845" i_stop="66553" i_length="709">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.774" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="66554" g_stop="66851" g_length="298"/>
          <reference_exon_boundary r_type="cDNA" r_start="517" r_stop="814" r_length="298" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="66852" i_stop="67673" i_length="822">
            <donor d_prob="0.981" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="67674" g_stop="68053" g_length="380"/>
          <reference_exon_boundary r_type="cDNA" r_start="815" r_stop="1195" r_length="381" r_score="0.982"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0030E13.1" gen_strand="+" ref_id="SGN-U566217" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>1194</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0030E13.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U566217" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="65329" e_stop="65844"/>
          <exon e_start="66554" e_stop="66851"/>
          <exon e_start="67674" e_stop="68053"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATAAATTTGGTTTCACAAGAGCTTTTTTTTTCCTCTTCTTCTTGTTCATGCCAAGAATCGCATCCCCTAATTTCGTCCAAAGATTAAGGGTTAGGGTTCTACGATCAAGAAACACGTTATCATCTCTGTTGGGTTCTTGAATTGTATGTTGTATTAGCAACTTCTCTACGCAATTCTCATTTTGTTATTGTTAGGACTCGGATCTGTTTGTTTGTTTAGCTTAATCAGGATTTTTGTATTGACAGATAAGAAATTGAATGTGAAGATGGGTAAGGGCAAAGAGAAATTGACTGGTAATGGGTCAAGGGAGGATAATGAATTATTGTCTCCTTCCAAGGAAGGGAAAGGAAAGAGATTATGGAAGAAAGTGAAGTACCAGCTTGTGGAGTATCATTCATTGCCTGGGTATTTGAAAGACAACGAATACATTCTGGGTCATTACCGGGCCGAATGGCCATTGAAGCAAGCATTGCTCAGCATCTTCACAATTCACAATGAGACCCTCAATGTTTGGACGTAAGAGTTACTTTTAACAATCCTCTTATTACTCCGCTTTCATTTTTTTTATAGGATACTTGTGCCTTTCTCTTCCTGTTTACATTCTTTTGTTTAATTGACTATTCCCCGATTAGAAAATGCGATAAGTTTTACGTATATATGTGTTGGATTAATTGAATTTTGGACTCAAAGTTCTTCATCTTTCATTGTTGTGGGAAGTATTAGCCCATTAGGTCCTTTAAGTTGTTGAAAAGGGGTCAATCAGTCATTTAGCTGCTGTTCTAAGATGAGGATCTGTACAGGCTGAAAATGTACCATTTATTATTCTTTGTTTGAAAGGGTTATTGGATCGATTGTTATGATTAATAGAAATTTGATGATAATTACATGAAGTGTTTTGCTACTTCAGTCATTTACATTCTGTCTTAGGAGAACTGATCTATACAGTTGCCACAAAAATTTAGAAAATGATGACAAATACTAGGTAAGTCATATTCAAAGAGTAAACTATGCATTCTATGATTGTGCTTTAGAAGGTGTTTAGGTACTAGGCTGACCATAGGCTCTACTCTTTGAATTTCCTTACTGAAGCGGCAACTGCTGGTTCCTTTGGTTCATTGCTTTGCCAAATGTTCTGTTTATGTTATCCTGATCCTGACCTACTGATTGAGAAAAAGAAGCTATAACAGATTGCTGAACAGGATCTTGATTTTCCTACTTGTTATAGGCATTTGATAGGGTTCTTCCTCTTCCTTGCGCTCACAATTTATACTGCAACCAAAGTTCCCAAGGTTGTAGATCTACATTCCTTACAGAATCTGCCTGATGTGCTAAGGAAGGCTGATTTGCACAAATTACAAGCAGAACTTTTAACTTGTCTTCCTTCTTTGCCGTATATGCCTGATTTGCACAAACTTCGAGATGGTTTGCTACGTTCACCCTCTAATTGGCATATTATTGACCTCCTGCACAACTGTCTGCCTGAGCGATTTTCCCACAGCAACCATACAGATGTTTGTGTACTGGTAAGAATGCCTTATTCAACTACTGGTTGCTGTATAATTATTCGGACACATTGTATTGCTTGTTTAGTTCGATTTCATCTTATTGATACCATTTCGATCTGTAATAAATGCTATCAAGACGAATTTGCTTGGCTAGGAATTCACAAGTCCATTGTGGAGTGTGCATCTCATGGACCTGTCATGCATCCTTTAATGAAAAAGAGGACATGGAACTGTTAGAAAGTTGGAGTTACTACTGATGCTTAAATATAAGAATTCTTCCAAATGATATTACTGCTTTTAATACTTCACCCCTGAAAAATGTAATCTAAAGTTTTCCTTGCTCTGATAATTATCGATAAGATTGTCTCTGGTCTGAAGTTTACTTTTACTCTTGTTAGGGTATGTTTGTGGTATTTAATTTATATAATTTATTGATTTTTTCTTATGGGGCTGGGCTGGTTGCAACCCCACTCATTTTTCATAACTGAAAACATAGTAATGTAGAATTCTTCTATTATTATAAATAATTGACACAGTTAATAGTAATACTGTTATGTCTAATGTGGATCACTCCACTAAGCCATAGCATATCAACTAGCTACTCTTAGGCTGCATGTTAAAGCAATAAAGTCCCACATTAATAGTTAATGAGATGGGTGGACTCCTTTTAAGGCTTAGCAATCCTCCTCCCTTTGAGCTAGCTTTTGGGGTGTGAATTAGGCCTAAATCCTAAGAGGTAAGTTAGGCCTAGCTTTTGAGGGAGGAGTAAGTTAGGCCTAAGACCTAATTTAAGACTGCCTCTTAGTAAACTGATATTTCACTATTGTACAATCTTTGCAGCGGAGTGTAAAAGAAGATGTGGCAAATATATTAGCACCATTGCTGGTGAGACCAATAACTCGCTGGCCATTCTATGCCTTCCTTGGTGGGGCAATGTTTTGTTTGTTAGCAAGCAGCACATGTCATTTACTTTCTTGCCATTCAGAGCGTTTATCATACATCATGTTGAGGCTCGACTATGCTGGTATCGCTGCCCTGATATCAACTTCATTTTACCCTCCGGTCTATTATTCCTTCATGTGTTACCCCTTCTTTTGCAATCTGTACCTGGGATTTATTA-CCCTCCTGGGAATTGGCACAATCTTGGGTTCCCTACTTCCTGTGTTCCAGACTCCCGAATATCGAGTTATTCGAGCATCTCTATTCTTTGGAATGGGCCT</genome_strand>
        <mrna_strand>ATAAATTTGGTTTCACAAGAGCTTTTTTTTTCCTCTTCTTCTTGTTCATGCCAAGAATCGCATCCCCTAATTTCGTCCAAAGATTAAGGGTTAGGGTTCTACGATCAAGAAACACGTTATCATCTCTGTTGGGTTCTTGAATTGTATGTTGTATTAGCAACTTCTCTACGCAATTCTCATTTTGTTATTGTTAGGACTCGGATCTGTTTGTTTGTTTAGCTTAATCAGGATTTTTGTATTGACAGATAAGAAATTGAATGTGAAGATGGGTAAGGGCAAAGAGAAATTGACTGGTAATGGGTCAAGGGAGGATAATGAATTATTGTCTCCTTCCAAGGAAGGGAAAGGAAAGAGATTATGGAAGAAAGTGAAGTACCAGCTTGTGGAGTATCATTCATTGCCTGGGTATTTGAAAGACAACGAATACATTCTGGGTCATTACCGGGCCGAATGGCCATTGAAGCAAGCATTGCTCAGCATCTTCACAATTCACAATGAGACCCTCAATGTTTGGAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATTTGATAGGGTTCTTCCTCTTCCTTGCGCTCACAATTTATACTGCAACCAAAGTTCCCAAGGTTGTAGATCTACATTCCTTACAGAATCTGCCTGATGTGCTAAGGAAGGCTGATTTGCACAAATTACAAGCAGAACTTTTAACTTGTCTTCCTTCTTTGCCGTATATGCCTGATTTGCACAAACTTCGAGATGGTTTGCTACGTTCACCCTCTAATTGGCATATTATTGACCTCCTGCACAACTGTCTGCCTGAGCGATTTTCCCACAGCAACCATACAGATGTTTGTGTACTG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGAGTGTAAAAGAAGATGTGGCAAATATATTAGCACCATTGCTGGTGAGACCAATAACTCGCTGGCCATTCTATGCCTTCCTTGGTGGGGCAATGTTTTGTTTGTTAGCAAGCAGCACATGTCATTTACTTTCTTGCCATTCAGAGCGTTTATCATACATCATGTTGAGGCTCGACTATGCTGGTATCGCTGCCCTGATATCAACTTCATTTTACCCTCCGGTCTATCATTCCTTCATGTGTTACCCCTTCTTTTGCAATCTGTACCTGGGATTTATTACCCCTCCTGGGAATTGGCACAATCTTGGGTTCCCTACTTCCTGTGTTCCAGACTCCCGAATATCNGAGTATTCGAGCATCTCTATTCTTTGGAATGGGCCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0030E13-j0fao/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U573877" ref_strand="+" ref_description="SGN-U573877 Tomato 200607#2 [25 ESTs aligned] (*GB) gi|189909333|gb|ACE60602.1| (e_value=2e-177) putative; (*ATH) AT2G22900.1 (e_value=4e-153) | Symbol: None | galactosyl transferase GMA12/MNN10 family protein, very low similarity to alpha-1,2-galactosyltransferase, Schizosaccharomyces pombe (SP:Q09174) | chr2:9751305-9753372 REVERSE | Aliases: T20K9.11; (*SWP) sp|O81007|GT7_ARATH (e_value=4e-152) Putative glycosyltransferase 7 OS=Arabidopsis thaliana GN=GT7; ">
      <seq>gagacaatggcagcaagtttagtgaggtgatgaacacttgtttctactcacttcacttcaccgacacccatctccttatctacttttctatcgtcacatactcgacggaatttgtatgctttcttagttactgccaaaattgctcttcgaactatcttcttaacacacagaaccaaagctggacacaatgtccagtagatggtgacaacttttttattgctactagacgtaaagccagcttgcctgggtaacgtatgcactccctcataaaatggtaacgcctcagttgccccaaactcatacatcttacacatccatggctaagcaaaactgtagaagtaaaatttcttctattttctctgatggatttctctttgctggtgcaagtattgtggctttgctagtaatatgggccttttggtccttcatgagcactagtccaaatgccgatcccagttttttaaccacttccgccgaccaaaactccgccttgaaaactcaggtagacccggtttcattaggcttcaatttacggtacgacccgcccgacccgactttctatgacgacccggatttgagttacactatggagaagccgattaagaagtgggacgagaaacgaaggcaatggctgaatttgcatccctctttcatccccggagcagaggaacggattctgatggtttccggttcacagtcgacgccgtgtaagaacccaataggcgaccatttgctgcttagattcttcaagaacaaagtagactactgccgaatccacgggtacgatattttttacaacaacgttttacttcagcctaagatgtggtcgttttgggcgaaaatgccggcgattaaagctgccatgatagctcatcctgaaactgagtggatctggtgggtcgattcagatgctgcgttcaccgacatggacttcaaacttcctttggatcgttacaaagaccataatttcgtacttcatggttgggaaaagttattatacgagcaacaaagctggacaagcatcaatgccggagttttcttgattcggaactgtcaatggtccatggacttaatggaagcttgggcgaaaatggggccacagtcaccggaatacgacaagtggggtgaaatcttacatacaactttcaaagacaagatattccaggaatcggatgaccaatccggtctagcatatctacttttgaaggaaaaggaaaaatggggtaacaaaatatacgtagaagggggatattacttcgaggggtattgggtggaaatcgtgggaacgtacgataacatcaccgacaggtatttagcaatagagaaaagtgaagggaggctaagaagaagacacgcagagagggtgagtgagagttatgctagtgtatgggaagaacaccttaaggaagctgggtatgggagatacagttggagaaggccattcatcacacatttcacagggtgtcagccatgtagtggagatcataatcagatgtattctggtgaaacttgttttgatgctatgcagaaagctttgaattttgctgataatcaggtgttgagaaagtatgggtatatgcataaggatctgcttgattcttcctctgtttttcctgttccttttaactttcctgcctaatacttccgttcttttaagttctatgtatacacatgtatgtacctattttgtagtagtttgctttcgttttacttcgtatttttatggtgcaatgttgtaagctagttgtaatatggagtttaacttatatatagtcaccacttgaagaaatttatactattcaaacagtgtttttttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0030E13-j0fao/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0030E13.1" temp_strand="+" temp_description="C02HBa0030E13.1  AC226502.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0030E13 sequenced_by:kribb upload_account_name:korea">
        <position start="74263" stop="76678"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="74562" g_stop="76378" g_length="1817"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="1817" r_length="1817" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0030E13.1" gen_strand="+" ref_id="SGN-U573877" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>1817</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0030E13.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U573877" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="74562" e_stop="76378"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGACAATGGCAGCAAGTTTAGTGAGGTGATGAACACTTGTTTCTACTCACTTCACTTCACCGACACCCATCTCCTTATCTACTTTTCTATCGTCACATACTCGACGGAATTTGTATGCTTTCTTAGTTACTGCCAAAATTGCTCTTCGAACTATCTTCTTAACACACAGAACCAAAGCTGGACACAATGTCCAGTAGATGGTGACAACTTTTTTATTGCTACTAGACGTAAAGCCAGCTTGCCTGGGTAACGTATGCACTCCCTCATAAAATGGTAACGCCTCAGTTGCCCCAAACTCATACATCTTACACATCCATGGCTAAGCAAAACTGTAGAAGTAAAATTTCTTCTATTTTCTCTGATGGATTTCTCTTTGCTGGTGCAAGTATTGTGGCTTTGCTAGTAATATGGGCCTTTTGGTCCTTCATGAGCACTAGTCCAAATGCCGATCCCAGTTTTTTAACCACTTCCGCCGACCAAAACTCCGCCTTGAAAACTCAGGTAGACCCGGTTTCATTAGGCTTCAATTTACGGTACGACCCGCCCGACCCGACTTTCTATGACGACCCGGATTTGAGTTACACTATGGAGAAGCCGATTAAGAAGTGGGACGAGAAACGAAGGCAATGGCTGAATTTGCATCCCTCTTTCATCCCCGGAGCAGAGGAACGGATTCTGATGGTTTCCGGTTCACAGTCGACGCCGTGTAAGAACCCAATAGGCGACCATTTGCTGCTTAGATTCTTCAAGAACAAAGTAGACTACTGCCGAATCCACGGGTACGATATTTTTTACAACAACGTTTTACTTCAGCCTAAGATGTGGTCGTTTTGGGCGAAAATGCCGGCGATTAAAGCTGCCATGATAGCTCATCCTGAAACTGAGTGGATCTGGTGGGTCGATTCAGATGCTGCGTTCACCGACATGGACTTCAAACTTCCTTTGGATCGTTACAAAGACCATAATTTCGTACTTCATGGTTGGGAAAAGTTATTATACGAGCAACAAAGCTGGACAAGCATCAATGCCGGAGTTTTCTTGATTCGGAACTGTCAATGGTCCATGGACTTAATGGAAACTTGGGCGAAAATGGGGCCACAGTCACCGGAATACGACAAGTGGGGTGAAATCTTACATACAACTTTCAAAGACAAGATATTCCAGGAATCGGATGACCAATCCGGTCTAGCATATCTACTTTTGAAGGAAAAGGAAAAATGGGGTAACAAAATATACGTAGAAGGGGGATATTACTTCGAGGGGTATTGGGTGGAAATCGTGGGAACGTACGATAACATCACCGACAGGTATTTAGCAATAGAGAAAAGTGAAGGGAGGCTAAGAAGAAGACACGCAGAGAGGGTGAGTGAGAGTTATGCTAGTGTATGGGAAGAACACCTTAAGGAAGCTGGGTATGGGAGATACAGTTGGAGAAGGCCATTCATCACACATTTCACAGGGTGTCAGCCATGTAGTGGAGATCATAATCAGATGTATTCTGGTGAAACTTGTTTTGATGCTATGCAGAAAGCTTTGAATTTTGCTGATAATCAGGTGTTGAGAAAGTATGGGTATATGCATAAGGATCTGCTTGATTCTTCCTCTGTTTTTCCTGTTCCTTTTAACTTTCCTGCCTAATACTTCCGTTCTTTTAAGTTCTATGTATACACATGTATGTACCTATTTTGTAGTAGTTTGCTTTCGTTTTACTTCGTATTTTTATGGTGCAATGTTGTAAGCTAGTTGTAATATGGAGTTTAACTTATATATAGTCACCACTTGAAGAAATTTATACTATTCAAACAGTGTTTTTTTT</genome_strand>
        <mrna_strand>GAGACAATGGCAGCAAGTTTAGTGAGGTGATGAACACTTGTTTCTACTCACTTCACTTCACCGACACCCATCTCCTTATCTACTTTTCTATCGTCACATACTCGACGGAATTTGTATGCTTTCTTAGTTACTGCCAAAATTGCTCTTCGAACTATCTTCTTAACACACAGAACCAAAGCTGGACACAATGTCCAGTAGATGGTGACAACTTTTTTATTGCTACTAGACGTAAAGCCAGCTTGCCTGGGTAACGTATGCACTCCCTCATAAAATGGTAACGCCTCAGTTGCCCCAAACTCATACATCTTACACATCCATGGCTAAGCAAAACTGTAGAAGTAAAATTTCTTCTATTTTCTCTGATGGATTTCTCTTTGCTGGTGCAAGTATTGTGGCTTTGCTAGTAATATGGGCCTTTTGGTCCTTCATGAGCACTAGTCCAAATGCCGATCCCAGTTTTTTAACCACTTCCGCCGACCAAAACTCCGCCTTGAAAACTCAGGTAGACCCGGTTTCATTAGGCTTCAATTTACGGTACGACCCGCCCGACCCGACTTTCTATGACGACCCGGATTTGAGTTACACTATGGAGAAGCCGATTAAGAAGTGGGACGAGAAACGAAGGCAATGGCTGAATTTGCATCCCTCTTTCATCCCCGGAGCAGAGGAACGGATTCTGATGGTTTCCGGTTCACAGTCGACGCCGTGTAAGAACCCAATAGGCGACCATTTGCTGCTTAGATTCTTCAAGAACAAAGTAGACTACTGCCGAATCCACGGGTACGATATTTTTTACAACAACGTTTTACTTCAGCCTAAGATGTGGTCGTTTTGGGCGAAAATGCCGGCGATTAAAGCTGCCATGATAGCTCATCCTGAAACTGAGTGGATCTGGTGGGTCGATTCAGATGCTGCGTTCACCGACATGGACTTCAAACTTCCTTTGGATCGTTACAAAGACCATAATTTCGTACTTCATGGTTGGGAAAAGTTATTATACGAGCAACAAAGCTGGACAAGCATCAATGCCGGAGTTTTCTTGATTCGGAACTGTCAATGGTCCATGGACTTAATGGAAGCTTGGGCGAAAATGGGGCCACAGTCACCGGAATACGACAAGTGGGGTGAAATCTTACATACAACTTTCAAAGACAAGATATTCCAGGAATCGGATGACCAATCCGGTCTAGCATATCTACTTTTGAAGGAAAAGGAAAAATGGGGTAACAAAATATACGTAGAAGGGGGATATTACTTCGAGGGGTATTGGGTGGAAATCGTGGGAACGTACGATAACATCACCGACAGGTATTTAGCAATAGAGAAAAGTGAAGGGAGGCTAAGAAGAAGACACGCAGAGAGGGTGAGTGAGAGTTATGCTAGTGTATGGGAAGAACACCTTAAGGAAGCTGGGTATGGGAGATACAGTTGGAGAAGGCCATTCATCACACATTTCACAGGGTGTCAGCCATGTAGTGGAGATCATAATCAGATGTATTCTGGTGAAACTTGTTTTGATGCTATGCAGAAAGCTTTGAATTTTGCTGATAATCAGGTGTTGAGAAAGTATGGGTATATGCATAAGGATCTGCTTGATTCTTCCTCTGTTTTTCCTGTTCCTTTTAACTTTCCTGCCTAATACTTCCGTTCTTTTAAGTTCTATGTATACACATGTATGTACCTATTTTGTAGTAGTTTGCTTTCGTTTTACTTCGTATTTTTATGGTGCAATGTTGTAAGCTAGTTGTAATATGGAGTTTAACTTATATATAGTCACCACTTGAAGAAATTTATACTATTCAAACAGTGTTTTTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0030E13-j0fao/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U599341" ref_strand="+" ref_description="SGN-U599341 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|55956976|emb|CAI11452.1| (e_value=5e-37) alpha-6-galactosyltransferase [Solanum tuberosum]; (*ATH) AT2G22900.1 (e_value=7e-23) | Symbol: None | galactosyl transferase GMA12/MNN10 family protein, very low similarity to alpha-1,2-galactosyltransferase, Schizosaccharomyces pombe (SP:Q09174) | chr2:9751305-9753372 REVERSE | Aliases: T20K9.11; (*SWP) sp|O81007|GT7_ARATH (e_value=7e-22) Putative glycosyltransferase 7 OS=Arabidopsis thaliana GN=GT7; ">
      <seq>gccgtttatcacgcacttcacggggtgtcagccatgtagtgggtaccacgcgacggagtatgtgggtgattcatgttgggtgggaatggaacgagcgttgaactttgcggataatcaggtgctacgtaactttgggttcatgcatgatgacatcaaaagtaattcccctgtctctcccttaaatttcgattttccggctgaagacagtgaagaattcgtgtgaaagaaaaaaaacatgacctcaggtttttactgtaggattaaaaagacacaagtcctgtgaattttggatgttcttttaattcagtatcaatgtatttgatagttattgtaatagtaaacaatgtttttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0030E13-j0fao/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0030E13.1" temp_strand="-" temp_description="C02HBa0030E13.1  AC226502.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0030E13 sequenced_by:kribb upload_account_name:korea">
        <position start="81051" stop="80100"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="80751" g_stop="80400" g_length="352"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="352" r_length="352" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0030E13.1" gen_strand="-" ref_id="SGN-U599341" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>352</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0030E13.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U599341" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="80751" e_stop="80400"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCCGTTTATCACGCACTTCACGGGGTGTCAGCCATGTAGTGGGGACCACGCGACGGAGTATGTGGGTGATTCATGTTGGGTGGGAATGGAACGAGCGTTGAACTTTGCGGATAATCAGGTGCTACGTAACTTTGGGTTCATGCATGATGACATCAAAAGTAATTCCCCTGTCTCTCCCTTAAATTTCGATTTTCCGGCTGAAGACAGTGAAGAATTCGTGTGAAAGAAAAAAAACATGACCTCAGGTTTTTACTGTAGGATTAAAAAGACACAAGTCCTGTGAATTTTGGATGTTCTTTTAATTCAGTATCAATGTATTTGATAGTTATTGTAATAGTAAACAATGTTTTTT</genome_strand>
        <mrna_strand>GCCGTTTATCACGCACTTCACGGGGTGTCAGCCATGTAGTGGGTACCACGCGACGGAGTATGTGGGTGATTCATGTTGGGTGGGAATGGAACGAGCGTTGAACTTTGCGGATAATCAGGTGCTACGTAACTTTGGGTTCATGCATGATGACATCAAAAGTAATTCCCCTGTCTCTCCCTTAAATTTCGATTTTCCGGCTGAAGACAGTGAAGAATTCGTGTGAAAGAAAAAAAACATGACCTCAGGTTTTTACTGTAGGATTAAAAAGACACAAGTCCTGTGAATTTTGGATGTTCTTTTAATTCAGTATCAATGTATTTGATAGTTATTGTAATAGTAAACAATGTTTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0030E13-j0fao/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U597718" ref_strand="+" ref_description="SGN-U597718 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>tttcacattgcattccttgtgactttgagaccttctcactcacataccatagtttcagtatctttcctttttcattcacaacgggccatggcccataacgtgtttcgggccaaacagcaatcgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0030E13-j0fao/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0030E13.1" temp_strand="-" temp_description="C02HBa0030E13.1  AC226502.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0030E13 sequenced_by:kribb upload_account_name:korea">
        <position start="82246" stop="81524"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81946" g_stop="81824" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="124" r_length="124" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0030E13.1" gen_strand="-" ref_id="SGN-U597718" ref_strand="+">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>123</cumulative_length_of_scored_exons>
        <coverage percentage="0.992" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0030E13.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U597718" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81946" e_stop="81824"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCACATTGCATTCCTTGTGACTTTGAGACCTTCTCACTCACATACCATAGTTTCAGTATCTTTCCTTTT-CATTCACAACGGGCCATGGCCCATAACGTGTTTCGGGCCAAACAGCAATCGT</genome_strand>
        <mrna_strand>TTTCACATTGCATTCCTTGTGACTTTGAGACCTTCTCACTCACATACCATAGTTTCAGTATCTTTCCTTTTTCATTCACAACGGGCCATGGCCCATAACGTGTTTCGGGCCAAACAGCAATCGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0030E13-j0fao/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U599647" ref_strand="+" ref_description="SGN-U599647 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|15240789|ref|NP_201565.1| (e_value=3e-11) unknown; (*ATH) AT5G67640.1 (e_value=3e-13) |; ">
      <seq>aggaagagaaaacgtggtaaaaataaatttagcttcggcatgaagagagaagagaaacggcaaaagctccatgaaaggctccttaggatgctctatcctcccccaccatcacctccttcccaagaagaaaacgatgacgacgaaccatttgacattctccaacaaggcgatcaaattccagatgaactggaagaggataggggttcttcctcctctggcgaccaagagactaatcatggtcctgacaagctaacaagggcacagaggaagaggattcgacggaagaagcttaaggaagcttcctcacgccgccagaatataatagggccgttgttgcctactgaagagagtgatctagagggtgtaaatgtgagtacaccagatgaggagccacaaggtgttcgacaaaatgccaacgagacagatgatgcagattcttgcctgaaacaaaacaaacaaaaacaaagaagaatggctaaacggttggttggtggtagctcaaagtcaactgggggtggcaacaagaattgaaagcttcatttctttggtcgagggataagaaaacttgactgactgcttaaaaaagggtcactgcaaagtgaaaatgttgaaatatacaactgctgacaaatttttaagaggttgtcttgttctttcacaactctgaggcatgtttttttatagtagcaaatgttcactaaatagtagttaatttagtgatttgtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0030E13-j0fao/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0030E13.1" temp_strand="-" temp_description="C02HBa0030E13.1  AC226502.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0030E13 sequenced_by:kribb upload_account_name:korea">
        <position start="85705" stop="83869"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="85405" g_stop="85282" g_length="124"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="123" r_length="123" r_score="0.992"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="85281" i_stop="85202" i_length="80">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="85201" g_stop="85144" g_length="58"/>
          <reference_exon_boundary r_type="cDNA" r_start="124" r_stop="181" r_length="58" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="85143" i_stop="85057" i_length="87">
            <donor d_prob="0.567" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="85056" g_stop="84814" g_length="243"/>
          <reference_exon_boundary r_type="cDNA" r_start="182" r_stop="424" r_length="243" r_score="0.996"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="84813" i_stop="84471" i_length="343">
            <donor d_prob="0.949" d_score="0.98"/>
            <acceptor a_prob="0.889" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="84470" g_stop="84169" g_length="302"/>
          <reference_exon_boundary r_type="cDNA" r_start="425" r_stop="726" r_length="302" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0030E13.1" gen_strand="-" ref_id="SGN-U599647" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>727</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0030E13.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U599647" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="85405" e_stop="85282"/>
          <exon e_start="85201" e_stop="85144"/>
          <exon e_start="85056" e_stop="84814"/>
          <exon e_start="84470" e_stop="84169"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTGAAGAGAAAACGTGGTAAAAATAAATTTAGCTTCGGCATGAAGAGAGAAGAGAAACGGCAAAAGCTCCATGAAAGGCTCCTTAGGATGCTCTATCCTCCCCCACCATCACCTCCTTCCCAAGTAATTAATTTTCTCCCTCGCTGTTTGTTTTTTCTTCTTTCATACTACTTGATTCTACCCCGAGTATATTATTATTGTAGGAAGAAAACGATGACGACGAACCATTTGACATTCTCCAACAAGGCGATCAAATTCCAGGTTTTCTTGCTAACATGGGTATAATTTTGATGTCTCTGCACTTCTTGATTGACAAATGTATTTGAAATAATTGAGTATTATGTGCAGATGAACTGGAAGAGGATAGGGGTTCTTCCTCCTCTGGCGACCAAGAGACTAATCATGGTCCTGACAAGCTAACAAGGGCACAGAGGAAGAGGATTCGACGGAAGAAGCTTAAGGAAGCTTCCTCACGCCGCCAGAATATAATAGGGCCGTTGTTGCCTACTGAAGAGAGTGATCTAGAGGGTGTAAATGTGAGTACGCCAGATGAGGAGCCACAAGGTGTTCGACAAAATGCCAACGAGACAGGTAGGCTTTGAGGAGTTAGAAAAAAAATAAAATCTCAATAGCTATAGTTTTCTTGTCTAGCTCCTTATATTTCACTTTGAATATCGTAACTTATATCTAGTGGAGGCAGGGGCGGAGCCAGAGGGGTGCAACCGTGCAAGGGGTCAATTGAACACCCCCTCACCTTGGTTGAAAAATTACACAATTTAGATAGGGGAAAAATGATTTTTTTGCATATATATGAAAGAAGTTGAGACAGGAGAACATTTTTTTTGAATTCCTGGCTTTGGAAATAAAATTTTACACCTGTTAGTGTACTTAAACCGTCTATGTATAGAACTTTTAGCTAGTGTCCATTGTTCAGATGATGCAGATTCTTGCCTGAAACAAAACAAACAAAAACAAAGAAGAATGGCTAAACGGTTGGTTGGTGGTAGCTCAAAGTCAACTGGGGGTGGCAACAAGAATTGAAAGCTTCATTTCTTTGGTCGAGGGATAAGAAAACTTGACTGACTGCTTAAAAAAGGGTCACTGCAAAGTGAAAATGTTGAAATATACAACTGCTGACAAATTTTTAAGAGGTTGTCTTGTTCTTTCACAACTCTGAGGCATGTTTTTTTATAGTAGCAAATGTTCACTAAATAGTAGTTAATTTAGTGATTTGTT</genome_strand>
        <mrna_strand>AG-GAAGAGAAAACGTGGTAAAAATAAATTTAGCTTCGGCATGAAGAGAGAAGAGAAACGGCAAAAGCTCCATGAAAGGCTCCTTAGGATGCTCTATCCTCCCCCACCATCACCTCCTTCCCAA................................................................................GAAGAAAACGATGACGACGAACCATTTGACATTCTCCAACAAGGCGATCAAATTCCAG.......................................................................................ATGAACTGGAAGAGGATAGGGGTTCTTCCTCCTCTGGCGACCAAGAGACTAATCATGGTCCTGACAAGCTAACAAGGGCACAGAGGAAGAGGATTCGACGGAAGAAGCTTAAGGAAGCTTCCTCACGCCGCCAGAATATAATAGGGCCGTTGTTGCCTACTGAAGAGAGTGATCTAGAGGGTGTAAATGTGAGTACACCAGATGAGGAGCCACAAGGTGTTCGACAAAATGCCAACGAGACAG.......................................................................................................................................................................................................................................................................................................................................................ATGATGCAGATTCTTGCCTGAAACAAAACAAACAAAAACAAAGAAGAATGGCTAAACGGTTGGTTGGTGGTAGCTCAAAGTCAACTGGGGGTGGCAACAAGAATTGAAAGCTTCATTTCTTTGGTCGAGGGATAAGAAAACTTGACTGACTGCTTAAAAAAGGGTCACTGCAAAGTGAAAATGTTGAAATATACAACTGCTGACAAATTTTTAAGAGGTTGTCTTGTTCTTTCACAACTCTGAGGCATGTTTTTTTATAGTAGCAAATGTTCACTAAATAGTAGTTAATTTAGTGATTTGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0030E13-j0fao/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U571988" ref_strand="+" ref_description="SGN-U571988 Tomato 200607#2 [27 ESTs aligned] (*GB) gi|18425006|ref|NP_569021.1| (e_value=7e-75) expressed protein [Arabidopsis thaliana]; (*ATH) AT5G65910.1 (e_value=5e-77) | Symbol: None | BSD domain-containing protein, contains Pfam profile PF03909: BSD domain | chr5:26378666-26380686 REVERSE | Aliases: K14B20.8, K14B20_8; ">
      <seq>tttcgaagcaacaaacaccaattattaggcgaccccaaaacgtgacgtagctttgtcttgcttgtctgtccttgagctcatatttgcttgtcgattgcgaagttcccaactgtcttagccaaattagtcttcgccggtgaactgtgaaacctccatctaacaatgtcctggtttgctcgatctattgccagcactctcagacttgaagacgacgacgatgacagagacgacgccgtgtcaagcaatcacgatcactctactggcaaacctactacggagaagcaacagaaagatgaggatgattcattgccagtatcaccgtcacgcggcgttaaggatgacttctcagagctcactaaaaccctaacccgtcagttttggggagtggcctctttcctggccccaccgtcccaatccgagcccgacaaatctttactggatccgacttcagaaccagctcgagattcggatgacgaggagtccgattctgcggggatcgcgggtttgcggagtgatattgctgaaattggggggagattcaagagtgggatatctaagctttcgaagaatattcccgtgtcggaaatcaccaaaatggcgtccaacttactgcaactgggaccggaggaggaagaagataagaggtttgattcaggtagaggtgcagttggtgttactgaggaagtagtggcttttgtgagggacattgctatgcatcctgagacatggttggatttccctttgttcgaggatgaagatgacgaagtagattttgacttgtctgatgcacaacaagagcatgcattagctgttgagcgttttgctccaagactggctgctttgaggattgagctctgcccaggctacatgaatgaggctcgcttttgggagatttactttgttcttctgcaccctagactgaataaacaagatgctgaacttctatccacaccccaggtattcaatgccagggcctcattatcgcaagagttacaaaaacgaaccaagccaatagaaggagattggtcaaaggaggagacttttaaatcaactgacgggggtggttctcaacatgaggagatgcttactgtcccttctgctccgctctccgcggatgcggttcaagacatgtctagtgtggatgtttcctctttatctgtagtggtcggctctggtaccgatgtgcaccctgtcattagtgaaaatcaaacagttgatagacttgtggctgaagaaggacctattaccctaagcaaagatgaaaaattgcaatctgcatcagcgactaagttagaggagagtgacgaagaggatgctgatgattggttgaaggaagaaaacacggaaattacaggtaccagtaaaaccaccatgtcttttgaggatgatgaggatgtgtctttcagtgatcttgaagaggatgattcagatatgcctgcaaaatcaaaaaacgcagcttacagctctgataaggactcacaagattgggtccagttgaggaaaagctccaccgacttgtctagagattccagctccatcaatcagattagttctgttaaggaaaatcctgatagcaaagaatcaaatgattggctggatattgatgaccttgaggtggcgtgaacttatgtaagatttaaatatagttgttgttccgctcatttcttgtgaatagctattccccatcctccagtccgtactctccgctgagaactccttaactgtattgtttgtacatagaacgcctaatgaaagacaatcgggttgtaatatagtgttcatgatattaattgatggtagcttcctgcttgtgtcactacatgagcatatata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0030E13-j0fao/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0030E13.1" temp_strand="+" temp_description="C02HBa0030E13.1  AC226502.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0030E13 sequenced_by:kribb upload_account_name:korea">
        <position start="99078" stop="103864"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="99378" g_stop="100143" g_length="766"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="766" r_length="766" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="100144" i_stop="101123" i_length="980">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.963" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="101124" g_stop="101314" g_length="191"/>
          <reference_exon_boundary r_type="cDNA" r_start="767" r_stop="957" r_length="191" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="101315" i_stop="102688" i_length="1374">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="102689" g_stop="103564" g_length="876"/>
          <reference_exon_boundary r_type="cDNA" r_start="958" r_stop="1833" r_length="876" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0030E13.1" gen_strand="+" ref_id="SGN-U571988" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>1833</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0030E13.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U571988" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="99378" e_stop="100143"/>
          <exon e_start="101124" e_stop="101314"/>
          <exon e_start="102689" e_stop="103564"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCGAAGCAACAAACACCAATTATTAGGCGACCCCAAAACGTGACGTAGCTTTGTCTTGCTTGTCTGTCCTTGAGCTCATATTTGCTTGTCGATTGCGAAGTTCCCAACTGTCTTAGCCAAATTAGTCTTCGCCGGTGAACTGTGAAACCTCCATCTAACAATGTCCTGGTTTGCTCGATCTATTGCCAGCACTCTCAGACTTGAAGACGACGACGATGACAGAGACGACGCCGTGTCAAGCAATCACGATCACTCTACTGGCAAACCTACTACGGAGAAGCAACAGAAAGATGAGGATGATTCATTGCCAGTATCACCGTCACGCGGCGTTAAGGATGACTTCTCAGAGCTCACTAAAACCCTAACCCGTCAGTTTTGGGGAGTGGCCTCTTTCCTGGCCCCACCGTCCCAATCCGAGCCCGACAAATCTTTACTGGATCCGACTTCAGAACCAGCTCGAGATTCGGATGACGAGGAGTCCGATTCTGCGGGGATCGCGGGTTTGCGGAGTGATATTGCTGAAATTGGGGGGAGATTCAAGAGTGGGATATCTAAGCTTTCGAAGAATATTCCCGTGTCGGAAATCACCAAAATGGCGTCCAACTTACTGCAACTGGGACCGGAGGAGGAAGAAGATAAGAGGTTTGATTCAGGTAGAGGTGCAGTTGGTGTTACTGAGGAAGTAGTGGCTTTTGTGAGGGACATTGCTATGCATCCTGAGACATGGTTGGATTTCCCTTTGTTCGAGGATGAAGATGACGAAGGTGTCTTTTTATTGTTCCTTTTAGATGTTCACCTAATTTTAAGCCTGTACTTTGTGCTTTCATTGCAATTTTTCTTACTCATATCAATACTCACTACTTGTGCAAAACTGATTTTGGTTATTAGAATGCTCTATAATGAATCTTTGACATCGATATAATAGTTTGGACTGCTCAATGCGTAGGTGCCACACAACCTGACTTGAACATGGAAGATTTTCCTCTCTTAGGCGAAGATGATATGAAACTAACTGTTTGATAACAAGCAGATTTCAAAGGTTAAATATACTCTTGGAGATTTGTAGCTTGGAAATAGATCACTCATCAATCCACACTGGCCTTAAAACTGAAAACACTTTAATTACTAGGTAGCAGCTTCAAAGATAGAAAAAAATGGAAGCTTTATTTAGGTTTCAATTTGATTATTGCAGGATTCAAGGTAAAGAATGAAATGCTTGTTTGAATACTTGAAAGTAGAGTGGTAAAGTTTCTAACTTTGTGAATATATCTTTCGGATGTGCAGAGTCAAACAGATGCTTGTTTATGTGTATTTCATGGTGAAACATAAACCTCCGGGTGTTTCCGTGACTGCCCTTTCATATAACGATGACTTTCCTTATCAAAGAAATATATATATCACGATGACTTAGGTCATATATGTACTTGTTCACCCTGAAGTGGATGAGCAAGATGCTGAAATTCTATTAATATATATATATATATTTTATTGTTGTAAGTTTTATTAATACTCCCATTATGATGGTGACATGGAAATATGTCGACTCCCTTTCTCACTTTTATTTTCTTATCTGTGTCCTGTTTTTCTGGTTAATCTCAAAACCCTTACCTAAACTATTGGTTATCATACATGACTGTTACTCTTTCTCACTTATGTGACTGTCAGTACATTATTGTGTAATGTATGCTCTGCGAGACGTATATTTAAAGATGGAATATCTAACATTTCGCTCTATATATTACAGTAGATTTTGACTTGTCTGATGCACAACAAGAGCATGCATTAGCTGTTGAGCGTTTTGCTCCAAGACTGGCTGCTTTGAGGATTGAGCTCTGCCCAGGCTACATGAATGAGGCTCGCTTTTGGGAGATTTACTTTGTTCTTCTGCACCCTAGACTGAATAAACAAGATGCTGAACTTCTATCCACACCCCAGGTAAGGCAGTGCATGTAATGCTATAAATGGTTCCATTTCTCATTTACAATCTATTTAGCACTTTAAATGATGCTCTTTTTATCTCCTTTTATAAATGAAAAAAATGCTTTATCGACAAAAGTAGTAAAAGACAGTCCATGCACAACTTACTGTTTTTTGAATCATTGTCTCTGATAACGATTGGCACTACTTACTGGTTCCTAATGAGTAGAATGTAGTTTAATGGATACGTTGTTGGACCTGGAGAAAGGCTGATTAGGATTTAATGAATGGAAGGTCACTTGCTAAATCTTTCTTTGTTTCGAGTTAGTCAAATCTTCCACACCTTTTTTCTATTTGATATGGTTGGCCATTCACTCATGTAGTTCCCATCAAGGTCATTTTTGTCTGGGCTGGTTATGAAATAAGAATTGAAGTTTTTATAGTAGAAGTGGGACTAATATGTGTACAGCTCTTACTGTGAAGTAGCTCTTGTGTTGTTGTGTTACTATTTATAATGGATGATTAAGTATTAAAGAGCAGAAGGAGAAATATCCTTATGAAAAATGGATAGAGATGGGACTATTCTAAACAGAAAAGTTATTGTGGGTTTGGAAAAAACATTTTCAAATCATAGTTATTTATGGGGTTTAGAGAATTGGCCTGGTCTCATCTGATTCTAGGGTAACAACTCTTATACAGAAGTAATTATTTCTTTCTGGTAATATGTATGGGTCAGAATAGTTTTTTCTCTAGTGAGAAGATTTTATGAAACCAATGCCAGTATTGCTGTAGCTAGTATTTAAACAATCCATCAGAGCTTAGAGATTATTCATTTTCCCATTTCCGACTCATTGCTATTTTTGGGACTTTACTCCTGTACATGTTCAGCATATTGATGTCATATTGACACCTCGCTATTCAGGGGAGCTAGTCAAAACATCTTCCTACCTATCTTTTTGCATCAAATCCTTCTTTTATTGTTTTGCTGCTTATGTTGCTACTTGGAAATTCTTCTTCTCTTCTTTTTAGCAGTTGAAAGCTTCAAGGTTGTATTTTTTTATCATTACTATTGGTATTTTCTGGTGAGCGTCCTATTGACATTTTTGGGCTTCTTGTGAACCCCCTGGACCCCTAATGTGTACCGTAAACATGTATTTTTCAGTAGTTGTGCATTTGGATGAGTAGGGAGGGAAATTATACTCTATCCATCTATATATAATGAGTATGAAACCAATAGTAAAACAGAGTGATTGCGCATATGCTTGGTTAGTTAGCATATGAACAAAGCATGCCTTCTAAAAAGTAGTCTACAGTTCACTAATCCTTTATTTCTTGTACTAGAGAATAGTTATTGGTAACATTTGGTGCTGAAAATGCTAATCCTGTGTGCAGGTATTCAATGCCAGGGCCTCATTATCGCAAGAGTTACAAAAACGAACCAAGCCAATAGAAGGAGATTGGTCAAAGGAGGAGACTTTTAAATCAACTGACGGGGGTGGTTCTCAACATGAGGAGATGCTTACTGTCCCTTCTGCTCCGCTCTCCGCGGATGCGGTTCAAGACATGTCTAGTGTGGATGTTTCCTCTTTATCTGTAGTGGTCGGCTCTGGTACCGATGTGCACCCTGTCATTAGTGAAAATCAAACAGTTGATAGACTTGTGGCTGAAGAAGGACCTATTACCCTAAGCAAAGATGAAAAATTGCAATCTGCATCAGCGACTAAGTTAGAGGAGAGTGACGAAGAGGATGCTGATGATTGGTTGAAGGAAGAAAACACGGAAATTACAGGTACCAGTAAAACCACCATGTCTTTTGAGGATGATGAGGATGTGTCTTTCAGTGATCTTGAAGAGGATGATTCAGATATGCCTGCAAAATCAAAAAACGCAGCTTACAGCTCTGATAAGGACTCACAAGATTGGGTCCAGTTGAGGAAAAGCTCCACCGACTTGTCTAGAGATTCCAGCTCCATCAATCAGATTAGTTCTGTTAAGGAAAATCCTGATAGCAAAGAATCAAATGATTGGCTGGATATTGATGACCTTGAGGTGGCGTGAACTTATGTAAGATTTAAATATAGTTGTTGTTCCGCTCATTTCTTGTGAATAGCTATTCCCCATCCTCCAGTCCGTACTCTCCGCTGAGAACTCCTTAACTGTATTGTTTGTACATAGAACGCCTAATGAAAGACAATCGGGTTGTAATATAGTGTTCATGATATTAATTGATGGTAGCTTCCTGCTTGTGTCACTACATGAGCATATATA</genome_strand>
        <mrna_strand>TTTCGAAGCAACAAACACCAATTATTAGGCGACCCCAAAACGTGACGTAGCTTTGTCTTGCTTGTCTGTCCTTGAGCTCATATTTGCTTGTCGATTGCGAAGTTCCCAACTGTCTTAGCCAAATTAGTCTTCGCCGGTGAACTGTGAAACCTCCATCTAACAATGTCCTGGTTTGCTCGATCTATTGCCAGCACTCTCAGACTTGAAGACGACGACGATGACAGAGACGACGCCGTGTCAAGCAATCACGATCACTCTACTGGCAAACCTACTACGGAGAAGCAACAGAAAGATGAGGATGATTCATTGCCAGTATCACCGTCACGCGGCGTTAAGGATGACTTCTCAGAGCTCACTAAAACCCTAACCCGTCAGTTTTGGGGAGTGGCCTCTTTCCTGGCCCCACCGTCCCAATCCGAGCCCGACAAATCTTTACTGGATCCGACTTCAGAACCAGCTCGAGATTCGGATGACGAGGAGTCCGATTCTGCGGGGATCGCGGGTTTGCGGAGTGATATTGCTGAAATTGGGGGGAGATTCAAGAGTGGGATATCTAAGCTTTCGAAGAATATTCCCGTGTCGGAAATCACCAAAATGGCGTCCAACTTACTGCAACTGGGACCGGAGGAGGAAGAAGATAAGAGGTTTGATTCAGGTAGAGGTGCAGTTGGTGTTACTGAGGAAGTAGTGGCTTTTGTGAGGGACATTGCTATGCATCCTGAGACATGGTTGGATTTCCCTTTGTTCGAGGATGAAGATGACGAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGATTTTGACTTGTCTGATGCACAACAAGAGCATGCATTAGCTGTTGAGCGTTTTGCTCCAAGACTGGCTGCTTTGAGGATTGAGCTCTGCCCAGGCTACATGAATGAGGCTCGCTTTTGGGAGATTTACTTTGTTCTTCTGCACCCTAGACTGAATAAACAAGATGCTGAACTTCTATCCACACCCCAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTCAATGCCAGGGCCTCATTATCGCAAGAGTTACAAAAACGAACCAAGCCAATAGAAGGAGATTGGTCAAAGGAGGAGACTTTTAAATCAACTGACGGGGGTGGTTCTCAACATGAGGAGATGCTTACTGTCCCTTCTGCTCCGCTCTCCGCGGATGCGGTTCAAGACATGTCTAGTGTGGATGTTTCCTCTTTATCTGTAGTGGTCGGCTCTGGTACCGATGTGCACCCTGTCATTAGTGAAAATCAAACAGTTGATAGACTTGTGGCTGAAGAAGGACCTATTACCCTAAGCAAAGATGAAAAATTGCAATCTGCATCAGCGACTAAGTTAGAGGAGAGTGACGAAGAGGATGCTGATGATTGGTTGAAGGAAGAAAACACGGAAATTACAGGTACCAGTAAAACCACCATGTCTTTTGAGGATGATGAGGATGTGTCTTTCAGTGATCTTGAAGAGGATGATTCAGATATGCCTGCAAAATCAAAAAACGCAGCTTACAGCTCTGATAAGGACTCACAAGATTGGGTCCAGTTGAGGAAAAGCTCCACCGACTTGTCTAGAGATTCCAGCTCCATCAATCAGATTAGTTCTGTTAAGGAAAATCCTGATAGCAAAGAATCAAATGATTGGCTGGATATTGATGACCTTGAGGTGGCGTGAACTTATGTAAGATTTAAATATAGTTGTTGTTCCGCTCATTTCTTGTGAATAGCTATTCCCCATCCTCCAGTCCGTACTCTCCGCTGAGAACTCCTTAACTGTATTGTTTGTACATAGAACGCCTAATGAAAGACAATCGGGTTGTAATATAGTGTTCATGATATTAATTGATGGTAGCTTCCTGCTTGTGTCACTACATGAGCATATATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0030E13-j0fao/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U569674" ref_strand="+" ref_description="SGN-U569674 Tomato 200607#2 [6 ESTs aligned] (*GB) gi|157329054|emb|CAO23919.1| (e_value=9e-147) unnamed; (*ATH) AT5G65890.1 (e_value=2e-133) | Symbol: None | ACT domain-containing protein (ACR1), contains Pfam profile ACT domain PF01842 | chr5:26372135-26375092 FORWARD | Aliases: K14B20.6, K14B20_6; ">
      <seq>gttttgactctgtctcctaatctccctttatatatatatctctgttttctttcatcaaaatctgaattttacattcaaatttcaagattccacctttctcagaaagcaaaagcaaatggagatttctgtttacaaaccctatggtgatcatgaatttcaatcactaattgaaagaattcaccctcccagggtgtgcattgataatgatacttgccgaaactgtactattgtgaaggttgatagtgcgaacaaacatggtatattgctggagatggtccaagttctgacggatctggacctactgattctaagatcatacatatcctctgatggtggctggttaatggatgttttccacgtaactgaccaacttgggaacaaaatcactgacgaaagcctcatccactacatcgaacaggctatttgtgcaagtagaagagggtccagggaagtccaaacatgtgttggtagaaatgtaaggcccaggcatgtctcaatggagcacacagctatggagatgacagcaatagatagaccagggttaatgtccgagatatctgctgtgctggctgagttaggatgccatgtctctggtgccgtggcatggacacataacaagcgagcagcctgcattgtttacatggaagatgatctgaagcatgggccaatcatggacccctatagagtggcacaaatacaggcccagctggagaatgttgttgaggcccaccattatgaaggggagcgacggagtgtgaggttggcagcccctgcagctagccagacccataccgaaagacggcttcatcagttgatggctgctgacagggactacgaacaatgttgttcctgtggttatgactcaagtggagatgatgtagctcacaggcagaagaagggatctaatagcacagaagtgaagatagaaaattgcaaggagaggggctactccattgttactgtgaggagtatggacagacccaaattgctatttgacactatctgcaccttgacagacttgcaatatgtcgtgttccatgcatccatcaattcttttgaatccattgccattcaggaatactatgtgagacacaagaatggatggactttagattcagaaagtgaaagacggaaaatgatccaaaatctgatggctgctactgagaggagagtatctcatgaattgagactggatgttactactcaaaacagggtaggactgttagcagatgtcacaagagtgtttcgggagaacggattatccataagcaggactgaggttggggtacagggagagcaagcagttggcacattctatgtaaaagatacttcagggcaagatgtgacttcagaaaccttggaggtagtaagacgagaaattggaggtaccgtcctggtggcaaataaatcctcagagaggccatcttcacaaccaacagatttgtcaaatacaagccctagcagtagcagtggcaagcaagacaacaagcctggtttctcattaggaaacatgttctggtctcagcttgagtggctttccagcaatttcagacctataaaatcctaagattccaagtgctgatcttgaagaccctactgtgtttaggccatgttgattgtaaatatttagcaacttccttctgtaaataattagcaacctccgtctgtaaataattagcaacagtggtaaataatgatagacgcatggtacaatgtacattatctttgcagagtaaacctatggaagttcaaaatttaagagtacctgcaggtactcgagtacctgcagttttttctgaggagtttaccattagtat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0030E13-j0fao/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0030E13.1" temp_strand="-" temp_description="C02HBa0030E13.1  AC226502.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0030E13 sequenced_by:kribb upload_account_name:korea">
        <position start="107521" stop="103383"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="107248" g_stop="107146" g_length="103"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="102" r_length="102" r_score="0.835"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="107145" i_stop="106799" i_length="347">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.908" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="106798" g_stop="106712" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="103" r_stop="189" r_length="87" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="106711" i_stop="106523" i_length="189">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.947" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="106522" g_stop="106477" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="190" r_stop="235" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="106476" i_stop="105793" i_length="684">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="105792" g_stop="105678" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="236" r_stop="350" r_length="115" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="105677" i_stop="105525" i_length="153">
            <donor d_prob="0.972" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="105524" g_stop="105457" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="351" r_stop="418" r_length="68" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="105456" i_stop="105288" i_length="169">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="105287" g_stop="104631" g_length="657"/>
          <reference_exon_boundary r_type="cDNA" r_start="419" r_stop="1075" r_length="657" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="104630" i_stop="104499" i_length="132">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.944" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="104498" g_stop="104394" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="1076" r_stop="1180" r_length="105" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="104393" i_stop="104273" i_length="121">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="104272" g_stop="103701" g_length="572"/>
          <reference_exon_boundary r_type="cDNA" r_start="1181" r_stop="1759" r_length="579" r_score="0.956"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0030E13.1" gen_strand="-" ref_id="SGN-U569674" ref_strand="+">
        <total_alignment_score>0.975</total_alignment_score>
        <cumulative_length_of_scored_exons>1753</cumulative_length_of_scored_exons>
        <coverage percentage="0.965" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0030E13.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U569674" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="107248" e_stop="107146"/>
          <exon e_start="106798" e_stop="106712"/>
          <exon e_start="106522" e_stop="106477"/>
          <exon e_start="105792" e_stop="105678"/>
          <exon e_start="105524" e_stop="105457"/>
          <exon e_start="105287" e_stop="104631"/>
          <exon e_start="104498" e_stop="104394"/>
          <exon e_start="104272" e_stop="103701"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCTCCTAATCTCCCTTTATATATATATATATATATATATATCTGTTTTCTTTCATCAAAATCTGAATTTTACATTCAAATTTCAAGATTCCACCTTTCTCAGGTAAATTTTTAGTATCAATTCTTGGTCAAAATCTTGATTTGCATTCAATCTAACTCGCCGTTTTGCTGCGTTTTTTTTTTTTTGCTTTTTCAAGAAAGTAATGGGTTTCTACTTTTAGTAATTTGATTACTACTTCTTTTGAACTACTTGTCGTGTGTTTCTTGAAAATACTGAAAACTTGTATCGATTGACAACCAAGAAATCAGATGATAGTAGTAAAGATTTGTTCTTTTTCAAACTTGTTGATTCAAAAACAGGACAAACAGCTGCTAGCTGTATTATATTTGTATATACTATAAATTAATGTGGATTTTTCTCACATGTTGTTGTACATTTATCAATCACAGAAAGCAAAAGCAAATGGAGATTTCTGTTTACAAACCCTATGGTGATCATGAATTTCAATCACTAATTGAAAGAATTCACCCTCCCAGGTTTAGTTTTAACTTCAATCTTACTGTCTAATTTTTTTTTTATTTATAATTTTGATTGATACACCCACCTTGTTGGATTTCAGTATTGTGTAAGTAACTTTTATACTGCATAGAATTTGAGCCCTTGTTTATATTTTGGCTTCATTACTTAATTTGTTTCTTGTTGTGGCTTTGGCTTTGGCTGTTCAGGGTGTGCATTGATAATGATACTTGCCGAAACTGTACTATTGTGAAGGTAGGAAAAATCGTTATCATTTTCTCTTATTCTATATGTTGATTTCGATAATGACTTGATTTGATTTGTTTTGGTTTAAGTTTTGAGTACCTAACCAGCTAATGGATTCCCTCTTAGACCCCAAACAGTATATACTGGGGCCAACTTACAGAAGTATTAGCCTAAAAAGACCTGCATTACCATCATTTAGTTAGGCGGTAATCAATTTAGTTAGGCGATAATTTTATATATTTTTCTTGCTTTAAGATTAATCCATGTGCTGTTATAGTTGAACAATTTCTTAGAAGATAAATAATTATTCTAAATTCGCACAAGGAATTTCGGAGAAGCTTATGTTTGCCTACTTTCCACTTATAAAATTCAGATTGCAATACTGCAGCTGTTTATTGATTGTTAATTGAAATGCTATTTACACAAAAATACTTTCTTATAGGGTCCACTATCGTTAAGGGATTGGGAATATTCTTAACCAGTTCTGGTGTAACCAAAAAGCTAAACAGAAAATGATTGAGAAAACTGAAATTTAATTTCTGCTCAGTTTCAACTCCGCAAGCTGCAATTTCTTTTGTTGTGCAATATTGATCTGAGATGTTTAAATTGTGCAAACATGACGTGAGAATTCATATAGCTGAATCTTATTTGTCCGGGATTATGACGTAGTTATTGTTATTTTTTGGACCACAGGTTGATAGTGCGAACAAACATGGTATATTGCTGGAGATGGTCCAAGTTCTGACGGATCTGGACCTACTGATTCTAAGATCATACATATCCTCTGATGGTGGCTGGTTAATGGATGGTTAGTTCTCTTCTTTATATATGCCTTTTCTCCCTTACAGCTGGTTTGAATATTATAATCCAATTAAAAAAAAGATGCAAGTAACAACTTTCTGAGCCATAGCTGAGTCATTCACAACTATAGTATTTTGTTTTTTCTTGCATCTTTTTCCAGTTTTCCACGTAACTGACCAACTTGGGAACAAAATCACTGACGAAAGCCTCATCCACTACATCGAACAGGTTAGGGTATGCTTTATTCACTTGAATTATACTACTTCAAGAAACCCATATTGTGGGTTTTAGGATAAAGGGCCTATAAAGTGTGTTGGCAGCTGTTATCCAAAAATAGGTTTTTATTTTTCGTTTTACAAATTAAACATTAAACTAAAAACAACCTTAATGCTTACAGGCTATTTGTGCAAGTAGAAGAGGGTCCAGGGAAGTCCAAACATGTGTTGGTAGAAATGTAAGGCCCAGGCATGTCTCAATGGAGCACACAGCTATGGAGATGACAGCAATAGATAGACCAGGGTTAATGTCCGAGATATCTGCTGTGCTGGCTGAGTTAGGATGCCATGTCTCTGGTGCCGTGGCATGGACACATAACAAGCGAGCAGCCTGCATTGTTTACATGGAAGATGATCTGAAGCATGGGCCAATCATGGACCCCTATAGAGTGGCACAAATACAGGCCCAGCTGGAGAATGTTGTTGAGGCCCACCATTATGAAGGGGAGCGACGGAGTGTGAGGTTGGCAGCCCCTGCAGCTAGCCAGACCCATACCGAAAGACGGCTTCATCAGTTGATGGCTGCTGACAGGGACTACGAACAATGTTGTTCCTGTGGTTATGACTCAAGTGGAGATGATGTAGCTCACAGGCAGAAGAAGGGATCTAATAGCACAGAAGTGAAGATAGAAAATTGCAAGGAGAGGGGCTACTCCATTGTTACTGTGAGGAGTATGGACAGACCCAAATTGCTATTTGACACTATCTGCACCTTGACAGACTTGCAATATGTCGTGTTCCATGCATCCATCAATTCTTTTGAATCCATTGCCATTCAGGTAATCGTTTACTTTTGCCCTCTTTATCTAACTGCTCCTGCAAAGTCATGGTGGTACAGGTCCAGACAGTACAAAAAAACCCTAAATCTTTGTTTTTAACTATCTACGTGTGCATGGAAAAAAAAAACACAGGAATACTATGTGAGACACAAGAATGGATGGACTTTAGATTCAGAAAGTGAAAGACGGAAAATGATCCAAAATCTGATGGCTGCTACTGAGAGGAGAGTATCTCATGTACGTTTTCAAATGGATTAACTAGAACACCGTTTAGTGTATCTTTATAATCTACTTCCGCCCTCCCTATAACAAAGTGCTCTAATGAGATATATATTAAGTGACTATATGATTTATACAGGAATTGAGACTGGATGTTACTACTCAAAACAGGGTAGGACTGTTAGCAGATGTCACAAGAGTGTTTCGGGAGAACGGATTATCCATAAGCAGGACTGAGGTTGGGGTACAGGGAGAGCAAGCAGTTGGCACATTCTATGTAAAAGATACTTCAGGGCAAGATGTGACTTCAGAAACCTTGGAGGTAGTAAGACGAGAAATTGGAGGTACCGTCCTGGTGGCAAATAAATCCTCAGGGAGGCCATCTTCTCAACCAACAGATTTGTCAAATACAAGCCCTAGCAGTAGCAGTGGCAAGCAAGACAAGAAGCCTGGTTTCTCATTAGGAAGCATGTTCTGGTCTCAGCTTGAGTGGCTTTCCAGCAATTTCAGACCTATAAAATCC------T--AAGTGCTGATCTTGAAGACCCTACTGTGTTTAGGCCATGTTGATTGTAAATATTTAGCAACTTCCTTCTGTAAATAATTAGCAACCTCCGTCTGTAAATAATTAGCAACAGTGGTAAATAATGATAGACGCATGGTACAATGTACATTATCTTTGCAGAGTAAAACCATTGGAAGTTCCAAAATTAA</genome_strand>
        <mrna_strand>GT-TTTGACTCTGTCTCCTAATCTCCCTTTATATATATATCTCTGTTTTCTTTCATCAAAATCTGAATTTTACATTCAAATTTCAAGATTCCACCTTTCTCAG...........................................................................................................................................................................................................................................................................................................................................................AAAGCAAAAGCAAATGGAGATTTCTGTTTACAAACCCTATGGTGATCATGAATTTCAATCACTAATTGAAAGAATTCACCCTCCCAG.............................................................................................................................................................................................GGTGTGCATTGATAATGATACTTGCCGAAACTGTACTATTGTGAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGATAGTGCGAACAAACATGGTATATTGCTGGAGATGGTCCAAGTTCTGACGGATCTGGACCTACTGATTCTAAGATCATACATATCCTCTGATGGTGGCTGGTTAATGGATG.........................................................................................................................................................TTTTCCACGTAACTGACCAACTTGGGAACAAAATCACTGACGAAAGCCTCATCCACTACATCGAACAG.........................................................................................................................................................................GCTATTTGTGCAAGTAGAAGAGGGTCCAGGGAAGTCCAAACATGTGTTGGTAGAAATGTAAGGCCCAGGCATGTCTCAATGGAGCACACAGCTATGGAGATGACAGCAATAGATAGACCAGGGTTAATGTCCGAGATATCTGCTGTGCTGGCTGAGTTAGGATGCCATGTCTCTGGTGCCGTGGCATGGACACATAACAAGCGAGCAGCCTGCATTGTTTACATGGAAGATGATCTGAAGCATGGGCCAATCATGGACCCCTATAGAGTGGCACAAATACAGGCCCAGCTGGAGAATGTTGTTGAGGCCCACCATTATGAAGGGGAGCGACGGAGTGTGAGGTTGGCAGCCCCTGCAGCTAGCCAGACCCATACCGAAAGACGGCTTCATCAGTTGATGGCTGCTGACAGGGACTACGAACAATGTTGTTCCTGTGGTTATGACTCAAGTGGAGATGATGTAGCTCACAGGCAGAAGAAGGGATCTAATAGCACAGAAGTGAAGATAGAAAATTGCAAGGAGAGGGGCTACTCCATTGTTACTGTGAGGAGTATGGACAGACCCAAATTGCTATTTGACACTATCTGCACCTTGACAGACTTGCAATATGTCGTGTTCCATGCATCCATCAATTCTTTTGAATCCATTGCCATTCAG....................................................................................................................................GAATACTATGTGAGACACAAGAATGGATGGACTTTAGATTCAGAAAGTGAAAGACGGAAAATGATCCAAAATCTGATGGCTGCTACTGAGAGGAGAGTATCTCAT.........................................................................................................................GAATTGAGACTGGATGTTACTACTCAAAACAGGGTAGGACTGTTAGCAGATGTCACAAGAGTGTTTCGGGAGAACGGATTATCCATAAGCAGGACTGAGGTTGGGGTACAGGGAGAGCAAGCAGTTGGCACATTCTATGTAAAAGATACTTCAGGGCAAGATGTGACTTCAGAAACCTTGGAGGTAGTAAGACGAGAAATTGGAGGTACCGTCCTGGTGGCAAATAAATCCTCAGAGAGGCCATCTTCACAACCAACAGATTTGTCAAATACAAGCCCTAGCAGTAGCAGTGGCAAGCAAGACAACAAGCCTGGTTTCTCATTAGGAAACATGTTCTGGTCTCAGCTTGAGTGGCTTTCCAGCAATTTCAGACCTATAAAATCCTAAGATTCCAAGTGCTGATCTTGAAGACCCTACTGTGTTTAGGCCATGTTGATTGTAAATATTTAGCAACTTCCTTCTGTAAATAATTAGCAACCTCCGTCTGTAAATAATTAGCAACAGTGGTAAATAATGATAGACGCATGGTACAATGTACATTATCTTTGCAGAGT-AAACCTATGGAAGTTCAAAATTTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>25</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="-" PGL_start="2965" PGL_stop="1297"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="2965" e_stop="2698"/>
            <exon e_start="2611" e_stop="2540"/>
            <exon e_start="2454" e_stop="2036"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.934" acc_prob="0.140" e_score="0.989"/>
          <exon-intron don_prob="0.952" acc_prob="0.875" e_score="1.000"/>
          <exon-only e_score="0.993"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.989">
            <gDNA_exon_boundary e_start="2965" e_stop="2698" e_length="268"/>
          </exon>
          <intron i_serial="1" don_prob="0.934" acc_prob="0.140">
            <gDNA_intron_boundary i_start="2697" i_stop="2612" i_length="86"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="2611" e_stop="2540" e_length="72"/>
          </exon>
          <intron i_serial="2" don_prob="0.952" acc_prob="0.875">
            <gDNA_intron_boundary i_start="2539" i_stop="2455" i_length="85"/>
          </intron>
          <exon e_serial="3" e_score="0.993">
            <gDNA_exon_boundary e_start="2454" e_stop="2036" e_length="419"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2965" stop="2698"/>
              <exon start="2611" stop="2540"/>
              <exon start="2454" stop="2036"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U585393" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATTCTGTCACACAATGCATCATTATCTTTTAGAAAGTATTTTCATGTGTATAAAACTAGAGATTCTGTGAAATTTGATAATCTTATATGAGTTATAAGCTATTACACGATTTCTACTTTTTCTAGCTGTCTTCTTGCTTTTGATTTTCCTGTATAGTCAGTTCCTTCTAACGTATGTTTAAATCGATCATCAATGTCATGGTTAGACTAATGGAATGCTGCTTTGGCTCAGTTTTACTCATTTGGCACTGGCCTCTTGGATTTATAAT : AATAATCCTCTGCTGCTGGATTTTGACAACTCTGAGTTGGGTGCTGACTGGTTTTGATTTCTTTTTCCATAC : CTTTGCAGATGACACTTGCTCAGCTTTGAAGGACTTTCAACAGAATCCTCAGAACAATAGCTTGCAAATTATACTTCCCTGTGCAAATCCTGGAACTTCTGACAAAACGTTGGAGCAGATTGGCGCCACGGTTCATAATTTCATTACTCAGGTACTGTTATCTATAATATACAAGAAACAAGGATAGGAGCTTACATATATTCTTAGCATTATCTTTGTGTTTTCGATTTCCAGCTTAATTCTAAGCTGAGAGAGGTACAAGGATTAGGATTAAATGATATCGGGGAAAATAGCGTAGGAACAATTTGTGACCCCTTCTCTGGTGCACCTAATTACAGCTTCACACCTGATCTGTGCCCAAAGGATACTATCCCAATTGAAGATCTGAAATATGTAAGTTACAAGCTTTAACATACTGA</gDNA_template>
            <first_frame> I  L  S  H  N  A  S  L  S  F  R  K  Y  F  H  V  Y  K  T  R  D  S  V  K  F  D  N  L  I  *  V  I  S  Y  Y  T  I  S  T  F  S  S  C  L  L  A  F  D  F  P  V  *  S  V  P  S  N  V  C  L  N  R  S  S  M  S  W  L  D  *  W  N  A  A  L  A  Q  F  Y  S  F  G  T  G  L  L  D  L  *   : *  *  S  S  A  A  G  F  *  Q  L  *  V  G  C  *  L  V  L  I  S  F  S  I   : P  L  Q  M  T  L  A  Q  L  *  R  T  F  N  R  I  L  R  T  I  A  C  K  L  Y  F  P  V  Q  I  L  E  L  L  T  K  R  W  S  R  L  A  P  R  F  I  I  S  L  L  R  Y  C  Y  L  *  Y  T  R  N  K  D  R  S  L  H  I  F  L  A  L  S  L  C  F  R  F  P  A  *  F  *  A  E  R  G  T  R  I  R  I  K  *  Y  R  G  K  *  R  R  N  N  L  *  P  L  L  W  C  T  *  L  Q  L  H  T  *  S  V  P  K  G  Y  Y  P  N  *  R  S  E  I  C  K  L  Q  A  L  T  Y  * </first_frame>
            <second_frame>  F  C  H  T  M  H  H  Y  L  L  E  S  I  F  M  C  I  K  L  E  I  L  *  N  L  I  I  L  Y  E  L  *  A  I  T  R  F  L  L  F  L  A  V  F  L  L  L  I  F  L  Y  S  Q  F  L  L  T  Y  V  *  I  D  H  Q  C  H  G  *  T  N  G  M  L  L  W  L  S  F  T  H  L  A  L  A  S  W  I  Y  N  :  N  N  P  L  L  L  D  F  D  N  S  E  L  G  A  D  W  F  *  F  L  F  P  Y  :  L  C  R  *  H  L  L  S  F  E  G  L  S  T  E  S  S  E  Q  *  L  A  N  Y  T  S  L  C  K  S  W  N  F  *  Q  N  V  G  A  D  W  R  H  G  S  *  F  H  Y  S  G  T  V  I  Y  N  I  Q  E  T  R  I  G  A  Y  I  Y  S  *  H  Y  L  C  V  F  D  F  Q  L  N  S  K  L  R  E  V  Q  G  L  G  L  N  D  I  G  E  N  S  V  G  T  I  C  D  P  F  S  G  A  P  N  Y  S  F  T  P  D  L  C  P  K  D  T  I  P  I  E  D  L  K  Y  V  S  Y  K  L  *  H  T   </second_frame>
            <third_frame>   S  V  T  Q  C  I  I  I  F  *  K  V  F  S  C  V  *  N  *  R  F  C  E  I  *  *  S  Y  M  S  Y  K  L  L  H  D  F  Y  F  F  *  L  S  S  C  F  *  F  S  C  I  V  S  S  F  *  R  M  F  K  S  I  I  N  V  M  V  R  L  M  E  C  C  F  G  S  V  L  L  I  W  H  W  P  L  G  F  I  I :   I  I  L  C  C  W  I  L  T  T  L  S  W  V  L  T  G  F  D  F  F  F  H  T :   F  A  D  D  T  C  S  A  L  K  D  F  Q  Q  N  P  Q  N  N  S  L  Q  I  I  L  P  C  A  N  P  G  T  S  D  K  T  L  E  Q  I  G  A  T  V  H  N  F  I  T  Q  V  L  L  S  I  I  Y  K  K  Q  G  *  E  L  T  Y  I  L  S  I  I  F  V  F  S  I  S  S  L  I  L  S  *  E  R  Y  K  D  *  D  *  M  I  S  G  K  I  A  *  E  Q  F  V  T  P  S  L  V  H  L  I  T  A  S  H  L  I  C  A  Q  R  I  L  S  Q  L  K  I  *  N  M  *  V  T  S  F  N  I  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0030E13.1" strand="-"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="2795" stop="2698"/>
                    <exon start="2611" stop="2540"/>
                    <exon start="2454" stop="2268"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>354</number_coding_nucleotides>
                  <number_encoded_amino_acids>118</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RMFKSIINVMVRLMECCFGSVLLIWHWPLGFIIIILCCWILTTLSWVLTGFDFFFHTFADDTCSALKDFQQNPQNNSLQIILPCANPGTSDKTLEQIGATVHNFITQVLLSIIYKKQG*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0030E13.1" strand="-"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="2247" stop="2044"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>201</number_coding_nucleotides>
                  <number_encoded_amino_acids>67</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>HYLCVFDFQLNSKLREVQGLGLNDIGENSVGTICDPFSGAPNYSFTPDLCPKDTIPIEDLKYVSYKL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="2170" e_stop="2062"/>
            <exon e_start="1965" e_stop="1297"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.922" acc_prob="0.993" e_score="0.972"/>
          <exon-only e_score="0.985"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.972">
            <gDNA_exon_boundary e_start="2170" e_stop="2062" e_length="109"/>
          </exon>
          <intron i_serial="1" don_prob="0.922" acc_prob="0.993">
            <gDNA_intron_boundary i_start="2061" i_stop="1966" i_length="96"/>
          </intron>
          <exon e_serial="2" e_score="0.985">
            <gDNA_exon_boundary e_start="1965" e_stop="1297" e_length="669"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2170" stop="2062"/>
              <exon start="1965" stop="1297"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U594162" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GGAAAATAGCGTAGGAACAATTTGTGACCCCTTCTCTGGTGCACCTAATTACAGCTTCACACCTGATCTGTGCCCAAAGGATACTATCCCAATTGAAGATCTGAAATAT : GTTCTGTCAAAAGTCACATGTTATGAAGGAAATTCTTCAGGAAATTGCGCGGGTGAAGGAAGATTCATTCCACAGGCCTCATCTGTGATATTATTCGCTTATACTCAATCTATTCAAGACCTGATAGAAATATTCCCTGATTTGCTGAGCCTAAGTCAATGCTCCAAAGTAAAACAAGCATTCGCCAACATTTTACAGTACCAGTGCAGGCCATTTAGACGTTCAGCACGAGTACTATGGTCATCTATGTTGTCACTCTCCATTCTCATGATACTTTTAGTACTAACATTGATAGTAAAAGCTCACCAAGAAACTGGAAGAAGCTTTGATACATGCTCCATTACTCCTAAAAAAGTTGAAACAATACCAAAAACCTTGCCAGATTGCAGTAATTCTGCAGACAATGTACAGAAAATGTAGATGCTTTGCATTTTTTTTTCTTTTTTTGTAGTTATAGATGGAAGTATACAGTATACCCATTCCCCTGAAGTCGTAAGACGCCAAAAAAATGGGGGTTAAGTTATAGAAAATAGAAATAGAGAATTCTTACTAAACTTGTACTTGATATATTGTTCTTGTCATGTACACGACTTAATAACTGTGTACATATTTGACATGAACAGTGATTGATGGATACTAGAGGCTAACTTTGGCCTTGTAAATTTGCTC</gDNA_template>
            <first_frame> G  K  *  R  R  N  N  L  *  P  L  L  W  C  T  *  L  Q  L  H  T  *  S  V  P  K  G  Y  Y  P  N  *  R  S  E  I   : C  S  V  K  S  H  M  L  *  R  K  F  F  R  K  L  R  G  *  R  K  I  H  S  T  G  L  I  C  D  I  I  R  L  Y  S  I  Y  S  R  P  D  R  N  I  P  *  F  A  E  P  K  S  M  L  Q  S  K  T  S  I  R  Q  H  F  T  V  P  V  Q  A  I  *  T  F  S  T  S  T  M  V  I  Y  V  V  T  L  H  S  H  D  T  F  S  T  N  I  D  S  K  S  S  P  R  N  W  K  K  L  *  Y  M  L  H  Y  S  *  K  S  *  N  N  T  K  N  L  A  R  L  Q  *  F  C  R  Q  C  T  E  N  V  D  A  L  H  F  F  F  F  F  C  S  Y  R  W  K  Y  T  V  Y  P  F  P  *  S  R  K  T  P  K  K  W  G  L  S  Y  R  K  *  K  *  R  I  L  T  K  L  V  L  D  I  L  F  L  S  C  T  R  L  N  N  C  V  H  I  *  H  E  Q  *  L  M  D  T  R  G  *  L  W  P  C  K  F  A  </first_frame>
            <second_frame>  E  N  S  V  G  T  I  C  D  P  F  S  G  A  P  N  Y  S  F  T  P  D  L  C  P  K  D  T  I  P  I  E  D  L  K  Y  :  V  L  S  K  V  T  C  Y  E  G  N  S  S  G  N  C  A  G  E  G  R  F  I  P  Q  A  S  S  V  I  L  F  A  Y  T  Q  S  I  Q  D  L  I  E  I  F  P  D  L  L  S  L  S  Q  C  S  K  V  K  Q  A  F  A  N  I  L  Q  Y  Q  C  R  P  F  R  R  S  A  R  V  L  W  S  S  M  L  S  L  S  I  L  M  I  L  L  V  L  T  L  I  V  K  A  H  Q  E  T  G  R  S  F  D  T  C  S  I  T  P  K  K  V  E  T  I  P  K  T  L  P  D  C  S  N  S  A  D  N  V  Q  K  M  *  M  L  C  I  F  F  S  F  F  V  V  I  D  G  S  I  Q  Y  T  H  S  P  E  V  V  R  R  Q  K  N  G  G  *  V  I  E  N  R  N  R  E  F  L  L  N  L  Y  L  I  Y  C  S  C  H  V  H  D  L  I  T  V  Y  I  F  D  M  N  S  D  *  W  I  L  E  A  N  F  G  L  V  N  L  L </second_frame>
            <third_frame>   K  I  A  *  E  Q  F  V  T  P  S  L  V  H  L  I  T  A  S  H  L  I  C  A  Q  R  I  L  S  Q  L  K  I  *  N  M :   F  C  Q  K  S  H  V  M  K  E  I  L  Q  E  I  A  R  V  K  E  D  S  F  H  R  P  H  L  *  Y  Y  S  L  I  L  N  L  F  K  T  *  *  K  Y  S  L  I  C  *  A  *  V  N  A  P  K  *  N  K  H  S  P  T  F  Y  S  T  S  A  G  H  L  D  V  Q  H  E  Y  Y  G  H  L  C  C  H  S  P  F  S  *  Y  F  *  Y  *  H  *  *  *  K  L  T  K  K  L  E  E  A  L  I  H  A  P  L  L  L  K  K  L  K  Q  Y  Q  K  P  C  Q  I  A  V  I  L  Q  T  M  Y  R  K  C  R  C  F  A  F  F  F  L  F  L  *  L  *  M  E  V  Y  S  I  P  I  P  L  K  S  *  D  A  K  K  M  G  V  K  L  *  K  I  E  I  E  N  S  Y  *  T  C  T  *  Y  I  V  L  V  M  Y  T  T  *  *  L  C  T  Y  L  T  *  T  V  I  D  G  Y  *  R  L  T  L  A  L  *  I  C   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0030E13.1" strand="-"/>
                <serials PGL_serial="1" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="2169" stop="2062"/>
                    <exon start="1965" stop="1546"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>525</number_coding_nucleotides>
                  <number_encoded_amino_acids>175</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ENSVGTICDPFSGAPNYSFTPDLCPKDTIPIEDLKYVLSKVTCYEGNSSGNCAGEGRFIPQASSVILFAYTQSIQDLIEIFPDLLSLSQCSKVKQAFANILQYQCRPFRRSARVLWSSMLSLSILMILLVLTLIVKAHQETGRSFDTCSITPKKVETIPKTLPDCSNSADNVQKM*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="-" PGL_start="4677" PGL_stop="3202"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="4677" e_stop="4340"/>
            <exon e_start="4243" e_stop="4056"/>
            <exon e_start="3394" e_stop="3202"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.841" acc_prob="0.980" e_score="0.982"/>
          <exon-intron don_prob="0.758" acc_prob="0.963" e_score="0.973"/>
          <exon-only e_score="0.984"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.982">
            <gDNA_exon_boundary e_start="4677" e_stop="4340" e_length="338"/>
          </exon>
          <intron i_serial="1" don_prob="0.841" acc_prob="0.980">
            <gDNA_intron_boundary i_start="4339" i_stop="4244" i_length="96"/>
          </intron>
          <exon e_serial="2" e_score="0.973">
            <gDNA_exon_boundary e_start="4243" e_stop="4056" e_length="188"/>
          </exon>
          <intron i_serial="2" don_prob="0.758" acc_prob="0.963">
            <gDNA_intron_boundary i_start="4055" i_stop="3395" i_length="661"/>
          </intron>
          <exon e_serial="3" e_score="0.984">
            <gDNA_exon_boundary e_start="3394" e_stop="3202" e_length="193"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="4677" stop="4340"/>
              <exon start="4243" stop="4056"/>
              <exon start="3394" stop="3202"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U585396" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ACACAAGAATAACCAAAAGTTTCTTACTAGCCACAAGCTATCCTAACCTTAATGATCAAGTCAAGGAATGAATTTTTCTCTTCTTTTATACCACTTTTACTTTTTATGTTTTGCCTCAAAAATATTCAACATCATACTATATCATCATCATGCCAAAATTACATGGAAGGGTTCTTCTTCCTTTCATTCTTTTATTAATTTCCACTAATATAATTGCCCAGAAATCTCTTGTATTTGGCTTCATTGATCGCGATCAAATTTCAAAAAGACCTGATCCTCTCAGACATTTTAAGTCATATAATGGGAGTTATAATCTTGGTGACAAGCACTATTGGGCT : TCTGCGGGTTTCACAGGCATACATGGATATGCAATTGCTGGGATTTGGTTGTTAGTTGGTTTGGGTTTTGGAAGTTACATGATTTTTAAGTATTTTCATGCCAATTCAACTACTTCAATGATTGAACATTCGCCTTCGTATTATATTTTGATGTTCTCGCTGGTTGTTCTGTTTACAATTCTTGCCAT : AGTTGCAAGCTGCGTTGCTTTGGCTGCAAACAATGGTTTTGAACATAGAGTAGAAAGGCTTCGCCGAACAATTTTTGATGCTGGTGGTGATACATGTCAATCCATCAGAAGGGTAATAAAGGTTTTGCTAAGTATGCAAACTCTTTTAAGCCCTTATAATTTTCAGGCAGAGCAGACGTTGAACATGACAACC</gDNA_template>
            <first_frame> T  Q  E  *  P  K  V  S  Y  *  P  Q  A  I  L  T  L  M  I  K  S  R  N  E  F  F  S  S  F  I  P  L  L  L  F  M  F  C  L  K  N  I  Q  H  H  T  I  S  S  S  C  Q  N  Y  M  E  G  F  F  F  L  S  F  F  Y  *  F  P  L  I  *  L  P  R  N  L  L  Y  L  A  S  L  I  A  I  K  F  Q  K  D  L  I  L  S  D  I  L  S  H  I  M  G  V  I  I  L  V  T  S  T  I  G  L :   L  R  V  S  Q  A  Y  M  D  M  Q  L  L  G  F  G  C  *  L  V  W  V  L  E  V  T  *  F  L  S  I  F  M  P  I  Q  L  L  Q  *  L  N  I  R  L  R  I  I  F  *  C  S  R  W  L  F  C  L  Q  F  L  P   : *  L  Q  A  A  L  L  W  L  Q  T  M  V  L  N  I  E  *  K  G  F  A  E  Q  F  L  M  L  V  V  I  H  V  N  P  S  E  G  *  *  R  F  C  *  V  C  K  L  F  *  A  L  I  I  F  R  Q  S  R  R  *  T  *  Q   </first_frame>
            <second_frame>  H  K  N  N  Q  K  F  L  T  S  H  K  L  S  *  P  *  *  S  S  Q  G  M  N  F  S  L  L  L  Y  H  F  Y  F  L  C  F  A  S  K  I  F  N  I  I  L  Y  H  H  H  A  K  I  T  W  K  G  S  S  S  F  H  S  F  I  N  F  H  *  Y  N  C  P  E  I  S  C  I  W  L  H  *  S  R  S  N  F  K  K  T  *  S  S  Q  T  F  *  V  I  *  W  E  L  *  S  W  *  Q  A  L  L  G   : F  C  G  F  H  R  H  T  W  I  C  N  C  W  D  L  V  V  S  W  F  G  F  W  K  L  H  D  F  *  V  F  S  C  Q  F  N  Y  F  N  D  *  T  F  A  F  V  L  Y  F  D  V  L  A  G  C  S  V  Y  N  S  C  H  :  S  C  K  L  R  C  F  G  C  K  Q  W  F  *  T  *  S  R  K  A  S  P  N  N  F  *  C  W  W  *  Y  M  S  I  H  Q  K  G  N  K  G  F  A  K  Y  A  N  S  F  K  P  L  *  F  S  G  R  A  D  V  E  H  D  N  </second_frame>
            <third_frame>   T  R  I  T  K  S  F  L  L  A  T  S  Y  P  N  L  N  D  Q  V  K  E  *  I  F  L  F  F  Y  T  T  F  T  F  Y  V  L  P  Q  K  Y  S  T  S  Y  Y  I  I  I  M  P  K  L  H  G  R  V  L  L  P  F  I  L  L  L  I  S  T  N  I  I  A  Q  K  S  L  V  F  G  F  I  D  R  D  Q  I  S  K  R  P  D  P  L  R  H  F  K  S  Y  N  G  S  Y  N  L  G  D  K  H  Y  W  A  :  S  A  G  F  T  G  I  H  G  Y  A  I  A  G  I  W  L  L  V  G  L  G  F  G  S  Y  M  I  F  K  Y  F  H  A  N  S  T  T  S  M  I  E  H  S  P  S  Y  Y  I  L  M  F  S  L  V  V  L  F  T  I  L  A  I :   V  A  S  C  V  A  L  A  A  N  N  G  F  E  H  R  V  E  R  L  R  R  T  I  F  D  A  G  G  D  T  C  Q  S  I  R  R  V  I  K  V  L  L  S  M  Q  T  L  L  S  P  Y  N  F  Q  A  E  Q  T  L  N  M  T  T </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0030E13.1" strand="-"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="4606" stop="4340"/>
                    <exon start="4243" stop="4056"/>
                    <exon start="3394" stop="3202"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>648</number_coding_nucleotides>
                  <number_encoded_amino_acids>216</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IFLFFYTTFTFYVLPQKYSTSYYIIIMPKLHGRVLLPFILLLISTNIIAQKSLVFGFIDRDQISKRPDPLRHFKSYNGSYNLGDKHYWASAGFTGIHGYAIAGIWLLVGLGFGSYMIFKYFHANSTTSMIEHSPSYYILMFSLVVLFTILAIVASCVALAANNGFEHRVERLRRTIFDAGGDTCQSIRRVIKVLLSMQTLLSPYNFQAEQTLNMTT</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="+" PGL_start="16763" PGL_stop="20990"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="19048" e_stop="19340"/>
            <exon e_start="19464" e_stop="19496"/>
            <exon e_start="19605" e_stop="20098"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.949" acc_prob="0.974" e_score="1.000"/>
          <exon-intron don_prob="0.957" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="19048" e_stop="19340" e_length="293"/>
          </exon>
          <intron i_serial="1" don_prob="0.949" acc_prob="0.974">
            <gDNA_intron_boundary i_start="19341" i_stop="19463" i_length="123"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="19464" e_stop="19496" e_length="33"/>
          </exon>
          <intron i_serial="2" don_prob="0.957" acc_prob="1.000">
            <gDNA_intron_boundary i_start="19497" i_stop="19604" i_length="108"/>
          </intron>
          <exon e_serial="3" e_score="0.998">
            <gDNA_exon_boundary e_start="19605" e_stop="20098" e_length="494"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19048" stop="19340"/>
              <exon start="19464" stop="19496"/>
              <exon start="19605" stop="20057"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U571256" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19057" stop="19340"/>
              <exon start="19464" stop="19496"/>
              <exon start="19605" stop="20098"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U588595" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTAGTTACTTTTAGTGTAAGGTCTTTCAATTATGGTGTTGCGTCTCATTATTACTTCAGAGTTTGGAACTTGACAGTTGAAACTTATTGTCATCTTCTTTCTGAGGTAGACTTAAAAGTATAAAGCATGTCAGAATTCCAATATTTTAAATGCATATGTCTCCTTTGGCTCTTATTAAATGATTCCTCATGTCAAAACTTGCTTGTTCCAGCCTCTTCTTTAAGCAGGAAATGGAGCTTTCATTGATAGGATTGCAAAATGCAGGAAAAACATCTCTTGTAAATGTTATTGCA : ACTGGTGGATACAGTGAAGACATGATACCAACT : GTGGGATTTAACATGCGCAAAGTGACGAAAGGAAATGTCACTATAAAATTGTGGGACCTTGGAGGTCAACCCAGATTCCGCAGTATGTGGGAGCGTTACTGTCGTGCTGTTTCTGCTATAGTGTATGCATCTCCTCTCCAGCTTATATTACTGTATTTGCTTTTACAGATAGATGTGAGATGAATCCATTTATACACTCATTTAGAAGATAACACATGATACTCTTATTACGAATTGAGATGAATCTTCTCCATGGTTTATTAATGAACAGTTTTATTGAATCTCATGGTTTGCCTGTCCTATTTGGTGCTTGACAGATTTATATTTTTATGCCTTCGATAGGTGGAATTCTTGATCTTGATCATTTATGTGTATTTAAAGGAATGATGCTAAATATGTTGCTCCCTTAAGAGTTTTAACAAATTTTAAGGACCTCAACTGTAATTTGATATACATGAATTCTTATTTTATAGCCTCGAGCTAATTTGGTTTCT</gDNA_template>
            <first_frame> V  V  T  F  S  V  R  S  F  N  Y  G  V  A  S  H  Y  Y  F  R  V  W  N  L  T  V  E  T  Y  C  H  L  L  S  E  V  D  L  K  V  *  S  M  S  E  F  Q  Y  F  K  C  I  C  L  L  W  L  L  L  N  D  S  S  C  Q  N  L  L  V  P  A  S  S  L  S  R  K  W  S  F  H  *  *  D  C  K  M  Q  E  K  H  L  L  *  M  L  L  Q :   L  V  D  T  V  K  T  *  Y  Q  L :   W  D  L  T  C  A  K  *  R  K  E  M  S  L  *  N  C  G  T  L  E  V  N  P  D  S  A  V  C  G  S  V  T  V  V  L  F  L  L  *  C  M  H  L  L  S  S  L  Y  Y  C  I  C  F  Y  R  *  M  *  D  E  S  I  Y  T  L  I  *  K  I  T  H  D  T  L  I  T  N  *  D  E  S  S  P  W  F  I  N  E  Q  F  Y  *  I  S  W  F  A  C  P  I  W  C  L  T  D  L  Y  F  Y  A  F  D  R  W  N  S  *  S  *  S  F  M  C  I  *  R  N  D  A  K  Y  V  A  P  L  R  V  L  T  N  F  K  D  L  N  C  N  L  I  Y  M  N  S  Y  F  I  A  S  S  *  F  G  F  </first_frame>
            <second_frame>  *  L  L  L  V  *  G  L  S  I  M  V  L  R  L  I  I  T  S  E  F  G  T  *  Q  L  K  L  I  V  I  F  F  L  R  *  T  *  K  Y  K  A  C  Q  N  S  N  I  L  N  A  Y  V  S  F  G  S  Y  *  M  I  P  H  V  K  T  C  L  F  Q  P  L  L  *  A  G  N  G  A  F  I  D  R  I  A  K  C  R  K  N  I  S  C  K  C  Y  C   : N  W  W  I  Q  *  R  H  D  T  N   : C  G  I  *  H  A  Q  S  D  E  R  K  C  H  Y  K  I  V  G  P  W  R  S  T  Q  I  P  Q  Y  V  G  A  L  L  S  C  C  F  C  Y  S  V  C  I  S  S  P  A  Y  I  T  V  F  A  F  T  D  R  C  E  M  N  P  F  I  H  S  F  R  R  *  H  M  I  L  L  L  R  I  E  M  N  L  L  H  G  L  L  M  N  S  F  I  E  S  H  G  L  P  V  L  F  G  A  *  Q  I  Y  I  F  M  P  S  I  G  G  I  L  D  L  D  H  L  C  V  F  K  G  M  M  L  N  M  L  L  P  *  E  F  *  Q  I  L  R  T  S  T  V  I  *  Y  T  *  I  L  I  L  *  P  R  A  N  L  V  S </second_frame>
            <third_frame>   S  Y  F  *  C  K  V  F  Q  L  W  C  C  V  S  L  L  L  Q  S  L  E  L  D  S  *  N  L  L  S  S  S  F  *  G  R  L  K  S  I  K  H  V  R  I  P  I  F  *  M  H  M  S  P  L  A  L  I  K  *  F  L  M  S  K  L  A  C  S  S  L  F  F  K  Q  E  M  E  L  S  L  I  G  L  Q  N  A  G  K  T  S  L  V  N  V  I  A  :  T  G  G  Y  S  E  D  M  I  P  T  :  V  G  F  N  M  R  K  V  T  K  G  N  V  T  I  K  L  W  D  L  G  G  Q  P  R  F  R  S  M  W  E  R  Y  C  R  A  V  S  A  I  V  Y  A  S  P  L  Q  L  I  L  L  Y  L  L  L  Q  I  D  V  R  *  I  H  L  Y  T  H  L  E  D  N  T  *  Y  S  Y  Y  E  L  R  *  I  F  S  M  V  Y  *  *  T  V  L  L  N  L  M  V  C  L  S  Y  L  V  L  D  R  F  I  F  L  C  L  R  *  V  E  F  L  I  L  I  I  Y  V  Y  L  K  E  *  C  *  I  C  C  S  L  K  S  F  N  K  F  *  G  P  Q  L  *  F  D  I  H  E  F  L  F  Y  S  L  E  L  I  W  F   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0030E13.1" strand="+"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="19230" stop="19340"/>
                    <exon start="19464" stop="19496"/>
                    <exon start="19605" stop="19787"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>324</number_coding_nucleotides>
                  <number_encoded_amino_acids>108</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FLMSKLACSSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYASPLQLILLYLLLQIDVR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="18649" e_stop="19029"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.992"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.992">
            <gDNA_exon_boundary e_start="18649" e_stop="19029" e_length="381"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18649" stop="19029"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U601984" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTTCCAGATTTGGCTGGACATTTTCCACCTAAATCCTTGTAGCTTTTGACTTTTCTAAGTTTCTTGCAAAAAAGTGAATTGTGTTCCATCGGAGTCATTGTTGTAGACAGACTCTTTGCCTGTTCAATGATTGACCACCTCGTATCAGAAAAATCAACTCTATATATGTGGTTGGAACACCTTTTAATATTTTTGAATGGACTAGACACTGACTGATGAAAGTGAAACCATTGATGCTTCCCCTTGACCTTTCATCATATACAAAACTTTTTCCTGAGGTTCAACTGGGTGATTCCAGAAATGACGACCAAAAATAACTTATATTTGACAGATTTTACAATGTCACCATCCATTATTCAGTCTTGTGTCATCCCACCATGC</gDNA_template>
            <first_frame> F  P  D  L  A  G  H  F  P  P  K  S  L  *  L  L  T  F  L  S  F  L  Q  K  S  E  L  C  S  I  G  V  I  V  V  D  R  L  F  A  C  S  M  I  D  H  L  V  S  E  K  S  T  L  Y  M  W  L  E  H  L  L  I  F  L  N  G  L  D  T  D  *  *  K  *  N  H  *  C  F  P  L  T  F  H  H  I  Q  N  F  F  L  R  F  N  W  V  I  P  E  M  T  T  K  N  N  L  Y  L  T  D  F  T  M  S  P  S  I  I  Q  S  C  V  I  P  P  C </first_frame>
            <second_frame>  F  Q  I  W  L  D  I  F  H  L  N  P  C  S  F  *  L  F  *  V  S  C  K  K  V  N  C  V  P  S  E  S  L  L  *  T  D  S  L  P  V  Q  *  L  T  T  S  Y  Q  K  N  Q  L  Y  I  C  G  W  N  T  F  *  Y  F  *  M  D  *  T  L  T  D  E  S  E  T  I  D  A  S  P  *  P  F  I  I  Y  K  T  F  S  *  G  S  T  G  *  F  Q  K  *  R  P  K  I  T  Y  I  *  Q  I  L  Q  C  H  H  P  L  F  S  L  V  S  S  H  H   </second_frame>
            <third_frame>   S  R  F  G  W  T  F  S  T  *  I  L  V  A  F  D  F  S  K  F  L  A  K  K  *  I  V  F  H  R  S  H  C  C  R  Q  T  L  C  L  F  N  D  *  P  P  R  I  R  K  I  N  S  I  Y  V  V  G  T  P  F  N  I  F  E  W  T  R  H  *  L  M  K  V  K  P  L  M  L  P  L  D  L  S  S  Y  T  K  L  F  P  E  V  Q  L  G  D  S  R  N  D  D  Q  K  *  L  I  F  D  R  F  Y  N  V  T  I  H  Y  S  V  L  C  H  P  T  M  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0030E13.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="16763" e_stop="16917"/>
            <exon e_start="19259" e_stop="19340"/>
            <exon e_start="19464" e_stop="19496"/>
            <exon e_start="19605" e_stop="19726"/>
            <exon e_start="20126" e_stop="20287"/>
            <exon e_start="20607" e_stop="20990"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.997" acc_prob="0.879" e_score="0.968"/>
          <exon-intron don_prob="0.949" acc_prob="0.974" e_score="1.000"/>
          <exon-intron don_prob="0.957" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.873" acc_prob="0.951" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.996" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.968">
            <gDNA_exon_boundary e_start="16763" e_stop="16917" e_length="155"/>
          </exon>
          <intron i_serial="1" don_prob="0.997" acc_prob="0.879">
            <gDNA_intron_boundary i_start="16918" i_stop="19258" i_length="2341"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="19259" e_stop="19340" e_length="82"/>
          </exon>
          <intron i_serial="2" don_prob="0.949" acc_prob="0.974">
            <gDNA_intron_boundary i_start="19341" i_stop="19463" i_length="123"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="19464" e_stop="19496" e_length="33"/>
          </exon>
          <intron i_serial="3" don_prob="0.957" acc_prob="1.000">
            <gDNA_intron_boundary i_start="19497" i_stop="19604" i_length="108"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="19605" e_stop="19726" e_length="122"/>
          </exon>
          <intron i_serial="4" don_prob="0.873" acc_prob="0.951">
            <gDNA_intron_boundary i_start="19727" i_stop="20125" i_length="399"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="20126" e_stop="20287" e_length="162"/>
          </exon>
          <intron i_serial="5" don_prob="0.000" acc_prob="0.996">
            <gDNA_intron_boundary i_start="20288" i_stop="20606" i_length="319"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="20607" e_stop="20990" e_length="384"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16763" stop="16917"/>
              <exon start="19259" stop="19340"/>
              <exon start="19464" stop="19496"/>
              <exon start="19605" stop="19726"/>
              <exon start="20126" stop="20287"/>
              <exon start="20607" stop="20990"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U571254" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TAAAGGGGGAAGGGGAAAAATACCGAGAGGGTATTTAATTGTGTTGTGTTTGAGAGGGATCTTTCTTCTTTATACTGATATTCAGATCTTTCTCTTTTACGATTCTTCGCATCAGCCATGGGTATCTGGGAAGCTTTTCTCAATTGGCTTCGAAG : CCTCTTCTTTAAGCAGGAAATGGAGCTTTCATTGATAGGATTGCAAAATGCAGGAAAAACATCTCTTGTAAATGTTATTGCA : ACTGGTGGATACAGTGAAGACATGATACCAACT : GTGGGATTTAACATGCGCAAAGTGACGAAAGGAAATGTCACTATAAAATTGTGGGACCTTGGAGGTCAACCCAGATTCCGCAGTATGTGGGAGCGTTACTGTCGTGCTGTTTCTGCTATAGT : TTATGTTGTTGATGCTGCTGATCCTGATAACCTCAGCATATCAAGTAGTGAACTCCATGACCTGTTGAGCAAGCCATCTCTGAGTGGTATTCCACTGCTGGTGCTGGGAAACAAAATTGACAAGCCTGATTCCCTTTCCAAACAGGCTTTGACTGAGCAGAT : GGGATTGAAATCAATAACTGATAGAGAAGTGTGCTGCTATATGATCTCGTGCAAGAATTCCACCAATATTGACTCAGTCATTGATTGGCTTGTTAAGCACTCGAAATCAAAGAGCTAAAGATGACTTTAACTTTTTCTTTTTTTTTGTAGTGGTGCTGATCTGTATGATAAATTTGCTGAGGCTATTGGTTTTTTCTGCTGGTTTCTCCAGAGTTCTCTTGTACTGTAAATTAAGTTATTTTGTCTATTGAGTGAGTTGTTACATGTTTTTTTTCTTGCCATTTTTCGTCTCAACTCTCTCTAATTGTGTTTGCAATTCCTCTTATACTTTTTACTTGTCTGCTGCACGAGTTTGTGTGAAAGGAACGGATCTTTTTAAGTTTT</gDNA_template>
            <first_frame> *  R  G  K  G  K  N  T  E  R  V  F  N  C  V  V  F  E  R  D  L  S  S  L  Y  *  Y  S  D  L  S  L  L  R  F  F  A  S  A  M  G  I  W  E  A  F  L  N  W  L  R  S :   L  F  F  K  Q  E  M  E  L  S  L  I  G  L  Q  N  A  G  K  T  S  L  V  N  V  I  A  :  T  G  G  Y  S  E  D  M  I  P  T  :  V  G  F  N  M  R  K  V  T  K  G  N  V  T  I  K  L  W  D  L  G  G  Q  P  R  F  R  S  M  W  E  R  Y  C  R  A  V  S  A  I  V :   Y  V  V  D  A  A  D  P  D  N  L  S  I  S  S  S  E  L  H  D  L  L  S  K  P  S  L  S  G  I  P  L  L  V  L  G  N  K  I  D  K  P  D  S  L  S  K  Q  A  L  T  E  Q  M :   G  L  K  S  I  T  D  R  E  V  C  C  Y  M  I  S  C  K  N  S  T  N  I  D  S  V  I  D  W  L  V  K  H  S  K  S  K  S  *  R  *  L  *  L  F  L  F  F  C  S  G  A  D  L  Y  D  K  F  A  E  A  I  G  F  F  C  W  F  L  Q  S  S  L  V  L  *  I  K  L  F  C  L  L  S  E  L  L  H  V  F  F  L  A  I  F  R  L  N  S  L  *  L  C  L  Q  F  L  L  Y  F  L  L  V  C  C  T  S  L  C  E  R  N  G  S  F  *  V   </first_frame>
            <second_frame>  K  G  G  R  G  K  I  P  R  G  Y  L  I  V  L  C  L  R  G  I  F  L  L  Y  T  D  I  Q  I  F  L  F  Y  D  S  S  H  Q  P  W  V  S  G  K  L  F  S  I  G  F  E   : A  S  S  L  S  R  K  W  S  F  H  *  *  D  C  K  M  Q  E  K  H  L  L  *  M  L  L  Q :   L  V  D  T  V  K  T  *  Y  Q  L :   W  D  L  T  C  A  K  *  R  K  E  M  S  L  *  N  C  G  T  L  E  V  N  P  D  S  A  V  C  G  S  V  T  V  V  L  F  L  L  *   : F  M  L  L  M  L  L  I  L  I  T  S  A  Y  Q  V  V  N  S  M  T  C  *  A  S  H  L  *  V  V  F  H  C  W  C  W  E  T  K  L  T  S  L  I  P  F  P  N  R  L  *  L  S  R   : W  D  *  N  Q  *  L  I  E  K  C  A  A  I  *  S  R  A  R  I  P  P  I  L  T  Q  S  L  I  G  L  L  S  T  R  N  Q  R  A  K  D  D  F  N  F  F  F  F  F  V  V  V  L  I  C  M  I  N  L  L  R  L  L  V  F  S  A  G  F  S  R  V  L  L  Y  C  K  L  S  Y  F  V  Y  *  V  S  C  Y  M  F  F  F  L  P  F  F  V  S  T  L  S  N  C  V  C  N  S  S  Y  T  F  Y  L  S  A  A  R  V  C  V  K  G  T  D  L  F  K  F  </second_frame>
            <third_frame>   K  G  E  G  E  K  Y  R  E  G  I  *  L  C  C  V  *  E  G  S  F  F  F  I  L  I  F  R  S  F  S  F  T  I  L  R  I  S  H  G  Y  L  G  S  F  S  Q  L  A  S  K  :  P  L  L  *  A  G  N  G  A  F  I  D  R  I  A  K  C  R  K  N  I  S  C  K  C  Y  C   : N  W  W  I  Q  *  R  H  D  T  N   : C  G  I  *  H  A  Q  S  D  E  R  K  C  H  Y  K  I  V  G  P  W  R  S  T  Q  I  P  Q  Y  V  G  A  L  L  S  C  C  F  C  Y  S  :  L  C  C  *  C  C  *  S  *  *  P  Q  H  I  K  *  *  T  P  *  P  V  E  Q  A  I  S  E  W  Y  S  T  A  G  A  G  K  Q  N  *  Q  A  *  F  P  F  Q  T  G  F  D  *  A  D  :  G  I  E  I  N  N  *  *  R  S  V  L  L  Y  D  L  V  Q  E  F  H  Q  Y  *  L  S  H  *  L  A  C  *  A  L  E  I  K  E  L  K  M  T  L  T  F  S  F  F  L  *  W  C  *  S  V  *  *  I  C  *  G  Y  W  F  F  L  L  V  S  P  E  F  S  C  T  V  N  *  V  I  L  S  I  E  *  V  V  T  C  F  F  S  C  H  F  S  S  Q  L  S  L  I  V  F  A  I  P  L  I  L  F  T  C  L  L  H  E  F  V  *  K  E  R  I  F  L  S  F </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0030E13.1" strand="+"/>
                <serials PGL_serial="3" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="16841" stop="16917"/>
                    <exon start="19259" stop="19340"/>
                    <exon start="19464" stop="19496"/>
                    <exon start="19605" stop="19726"/>
                    <exon start="20126" stop="20287"/>
                    <exon start="20607" stop="20724"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>591</number_coding_nucleotides>
                  <number_encoded_amino_acids>197</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>YSDLSLLRFFASAMGIWEAFLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADPDNLSISSSELHDLLSKPSLSGIPLLVLGNKIDKPDSLSKQALTEQMGLKSITDREVCCYMISCKNSTNIDSVIDWLVKHSKSKS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="-" PGL_start="35411" PGL_stop="30808"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="35411" e_stop="35169"/>
            <exon e_start="34638" e_stop="33559"/>
            <exon e_start="31669" e_stop="31502"/>
            <exon e_start="30890" e_stop="30808"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.989" acc_prob="0.969" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.980" e_score="1.000"/>
          <exon-only e_score="0.988"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="35411" e_stop="35169" e_length="243"/>
          </exon>
          <intron i_serial="1" don_prob="0.989" acc_prob="0.969">
            <gDNA_intron_boundary i_start="35168" i_stop="34639" i_length="530"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="34638" e_stop="33559" e_length="1080"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="0.989">
            <gDNA_intron_boundary i_start="33558" i_stop="31670" i_length="1889"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="31669" e_stop="31502" e_length="168"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="0.980">
            <gDNA_intron_boundary i_start="31501" i_stop="30891" i_length="611"/>
          </intron>
          <exon e_serial="4" e_score="0.988">
            <gDNA_exon_boundary e_start="30890" e_stop="30808" e_length="83"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="35411" stop="35169"/>
              <exon start="34638" stop="33559"/>
              <exon start="31669" stop="31502"/>
              <exon start="30890" stop="30808"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U583701" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCAATTTTTTCTAGCTTTAGAAAAACGGCTGCTTCTACAGCACCTTGTTTCTTACAAAGAAAATGGGCAGGCTCTTAATAAGAGGGGTGCGTTTGGCGGCAACTATATAAAACAATTTGGGGAGGCTCAATTATCATCACGAGTAAATTTTGGGTTCTAGGGTTTCAAATTTGATCATTCACCATTGTCGACGAAACACGATGGTTTAACTTCTGTTGAGAGGCGATTTATTTGTTCTTCCTG : GTACAGCAGTGGTTAAGCATATAGAGGTCTCTCATTCTTGCAATGAACTCGGAAAGGAAATGTAGTGTGACAACCATGGGCGACCAAGACCAATCTCCTAGCAGTTCTGGTGATGATGGACATTCTAAAGGCCAGATTCTTGAAAACCCACCTCAGGAAAAAGTGAACATTGAGACAGAAAGTGAAGAAACTGGCATTGATTGGATCAGCGAGCTACCTGACGCTCTAATTGTACAAATTCTCTCTCTATTGCCCATACAAGATGCTTTCAGAACATCTGTTCTCTCTAAACGTTGGCAATACCCCTGGACTTCTATAGACAACCTTATTTTTGACAACCGAAATACCAATTGGTCCAATAGAGAGAATGTGATTAATAAGTTCATTTCCTTCACAGACAATGTACTACCTCTCCTTTGCTGCTCTAATATTAAAAAGTTCTGTCTATATTTCCGATTTTGCCTTGTTGCTTCTTATAGTTCCAAAATTGACAAGTGGCTTGAAATTGTTTTGAAGAAAAAAGTGGAGGATCTTGACCTGGAAATATGGTATTATGATCAAAGCCCCTATGTCTTGCCACAAGTTCTCTGCAACAACTCATCCATTGTAAAATTTAATTGCGAGTTTTGCAGAATACCAGAAGAATGTGTACTAAACTGGACATCCCTGAAGAGTTTGACACTAACCTATTTGTTTCTTCGGGACGAACATGTTGAACAAATAGTAACAAATTGTCCTCAGTTGGAATTGTTGAAGCTATGTGAGTTTTGTGGTTTTCATCGCTTACATATAACTTCTCCAAAATGTAGGAGTCTGCAATTGATTGATCATGCCCATCCTGATGGAGATTGGGGTCCATTTGGCGGTGATTGTTCCTTCGAAGTAGTTGCCCCATATATTCAACATCTAAAGATTTCGGGGCATTTTGATAATGTGGAAATAAGACTTGGGGACCTTTCATCTTTAGTCATTGCTGATCTTACTTTCTCTGTTGATATTGTATATGACAATACCGTGGAACTTCTCTTGGCAAGTGTACGTTGTGCTAATGAGCTAATGATCCCATGCTGGTTTATCGAG : ATGATTTATGTGGCGGTGATAGAAAAGAAGAAAGATGTTCCATTTCTGATGCGGAAGTGCAAACGGTTGACGATAAATTCTTGGATTTCAAAAAATGCCATTCTCGGCATAGGTGTTCTCTTAAAGTCAACTCCTTATCTGGAGAATTTGACGATACTTCATGAAGAG : GGAGATTTCTTTGTCTGGGATGAATACTTGGAAGAAGAAGTGTTTGATTGGTTAGGAGACAAATCCCTCTCCTTGCATGAAAA</gDNA_template>
            <first_frame> S  I  F  S  S  F  R  K  T  A  A  S  T  A  P  C  F  L  Q  R  K  W  A  G  S  *  *  E  G  C  V  W  R  Q  L  Y  K  T  I  W  G  G  S  I  I  I  T  S  K  F  W  V  L  G  F  Q  I  *  S  F  T  I  V  D  E  T  R  W  F  N  F  C  *  E  A  I  Y  L  F  F  L  :  V  Q  Q  W  L  S  I  *  R  S  L  I  L  A  M  N  S  E  R  K  C  S  V  T  T  M  G  D  Q  D  Q  S  P  S  S  S  G  D  D  G  H  S  K  G  Q  I  L  E  N  P  P  Q  E  K  V  N  I  E  T  E  S  E  E  T  G  I  D  W  I  S  E  L  P  D  A  L  I  V  Q  I  L  S  L  L  P  I  Q  D  A  F  R  T  S  V  L  S  K  R  W  Q  Y  P  W  T  S  I  D  N  L  I  F  D  N  R  N  T  N  W  S  N  R  E  N  V  I  N  K  F  I  S  F  T  D  N  V  L  P  L  L  C  C  S  N  I  K  K  F  C  L  Y  F  R  F  C  L  V  A  S  Y  S  S  K  I  D  K  W  L  E  I  V  L  K  K  K  V  E  D  L  D  L  E  I  W  Y  Y  D  Q  S  P  Y  V  L  P  Q  V  L  C  N  N  S  S  I  V  K  F  N  C  E  F  C  R  I  P  E  E  C  V  L  N  W  T  S  L  K  S  L  T  L  T  Y  L  F  L  R  D  E  H  V  E  Q  I  V  T  N  C  P  Q  L  E  L  L  K  L  C  E  F  C  G  F  H  R  L  H  I  T  S  P  K  C  R  S  L  Q  L  I  D  H  A  H  P  D  G  D  W  G  P  F  G  G  D  C  S  F  E  V  V  A  P  Y  I  Q  H  L  K  I  S  G  H  F  D  N  V  E  I  R  L  G  D  L  S  S  L  V  I  A  D  L  T  F  S  V  D  I  V  Y  D  N  T  V  E  L  L  L  A  S  V  R  C  A  N  E  L  M  I  P  C  W  F  I  E  :  M  I  Y  V  A  V  I  E  K  K  K  D  V  P  F  L  M  R  K  C  K  R  L  T  I  N  S  W  I  S  K  N  A  I  L  G  I  G  V  L  L  K  S  T  P  Y  L  E  N  L  T  I  L  H  E  E  :  G  D  F  F  V  W  D  E  Y  L  E  E  E  V  F  D  W  L  G  D  K  S  L  S  L  H  E   </first_frame>
            <second_frame>  Q  F  F  L  A  L  E  K  R  L  L  L  Q  H  L  V  S  Y  K  E  N  G  Q  A  L  N  K  R  G  A  F  G  G  N  Y  I  K  Q  F  G  E  A  Q  L  S  S  R  V  N  F  G  F  *  G  F  K  F  D  H  S  P  L  S  T  K  H  D  G  L  T  S  V  E  R  R  F  I  C  S  S  W :   Y  S  S  G  *  A  Y  R  G  L  S  F  L  Q  *  T  R  K  G  N  V  V  *  Q  P  W  A  T  K  T  N  L  L  A  V  L  V  M  M  D  I  L  K  A  R  F  L  K  T  H  L  R  K  K  *  T  L  R  Q  K  V  K  K  L  A  L  I  G  S  A  S  Y  L  T  L  *  L  Y  K  F  S  L  Y  C  P  Y  K  M  L  S  E  H  L  F  S  L  N  V  G  N  T  P  G  L  L  *  T  T  L  F  L  T  T  E  I  P  I  G  P  I  E  R  M  *  L  I  S  S  F  P  S  Q  T  M  Y  Y  L  S  F  A  A  L  I  L  K  S  S  V  Y  I  S  D  F  A  L  L  L  L  I  V  P  K  L  T  S  G  L  K  L  F  *  R  K  K  W  R  I  L  T  W  K  Y  G  I  M  I  K  A  P  M  S  C  H  K  F  S  A  T  T  H  P  L  *  N  L  I  A  S  F  A  E  Y  Q  K  N  V  Y  *  T  G  H  P  *  R  V  *  H  *  P  I  C  F  F  G  T  N  M  L  N  K  *  *  Q  I  V  L  S  W  N  C  *  S  Y  V  S  F  V  V  F  I  A  Y  I  *  L  L  Q  N  V  G  V  C  N  *  L  I  M  P  I  L  M  E  I  G  V  H  L  A  V  I  V  P  S  K  *  L  P  H  I  F  N  I  *  R  F  R  G  I  L  I  M  W  K  *  D  L  G  T  F  H  L  *  S  L  L  I  L  L  S  L  L  I  L  Y  M  T  I  P  W  N  F  S  W  Q  V  Y  V  V  L  M  S  *  *  S  H  A  G  L  S  R :   *  F  M  W  R  *  *  K  R  R  K  M  F  H  F  *  C  G  S  A  N  G  *  R  *  I  L  G  F  Q  K  M  P  F  S  A  *  V  F  S  *  S  Q  L  L  I  W  R  I  *  R  Y  F  M  K  R :   E  I  S  L  S  G  M  N  T  W  K  K  K  C  L  I  G  *  E  T  N  P  S  P  C  M  K  </second_frame>
            <third_frame>   N  F  F  *  L  *  K  N  G  C  F  Y  S  T  L  F  L  T  K  K  M  G  R  L  L  I  R  G  V  R  L  A  A  T  I  *  N  N  L  G  R  L  N  Y  H  H  E  *  I  L  G  S  R  V  S  N  L  I  I  H  H  C  R  R  N  T  M  V  *  L  L  L  R  G  D  L  F  V  L  P   : G  T  A  V  V  K  H  I  E  V  S  H  S  C  N  E  L  G  K  E  M  *  C  D  N  H  G  R  P  R  P  I  S  *  Q  F  W  *  *  W  T  F  *  R  P  D  S  *  K  P  T  S  G  K  S  E  H  *  D  R  K  *  R  N  W  H  *  L  D  Q  R  A  T  *  R  S  N  C  T  N  S  L  S  I  A  H  T  R  C  F  Q  N  I  C  S  L  *  T  L  A  I  P  L  D  F  Y  R  Q  P  Y  F  *  Q  P  K  Y  Q  L  V  Q  *  R  E  C  D  *  *  V  H  F  L  H  R  Q  C  T  T  S  P  L  L  L  *  Y  *  K  V  L  S  I  F  P  I  L  P  C  C  F  L  *  F  Q  N  *  Q  V  A  *  N  C  F  E  E  K  S  G  G  S  *  P  G  N  M  V  L  *  S  K  P  L  C  L  A  T  S  S  L  Q  Q  L  I  H  C  K  I  *  L  R  V  L  Q  N  T  R  R  M  C  T  K  L  D  I  P  E  E  F  D  T  N  L  F  V  S  S  G  R  T  C  *  T  N  S  N  K  L  S  S  V  G  I  V  E  A  M  *  V  L  W  F  S  S  L  T  Y  N  F  S  K  M  *  E  S  A  I  D  *  S  C  P  S  *  W  R  L  G  S  I  W  R  *  L  F  L  R  S  S  C  P  I  Y  S  T  S  K  D  F  G  A  F  *  *  C  G  N  K  T  W  G  P  F  I  F  S  H  C  *  S  Y  F  L  C  *  Y  C  I  *  Q  Y  R  G  T  S  L  G  K  C  T  L  C  *  *  A  N  D  P  M  L  V  Y  R   : D  D  L  C  G  G  D  R  K  E  E  R  C  S  I  S  D  A  E  V  Q  T  V  D  D  K  F  L  D  F  K  K  C  H  S  R  H  R  C  S  L  K  V  N  S  L  S  G  E  F  D  D  T  S  *  R   : G  R  F  L  C  L  G  *  I  L  G  R  R  S  V  *  L  V  R  R  Q  I  P  L  L  A  *  K </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0030E13.1" strand="-"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="34614" stop="33559"/>
                    <exon start="31669" stop="31502"/>
                    <exon start="30890" stop="30810"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1305</number_coding_nucleotides>
                  <number_encoded_amino_acids>435</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RSLILAMNSERKCSVTTMGDQDQSPSSSGDDGHSKGQILENPPQEKVNIETESEETGIDWISELPDALIVQILSLLPIQDAFRTSVLSKRWQYPWTSIDNLIFDNRNTNWSNRENVINKFISFTDNVLPLLCCSNIKKFCLYFRFCLVASYSSKIDKWLEIVLKKKVEDLDLEIWYYDQSPYVLPQVLCNNSSIVKFNCEFCRIPEECVLNWTSLKSLTLTYLFLRDEHVEQIVTNCPQLELLKLCEFCGFHRLHITSPKCRSLQLIDHAHPDGDWGPFGGDCSFEVVAPYIQHLKISGHFDNVEIRLGDLSSLVIADLTFSVDIVYDNTVELLLASVRCANELMIPCWFIEMIYVAVIEKKKDVPFLMRKCKRLTINSWISKNAILGIGVLLKSTPYLENLTILHEEGDFFVWDEYLEEEVFDWLGDKSLSLHE</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="+" PGL_start="37799" PGL_stop="42484"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="37799" e_stop="38017"/>
            <exon e_start="38925" e_stop="39013"/>
            <exon e_start="40706" e_stop="40835"/>
            <exon e_start="41605" e_stop="41634"/>
            <exon e_start="42115" e_stop="42484"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.950" e_score="1.000"/>
          <exon-intron don_prob="0.990" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.961" acc_prob="0.980" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="0.962"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="37799" e_stop="38017" e_length="219"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.950">
            <gDNA_intron_boundary i_start="38018" i_stop="38924" i_length="907"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="38925" e_stop="39013" e_length="89"/>
          </exon>
          <intron i_serial="2" don_prob="0.990" acc_prob="0.999">
            <gDNA_intron_boundary i_start="39014" i_stop="40705" i_length="1692"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="40706" e_stop="40835" e_length="130"/>
          </exon>
          <intron i_serial="3" don_prob="0.961" acc_prob="0.980">
            <gDNA_intron_boundary i_start="40836" i_stop="41604" i_length="769"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="41605" e_stop="41634" e_length="30"/>
          </exon>
          <intron i_serial="4" don_prob="0.994" acc_prob="1.000">
            <gDNA_intron_boundary i_start="41635" i_stop="42114" i_length="480"/>
          </intron>
          <exon e_serial="5" e_score="0.962">
            <gDNA_exon_boundary e_start="42115" e_stop="42484" e_length="370"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37799" stop="38017"/>
              <exon start="38925" stop="39013"/>
              <exon start="40706" stop="40835"/>
              <exon start="41605" stop="41634"/>
              <exon start="42115" stop="42450"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U580455" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37847" stop="38017"/>
              <exon start="38925" stop="39013"/>
              <exon start="40706" stop="40835"/>
              <exon start="41605" stop="41634"/>
              <exon start="42115" stop="42484"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U591154" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GGCAAAGTAATATCTGGCTTCATCACTTCGGCCGGATTCTATCATCTCAGGCAAATGGCTAGCTCTCTCCGACGACTAGCGACGCATTCCTCTCAAGCCGCCTGGCGATCTTCTGTGACGCCGCTATGTAGACAATTTGCGTCAGAAGCGTTGGTCGAAATCAAGCCCGGAGAGATCGGTATGGTCTCTGGTATTCCAGATGAACATCTTCGTAGAAGG : GTTGTGATTTTCTCTCCTGCTCGGACTGCTAGTCAACAAGGCTCTGGAAAAGTTGGCAGATGGAAAATCAATTTCATGTCTACCCAGAA : ATGGGAGAATCCATTGATGGGGTGGACATCCACAGGGGATCCATATGCCAATGTTGGTGATTCAGCTCTTAGTTTTGAGAGTGAAGAAGCTGCAAAAGCATTCGCTGAAAAGCATGGTTGGGAATATACG : GTGAAGAAACGACACACACCATTGTTAAAG : ATCAAGTCATATGCGGACAACTTTAAGTGGAAGGGACCTCCCAAGGCAGCAGAATAATTTATTTTCTACTTCAATTCAAGTACTTGAGGTGCTTGTGGATGTTCTACCTAATGCCCTGCATTCTGTTTTCTTTTTTTTTTTACCTTCTCTAAAGTTGGGCAGATCTCCTTCTTGAAGGATTTAATAAATCAAACTTATGAAAATCCACAAGTACATGCAATGTCTTAAAACCTTTGTGAAGCAATTTCCGGGTGTTTCTGTACTTGTGGGACATTGTGTCGTGTCAAAACACTAGTAGCCTTGTTTTTCTCTCCAAAAGAAATTAGCGTGTCAAAATACTTACGAACTGTGATTGTCGGTTGAGTTTGTT</gDNA_template>
            <first_frame> G  K  V  I  S  G  F  I  T  S  A  G  F  Y  H  L  R  Q  M  A  S  S  L  R  R  L  A  T  H  S  S  Q  A  A  W  R  S  S  V  T  P  L  C  R  Q  F  A  S  E  A  L  V  E  I  K  P  G  E  I  G  M  V  S  G  I  P  D  E  H  L  R  R  R  :  V  V  I  F  S  P  A  R  T  A  S  Q  Q  G  S  G  K  V  G  R  W  K  I  N  F  M  S  T  Q  K :   W  E  N  P  L  M  G  W  T  S  T  G  D  P  Y  A  N  V  G  D  S  A  L  S  F  E  S  E  E  A  A  K  A  F  A  E  K  H  G  W  E  Y  T  :  V  K  K  R  H  T  P  L  L  K  :  I  K  S  Y  A  D  N  F  K  W  K  G  P  P  K  A  A  E  *  F  I  F  Y  F  N  S  S  T  *  G  A  C  G  C  S  T  *  C  P  A  F  C  F  L  F  F  F  T  F  S  K  V  G  Q  I  S  F  L  K  D  L  I  N  Q  T  Y  E  N  P  Q  V  H  A  M  S  *  N  L  C  E  A  I  S  G  C  F  C  T  C  G  T  L  C  R  V  K  T  L  V  A  L  F  F  S  P  K  E  I  S  V  S  K  Y  L  R  T  V  I  V  G  *  V  C  </first_frame>
            <second_frame>  A  K  *  Y  L  A  S  S  L  R  P  D  S  I  I  S  G  K  W  L  A  L  S  D  D  *  R  R  I  P  L  K  P  P  G  D  L  L  *  R  R  Y  V  D  N  L  R  Q  K  R  W  S  K  S  S  P  E  R  S  V  W  S  L  V  F  Q  M  N  I  F  V  E  G :   L  *  F  S  L  L  L  G  L  L  V  N  K  A  L  E  K  L  A  D  G  K  S  I  S  C  L  P  R   : N  G  R  I  H  *  W  G  G  H  P  Q  G  I  H  M  P  M  L  V  I  Q  L  L  V  L  R  V  K  K  L  Q  K  H  S  L  K  S  M  V  G  N  I  R :   *  R  N  D  T  H  H  C  *  R :   S  S  H  M  R  T  T  L  S  G  R  D  L  P  R  Q  Q  N  N  L  F  S  T  S  I  Q  V  L  E  V  L  V  D  V  L  P  N  A  L  H  S  V  F  F  F  F  L  P  S  L  K  L  G  R  S  P  S  *  R  I  *  *  I  K  L  M  K  I  H  K  Y  M  Q  C  L  K  T  F  V  K  Q  F  P  G  V  S  V  L  V  G  H  C  V  V  S  K  H  *  *  P  C  F  S  L  Q  K  K  L  A  C  Q  N  T  Y  E  L  *  L  S  V  E  F  V </second_frame>
            <third_frame>   Q  S  N  I  W  L  H  H  F  G  R  I  L  S  S  Q  A  N  G  *  L  S  P  T  T  S  D  A  F  L  S  S  R  L  A  I  F  C  D  A  A  M  *  T  I  C  V  R  S  V  G  R  N  Q  A  R  R  D  R  Y  G  L  W  Y  S  R  *  T  S  S  *  K   : G  C  D  F  L  S  C  S  D  C  *  S  T  R  L  W  K  S  W  Q  M  E  N  Q  F  H  V  Y  P  E  :  M  G  E  S  I  D  G  V  D  I  H  R  G  S  I  C  Q  C  W  *  F  S  S  *  F  *  E  *  R  S  C  K  S  I  R  *  K  A  W  L  G  I  Y   : G  E  E  T  T  H  T  I  V  K   : D  Q  V  I  C  G  Q  L  *  V  E  G  T  S  Q  G  S  R  I  I  Y  F  L  L  Q  F  K  Y  L  R  C  L  W  M  F  Y  L  M  P  C  I  L  F  S  F  F  F  Y  L  L  *  S  W  A  D  L  L  L  E  G  F  N  K  S  N  L  *  K  S  T  S  T  C  N  V  L  K  P  L  *  S  N  F  R  V  F  L  Y  L  W  D  I  V  S  C  Q  N  T  S  S  L  V  F  L  S  K  R  N  *  R  V  K  I  L  T  N  C  D  C  R  L  S  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0030E13.1" strand="+"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="37799" stop="38017"/>
                    <exon start="38925" stop="39013"/>
                    <exon start="40706" stop="40835"/>
                    <exon start="41605" stop="41634"/>
                    <exon start="42115" stop="42171"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>522</number_coding_nucleotides>
                  <number_encoded_amino_acids>174</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GKVISGFITSAGFYHLRQMASSLRRLATHSSQAAWRSSVTPLCRQFASEALVEIKPGEIGMVSGIPDEHLRRRVVIFSPARTASQQGSGKVGRWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFESEEAAKAFAEKHGWEYTVKKRHTPLLKIKSYADNFKWKGPPKAAE*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="37860" e_stop="38589"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.993"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.993">
            <gDNA_exon_boundary e_start="37860" e_stop="38589" e_length="730"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37860" stop="38589"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U592850" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GCTCTCTCCGACGACTAGCGACGCATTCCTCTCAAGCCGCCTGGCGATCTTCTGTGACGCCGCTATGTAGACAATTTGCGTCAGAAGCGTTGGTCGAAATCAAGCCCGGAGAGATCGGTATGGTCTCTGGTATTCCAGATGAACATCTTCGTAGAAGGGTATAATTTCTTTTCTTTATGTCTCTTCGCTAATATCTATTATTTTGTCAGGTCATTTAGGTGTATGAAAAACTTCATTGTAGGTTACCAATTTATTAGGGCTTCTATAGCAGATCCATGGGTTCCGCTATTTAGGGTTAGCAAATGATTTGGGAAATGGATATGGAGGATCCATATAGTTAGAATCAATTGATTTGAAATTGATATAGTTGATTGATTGCTTTTCATTTTTGCCTTTGTGAATTTATGTTACCTCTAATCCGAAGACTATTCCTTTTTAGCCCTCCTTTTGTCTTCCTCGCTCCTATTCAATGATATAGAAGAGACCATAGCTGCTTAGACACTTGTGACAAGTAAAAAGTTGTAAGTTTTCATGGTAGGGAGTAGTTTCTGCTTGGCAAGTATTAAGTTGAACTTGGACCTTCTAGAGCTTGAATTGATAAGCCTTAATATCAGACCCCAGCTTGGATTAATGCAAACTTTTTCCCCACGGAGGTTTTTCATCCATTTCTGCACAAATTTAGTTATATAGATTTCTTATCAAATCTATAATCTGATCTATATCATCTATA</gDNA_template>
            <first_frame> A  L  S  D  D  *  R  R  I  P  L  K  P  P  G  D  L  L  *  R  R  Y  V  D  N  L  R  Q  K  R  W  S  K  S  S  P  E  R  S  V  W  S  L  V  F  Q  M  N  I  F  V  E  G  Y  N  F  F  S  L  C  L  F  A  N  I  Y  Y  F  V  R  S  F  R  C  M  K  N  F  I  V  G  Y  Q  F  I  R  A  S  I  A  D  P  W  V  P  L  F  R  V  S  K  *  F  G  K  W  I  W  R  I  H  I  V  R  I  N  *  F  E  I  D  I  V  D  *  L  L  F  I  F  A  F  V  N  L  C  Y  L  *  S  E  D  Y  S  F  L  A  L  L  L  S  S  S  L  L  F  N  D  I  E  E  T  I  A  A  *  T  L  V  T  S  K  K  L  *  V  F  M  V  G  S  S  F  C  L  A  S  I  K  L  N  L  D  L  L  E  L  E  L  I  S  L  N  I  R  P  Q  L  G  L  M  Q  T  F  S  P  R  R  F  F  I  H  F  C  T  N  L  V  I  *  I  S  Y  Q  I  Y  N  L  I  Y  I  I  Y  </first_frame>
            <second_frame>  L  S  P  T  T  S  D  A  F  L  S  S  R  L  A  I  F  C  D  A  A  M  *  T  I  C  V  R  S  V  G  R  N  Q  A  R  R  D  R  Y  G  L  W  Y  S  R  *  T  S  S  *  K  G  I  I  S  F  L  Y  V  S  S  L  I  S  I  I  L  S  G  H  L  G  V  *  K  T  S  L  *  V  T  N  L  L  G  L  L  *  Q  I  H  G  F  R  Y  L  G  L  A  N  D  L  G  N  G  Y  G  G  S  I  *  L  E  S  I  D  L  K  L  I  *  L  I  D  C  F  S  F  L  P  L  *  I  Y  V  T  S  N  P  K  T  I  P  F  *  P  S  F  C  L  P  R  S  Y  S  M  I  *  K  R  P  *  L  L  R  H  L  *  Q  V  K  S  C  K  F  S  W  *  G  V  V  S  A  W  Q  V  L  S  *  T  W  T  F  *  S  L  N  *  *  A  L  I  S  D  P  S  L  D  *  C  K  L  F  P  H  G  G  F  S  S  I  S  A  Q  I  *  L  Y  R  F  L  I  K  S  I  I  *  S  I  S  S  I </second_frame>
            <third_frame>   S  L  R  R  L  A  T  H  S  S  Q  A  A  W  R  S  S  V  T  P  L  C  R  Q  F  A  S  E  A  L  V  E  I  K  P  G  E  I  G  M  V  S  G  I  P  D  E  H  L  R  R  R  V  *  F  L  F  F  M  S  L  R  *  Y  L  L  F  C  Q  V  I  *  V  Y  E  K  L  H  C  R  L  P  I  Y  *  G  F  Y  S  R  S  M  G  S  A  I  *  G  *  Q  M  I  W  E  M  D  M  E  D  P  Y  S  *  N  Q  L  I  *  N  *  Y  S  *  L  I  A  F  H  F  C  L  C  E  F  M  L  P  L  I  R  R  L  F  L  F  S  P  P  F  V  F  L  A  P  I  Q  *  Y  R  R  D  H  S  C  L  D  T  C  D  K  *  K  V  V  S  F  H  G  R  E  *  F  L  L  G  K  Y  *  V  E  L  G  P  S  R  A  *  I  D  K  P  *  Y  Q  T  P  A  W  I  N  A  N  F  F  P  T  E  V  F  H  P  F  L  H  K  F  S  Y  I  D  F  L  S  N  L  *  S  D  L  Y  H  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0030E13.1" strand="+"/>
                <serials PGL_serial="5" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="37917" stop="38165"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>246</number_coding_nucleotides>
                  <number_encoded_amino_acids>82</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RRYVDNLRQKRWSKSSPERSVWSLVFQMNIFVEGYNFFSLCLFANIYYFVRSFRCMKNFIVGYQFIRASIADPWVPLFRVSK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="-" PGL_start="49846" PGL_stop="43089"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="49846" e_stop="49259"/>
            <exon e_start="49154" e_stop="49067"/>
            <exon e_start="48519" e_stop="48314"/>
            <exon e_start="48144" e_stop="47993"/>
            <exon e_start="47152" e_stop="46732"/>
            <exon e_start="46223" e_stop="46126"/>
            <exon e_start="45564" e_stop="45453"/>
            <exon e_start="45343" e_stop="45184"/>
            <exon e_start="44749" e_stop="44677"/>
            <exon e_start="43524" e_stop="43089"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.972" e_score="1.000"/>
          <exon-intron don_prob="0.987" acc_prob="0.973" e_score="0.995"/>
          <exon-intron don_prob="0.458" acc_prob="0.999" e_score="0.980"/>
          <exon-intron don_prob="0.974" acc_prob="0.999" e_score="0.995"/>
          <exon-intron don_prob="0.921" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.958" acc_prob="0.980" e_score="0.973"/>
          <exon-intron don_prob="0.986" acc_prob="0.987" e_score="0.994"/>
          <exon-intron don_prob="0.993" acc_prob="0.604" e_score="0.986"/>
          <exon-only e_score="0.993"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="49846" e_stop="49259" e_length="588"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.992">
            <gDNA_intron_boundary i_start="49258" i_stop="49155" i_length="104"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="49154" e_stop="49067" e_length="88"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.972">
            <gDNA_intron_boundary i_start="49066" i_stop="48520" i_length="547"/>
          </intron>
          <exon e_serial="3" e_score="0.995">
            <gDNA_exon_boundary e_start="48519" e_stop="48314" e_length="206"/>
          </exon>
          <intron i_serial="3" don_prob="0.987" acc_prob="0.973">
            <gDNA_intron_boundary i_start="48313" i_stop="48145" i_length="169"/>
          </intron>
          <exon e_serial="4" e_score="0.980">
            <gDNA_exon_boundary e_start="48144" e_stop="47993" e_length="152"/>
          </exon>
          <intron i_serial="4" don_prob="0.458" acc_prob="0.999">
            <gDNA_intron_boundary i_start="47992" i_stop="47153" i_length="840"/>
          </intron>
          <exon e_serial="5" e_score="0.995">
            <gDNA_exon_boundary e_start="47152" e_stop="46732" e_length="421"/>
          </exon>
          <intron i_serial="5" don_prob="0.974" acc_prob="0.999">
            <gDNA_intron_boundary i_start="46731" i_stop="46224" i_length="508"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="46223" e_stop="46126" e_length="98"/>
          </exon>
          <intron i_serial="6" don_prob="0.921" acc_prob="0.992">
            <gDNA_intron_boundary i_start="46125" i_stop="45565" i_length="561"/>
          </intron>
          <exon e_serial="7" e_score="0.973">
            <gDNA_exon_boundary e_start="45564" e_stop="45453" e_length="112"/>
          </exon>
          <intron i_serial="7" don_prob="0.958" acc_prob="0.980">
            <gDNA_intron_boundary i_start="45452" i_stop="45344" i_length="109"/>
          </intron>
          <exon e_serial="8" e_score="0.994">
            <gDNA_exon_boundary e_start="45343" e_stop="45184" e_length="160"/>
          </exon>
          <intron i_serial="8" don_prob="0.986" acc_prob="0.987">
            <gDNA_intron_boundary i_start="45183" i_stop="44750" i_length="434"/>
          </intron>
          <exon e_serial="9" e_score="0.986">
            <gDNA_exon_boundary e_start="44749" e_stop="44677" e_length="73"/>
          </exon>
          <intron i_serial="9" don_prob="0.993" acc_prob="0.604">
            <gDNA_intron_boundary i_start="44676" i_stop="43525" i_length="1152"/>
          </intron>
          <exon e_serial="10" e_score="0.993">
            <gDNA_exon_boundary e_start="43524" e_stop="43089" e_length="436"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49846" stop="49259"/>
              <exon start="49154" stop="49067"/>
              <exon start="48519" stop="48314"/>
              <exon start="48144" stop="47993"/>
              <exon start="47152" stop="46732"/>
              <exon start="46223" stop="46126"/>
              <exon start="45564" stop="45525"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U565025" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="45564" stop="45453"/>
              <exon start="45343" stop="45184"/>
              <exon start="44749" stop="44677"/>
              <exon start="43524" stop="43160"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U565023" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44724" stop="44677"/>
              <exon start="43524" stop="43089"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U587683" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GTTTGATGTTTTAGAAGGCTAGATAGAGTATGATATTTAGAAAAAAAATAGGGCTGCCGACTGACGGCCAAAGTTATTATTGAACATATGCACCAGTCAAACATATACGTGGCGAGTCGTTGGTTACCGGTATAAATTCTTCCAACTCCACCTACCCCCAACGCCACCCCATTCACCAGGCAGCTGCCATAGCCCGCTGCCGTCAAAAAGCCCACTACAGTATCGGAGTTCGGCGTGCATTTGCTTGCTCAAACCTGAGCGACCATGGCTGCTTTTTGTGGCAACAGTATTTGGACTCCTCAAGCTCGAAATTGTTTTCAGCGGGGAATAACTTGTTCTAATTCGTTAAAGTTTTTACCTTTTCAATTTAGTTGTTGTAAGAGATTGTGGGGTAGGTCATTGAAGTGCAGGGTTTTGGGCGAAACGGACGATGTGGGATTTGAAGTGAGTAGTGCCATAAAAGACGACCTATTTGTTGGTTTTTTCAGAGAAGCATGGCCTTATTTTCTTGCACATCGAGGAAGCACGTTTGTTGTTTTAATCTCAGCTGAAATTGTTGATAGCCCTCATTTGGATCATCTTCTCATG : GATATCTCCCTTCTTCATGGTCTGGGAATCAAATTTGTTCTTGTGCCAGGAACTCATGTTCAGATTGACCGGCTTCTGACTGAAAGGG : GAAGTGAGGCCAAGTATGTAGGCCGCTACAGAATTACAGACCCTGATTCACTCGAGGCAGCTATGGATACATCCGGAAGAATTCGTCTTATGATAGAGGCAAAGTTGTCACCTGGCCCTTCATTGACTGGTGTCCGCCGACATGGAGATAATAGTCGCTGGCATGATAGTGTTGGTGTTGCCAGTGGTAATTTTCTATCAGCGAAG : AAAAGAGGAGTTGTCGAAGGAATTGATTATTCTTCAACTGGTGAAGTAAAGAAGATAGATGTTTCTCGAATTCGCGAGAGGCTTGATCAGGATTCCATAGTGCTATTGAGCAATCTTGGTTATTCCAGCTCTGGAGAAGTATTAAACTGCAA : CACATACGAAGTTGCAACAGCTTGTGCCTTAGCTCTAGGAGCAGAAAAACTAATTTGTATCATAGACGGCCCAATTCTTGATGAGTCGAGCCGTCTGATTCGTTTCTTAACTCTTCAAGATGCTGATATGCTGGTCCGCAGACGAGCTGAGCAAAGTGAGACTGCTGCTAATTATGTAAAAGCTGTTAGTCAGGAGGACTTCAATCGTTTAGGTTACCATGGTTCCAATGGATCGCTCCCTTCCCAAAATGGCGATGTTTATAGCCAAAGATATAATCCGACATTTCAGAATGGCATTGGTTTTGACAATGGAAATGGGCTTTGGTCTAGTGAACAAGGTTTTGCCATTGGAGGACAAGAGAAACTAAGCCGATCAAATGGTTATCTCTCAGAATTAGCTGCTGCTGCTTTTGTTTGCCGA : GGAGGTGTTCAAAGAGTGCACCTGCTGGATGGCACTATTGGTGGAGTTTTATTAAAGGAATTGTTCCAAAGAGATGGAGTTGGGACAATGGTTGCTAG : CGATCTTTATGAAGGAGCACGGATGGCCAGGGTGTCAGATGTTCCTGGAATAAAGCAGTTGTTACAACCTCTGGAAGAGTCTGGAACATTGATCAGAAGAACTGAGGAAGAG : CTGGTGAAAGCACTGCATTCATTCATTATTGTGGAGAGAGAGGGTCATATTATAGCATGTGCAGCTCTCTTTCCTTACTTTGAAGAAAAATGTGGGGAGGTTGCTGCTATTGCTGTTTCTCCGGATTGTCGTGGCCAAGGACAGGGAGACAAGTTACTCG : ATTACATTGAAAAGAAAGCATCTTCTCTTGGATTGCAAATGCTCTTCCTTCTAACAACTCGCACAGCTGATTG : GTTTGTGAGGCGTGGCTTTTCTGAATGTTCCATTGATCATATACCAGAGCAAAGAAGGAAAAAAATCAATCTCGCCCGTAGATCAAAGTATTACATGAAGAAGCTGCTACCCGATAAAAGTGGTATACGTATCGATTGCACCTTCGCGTAGGAATTGAAGGTTTTTCATCTGTCTGTGTACTAGCTCTGCAACAAGCTCGTATTTAGTCAACCAGAAAATCAACCAATTGTTCCTGACAACTCAAGTCATATATAGGGGGGAGATTAATCTTTGTTGTTATTGCCTGCTATTATCTTTTGCGGTAGGTTTGGAAGAGTATTTTGATCGACGATGTATGCTTATATCTACGTTAATTGATCTTCAAATAGCGGACACCCCTTTGTTATCTTTTCTTTGTGGGTTCTTGGTCAAAATGTTTCAAAAAAATAAGTTTTT</gDNA_template>
            <first_frame> V  *  C  F  R  R  L  D  R  V  *  Y  L  E  K  K  *  G  C  R  L  T  A  K  V  I  I  E  H  M  H  Q  S  N  I  Y  V  A  S  R  W  L  P  V  *  I  L  P  T  P  P  T  P  N  A  T  P  F  T  R  Q  L  P  *  P  A  A  V  K  K  P  T  T  V  S  E  F  G  V  H  L  L  A  Q  T  *  A  T  M  A  A  F  C  G  N  S  I  W  T  P  Q  A  R  N  C  F  Q  R  G  I  T  C  S  N  S  L  K  F  L  P  F  Q  F  S  C  C  K  R  L  W  G  R  S  L  K  C  R  V  L  G  E  T  D  D  V  G  F  E  V  S  S  A  I  K  D  D  L  F  V  G  F  F  R  E  A  W  P  Y  F  L  A  H  R  G  S  T  F  V  V  L  I  S  A  E  I  V  D  S  P  H  L  D  H  L  L  M  :  D  I  S  L  L  H  G  L  G  I  K  F  V  L  V  P  G  T  H  V  Q  I  D  R  L  L  T  E  R   : G  S  E  A  K  Y  V  G  R  Y  R  I  T  D  P  D  S  L  E  A  A  M  D  T  S  G  R  I  R  L  M  I  E  A  K  L  S  P  G  P  S  L  T  G  V  R  R  H  G  D  N  S  R  W  H  D  S  V  G  V  A  S  G  N  F  L  S  A  K  :  K  R  G  V  V  E  G  I  D  Y  S  S  T  G  E  V  K  K  I  D  V  S  R  I  R  E  R  L  D  Q  D  S  I  V  L  L  S  N  L  G  Y  S  S  S  G  E  V  L  N  C  N :   T  Y  E  V  A  T  A  C  A  L  A  L  G  A  E  K  L  I  C  I  I  D  G  P  I  L  D  E  S  S  R  L  I  R  F  L  T  L  Q  D  A  D  M  L  V  R  R  R  A  E  Q  S  E  T  A  A  N  Y  V  K  A  V  S  Q  E  D  F  N  R  L  G  Y  H  G  S  N  G  S  L  P  S  Q  N  G  D  V  Y  S  Q  R  Y  N  P  T  F  Q  N  G  I  G  F  D  N  G  N  G  L  W  S  S  E  Q  G  F  A  I  G  G  Q  E  K  L  S  R  S  N  G  Y  L  S  E  L  A  A  A  A  F  V  C  R  :  G  G  V  Q  R  V  H  L  L  D  G  T  I  G  G  V  L  L  K  E  L  F  Q  R  D  G  V  G  T  M  V  A  S :   D  L  Y  E  G  A  R  M  A  R  V  S  D  V  P  G  I  K  Q  L  L  Q  P  L  E  E  S  G  T  L  I  R  R  T  E  E  E  :  L  V  K  A  L  H  S  F  I  I  V  E  R  E  G  H  I  I  A  C  A  A  L  F  P  Y  F  E  E  K  C  G  E  V  A  A  I  A  V  S  P  D  C  R  G  Q  G  Q  G  D  K  L  L   : D  Y  I  E  K  K  A  S  S  L  G  L  Q  M  L  F  L  L  T  T  R  T  A  D  W :   F  V  R  R  G  F  S  E  C  S  I  D  H  I  P  E  Q  R  R  K  K  I  N  L  A  R  R  S  K  Y  Y  M  K  K  L  L  P  D  K  S  G  I  R  I  D  C  T  F  A  *  E  L  K  V  F  H  L  S  V  Y  *  L  C  N  K  L  V  F  S  Q  P  E  N  Q  P  I  V  P  D  N  S  S  H  I  *  G  G  D  *  S  L  L  L  L  P  A  I  I  F  C  G  R  F  G  R  V  F  *  S  T  M  Y  A  Y  I  Y  V  N  *  S  S  N  S  G  H  P  F  V  I  F  S  L  W  V  L  G  Q  N  V  S  K  K  *  V  F </first_frame>
            <second_frame>  F  D  V  L  E  G  *  I  E  Y  D  I  *  K  K  N  R  A  A  D  *  R  P  K  L  L  L  N  I  C  T  S  Q  T  Y  T  W  R  V  V  G  Y  R  Y  K  F  F  Q  L  H  L  P  P  T  P  P  H  S  P  G  S  C  H  S  P  L  P  S  K  S  P  L  Q  Y  R  S  S  A  C  I  C  L  L  K  P  E  R  P  W  L  L  F  V  A  T  V  F  G  L  L  K  L  E  I  V  F  S  G  E  *  L  V  L  I  R  *  S  F  Y  L  F  N  L  V  V  V  R  D  C  G  V  G  H  *  S  A  G  F  W  A  K  R  T  M  W  D  L  K  *  V  V  P  *  K  T  T  Y  L  L  V  F  S  E  K  H  G  L  I  F  L  H  I  E  E  A  R  L  L  F  *  S  Q  L  K  L  L  I  A  L  I  W  I  I  F  S  W :   I  S  P  F  F  M  V  W  E  S  N  L  F  L  C  Q  E  L  M  F  R  L  T  G  F  *  L  K  G  :  E  V  R  P  S  M  *  A  A  T  E  L  Q  T  L  I  H  S  R  Q  L  W  I  H  P  E  E  F  V  L  *  *  R  Q  S  C  H  L  A  L  H  *  L  V  S  A  D  M  E  I  I  V  A  G  M  I  V  L  V  L  P  V  V  I  F  Y  Q  R  R :   K  E  E  L  S  K  E  L  I  I  L  Q  L  V  K  *  R  R  *  M  F  L  E  F  A  R  G  L  I  R  I  P  *  C  Y  *  A  I  L  V  I  P  A  L  E  K  Y  *  T  A   : T  H  T  K  L  Q  Q  L  V  P  *  L  *  E  Q  K  N  *  F  V  S  *  T  A  Q  F  L  M  S  R  A  V  *  F  V  S  *  L  F  K  M  L  I  C  W  S  A  D  E  L  S  K  V  R  L  L  L  I  M  *  K  L  L  V  R  R  T  S  I  V  *  V  T  M  V  P  M  D  R  S  L  P  K  M  A  M  F  I  A  K  D  I  I  R  H  F  R  M  A  L  V  L  T  M  E  M  G  F  G  L  V  N  K  V  L  P  L  E  D  K  R  N  *  A  D  Q  M  V  I  S  Q  N  *  L  L  L  L  L  F  A  E :   E  V  F  K  E  C  T  C  W  M  A  L  L  V  E  F  Y  *  R  N  C  S  K  E  M  E  L  G  Q  W  L  L   : A  I  F  M  K  E  H  G  W  P  G  C  Q  M  F  L  E  *  S  S  C  Y  N  L  W  K  S  L  E  H  *  S  E  E  L  R  K  S :   W  *  K  H  C  I  H  S  L  L  W  R  E  R  V  I  L  *  H  V  Q  L  S  F  L  T  L  K  K  N  V  G  R  L  L  L  L  L  F  L  R  I  V  V  A  K  D  R  E  T  S  Y  S  :  I  T  L  K  R  K  H  L  L  L  D  C  K  C  S  S  F  *  Q  L  A  Q  L  I   : G  L  *  G  V  A  F  L  N  V  P  L  I  I  Y  Q  S  K  E  G  K  K  S  I  S  P  V  D  Q  S  I  T  *  R  S  C  Y  P  I  K  V  V  Y  V  S  I  A  P  S  R  R  N  *  R  F  F  I  C  L  C  T  S  S  A  T  S  S  Y  L  V  N  Q  K  I  N  Q  L  F  L  T  T  Q  V  I  Y  R  G  E  I  N  L  C  C  Y  C  L  L  L  S  F  A  V  G  L  E  E  Y  F  D  R  R  C  M  L  I  S  T  L  I  D  L  Q  I  A  D  T  P  L  L  S  F  L  C  G  F  L  V  K  M  F  Q  K  N  K  F   </second_frame>
            <third_frame>   L  M  F  *  K  A  R  *  S  M  I  F  R  K  K  I  G  L  P  T  D  G  Q  S  Y  Y  *  T  Y  A  P  V  K  H  I  R  G  E  S  L  V  T  G  I  N  S  S  N  S  T  Y  P  Q  R  H  P  I  H  Q  A  A  A  I  A  R  C  R  Q  K  A  H  Y  S  I  G  V  R  R  A  F  A  C  S  N  L  S  D  H  G  C  F  L  W  Q  Q  Y  L  D  S  S  S  S  K  L  F  S  A  G  N  N  L  F  *  F  V  K  V  F  T  F  S  I  *  L  L  *  E  I  V  G  *  V  I  E  V  Q  G  F  G  R  N  G  R  C  G  I  *  S  E  *  C  H  K  R  R  P  I  C  W  F  F  Q  R  S  M  A  L  F  S  C  T  S  R  K  H  V  C  C  F  N  L  S  *  N  C  *  *  P  S  F  G  S  S  S  H   : G  Y  L  P  S  S  W  S  G  N  Q  I  C  S  C  A  R  N  S  C  S  D  *  P  A  S  D  *  K  G :   K  *  G  Q  V  C  R  P  L  Q  N  Y  R  P  *  F  T  R  G  S  Y  G  Y  I  R  K  N  S  S  Y  D  R  G  K  V  V  T  W  P  F  I  D  W  C  P  P  T  W  R  *  *  S  L  A  *  *  C  W  C  C  Q  W  *  F  S  I  S  E   : E  K  R  S  C  R  R  N  *  L  F  F  N  W  *  S  K  E  D  R  C  F  S  N  S  R  E  A  *  S  G  F  H  S  A  I  E  Q  S  W  L  F  Q  L  W  R  S  I  K  L  Q  :  H  I  R  S  C  N  S  L  C  L  S  S  R  S  R  K  T  N  L  Y  H  R  R  P  N  S  *  *  V  E  P  S  D  S  F  L  N  S  S  R  C  *  Y  A  G  P  Q  T  S  *  A  K  *  D  C  C  *  L  C  K  S  C  *  S  G  G  L  Q  S  F  R  L  P  W  F  Q  W  I  A  P  F  P  K  W  R  C  L  *  P  K  I  *  S  D  I  S  E  W  H  W  F  *  Q  W  K  W  A  L  V  *  *  T  R  F  C  H  W  R  T  R  E  T  K  P  I  K  W  L  S  L  R  I  S  C  C  C  F  C  L  P   : R  R  C  S  K  S  A  P  A  G  W  H  Y  W  W  S  F  I  K  G  I  V  P  K  R  W  S  W  D  N  G  C  *  :  R  S  L  *  R  S  T  D  G  Q  G  V  R  C  S  W  N  K  A  V  V  T  T  S  G  R  V  W  N  I  D  Q  K  N  *  G  R   : A  G  E  S  T  A  F  I  H  Y  C  G  E  R  G  S  Y  Y  S  M  C  S  S  L  S  L  L  *  R  K  M  W  G  G  C  C  Y  C  C  F  S  G  L  S  W  P  R  T  G  R  Q  V  T  R :   L  H  *  K  E  S  I  F  S  W  I  A  N  A  L  P  S  N  N  S  H  S  *  L  :  V  C  E  A  W  L  F  *  M  F  H  *  S  Y  T  R  A  K  K  E  K  N  Q  S  R  P  *  I  K  V  L  H  E  E  A  A  T  R  *  K  W  Y  T  Y  R  L  H  L  R  V  G  I  E  G  F  S  S  V  C  V  L  A  L  Q  Q  A  R  I  *  S  T  R  K  S  T  N  C  S  *  Q  L  K  S  Y  I  G  G  R  L  I  F  V  V  I  A  C  Y  Y  L  L  R  *  V  W  K  S  I  L  I  D  D  V  C  L  Y  L  R  *  L  I  F  K  *  R  T  P  L  C  Y  L  F  F  V  G  S  W  S  K  C  F  K  K  I  S  F  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0030E13.1" strand="-"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="49588" stop="49259"/>
                    <exon start="49154" stop="49067"/>
                    <exon start="48519" stop="48314"/>
                    <exon start="48144" stop="47993"/>
                    <exon start="47152" stop="46732"/>
                    <exon start="46223" stop="46126"/>
                    <exon start="45564" stop="45453"/>
                    <exon start="45343" stop="45184"/>
                    <exon start="44749" stop="44677"/>
                    <exon start="43524" stop="43374"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1788</number_coding_nucleotides>
                  <number_encoded_amino_acids>596</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ATMAAFCGNSIWTPQARNCFQRGITCSNSLKFLPFQFSCCKRLWGRSLKCRVLGETDDVGFEVSSAIKDDLFVGFFREAWPYFLAHRGSTFVVLISAEIVDSPHLDHLLMDISLLHGLGIKFVLVPGTHVQIDRLLTERGSEAKYVGRYRITDPDSLEAAMDTSGRIRLMIEAKLSPGPSLTGVRRHGDNSRWHDSVGVASGNFLSAKKRGVVEGIDYSSTGEVKKIDVSRIRERLDQDSIVLLSNLGYSSSGEVLNCNTYEVATACALALGAEKLICIIDGPILDESSRLIRFLTLQDADMLVRRRAEQSETAANYVKAVSQEDFNRLGYHGSNGSLPSQNGDVYSQRYNPTFQNGIGFDNGNGLWSSEQGFAIGGQEKLSRSNGYLSELAAAAFVCRGGVQRVHLLDGTIGGVLLKELFQRDGVGTMVASDLYEGARMARVSDVPGIKQLLQPLEESGTLIRRTEEELVKALHSFIIVEREGHIIACAALFPYFEEKCGEVAAIAVSPDCRGQGQGDKLLDYIEKKASSLGLQMLFLLTTRTADWFVRRGFSECSIDHIPEQRRKKINLARRSKYYMKKLLPDKSGIRIDCTFA*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0030E13.1" strand="-"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="43366" stop="43091"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>276</number_coding_nucleotides>
                  <number_encoded_amino_acids>92</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RFFICLCTSSATSSYLVNQKINQLFLTTQVIYRGEINLCCYCLLLSFAVGLEEYFDRRCMLISTLIDLQIADTPLLSFLCGFLVKMFQKNKF</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="+" PGL_start="51490" PGL_stop="52927"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="51490" e_stop="52391"/>
            <exon e_start="52730" e_stop="52787"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.991" acc_prob="0.981" e_score="0.998"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="51490" e_stop="52391" e_length="902"/>
          </exon>
          <intron i_serial="1" don_prob="0.991" acc_prob="0.981">
            <gDNA_intron_boundary i_start="52392" i_stop="52729" i_length="338"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="52730" e_stop="52787" e_length="58"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="51490" stop="52391"/>
              <exon start="52730" stop="52787"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U586039" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTGTGGTAATGGAGATTCAACACTCCAATTTTGCTATGCTTATTGCCTTCCTTCTCTTTGTAGCCATAGCTCTGAAGCTATGGAAAAAATCCAAAATTCAGTATAAACTCCCTCCAGGTCCTAGAAAACTACCATTTATTGGGAATTTGCATCAATTATCTAGCTCATTGCCTCACCATACTTTTAAGAATTTGTCAAACAAATATGGTCCCATGATGCACCTACAACTTGGTGAAGTTTCAGCTGTTATAGTATCATCACCACAAGTGGCAAAAGAGGTACTGAAGACTCATGACTTAATCTTTGCTAATAGGCCACAACTTCTTTCTGTACAGATTCTAAGCAACAACAGTCCTACCCTTTCATTCTCTCCTTATGGGGCTAATTGGAGACAGCTTAGAAAAGTATGTGTCTTGGAGCTTTTAAGTGCAAAGCGGGTTCAATCATTTGAGTCAATAAGGGAAGAGGAAGTTGATAATCTTATTGAAGCAATTTCATTGATACAGCCACAAGTTCCTATTGATATTAGTGAAATGATATTCTCGATGACGAATAACATAACTGCCAGGGCAGCCTTTGGTAAGAAATGCAAACACAAAGATGAGTTTATTAAAGCTATGAAAACAATTACAGAGCTATCAGGAGGTTTTGATATACCAGATTTATTTCCTTCCTTGAAAATTTTCCACTCATTAAGTGGAGTGAAGCCTGCACTCGAGAAAGTACATCAAAAGGTTGATAAAATCTTTGAGGATATAATACAAGAGCATAAGGAAAACAAGAGAGATATGAGCAGTAACATGCTGTATAAGGAAGATTTGGTTGATGTTCTACTTAGGGTTCAAGAAAGTGGTGATTTAGAAATCCCCATATCAAGAAACACTCTCAAATCTGTCATTTTG : GAAATGTTCATAGGGGGAACAGACACATCATCGACAGTTTTAGAGTGGGCTATTTCTG</gDNA_template>
            <first_frame> L  W  *  W  R  F  N  T  P  I  L  L  C  L  L  P  S  F  S  L  *  P  *  L  *  S  Y  G  K  N  P  K  F  S  I  N  S  L  Q  V  L  E  N  Y  H  L  L  G  I  C  I  N  Y  L  A  H  C  L  T  I  L  L  R  I  C  Q  T  N  M  V  P  *  C  T  Y  N  L  V  K  F  Q  L  L  *  Y  H  H  H  K  W  Q  K  R  Y  *  R  L  M  T  *  S  L  L  I  G  H  N  F  F  L  Y  R  F  *  A  T  T  V  L  P  F  H  S  L  L  M  G  L  I  G  D  S  L  E  K  Y  V  S  W  S  F  *  V  Q  S  G  F  N  H  L  S  Q  *  G  K  R  K  L  I  I  L  L  K  Q  F  H  *  Y  S  H  K  F  L  L  I  L  V  K  *  Y  S  R  *  R  I  T  *  L  P  G  Q  P  L  V  R  N  A  N  T  K  M  S  L  L  K  L  *  K  Q  L  Q  S  Y  Q  E  V  L  I  Y  Q  I  Y  F  L  P  *  K  F  S  T  H  *  V  E  *  S  L  H  S  R  K  Y  I  K  R  L  I  K  S  L  R  I  *  Y  K  S  I  R  K  T  R  E  I  *  A  V  T  C  C  I  R  K  I  W  L  M  F  Y  L  G  F  K  K  V  V  I  *  K  S  P  Y  Q  E  T  L  S  N  L  S  F  W :   K  C  S  *  G  E  Q  T  H  H  R  Q  F  *  S  G  L  F  L </first_frame>
            <second_frame>  C  G  N  G  D  S  T  L  Q  F  C  Y  A  Y  C  L  P  S  L  C  S  H  S  S  E  A  M  E  K  I  Q  N  S  V  *  T  P  S  R  S  *  K  T  T  I  Y  W  E  F  A  S  I  I  *  L  I  A  S  P  Y  F  *  E  F  V  K  Q  I  W  S  H  D  A  P  T  T  W  *  S  F  S  C  Y  S  I  I  T  T  S  G  K  R  G  T  E  D  S  *  L  N  L  C  *  *  A  T  T  S  F  C  T  D  S  K  Q  Q  Q  S  Y  P  F  I  L  S  L  W  G  *  L  E  T  A  *  K  S  M  C  L  G  A  F  K  C  K  A  G  S  I  I  *  V  N  K  G  R  G  S  *  *  S  Y  *  S  N  F  I  D  T  A  T  S  S  Y  *  Y  *  *  N  D  I  L  D  D  E  *  H  N  C  Q  G  S  L  W  *  E  M  Q  T  Q  R  *  V  Y  *  S  Y  E  N  N  Y  R  A  I  R  R  F  *  Y  T  R  F  I  S  F  L  E  N  F  P  L  I  K  W  S  E  A  C  T  R  E  S  T  S  K  G  *  *  N  L  *  G  Y  N  T  R  A  *  G  K  Q  E  R  Y  E  Q  *  H  A  V  *  G  R  F  G  *  C  S  T  *  G  S  R  K  W  *  F  R  N  P  H  I  K  K  H  S  Q  I  C  H  F   : G  N  V  H  R  G  N  R  H  I  I  D  S  F  R  V  G  Y  F   </second_frame>
            <third_frame>   V  V  M  E  I  Q  H  S  N  F  A  M  L  I  A  F  L  L  F  V  A  I  A  L  K  L  W  K  K  S  K  I  Q  Y  K  L  P  P  G  P  R  K  L  P  F  I  G  N  L  H  Q  L  S  S  S  L  P  H  H  T  F  K  N  L  S  N  K  Y  G  P  M  M  H  L  Q  L  G  E  V  S  A  V  I  V  S  S  P  Q  V  A  K  E  V  L  K  T  H  D  L  I  F  A  N  R  P  Q  L  L  S  V  Q  I  L  S  N  N  S  P  T  L  S  F  S  P  Y  G  A  N  W  R  Q  L  R  K  V  C  V  L  E  L  L  S  A  K  R  V  Q  S  F  E  S  I  R  E  E  E  V  D  N  L  I  E  A  I  S  L  I  Q  P  Q  V  P  I  D  I  S  E  M  I  F  S  M  T  N  N  I  T  A  R  A  A  F  G  K  K  C  K  H  K  D  E  F  I  K  A  M  K  T  I  T  E  L  S  G  G  F  D  I  P  D  L  F  P  S  L  K  I  F  H  S  L  S  G  V  K  P  A  L  E  K  V  H  Q  K  V  D  K  I  F  E  D  I  I  Q  E  H  K  E  N  K  R  D  M  S  S  N  M  L  Y  K  E  D  L  V  D  V  L  L  R  V  Q  E  S  G  D  L  E  I  P  I  S  R  N  T  L  K  S  V  I  L  :  E  M  F  I  G  G  T  D  T  S  S  T  V  L  E  W  A  I  S  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0030E13.1" strand="+"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="51492" stop="52391"/>
                    <exon start="52730" stop="52786"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>957</number_coding_nucleotides>
                  <number_encoded_amino_acids>319</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VVMEIQHSNFAMLIAFLLFVAIALKLWKKSKIQYKLPPGPRKLPFIGNLHQLSSSLPHHTFKNLSNKYGPMMHLQLGEVSAVIVSSPQVAKEVLKTHDLIFANRPQLLSVQILSNNSPTLSFSPYGANWRQLRKVCVLELLSAKRVQSFESIREEEVDNLIEAISLIQPQVPIDISEMIFSMTNNITARAAFGKKCKHKDEFIKAMKTITELSGGFDIPDLFPSLKIFHSLSGVKPALEKVHQKVDKIFEDIIQEHKENKRDMSSNMLYKEDLVDVLLRVQESGDLEIPISRNTLKSVILEMFIGGTDTSSTVLEWAIS</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="52383" e_stop="52927"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="52383" e_stop="52927" e_length="545"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52383" stop="52927"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U587670" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTCATTTTGGTATGTTCTTTCAACCTTATAAAATCCCCTTTTCTAAAACAAGCCGTGTTTTAGTTGTTTGCAAGTAACACTTTTTGGAACATCATATTATGTTTGTGTCAACTCAATCACACAGAAAAATATCTGCTAACTAGAAGGAAATTATACATGAGGACTTTACTATAAAATTGAATGCTTGATATGTCAAAATTATTATATTGATGTATCTATATGTTGCCTACTTATCATGGAGCATAGAGAAGATGTTTTTATCATATTGCCTAATACTACTGAGTGACTAACTTTATCAGCTCAATTCTTGTGAACTAAAAGTTTGTCATATGGCTGTACACATTCAGGAAATGTTCATAGGGGGAACAGACACATCATCGACAGTTTTAGAGTGGGCTATTTCTGAAATGATGAAGAATCCACAAGTGATGGAAAAAGCACAAGCTGAGGTGAGAGAGGTTTTCAAAGGGAAAAGTAAAATTACAGAATCGGAAATTCAAAAGTTAGATTATATAAAAATGGTTATCAAAGAGACACTACGAATG</gDNA_template>
            <first_frame> V  I  L  V  C  S  F  N  L  I  K  S  P  F  L  K  Q  A  V  F  *  L  F  A  S  N  T  F  W  N  I  I  L  C  L  C  Q  L  N  H  T  E  K  Y  L  L  T  R  R  K  L  Y  M  R  T  L  L  *  N  *  M  L  D  M  S  K  L  L  Y  *  C  I  Y  M  L  P  T  Y  H  G  A  *  R  R  C  F  Y  H  I  A  *  Y  Y  *  V  T  N  F  I  S  S  I  L  V  N  *  K  F  V  I  W  L  Y  T  F  R  K  C  S  *  G  E  Q  T  H  H  R  Q  F  *  S  G  L  F  L  K  *  *  R  I  H  K  *  W  K  K  H  K  L  R  *  E  R  F  S  K  G  K  V  K  L  Q  N  R  K  F  K  S  *  I  I  *  K  W  L  S  K  R  H  Y  E   </first_frame>
            <second_frame>  S  F  W  Y  V  L  S  T  L  *  N  P  L  F  *  N  K  P  C  F  S  C  L  Q  V  T  L  F  G  T  S  Y  Y  V  C  V  N  S  I  T  Q  K  N  I  C  *  L  E  G  N  Y  T  *  G  L  Y  Y  K  I  E  C  L  I  C  Q  N  Y  Y  I  D  V  S  I  C  C  L  L  I  M  E  H  R  E  D  V  F  I  I  L  P  N  T  T  E  *  L  T  L  S  A  Q  F  L  *  T  K  S  L  S  Y  G  C  T  H  S  G  N  V  H  R  G  N  R  H  I  I  D  S  F  R  V  G  Y  F  *  N  D  E  E  S  T  S  D  G  K  S  T  S  *  G  E  R  G  F  Q  R  E  K  *  N  Y  R  I  G  N  S  K  V  R  L  Y  K  N  G  Y  Q  R  D  T  T  N  </second_frame>
            <third_frame>   H  F  G  M  F  F  Q  P  Y  K  I  P  F  S  K  T  S  R  V  L  V  V  C  K  *  H  F  L  E  H  H  I  M  F  V  S  T  Q  S  H  R  K  I  S  A  N  *  K  E  I  I  H  E  D  F  T  I  K  L  N  A  *  Y  V  K  I  I  I  L  M  Y  L  Y  V  A  Y  L  S  W  S  I  E  K  M  F  L  S  Y  C  L  I  L  L  S  D  *  L  Y  Q  L  N  S  C  E  L  K  V  C  H  M  A  V  H  I  Q  E  M  F  I  G  G  T  D  T  S  S  T  V  L  E  W  A  I  S  E  M  M  K  N  P  Q  V  M  E  K  A  Q  A  E  V  R  E  V  F  K  G  K  S  K  I  T  E  S  E  I  Q  K  L  D  Y  I  K  M  V  I  K  E  T  L  R  M </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0030E13.1" strand="+"/>
                <serials PGL_serial="7" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="52673" stop="52927"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>255</number_coding_nucleotides>
                  <number_encoded_amino_acids>85</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LYQLNSCELKVCHMAVHIQEMFIGGTDTSSTVLEWAISEMMKNPQVMEKAQAEVREVFKGKSKITESEIQKLDYIKMVIKETLRM</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="+" PGL_start="52966" PGL_stop="53522"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="52966" e_stop="53522"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.995"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.995">
            <gDNA_exon_boundary e_start="52966" e_stop="53522" e_length="557"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52966" stop="53522"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U600012" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGAAAAATGTGAAATTGGTGGCTATGACATACCTGCAAAAACCAAAGTCATCATCAATGCATGGGCAATAGGTAGACATCCACAACACTGGGAAAATGCTGAATGCTTTGAACCAGAAAGATTCCAAGATTTAGACTTGGATTTCGTAGGGACTAATCTTGAGTACATACCATTTGGAGGTGGCAGAAGGATGTGTCCAGGGTCATTATTTGGAATTGCAAATGTTGAACTTCCACTTGCCAAATTACTATTTCATTTCGACTGGGAACTCCCTGATGGAATTGAAGCAAGTGACCTTGACATGACAGAGACTTTTGGTGCAACCGTTGGAAGGAAGAATGATTTGTACTTGGTTGCAAAACCTCATATTTCCAAATCCTAATGCACATGAAATAAGGTTTCTTCTATTCTTTTTTCTCTGTTATTCACTTTAGCAAAATGAAAGCAGCCCACCCAAGTGTCCACATTTCTTAATATGCCCAAACAGAAGAAAAATCTCTTGTCTAGTCTCTGCCTACTGTATGTGCTAAATCAAACTATAATAAGTTGTCTACAGG</gDNA_template>
            <first_frame> R  K  M  *  N  W  W  L  *  H  T  C  K  N  Q  S  H  H  Q  C  M  G  N  R  *  T  S  T  T  L  G  K  C  *  M  L  *  T  R  K  I  P  R  F  R  L  G  F  R  R  D  *  S  *  V  H  T  I  W  R  W  Q  K  D  V  S  R  V  I  I  W  N  C  K  C  *  T  S  T  C  Q  I  T  I  S  F  R  L  G  T  P  *  W  N  *  S  K  *  P  *  H  D  R  D  F  W  C  N  R  W  K  E  E  *  F  V  L  G  C  K  T  S  Y  F  Q  I  L  M  H  M  K  *  G  F  F  Y  S  F  F  S  V  I  H  F  S  K  M  K  A  A  H  P  S  V  H  I  S  *  Y  A  Q  T  E  E  K  S  L  V  *  S  L  P  T  V  C  A  K  S  N  Y  N  K  L  S  T   </first_frame>
            <second_frame>  E  K  C  E  I  G  G  Y  D  I  P  A  K  T  K  V  I  I  N  A  W  A  I  G  R  H  P  Q  H  W  E  N  A  E  C  F  E  P  E  R  F  Q  D  L  D  L  D  F  V  G  T  N  L  E  Y  I  P  F  G  G  G  R  R  M  C  P  G  S  L  F  G  I  A  N  V  E  L  P  L  A  K  L  L  F  H  F  D  W  E  L  P  D  G  I  E  A  S  D  L  D  M  T  E  T  F  G  A  T  V  G  R  K  N  D  L  Y  L  V  A  K  P  H  I  S  K  S  *  C  T  *  N  K  V  S  S  I  L  F  S  L  L  F  T  L  A  K  *  K  Q  P  T  Q  V  S  T  F  L  N  M  P  K  Q  K  K  N  L  L  S  S  L  C  L  L  Y  V  L  N  Q  T  I  I  S  C  L  Q  </second_frame>
            <third_frame>   K  N  V  K  L  V  A  M  T  Y  L  Q  K  P  K  S  S  S  M  H  G  Q  *  V  D  I  H  N  T  G  K  M  L  N  A  L  N  Q  K  D  S  K  I  *  T  W  I  S  *  G  L  I  L  S  T  Y  H  L  E  V  A  E  G  C  V  Q  G  H  Y  L  E  L  Q  M  L  N  F  H  L  P  N  Y  Y  F  I  S  T  G  N  S  L  M  E  L  K  Q  V  T  L  T  *  Q  R  L  L  V  Q  P  L  E  G  R  M  I  C  T  W  L  Q  N  L  I  F  P  N  P  N  A  H  E  I  R  F  L  L  F  F  F  L  C  Y  S  L  *  Q  N  E  S  S  P  P  K  C  P  H  F  L  I  C  P  N  R  R  K  I  S  C  L  V  S  A  Y  C  M  C  *  I  K  L  *  *  V  V  Y  R </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0030E13.1" strand="+"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="52967" stop="53347"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>378</number_coding_nucleotides>
                  <number_encoded_amino_acids>126</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EKCEIGGYDIPAKTKVIINAWAIGRHPQHWENAECFEPERFQDLDLDFVGTNLEYIPFGGGRRMCPGSLFGIANVELPLAKLLFHFDWELPDGIEASDLDMTETFGATVGRKNDLYLVAKPHISKS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="-" PGL_start="58036" PGL_stop="54932"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="58036" e_stop="57829"/>
            <exon e_start="57680" e_stop="57381"/>
            <exon e_start="57305" e_stop="57154"/>
            <exon e_start="55250" e_stop="54932"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.590" acc_prob="0.731" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.987" e_score="1.000"/>
          <exon-only e_score="0.991"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="58036" e_stop="57829" e_length="208"/>
          </exon>
          <intron i_serial="1" don_prob="0.590" acc_prob="0.731">
            <gDNA_intron_boundary i_start="57828" i_stop="57681" i_length="148"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="57680" e_stop="57381" e_length="300"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="0.998">
            <gDNA_intron_boundary i_start="57380" i_stop="57306" i_length="75"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="57305" e_stop="57154" e_length="152"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="0.987">
            <gDNA_intron_boundary i_start="57153" i_stop="55251" i_length="1903"/>
          </intron>
          <exon e_serial="4" e_score="0.991">
            <gDNA_exon_boundary e_start="55250" e_stop="54932" e_length="319"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58036" stop="57829"/>
              <exon start="57680" stop="57381"/>
              <exon start="57305" stop="57154"/>
              <exon start="55250" stop="54932"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U572746" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ACACGCTCCCTTTAGTTTCATTTACCACCAAATTTACTTCATTTTCTGCCACGCTTCCTTACATCATTATTTTCCCCCTGTTACTACTTCTTCTTCTTCCTTCTCTTTAGCTCATATAAACTCCAAAAAATTTACACAACTGAAAACCGTGCGTAGTTTTTCTTCCTTTATTGGTGATTGAATTTTTTGTGTGGATTCTTCTGCATCG : TTTGCGCTCTGCATTATTAATCGATCGACCGGCCGGTGTTTGAGTTTAAGATGGGGAATTGCCAAGCGGCAGAGGCAGCAACTGTAGTGATTCAACATCCAGGCAATAAAATTGAGAGGATTTACTGGTCTATAAGTGCACATGAAGTCATGAGTTCGAATCCTGGCCACTACGTCGCCCTTGTTATCACTTCTCCAACGGGGAGAACACACAACGGTTCGCCCGTCAGGCAGCTTAAGCTTCTCCGCCCCGGAGATACTTTGCTTCTTGGACAAGTTTATCGACTCATCTGCTTCGAAG : ATGTACTAAAAGAGTTTGCTGCAAAGAAGTGCGTGAAACTTGGCAAGTTGCTCAGGGAAAGTGGAGGCCTTGTTCTCGATTCAAAGAAAATCTCCGTCGATTCTTCAGCAGTGAAAAACAAGCCCAAAATGGTGAATGGAATCCCAGCTAAG : ATGGAACATGAAACTTATCAAAATGGAAGCAGTAGCAGCAGTGGGCAAAGAAGTGTGGGAAGGCATCATGGTGGTGTGGGGCAATGGAAACCAGCCTTACAGAGTATTGCAGAGATTGGAACTTGAACTATACCCACCATTAAGCATTACACTTTCCCTACCATGGCTAAACCTTTTCCAAAATAAGAAAGGATAGCAACTCAATTGTCCCTAGCTAATAGTAATTAGTTTAGAAAAGTACCACTTAATTACTACAATGTTTGACGAATTCCCTCTGAAGAATGCATCTACTTAGTAGCTGCTTATTTTCAAGTTCCAC</gDNA_template>
            <first_frame> T  R  S  L  *  F  H  L  P  P  N  L  L  H  F  L  P  R  F  L  T  S  L  F  S  P  C  Y  Y  F  F  F  F  L  L  F  S  S  Y  K  L  Q  K  I  Y  T  T  E  N  R  A  *  F  F  F  L  Y  W  *  L  N  F  L  C  G  F  F  C  I   : V  C  A  L  H  Y  *  S  I  D  R  P  V  F  E  F  K  M  G  N  C  Q  A  A  E  A  A  T  V  V  I  Q  H  P  G  N  K  I  E  R  I  Y  W  S  I  S  A  H  E  V  M  S  S  N  P  G  H  Y  V  A  L  V  I  T  S  P  T  G  R  T  H  N  G  S  P  V  R  Q  L  K  L  L  R  P  G  D  T  L  L  L  G  Q  V  Y  R  L  I  C  F  E   : D  V  L  K  E  F  A  A  K  K  C  V  K  L  G  K  L  L  R  E  S  G  G  L  V  L  D  S  K  K  I  S  V  D  S  S  A  V  K  N  K  P  K  M  V  N  G  I  P  A  K  :  M  E  H  E  T  Y  Q  N  G  S  S  S  S  S  G  Q  R  S  V  G  R  H  H  G  G  V  G  Q  W  K  P  A  L  Q  S  I  A  E  I  G  T  *  T  I  P  T  I  K  H  Y  T  F  P  T  M  A  K  P  F  P  K  *  E  R  I  A  T  Q  L  S  L  A  N  S  N  *  F  R  K  V  P  L  N  Y  Y  N  V  *  R  I  P  S  E  E  C  I  Y  L  V  A  A  Y  F  Q  V  P  </first_frame>
            <second_frame>  H  A  P  F  S  F  I  Y  H  Q  I  Y  F  I  F  C  H  A  S  L  H  H  Y  F  P  P  V  T  T  S  S  S  S  F  S  L  A  H  I  N  S  K  K  F  T  Q  L  K  T  V  R  S  F  S  S  F  I  G  D  *  I  F  C  V  D  S  S  A  S  :  F  A  L  C  I  I  N  R  S  T  G  R  C  L  S  L  R  W  G  I  A  K  R  Q  R  Q  Q  L  *  *  F  N  I  Q  A  I  K  L  R  G  F  T  G  L  *  V  H  M  K  S  *  V  R  I  L  A  T  T  S  P  L  L  S  L  L  Q  R  G  E  H  T  T  V  R  P  S  G  S  L  S  F  S  A  P  E  I  L  C  F  L  D  K  F  I  D  S  S  A  S  K  :  M  Y  *  K  S  L  L  Q  R  S  A  *  N  L  A  S  C  S  G  K  V  E  A  L  F  S  I  Q  R  K  S  P  S  I  L  Q  Q  *  K  T  S  P  K  W  *  M  E  S  Q  L  R :   W  N  M  K  L  I  K  M  E  A  V  A  A  V  G  K  E  V  W  E  G  I  M  V  V  W  G  N  G  N  Q  P  Y  R  V  L  Q  R  L  E  L  E  L  Y  P  P  L  S  I  T  L  S  L  P  W  L  N  L  F  Q  N  K  K  G  *  Q  L  N  C  P  *  L  I  V  I  S  L  E  K  Y  H  L  I  T  T  M  F  D  E  F  P  L  K  N  A  S  T  *  *  L  L  I  F  K  F  H </second_frame>
            <third_frame>   T  L  P  L  V  S  F  T  T  K  F  T  S  F  S  A  T  L  P  Y  I  I  I  F  P  L  L  L  L  L  L  L  P  S  L  *  L  I  *  T  P  K  N  L  H  N  *  K  P  C  V  V  F  L  P  L  L  V  I  E  F  F  V  W  I  L  L  H  R :   L  R  S  A  L  L  I  D  R  P  A  G  V  *  V  *  D  G  E  L  P  S  G  R  G  S  N  C  S  D  S  T  S  R  Q  *  N  *  E  D  L  L  V  Y  K  C  T  *  S  H  E  F  E  S  W  P  L  R  R  P  C  Y  H  F  S  N  G  E  N  T  Q  R  F  A  R  Q  A  A  *  A  S  P  P  R  R  Y  F  A  S  W  T  S  L  S  T  H  L  L  R  R :   C  T  K  R  V  C  C  K  E  V  R  E  T  W  Q  V  A  Q  G  K  W  R  P  C  S  R  F  K  E  N  L  R  R  F  F  S  S  E  K  Q  A  Q  N  G  E  W  N  P  S  *   : D  G  T  *  N  L  S  K  W  K  Q  *  Q  Q  W  A  K  K  C  G  K  A  S  W  W  C  G  A  M  E  T  S  L  T  E  Y  C  R  D  W  N  L  N  Y  T  H  H  *  A  L  H  F  P  Y  H  G  *  T  F  S  K  I  R  K  D  S  N  S  I  V  P  S  *  *  *  L  V  *  K  S  T  T  *  L  L  Q  C  L  T  N  S  L  *  R  M  H  L  L  S  S  C  L  F  S  S  S   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0030E13.1" strand="-"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="57660" stop="57381"/>
                    <exon start="57305" stop="57154"/>
                    <exon start="55250" stop="55125"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>555</number_coding_nucleotides>
                  <number_encoded_amino_acids>185</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SIDRPVFEFKMGNCQAAEAATVVIQHPGNKIERIYWSISAHEVMSSNPGHYVALVITSPTGRTHNGSPVRQLKLLRPGDTLLLGQVYRLICFEDVLKEFAAKKCVKLGKLLRESGGLVLDSKKISVDSSAVKNKPKMVNGIPAKMEHETYQNGSSSSSGQRSVGRHHGGVGQWKPALQSIAEIGT*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="+" PGL_start="65329" PGL_stop="68053"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="65329" e_stop="65844"/>
            <exon e_start="66554" e_stop="66851"/>
            <exon e_start="67674" e_stop="68053"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.774" e_score="1.000"/>
          <exon-intron don_prob="0.981" acc_prob="0.993" e_score="1.000"/>
          <exon-only e_score="0.982"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="65329" e_stop="65844" e_length="516"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.774">
            <gDNA_intron_boundary i_start="65845" i_stop="66553" i_length="709"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="66554" e_stop="66851" e_length="298"/>
          </exon>
          <intron i_serial="2" don_prob="0.981" acc_prob="0.993">
            <gDNA_intron_boundary i_start="66852" i_stop="67673" i_length="822"/>
          </intron>
          <exon e_serial="3" e_score="0.982">
            <gDNA_exon_boundary e_start="67674" e_stop="68053" e_length="380"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="65329" stop="65844"/>
              <exon start="66554" stop="66851"/>
              <exon start="67674" stop="68053"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U566217" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATAAATTTGGTTTCACAAGAGCTTTTTTTTTCCTCTTCTTCTTGTTCATGCCAAGAATCGCATCCCCTAATTTCGTCCAAAGATTAAGGGTTAGGGTTCTACGATCAAGAAACACGTTATCATCTCTGTTGGGTTCTTGAATTGTATGTTGTATTAGCAACTTCTCTACGCAATTCTCATTTTGTTATTGTTAGGACTCGGATCTGTTTGTTTGTTTAGCTTAATCAGGATTTTTGTATTGACAGATAAGAAATTGAATGTGAAGATGGGTAAGGGCAAAGAGAAATTGACTGGTAATGGGTCAAGGGAGGATAATGAATTATTGTCTCCTTCCAAGGAAGGGAAAGGAAAGAGATTATGGAAGAAAGTGAAGTACCAGCTTGTGGAGTATCATTCATTGCCTGGGTATTTGAAAGACAACGAATACATTCTGGGTCATTACCGGGCCGAATGGCCATTGAAGCAAGCATTGCTCAGCATCTTCACAATTCACAATGAGACCCTCAATGTTTGGAC : GCATTTGATAGGGTTCTTCCTCTTCCTTGCGCTCACAATTTATACTGCAACCAAAGTTCCCAAGGTTGTAGATCTACATTCCTTACAGAATCTGCCTGATGTGCTAAGGAAGGCTGATTTGCACAAATTACAAGCAGAACTTTTAACTTGTCTTCCTTCTTTGCCGTATATGCCTGATTTGCACAAACTTCGAGATGGTTTGCTACGTTCACCCTCTAATTGGCATATTATTGACCTCCTGCACAACTGTCTGCCTGAGCGATTTTCCCACAGCAACCATACAGATGTTTGTGTACTG : CGGAGTGTAAAAGAAGATGTGGCAAATATATTAGCACCATTGCTGGTGAGACCAATAACTCGCTGGCCATTCTATGCCTTCCTTGGTGGGGCAATGTTTTGTTTGTTAGCAAGCAGCACATGTCATTTACTTTCTTGCCATTCAGAGCGTTTATCATACATCATGTTGAGGCTCGACTATGCTGGTATCGCTGCCCTGATATCAACTTCATTTTACCCTCCGGTCTATTATTCCTTCATGTGTTACCCCTTCTTTTGCAATCTGTACCTGGGATTTATTACCCTCCTGGGAATTGGCACAATCTTGGGTTCCCTACTTCCTGTGTTCCAGACTCCCGAATATCGAGTTATTCGAGCATCTCTATTCTTTGGAATGGGCCT</gDNA_template>
            <first_frame> I  N  L  V  S  Q  E  L  F  F  S  S  S  S  C  S  C  Q  E  S  H  P  L  I  S  S  K  D  *  G  L  G  F  Y  D  Q  E  T  R  Y  H  L  C  W  V  L  E  L  Y  V  V  L  A  T  S  L  R  N  S  H  F  V  I  V  R  T  R  I  C  L  F  V  *  L  N  Q  D  F  C  I  D  R  *  E  I  E  C  E  D  G  *  G  Q  R  E  I  D  W  *  W  V  K  G  G  *  *  I  I  V  S  F  Q  G  R  E  R  K  E  I  M  E  E  S  E  V  P  A  C  G  V  S  F  I  A  W  V  F  E  R  Q  R  I  H  S  G  S  L  P  G  R  M  A  I  E  A  S  I  A  Q  H  L  H  N  S  Q  *  D  P  Q  C  L  D  :  A  F  D  R  V  L  P  L  P  C  A  H  N  L  Y  C  N  Q  S  S  Q  G  C  R  S  T  F  L  T  E  S  A  *  C  A  K  E  G  *  F  A  Q  I  T  S  R  T  F  N  L  S  S  F  F  A  V  Y  A  *  F  A  Q  T  S  R  W  F  A  T  F  T  L  *  L  A  Y  Y  *  P  P  A  Q  L  S  A  *  A  I  F  P  Q  Q  P  Y  R  C  L  C  T   : A  E  C  K  R  R  C  G  K  Y  I  S  T  I  A  G  E  T  N  N  S  L  A  I  L  C  L  P  W  W  G  N  V  L  F  V  S  K  Q  H  M  S  F  T  F  L  P  F  R  A  F  I  I  H  H  V  E  A  R  L  C  W  Y  R  C  P  D  I  N  F  I  L  P  S  G  L  L  F  L  H  V  L  P  L  L  L  Q  S  V  P  G  I  Y  Y  P  P  G  N  W  H  N  L  G  F  P  T  S  C  V  P  D  S  R  I  S  S  Y  S  S  I  S  I  L  W  N  G  P </first_frame>
            <second_frame>  *  I  W  F  H  K  S  F  F  F  P  L  L  L  V  H  A  K  N  R  I  P  *  F  R  P  K  I  K  G  *  G  S  T  I  K  K  H  V  I  I  S  V  G  F  L  N  C  M  L  Y  *  Q  L  L  Y  A  I  L  I  L  L  L  L  G  L  G  S  V  C  L  F  S  L  I  R  I  F  V  L  T  D  K  K  L  N  V  K  M  G  K  G  K  E  K  L  T  G  N  G  S  R  E  D  N  E  L  L  S  P  S  K  E  G  K  G  K  R  L  W  K  K  V  K  Y  Q  L  V  E  Y  H  S  L  P  G  Y  L  K  D  N  E  Y  I  L  G  H  Y  R  A  E  W  P  L  K  Q  A  L  L  S  I  F  T  I  H  N  E  T  L  N  V  W  T :   H  L  I  G  F  F  L  F  L  A  L  T  I  Y  T  A  T  K  V  P  K  V  V  D  L  H  S  L  Q  N  L  P  D  V  L  R  K  A  D  L  H  K  L  Q  A  E  L  L  T  C  L  P  S  L  P  Y  M  P  D  L  H  K  L  R  D  G  L  L  R  S  P  S  N  W  H  I  I  D  L  L  H  N  C  L  P  E  R  F  S  H  S  N  H  T  D  V  C  V  L  :  R  S  V  K  E  D  V  A  N  I  L  A  P  L  L  V  R  P  I  T  R  W  P  F  Y  A  F  L  G  G  A  M  F  C  L  L  A  S  S  T  C  H  L  L  S  C  H  S  E  R  L  S  Y  I  M  L  R  L  D  Y  A  G  I  A  A  L  I  S  T  S  F  Y  P  P  V  Y  Y  S  F  M  C  Y  P  F  F  C  N  L  Y  L  G  F  I  T  L  L  G  I  G  T  I  L  G  S  L  L  P  V  F  Q  T  P  E  Y  R  V  I  R  A  S  L  F  F  G  M  G   </second_frame>
            <third_frame>   K  F  G  F  T  R  A  F  F  F  L  F  F  L  F  M  P  R  I  A  S  P  N  F  V  Q  R  L  R  V  R  V  L  R  S  R  N  T  L  S  S  L  L  G  S  *  I  V  C  C  I  S  N  F  S  T  Q  F  S  F  C  Y  C  *  D  S  D  L  F  V  C  L  A  *  S  G  F  L  Y  *  Q  I  R  N  *  M  *  R  W  V  R  A  K  R  N  *  L  V  M  G  Q  G  R  I  M  N  Y  C  L  L  P  R  K  G  K  E  R  D  Y  G  R  K  *  S  T  S  L  W  S  I  I  H  C  L  G  I  *  K  T  T  N  T  F  W  V  I  T  G  P  N  G  H  *  S  K  H  C  S  A  S  S  Q  F  T  M  R  P  S  M  F  G   : R  I  *  *  G  S  S  S  S  L  R  S  Q  F  I  L  Q  P  K  F  P  R  L  *  I  Y  I  P  Y  R  I  C  L  M  C  *  G  R  L  I  C  T  N  Y  K  Q  N  F  *  L  V  F  L  L  C  R  I  C  L  I  C  T  N  F  E  M  V  C  Y  V  H  P  L  I  G  I  L  L  T  S  C  T  T  V  C  L  S  D  F  P  T  A  T  I  Q  M  F  V  Y  C :   G  V  *  K  K  M  W  Q  I  Y  *  H  H  C  W  *  D  Q  *  L  A  G  H  S  M  P  S  L  V  G  Q  C  F  V  C  *  Q  A  A  H  V  I  Y  F  L  A  I  Q  S  V  Y  H  T  S  C  *  G  S  T  M  L  V  S  L  P  *  Y  Q  L  H  F  T  L  R  S  I  I  P  S  C  V  T  P  S  F  A  I  C  T  W  D  L  L  P  S  W  E  L  A  Q  S  W  V  P  Y  F  L  C  S  R  L  P  N  I  E  L  F  E  H  L  Y  S  L  E  W  A  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0030E13.1" strand="+"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="65486" stop="65844"/>
                    <exon start="66554" stop="66851"/>
                    <exon start="67674" stop="68051"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1035</number_coding_nucleotides>
                  <number_encoded_amino_acids>345</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QLLYAILILLLLGLGSVCLFSLIRIFVLTDKKLNVKMGKGKEKLTGNGSREDNELLSPSKEGKGKRLWKKVKYQLVEYHSLPGYLKDNEYILGHYRAEWPLKQALLSIFTIHNETLNVWTHLIGFFLFLALTIYTATKVPKVVDLHSLQNLPDVLRKADLHKLQAELLTCLPSLPYMPDLHKLRDGLLRSPSNWHIIDLLHNCLPERFSHSNHTDVCVLRSVKEDVANILAPLLVRPITRWPFYAFLGGAMFCLLASSTCHLLSCHSERLSYIMLRLDYAGIAALISTSFYPPVYYSFMCYPFFCNLYLGFITLLGIGTILGSLLPVFQTPEYRVIRASLFFGMG</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="+" PGL_start="74562" PGL_stop="76378"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="74562" e_stop="76378"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.999"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.999">
            <gDNA_exon_boundary e_start="74562" e_stop="76378" e_length="1817"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="74562" stop="76378"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U573877" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CAGACAATGGCAGCAAGTTTAGTGAGGTGATGAACACTTGTTTCTACTCACTTCACTTCACCGACACCCATCTCCTTATCTACTTTTCTATCGTCACATACTCGACGGAATTTGTATGCTTTCTTAGTTACTGCCAAAATTGCTCTTCGAACTATCTTCTTAACACACAGAACCAAAGCTGGACACAATGTCCAGTAGATGGTGACAACTTTTTTATTGCTACTAGACGTAAAGCCAGCTTGCCTGGGTAACGTATGCACTCCCTCATAAAATGGTAACGCCTCAGTTGCCCCAAACTCATACATCTTACACATCCATGGCTAAGCAAAACTGTAGAAGTAAAATTTCTTCTATTTTCTCTGATGGATTTCTCTTTGCTGGTGCAAGTATTGTGGCTTTGCTAGTAATATGGGCCTTTTGGTCCTTCATGAGCACTAGTCCAAATGCCGATCCCAGTTTTTTAACCACTTCCGCCGACCAAAACTCCGCCTTGAAAACTCAGGTAGACCCGGTTTCATTAGGCTTCAATTTACGGTACGACCCGCCCGACCCGACTTTCTATGACGACCCGGATTTGAGTTACACTATGGAGAAGCCGATTAAGAAGTGGGACGAGAAACGAAGGCAATGGCTGAATTTGCATCCCTCTTTCATCCCCGGAGCAGAGGAACGGATTCTGATGGTTTCCGGTTCACAGTCGACGCCGTGTAAGAACCCAATAGGCGACCATTTGCTGCTTAGATTCTTCAAGAACAAAGTAGACTACTGCCGAATCCACGGGTACGATATTTTTTACAACAACGTTTTACTTCAGCCTAAGATGTGGTCGTTTTGGGCGAAAATGCCGGCGATTAAAGCTGCCATGATAGCTCATCCTGAAACTGAGTGGATCTGGTGGGTCGATTCAGATGCTGCGTTCACCGACATGGACTTCAAACTTCCTTTGGATCGTTACAAAGACCATAATTTCGTACTTCATGGTTGGGAAAAGTTATTATACGAGCAACAAAGCTGGACAAGCATCAATGCCGGAGTTTTCTTGATTCGGAACTGTCAATGGTCCATGGACTTAATGGAAACTTGGGCGAAAATGGGGCCACAGTCACCGGAATACGACAAGTGGGGTGAAATCTTACATACAACTTTCAAAGACAAGATATTCCAGGAATCGGATGACCAATCCGGTCTAGCATATCTACTTTTGAAGGAAAAGGAAAAATGGGGTAACAAAATATACGTAGAAGGGGGATATTACTTCGAGGGGTATTGGGTGGAAATCGTGGGAACGTACGATAACATCACCGACAGGTATTTAGCAATAGAGAAAAGTGAAGGGAGGCTAAGAAGAAGACACGCAGAGAGGGTGAGTGAGAGTTATGCTAGTGTATGGGAAGAACACCTTAAGGAAGCTGGGTATGGGAGATACAGTTGGAGAAGGCCATTCATCACACATTTCACAGGGTGTCAGCCATGTAGTGGAGATCATAATCAGATGTATTCTGGTGAAACTTGTTTTGATGCTATGCAGAAAGCTTTGAATTTTGCTGATAATCAGGTGTTGAGAAAGTATGGGTATATGCATAAGGATCTGCTTGATTCTTCCTCTGTTTTTCCTGTTCCTTTTAACTTTCCTGCCTAATACTTCCGTTCTTTTAAGTTCTATGTATACACATGTATGTACCTATTTTGTAGTAGTTTGCTTTCGTTTTACTTCGTATTTTTATGGTGCAATGTTGTAAGCTAGTTGTAATATGGAGTTTAACTTATATATAGTCACCACTTGAAGAAATTTATACTATTCAAACAGTGTTTTTTTT</gDNA_template>
            <first_frame> Q  T  M  A  A  S  L  V  R  *  *  T  L  V  S  T  H  F  T  S  P  T  P  I  S  L  S  T  F  L  S  S  H  T  R  R  N  L  Y  A  F  L  V  T  A  K  I  A  L  R  T  I  F  L  T  H  R  T  K  A  G  H  N  V  Q  *  M  V  T  T  F  L  L  L  L  D  V  K  P  A  C  L  G  N  V  C  T  P  S  *  N  G  N  A  S  V  A  P  N  S  Y  I  L  H  I  H  G  *  A  K  L  *  K  *  N  F  F  Y  F  L  *  W  I  S  L  C  W  C  K  Y  C  G  F  A  S  N  M  G  L  L  V  L  H  E  H  *  S  K  C  R  S  Q  F  F  N  H  F  R  R  P  K  L  R  L  E  N  S  G  R  P  G  F  I  R  L  Q  F  T  V  R  P  A  R  P  D  F  L  *  R  P  G  F  E  L  H  Y  G  E  A  D  *  E  V  G  R  E  T  K  A  M  A  E  F  A  S  L  F  H  P  R  S  R  G  T  D  S  D  G  F  R  F  T  V  D  A  V  *  E  P  N  R  R  P  F  A  A  *  I  L  Q  E  Q  S  R  L  L  P  N  P  R  V  R  Y  F  L  Q  Q  R  F  T  S  A  *  D  V  V  V  L  G  E  N  A  G  D  *  S  C  H  D  S  S  S  *  N  *  V  D  L  V  G  R  F  R  C  C  V  H  R  H  G  L  Q  T  S  F  G  S  L  Q  R  P  *  F  R  T  S  W  L  G  K  V  I  I  R  A  T  K  L  D  K  H  Q  C  R  S  F  L  D  S  E  L  S  M  V  H  G  L  N  G  N  L  G  E  N  G  A  T  V  T  G  I  R  Q  V  G  *  N  L  T  Y  N  F  Q  R  Q  D  I  P  G  I  G  *  P  I  R  S  S  I  S  T  F  E  G  K  G  K  M  G  *  Q  N  I  R  R  R  G  I  L  L  R  G  V  L  G  G  N  R  G  N  V  R  *  H  H  R  Q  V  F  S  N  R  E  K  *  R  E  A  K  K  K  T  R  R  E  G  E  *  E  L  C  *  C  M  G  R  T  P  *  G  S  W  V  W  E  I  Q  L  E  K  A  I  H  H  T  F  H  R  V  S  A  M  *  W  R  S  *  S  D  V  F  W  *  N  L  F  *  C  Y  A  E  S  F  E  F  C  *  *  S  G  V  E  K  V  W  V  Y  A  *  G  S  A  *  F  F  L  C  F  S  C  S  F  *  L  S  C  L  I  L  P  F  F  *  V  L  C  I  H  M  Y  V  P  I  L  *  *  F  A  F  V  L  L  R  I  F  M  V  Q  C  C  K  L  V  V  I  W  S  L  T  Y  I  *  S  P  L  E  E  I  Y  T  I  Q  T  V  F  F   </first_frame>
            <second_frame>  R  Q  W  Q  Q  V  *  *  G  D  E  H  L  F  L  L  T  S  L  H  R  H  P  S  P  Y  L  L  F  Y  R  H  I  L  D  G  I  C  M  L  S  *  L  L  P  K  L  L  F  E  L  S  S  *  H  T  E  P  K  L  D  T  M  S  S  R  W  *  Q  L  F  Y  C  Y  *  T  *  S  Q  L  A  W  V  T  Y  A  L  P  H  K  M  V  T  P  Q  L  P  Q  T  H  T  S  Y  T  S  M  A  K  Q  N  C  R  S  K  I  S  S  I  F  S  D  G  F  L  F  A  G  A  S  I  V  A  L  L  V  I  W  A  F  W  S  F  M  S  T  S  P  N  A  D  P  S  F  L  T  T  S  A  D  Q  N  S  A  L  K  T  Q  V  D  P  V  S  L  G  F  N  L  R  Y  D  P  P  D  P  T  F  Y  D  D  P  D  L  S  Y  T  M  E  K  P  I  K  K  W  D  E  K  R  R  Q  W  L  N  L  H  P  S  F  I  P  G  A  E  E  R  I  L  M  V  S  G  S  Q  S  T  P  C  K  N  P  I  G  D  H  L  L  L  R  F  F  K  N  K  V  D  Y  C  R  I  H  G  Y  D  I  F  Y  N  N  V  L  L  Q  P  K  M  W  S  F  W  A  K  M  P  A  I  K  A  A  M  I  A  H  P  E  T  E  W  I  W  W  V  D  S  D  A  A  F  T  D  M  D  F  K  L  P  L  D  R  Y  K  D  H  N  F  V  L  H  G  W  E  K  L  L  Y  E  Q  Q  S  W  T  S  I  N  A  G  V  F  L  I  R  N  C  Q  W  S  M  D  L  M  E  T  W  A  K  M  G  P  Q  S  P  E  Y  D  K  W  G  E  I  L  H  T  T  F  K  D  K  I  F  Q  E  S  D  D  Q  S  G  L  A  Y  L  L  L  K  E  K  E  K  W  G  N  K  I  Y  V  E  G  G  Y  Y  F  E  G  Y  W  V  E  I  V  G  T  Y  D  N  I  T  D  R  Y  L  A  I  E  K  S  E  G  R  L  R  R  R  H  A  E  R  V  S  E  S  Y  A  S  V  W  E  E  H  L  K  E  A  G  Y  G  R  Y  S  W  R  R  P  F  I  T  H  F  T  G  C  Q  P  C  S  G  D  H  N  Q  M  Y  S  G  E  T  C  F  D  A  M  Q  K  A  L  N  F  A  D  N  Q  V  L  R  K  Y  G  Y  M  H  K  D  L  L  D  S  S  S  V  F  P  V  P  F  N  F  P  A  *  Y  F  R  S  F  K  F  Y  V  Y  T  C  M  Y  L  F  C  S  S  L  L  S  F  Y  F  V  F  L  W  C  N  V  V  S  *  L  *  Y  G  V  *  L  I  Y  S  H  H  L  K  K  F  I  L  F  K  Q  C  F  F  </second_frame>
            <third_frame>   D  N  G  S  K  F  S  E  V  M  N  T  C  F  Y  S  L  H  F  T  D  T  H  L  L  I  Y  F  S  I  V  T  Y  S  T  E  F  V  C  F  L  S  Y  C  Q  N  C  S  S  N  Y  L  L  N  T  Q  N  Q  S  W  T  Q  C  P  V  D  G  D  N  F  F  I  A  T  R  R  K  A  S  L  P  G  *  R  M  H  S  L  I  K  W  *  R  L  S  C  P  K  L  I  H  L  T  H  P  W  L  S  K  T  V  E  V  K  F  L  L  F  S  L  M  D  F  S  L  L  V  Q  V  L  W  L  C  *  *  Y  G  P  F  G  P  S  *  A  L  V  Q  M  P  I  P  V  F  *  P  L  P  P  T  K  T  P  P  *  K  L  R  *  T  R  F  H  *  A  S  I  Y  G  T  T  R  P  T  R  L  S  M  T  T  R  I  *  V  T  L  W  R  S  R  L  R  S  G  T  R  N  E  G  N  G  *  I  C  I  P  L  S  S  P  E  Q  R  N  G  F  *  W  F  P  V  H  S  R  R  R  V  R  T  Q  *  A  T  I  C  C  L  D  S  S  R  T  K  *  T  T  A  E  S  T  G  T  I  F  F  T  T  T  F  Y  F  S  L  R  C  G  R  F  G  R  K  C  R  R  L  K  L  P  *  *  L  I  L  K  L  S  G  S  G  G  S  I  Q  M  L  R  S  P  T  W  T  S  N  F  L  W  I  V  T  K  T  I  I  S  Y  F  M  V  G  K  S  Y  Y  T  S  N  K  A  G  Q  A  S  M  P  E  F  S  *  F  G  T  V  N  G  P  W  T  *  W  K  L  G  R  K  W  G  H  S  H  R  N  T  T  S  G  V  K  S  Y  I  Q  L  S  K  T  R  Y  S  R  N  R  M  T  N  P  V  *  H  I  Y  F  *  R  K  R  K  N  G  V  T  K  Y  T  *  K  G  D  I  T  S  R  G  I  G  W  K  S  W  E  R  T  I  T  S  P  T  G  I  *  Q  *  R  K  V  K  G  G  *  E  E  D  T  Q  R  G  *  V  R  V  M  L  V  Y  G  K  N  T  L  R  K  L  G  M  G  D  T  V  G  E  G  H  S  S  H  I  S  Q  G  V  S  H  V  V  E  I  I  I  R  C  I  L  V  K  L  V  L  M  L  C  R  K  L  *  I  L  L  I  I  R  C  *  E  S  M  G  I  C  I  R  I  C  L  I  L  P  L  F  F  L  F  L  L  T  F  L  P  N  T  S  V  L  L  S  S  M  Y  T  H  V  C  T  Y  F  V  V  V  C  F  R  F  T  S  Y  F  Y  G  A  M  L  *  A  S  C  N  M  E  F  N  L  Y  I  V  T  T  *  R  N  L  Y  Y  S  N  S  V  F  F </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0030E13.1" strand="+"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="74794" stop="76200"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1404</number_coding_nucleotides>
                  <number_encoded_amino_acids>468</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SQLAWVTYALPHKMVTPQLPQTHTSYTSMAKQNCRSKISSIFSDGFLFAGASIVALLVIWAFWSFMSTSPNADPSFLTTSADQNSALKTQVDPVSLGFNLRYDPPDPTFYDDPDLSYTMEKPIKKWDEKRRQWLNLHPSFIPGAEERILMVSGSQSTPCKNPIGDHLLLRFFKNKVDYCRIHGYDIFYNNVLLQPKMWSFWAKMPAIKAAMIAHPETEWIWWVDSDAAFTDMDFKLPLDRYKDHNFVLHGWEKLLYEQQSWTSINAGVFLIRNCQWSMDLMETWAKMGPQSPEYDKWGEILHTTFKDKIFQESDDQSGLAYLLLKEKEKWGNKIYVEGGYYFEGYWVEIVGTYDNITDRYLAIEKSEGRLRRRHAERVSESYASVWEEHLKEAGYGRYSWRRPFITHFTGCQPCSGDHNQMYSGETCFDAMQKALNFADNQVLRKYGYMHKDLLDSSSVFPVPFNFPA*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0030E13.1" strand="+"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="74564" stop="74812"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>246</number_coding_nucleotides>
                  <number_encoded_amino_acids>82</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DNGSKFSEVMNTCFYSLHFTDTHLLIYFSIVTYSTEFVCFLSYCQNCSSNYLLNTQNQSWTQCPVDGDNFFIATRRKASLPG*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="-" PGL_start="80751" PGL_stop="80400"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="80751" e_stop="80400"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.997">
            <gDNA_exon_boundary e_start="80751" e_stop="80400" e_length="352"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80751" stop="80400"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U599341" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GCCGTTTATCACGCACTTCACGGGGTGTCAGCCATGTAGTGGGGACCACGCGACGGAGTATGTGGGTGATTCATGTTGGGTGGGAATGGAACGAGCGTTGAACTTTGCGGATAATCAGGTGCTACGTAACTTTGGGTTCATGCATGATGACATCAAAAGTAATTCCCCTGTCTCTCCCTTAAATTTCGATTTTCCGGCTGAAGACAGTGAAGAATTCGTGTGAAAGAAAAAAAACATGACCTCAGGTTTTTACTGTAGGATTAAAAAGACACAAGTCCTGTGAATTTTGGATGTTCTTTTAATTCAGTATCAATGTATTTGATAGTTATTGTAATAGTAAACAATGTTTTTT</gDNA_template>
            <first_frame> A  V  Y  H  A  L  H  G  V  S  A  M  *  W  G  P  R  D  G  V  C  G  *  F  M  L  G  G  N  G  T  S  V  E  L  C  G  *  S  G  A  T  *  L  W  V  H  A  *  *  H  Q  K  *  F  P  C  L  S  L  K  F  R  F  S  G  *  R  Q  *  R  I  R  V  K  E  K  K  H  D  L  R  F  L  L  *  D  *  K  D  T  S  P  V  N  F  G  C  S  F  N  S  V  S  M  Y  L  I  V  I  V  I  V  N  N  V  F  </first_frame>
            <second_frame>  P  F  I  T  H  F  T  G  C  Q  P  C  S  G  D  H  A  T  E  Y  V  G  D  S  C  W  V  G  M  E  R  A  L  N  F  A  D  N  Q  V  L  R  N  F  G  F  M  H  D  D  I  K  S  N  S  P  V  S  P  L  N  F  D  F  P  A  E  D  S  E  E  F  V  *  K  K  K  N  M  T  S  G  F  Y  C  R  I  K  K  T  Q  V  L  *  I  L  D  V  L  L  I  Q  Y  Q  C  I  *  *  L  L  *  *  *  T  M  F  F </second_frame>
            <third_frame>   R  L  S  R  T  S  R  G  V  S  H  V  V  G  T  T  R  R  S  M  W  V  I  H  V  G  W  E  W  N  E  R  *  T  L  R  I  I  R  C  Y  V  T  L  G  S  C  M  M  T  S  K  V  I  P  L  S  L  P  *  I  S  I  F  R  L  K  T  V  K  N  S  C  E  R  K  K  T  *  P  Q  V  F  T  V  G  L  K  R  H  K  S  C  E  F  W  M  F  F  *  F  S  I  N  V  F  D  S  Y  C  N  S  K  Q  C  F   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0030E13.1" strand="-"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="80750" stop="80529"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>219</number_coding_nucleotides>
                  <number_encoded_amino_acids>73</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PFITHFTGCQPCSGDHATEYVGDSCWVGMERALNFADNQVLRNFGFMHDDIKSNSPVSPLNFDFPAEDSEEFV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="-" PGL_start="81946" PGL_stop="81824"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="81946" e_stop="81824"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.984"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.984">
            <gDNA_exon_boundary e_start="81946" e_stop="81824" e_length="123"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81946" stop="81824"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U597718" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTTCACATTGCATTCCTTGTGACTTTGAGACCTTCTCACTCACATACCATAGTTTCAGTATCTTTCCTTTTCATTCACAACGGGCCATGGCCCATAACGTGTTTCGGGCCAAACAGCAATCGT</gDNA_template>
            <first_frame> F  H  I  A  F  L  V  T  L  R  P  S  H  S  H  T  I  V  S  V  S  F  L  F  I  H  N  G  P  W  P  I  T  C  F  G  P  N  S  N  R </first_frame>
            <second_frame>  F  T  L  H  S  L  *  L  *  D  L  L  T  H  I  P  *  F  Q  Y  L  S  F  S  F  T  T  G  H  G  P  *  R  V  S  G  Q  T  A  I   </second_frame>
            <third_frame>   S  H  C  I  P  C  D  F  E  T  F  S  L  T  Y  H  S  F  S  I  F  P  F  H  S  Q  R  A  M  A  H  N  V  F  R  A  K  Q  Q  S  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0030E13.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="-" PGL_start="85405" PGL_stop="84169"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="85405" e_stop="85282"/>
            <exon e_start="85201" e_stop="85144"/>
            <exon e_start="85056" e_stop="84814"/>
            <exon e_start="84470" e_stop="84169"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="1.000" e_score="0.992"/>
          <exon-intron don_prob="0.567" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.949" acc_prob="0.889" e_score="0.996"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.992">
            <gDNA_exon_boundary e_start="85405" e_stop="85282" e_length="124"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="1.000">
            <gDNA_intron_boundary i_start="85281" i_stop="85202" i_length="80"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="85201" e_stop="85144" e_length="58"/>
          </exon>
          <intron i_serial="2" don_prob="0.567" acc_prob="0.993">
            <gDNA_intron_boundary i_start="85143" i_stop="85057" i_length="87"/>
          </intron>
          <exon e_serial="3" e_score="0.996">
            <gDNA_exon_boundary e_start="85056" e_stop="84814" e_length="243"/>
          </exon>
          <intron i_serial="3" don_prob="0.949" acc_prob="0.889">
            <gDNA_intron_boundary i_start="84813" i_stop="84471" i_length="343"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="84470" e_stop="84169" e_length="302"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="85405" stop="85282"/>
              <exon start="85201" stop="85144"/>
              <exon start="85056" stop="84814"/>
              <exon start="84470" stop="84169"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U599647" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGTGAAGAGAAAACGTGGTAAAAATAAATTTAGCTTCGGCATGAAGAGAGAAGAGAAACGGCAAAAGCTCCATGAAAGGCTCCTTAGGATGCTCTATCCTCCCCCACCATCACCTCCTTCCCAA : GAAGAAAACGATGACGACGAACCATTTGACATTCTCCAACAAGGCGATCAAATTCCAG : ATGAACTGGAAGAGGATAGGGGTTCTTCCTCCTCTGGCGACCAAGAGACTAATCATGGTCCTGACAAGCTAACAAGGGCACAGAGGAAGAGGATTCGACGGAAGAAGCTTAAGGAAGCTTCCTCACGCCGCCAGAATATAATAGGGCCGTTGTTGCCTACTGAAGAGAGTGATCTAGAGGGTGTAAATGTGAGTACGCCAGATGAGGAGCCACAAGGTGTTCGACAAAATGCCAACGAGACAG : ATGATGCAGATTCTTGCCTGAAACAAAACAAACAAAAACAAAGAAGAATGGCTAAACGGTTGGTTGGTGGTAGCTCAAAGTCAACTGGGGGTGGCAACAAGAATTGAAAGCTTCATTTCTTTGGTCGAGGGATAAGAAAACTTGACTGACTGCTTAAAAAAGGGTCACTGCAAAGTGAAAATGTTGAAATATACAACTGCTGACAAATTTTTAAGAGGTTGTCTTGTTCTTTCACAACTCTGAGGCATGTTTTTTTATAGTAGCAAATGTTCACTAAATAGTAGTTAATTTAGTGATTTGTT</gDNA_template>
            <first_frame> S  E  E  K  T  W  *  K  *  I  *  L  R  H  E  E  R  R  E  T  A  K  A  P  *  K  A  P  *  D  A  L  S  S  P  T  I  T  S  F  P   : R  R  K  R  *  R  R  T  I  *  H  S  P  T  R  R  S  N  S  R :   *  T  G  R  G  *  G  F  F  L  L  W  R  P  R  D  *  S  W  S  *  Q  A  N  K  G  T  E  E  E  D  S  T  E  E  A  *  G  S  F  L  T  P  P  E  Y  N  R  A  V  V  A  Y  *  R  E  *  S  R  G  C  K  C  E  Y  A  R  *  G  A  T  R  C  S  T  K  C  Q  R  D  R :   *  C  R  F  L  P  E  T  K  Q  T  K  T  K  K  N  G  *  T  V  G  W  W  *  L  K  V  N  W  G  W  Q  Q  E  L  K  A  S  F  L  W  S  R  D  K  K  T  *  L  T  A  *  K  R  V  T  A  K  *  K  C  *  N  I  Q  L  L  T  N  F  *  E  V  V  L  F  F  H  N  S  E  A  C  F  F  I  V  A  N  V  H  *  I  V  V  N  L  V  I  C  </first_frame>
            <second_frame>  V  K  R  K  R  G  K  N  K  F  S  F  G  M  K  R  E  E  K  R  Q  K  L  H  E  R  L  L  R  M  L  Y  P  P  P  P  S  P  P  S  Q  :  E  E  N  D  D  D  E  P  F  D  I  L  Q  Q  G  D  Q  I  P   : D  E  L  E  E  D  R  G  S  S  S  S  G  D  Q  E  T  N  H  G  P  D  K  L  T  R  A  Q  R  K  R  I  R  R  K  K  L  K  E  A  S  S  R  R  Q  N  I  I  G  P  L  L  P  T  E  E  S  D  L  E  G  V  N  V  S  T  P  D  E  E  P  Q  G  V  R  Q  N  A  N  E  T   : D  D  A  D  S  C  L  K  Q  N  K  Q  K  Q  R  R  M  A  K  R  L  V  G  G  S  S  K  S  T  G  G  G  N  K  N  *  K  L  H  F  F  G  R  G  I  R  K  L  D  *  L  L  K  K  G  S  L  Q  S  E  N  V  E  I  Y  N  C  *  Q  I  F  K  R  L  S  C  S  F  T  T  L  R  H  V  F  L  *  *  Q  M  F  T  K  *  *  L  I  *  *  F  V </second_frame>
            <third_frame>   *  R  E  N  V  V  K  I  N  L  A  S  A  *  R  E  K  R  N  G  K  S  S  M  K  G  S  L  G  C  S  I  L  P  H  H  H  L  L  P  K :   K  K  T  M  T  T  N  H  L  T  F  S  N  K  A  I  K  F  Q  :  M  N  W  K  R  I  G  V  L  P  P  L  A  T  K  R  L  I  M  V  L  T  S  *  Q  G  H  R  G  R  G  F  D  G  R  S  L  R  K  L  P  H  A  A  R  I  *  *  G  R  C  C  L  L  K  R  V  I  *  R  V  *  M  *  V  R  Q  M  R  S  H  K  V  F  D  K  M  P  T  R  Q  :  M  M  Q  I  L  A  *  N  K  T  N  K  N  K  E  E  W  L  N  G  W  L  V  V  A  Q  S  Q  L  G  V  A  T  R  I  E  S  F  I  S  L  V  E  G  *  E  N  L  T  D  C  L  K  K  G  H  C  K  V  K  M  L  K  Y  T  T  A  D  K  F  L  R  G  C  L  V  L  S  Q  L  *  G  M  F  F  Y  S  S  K  C  S  L  N  S  S  *  F  S  D  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0030E13.1" strand="-"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="85404" stop="85282"/>
                    <exon start="85201" stop="85144"/>
                    <exon start="85056" stop="84814"/>
                    <exon start="84470" stop="84364"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>528</number_coding_nucleotides>
                  <number_encoded_amino_acids>176</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VKRKRGKNKFSFGMKREEKRQKLHERLLRMLYPPPPSPPSQEENDDDEPFDILQQGDQIPDELEEDRGSSSSGDQETNHGPDKLTRAQRKRIRRKKLKEASSRRQNIIGPLLPTEESDLEGVNVSTPDEEPQGVRQNANETDDADSCLKQNKQKQRRMAKRLVGGSSKSTGGGNKN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="15" PGL_strand="+" PGL_start="99378" PGL_stop="103564"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="99378" e_stop="100143"/>
            <exon e_start="101124" e_stop="101314"/>
            <exon e_start="102689" e_stop="103564"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.988" acc_prob="0.963" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.987" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="99378" e_stop="100143" e_length="766"/>
          </exon>
          <intron i_serial="1" don_prob="0.988" acc_prob="0.963">
            <gDNA_intron_boundary i_start="100144" i_stop="101123" i_length="980"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="101124" e_stop="101314" e_length="191"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.987">
            <gDNA_intron_boundary i_start="101315" i_stop="102688" i_length="1374"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="102689" e_stop="103564" e_length="876"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="99378" stop="100143"/>
              <exon start="101124" stop="101314"/>
              <exon start="102689" stop="103564"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U571988" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTTCGAAGCAACAAACACCAATTATTAGGCGACCCCAAAACGTGACGTAGCTTTGTCTTGCTTGTCTGTCCTTGAGCTCATATTTGCTTGTCGATTGCGAAGTTCCCAACTGTCTTAGCCAAATTAGTCTTCGCCGGTGAACTGTGAAACCTCCATCTAACAATGTCCTGGTTTGCTCGATCTATTGCCAGCACTCTCAGACTTGAAGACGACGACGATGACAGAGACGACGCCGTGTCAAGCAATCACGATCACTCTACTGGCAAACCTACTACGGAGAAGCAACAGAAAGATGAGGATGATTCATTGCCAGTATCACCGTCACGCGGCGTTAAGGATGACTTCTCAGAGCTCACTAAAACCCTAACCCGTCAGTTTTGGGGAGTGGCCTCTTTCCTGGCCCCACCGTCCCAATCCGAGCCCGACAAATCTTTACTGGATCCGACTTCAGAACCAGCTCGAGATTCGGATGACGAGGAGTCCGATTCTGCGGGGATCGCGGGTTTGCGGAGTGATATTGCTGAAATTGGGGGGAGATTCAAGAGTGGGATATCTAAGCTTTCGAAGAATATTCCCGTGTCGGAAATCACCAAAATGGCGTCCAACTTACTGCAACTGGGACCGGAGGAGGAAGAAGATAAGAGGTTTGATTCAGGTAGAGGTGCAGTTGGTGTTACTGAGGAAGTAGTGGCTTTTGTGAGGGACATTGCTATGCATCCTGAGACATGGTTGGATTTCCCTTTGTTCGAGGATGAAGATGACGAAG : TAGATTTTGACTTGTCTGATGCACAACAAGAGCATGCATTAGCTGTTGAGCGTTTTGCTCCAAGACTGGCTGCTTTGAGGATTGAGCTCTGCCCAGGCTACATGAATGAGGCTCGCTTTTGGGAGATTTACTTTGTTCTTCTGCACCCTAGACTGAATAAACAAGATGCTGAACTTCTATCCACACCCCAG : GTATTCAATGCCAGGGCCTCATTATCGCAAGAGTTACAAAAACGAACCAAGCCAATAGAAGGAGATTGGTCAAAGGAGGAGACTTTTAAATCAACTGACGGGGGTGGTTCTCAACATGAGGAGATGCTTACTGTCCCTTCTGCTCCGCTCTCCGCGGATGCGGTTCAAGACATGTCTAGTGTGGATGTTTCCTCTTTATCTGTAGTGGTCGGCTCTGGTACCGATGTGCACCCTGTCATTAGTGAAAATCAAACAGTTGATAGACTTGTGGCTGAAGAAGGACCTATTACCCTAAGCAAAGATGAAAAATTGCAATCTGCATCAGCGACTAAGTTAGAGGAGAGTGACGAAGAGGATGCTGATGATTGGTTGAAGGAAGAAAACACGGAAATTACAGGTACCAGTAAAACCACCATGTCTTTTGAGGATGATGAGGATGTGTCTTTCAGTGATCTTGAAGAGGATGATTCAGATATGCCTGCAAAATCAAAAAACGCAGCTTACAGCTCTGATAAGGACTCACAAGATTGGGTCCAGTTGAGGAAAAGCTCCACCGACTTGTCTAGAGATTCCAGCTCCATCAATCAGATTAGTTCTGTTAAGGAAAATCCTGATAGCAAAGAATCAAATGATTGGCTGGATATTGATGACCTTGAGGTGGCGTGAACTTATGTAAGATTTAAATATAGTTGTTGTTCCGCTCATTTCTTGTGAATAGCTATTCCCCATCCTCCAGTCCGTACTCTCCGCTGAGAACTCCTTAACTGTATTGTTTGTACATAGAACGCCTAATGAAAGACAATCGGGTTGTAATATAGTGTTCATGATATTAATTGATGGTAGCTTCCTGCTTGTGTCACTACATGAGCATATATA</gDNA_template>
            <first_frame> F  R  S  N  K  H  Q  L  L  G  D  P  K  T  *  R  S  F  V  L  L  V  C  P  *  A  H  I  C  L  S  I  A  K  F  P  T  V  L  A  K  L  V  F  A  G  E  L  *  N  L  H  L  T  M  S  W  F  A  R  S  I  A  S  T  L  R  L  E  D  D  D  D  D  R  D  D  A  V  S  S  N  H  D  H  S  T  G  K  P  T  T  E  K  Q  Q  K  D  E  D  D  S  L  P  V  S  P  S  R  G  V  K  D  D  F  S  E  L  T  K  T  L  T  R  Q  F  W  G  V  A  S  F  L  A  P  P  S  Q  S  E  P  D  K  S  L  L  D  P  T  S  E  P  A  R  D  S  D  D  E  E  S  D  S  A  G  I  A  G  L  R  S  D  I  A  E  I  G  G  R  F  K  S  G  I  S  K  L  S  K  N  I  P  V  S  E  I  T  K  M  A  S  N  L  L  Q  L  G  P  E  E  E  E  D  K  R  F  D  S  G  R  G  A  V  G  V  T  E  E  V  V  A  F  V  R  D  I  A  M  H  P  E  T  W  L  D  F  P  L  F  E  D  E  D  D  E   : V  D  F  D  L  S  D  A  Q  Q  E  H  A  L  A  V  E  R  F  A  P  R  L  A  A  L  R  I  E  L  C  P  G  Y  M  N  E  A  R  F  W  E  I  Y  F  V  L  L  H  P  R  L  N  K  Q  D  A  E  L  L  S  T  P  Q  :  V  F  N  A  R  A  S  L  S  Q  E  L  Q  K  R  T  K  P  I  E  G  D  W  S  K  E  E  T  F  K  S  T  D  G  G  G  S  Q  H  E  E  M  L  T  V  P  S  A  P  L  S  A  D  A  V  Q  D  M  S  S  V  D  V  S  S  L  S  V  V  V  G  S  G  T  D  V  H  P  V  I  S  E  N  Q  T  V  D  R  L  V  A  E  E  G  P  I  T  L  S  K  D  E  K  L  Q  S  A  S  A  T  K  L  E  E  S  D  E  E  D  A  D  D  W  L  K  E  E  N  T  E  I  T  G  T  S  K  T  T  M  S  F  E  D  D  E  D  V  S  F  S  D  L  E  E  D  D  S  D  M  P  A  K  S  K  N  A  A  Y  S  S  D  K  D  S  Q  D  W  V  Q  L  R  K  S  S  T  D  L  S  R  D  S  S  S  I  N  Q  I  S  S  V  K  E  N  P  D  S  K  E  S  N  D  W  L  D  I  D  D  L  E  V  A  *  T  Y  V  R  F  K  Y  S  C  C  S  A  H  F  L  *  I  A  I  P  H  P  P  V  R  T  L  R  *  E  L  L  N  C  I  V  C  T  *  N  A  *  *  K  T  I  G  L  *  Y  S  V  H  D  I  N  *  W  *  L  P  A  C  V  T  T  *  A  Y  I </first_frame>
            <second_frame>  F  E  A  T  N  T  N  Y  *  A  T  P  K  R  D  V  A  L  S  C  L  S  V  L  E  L  I  F  A  C  R  L  R  S  S  Q  L  S  *  P  N  *  S  S  P  V  N  C  E  T  S  I  *  Q  C  P  G  L  L  D  L  L  P  A  L  S  D  L  K  T  T  T  M  T  E  T  T  P  C  Q  A  I  T  I  T  L  L  A  N  L  L  R  R  S  N  R  K  M  R  M  I  H  C  Q  Y  H  R  H  A  A  L  R  M  T  S  Q  S  S  L  K  P  *  P  V  S  F  G  E  W  P  L  S  W  P  H  R  P  N  P  S  P  T  N  L  Y  W  I  R  L  Q  N  Q  L  E  I  R  M  T  R  S  P  I  L  R  G  S  R  V  C  G  V  I  L  L  K  L  G  G  D  S  R  V  G  Y  L  S  F  R  R  I  F  P  C  R  K  S  P  K  W  R  P  T  Y  C  N  W  D  R  R  R  K  K  I  R  G  L  I  Q  V  E  V  Q  L  V  L  L  R  K  *  W  L  L  *  G  T  L  L  C  I  L  R  H  G  W  I  S  L  C  S  R  M  K  M  T  K  :  *  I  L  T  C  L  M  H  N  K  S  M  H  *  L  L  S  V  L  L  Q  D  W  L  L  *  G  L  S  S  A  Q  A  T  *  M  R  L  A  F  G  R  F  T  L  F  F  C  T  L  D  *  I  N  K  M  L  N  F  Y  P  H  P  R :   Y  S  M  P  G  P  H  Y  R  K  S  Y  K  N  E  P  S  Q  *  K  E  I  G  Q  R  R  R  L  L  N  Q  L  T  G  V  V  L  N  M  R  R  C  L  L  S  L  L  L  R  S  P  R  M  R  F  K  T  C  L  V  W  M  F  P  L  Y  L  *  W  S  A  L  V  P  M  C  T  L  S  L  V  K  I  K  Q  L  I  D  L  W  L  K  K  D  L  L  P  *  A  K  M  K  N  C  N  L  H  Q  R  L  S  *  R  R  V  T  K  R  M  L  M  I  G  *  R  K  K  T  R  K  L  Q  V  P  V  K  P  P  C  L  L  R  M  M  R  M  C  L  S  V  I  L  K  R  M  I  Q  I  C  L  Q  N  Q  K  T  Q  L  T  A  L  I  R  T  H  K  I  G  S  S  *  G  K  A  P  P  T  C  L  E  I  P  A  P  S  I  R  L  V  L  L  R  K  I  L  I  A  K  N  Q  M  I  G  W  I  L  M  T  L  R  W  R  E  L  M  *  D  L  N  I  V  V  V  P  L  I  S  C  E  *  L  F  P  I  L  Q  S  V  L  S  A  E  N  S  L  T  V  L  F  V  H  R  T  P  N  E  R  Q  S  G  C  N  I  V  F  M  I  L  I  D  G  S  F  L  L  V  S  L  H  E  H  I   </second_frame>
            <third_frame>   S  K  Q  Q  T  P  I  I  R  R  P  Q  N  V  T  *  L  C  L  A  C  L  S  L  S  S  Y  L  L  V  D  C  E  V  P  N  C  L  S  Q  I  S  L  R  R  *  T  V  K  P  P  S  N  N  V  L  V  C  S  I  Y  C  Q  H  S  Q  T  *  R  R  R  R  *  Q  R  R  R  R  V  K  Q  S  R  S  L  Y  W  Q  T  Y  Y  G  E  A  T  E  R  *  G  *  F  I  A  S  I  T  V  T  R  R  *  G  *  L  L  R  A  H  *  N  P  N  P  S  V  L  G  S  G  L  F  P  G  P  T  V  P  I  R  A  R  Q  I  F  T  G  S  D  F  R  T  S  S  R  F  G  *  R  G  V  R  F  C  G  D  R  G  F  A  E  *  Y  C  *  N  W  G  E  I  Q  E  W  D  I  *  A  F  E  E  Y  S  R  V  G  N  H  Q  N  G  V  Q  L  T  A  T  G  T  G  G  G  R  R  *  E  V  *  F  R  *  R  C  S  W  C  Y  *  G  S  S  G  F  C  E  G  H  C  Y  A  S  *  D  M  V  G  F  P  F  V  R  G  *  R  *  R  S :   R  F  *  L  V  *  C  T  T  R  A  C  I  S  C  *  A  F  C  S  K  T  G  C  F  E  D  *  A  L  P  R  L  H  E  *  G  S  L  L  G  D  L  L  C  S  S  A  P  *  T  E  *  T  R  C  *  T  S  I  H  T  P   : G  I  Q  C  Q  G  L  I  I  A  R  V  T  K  T  N  Q  A  N  R  R  R  L  V  K  G  G  D  F  *  I  N  *  R  G  W  F  S  T  *  G  D  A  Y  C  P  F  C  S  A  L  R  G  C  G  S  R  H  V  *  C  G  C  F  L  F  I  C  S  G  R  L  W  Y  R  C  A  P  C  H  *  *  K  S  N  S  *  *  T  C  G  *  R  R  T  Y  Y  P  K  Q  R  *  K  I  A  I  C  I  S  D  *  V  R  G  E  *  R  R  G  C  *  *  L  V  E  G  R  K  H  G  N  Y  R  Y  Q  *  N  H  H  V  F  *  G  *  *  G  C  V  F  Q  *  S  *  R  G  *  F  R  Y  A  C  K  I  K  K  R  S  L  Q  L  *  *  G  L  T  R  L  G  P  V  E  E  K  L  H  R  L  V  *  R  F  Q  L  H  Q  S  D  *  F  C  *  G  K  S  *  *  Q  R  I  K  *  L  A  G  Y  *  *  P  *  G  G  V  N  L  C  K  I  *  I  *  L  L  F  R  S  F  L  V  N  S  Y  S  P  S  S  S  P  Y  S  P  L  R  T  P  *  L  Y  C  L  Y  I  E  R  L  M  K  D  N  R  V  V  I  *  C  S  *  Y  *  L  M  V  A  S  C  L  C  H  Y  M  S  I  Y  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0030E13.1" strand="+"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="99525" stop="100143"/>
                    <exon start="101124" stop="101314"/>
                    <exon start="102689" stop="103354"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1473</number_coding_nucleotides>
                  <number_encoded_amino_acids>491</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NLHLTMSWFARSIASTLRLEDDDDDRDDAVSSNHDHSTGKPTTEKQQKDEDDSLPVSPSRGVKDDFSELTKTLTRQFWGVASFLAPPSQSEPDKSLLDPTSEPARDSDDEESDSAGIAGLRSDIAEIGGRFKSGISKLSKNIPVSEITKMASNLLQLGPEEEEDKRFDSGRGAVGVTEEVVAFVRDIAMHPETWLDFPLFEDEDDEVDFDLSDAQQEHALAVERFAPRLAALRIELCPGYMNEARFWEIYFVLLHPRLNKQDAELLSTPQVFNARASLSQELQKRTKPIEGDWSKEETFKSTDGGGSQHEEMLTVPSAPLSADAVQDMSSVDVSSLSVVVGSGTDVHPVISENQTVDRLVAEEGPITLSKDEKLQSASATKLEESDEEDADDWLKEENTEITGTSKTTMSFEDDEDVSFSDLEEDDSDMPAKSKNAAYSSDKDSQDWVQLRKSSTDLSRDSSSINQISSVKENPDSKESNDWLDIDDLEVA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="16" PGL_strand="-" PGL_start="107248" PGL_stop="103701"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="107248" e_stop="107146"/>
            <exon e_start="106798" e_stop="106712"/>
            <exon e_start="106522" e_stop="106477"/>
            <exon e_start="105792" e_stop="105678"/>
            <exon e_start="105524" e_stop="105457"/>
            <exon e_start="105287" e_stop="104631"/>
            <exon e_start="104498" e_stop="104394"/>
            <exon e_start="104272" e_stop="103701"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.996" acc_prob="0.908" e_score="0.835"/>
          <exon-intron don_prob="0.999" acc_prob="0.947" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.972" acc_prob="0.984" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.944" e_score="1.000"/>
          <exon-intron don_prob="0.988" acc_prob="0.995" e_score="1.000"/>
          <exon-only e_score="0.956"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.835">
            <gDNA_exon_boundary e_start="107248" e_stop="107146" e_length="103"/>
          </exon>
          <intron i_serial="1" don_prob="0.996" acc_prob="0.908">
            <gDNA_intron_boundary i_start="107145" i_stop="106799" i_length="347"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="106798" e_stop="106712" e_length="87"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.947">
            <gDNA_intron_boundary i_start="106711" i_stop="106523" i_length="189"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="106522" e_stop="106477" e_length="46"/>
          </exon>
          <intron i_serial="3" don_prob="0.996" acc_prob="0.999">
            <gDNA_intron_boundary i_start="106476" i_stop="105793" i_length="684"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="105792" e_stop="105678" e_length="115"/>
          </exon>
          <intron i_serial="4" don_prob="0.972" acc_prob="0.984">
            <gDNA_intron_boundary i_start="105677" i_stop="105525" i_length="153"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="105524" e_stop="105457" e_length="68"/>
          </exon>
          <intron i_serial="5" don_prob="0.999" acc_prob="0.999">
            <gDNA_intron_boundary i_start="105456" i_stop="105288" i_length="169"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="105287" e_stop="104631" e_length="657"/>
          </exon>
          <intron i_serial="6" don_prob="0.999" acc_prob="0.944">
            <gDNA_intron_boundary i_start="104630" i_stop="104499" i_length="132"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="104498" e_stop="104394" e_length="105"/>
          </exon>
          <intron i_serial="7" don_prob="0.988" acc_prob="0.995">
            <gDNA_intron_boundary i_start="104393" i_stop="104273" i_length="121"/>
          </intron>
          <exon e_serial="8" e_score="0.956">
            <gDNA_exon_boundary e_start="104272" e_stop="103701" e_length="572"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="107248" stop="107146"/>
              <exon start="106798" stop="106712"/>
              <exon start="106522" stop="106477"/>
              <exon start="105792" stop="105678"/>
              <exon start="105524" stop="105457"/>
              <exon start="105287" stop="104631"/>
              <exon start="104498" stop="104394"/>
              <exon start="104272" stop="103701"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U569674" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="16" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GTCTCCTAATCTCCCTTTATATATATATATATATATATATATCTGTTTTCTTTCATCAAAATCTGAATTTTACATTCAAATTTCAAGATTCCACCTTTCTCAG : AAAGCAAAAGCAAATGGAGATTTCTGTTTACAAACCCTATGGTGATCATGAATTTCAATCACTAATTGAAAGAATTCACCCTCCCAG : GGTGTGCATTGATAATGATACTTGCCGAAACTGTACTATTGTGAAG : GTTGATAGTGCGAACAAACATGGTATATTGCTGGAGATGGTCCAAGTTCTGACGGATCTGGACCTACTGATTCTAAGATCATACATATCCTCTGATGGTGGCTGGTTAATGGATG : TTTTCCACGTAACTGACCAACTTGGGAACAAAATCACTGACGAAAGCCTCATCCACTACATCGAACAG : GCTATTTGTGCAAGTAGAAGAGGGTCCAGGGAAGTCCAAACATGTGTTGGTAGAAATGTAAGGCCCAGGCATGTCTCAATGGAGCACACAGCTATGGAGATGACAGCAATAGATAGACCAGGGTTAATGTCCGAGATATCTGCTGTGCTGGCTGAGTTAGGATGCCATGTCTCTGGTGCCGTGGCATGGACACATAACAAGCGAGCAGCCTGCATTGTTTACATGGAAGATGATCTGAAGCATGGGCCAATCATGGACCCCTATAGAGTGGCACAAATACAGGCCCAGCTGGAGAATGTTGTTGAGGCCCACCATTATGAAGGGGAGCGACGGAGTGTGAGGTTGGCAGCCCCTGCAGCTAGCCAGACCCATACCGAAAGACGGCTTCATCAGTTGATGGCTGCTGACAGGGACTACGAACAATGTTGTTCCTGTGGTTATGACTCAAGTGGAGATGATGTAGCTCACAGGCAGAAGAAGGGATCTAATAGCACAGAAGTGAAGATAGAAAATTGCAAGGAGAGGGGCTACTCCATTGTTACTGTGAGGAGTATGGACAGACCCAAATTGCTATTTGACACTATCTGCACCTTGACAGACTTGCAATATGTCGTGTTCCATGCATCCATCAATTCTTTTGAATCCATTGCCATTCAG : GAATACTATGTGAGACACAAGAATGGATGGACTTTAGATTCAGAAAGTGAAAGACGGAAAATGATCCAAAATCTGATGGCTGCTACTGAGAGGAGAGTATCTCAT : GAATTGAGACTGGATGTTACTACTCAAAACAGGGTAGGACTGTTAGCAGATGTCACAAGAGTGTTTCGGGAGAACGGATTATCCATAAGCAGGACTGAGGTTGGGGTACAGGGAGAGCAAGCAGTTGGCACATTCTATGTAAAAGATACTTCAGGGCAAGATGTGACTTCAGAAACCTTGGAGGTAGTAAGACGAGAAATTGGAGGTACCGTCCTGGTGGCAAATAAATCCTCAGGGAGGCCATCTTCTCAACCAACAGATTTGTCAAATACAAGCCCTAGCAGTAGCAGTGGCAAGCAAGACAAGAAGCCTGGTTTCTCATTAGGAAGCATGTTCTGGTCTCAGCTTGAGTGGCTTTCCAGCAATTTCAGACCTATAAAATCCTAAGTGCTGATCTTGAAGACCCTACTGTGTTTAGGCCATGTTGATTGTAAATATTTAGCAACTTCCTTCTGTAAATAATTAGCAACCTCCGTCTGTAAATAATTAGCAACAGTGGTAAATAATGATAGACGCATGGTACAATGTACATTATCTTTGCAGAGTAAAACCATTGGAAGTTCCAAAATTAA</gDNA_template>
            <first_frame> V  S  *  S  P  F  I  Y  I  Y  I  Y  I  Y  L  F  S  F  I  K  I  *  I  L  H  S  N  F  K  I  P  P  F  S   : E  S  K  S  K  W  R  F  L  F  T  N  P  M  V  I  M  N  F  N  H  *  L  K  E  F  T  L  P   : G  C  A  L  I  M  I  L  A  E  T  V  L  L  *  R :   L  I  V  R  T  N  M  V  Y  C  W  R  W  S  K  F  *  R  I  W  T  Y  *  F  *  D  H  T  Y  P  L  M  V  A  G  *  W  M  :  F  S  T  *  L  T  N  L  G  T  K  S  L  T  K  A  S  S  T  T  S  N  R :   L  F  V  Q  V  E  E  G  P  G  K  S  K  H  V  L  V  E  M  *  G  P  G  M  S  Q  W  S  T  Q  L  W  R  *  Q  Q  *  I  D  Q  G  *  C  P  R  Y  L  L  C  W  L  S  *  D  A  M  S  L  V  P  W  H  G  H  I  T  S  E  Q  P  A  L  F  T  W  K  M  I  *  S  M  G  Q  S  W  T  P  I  E  W  H  K  Y  R  P  S  W  R  M  L  L  R  P  T  I  M  K  G  S  D  G  V  *  G  W  Q  P  L  Q  L  A  R  P  I  P  K  D  G  F  I  S  *  W  L  L  T  G  T  T  N  N  V  V  P  V  V  M  T  Q  V  E  M  M  *  L  T  G  R  R  R  D  L  I  A  Q  K  *  R  *  K  I  A  R  R  G  A  T  P  L  L  L  *  G  V  W  T  D  P  N  C  Y  L  T  L  S  A  P  *  Q  T  C  N  M  S  C  S  M  H  P  S  I  L  L  N  P  L  P  F  R :   N  T  M  *  D  T  R  M  D  G  L  *  I  Q  K  V  K  D  G  K  *  S  K  I  *  W  L  L  L  R  G  E  Y  L  M :   N  *  D  W  M  L  L  L  K  T  G  *  D  C  *  Q  M  S  Q  E  C  F  G  R  T  D  Y  P  *  A  G  L  R  L  G  Y  R  E  S  K  Q  L  A  H  S  M  *  K  I  L  Q  G  K  M  *  L  Q  K  P  W  R  *  *  D  E  K  L  E  V  P  S  W  W  Q  I  N  P  Q  G  G  H  L  L  N  Q  Q  I  C  Q  I  Q  A  L  A  V  A  V  A  S  K  T  R  S  L  V  S  H  *  E  A  C  S  G  L  S  L  S  G  F  P  A  I  S  D  L  *  N  P  K  C  *  S  *  R  P  Y  C  V  *  A  M  L  I  V  N  I  *  Q  L  P  S  V  N  N  *  Q  P  P  S  V  N  N  *  Q  Q  W  *  I  M  I  D  A  W  Y  N  V  H  Y  L  C  R  V  K  P  L  E  V  P  K  L  </first_frame>
            <second_frame>  S  P  N  L  P  L  Y  I  Y  I  Y  I  Y  I  C  F  L  S  S  K  S  E  F  Y  I  Q  I  S  R  F  H  L  S  Q  :  K  A  K  A  N  G  D  F  C  L  Q  T  L  W  *  S  *  I  S  I  T  N  *  K  N  S  P  S  Q  :  G  V  H  *  *  *  Y  L  P  K  L  Y  Y  C  E   : G  *  *  C  E  Q  T  W  Y  I  A  G  D  G  P  S  S  D  G  S  G  P  T  D  S  K  I  I  H  I  L  *  W  W  L  V  N  G  C :   F  P  R  N  *  P  T  W  E  Q  N  H  *  R  K  P  H  P  L  H  R  T   : G  Y  L  C  K  *  K  R  V  Q  G  S  P  N  M  C  W  *  K  C  K  A  Q  A  C  L  N  G  A  H  S  Y  G  D  D  S  N  R  *  T  R  V  N  V  R  D  I  C  C  A  G  *  V  R  M  P  C  L  W  C  R  G  M  D  T  *  Q  A  S  S  L  H  C  L  H  G  R  *  S  E  A  W  A  N  H  G  P  L  *  S  G  T  N  T  G  P  A  G  E  C  C  *  G  P  P  L  *  R  G  A  T  E  C  E  V  G  S  P  C  S  *  P  D  P  Y  R  K  T  A  S  S  V  D  G  C  *  Q  G  L  R  T  M  L  F  L  W  L  *  L  K  W  R  *  C  S  S  Q  A  E  E  G  I  *  *  H  R  S  E  D  R  K  L  Q  G  E  G  L  L  H  C  Y  C  E  E  Y  G  Q  T  Q  I  A  I  *  H  Y  L  H  L  D  R  L  A  I  C  R  V  P  C  I  H  Q  F  F  *  I  H  C  H  S   : G  I  L  C  E  T  Q  E  W  M  D  F  R  F  R  K  *  K  T  E  N  D  P  K  S  D  G  C  Y  *  E  E  S  I  S   : *  I  E  T  G  C  Y  Y  S  K  Q  G  R  T  V  S  R  C  H  K  S  V  S  G  E  R  I  I  H  K  Q  D  *  G  W  G  T  G  R  A  S  S  W  H  I  L  C  K  R  Y  F  R  A  R  C  D  F  R  N  L  G  G  S  K  T  R  N  W  R  Y  R  P  G  G  K  *  I  L  R  E  A  I  F  S  T  N  R  F  V  K  Y  K  P  *  Q  *  Q  W  Q  A  R  Q  E  A  W  F  L  I  R  K  H  V  L  V  S  A  *  V  A  F  Q  Q  F  Q  T  Y  K  I  L  S  A  D  L  E  D  P  T  V  F  R  P  C  *  L  *  I  F  S  N  F  L  L  *  I  I  S  N  L  R  L  *  I  I  S  N  S  G  K  *  *  *  T  H  G  T  M  Y  I  I  F  A  E  *  N  H  W  K  F  Q  N  * </second_frame>
            <third_frame>   L  L  I  S  L  Y  I  Y  I  Y  I  Y  I  S  V  F  F  H  Q  N  L  N  F  T  F  K  F  Q  D  S  T  F  L  R :   K  Q  K  Q  M  E  I  S  V  Y  K  P  Y  G  D  H  E  F  Q  S  L  I  E  R  I  H  P  P  R :   V  C  I  D  N  D  T  C  R  N  C  T  I  V  K  :  V  D  S  A  N  K  H  G  I  L  L  E  M  V  Q  V  L  T  D  L  D  L  L  I  L  R  S  Y  I  S  S  D  G  G  W  L  M  D   : V  F  H  V  T  D  Q  L  G  N  K  I  T  D  E  S  L  I  H  Y  I  E  Q  :  A  I  C  A  S  R  R  G  S  R  E  V  Q  T  C  V  G  R  N  V  R  P  R  H  V  S  M  E  H  T  A  M  E  M  T  A  I  D  R  P  G  L  M  S  E  I  S  A  V  L  A  E  L  G  C  H  V  S  G  A  V  A  W  T  H  N  K  R  A  A  C  I  V  Y  M  E  D  D  L  K  H  G  P  I  M  D  P  Y  R  V  A  Q  I  Q  A  Q  L  E  N  V  V  E  A  H  H  Y  E  G  E  R  R  S  V  R  L  A  A  P  A  A  S  Q  T  H  T  E  R  R  L  H  Q  L  M  A  A  D  R  D  Y  E  Q  C  C  S  C  G  Y  D  S  S  G  D  D  V  A  H  R  Q  K  K  G  S  N  S  T  E  V  K  I  E  N  C  K  E  R  G  Y  S  I  V  T  V  R  S  M  D  R  P  K  L  L  F  D  T  I  C  T  L  T  D  L  Q  Y  V  V  F  H  A  S  I  N  S  F  E  S  I  A  I  Q  :  E  Y  Y  V  R  H  K  N  G  W  T  L  D  S  E  S  E  R  R  K  M  I  Q  N  L  M  A  A  T  E  R  R  V  S  H  :  E  L  R  L  D  V  T  T  Q  N  R  V  G  L  L  A  D  V  T  R  V  F  R  E  N  G  L  S  I  S  R  T  E  V  G  V  Q  G  E  Q  A  V  G  T  F  Y  V  K  D  T  S  G  Q  D  V  T  S  E  T  L  E  V  V  R  R  E  I  G  G  T  V  L  V  A  N  K  S  S  G  R  P  S  S  Q  P  T  D  L  S  N  T  S  P  S  S  S  S  G  K  Q  D  K  K  P  G  F  S  L  G  S  M  F  W  S  Q  L  E  W  L  S  S  N  F  R  P  I  K  S  *  V  L  I  L  K  T  L  L  C  L  G  H  V  D  C  K  Y  L  A  T  S  F  C  K  *  L  A  T  S  V  C  K  *  L  A  T  V  V  N  N  D  R  R  M  V  Q  C  T  L  S  L  Q  S  K  T  I  G  S  S  K  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0030E13.1" strand="-"/>
                <serials PGL_serial="16" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="107246" stop="107146"/>
                    <exon start="106798" stop="106712"/>
                    <exon start="106522" stop="106477"/>
                    <exon start="105792" stop="105678"/>
                    <exon start="105524" stop="105457"/>
                    <exon start="105287" stop="104631"/>
                    <exon start="104498" stop="104394"/>
                    <exon start="104272" stop="103886"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1563</number_coding_nucleotides>
                  <number_encoded_amino_acids>521</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LLISLYIYIYIYISVFFHQNLNFTFKFQDSTFLRKQKQMEISVYKPYGDHEFQSLIERIHPPRVCIDNDTCRNCTIVKVDSANKHGILLEMVQVLTDLDLLILRSYISSDGGWLMDVFHVTDQLGNKITDESLIHYIEQAICASRRGSREVQTCVGRNVRPRHVSMEHTAMEMTAIDRPGLMSEISAVLAELGCHVSGAVAWTHNKRAACIVYMEDDLKHGPIMDPYRVAQIQAQLENVVEAHHYEGERRSVRLAAPAASQTHTERRLHQLMAADRDYEQCCSCGYDSSGDDVAHRQKKGSNSTEVKIENCKERGYSIVTVRSMDRPKLLFDTICTLTDLQYVVFHASINSFESIAIQEYYVRHKNGWTLDSESERRKMIQNLMAATERRVSHELRLDVTTQNRVGLLADVTRVFRENGLSISRTEVGVQGEQAVGTFYVKDTSGQDVTSETLEVVRREIGGTVLVANKSSGRPSSQPTDLSNTSPSSSSGKQDKKPGFSLGSMFWSQLEWLSSNFRPIKS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 57 chains have been computed
$ 
$ memory statistics:
$ 53016 bytes spliced alignments in total
$ 25 spliced alignments have been stored
$ 2120 bytes was the average size of a spliced alignment
$ 25080 bytes predicted gene locations in total
$ 16 predicted gene locations have been stored
$ 1567 bytes was the average size of a predicted gene location
$ 2 megabytes was the average size of the backtrace matrix
$ 65 backtrace matrices have been allocated
$ 
$ date finished: 2009-12-01 08:22:48
-->
