<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-12-01 08:42:33"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E272288" ref_strand="+" ref_description="SGN-E272288 [cLEM-19-J19]">
      <seq>tgaagtcccaatgcgatgatctaaaaaagcaactggattccttgagaagtgcatcagaacccagtaaggatgaagttaatagattgaaggaactcaagaaaatcatttcggctgaagaaaaagaaatggacaggcttacacagggttcaaaacagctgaaagagaaggcttcagaacttcaaaataaaatagagaatgcaggtggcgagcaattgaaaaatcagaaggcaaaggttactaaaatacaatctgatattgataaaaagagcacagagatcaaccgtcgtaaggttcagattgaaacaggacagaaaatgattaaaaaactgacaaaggggattgaggaatcaaacaaagagaaggaaaatcttcttgctgagaaggagaagttactttccatcttcaaagaggtcgaacagaaagcttttactgttcaagaggactataaaaagatacaggagctcattgatcagcacaaaggtattctgattgatgctaaaaatgaatatgaaaatttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="+" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="2222" stop="3640"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="2522" g_stop="2688" g_length="167"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="167" r_length="167" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="2689" i_stop="2797" i_length="109">
            <donor d_prob="0.966" d_score="1.00"/>
            <acceptor a_prob="0.413" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="2798" g_stop="2881" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="168" r_stop="251" r_length="84" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="2882" i_stop="2958" i_length="77">
            <donor d_prob="0.821" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="2959" g_stop="3168" g_length="210"/>
          <reference_exon_boundary r_type="cDNA" r_start="252" r_stop="461" r_length="210" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="3169" i_stop="3283" i_length="115">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="3284" g_stop="3340" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="462" r_stop="518" r_length="57" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="+" ref_id="SGN-E272288" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>518</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E272288" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="2522" e_stop="2688"/>
          <exon e_start="2798" e_stop="2881"/>
          <exon e_start="2959" e_stop="3168"/>
          <exon e_start="3284" e_stop="3340"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAAGTCCCAATGCGATGATCTAAAAAAGCAACTGGATTCCTTGAGAAGTGCATCAGAACCCAGTAAGGATGAAGTTAATAGATTGAAGGAACTCAAGAAAATCATTTCGGCTGAAGAAAAAGAAATGGACAGGCTTACACAGGGTTCAAAACAGCTGAAAGAGAAGGTGATCACATGTCTAGCAGTTTATCCTTTTCTTAAGACCATTTTATTATTAAGTTCAAGAGAAGCTAGCTCCAAAGGCTGTTTCAAAATCCAGTGTTTTATGTCTTCAGGCTTCAGAACTTCAAAATAAAATAGAGAATGCAGGTGGCGAGCAATTGAAAAATCAGAAGGCAAAGGTTACTAAAATACAATCTGTAAGTGGAAAACTGACGCTTGTGCATGCTAAGTTTATGTGCTTTACTGTTAACACACTTTTTTTGCTCCACCGTAGGATATTGATAAAAAGAGCACAGAGATCAACCGTCGTAAGGTTCAGATTGAAACAGGACAGAAAATGATTAAAAAACTGACAAAGGGGATTGAGGAATCAAACAAAGAGAAGGAAAATCTTCTTGCTGAGAAGGAGAAGTTACTTTCCATCTTCAAAGAGGTCGAACAGAAAGCTTTTACTGTTCAAGAGGACTATAAAAAGATACAGGAGGTTTGTACCATTATTTCATGTTAAGATGTGCATCATATGATTGTGCAAGTTGCTTCAATTGTTTCGGCAAATTTCTTTTTTTTTTTCTAATGTTTTTGTGTTAATGATTTTTTAGCTCATTGATCAGCACAAAGGTATTCTGATTGATGCTAAAAATGAATATGAAAATTTG</genome_strand>
        <mrna_strand>TGAAGTCCCAATGCGATGATCTAAAAAAGCAACTGGATTCCTTGAGAAGTGCATCAGAACCCAGTAAGGATGAAGTTAATAGATTGAAGGAACTCAAGAAAATCATTTCGGCTGAAGAAAAAGAAATGGACAGGCTTACACAGGGTTCAAAACAGCTGAAAGAGAAG.............................................................................................................GCTTCAGAACTTCAAAATAAAATAGAGAATGCAGGTGGCGAGCAATTGAAAAATCAGAAGGCAAAGGTTACTAAAATACAATCT.............................................................................GATATTGATAAAAAGAGCACAGAGATCAACCGTCGTAAGGTTCAGATTGAAACAGGACAGAAAATGATTAAAAAACTGACAAAGGGGATTGAGGAATCAAACAAAGAGAAGGAAAATCTTCTTGCTGAGAAGGAGAAGTTACTTTCCATCTTCAAAGAGGTCGAACAGAAAGCTTTTACTGTTCAAGAGGACTATAAAAAGATACAGGAG...................................................................................................................CTCATTGATCAGCACAAAGGTATTCTGATTGATGCTAAAAATGAATATGAAAATTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E403411" ref_strand="+" ref_description="SGN-E403411 [PPC-10-F7]">
      <seq>gaagtgcatcagaacctagtaaggatgaagttaatagattgaaggaactcaagaaaataatttcttctgaagaaaaagaaatggacaggcttacacaaggttcaaaacagctgaaagagaaggcttcagaacttcagaataaaatggagaatgcaggtggcgagcgattgaaaaatcaaaaggcaaaggttactaaaatacaatctgatatcgataaaaagagcacagagatcaaccgtcgtaaggttcagattgaaacaggacagaaaatgattaaaaaactgacaaaggggattgaggaatcaaacaaagagaaggaaagtctacttgctgagaaggagaagttactttccatcttcaaagaggtcgaacagaaagcttttactgttcaggaggactataaaaagatacaggagctcattgatcagcacaaagatgctctgaatggtgctaaaaatgaatatgaaaatttgaagaagactatggatgagatgcggtcatcagaggtagatgcggactacaagttacaagatatgaagaaggtttataaagacttggaactcaaagggaaaggatataagaaaaaactcgatgatttgcatactgctctgtcaaagcatattgagcaaattcaaagagacttggtggacccggaaaagcttcaggcaactctaagtgacgaaactcttggtcagacttgtgatcttaagacagctcttgagacagtttcacttctagaggctncactgaaagagatgaacccaaatcttgnactcatttctgagtatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="+" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="2267" stop="4172"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="2567" g_stop="2688" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="122" r_length="122" r_score="0.959"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="2689" i_stop="2797" i_length="109">
            <donor d_prob="0.966" d_score="0.98"/>
            <acceptor a_prob="0.413" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="2798" g_stop="2881" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="123" r_stop="206" r_length="84" r_score="0.952"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="2882" i_stop="2958" i_length="77">
            <donor d_prob="0.821" d_score="0.96"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="2959" g_stop="3168" g_length="210"/>
          <reference_exon_boundary r_type="cDNA" r_start="207" r_stop="416" r_length="210" r_score="0.981"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="3169" i_stop="3283" i_length="115">
            <donor d_prob="0.991" d_score="0.98"/>
            <acceptor a_prob="0.994" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="3284" g_stop="3373" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="417" r_stop="506" r_length="90" r_score="0.944"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="3374" i_stop="3446" i_length="73">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.786" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="3447" g_stop="3568" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="507" r_stop="628" r_length="122" r_score="0.951"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="3569" i_stop="3713" i_length="145">
            <donor d_prob="0.607" d_score="0.96"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="3714" g_stop="3869" g_length="156"/>
          <reference_exon_boundary r_type="cDNA" r_start="629" r_stop="784" r_length="156" r_score="0.923"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="3870" i_stop="3955" i_length="86">
            <donor d_prob="0.985" d_score="0.86"/>
            <acceptor a_prob="0.851" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="3956" g_stop="3960" g_length="5"/>
          <reference_exon_boundary r_type="cDNA" r_start="785" r_stop="789" r_length="5" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="+" ref_id="SGN-E403411" ref_strand="+">
        <total_alignment_score>0.954</total_alignment_score>
        <cumulative_length_of_scored_exons>789</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E403411" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="2567" e_stop="2688"/>
          <exon e_start="2798" e_stop="2881"/>
          <exon e_start="2959" e_stop="3168"/>
          <exon e_start="3284" e_stop="3373"/>
          <exon e_start="3447" e_stop="3568"/>
          <exon e_start="3714" e_stop="3869"/>
          <exon e_start="3956" e_stop="3960"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGTGCATCAGAACCCAGTAAGGATGAAGTTAATAGATTGAAGGAACTCAAGAAAATCATTTCGGCTGAAGAAAAAGAAATGGACAGGCTTACACAGGGTTCAAAACAGCTGAAAGAGAAGGTGATCACATGTCTAGCAGTTTATCCTTTTCTTAAGACCATTTTATTATTAAGTTCAAGAGAAGCTAGCTCCAAAGGCTGTTTCAAAATCCAGTGTTTTATGTCTTCAGGCTTCAGAACTTCAAAATAAAATAGAGAATGCAGGTGGCGAGCAATTGAAAAATCAGAAGGCAAAGGTTACTAAAATACAATCTGTAAGTGGAAAACTGACGCTTGTGCATGCTAAGTTTATGTGCTTTACTGTTAACACACTTTTTTTGCTCCACCGTAGGATATTGATAAAAAGAGCACAGAGATCAACCGTCGTAAGGTTCAGATTGAAACAGGACAGAAAATGATTAAAAAACTGACAAAGGGGATTGAGGAATCAAACAAAGAGAAGGAAAATCTTCTTGCTGAGAAGGAGAAGTTACTTTCCATCTTCAAAGAGGTCGAACAGAAAGCTTTTACTGTTCAAGAGGACTATAAAAAGATACAGGAGGTTTGTACCATTATTTCATGTTAAGATGTGCATCATATGATTGTGCAAGTTGCTTCAATTGTTTCGGCAAATTTCTTTTTTTTTTTCTAATGTTTTTGTGTTAATGATTTTTTAGCTCATTGATCAGCACAAAGGTATTCTGATTGATGCTAAAAATGAATATGAAAATTTGAAGAAGACTATGGATGAGATGCGGTCATCAGAGGTTCTATGGCACTCATTTGACATTTTTTCTTCCTTCCATTTATATATGTAATCTAATGCAAGTGGAGCTGCAGGTAGATGCTGAATACAAGTTACAAGATATGAAGAAGGTTTATAAAGATTTGGAACTCAAAGGGAAAGGATACAAGAAAAAACTCGATGATTTGCATACTGCTTTGTCGAAGCATATTGAGCAGTAAGTCCTGGAGATTTCTTTCTGAGGCAAAACACATCATCACATTGTCAGCTTCCAATCTCTTTCTGATACACACAGACCCCCTCATCTGTTATCTTTCTTTTTGTTTGTAATAATTGTCTTGCATTTCTTTATCTGTGTATAGAATTCAAAAAGACTTGGTGGACCCGGAAAAGCTTCAGGCAACTCTAAGTGATGTTACTCTTGGTCAAACTTGTGATCTTAAGACAGCTCTTGAGACAGTTTCACTTCTAGAGTCTCAACTCAAAGAGATGAACCCAAATCTTG-ACTCGATTTCTGAGTAAGCTCTTGTACTCATTTATAGAGAAGCTTGTAGCATGACTATGTTTCTTGATATTAATTGCTAATAGTCTCTACTGTCACTAGGTATC</genome_strand>
        <mrna_strand>GAAGTGCATCAGAACCTAGTAAGGATGAAGTTAATAGATTGAAGGAACTCAAGAAAATAATTTCTTCTGAAGAAAAAGAAATGGACAGGCTTACACAAGGTTCAAAACAGCTGAAAGAGAAG.............................................................................................................GCTTCAGAACTTCAGAATAAAATGGAGAATGCAGGTGGCGAGCGATTGAAAAATCAAAAGGCAAAGGTTACTAAAATACAATCT.............................................................................GATATCGATAAAAAGAGCACAGAGATCAACCGTCGTAAGGTTCAGATTGAAACAGGACAGAAAATGATTAAAAAACTGACAAAGGGGATTGAGGAATCAAACAAAGAGAAGGAAAGTCTACTTGCTGAGAAGGAGAAGTTACTTTCCATCTTCAAAGAGGTCGAACAGAAAGCTTTTACTGTTCAGGAGGACTATAAAAAGATACAGGAG...................................................................................................................CTCATTGATCAGCACAAAGATGCTCTGAATGGTGCTAAAAATGAATATGAAAATTTGAAGAAGACTATGGATGAGATGCGGTCATCAGAG.........................................................................GTAGATGCGGACTACAAGTTACAAGATATGAAGAAGGTTTATAAAGACTTGGAACTCAAAGGGAAAGGATATAAGAAAAAACTCGATGATTTGCATACTGCTCTGTCAAAGCATATTGAGCA.................................................................................................................................................AATTCAAAGAGACTTGGTGGACCCGGAAAAGCTTCAGGCAACTCTAAGTGACGAAACTCTTGGTCAGACTTGTGATCTTAAGACAGCTCTTGAGACAGTTTCACTTCTAGAGGCTNCACTGAAAGAGATGAACCCAAATCTTGNACTC-ATTTCTGA......................................................................................GTATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E433389" ref_strand="+" ref_description="SGN-E433389 [STM-58-M6]">
      <seq>gaagtgcatcagaacctagtaaggatgaagttaatagattgaaggaactcaagaaaataatttcttctgaagaaaaagaaatggacaggcttacacaaggttcaaaacagctgaaagagaaggcttcagaacttcagaataaaatggagaatgcaggtggcgagcgattgaaaaatcaaaaggcaaaggttactaaaatacaatctgatatcgataaaaagagcacagagatcaaccgtcgtaaggttcagattgaaacaggacagaaaatgattaaaaaactgacaaaggggattgaggaatcaaacaaagagaaggaaagtctacttgctgagaaggagaagttactttccatcttcaaagaggtcgaacagaaagcttttactgttcaggaggactataaaaagatacaggagctcattgatcagcacaaagatgctctgaatggtgctaaaaatgaatatgaaaatttgaagaagactatggatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="+" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="2267" stop="3656"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="2567" g_stop="2688" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="122" r_length="122" r_score="0.959"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="2689" i_stop="2797" i_length="109">
            <donor d_prob="0.966" d_score="0.98"/>
            <acceptor a_prob="0.413" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="2798" g_stop="2881" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="123" r_stop="206" r_length="84" r_score="0.952"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="2882" i_stop="2958" i_length="77">
            <donor d_prob="0.821" d_score="0.96"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="2959" g_stop="3168" g_length="210"/>
          <reference_exon_boundary r_type="cDNA" r_start="207" r_stop="416" r_length="210" r_score="0.981"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="3169" i_stop="3283" i_length="115">
            <donor d_prob="0.991" d_score="0.98"/>
            <acceptor a_prob="0.994" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="3284" g_stop="3356" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="417" r_stop="489" r_length="73" r_score="0.932"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="+" ref_id="SGN-E433389" ref_strand="+">
        <total_alignment_score>0.963</total_alignment_score>
        <cumulative_length_of_scored_exons>489</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E433389" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="2567" e_stop="2688"/>
          <exon e_start="2798" e_stop="2881"/>
          <exon e_start="2959" e_stop="3168"/>
          <exon e_start="3284" e_stop="3356"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGTGCATCAGAACCCAGTAAGGATGAAGTTAATAGATTGAAGGAACTCAAGAAAATCATTTCGGCTGAAGAAAAAGAAATGGACAGGCTTACACAGGGTTCAAAACAGCTGAAAGAGAAGGTGATCACATGTCTAGCAGTTTATCCTTTTCTTAAGACCATTTTATTATTAAGTTCAAGAGAAGCTAGCTCCAAAGGCTGTTTCAAAATCCAGTGTTTTATGTCTTCAGGCTTCAGAACTTCAAAATAAAATAGAGAATGCAGGTGGCGAGCAATTGAAAAATCAGAAGGCAAAGGTTACTAAAATACAATCTGTAAGTGGAAAACTGACGCTTGTGCATGCTAAGTTTATGTGCTTTACTGTTAACACACTTTTTTTGCTCCACCGTAGGATATTGATAAAAAGAGCACAGAGATCAACCGTCGTAAGGTTCAGATTGAAACAGGACAGAAAATGATTAAAAAACTGACAAAGGGGATTGAGGAATCAAACAAAGAGAAGGAAAATCTTCTTGCTGAGAAGGAGAAGTTACTTTCCATCTTCAAAGAGGTCGAACAGAAAGCTTTTACTGTTCAAGAGGACTATAAAAAGATACAGGAGGTTTGTACCATTATTTCATGTTAAGATGTGCATCATATGATTGTGCAAGTTGCTTCAATTGTTTCGGCAAATTTCTTTTTTTTTTTCTAATGTTTTTGTGTTAATGATTTTTTAGCTCATTGATCAGCACAAAGGTATTCTGATTGATGCTAAAAATGAATATGAAAATTTGAAGAAGACTATGGATG</genome_strand>
        <mrna_strand>GAAGTGCATCAGAACCTAGTAAGGATGAAGTTAATAGATTGAAGGAACTCAAGAAAATAATTTCTTCTGAAGAAAAAGAAATGGACAGGCTTACACAAGGTTCAAAACAGCTGAAAGAGAAG.............................................................................................................GCTTCAGAACTTCAGAATAAAATGGAGAATGCAGGTGGCGAGCGATTGAAAAATCAAAAGGCAAAGGTTACTAAAATACAATCT.............................................................................GATATCGATAAAAAGAGCACAGAGATCAACCGTCGTAAGGTTCAGATTGAAACAGGACAGAAAATGATTAAAAAACTGACAAAGGGGATTGAGGAATCAAACAAAGAGAAGGAAAGTCTACTTGCTGAGAAGGAGAAGTTACTTTCCATCTTCAAAGAGGTCGAACAGAAAGCTTTTACTGTTCAGGAGGACTATAAAAAGATACAGGAG...................................................................................................................CTCATTGATCAGCACAAAGATGCTCTGAATGGTGCTAAAAATGAATATGAAAATTTGAAGAAGACTATGGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E344195" ref_strand="+" ref_description="SGN-E344195 [cTOF-16-J23]">
      <seq>aaaaaagtatctgtgtacaatgaaagagttcaagagcttaattctgttactttagagcgtgatgatattaaaaaacaatatgatgagtggagaaagagaaggttggatgagttcatggagggctttaataccatatctttgaaacttaaagaaatgtatcagatgatcacccttggaggcgacgcagaactggaattggtggattctcttgatccgttttctgaaggtgttgttttcagtgttagacctccaaagaagagctggaagaatattgctaacttatcaggtggtgaaaagaccctcagctcattggctcttgtttttgcactccaccactataaacccactccactttatgtgatggatgagattgatgctgctttagattttaagaatgtctcgatcgttgggcattatgtgaaggacagaactaaagatgcacagttcataatcataagccttagaaacaatatgtttgagctagcagatcggctagttggtatctacaaaacagataactgcaccaagagcattactatcaatcctggaagctttgtagtttctcaaaaagctgcttgaggctgttccagaatttctgatcactttcttttatcttccctgtgctgacaagaatctggttgattaacaccttaagctaacatggtgagttctgtattttgttggaagtcattgtaatatgtatagttcatctaatgagttacggaatacttacagatatgataaatgaaagtttgtgtttgtagttaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="+" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="3663" stop="66089"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="3963" g_stop="4063" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="101" r_length="101" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="4064" i_stop="4130" i_length="67">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="4131" g_stop="4191" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="102" r_stop="162" r_length="61" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="4192" i_stop="4974" i_length="783">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="4975" g_stop="5109" g_length="135"/>
          <reference_exon_boundary r_type="cDNA" r_start="163" r_stop="297" r_length="135" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="5110" i_stop="5197" i_length="88">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="5198" g_stop="5285" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="298" r_stop="385" r_length="88" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="5286" i_stop="5376" i_length="91">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="5377" g_stop="5449" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="386" r_stop="458" r_length="73" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="5450" i_stop="5532" i_length="83">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="5533" g_stop="5856" g_length="324"/>
          <reference_exon_boundary r_type="cDNA" r_start="459" r_stop="782" r_length="324" r_score="0.963"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="+" ref_id="SGN-E344195" ref_strand="+">
        <total_alignment_score>0.985</total_alignment_score>
        <cumulative_length_of_scored_exons>782</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E344195" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="3963" e_stop="4063"/>
          <exon e_start="4131" e_stop="4191"/>
          <exon e_start="4975" e_stop="5109"/>
          <exon e_start="5198" e_stop="5285"/>
          <exon e_start="5377" e_stop="5449"/>
          <exon e_start="5533" e_stop="5856"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAAAGTATCTGTGTACAATGAAAGAGTTCAAGAGCTTAATTCTGTTACTTTAGAGCGTGATGATATTAAAAAACAATATGATGAGTGGAGAAAGAGAAGGTAAGTTTCGTCCATCCTACAACCTAGATTTCTCTCTTCCATATGCCAGCTCACAACATCTCTGTAGGTTGGATGAGTTCATGGAGGGCTTTAATACCATATCTTTGAAACTTAAAGAAATGTATCAGGTATTCAGCTCATTTTTTGACTTGTTTTTTATATGAAAGCTTTCCCCATATAATACTAGAGTTGAATTTCATCTGGATCAGTGATTATGCCATTTATAATTTTAGGTGTAGAGGAGTGAAGTGTGCTTTAGCAAAGATAGTAGGGTATATATTTTGTTTTCTTTTTTTTGTCTCCCACTGAGTTCTGAACTTGAGATCTTAGGGCTCAACCACTTTATGGACCACTAGGCCACACCCTTGGGTGTGATTGTTTCCTGTTCTTAATCCTGTAGTTGCATGTATCAGGTATTCAGCTCCTTTTTGACTTGTTTTCTTATATTAAAGTTTTTCCCATCTAGTACTCGAGTTTAATTTCTTCTGGGTAAGTGATTATGTCACTTTATATTGTACATCATCCTGATTGTTTTCCTTTTATTAATCCTGTAGTCGGGCATCTTCTTCTTATTTCTTGTCATGTCTGATTTGGTTTTTTGCTCATATTTCTGGTGCATGGACTGCTTTGTTTAAAAATTGGGATTATGTTGTGTGCCAAAAAAGATATTTTCACTTCAAATTTCTTTCCATGTTATGAAAAAGCAAATATGTTGATGGTTATCCTTCTGGGTTTTGGGGACTCTTTTAGTTCATGATATACAACCGGTTAACCATTTATAAGTAAAAGAACGTTTTAAATAAAATAGCAAATTGTTATTAAAAAAATAAAAAAGCAAATTGTAAAGTTATTACCTGCATGAAATATACCCCTTTATTAATAGTGTATTACTTCTTTTGGTAATCTCCCAGATGATCACCCTTGGAGGCGACGCAGAACTGGAATTGGTGGATTCTCTTGATCCGTTTTCTGAAGGTGTTGTTTTCAGTGTTAGACCTCCAAAGAAGAGCTGGAAGAATATTGCTAACTTATCAGGTGGTGAAAAGGTGAGTGTCAAGAGTGGCTATATGTTTGTATGTTACTGAAAACATTATATCAAAGCAATCCGGTCTCTAATAGCAATGTTAATTTCAGACCCTCAGCTCATTGGCTCTTGTTTTTGCACTCCACCACTATAAACCCACTCCACTTTATGTGATGGATGAGATTGATGCTGCTTTAGGTATGTTCTTTTTCTGCTTATTACATTTGGCTAACAAAGATCAAGCTCCCAATATTTCATGCTTTCTTTGTGGTTTCCTTGTATGTCACAGATTTTAAGAATGTCTCGATCGTTGGGCATTATGTGAAGGACAGAACTAAAGATGCACAGTTCATAATCATAAGGTACTGCATTGGCGTATGTCCGATTCAAAGAAACAAGCACTAAGAAGCTATAGTTATCTAATTTTTGTTTTAATGATATGCAGCCTTAGAAACAATATGTTTGAGCTAGCAGATCGGCTAGTTGGTATCTACAAAACAGATAACTGCACCAAGAGCATTACTATCAATCCTGGAAGCTTTGTAGTTTCTCAAAAAGCTGCTTGAGGCTGTTCCAGAATTTCTGATCACTTTCTTTTATCTTCCCTGTGCTGACAAGAATCTGGTTGATTAACACCTTAAGCTAACATGGTGAGTTCTGTATTTTGTTGGAAGTCATTGTAATATGTATAGTTCATCTAATGAGTTACGGAATACTTACAGATATGATAAATGAAAGTTTGTGTTTGTAGTTAATGGCTACTTTCTAT</genome_strand>
        <mrna_strand>AAAAAAGTATCTGTGTACAATGAAAGAGTTCAAGAGCTTAATTCTGTTACTTTAGAGCGTGATGATATTAAAAAACAATATGATGAGTGGAGAAAGAGAAG...................................................................GTTGGATGAGTTCATGGAGGGCTTTAATACCATATCTTTGAAACTTAAAGAAATGTATCAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGATCACCCTTGGAGGCGACGCAGAACTGGAATTGGTGGATTCTCTTGATCCGTTTTCTGAAGGTGTTGTTTTCAGTGTTAGACCTCCAAAGAAGAGCTGGAAGAATATTGCTAACTTATCAGGTGGTGAAAAG........................................................................................ACCCTCAGCTCATTGGCTCTTGTTTTTGCACTCCACCACTATAAACCCACTCCACTTTATGTGATGGATGAGATTGATGCTGCTTTAG...........................................................................................ATTTTAAGAATGTCTCGATCGTTGGGCATTATGTGAAGGACAGAACTAAAGATGCACAGTTCATAATCATAAG...................................................................................CCTTAGAAACAATATGTTTGAGCTAGCAGATCGGCTAGTTGGTATCTACAAAACAGATAACTGCACCAAGAGCATTACTATCAATCCTGGAAGCTTTGTAGTTTCTCAAAAAGCTGCTTGAGGCTGTTCCAGAATTTCTGATCACTTTCTTTTATCTTCCCTGTGCTGACAAGAATCTGGTTGATTAACACCTTAAGCTAACATGGTGAGTTCTGTATTTTGTTGGAAGTCATTGTAATATGTATAGTTCATCTAATGAGTTACGGAATACTTACAGATATGATAAATGAAAGTTTGTGTTTGTAGTTAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E357847" ref_strand="+" ref_description="SGN-E357847 [cTOS-24-K20]">
      <seq>ttaaaaaaaatatgatgagtggagaaagagaaggttggatgagttcatggagggctttaataccatatctttgaaacttaaagaaatgtatcagatgatcacccttggaggcgacgcagaactggaattggtggattctcttgatccgttttctgaaggtgttgttttcagtgttagacctccaaagaagagctggaagaatattgctaacttatcaggtggtgaaaagaccctcagctcattggctcttgtttttgcactccaccactataaacccactccactttatgtgatggatgagattgatgctgctttagattttaagaatgtctcgatcgttgggcattatgtgaaggacagaactaaagatgcacagttcataatcataagccttagaaacaatatgtttgagctagcagatcggctagttggtatctacaaaacagataactgcaccaagagcattactatcaatcctggaagctttgtagtttctcaaaaagctgcttgaggctgttccagaatttctgatcactttcttttatcttccctgtgctgacaagaatctggttgattaacaccttaagctaacatggtgagttctgtattttgttggaagtcattgtaatatgtatagttcatctaatgagttacggaatacttacagatatgataaatgaaagtttgtgtttgtagttaatggctactttctattagaatatatttttaaacacattggggacagtcaaatttttgatgttgcacaacactaatgggagtatttctgagtgtcacgatttcaattttacttga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="+" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="3730" stop="6255"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="4030" g_stop="4063" g_length="34"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="33" r_length="33" r_score="0.971"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="4064" i_stop="4130" i_length="67">
            <donor d_prob="0.988" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="4131" g_stop="4191" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="34" r_stop="94" r_length="61" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="4192" i_stop="4974" i_length="783">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="4975" g_stop="5109" g_length="135"/>
          <reference_exon_boundary r_type="cDNA" r_start="95" r_stop="229" r_length="135" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="5110" i_stop="5197" i_length="88">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="5198" g_stop="5285" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="230" r_stop="317" r_length="88" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="5286" i_stop="5376" i_length="91">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="5377" g_stop="5449" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="318" r_stop="390" r_length="73" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="5450" i_stop="5532" i_length="83">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="5533" g_stop="5955" g_length="423"/>
          <reference_exon_boundary r_type="cDNA" r_start="391" r_stop="813" r_length="423" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="+" ref_id="SGN-E357847" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>814</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E357847" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="4030" e_stop="4063"/>
          <exon e_start="4131" e_stop="4191"/>
          <exon e_start="4975" e_stop="5109"/>
          <exon e_start="5198" e_stop="5285"/>
          <exon e_start="5377" e_stop="5449"/>
          <exon e_start="5533" e_stop="5955"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTAAAAAACAATATGATGAGTGGAGAAAGAGAAGGTAAGTTTCGTCCATCCTACAACCTAGATTTCTCTCTTCCATATGCCAGCTCACAACATCTCTGTAGGTTGGATGAGTTCATGGAGGGCTTTAATACCATATCTTTGAAACTTAAAGAAATGTATCAGGTATTCAGCTCATTTTTTGACTTGTTTTTTATATGAAAGCTTTCCCCATATAATACTAGAGTTGAATTTCATCTGGATCAGTGATTATGCCATTTATAATTTTAGGTGTAGAGGAGTGAAGTGTGCTTTAGCAAAGATAGTAGGGTATATATTTTGTTTTCTTTTTTTTGTCTCCCACTGAGTTCTGAACTTGAGATCTTAGGGCTCAACCACTTTATGGACCACTAGGCCACACCCTTGGGTGTGATTGTTTCCTGTTCTTAATCCTGTAGTTGCATGTATCAGGTATTCAGCTCCTTTTTGACTTGTTTTCTTATATTAAAGTTTTTCCCATCTAGTACTCGAGTTTAATTTCTTCTGGGTAAGTGATTATGTCACTTTATATTGTACATCATCCTGATTGTTTTCCTTTTATTAATCCTGTAGTCGGGCATCTTCTTCTTATTTCTTGTCATGTCTGATTTGGTTTTTTGCTCATATTTCTGGTGCATGGACTGCTTTGTTTAAAAATTGGGATTATGTTGTGTGCCAAAAAAGATATTTTCACTTCAAATTTCTTTCCATGTTATGAAAAAGCAAATATGTTGATGGTTATCCTTCTGGGTTTTGGGGACTCTTTTAGTTCATGATATACAACCGGTTAACCATTTATAAGTAAAAGAACGTTTTAAATAAAATAGCAAATTGTTATTAAAAAAATAAAAAAGCAAATTGTAAAGTTATTACCTGCATGAAATATACCCCTTTATTAATAGTGTATTACTTCTTTTGGTAATCTCCCAGATGATCACCCTTGGAGGCGACGCAGAACTGGAATTGGTGGATTCTCTTGATCCGTTTTCTGAAGGTGTTGTTTTCAGTGTTAGACCTCCAAAGAAGAGCTGGAAGAATATTGCTAACTTATCAGGTGGTGAAAAGGTGAGTGTCAAGAGTGGCTATATGTTTGTATGTTACTGAAAACATTATATCAAAGCAATCCGGTCTCTAATAGCAATGTTAATTTCAGACCCTCAGCTCATTGGCTCTTGTTTTTGCACTCCACCACTATAAACCCACTCCACTTTATGTGATGGATGAGATTGATGCTGCTTTAGGTATGTTCTTTTTCTGCTTATTACATTTGGCTAACAAAGATCAAGCTCCCAATATTTCATGCTTTCTTTGTGGTTTCCTTGTATGTCACAGATTTTAAGAATGTCTCGATCGTTGGGCATTATGTGAAGGACAGAACTAAAGATGCACAGTTCATAATCATAAGGTACTGCATTGGCGTATGTCCGATTCAAAGAAACAAGCACTAAGAAGCTATAGTTATCTAATTTTTGTTTTAATGATATGCAGCCTTAGAAACAATATGTTTGAGCTAGCAGATCGGCTAGTTGGTATCTACAAAACAGATAACTGCACCAAGAGCATTACTATCAATCCTGGAAGCTTTGTAGTTTCTCAAAAAGCTGCTTGAGGCTGTTCCAGAATTTCTGATCACTTTCTTTTATCTTCCCTGTGCTGACAAGAATCTGGTTGATTAACACCTTAAGCTAACATGGTGAGTTCTGTATTTTGTTGGAAGTCATTGTAATATGTATAGTTCATCTAATGAGTTACGGAATACTTACAGATATGATAAATGAAAGTTTGTGTTTGTAGTTAATGGCTACTTTCTATTAGAATATATTTTTAAACACATTGGGGACAGTCAAAATTTTGATGTTGCACAACACTAATGGGAGTATTTCTGAGTGTCACGATTTCAATTTTACTTGA</genome_strand>
        <mrna_strand>TTAAAAAA-AATATGATGAGTGGAGAAAGAGAAG...................................................................GTTGGATGAGTTCATGGAGGGCTTTAATACCATATCTTTGAAACTTAAAGAAATGTATCAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGATCACCCTTGGAGGCGACGCAGAACTGGAATTGGTGGATTCTCTTGATCCGTTTTCTGAAGGTGTTGTTTTCAGTGTTAGACCTCCAAAGAAGAGCTGGAAGAATATTGCTAACTTATCAGGTGGTGAAAAG........................................................................................ACCCTCAGCTCATTGGCTCTTGTTTTTGCACTCCACCACTATAAACCCACTCCACTTTATGTGATGGATGAGATTGATGCTGCTTTAG...........................................................................................ATTTTAAGAATGTCTCGATCGTTGGGCATTATGTGAAGGACAGAACTAAAGATGCACAGTTCATAATCATAAG...................................................................................CCTTAGAAACAATATGTTTGAGCTAGCAGATCGGCTAGTTGGTATCTACAAAACAGATAACTGCACCAAGAGCATTACTATCAATCCTGGAAGCTTTGTAGTTTCTCAAAAAGCTGCTTGAGGCTGTTCCAGAATTTCTGATCACTTTCTTTTATCTTCCCTGTGCTGACAAGAATCTGGTTGATTAACACCTTAAGCTAACATGGTGAGTTCTGTATTTTGTTGGAAGTCATTGTAATATGTATAGTTCATCTAATGAGTTACGGAATACTTACAGATATGATAAATGAAAGTTTGTGTTTGTAGTTAATGGCTACTTTCTATTAGAATATATTTTTAAACACATTGGGGACAGTCAAATTTTTGATGTTGCACAACACTAATGGGAGTATTTCTGAGTGTCACGATTTCAATTTTACTTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E433390" ref_strand="-" ref_description="SGN-E433390 [STM-58-M6]">
      <seq>gatgagtggagaaagagaaggttggatgagttcatggagggctttaataccatatctttgaagcttaaagaaatgtatcagatgatcacccttggaggcgacgcagaactggaattagtggattctcttgatccgttttctgaaggtgttgttttcagtgttagacctccaaagaaaagctggaagaatattgctaacttatcaggtggtgaaaagaccctcagctcattggctcttgtttttgcactccaccactataaacccactccactttatgtgatggatgagattgatgctgctttggattttaagaatgtctcaatcgtggggcattatgtcaaggacagaactaaagatgcacagttcataatcataagccttagaaacaatatgtttgagctagcagataggctagttggaatctacaaaacggataactgcaccaagagcattactatcaatccaggaagctttgtagtttctcagaaagttgcttgaggttgttttagaatttctgatccctttcttctatcttccttgtgctgacaagaatctggttgattaacaccttaagctaacatggtaagttctgtattttgttggaagtcattgtaatatgtatatttcatctaatgagttacggaatacttattgatatgattgatggaagtttgtgtttgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="+" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="3744" stop="6136"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="4044" g_stop="4063" g_length="20"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="20" r_length="20" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="4064" i_stop="4130" i_length="67">
            <donor d_prob="0.988" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="4131" g_stop="4191" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="21" r_stop="81" r_length="61" r_score="0.984"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="4192" i_stop="4974" i_length="783">
            <donor d_prob="0.973" d_score="0.98"/>
            <acceptor a_prob="0.998" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="4975" g_stop="5109" g_length="135"/>
          <reference_exon_boundary r_type="cDNA" r_start="82" r_stop="216" r_length="135" r_score="0.985"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="5110" i_stop="5197" i_length="88">
            <donor d_prob="0.995" d_score="0.98"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="5198" g_stop="5285" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="217" r_stop="304" r_length="88" r_score="0.989"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="5286" i_stop="5376" i_length="91">
            <donor d_prob="0.992" d_score="0.98"/>
            <acceptor a_prob="0.983" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="5377" g_stop="5449" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="305" r_stop="377" r_length="73" r_score="0.959"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="5450" i_stop="5532" i_length="83">
            <donor d_prob="0.000" d_score="0.98"/>
            <acceptor a_prob="0.994" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="5533" g_stop="5836" g_length="304"/>
          <reference_exon_boundary r_type="cDNA" r_start="378" r_stop="681" r_length="304" r_score="0.938"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="+" ref_id="SGN-E433390" ref_strand="-">
        <total_alignment_score>0.961</total_alignment_score>
        <cumulative_length_of_scored_exons>681</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E433390" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="4044" e_stop="4063"/>
          <exon e_start="4131" e_stop="4191"/>
          <exon e_start="4975" e_stop="5109"/>
          <exon e_start="5198" e_stop="5285"/>
          <exon e_start="5377" e_stop="5449"/>
          <exon e_start="5533" e_stop="5836"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATGAGTGGAGAAAGAGAAGGTAAGTTTCGTCCATCCTACAACCTAGATTTCTCTCTTCCATATGCCAGCTCACAACATCTCTGTAGGTTGGATGAGTTCATGGAGGGCTTTAATACCATATCTTTGAAACTTAAAGAAATGTATCAGGTATTCAGCTCATTTTTTGACTTGTTTTTTATATGAAAGCTTTCCCCATATAATACTAGAGTTGAATTTCATCTGGATCAGTGATTATGCCATTTATAATTTTAGGTGTAGAGGAGTGAAGTGTGCTTTAGCAAAGATAGTAGGGTATATATTTTGTTTTCTTTTTTTTGTCTCCCACTGAGTTCTGAACTTGAGATCTTAGGGCTCAACCACTTTATGGACCACTAGGCCACACCCTTGGGTGTGATTGTTTCCTGTTCTTAATCCTGTAGTTGCATGTATCAGGTATTCAGCTCCTTTTTGACTTGTTTTCTTATATTAAAGTTTTTCCCATCTAGTACTCGAGTTTAATTTCTTCTGGGTAAGTGATTATGTCACTTTATATTGTACATCATCCTGATTGTTTTCCTTTTATTAATCCTGTAGTCGGGCATCTTCTTCTTATTTCTTGTCATGTCTGATTTGGTTTTTTGCTCATATTTCTGGTGCATGGACTGCTTTGTTTAAAAATTGGGATTATGTTGTGTGCCAAAAAAGATATTTTCACTTCAAATTTCTTTCCATGTTATGAAAAAGCAAATATGTTGATGGTTATCCTTCTGGGTTTTGGGGACTCTTTTAGTTCATGATATACAACCGGTTAACCATTTATAAGTAAAAGAACGTTTTAAATAAAATAGCAAATTGTTATTAAAAAAATAAAAAAGCAAATTGTAAAGTTATTACCTGCATGAAATATACCCCTTTATTAATAGTGTATTACTTCTTTTGGTAATCTCCCAGATGATCACCCTTGGAGGCGACGCAGAACTGGAATTGGTGGATTCTCTTGATCCGTTTTCTGAAGGTGTTGTTTTCAGTGTTAGACCTCCAAAGAAGAGCTGGAAGAATATTGCTAACTTATCAGGTGGTGAAAAGGTGAGTGTCAAGAGTGGCTATATGTTTGTATGTTACTGAAAACATTATATCAAAGCAATCCGGTCTCTAATAGCAATGTTAATTTCAGACCCTCAGCTCATTGGCTCTTGTTTTTGCACTCCACCACTATAAACCCACTCCACTTTATGTGATGGATGAGATTGATGCTGCTTTAGGTATGTTCTTTTTCTGCTTATTACATTTGGCTAACAAAGATCAAGCTCCCAATATTTCATGCTTTCTTTGTGGTTTCCTTGTATGTCACAGATTTTAAGAATGTCTCGATCGTTGGGCATTATGTGAAGGACAGAACTAAAGATGCACAGTTCATAATCATAAGGTACTGCATTGGCGTATGTCCGATTCAAAGAAACAAGCACTAAGAAGCTATAGTTATCTAATTTTTGTTTTAATGATATGCAGCCTTAGAAACAATATGTTTGAGCTAGCAGATCGGCTAGTTGGTATCTACAAAACAGATAACTGCACCAAGAGCATTACTATCAATCCTGGAAGCTTTGTAGTTTCTCAAAAAGCTGCTTGAGGCTGTTCCAGAATTTCTGATCACTTTCTTTTATCTTCCCTGTGCTGACAAGAATCTGGTTGATTAACACCTTAAGCTAACATGGTGAGTTCTGTATTTTGTTGGAAGTCATTGTAATATGTATAGTTCATCTAATGAGTTACGGAATACTTACAGATATGATAAATGAAAGTTTGTGTTTGT</genome_strand>
        <mrna_strand>GATGAGTGGAGAAAGAGAAG...................................................................GTTGGATGAGTTCATGGAGGGCTTTAATACCATATCTTTGAAGCTTAAAGAAATGTATCAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGATCACCCTTGGAGGCGACGCAGAACTGGAATTAGTGGATTCTCTTGATCCGTTTTCTGAAGGTGTTGTTTTCAGTGTTAGACCTCCAAAGAAAAGCTGGAAGAATATTGCTAACTTATCAGGTGGTGAAAAG........................................................................................ACCCTCAGCTCATTGGCTCTTGTTTTTGCACTCCACCACTATAAACCCACTCCACTTTATGTGATGGATGAGATTGATGCTGCTTTGG...........................................................................................ATTTTAAGAATGTCTCAATCGTGGGGCATTATGTCAAGGACAGAACTAAAGATGCACAGTTCATAATCATAAG...................................................................................CCTTAGAAACAATATGTTTGAGCTAGCAGATAGGCTAGTTGGAATCTACAAAACGGATAACTGCACCAAGAGCATTACTATCAATCCAGGAAGCTTTGTAGTTTCTCAGAAAGTTGCTTGAGGTTGTTTTAGAATTTCTGATCCCTTTCTTCTATCTTCCTTGTGCTGACAAGAATCTGGTTGATTAACACCTTAAGCTAACATGGTAAGTTCTGTATTTTGTTGGAAGTCATTGTAATATGTATATTTCATCTAATGAGTTACGGAATACTTATTGATATGATTGATGGAAGTTTGTGTTTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E544664" ref_strand="+" ref_description="SGN-E544664 [TUS-67-B20]">
      <seq>tgcagaggaagaagtagatttgttatacaagaagtatgctgaaagaatgagctggtttgatgttctcaatcatgaaaggctatgtgccttaaatgcagtattgaggaagcacttgtcaagtccaaattcatttgagtatgaaatggagcctacagttggtttgcctgtccaatatagttcattgaacaaaatggatagaaaaagacttgtgaggaacttagagagtgatttggagttggtttatgtggcacaatcatgtttatcatgggaagcacttcatcatcagtataaaaaagtaaaggctctttgtggttcaacttcaaaaaatggggtcttttatggtaatgtagcagcaagatttcagaaattccaagtattgctagaaagatttgtggaagatgatagctgtggaggcaaaaggcatttgaattatgttcatacaagattttcccaaaagaatctcctccaagttccagagatttctggatacgtagaatcaaatgaaagagtggatggagaaataatgaagccaatagaagtgctaaaggccattgagaaatgcatatatgctttttggttttatgtaagaagagattgcaagaaaaagaagaattttttgtggagtcaatctcgtgttgaagaccccagagacatactgttcctgcctgacttgactaggaaacttcaaatgaaagagttatggatgaaggatgtgaaaggtaagagaaaatgttggc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="+" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="8005" stop="10839"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="8305" g_stop="8396" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="92" r_length="92" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="8397" i_stop="8729" i_length="333">
            <donor d_prob="0.865" d_score="1.00"/>
            <acceptor a_prob="0.735" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="8730" g_stop="9122" g_length="393"/>
          <reference_exon_boundary r_type="cDNA" r_start="93" r_stop="485" r_length="393" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="9123" i_stop="10168" i_length="1046">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="10169" g_stop="10374" g_length="206"/>
          <reference_exon_boundary r_type="cDNA" r_start="486" r_stop="691" r_length="206" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="10375" i_stop="10493" i_length="119">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.873" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="10494" g_stop="10539" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="692" r_stop="737" r_length="46" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="+" ref_id="SGN-E544664" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>737</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E544664" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="8305" e_stop="8396"/>
          <exon e_start="8730" e_stop="9122"/>
          <exon e_start="10169" e_stop="10374"/>
          <exon e_start="10494" e_stop="10539"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCAGAGGAAGAAGTAGATTTGTTATACAAGAAGTATGCTGAAAGAATGAGCTGGTTTGATGTTCTCAATCATGAAAGGCTATGTGCCTTAAGTGAGTTTCTCCTTTTGCCCAAGTACTTTTTCTTATGCTATAACCTGTTGTTTTGGCTAACTTTTGCACAACTCGACTATTTGACAGATATAGATTAACACTATATATTGGGAAGTTGGAAGGAAATGACCTAGCCTTTTTTTTTCCGCTATGGGATACTGAATCCTGGTCTGTCATATGCATGACTTTTTCAGAGTTAATTATAGACCAGTAGGCCACATCTGGGGACTAGATACAAATTTTTTTTTCATATAAATATGAGTTTTCTTGATATTATAGTATGCTTAAGTAATCCTTCACAATTTTATTAATTGTTGGTTATATATTAATTAGATGCAGTATTGAGGAAGCACTTGTCAAGTCCAAATTCATTTGAGTATGAAATGGAGCCTACAGTTGGTTTGCCTGTCCAATATAGTTCATTGAACAAAATGGATAGAAAAAGACTTGTGAGGAACTTAGAGAGTGATTTGGAGTTGGTTTATGTGGCACAATCATGTTTATCATGGGAAGCACTTCATCATCAGTATAAAAAAGTAAAGGCTCTTTGTGGTTCAACTTCAAAAAATGGGGTCTTTTATGGTAATGTAGCAGCAAGATTTCAGAAATTCCAAGTATTGCTAGAAAGATTTGTGGAAGATGATAGCTGTGGAGGCAAAAGGCATTTGAATTATGTTCATACAAGATTTTCCCAAAAGAATCTCCTCCAAGTTCCAGAGATTTCTGGTAATCTTTTGTCTCTTAAACATTTTTTTTGAAAAGTTCAACTTCTATAGATTAACCGCGTAAAAGAATTGTTACATTTCCAACAACATATATAGTAAAATTGCTATTGTCTGAAAAAGATTGTTTCTCTAAACCCCCGGCTCATGACGTAACACATAATTGTTACATTTTCAAGTCACCTAAACTAAATATCAATTTCAAGCTCTCATTCATAAGTAAAAAAAATTAGTAACTTTAAAAATGATAAATTACCTGCTAAATATATTAAGTGTTGTTGTATACTTTCAATATTTATAAATTAGGGGTTGAGCTGAAAGATCCAACCTTTCAGTTTGTATTTAATAATCAACTAGATGTATATATAAGTAACTAAATCCAAAATCTAGTTACTAATTCTTGATGTCGCTATTCTTAAATTTAATATAGACCCTCTAATTTTGACTTGCATGGCAAGTTGATATTCATTAGTACGTCGCTTATCTAGTTCTTACGTGTAACGACTAGATCTCCATTTCTTGTAGGAGTATTAATTAACACATTGATAAAGAACTTCTTTCATTAACAAAAATAATTACTACTTATATGTAAAAACAATTTGAGCTTATACGAATTAAATAGTATTTTATTTTGGGGACATGCAATTTCGGTAATTACAAAAATTAGTATTAAGAAGATCTCAGTCGCCATTGGTTTATTCTGCTGCTAAAAGGGGAGAAATTAAAACTAATCACACTCCCCCACCTAATACTACCTAAATTGTTTATTTCGTACGTTGCCTTCCTATATACCCAAGAAATTACTACTTAATTATCGTCAAGTATTTTATAAGAGCTCTCTTATTCTAACATCTTAAGATTACTAGTCCTACACGTTACTAATGAAAAATATTATTAGTGTTAGAAAAAAGATAAAAGAAAAGAATTCTTTTAAGGATATTTAAGACCATATGCAATAATATTTTTACGTAATATATACATTTTATTCAAAACTGAACAAGTTATATGTCGATTTTGAAATTCAGAATTCATAAATTTAAAATTTTGTAGGATACGTAGAATCAAATGAAAGAGTGGATGGAGAAATAATGAAGCCAATAGAAGTGCTAAAGGCCATTGAGAAATGCATATATGCTTTTTGGTTTTATGTAAGAAGAGATTGCAAGAAAAAGAAGAATTTTTTGTGGAGTCAATCTCGTGTTGAAGACCCCAGAGACATACTGTTCCTGCCTGACTTGACTAGGAAACTTCAAATGGTACGCCTCTCTCTTTCTATAATATTTTTAATAACATAAGTCATTTTCTGATGTAATTGGTTTTTAAACATTTTGTAACTGAAGATGATTTTTTGTTGTTGTTGTTGGTTACGGTGAAGAAAGAGTTATGGATGAAGGATGTGAAAGGTAAGAGAAAATGTTGGC</genome_strand>
        <mrna_strand>TGCAGAGGAAGAAGTAGATTTGTTATACAAGAAGTATGCTGAAAGAATGAGCTGGTTTGATGTTCTCAATCATGAAAGGCTATGTGCCTTAA.............................................................................................................................................................................................................................................................................................................................................ATGCAGTATTGAGGAAGCACTTGTCAAGTCCAAATTCATTTGAGTATGAAATGGAGCCTACAGTTGGTTTGCCTGTCCAATATAGTTCATTGAACAAAATGGATAGAAAAAGACTTGTGAGGAACTTAGAGAGTGATTTGGAGTTGGTTTATGTGGCACAATCATGTTTATCATGGGAAGCACTTCATCATCAGTATAAAAAAGTAAAGGCTCTTTGTGGTTCAACTTCAAAAAATGGGGTCTTTTATGGTAATGTAGCAGCAAGATTTCAGAAATTCCAAGTATTGCTAGAAAGATTTGTGGAAGATGATAGCTGTGGAGGCAAAAGGCATTTGAATTATGTTCATACAAGATTTTCCCAAAAGAATCTCCTCCAAGTTCCAGAGATTTCTG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATACGTAGAATCAAATGAAAGAGTGGATGGAGAAATAATGAAGCCAATAGAAGTGCTAAAGGCCATTGAGAAATGCATATATGCTTTTTGGTTTTATGTAAGAAGAGATTGCAAGAAAAAGAAGAATTTTTTGTGGAGTCAATCTCGTGTTGAAGACCCCAGAGACATACTGTTCCTGCCTGACTTGACTAGGAAACTTCAAATG.......................................................................................................................AAAGAGTTATGGATGAAGGATGTGAAAGGTAAGAGAAAATGTTGGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E305900" ref_strand="+" ref_description="SGN-E305900 [cLEY-17-L15]">
      <seq>gcagaggaagaagtagatttgttatacaagaagtatgctgaaagaatgagctggtttgatgttctcaatcatgaaaggctatgtgccttaaatgcagtattgaggaagcacttgtcaagtccaaattcatttgagtatgaaatggagcctacagttggtttgcctgtccaatatagttcattgaacaaaatggatagaaaaagacttgtgaggaacttagagagtgatttggagttggtttatgtggcacaatcatgtttatcatgggaagcacttcatcatcagtataaaaaagtaaaggctctttgtggttcaacttcaaaaaatggggtcttttatggtaatgtagcagcaagatttcagaaattccaagtattgctagaaagatttgtggaagatgatagctgtggaggcaaaaggcatttgaattatgttcatacaagattttcccaaaagaatctcctccaagttccagagatttctggatacgtagaatcaaatgaaagagtggatggagaaataat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="+" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="8006" stop="10508"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="8306" g_stop="8396" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="91" r_length="91" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="8397" i_stop="8729" i_length="333">
            <donor d_prob="0.865" d_score="1.00"/>
            <acceptor a_prob="0.735" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="8730" g_stop="9122" g_length="393"/>
          <reference_exon_boundary r_type="cDNA" r_start="92" r_stop="484" r_length="393" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="9123" i_stop="10168" i_length="1046">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="10169" g_stop="10208" g_length="40"/>
          <reference_exon_boundary r_type="cDNA" r_start="485" r_stop="524" r_length="40" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="+" ref_id="SGN-E305900" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>524</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E305900" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="8306" e_stop="8396"/>
          <exon e_start="8730" e_stop="9122"/>
          <exon e_start="10169" e_stop="10208"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAGAGGAAGAAGTAGATTTGTTATACAAGAAGTATGCTGAAAGAATGAGCTGGTTTGATGTTCTCAATCATGAAAGGCTATGTGCCTTAAGTGAGTTTCTCCTTTTGCCCAAGTACTTTTTCTTATGCTATAACCTGTTGTTTTGGCTAACTTTTGCACAACTCGACTATTTGACAGATATAGATTAACACTATATATTGGGAAGTTGGAAGGAAATGACCTAGCCTTTTTTTTTCCGCTATGGGATACTGAATCCTGGTCTGTCATATGCATGACTTTTTCAGAGTTAATTATAGACCAGTAGGCCACATCTGGGGACTAGATACAAATTTTTTTTTCATATAAATATGAGTTTTCTTGATATTATAGTATGCTTAAGTAATCCTTCACAATTTTATTAATTGTTGGTTATATATTAATTAGATGCAGTATTGAGGAAGCACTTGTCAAGTCCAAATTCATTTGAGTATGAAATGGAGCCTACAGTTGGTTTGCCTGTCCAATATAGTTCATTGAACAAAATGGATAGAAAAAGACTTGTGAGGAACTTAGAGAGTGATTTGGAGTTGGTTTATGTGGCACAATCATGTTTATCATGGGAAGCACTTCATCATCAGTATAAAAAAGTAAAGGCTCTTTGTGGTTCAACTTCAAAAAATGGGGTCTTTTATGGTAATGTAGCAGCAAGATTTCAGAAATTCCAAGTATTGCTAGAAAGATTTGTGGAAGATGATAGCTGTGGAGGCAAAAGGCATTTGAATTATGTTCATACAAGATTTTCCCAAAAGAATCTCCTCCAAGTTCCAGAGATTTCTGGTAATCTTTTGTCTCTTAAACATTTTTTTTGAAAAGTTCAACTTCTATAGATTAACCGCGTAAAAGAATTGTTACATTTCCAACAACATATATAGTAAAATTGCTATTGTCTGAAAAAGATTGTTTCTCTAAACCCCCGGCTCATGACGTAACACATAATTGTTACATTTTCAAGTCACCTAAACTAAATATCAATTTCAAGCTCTCATTCATAAGTAAAAAAAATTAGTAACTTTAAAAATGATAAATTACCTGCTAAATATATTAAGTGTTGTTGTATACTTTCAATATTTATAAATTAGGGGTTGAGCTGAAAGATCCAACCTTTCAGTTTGTATTTAATAATCAACTAGATGTATATATAAGTAACTAAATCCAAAATCTAGTTACTAATTCTTGATGTCGCTATTCTTAAATTTAATATAGACCCTCTAATTTTGACTTGCATGGCAAGTTGATATTCATTAGTACGTCGCTTATCTAGTTCTTACGTGTAACGACTAGATCTCCATTTCTTGTAGGAGTATTAATTAACACATTGATAAAGAACTTCTTTCATTAACAAAAATAATTACTACTTATATGTAAAAACAATTTGAGCTTATACGAATTAAATAGTATTTTATTTTGGGGACATGCAATTTCGGTAATTACAAAAATTAGTATTAAGAAGATCTCAGTCGCCATTGGTTTATTCTGCTGCTAAAAGGGGAGAAATTAAAACTAATCACACTCCCCCACCTAATACTACCTAAATTGTTTATTTCGTACGTTGCCTTCCTATATACCCAAGAAATTACTACTTAATTATCGTCAAGTATTTTATAAGAGCTCTCTTATTCTAACATCTTAAGATTACTAGTCCTACACGTTACTAATGAAAAATATTATTAGTGTTAGAAAAAAGATAAAAGAAAAGAATTCTTTTAAGGATATTTAAGACCATATGCAATAATATTTTTACGTAATATATACATTTTATTCAAAACTGAACAAGTTATATGTCGATTTTGAAATTCAGAATTCATAAATTTAAAATTTTGTAGGATACGTAGAATCAAATGAAAGAGTGGATGGAGAAATAAT</genome_strand>
        <mrna_strand>GCAGAGGAAGAAGTAGATTTGTTATACAAGAAGTATGCTGAAAGAATGAGCTGGTTTGATGTTCTCAATCATGAAAGGCTATGTGCCTTAA.............................................................................................................................................................................................................................................................................................................................................ATGCAGTATTGAGGAAGCACTTGTCAAGTCCAAATTCATTTGAGTATGAAATGGAGCCTACAGTTGGTTTGCCTGTCCAATATAGTTCATTGAACAAAATGGATAGAAAAAGACTTGTGAGGAACTTAGAGAGTGATTTGGAGTTGGTTTATGTGGCACAATCATGTTTATCATGGGAAGCACTTCATCATCAGTATAAAAAAGTAAAGGCTCTTTGTGGTTCAACTTCAAAAAATGGGGTCTTTTATGGTAATGTAGCAGCAAGATTTCAGAAATTCCAAGTATTGCTAGAAAGATTTGTGGAAGATGATAGCTGTGGAGGCAAAAGGCATTTGAATTATGTTCATACAAGATTTTCCCAAAAGAATCTCCTCCAAGTTCCAGAGATTTCTG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATACGTAGAATCAAATGAAAGAGTGGATGGAGAAATAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E544663" ref_strand="+" ref_description="SGN-E544663 [TUS-67-B20](-)">
      <seq>gatgatagctgtggaggcaaaaggcatttgaattatgttcatacaagattttcccaaaagaatctcctccaagttccagagatttctggatacgtagaatcaaatgaaagagtggatggagaaataatgaagccaatagaagtgctaaaggccattgagaaatgcatatatgctttttggttttatgtaagaagagattgcaagaaaaagaagaattttttgtggagtcaatctcgtgttgaagaccccagagacatactgttcctgcctgacttgactaggaaacttcaaatgaaagagttatggatgaaggatgtgaaaggtaagagaaaatgttggcttagaagagcaaaaaagggtgaacaagaagagttgaacaaaatagagttagtgttgacattgatagagatgaagctggtatcaaggattctccatatgtccattatttctacatctcatttcaaatggtgccaacaaaagctagataatatagagttcaaaaatggtcacattttaaggagcccaactatcctaccgctgtttccatcttgattagatcacatcaaattttctttttatttagaaaattagattgtatatagttaagcatacttgttcttcttctacaaagagtgcacgcatgtcatgtaaatctattacaattagcttcttcttttgggatagccatatcaatgacaaaaataaattttagtaataaaaaaaaaaaaaaaaaactcgaggggggccc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="+" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="8735" stop="52146"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="9035" g_stop="9122" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="88" r_length="88" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="9123" i_stop="10168" i_length="1046">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="10169" g_stop="10374" g_length="206"/>
          <reference_exon_boundary r_type="cDNA" r_start="89" r_stop="294" r_length="206" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="10375" i_stop="10493" i_length="119">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.873" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="10494" g_stop="10922" g_length="429"/>
          <reference_exon_boundary r_type="cDNA" r_start="295" r_stop="723" r_length="429" r_score="0.993"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="10923" i_stop="13375" i_length="2453">
            <donor d_prob="0.000" d_score="0.94"/>
            <acceptor a_prob="0.974" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="13376" g_stop="13400" g_length="25"/>
          <reference_exon_boundary r_type="cDNA" r_start="724" r_stop="748" r_length="25" r_score="0.480"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="+" ref_id="SGN-E544663" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>748</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E544663" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="9035" e_stop="9122"/>
          <exon e_start="10169" e_stop="10374"/>
          <exon e_start="10494" e_stop="10922"/>
          <exon e_start="13376" e_stop="13400"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATGATAGCTGTGGAGGCAAAAGGCATTTGAATTATGTTCATACAAGATTTTCCCAAAAGAATCTCCTCCAAGTTCCAGAGATTTCTGGTAATCTTTTGTCTCTTAAACATTTTTTTTGAAAAGTTCAACTTCTATAGATTAACCGCGTAAAAGAATTGTTACATTTCCAACAACATATATAGTAAAATTGCTATTGTCTGAAAAAGATTGTTTCTCTAAACCCCCGGCTCATGACGTAACACATAATTGTTACATTTTCAAGTCACCTAAACTAAATATCAATTTCAAGCTCTCATTCATAAGTAAAAAAAATTAGTAACTTTAAAAATGATAAATTACCTGCTAAATATATTAAGTGTTGTTGTATACTTTCAATATTTATAAATTAGGGGTTGAGCTGAAAGATCCAACCTTTCAGTTTGTATTTAATAATCAACTAGATGTATATATAAGTAACTAAATCCAAAATCTAGTTACTAATTCTTGATGTCGCTATTCTTAAATTTAATATAGACCCTCTAATTTTGACTTGCATGGCAAGTTGATATTCATTAGTACGTCGCTTATCTAGTTCTTACGTGTAACGACTAGATCTCCATTTCTTGTAGGAGTATTAATTAACACATTGATAAAGAACTTCTTTCATTAACAAAAATAATTACTACTTATATGTAAAAACAATTTGAGCTTATACGAATTAAATAGTATTTTATTTTGGGGACATGCAATTTCGGTAATTACAAAAATTAGTATTAAGAAGATCTCAGTCGCCATTGGTTTATTCTGCTGCTAAAAGGGGAGAAATTAAAACTAATCACACTCCCCCACCTAATACTACCTAAATTGTTTATTTCGTACGTTGCCTTCCTATATACCCAAGAAATTACTACTTAATTATCGTCAAGTATTTTATAAGAGCTCTCTTATTCTAACATCTTAAGATTACTAGTCCTACACGTTACTAATGAAAAATATTATTAGTGTTAGAAAAAAGATAAAAGAAAAGAATTCTTTTAAGGATATTTAAGACCATATGCAATAATATTTTTACGTAATATATACATTTTATTCAAAACTGAACAAGTTATATGTCGATTTTGAAATTCAGAATTCATAAATTTAAAATTTTGTAGGATACGTAGAATCAAATGAAAGAGTGGATGGAGAAATAATGAAGCCAATAGAAGTGCTAAAGGCCATTGAGAAATGCATATATGCTTTTTGGTTTTATGTAAGAAGAGATTGCAAGAAAAAGAAGAATTTTTTGTGGAGTCAATCTCGTGTTGAAGACCCCAGAGACATACTGTTCCTGCCTGACTTGACTAGGAAACTTCAAATGGTACGCCTCTCTCTTTCTATAATATTTTTAATAACATAAGTCATTTTCTGATGTAATTGGTTTTTAAACATTTTGTAACTGAAGATGATTTTTTGTTGTTGTTGTTGGTTACGGTGAAGAAAGAGTTATGGATGAAGGATGTGAAAGGTAAGAGAAAATGTTGGCTTAGAAGAGCAAAAAAGGGTGAACAAGAAGAGTTGAACAAAATAGAGTTAGTGTTGACATTGATAGAGATGAAGCTGGTATCAAGGATTCTCCATATGTCCATTATTTCTACATCTCATTTCAAATGGTGCCAACAAAAGCTAGATAATATAGAGTTCAAAAATGGTCACATTTTAAGGAGCCCAACTATCCTACCGCTGTTTCCATCTTGATTAGATCACATCAAATTTTCTTTTTATTTAGAAAATTAGATTGTATATAGTTAAGCATACTTGTTCTTCTTCTACAAAGAGTGCACGCATGTCATGTAAATCTATTACAATTAGCTTCTTCTTTTGGGATAGCCATATCAATGACAAAAATAAATTTTAGTAATAATTAATGTGCACCTTAAATAAAAAACTGCTATTGAAATTAGTAAATAGACTTTTTATTATTGTTATAGGCTTTACAAATATTTACATAAAAGAGCTAATTGTTATTAAAAAAAGGAAAAATTTCATATATGACAAACTGAATTTATGAAATAACATTATGGGTATTGTTTATATAATTACATTTTATGGTGTTTAATTCGTTATGTAGTTTTTTATTTTGTATAAAACGTTTTTTAAAAATTTGTACTATATTTTACTTTTTTATTTAATAGTAATAATAGCCCTAAATATGGTAACAAACATTTACATAATTCCCATAATTTAAGCTAAACATTCAAAATCAAATATTTTCTAAAAATAGAATTCTATTTGTTGACATCCAATTTTGACCGACCTTTCAACTTTATTAGAAATCCTATTCGATTAAATACGTATTTTAAATTTTAGAATTTTTAGTCGACTTTGCTTGAAAATTATATATTTTAGTATGTTTTATTTTATAAAATTATCGTAAATATTATAATATTTTAAAATTATTAATGAATTTCAAATGTTTTAAAATTAAAATGTTTTGGCTCTTATTTATTAAAGTAAAAGAATATTGTCTTCCTTACTTTACTCTTACTCATTTATTTTTTTAGTAATGAAATATTAAATTAAAAAAATCTGATTTGTCTCTCCTTATTTAAGATAAATAATAATAATATTTCTCTTCCTAATTTATTCTTGCTTATATTTGGAAGTGATATATTTTTATTTTGGCTGATTTGAATCTCCTTTTTAATAAGGAAAATGATATATTTAATTAACTCCTTTAAATATCTTTCTTCCTTATTTGTTTCCTCCTCTTTGCTATATAAATAAGACCCCTCCCTTCATCAACTCAGAGACACTCATTCACTCTCAATCAAAAAAAAATTCTCTCATCACTCTCTCTTCTCTCACTGCTCTCTTGCTACTTTAACAACACATTAATATTCCGATAAATATTCAAGTGTTCTTCGCTATTTTGCTACTTTCGAGTAAAAGGTGAATTAATTTGTTTTGCTTAACCGTTATTTGATTACTTTGACAGGTTTCAAACTTGAAGTTCAAGTTGAAGATTAATTGAAGAAAGATTTATTTGTTTATTTGAATGTGTGTGTGTATATATATATATATATATATATATTTTTTTTTATTTTTTGCCTATTTTATTTATTCGAATGTTGTAACAATTGTAATTCTAAAAGATCATATATATATATAATTATTTGGGGGATCGTCTAGGGGAGGGGGATTTATATGCTTACTTGTTCATTATAAATTTTTTAGAAATCATGCCTAGGTTTGTCTTTAACCACCTAGATTTGATATTTGTAGGTGTTATAATCTAATCAATTTTCAATTTGCTTGACGTTTTTGTTAACAAGTCTTAAAAAATAAGAACTAGAGTCCATTAATTTTTTAAATGTTAAAATCAAATCCTAATAAATCTAGTAGGTTGTTAGATGTTAAAAATATATTATAAATTCTCATTTGTCTTATCACGTAGAAACTATGCCTAAGTATTAAATTGTTCATATCATTTACAAAATCATGCATATATGTGTTACTCCTTCTTTTAAACGCCTAGAAATTCATGTCTATAGGCTTGAAATAACTTTTAACATATCCGTAAAAATAAAATTTATTTGTGCATATTTGTGTCCTTCCCCATAAAATGGTCAATATTAATTTTATTTGTCTTCCTCATTCATGATGCAATATGTTTTTTTTTAATAATACTAATTTAGAATCATTTCATGCATTTAACTTGGCTTTAAAAATATTTCATATCAAAACCTTGTAACATAATTTTCTTGAAAAGTCATTATTTAAACTTTGGATTGATTTTGACATTGTTTATTTTGAAAGTAAATTATAAGTACTATCTCCTAACCTATCGTTAGTGGGAAAGTCAAAGGAACTATGAGGTCTAGTTCCAATTTTTTAAACCTGACGCATCCTCGGAAGTACCACCTACCCATGAATTTCAAAAAGAATTATGTGCATTTATGTGTAAATGTTTACGTGCCTATGTGTGAACTAAATCTTTTAAATCATTTTTCAAAAACATAAACTATTTTTAGACCGACCTCAAATCAAAATTGTTTCTATGGTGGAGGAGCGCGATCAACAATATCGTGGCATCATCCCTACAAAGAAACAAACATTTTTAAATAAAAATTCCTACTCAAAGCTTATCAATTTTCAAACTTTATTTTTGCACATATTAATTGCTTAATATTTGCCAATTTTGTATGTTAAATAAATAAATAAAAAATAATAAACTTGGTTGTTTATTATTGCTGTCTTCTAGCCTCGCATATTTAAATTAATAAAATAGCCTTAATTGTTTTATACTTGTTATCACTTAGCAAGCATATTAATGAATAATAATGAAGTGACCTTGATTGCTACTTGTAACCCCCACATAGATTGCATGAGATACGGCCGGGACCC</genome_strand>
        <mrna_strand>GATGATAGCTGTGGAGGCAAAAGGCATTTGAATTATGTTCATACAAGATTTTCCCAAAAGAATCTCCTCCAAGTTCCAGAGATTTCTG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATACGTAGAATCAAATGAAAGAGTGGATGGAGAAATAATGAAGCCAATAGAAGTGCTAAAGGCCATTGAGAAATGCATATATGCTTTTTGGTTTTATGTAAGAAGAGATTGCAAGAAAAAGAAGAATTTTTTGTGGAGTCAATCTCGTGTTGAAGACCCCAGAGACATACTGTTCCTGCCTGACTTGACTAGGAAACTTCAAATG.......................................................................................................................AAAGAGTTATGGATGAAGGATGTGAAAGGTAAGAGAAAATGTTGGCTTAGAAGAGCAAAAAAGGGTGAACAAGAAGAGTTGAACAAAATAGAGTTAGTGTTGACATTGATAGAGATGAAGCTGGTATCAAGGATTCTCCATATGTCCATTATTTCTACATCTCATTTCAAATGGTGCCAACAAAAGCTAGATAATATAGAGTTCAAAAATGGTCACATTTTAAGGAGCCCAACTATCCTACCGCTGTTTCCATCTTGATTAGATCACATCAAATTTTCTTTTTATTTAGAAAATTAGATTGTATATAGTTAAGCATACTTGTTCTTCTTCTACAAAGAGTGCACGCATGTCATGTAAATCTATTACAATTAGCTTCTTCTTTTGGGATAGCCATATCAATGACAAAAATAAATTTTAGTAATAAAAAAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAACTCGAGGGGGGCCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E256788" ref_strand="+" ref_description="SGN-E256788 [cLEG-40-A22]">
      <seq>ttttgtctataacatagcctcgtatgttaaataaataaaaaataaacttgattgtttattattgctgtcatctagcctcgcatgtttaaattaataaaatagccttaattgttttatacttgttatcacttagcaaagcacattaatgaataataatgaagtgaccttgattgctacttgtaacccccacatagattgcatgagatacggccgggacccacacttgtggacctcgaggcatgcctaacaccttcccctcgaggtaatttgaacccttaccctaatctctggctcgttgaccttagttagacttaattaggttagataggtgccct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="+" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="12911" stop="13817"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="13211" g_stop="13517" g_length="307"/>
          <reference_exon_boundary r_type="cDNA" r_start="28" r_stop="335" r_length="308" r_score="0.958"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="+" ref_id="SGN-E256788" ref_strand="+">
        <total_alignment_score>0.958</total_alignment_score>
        <cumulative_length_of_scored_exons>307</cumulative_length_of_scored_exons>
        <coverage percentage="0.916" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E256788" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="13211" e_stop="13517"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAATAAA-AAATAATAAACTTGGTTGTTTATTATTGCTGTCTTCTAGCCTCGCATATTTAAATTAATAAAATAGCCTTAATTGTTTTATACTTGTTATCACTTAGC-AAGCATATTAATGAATAATAATGAAGTGACCTTGATTGCTACTTGTAACCCCCACATAGATTGCATGAGATACGGCCGGGACCCACACTTGTGGACCTCGAGGGATGCCTAACACCTTCCCCTCGAGGTAATTTGAACCCTTACCCTAATTCTTTGGCTCGTTGACCTTAGTTAGACTTAGTTAGGTTAGATAGGTGCCCT</genome_strand>
        <mrna_strand>TAAATAAATAAAAAATAAACTTGATTGTTTATTATTGCTGTCATCTAGCCTCGCATGTTTAAATTAATAAAATAGCCTTAATTGTTTTATACTTGTTATCACTTAGCAAAGCACATTAATGAATAATAATGAAGTGACCTTGATTGCTACTTGTAACCCCCACATAGATTGCATGAGATACGGCCGGGACCCACACTTGTGGACCTCGAGGCATGCCTAACACCTTCCCCTCGAGGTAATTTGAACCCTTACCCTAA-TCTCTGGCTCGTTGACCTTAGTTAGACTTAATTAGGTTAGATAGGTGCCCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E745835" ref_strand="+" ref_description="SGN-E745835 [GI|47105035]">
      <seq>gagctttccattctcggtgaatctaatcctcacagggatcccttcttcggggacccattttgcatcaaacgatttcaacattgacctccattgtcgttacttgttggtttttcttttcacaatcgaatacccctaattctctgtactagtctctattcaattgggttttctatacttgtcaactgggtcgtcttctatttccactaggtcactctggttcttgaaatcttgggttcctgttatccctgtgaacttcatctttctgtaatggaaaattccattgttcttcatactggaaatcaattccaccccagcttaccctttttctcatttaggcccaaaaagttatctcgaattcatggctccagtagagagcaaatgtggaggatcaagcgcgttaaagcaacaggtgaaaattctggggaagctgcaagtgctgatgaatcggatgatgccttacaggttacaattgaaaagagcaaaaaggttttagccatgcaacaggacctacttcaacagattgcagaaagaagaaaagtagtctcttcaataaaaagcagtcttgccgatgctactggtacttatgatggtgggagtggtagcttatcagatgttgatatccctgacgtggataaagattataatgttactgtacctagtactgctgctactccaattactgatgtcgataaaaatacaccgcctgctataagccaagattttgttgaaagtaaaagagaagtcaaaagggacctggccgatgaaagggcacccccactttcaagatcatccatcacagccagtagccagacttcctctactgtaagttccaaaagaatattgaatgtccctccagaaactccgaagttcagtcaagagacacttttgaatgtgaattcgcgtaaaagtttagtcgatgttcctggaaagaagatccagtcttatatgccttcattatgtaaagaatcctcagcacaatcccttgtggaaaagaggaatgaaaatcttgaaggatcaagtgctgaggcaaacgaagagactgaagatcttgtgaatatagatgagaaacctcctccattggccggaacaaatgttatgaacattattttggtggcttcagaatgcgctccatggtctaaaacaggtgggcttggagatgttgctggagcattaccgaaagctttggctcgacgtggccacagagttatggttgtggcacctcgttatgacaactatcctgaacctcaagattctggtgtaagaaaaatttataaagttcatggtcaggatgtagaagtgacttacttccaagcttttattgatggtgtggattttgttttcattgacagccatatgtttagacacattgggaacaacatttacggagggaaccgtgtggatattttaaagcgcatggttttattttgcaaagcagcgattgaggttccttggcatgttccatgtggtggggtctgctatggagatggaaacttagtgttcattgctaatgattggcatactgctttattgccagtatatctgaaagcttattatcgtgacaatggaattatgaactatacaagatctgtcctggtgattcataacatcgctcatcagggtcgtggtcctttggaggatttttcatatgtagatcttccaccacactatatggaccctttcaaattgtatgacccagtaggaggtgagcatttcaacatttttgcggctggtctaaagacagcagatcgtgtagttacagttagtcatggatattcatgggaactcaagacttccgaaggtggttggggattgcatcagataattaatgagaacgattggaaattacggggtattgtgaatgggattgatacaaaagagtggaaccctgagttggacgttcacttacagtcagatggttacgtgaactactccttggacacactgcagactggcaagcctcaatgtaaagctgcattgcagaaggaacttggtttaccagttcgtgatgatgtcccactgattggtttcattgggaggcttgacccacaaaagggtgttgatctgattgctgaggcagtgccttggatgatgggtcaggatgtacaactggtcatgttgggtacggggaggcctgaccttgaacagatgctaaggcaatttgagtgtcaacacaatgataaaattagaggatgggttggtttctctgtgaagacttctcatcgtataactgctggtgcagacattctgctcatgccttctagatttgagccttgtggactgaaccagctttatgcaatgacatatgggactattcctgttgttcatgcagtaggaggactcagagatactgtgcagccctttgatccttttaatgagtcaggactggggtggaccttcagtagggctgaagctaaccagctgatccacgcattaggaaattgcttgctgacttatcgtgagtacaaaaagagttgggaggggattcagacgcgttgtatgacacaagacttaagttgggataatgctgctcagaactatgaagaagttctcattgctgctaagtatcagtggtgaggttcattacttgtagatatttgggggttttatcaagttccaatgatggcatttcagagacatgttactggtatcgccacgagaggatgcaacaagttggttaactatcatactactaccacgtcaggaatgattgccgcgcttgatcatataatcatgtatatactctattttgttagcaaaatgtagttacatgttgcaatttctactctatattttttggaagttttagttgtcaaataatcagccacctcaatttttgtttaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="+" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="15442" stop="66089"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15742" g_stop="16260" g_length="519"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="519" r_length="519" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16261" i_stop="16779" i_length="519">
            <donor d_prob="0.863" d_score="1.00"/>
            <acceptor a_prob="0.912" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16780" g_stop="17404" g_length="625"/>
          <reference_exon_boundary r_type="cDNA" r_start="520" r_stop="1144" r_length="625" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="17405" i_stop="18075" i_length="671">
            <donor d_prob="0.908" d_score="1.00"/>
            <acceptor a_prob="0.634" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="18076" g_stop="18140" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="1145" r_stop="1209" r_length="65" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="18141" i_stop="18541" i_length="401">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.761" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="18542" g_stop="18619" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="1210" r_stop="1287" r_length="78" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="18620" i_stop="18722" i_length="103">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.855" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="18723" g_stop="18833" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="1288" r_stop="1398" r_length="111" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="18834" i_stop="19276" i_length="443">
            <donor d_prob="0.913" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="19277" g_stop="19321" g_length="45"/>
          <reference_exon_boundary r_type="cDNA" r_start="1399" r_stop="1443" r_length="45" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="19322" i_stop="19588" i_length="267">
            <donor d_prob="0.958" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="19589" g_stop="19762" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="1444" r_stop="1617" r_length="174" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="19763" i_stop="20907" i_length="1145">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="20908" g_stop="22133" g_length="1226"/>
          <reference_exon_boundary r_type="cDNA" r_start="1618" r_stop="2843" r_length="1226" r_score="0.998"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="22134" i_stop="22955" i_length="822">
            <donor d_prob="0.000" d_score="0.96"/>
            <acceptor a_prob="0.666" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="22956" g_stop="22969" g_length="14"/>
          <reference_exon_boundary r_type="cDNA" r_start="2844" r_stop="2857" r_length="14" r_score="0.714"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="+" ref_id="SGN-E745835" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>2857</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E745835" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15742" e_stop="16260"/>
          <exon e_start="16780" e_stop="17404"/>
          <exon e_start="18076" e_stop="18140"/>
          <exon e_start="18542" e_stop="18619"/>
          <exon e_start="18723" e_stop="18833"/>
          <exon e_start="19277" e_stop="19321"/>
          <exon e_start="19589" e_stop="19762"/>
          <exon e_start="20908" e_stop="22133"/>
          <exon e_start="22956" e_stop="22969"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGCTTTCCATTCTCGGTGAATCTAATCCTCACAGGGATCCCTTCTTCGGGGACCCATTTTGCATCAAACGATTTCAACATTGACCTCCATTGTCGTTACTTGTTGGTTTTTCTTTTCACAATCGAATACCCCTAATTCTCTGTACTAGTCTCTATTCAATTGGGTTTTCTATACTTGTCAACTGGGTCGTCTTCTATTTCCACTAGGTCACTCTGGTTCTTGAAATCTTGGGTTCCTGTTATCCCTGTGAACTTCATCTTTCTGTAATGGAAAATTCCATTGTTCTTCATACTGGAAATCAATTCCACCCCAGCTTACCCTTTTTCTCATTTAGGCCCAAAAAGTTATCTCGAATTCATGGCTCCAGTAGAGAGCAAATGTGGAGGATCAAGCGCGTTAAAGCAACAGGTGAAAATTCTGGGGAAGCTGCAAGTGCTGATGAATCGGATGATGCCTTACAGGTTACAATTGAAAAGAGCAAAAAGGTTTTAGCCATGCAACAGGACCTACTTCAACAGGTAACCCTTTTGGTACTCAATCATAAAGTGAAAAGAAAGATTTCTTTTTCCAGGTCAGAAAGATAAAGAAGTAAAAGATGTACTTGTTTTAGGGCCTTTTGACTGTTTTTCCTTAAATGCGGATACAAGGGATATAATTATCATTATATATGCTAATAATGAATAGAAATCCTGATTTAAGATATTAGACATGTTCTAATTTCTGTAAACGAAACAATCGATTTTTTCAAGAATGTCAAATTTGAAAATGAATCTATGTTTAAATAACTTAGAAATCAGTATGATAGGACTGTTTTCTGAGAATTTGTTTCAGTATGTTGTGGATAAAGATTGTAACCATGTTCTGATTTAGAAGAGGAGAAGTTCGCCTGTAGGATGATTTGTTGCTGTAGTTCATATGTTTTTTTGTTGGTTTAATTGTCTTCCTGAGCATTGCATATGTTTCAGTTTGCAATTTATCATAGTGGGTTTAGAAACACTATTTACATTGTCTTCATCCTTGAATTCTTTGCATATTAGATTGCAGAAAGAAGAAAAGTAGTCTCTTCAATAAAAAGCAGTCTTGCCGATGCTACTGGTACTTATGATGGTGGGAGTGGTAGCTTATCAGATGTTGATATCCCTGACGTGGATAAAGATTATAATGTTACTGTACCTAGTACTGCTGCTACTCCAATTACTGATGTCGATAAAAATACACCGCCTGCTATAAGCCAAGATTTTGTTGAAAGTAAAAGAGAAGTCAAAAGGGACCTGGCCGATGAAAGGGCACCCCCACTTTCAAGATCATCCATCACAGCCAGTAGCCAGACTTCCTCTACTGTAAGTTCCAAAAGAATATTGAATGTCCCTCCAGAAACTCCGAAGTTCAGTCAAGAGACACTTTTGAATGTGAATTCGCGTAAAAGTTTAGTCGATGTTCCTGGAAAGAAGATCCAGTCTTATATGCCTTCATTATGTAAAGAATCCTCAGCACAATCCCTTGTGGAAAAGAGGAATGAAAATCTTGAAGGATCAAGTGCTGAGGCAAACGAAGAGACTGAAGATCTTGTGAATATAGATGAGAAACCTCCTCCATTGGCCGGAACAAATGTTATGAACATTATTTTGGTGGCTTCAGAATGCGCTCCATGGTCTAAAACAGGTATATTTTACACTGGATATGTATCTTCTGTCCAGGGACAAATGCGTAGGAACTGCAAAAGAGTAGGACCAGCATTCAGTACTCCTTCGTCTCTAGATAAACAAGATAATTAATTAGTAGAAGGATTAACATATTATCATACCTATCAAAAGTATTATATGACATTTCCTTAGTAATGTGATAAAAGGCATTTAAGAAAAATGAAAAAATATCACTGATCGTCCAATTGAAATGAAAGGGTGAACATCAAAAGAAAAAGGATCTATTATTATCATACCTATCAAAAGTATTATGTGACATTTTCTTAATAATGTGATAAAAGGCATTTAAGAAAAATGAAAAACCATCACTAATCGTCCAAAGTGAAACGAATAGGTGAATGTCAAAAGAAAAAAGATCTATATTTTATCCTGCCTTTCTTCACTAATGTAGTATTGTTGCCTTCTGAATGGTTGAGGATGGGTGGTGGATTTGTTGGTTTCTCAAACTTTGATTTTGTCTGTTGACTTTTCTGTTATCTTCATTTAAAAACTACTGAGCTCTGTGCACGTATATATAATCATGACTCGTACACATTTTTCGTACTTCGATGTTGCATGAATTTTAGTGTGTTTATGTCTCTCGTTTCATATTAGTGCAAGCATATCTTTTACTTGTGAAGAGTTTTTTAGGTGGGCTTGGAGATGTTGCTGGAGCATTACCGAAAGCTTTGGCTCGACGTGGCCACAGAGTTATGGTAAGTAGTTTAATCCTTCACCTTGTGAATTTCTGGATTCATAAGAAATGATGTATCAAGTAGAATGTAACTCAGAGAGAAATTGTCTATGAAGTCTGTTCTGCGCGAGGTGTTATATTCTCTACCCGTCGTCTTTTTAACCACTGGACTATTTATAGATTCACAAGCTTTCCAAAAGATATGCTGTCTAACCAGATTATCGACACCATATGAACCTCTTGCTAAATCATATCATATAATAATTTTTTTGTGACAATATTTATTTCTTTTTGACACATCAAACAGACAACTTTATACATTGCTTAGTATTTAAGAATTTTGCCTTCTCATTCCAAACACATGGGATGTAAGTTATCTGACGCTGAAGTTTCCTTTTCTCCCCCCATTTCCCTGAAACTTAGGTTGTGGCACCTCGTTATGACAACTATCCTGAACCTCAAGATTCTGGTGTAAGAAAAATTTATAAAGTTCATGGTCAGGTATGGTTAACTGCATCAATTAGATGCAGCTTTTAACTTATGCTTGTGATTTCATGGCCACAAGACTATCCATATCTAAGCATTTAAGTTTTGAACTGTGCAGGATGTAGAAGTGACTTACTTCCAAGCTTTTATTGATGGTGTGGATTTTGTTTTCATTGACAGCCATATGTTTAGACACATTGGGAACAACATTTACGGAGGGAACCGTGTGGTAAATCCCGGCGCTCACTTTTCTTCTGAATTTTTAGTTTCATTTTGATCCTGGAATTTCAAACTCCTTGATTTACATTGAAATCTATTAATGAGTCCTCTGTATAATTGCCTGACATAATGTTTTCCCTTGTCACAAAATCTGGGCCTTATGGGATTGGGATGTCTTAGATGATTTTGTCTTCACTTTTCCTTTCTCTTTCTGGGTGGGGAGTTTAAGAGAGAGAGGTTTAAAATGATTTTCTGTACAAACAAGAAGACTGTGATAACGATCCCTTTGGTGAGCTCTGGTATTGACTTTGAGCTACCTTCTTTGCATTGTACATCATTCATTGATGTATCAGTCTTGAAGCTTTATTTGAATTGTTTATCCCCTTCTCATAAATAGTTTTGGCGGTACCTATCTGGCTGTTTTTAACTTCTTTTTTTCTCTTCCTGTTGCAGGATATTTTAAAGCGCATGGTTTTATTTTGCAAAGCAGCGATTGAGGTATGATTTCTGATGTTTCAGGAACCTTGCACTAATTATTGACCAATTGCTCCCTACACTATCTGTCTACGATACGCCACAGTGGCCAGAAAAAAGACTCTGCAAACCTTAAATCAATCTTTGTAACCAACACTGTAAAATAAACCTAGCCATTCTATTTGGGCATGATTATCCATGTTTACTTCATACCTGCACACCCTGTTGTAACATTTTGCCCACTACTATTGCATTGATTTCAAAATACATTTTACTGATTCACAATTTCAGGTTCCTTGGCATGTTCCATGTGGTGGGGTCTGCTATGGAGATGGAAACTTAGTGTTCATTGCTAATGATTGGCATACTGCTTTATTGCCAGTATATCTGAAAGCTTATTATCGTGACAATGGAATTATGAACTATACAAGATCTGTCCTGGTGATTCATAACATCGCTCATCAGGTCAGTTTCATCAGCAACTAAAGCAGTTTTCTAATCCACCTGTGCATTTTTATTTCCAATAATTTAGCAGTATAGCCATTTTTTAAGTTCCAAAGGTTGGTCGTATATCATGATTTCTATGACTTCTAAGCATAAGATTTAAAATAAATGATTACCTTGATAGGTAAACCGATGGGTGGGGCCCATCATCCACTGAGTTTTGAACTGTGGAGGCCTCGAAAATTTCTCGGTTATCAAAATAATTTAATAACGATGACTAGTTTGATATTATATATCTACTAGGTGTTCGTGGGATAATTATTACTTCCGCGTCACTAAGTTCAATAGCTTAGGTACCCACTGAGAGTACCATATCAGGCTATCAATAAATCTAGTTACAGGTAAAGCATTTTTTATCATGCACAGACCATACTCAGACTTGTTTAGGAGTATTGCCTGATAAGTGAAATTCTTTGAAAAGTTGTTTTCTCATCTCTGTGCGTGAGCCGGTTGAAGAATATGCTTTTTAAGCTTCATACTGGATTATGCTTTGATTTGTAATGATCTACCACAATATGAGATCAACCCCACAAAAAACAAAAGAAAATCTCGAAGAAGTTACCAAAGATATGTCGTACATGAAGTCTTATATTAGCAATGTACAACTCTACCTTTTCCTCATGTGCTAAGGTTAAGCACACTGATGCATTTTGCTTCTACTACTAGTTATCATCTTTTTATTAAATTTTTTCTTGCCTCATTTGATATGTATCTGAATACAACTTTCTTTTTATAATGAATTTTCTTCATGAAAGTTACAAAGAGCGCTGTGGAGTGAGCCAAGATTTTATGCATGTAATGTAAGCAGCAGAGAACTAGAAATACTATGTTCGTCCAATTAAACATGACCTACTTTGACCTGTGCAATTGTTTTCAAATATCTGGTAGATTATAACTTTTAAGTATAATGTGAAGAGTGTAAAATAATAATTTGGAATATAAAACAGTAGAGTAATTGGAGTTATCTCTATCCAAGTTCTGTATTTTGTTAGTATTTTCTGATTTTTGTCATTTATTTTATCTTTTTGTAACGTGAATAAGGGTTATAGCAATCTTAGCCAGCTTTCTATCATTTTCAGCTCTATAATTTGTTCCATCTCATGCAGGGTCGTGGTCCTTTGGAGGATTTTTCATATGTAGATCTTCCACCACACTATATGGACCCTTTCAAATTGTATGACCCAGTAGGAGGTGAGCATTTCAACATTTTTGCGGCTGGTCTAAAGACAGCAGATCGTGTAGTTACAGTTAGTCATGGATATTCATGGGAACTCAAGACTTCCGAAGGTGGTTGGGGATTGCATCAGATAATTAATGAGAACGATTGGAAATTACGGGGTATTGTGAATGGGATTGATACAAAAGAGTGGAACCCTGAGTTGGACGTTCACTTACAGTCAGATGGTTACGTGAACTACTCCTTGGACACACTGCAGACTGGCAAGCCTCAATGTAAAGCTGCATTGCAGAAGGAACTTGGTTTACCAGTTCGTGATGATGTCCCACTGATTGGTTTCATTGGGAGGCTTGACCCACAAAAGGGTGTTGATCTGATTGCTGAGGCAGTGCCTTGGATGATGGGTCAGGATGTACAACTGGTCATGTTGGGTACGGGGAGGCCTGACCTTGAACAGATGCTAAGGCAATTTGAGTGTCAACACAATGATAAAATTAGAGGATGGGTTGGTTTCTCTGTGAAGACTTCTCATCGTATAACTGCTGGTGCAGACATTCTGCTCATGCCTTCTAGATTTGAGCCTTGTGGACTGAACCAGCTTTATGCAATGACATATGGGACTATTCCTGTTGTTCATGCAGTAGGAGGACTCAGAGATACTGTGCAGCCCTTTGATCCTTTTAATGAGTCAGGACTGGGGTGGACCTTCAGTAGGGCTGAAGCTAACCAGCTGATCCACGCATTAGGAAATTGCTTGCTGACTTATCGTGAGTACAAAAAGAGTTGGGAGGGGATTCAGACGCGTTGTATGACACAAGACTTAAGTTGGGATAATGCTGCTCAGAACTATGAAGAAGTTCTCATTGCTGCTAAGTATCAGTGGTGAGGTTCATTACTTGTAGATATTTGGGGGTTTTATCAAGTTCCAATGATGGCATTTCAGAGACATGTTACTGGTATCGCCACGAGAGGATGCAACAAGTTGGTTAACTATCATACTACTACCACGTCAGGAATGATTGCCGCGCTTGATCATATAATCATGTATATACTCTATTTTGTTAGCAAAATGTAGTTACATGTTGCAATTTCTACTCTATATTTTTTGGAAGTTTTAGTTGTCAAATAATCAGCCACCTCAATTTTTGTTTAGATGTATTCTCTCTCAATAATAAAATTGACCGACTCATCTAAACCACAATCAATCACTTCTGATGCTTTCCTTCAAGTAAAGCTTTTAGCGGACAATTGTTTCATATTGACAGTTCTCATGAGATCCACTAGCAGTATCCGTATTTATAAGAAGGAAAAAGTCTGATAATGCCATTGTGATTCATATATATTAGTGTTATCTTAAATGACTCATAATATTTTATTTTTTTTCTAATGGAAGTGATTTATTTTTAAAAAATAAATATAATTCATATGAGTACATTTAATCATTTTCGCACATTTTTTGACTTTTTTTTAATCTCTATGACAAATTTAAATTTTATTATTTTGCTAGTTAAATTTATTTATGTTTCATTAATTTTCTTGTAAAATTTATCATAGATGTTTTTTTTCAAATACAAAAAAATAAACTAGAGTAAGCCGAAAAAATAGTTTTAAATTATAATTAGCCACAGAAAAACAGTTTTAAAAATTTCTTCACGAATGAAAGAAAAAAATAAAATATAAATAAACAACTTTAATTATGATAATCAAAGAAGTAAAAAAAATTATGTATGAGAAGGATCTTATACATCACTACATGATTTTTTCTTTTTTAAAAAAATAGAAGTAAAAAGTTTGAAAATTATATCAAACGTTTTTCCCTTACTATAATACTACATACTTTACATCAAACAGGAAAACCTATTTATATATAATTTCTTATTATAAAAATCCTATTTAGACATGAATAAACAACTTCAGCCGTCCCTATTTACTTGTTCAACATTTTTTTTAATTGTCCTTATTTACTTGTCTATTTAGACAAATCAAAAAAG</genome_strand>
        <mrna_strand>GAGCTTTCCATTCTCGGTGAATCTAATCCTCACAGGGATCCCTTCTTCGGGGACCCATTTTGCATCAAACGATTTCAACATTGACCTCCATTGTCGTTACTTGTTGGTTTTTCTTTTCACAATCGAATACCCCTAATTCTCTGTACTAGTCTCTATTCAATTGGGTTTTCTATACTTGTCAACTGGGTCGTCTTCTATTTCCACTAGGTCACTCTGGTTCTTGAAATCTTGGGTTCCTGTTATCCCTGTGAACTTCATCTTTCTGTAATGGAAAATTCCATTGTTCTTCATACTGGAAATCAATTCCACCCCAGCTTACCCTTTTTCTCATTTAGGCCCAAAAAGTTATCTCGAATTCATGGCTCCAGTAGAGAGCAAATGTGGAGGATCAAGCGCGTTAAAGCAACAGGTGAAAATTCTGGGGAAGCTGCAAGTGCTGATGAATCGGATGATGCCTTACAGGTTACAATTGAAAAGAGCAAAAAGGTTTTAGCCATGCAACAGGACCTACTTCAACAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCAGAAAGAAGAAAAGTAGTCTCTTCAATAAAAAGCAGTCTTGCCGATGCTACTGGTACTTATGATGGTGGGAGTGGTAGCTTATCAGATGTTGATATCCCTGACGTGGATAAAGATTATAATGTTACTGTACCTAGTACTGCTGCTACTCCAATTACTGATGTCGATAAAAATACACCGCCTGCTATAAGCCAAGATTTTGTTGAAAGTAAAAGAGAAGTCAAAAGGGACCTGGCCGATGAAAGGGCACCCCCACTTTCAAGATCATCCATCACAGCCAGTAGCCAGACTTCCTCTACTGTAAGTTCCAAAAGAATATTGAATGTCCCTCCAGAAACTCCGAAGTTCAGTCAAGAGACACTTTTGAATGTGAATTCGCGTAAAAGTTTAGTCGATGTTCCTGGAAAGAAGATCCAGTCTTATATGCCTTCATTATGTAAAGAATCCTCAGCACAATCCCTTGTGGAAAAGAGGAATGAAAATCTTGAAGGATCAAGTGCTGAGGCAAACGAAGAGACTGAAGATCTTGTGAATATAGATGAGAAACCTCCTCCATTGGCCGGAACAAATGTTATGAACATTATTTTGGTGGCTTCAGAATGCGCTCCATGGTCTAAAACAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGGCTTGGAGATGTTGCTGGAGCATTACCGAAAGCTTTGGCTCGACGTGGCCACAGAGTTATG.................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTGGCACCTCGTTATGACAACTATCCTGAACCTCAAGATTCTGGTGTAAGAAAAATTTATAAAGTTCATGGTCAG.......................................................................................................GATGTAGAAGTGACTTACTTCCAAGCTTTTATTGATGGTGTGGATTTTGTTTTCATTGACAGCCATATGTTTAGACACATTGGGAACAACATTTACGGAGGGAACCGTGTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................GATATTTTAAAGCGCATGGTTTTATTTTGCAAAGCAGCGATTGAG...........................................................................................................................................................................................................................................................................GTTCCTTGGCATGTTCCATGTGGTGGGGTCTGCTATGGAGATGGAAACTTAGTGTTCATTGCTAATGATTGGCATACTGCTTTATTGCCAGTATATCTGAAAGCTTATTATCGTGACAATGGAATTATGAACTATACAAGATCTGTCCTGGTGATTCATAACATCGCTCATCAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTCGTGGTCCTTTGGAGGATTTTTCATATGTAGATCTTCCACCACACTATATGGACCCTTTCAAATTGTATGACCCAGTAGGAGGTGAGCATTTCAACATTTTTGCGGCTGGTCTAAAGACAGCAGATCGTGTAGTTACAGTTAGTCATGGATATTCATGGGAACTCAAGACTTCCGAAGGTGGTTGGGGATTGCATCAGATAATTAATGAGAACGATTGGAAATTACGGGGTATTGTGAATGGGATTGATACAAAAGAGTGGAACCCTGAGTTGGACGTTCACTTACAGTCAGATGGTTACGTGAACTACTCCTTGGACACACTGCAGACTGGCAAGCCTCAATGTAAAGCTGCATTGCAGAAGGAACTTGGTTTACCAGTTCGTGATGATGTCCCACTGATTGGTTTCATTGGGAGGCTTGACCCACAAAAGGGTGTTGATCTGATTGCTGAGGCAGTGCCTTGGATGATGGGTCAGGATGTACAACTGGTCATGTTGGGTACGGGGAGGCCTGACCTTGAACAGATGCTAAGGCAATTTGAGTGTCAACACAATGATAAAATTAGAGGATGGGTTGGTTTCTCTGTGAAGACTTCTCATCGTATAACTGCTGGTGCAGACATTCTGCTCATGCCTTCTAGATTTGAGCCTTGTGGACTGAACCAGCTTTATGCAATGACATATGGGACTATTCCTGTTGTTCATGCAGTAGGAGGACTCAGAGATACTGTGCAGCCCTTTGATCCTTTTAATGAGTCAGGACTGGGGTGGACCTTCAGTAGGGCTGAAGCTAACCAGCTGATCCACGCATTAGGAAATTGCTTGCTGACTTATCGTGAGTACAAAAAGAGTTGGGAGGGGATTCAGACGCGTTGTATGACACAAGACTTAAGTTGGGATAATGCTGCTCAGAACTATGAAGAAGTTCTCATTGCTGCTAAGTATCAGTGGTGAGGTTCATTACTTGTAGATATTTGGGGGTTTTATCAAGTTCCAATGATGGCATTTCAGAGACATGTTACTGGTATCGCCACGAGAGGATGCAACAAGTTGGTTAACTATCATACTACTACCACGTCAGGAATGATTGCCGCGCTTGATCATATAATCATGTATATACTCTATTTTGTTAGCAAAATGTAGTTACATGTTGCAATTTCTACTCTATATTTTTTGGAAGTTTTAGTTGTCAAATAATCAGCCACCTCAATTTTTGTTTAAAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E553519" ref_strand="+" ref_description="SGN-E553519 [cTSC-1-F8]">
      <seq>gtgaatctaatcctcacagggatcccttcttcggggacccattttgcatcaaacgatttcaacattgacctccattgtcgttacttgttggtttttcttttcacaatcgaatacccctaattctctgtactagtctctattcaattgggttttctatacttgtcaactgggtcgtcttctatttccactaggtcactctggttcttgaaatcttgggttcctgttatccctgtgaacttcatctttctgtaatggaaaattccattgttcttcatactggaaatcaattccaccccagcttaccctttttctcatttaggcccaaaaagttatctcgaattcatggctccagtagagagcaaatgtggaggatcaagcgcgttaaagcaacaggtgaaaattctggggaagctgcaagtgctgatgaatcggatgatgccttacaggttacaattgaaaagagcaaaaaggttttagccatgcaacaggacctacttcaacagattgcagaaagaagaaaagtagtctcttcaataaaaagcagtcttgccgatgctactggtacttatgatggtgggagtggtagcttatcagatgttgatatccctgacgtggataaagattataatgttactgtacctagtactgctgctactccaattactgatgtcgataaaaatacaccgcctgctataagccaagattttgttgaaagtaaaagagaaatcaaaagggacctggccgatgaaagggcacccccactttcaagatcatccatcac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="+" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="15458" stop="17357"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15758" g_stop="16260" g_length="503"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="503" r_length="503" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16261" i_stop="16779" i_length="519">
            <donor d_prob="0.863" d_score="1.00"/>
            <acceptor a_prob="0.912" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16780" g_stop="17057" g_length="278"/>
          <reference_exon_boundary r_type="cDNA" r_start="504" r_stop="781" r_length="278" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="+" ref_id="SGN-E553519" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>781</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E553519" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15758" e_stop="16260"/>
          <exon e_start="16780" e_stop="17057"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGAATCTAATCCTCACAGGGATCCCTTCTTCGGGGACCCATTTTGCATCAAACGATTTCAACATTGACCTCCATTGTCGTTACTTGTTGGTTTTTCTTTTCACAATCGAATACCCCTAATTCTCTGTACTAGTCTCTATTCAATTGGGTTTTCTATACTTGTCAACTGGGTCGTCTTCTATTTCCACTAGGTCACTCTGGTTCTTGAAATCTTGGGTTCCTGTTATCCCTGTGAACTTCATCTTTCTGTAATGGAAAATTCCATTGTTCTTCATACTGGAAATCAATTCCACCCCAGCTTACCCTTTTTCTCATTTAGGCCCAAAAAGTTATCTCGAATTCATGGCTCCAGTAGAGAGCAAATGTGGAGGATCAAGCGCGTTAAAGCAACAGGTGAAAATTCTGGGGAAGCTGCAAGTGCTGATGAATCGGATGATGCCTTACAGGTTACAATTGAAAAGAGCAAAAAGGTTTTAGCCATGCAACAGGACCTACTTCAACAGGTAACCCTTTTGGTACTCAATCATAAAGTGAAAAGAAAGATTTCTTTTTCCAGGTCAGAAAGATAAAGAAGTAAAAGATGTACTTGTTTTAGGGCCTTTTGACTGTTTTTCCTTAAATGCGGATACAAGGGATATAATTATCATTATATATGCTAATAATGAATAGAAATCCTGATTTAAGATATTAGACATGTTCTAATTTCTGTAAACGAAACAATCGATTTTTTCAAGAATGTCAAATTTGAAAATGAATCTATGTTTAAATAACTTAGAAATCAGTATGATAGGACTGTTTTCTGAGAATTTGTTTCAGTATGTTGTGGATAAAGATTGTAACCATGTTCTGATTTAGAAGAGGAGAAGTTCGCCTGTAGGATGATTTGTTGCTGTAGTTCATATGTTTTTTTGTTGGTTTAATTGTCTTCCTGAGCATTGCATATGTTTCAGTTTGCAATTTATCATAGTGGGTTTAGAAACACTATTTACATTGTCTTCATCCTTGAATTCTTTGCATATTAGATTGCAGAAAGAAGAAAAGTAGTCTCTTCAATAAAAAGCAGTCTTGCCGATGCTACTGGTACTTATGATGGTGGGAGTGGTAGCTTATCAGATGTTGATATCCCTGACGTGGATAAAGATTATAATGTTACTGTACCTAGTACTGCTGCTACTCCAATTACTGATGTCGATAAAAATACACCGCCTGCTATAAGCCAAGATTTTGTTGAAAGTAAAAGAGAAGTCAAAAGGGACCTGGCCGATGAAAGGGCACCCCCACTTTCAAGATCATCCATCAC</genome_strand>
        <mrna_strand>GTGAATCTAATCCTCACAGGGATCCCTTCTTCGGGGACCCATTTTGCATCAAACGATTTCAACATTGACCTCCATTGTCGTTACTTGTTGGTTTTTCTTTTCACAATCGAATACCCCTAATTCTCTGTACTAGTCTCTATTCAATTGGGTTTTCTATACTTGTCAACTGGGTCGTCTTCTATTTCCACTAGGTCACTCTGGTTCTTGAAATCTTGGGTTCCTGTTATCCCTGTGAACTTCATCTTTCTGTAATGGAAAATTCCATTGTTCTTCATACTGGAAATCAATTCCACCCCAGCTTACCCTTTTTCTCATTTAGGCCCAAAAAGTTATCTCGAATTCATGGCTCCAGTAGAGAGCAAATGTGGAGGATCAAGCGCGTTAAAGCAACAGGTGAAAATTCTGGGGAAGCTGCAAGTGCTGATGAATCGGATGATGCCTTACAGGTTACAATTGAAAAGAGCAAAAAGGTTTTAGCCATGCAACAGGACCTACTTCAACAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCAGAAAGAAGAAAAGTAGTCTCTTCAATAAAAAGCAGTCTTGCCGATGCTACTGGTACTTATGATGGTGGGAGTGGTAGCTTATCAGATGTTGATATCCCTGACGTGGATAAAGATTATAATGTTACTGTACCTAGTACTGCTGCTACTCCAATTACTGATGTCGATAAAAATACACCGCCTGCTATAAGCCAAGATTTTGTTGAAAGTAAAAGAGAAATCAAAAGGGACCTGGCCGATGAAAGGGCACCCCCACTTTCAAGATCATCCATCAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E325335" ref_strand="+" ref_description="SGN-E325335 [cTOC-1-F18]">
      <seq>ttaatcctcacagggatcccttcttcggggacccattttgcatcaaacgatttcaacattgacctcattgcgtacttgtggttttcttttcacaatcgaatacccctaattctctgtctagtcttattcaattgggttttctatacttgtcaactgggtcgctttatttccactaggtcactctggttcttgaaatcttgggttcctgttatccctgtgaacttcatctttctgtaatggaaaattccattgttcttcatactggaaatcaattccaccccagcttaccctttttctcatttaggcccaaaaagttatctcgaattcatggctccagtagagagcaaatgtggaggatcaagcgcgttaaagcaacaggtgaaaattctggggaagctgcaagtgctgatgaatcggatgatgccttacaggttacaattgaaaagagcaaaaaggttttagccatgcaacaggacctacttcaacagattgcagaaagaagaaaagtagtctcttcaataaaaagcagtcttgccgatgctactggtacttatga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="+" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="15465" stop="17147"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15764" g_stop="16260" g_length="497"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="488" r_length="488" r_score="0.980"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16261" i_stop="16779" i_length="519">
            <donor d_prob="0.863" d_score="1.00"/>
            <acceptor a_prob="0.912" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16780" g_stop="16847" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="489" r_stop="556" r_length="68" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="+" ref_id="SGN-E325335" ref_strand="+">
        <total_alignment_score>0.982</total_alignment_score>
        <cumulative_length_of_scored_exons>565</cumulative_length_of_scored_exons>
        <coverage percentage="1.016" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E325335" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15764" e_stop="16260"/>
          <exon e_start="16780" e_stop="16847"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTAATCCTCACAGGGATCCCTTCTTCGGGGACCCATTTTGCATCAAACGATTTCAACATTGACCTCCATTGTCGTTACTTGTTGGTTTTTCTTTTCACAATCGAATACCCCTAATTCTCTGTACTAGTCTCTATTCAATTGGGTTTTCTATACTTGTCAACTGGGTCGTCTTCTATTTCCACTAGGTCACTCTGGTTCTTGAAATCTTGGGTTCCTGTTATCCCTGTGAACTTCATCTTTCTGTAATGGAAAATTCCATTGTTCTTCATACTGGAAATCAATTCCACCCCAGCTTACCCTTTTTCTCATTTAGGCCCAAAAAGTTATCTCGAATTCATGGCTCCAGTAGAGAGCAAATGTGGAGGATCAAGCGCGTTAAAGCAACAGGTGAAAATTCTGGGGAAGCTGCAAGTGCTGATGAATCGGATGATGCCTTACAGGTTACAATTGAAAAGAGCAAAAAGGTTTTAGCCATGCAACAGGACCTACTTCAACAGGTAACCCTTTTGGTACTCAATCATAAAGTGAAAAGAAAGATTTCTTTTTCCAGGTCAGAAAGATAAAGAAGTAAAAGATGTACTTGTTTTAGGGCCTTTTGACTGTTTTTCCTTAAATGCGGATACAAGGGATATAATTATCATTATATATGCTAATAATGAATAGAAATCCTGATTTAAGATATTAGACATGTTCTAATTTCTGTAAACGAAACAATCGATTTTTTCAAGAATGTCAAATTTGAAAATGAATCTATGTTTAAATAACTTAGAAATCAGTATGATAGGACTGTTTTCTGAGAATTTGTTTCAGTATGTTGTGGATAAAGATTGTAACCATGTTCTGATTTAGAAGAGGAGAAGTTCGCCTGTAGGATGATTTGTTGCTGTAGTTCATATGTTTTTTTGTTGGTTTAATTGTCTTCCTGAGCATTGCATATGTTTCAGTTTGCAATTTATCATAGTGGGTTTAGAAACACTATTTACATTGTCTTCATCCTTGAATTCTTTGCATATTAGATTGCAGAAAGAAGAAAAGTAGTCTCTTCAATAAAAAGCAGTCTTGCCGATGCTACTGGTACTTATGA</genome_strand>
        <mrna_strand>TTAATCCTCACAGGGATCCCTTCTTCGGGGACCCATTTTGCATCAAACGATTTCAACATTGACCT-CATTG-CG-TACTTG-TGGTTTT-CTTTTCACAATCGAATACCCCTAATTCTCTGT-CTAGTCT-TATTCAATTGGGTTTTCTATACTTGTCAACTGGGTCG-CTT-TATTTCCACTAGGTCACTCTGGTTCTTGAAATCTTGGGTTCCTGTTATCCCTGTGAACTTCATCTTTCTGTAATGGAAAATTCCATTGTTCTTCATACTGGAAATCAATTCCACCCCAGCTTACCCTTTTTCTCATTTAGGCCCAAAAAGTTATCTCGAATTCATGGCTCCAGTAGAGAGCAAATGTGGAGGATCAAGCGCGTTAAAGCAACAGGTGAAAATTCTGGGGAAGCTGCAAGTGCTGATGAATCGGATGATGCCTTACAGGTTACAATTGAAAAGAGCAAAAAGGTTTTAGCCATGCAACAGGACCTACTTCAACAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCAGAAAGAAGAAAAGTAGTCTCTTCAATAAAAAGCAGTCTTGCCGATGCTACTGGTACTTATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E316455" ref_strand="+" ref_description="SGN-E316455 [cTOA-25-L18]">
      <seq>gatcccttcttcggggacccattttgcatcaaacgatttcaacattgacctccattgtcgttacttgttggtttttcttttcacaatcgaatacccctaattctctgtactagtctctattcaattgggttttctatacttgtcaactgggtcgtcttctatttccactaggtcactctggttcttgaaatcttgggttcctgttatccctgtgaacttcatctttctgtaatggaaaattccattgttcttcatactggaaatcaattccaccccagcttaccctttttctcatttaggcccaaaaagttatctcgaattcatggctccagtagagagcaaatgtggaggatcaagcgcgttaaagcaacaggtgaaaattctggggaagctgcaagtgctgatgaatcggatgatgccttacaggttacaattgaaaagagcaaaaaggttttagccatgcaacaggacctacttcaacagattgcagaaagaagaaaagtagtctcttcaataaaaagcagtcttgccgatgctactggtacttatgatggtgggagtggtagcttatcagatgttgatatccctgacgtggataaagattataatgttactgtacctagtactgctgctactccaattactgatgtcgataaaatacaccgcctgcta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="+" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="15478" stop="17269"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15778" g_stop="16260" g_length="483"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="483" r_length="483" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16261" i_stop="16779" i_length="519">
            <donor d_prob="0.863" d_score="1.00"/>
            <acceptor a_prob="0.912" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16780" g_stop="16969" g_length="190"/>
          <reference_exon_boundary r_type="cDNA" r_start="484" r_stop="672" r_length="189" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="+" ref_id="SGN-E316455" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>673</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E316455" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15778" e_stop="16260"/>
          <exon e_start="16780" e_stop="16969"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATCCCTTCTTCGGGGACCCATTTTGCATCAAACGATTTCAACATTGACCTCCATTGTCGTTACTTGTTGGTTTTTCTTTTCACAATCGAATACCCCTAATTCTCTGTACTAGTCTCTATTCAATTGGGTTTTCTATACTTGTCAACTGGGTCGTCTTCTATTTCCACTAGGTCACTCTGGTTCTTGAAATCTTGGGTTCCTGTTATCCCTGTGAACTTCATCTTTCTGTAATGGAAAATTCCATTGTTCTTCATACTGGAAATCAATTCCACCCCAGCTTACCCTTTTTCTCATTTAGGCCCAAAAAGTTATCTCGAATTCATGGCTCCAGTAGAGAGCAAATGTGGAGGATCAAGCGCGTTAAAGCAACAGGTGAAAATTCTGGGGAAGCTGCAAGTGCTGATGAATCGGATGATGCCTTACAGGTTACAATTGAAAAGAGCAAAAAGGTTTTAGCCATGCAACAGGACCTACTTCAACAGGTAACCCTTTTGGTACTCAATCATAAAGTGAAAAGAAAGATTTCTTTTTCCAGGTCAGAAAGATAAAGAAGTAAAAGATGTACTTGTTTTAGGGCCTTTTGACTGTTTTTCCTTAAATGCGGATACAAGGGATATAATTATCATTATATATGCTAATAATGAATAGAAATCCTGATTTAAGATATTAGACATGTTCTAATTTCTGTAAACGAAACAATCGATTTTTTCAAGAATGTCAAATTTGAAAATGAATCTATGTTTAAATAACTTAGAAATCAGTATGATAGGACTGTTTTCTGAGAATTTGTTTCAGTATGTTGTGGATAAAGATTGTAACCATGTTCTGATTTAGAAGAGGAGAAGTTCGCCTGTAGGATGATTTGTTGCTGTAGTTCATATGTTTTTTTGTTGGTTTAATTGTCTTCCTGAGCATTGCATATGTTTCAGTTTGCAATTTATCATAGTGGGTTTAGAAACACTATTTACATTGTCTTCATCCTTGAATTCTTTGCATATTAGATTGCAGAAAGAAGAAAAGTAGTCTCTTCAATAAAAAGCAGTCTTGCCGATGCTACTGGTACTTATGATGGTGGGAGTGGTAGCTTATCAGATGTTGATATCCCTGACGTGGATAAAGATTATAATGTTACTGTACCTAGTACTGCTGCTACTCCAATTACTGATGTCGATAAAAATACACCGCCTGCTA</genome_strand>
        <mrna_strand>GATCCCTTCTTCGGGGACCCATTTTGCATCAAACGATTTCAACATTGACCTCCATTGTCGTTACTTGTTGGTTTTTCTTTTCACAATCGAATACCCCTAATTCTCTGTACTAGTCTCTATTCAATTGGGTTTTCTATACTTGTCAACTGGGTCGTCTTCTATTTCCACTAGGTCACTCTGGTTCTTGAAATCTTGGGTTCCTGTTATCCCTGTGAACTTCATCTTTCTGTAATGGAAAATTCCATTGTTCTTCATACTGGAAATCAATTCCACCCCAGCTTACCCTTTTTCTCATTTAGGCCCAAAAAGTTATCTCGAATTCATGGCTCCAGTAGAGAGCAAATGTGGAGGATCAAGCGCGTTAAAGCAACAGGTGAAAATTCTGGGGAAGCTGCAAGTGCTGATGAATCGGATGATGCCTTACAGGTTACAATTGAAAAGAGCAAAAAGGTTTTAGCCATGCAACAGGACCTACTTCAACAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCAGAAAGAAGAAAAGTAGTCTCTTCAATAAAAAGCAGTCTTGCCGATGCTACTGGTACTTATGATGGTGGGAGTGGTAGCTTATCAGATGTTGATATCCCTGACGTGGATAAAGATTATAATGTTACTGTACCTAGTACTGCTGCTACTCCAATTACTGATGTCGAT-AAAATACACCGCCTGCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E469003" ref_strand="+" ref_description="SGN-E469003 [cSTB-10-I15]">
      <seq>tttacttgtcaattatctctactgggtcggcttctatttccactaggtcactctggttcttgaaatcttggattcctattatccctgtgaacttcatcttttgtgatttctactgtaatggagaattccattcttcttcatagtggaaatcagttccaccccaacttaccccttttagcacttaggcccaaaaaattatctctaattcatggctccagtagagagcaaatgtggaggatcaagcgcgttaaagcaacaggtgaaaattctggggaagctgcaagtgctgatgaatcgaatgatgccttacaggttacaattgaaaagagcaaaaaggttttagccatgcaacatgacctacttcaacagattgcagaaagaagaaaagtagtctcttcaataaaaagcagtcttgccaatgccaaaggtacttatgatggtgggagtggtagcttatcagatgttgatatccctgacgtggataaagattataatgttactgtacctagtactgctgctactccaattactgatgtcgataaaaata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="+" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="15607" stop="17257"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15902" g_stop="16260" g_length="359"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="369" r_length="369" r_score="0.866"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16261" i_stop="16779" i_length="519">
            <donor d_prob="0.863" d_score="0.98"/>
            <acceptor a_prob="0.912" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16780" g_stop="16957" g_length="178"/>
          <reference_exon_boundary r_type="cDNA" r_start="370" r_stop="547" r_length="178" r_score="0.978"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="+" ref_id="SGN-E469003" ref_strand="+">
        <total_alignment_score>0.903</total_alignment_score>
        <cumulative_length_of_scored_exons>537</cumulative_length_of_scored_exons>
        <coverage percentage="0.982" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E469003" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15902" e_stop="16260"/>
          <exon e_start="16780" e_stop="16957"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGGGTTTTCTATACTTGTCAACTGGGTCGTCTTCTATTTCCACTAGGTCACTCTGGTTCTTGAAATCTTGGGTTCCTGTTATCCCTGTGAACTTCATC-TT-------TCT---GTAATGGAAAATTCCATTGTTCTTCATACTGGAAATCAATTCCACCCCAGCTTACCCTTTTTCTCATTTAGGCCCAAAAAGTTATCTCGAATTCATGGCTCCAGTAGAGAGCAAATGTGGAGGATCAAGCGCGTTAAAGCAACAGGTGAAAATTCTGGGGAAGCTGCAAGTGCTGATGAATCGGATGATGCCTTACAGGTTACAATTGAAAAGAGCAAAAAGGTTTTAGCCATGCAACAGGACCTACTTCAACAGGTAACCCTTTTGGTACTCAATCATAAAGTGAAAAGAAAGATTTCTTTTTCCAGGTCAGAAAGATAAAGAAGTAAAAGATGTACTTGTTTTAGGGCCTTTTGACTGTTTTTCCTTAAATGCGGATACAAGGGATATAATTATCATTATATATGCTAATAATGAATAGAAATCCTGATTTAAGATATTAGACATGTTCTAATTTCTGTAAACGAAACAATCGATTTTTTCAAGAATGTCAAATTTGAAAATGAATCTATGTTTAAATAACTTAGAAATCAGTATGATAGGACTGTTTTCTGAGAATTTGTTTCAGTATGTTGTGGATAAAGATTGTAACCATGTTCTGATTTAGAAGAGGAGAAGTTCGCCTGTAGGATGATTTGTTGCTGTAGTTCATATGTTTTTTTGTTGGTTTAATTGTCTTCCTGAGCATTGCATATGTTTCAGTTTGCAATTTATCATAGTGGGTTTAGAAACACTATTTACATTGTCTTCATCCTTGAATTCTTTGCATATTAGATTGCAGAAAGAAGAAAAGTAGTCTCTTCAATAAAAAGCAGTCTTGCCGATGCTACTGGTACTTATGATGGTGGGAGTGGTAGCTTATCAGATGTTGATATCCCTGACGTGGATAAAGATTATAATGTTACTGTACCTAGTACTGCTGCTACTCCAATTACTGATGTCGATAAAAATA</genome_strand>
        <mrna_strand>TTTACTTGTCAAT-TATCTCTACTGGGTCGGCTTCTATTTCCACTAGGTCACTCTGGTTCTTGAAATCTTGGATTCCTATTATCCCTGTGAACTTCATCTTTTGTGATTTCTACTGTAATGGAGAATTCCATTCTTCTTCATAGTGGAAATCAGTTCCACCCCAACTTACCCCTTTTAGCACTTAGGCCCAAAAAATTATCTCTAATTCATGGCTCCAGTAGAGAGCAAATGTGGAGGATCAAGCGCGTTAAAGCAACAGGTGAAAATTCTGGGGAAGCTGCAAGTGCTGATGAATCGAATGATGCCTTACAGGTTACAATTGAAAAGAGCAAAAAGGTTTTAGCCATGCAACATGACCTACTTCAACAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCAGAAAGAAGAAAAGTAGTCTCTTCAATAAAAAGCAGTCTTGCCAATGCCAAAGGTACTTATGATGGTGGGAGTGGTAGCTTATCAGATGTTGATATCCCTGACGTGGATAAAGATTATAATGTTACTGTACCTAGTACTGCTGCTACTCCAATTACTGATGTCGATAAAAATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E738693" ref_strand="+" ref_description="SGN-E738693 [LC14CE11]">
      <seq>cttgtcaactgggtcgtcttctatttccactaggtcactctggttcttgaaatcttgggttcctgttatccctgtgaacttcatctttctgtaatggaaaattccattgttcttcatactggaaatcaattccaccccagcttaccctttttctcatttaggcccaaaaagttatctcgaattcatggctccagtagagagcaaatgtggaggatcaagcgcgttaaagcaacaggtgaaaattctggggaagctgcaagtgctgatgaatcggatgatgccttacaggttacaattgaaaagagcaaaaaggttttagccatgcaacaggacctacttcaacagattgcagaaagaagaaaagtagtctcttcaataaaaagcagtcttgccgatgctactggtacttatgatggtgggagtggtagcttatcagatgttgatatccctgacgtggataaagattataatgttactgtacctagtactgctgctactccaattactgatgtcgataaaaatacaccgcctgctataagccaagattttgttgaaagtaaaagagaagtcaaaagggacctggccgatgaaagggcacccccactttcaagatcatccatcacagccagtagccagacttcctctactgtaagttccaaaagaatattgaatgtccctccagaaactccgaagttcagtcaagagacacttttgaatgtgaattcgcgtaaaagtttagtcgatgttcctggaaagaagatccagtcttatatgccttcattatgtaaagaatcctcagcacaatcccttgtggaaaagaggaatgaaaatcttgaaggatcaagtgctgaggcaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="+" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="15616" stop="17590"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15916" g_stop="16260" g_length="345"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="345" r_length="345" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16261" i_stop="16779" i_length="519">
            <donor d_prob="0.863" d_score="1.00"/>
            <acceptor a_prob="0.912" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16780" g_stop="17290" g_length="511"/>
          <reference_exon_boundary r_type="cDNA" r_start="346" r_stop="856" r_length="511" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="+" ref_id="SGN-E738693" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>856</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E738693" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15916" e_stop="16260"/>
          <exon e_start="16780" e_stop="17290"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTGTCAACTGGGTCGTCTTCTATTTCCACTAGGTCACTCTGGTTCTTGAAATCTTGGGTTCCTGTTATCCCTGTGAACTTCATCTTTCTGTAATGGAAAATTCCATTGTTCTTCATACTGGAAATCAATTCCACCCCAGCTTACCCTTTTTCTCATTTAGGCCCAAAAAGTTATCTCGAATTCATGGCTCCAGTAGAGAGCAAATGTGGAGGATCAAGCGCGTTAAAGCAACAGGTGAAAATTCTGGGGAAGCTGCAAGTGCTGATGAATCGGATGATGCCTTACAGGTTACAATTGAAAAGAGCAAAAAGGTTTTAGCCATGCAACAGGACCTACTTCAACAGGTAACCCTTTTGGTACTCAATCATAAAGTGAAAAGAAAGATTTCTTTTTCCAGGTCAGAAAGATAAAGAAGTAAAAGATGTACTTGTTTTAGGGCCTTTTGACTGTTTTTCCTTAAATGCGGATACAAGGGATATAATTATCATTATATATGCTAATAATGAATAGAAATCCTGATTTAAGATATTAGACATGTTCTAATTTCTGTAAACGAAACAATCGATTTTTTCAAGAATGTCAAATTTGAAAATGAATCTATGTTTAAATAACTTAGAAATCAGTATGATAGGACTGTTTTCTGAGAATTTGTTTCAGTATGTTGTGGATAAAGATTGTAACCATGTTCTGATTTAGAAGAGGAGAAGTTCGCCTGTAGGATGATTTGTTGCTGTAGTTCATATGTTTTTTTGTTGGTTTAATTGTCTTCCTGAGCATTGCATATGTTTCAGTTTGCAATTTATCATAGTGGGTTTAGAAACACTATTTACATTGTCTTCATCCTTGAATTCTTTGCATATTAGATTGCAGAAAGAAGAAAAGTAGTCTCTTCAATAAAAAGCAGTCTTGCCGATGCTACTGGTACTTATGATGGTGGGAGTGGTAGCTTATCAGATGTTGATATCCCTGACGTGGATAAAGATTATAATGTTACTGTACCTAGTACTGCTGCTACTCCAATTACTGATGTCGATAAAAATACACCGCCTGCTATAAGCCAAGATTTTGTTGAAAGTAAAAGAGAAGTCAAAAGGGACCTGGCCGATGAAAGGGCACCCCCACTTTCAAGATCATCCATCACAGCCAGTAGCCAGACTTCCTCTACTGTAAGTTCCAAAAGAATATTGAATGTCCCTCCAGAAACTCCGAAGTTCAGTCAAGAGACACTTTTGAATGTGAATTCGCGTAAAAGTTTAGTCGATGTTCCTGGAAAGAAGATCCAGTCTTATATGCCTTCATTATGTAAAGAATCCTCAGCACAATCCCTTGTGGAAAAGAGGAATGAAAATCTTGAAGGATCAAGTGCTGAGGCAA</genome_strand>
        <mrna_strand>CTTGTCAACTGGGTCGTCTTCTATTTCCACTAGGTCACTCTGGTTCTTGAAATCTTGGGTTCCTGTTATCCCTGTGAACTTCATCTTTCTGTAATGGAAAATTCCATTGTTCTTCATACTGGAAATCAATTCCACCCCAGCTTACCCTTTTTCTCATTTAGGCCCAAAAAGTTATCTCGAATTCATGGCTCCAGTAGAGAGCAAATGTGGAGGATCAAGCGCGTTAAAGCAACAGGTGAAAATTCTGGGGAAGCTGCAAGTGCTGATGAATCGGATGATGCCTTACAGGTTACAATTGAAAAGAGCAAAAAGGTTTTAGCCATGCAACAGGACCTACTTCAACAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCAGAAAGAAGAAAAGTAGTCTCTTCAATAAAAAGCAGTCTTGCCGATGCTACTGGTACTTATGATGGTGGGAGTGGTAGCTTATCAGATGTTGATATCCCTGACGTGGATAAAGATTATAATGTTACTGTACCTAGTACTGCTGCTACTCCAATTACTGATGTCGATAAAAATACACCGCCTGCTATAAGCCAAGATTTTGTTGAAAGTAAAAGAGAAGTCAAAAGGGACCTGGCCGATGAAAGGGCACCCCCACTTTCAAGATCATCCATCACAGCCAGTAGCCAGACTTCCTCTACTGTAAGTTCCAAAAGAATATTGAATGTCCCTCCAGAAACTCCGAAGTTCAGTCAAGAGACACTTTTGAATGTGAATTCGCGTAAAAGTTTAGTCGATGTTCCTGGAAAGAAGATCCAGTCTTATATGCCTTCATTATGTAAAGAATCCTCAGCACAATCCCTTGTGGAAAAGAGGAATGAAAATCTTGAAGGATCAAGTGCTGAGGCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E441729" ref_strand="+" ref_description="SGN-E441729 [cSTA-31-A6]">
      <seq>gttttctttacttgtcaattatctctactgggtcggcttctatttccactaggtcactctggttcttgaaatcttggattcctattatccctgtgaacttcatcttttgtgatttctactgtaatggagaattccattcttcttcatagtggaaatcagttccaccccaacttaccccttttagcacttaggcccaaaaaattatctctaattcatggctccagtagagagcaaatgtggaggatcaagcgcgttaaagcaacaggtgaaaattctggggaagctgcaagtgctgatgaatcgaatgatgccttacaggttacaattgaaaagagcaaaaaggttttagccatgcaacaggacctacttcaacagattgcagaaagaagaaaagtagtctcttcaataaaaagcagtcttgccaatgccaaaggtacttatgatggtgggagtggtagcttatcagatgttgatatccctgacgtggataaagattataatgttactgtacctagtactgctgctactccaattactgatgtcgataaaaatacaccgcctgctataagccaagattttgttgaaagtaaaagagaaatcaaaagggacctggccgatgaaagggcacccccactgtcgagatcatctatcacagccagtagccagatttcctctactgtaagttccaaaagaacgttgaatgtc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="+" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="15607" stop="17409"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15925" g_stop="16260" g_length="336"/>
          <reference_exon_boundary r_type="cDNA" r_start="29" r_stop="375" r_length="347" r_score="0.890"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16261" i_stop="16779" i_length="519">
            <donor d_prob="0.863" d_score="1.00"/>
            <acceptor a_prob="0.912" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16780" g_stop="17109" g_length="330"/>
          <reference_exon_boundary r_type="cDNA" r_start="376" r_stop="705" r_length="330" r_score="0.967"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="+" ref_id="SGN-E441729" ref_strand="+">
        <total_alignment_score>0.928</total_alignment_score>
        <cumulative_length_of_scored_exons>666</cumulative_length_of_scored_exons>
        <coverage percentage="0.945" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E441729" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15925" e_stop="16260"/>
          <exon e_start="16780" e_stop="17109"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGGTCGTCTTCTATTTCCACTAGGTCACTCTGGTTCTTGAAATCTTGGGTTCCTGTTATCCCTGTGAACTTCATC-TTT-------C---TGTAATGGAAAATTCCATTGTTCTTCATACTGGAAATCAATTCCACCCCAGCTTACCCTTTTTCTCATTTAGGCCCAAAAAGTTATCTCGAATTCATGGCTCCAGTAGAGAGCAAATGTGGAGGATCAAGCGCGTTAAAGCAACAGGTGAAAATTCTGGGGAAGCTGCAAGTGCTGATGAATCGGATGATGCCTTACAGGTTACAATTGAAAAGAGCAAAAAGGTTTTAGCCATGCAACAGGACCTACTTCAACAGGTAACCCTTTTGGTACTCAATCATAAAGTGAAAAGAAAGATTTCTTTTTCCAGGTCAGAAAGATAAAGAAGTAAAAGATGTACTTGTTTTAGGGCCTTTTGACTGTTTTTCCTTAAATGCGGATACAAGGGATATAATTATCATTATATATGCTAATAATGAATAGAAATCCTGATTTAAGATATTAGACATGTTCTAATTTCTGTAAACGAAACAATCGATTTTTTCAAGAATGTCAAATTTGAAAATGAATCTATGTTTAAATAACTTAGAAATCAGTATGATAGGACTGTTTTCTGAGAATTTGTTTCAGTATGTTGTGGATAAAGATTGTAACCATGTTCTGATTTAGAAGAGGAGAAGTTCGCCTGTAGGATGATTTGTTGCTGTAGTTCATATGTTTTTTTGTTGGTTTAATTGTCTTCCTGAGCATTGCATATGTTTCAGTTTGCAATTTATCATAGTGGGTTTAGAAACACTATTTACATTGTCTTCATCCTTGAATTCTTTGCATATTAGATTGCAGAAAGAAGAAAAGTAGTCTCTTCAATAAAAAGCAGTCTTGCCGATGCTACTGGTACTTATGATGGTGGGAGTGGTAGCTTATCAGATGTTGATATCCCTGACGTGGATAAAGATTATAATGTTACTGTACCTAGTACTGCTGCTACTCCAATTACTGATGTCGATAAAAATACACCGCCTGCTATAAGCCAAGATTTTGTTGAAAGTAAAAGAGAAGTCAAAAGGGACCTGGCCGATGAAAGGGCACCCCCACTTTCAAGATCATCCATCACAGCCAGTAGCCAGACTTCCTCTACTGTAAGTTCCAAAAGAATATTGAATGTC</genome_strand>
        <mrna_strand>TGGGTCGGCTTCTATTTCCACTAGGTCACTCTGGTTCTTGAAATCTTGGATTCCTATTATCCCTGTGAACTTCATCTTTTGTGATTTCTACTGTAATGGAGAATTCCATTCTTCTTCATAGTGGAAATCAGTTCCACCCCAACTTACCCCTTTTAGCACTTAGGCCCAAAAAATTATCTCTAATTCATGGCTCCAGTAGAGAGCAAATGTGGAGGATCAAGCGCGTTAAAGCAACAGGTGAAAATTCTGGGGAAGCTGCAAGTGCTGATGAATCGAATGATGCCTTACAGGTTACAATTGAAAAGAGCAAAAAGGTTTTAGCCATGCAACAGGACCTACTTCAACAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCAGAAAGAAGAAAAGTAGTCTCTTCAATAAAAAGCAGTCTTGCCAATGCCAAAGGTACTTATGATGGTGGGAGTGGTAGCTTATCAGATGTTGATATCCCTGACGTGGATAAAGATTATAATGTTACTGTACCTAGTACTGCTGCTACTCCAATTACTGATGTCGATAAAAATACACCGCCTGCTATAAGCCAAGATTTTGTTGAAAGTAAAAGAGAAATCAAAAGGGACCTGGCCGATGAAAGGGCACCCCCACTGTCGAGATCATCTATCACAGCCAGTAGCCAGATTTCCTCTACTGTAAGTTCCAAAAGAACGTTGAATGTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E482775" ref_strand="+" ref_description="SGN-E482775 [cSTE-5-E22]">
      <seq>gttttctttacttgtcaattatctctactgggtcggcttctatttccactaggtcactctggttcttgaaatcttggattcctattatccctgtgaacttcatcttttgtgatttctactgtaatggagaattccattcttcttcatagtggaaatcagttccaccccaacttaccccttttagcacttaggcccaaaaaattatctctaattcatggctccagtagagagcaaatgtggaggatcaagcgcgttaaagcaacaggtgaaaattctggggaagctgcaagtgctgatgaatcgaatgatgccttacaggttacaattgaaaagagcaaaaaggttttagccatgcaacaggacctacttcaacagattgcagaaagaagaaaagtagtctcttcaataaaaagcagtcttgccaatgccaaaggtacttatgatggtgggagtggtagcttatcagatgttgatatccctgacgtggataaagattataatgttactgtacctagtactgctgctactccaattactgatgtcgataaaaatacaccgcctgctataagccaagattttgttgaaagtaaaagagaaatcaaaagggacctggccgatgaaagggcacccccactgtcgagatcatctatcacagccagtagccagatttcctctactgtaagttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="+" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="15607" stop="17390"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15925" g_stop="16260" g_length="336"/>
          <reference_exon_boundary r_type="cDNA" r_start="29" r_stop="375" r_length="347" r_score="0.890"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16261" i_stop="16779" i_length="519">
            <donor d_prob="0.863" d_score="1.00"/>
            <acceptor a_prob="0.912" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16780" g_stop="17090" g_length="311"/>
          <reference_exon_boundary r_type="cDNA" r_start="376" r_stop="686" r_length="311" r_score="0.971"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="+" ref_id="SGN-E482775" ref_strand="+">
        <total_alignment_score>0.929</total_alignment_score>
        <cumulative_length_of_scored_exons>647</cumulative_length_of_scored_exons>
        <coverage percentage="0.943" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E482775" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15925" e_stop="16260"/>
          <exon e_start="16780" e_stop="17090"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGGTCGTCTTCTATTTCCACTAGGTCACTCTGGTTCTTGAAATCTTGGGTTCCTGTTATCCCTGTGAACTTCATC-TTT-------C---TGTAATGGAAAATTCCATTGTTCTTCATACTGGAAATCAATTCCACCCCAGCTTACCCTTTTTCTCATTTAGGCCCAAAAAGTTATCTCGAATTCATGGCTCCAGTAGAGAGCAAATGTGGAGGATCAAGCGCGTTAAAGCAACAGGTGAAAATTCTGGGGAAGCTGCAAGTGCTGATGAATCGGATGATGCCTTACAGGTTACAATTGAAAAGAGCAAAAAGGTTTTAGCCATGCAACAGGACCTACTTCAACAGGTAACCCTTTTGGTACTCAATCATAAAGTGAAAAGAAAGATTTCTTTTTCCAGGTCAGAAAGATAAAGAAGTAAAAGATGTACTTGTTTTAGGGCCTTTTGACTGTTTTTCCTTAAATGCGGATACAAGGGATATAATTATCATTATATATGCTAATAATGAATAGAAATCCTGATTTAAGATATTAGACATGTTCTAATTTCTGTAAACGAAACAATCGATTTTTTCAAGAATGTCAAATTTGAAAATGAATCTATGTTTAAATAACTTAGAAATCAGTATGATAGGACTGTTTTCTGAGAATTTGTTTCAGTATGTTGTGGATAAAGATTGTAACCATGTTCTGATTTAGAAGAGGAGAAGTTCGCCTGTAGGATGATTTGTTGCTGTAGTTCATATGTTTTTTTGTTGGTTTAATTGTCTTCCTGAGCATTGCATATGTTTCAGTTTGCAATTTATCATAGTGGGTTTAGAAACACTATTTACATTGTCTTCATCCTTGAATTCTTTGCATATTAGATTGCAGAAAGAAGAAAAGTAGTCTCTTCAATAAAAAGCAGTCTTGCCGATGCTACTGGTACTTATGATGGTGGGAGTGGTAGCTTATCAGATGTTGATATCCCTGACGTGGATAAAGATTATAATGTTACTGTACCTAGTACTGCTGCTACTCCAATTACTGATGTCGATAAAAATACACCGCCTGCTATAAGCCAAGATTTTGTTGAAAGTAAAAGAGAAGTCAAAAGGGACCTGGCCGATGAAAGGGCACCCCCACTTTCAAGATCATCCATCACAGCCAGTAGCCAGACTTCCTCTACTGTAAGTTC</genome_strand>
        <mrna_strand>TGGGTCGGCTTCTATTTCCACTAGGTCACTCTGGTTCTTGAAATCTTGGATTCCTATTATCCCTGTGAACTTCATCTTTTGTGATTTCTACTGTAATGGAGAATTCCATTCTTCTTCATAGTGGAAATCAGTTCCACCCCAACTTACCCCTTTTAGCACTTAGGCCCAAAAAATTATCTCTAATTCATGGCTCCAGTAGAGAGCAAATGTGGAGGATCAAGCGCGTTAAAGCAACAGGTGAAAATTCTGGGGAAGCTGCAAGTGCTGATGAATCGAATGATGCCTTACAGGTTACAATTGAAAAGAGCAAAAAGGTTTTAGCCATGCAACAGGACCTACTTCAACAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCAGAAAGAAGAAAAGTAGTCTCTTCAATAAAAAGCAGTCTTGCCAATGCCAAAGGTACTTATGATGGTGGGAGTGGTAGCTTATCAGATGTTGATATCCCTGACGTGGATAAAGATTATAATGTTACTGTACCTAGTACTGCTGCTACTCCAATTACTGATGTCGATAAAAATACACCGCCTGCTATAAGCCAAGATTTTGTTGAAAGTAAAAGAGAAATCAAAAGGGACCTGGCCGATGAAAGGGCACCCCCACTGTCGAGATCATCTATCACAGCCAGTAGCCAGATTTCCTCTACTGTAAGTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E484850" ref_strand="+" ref_description="SGN-E484850 [cSTE-15-F13]">
      <seq>ttctttacttgtcaattatctctactgggtcggcttctatttccactaggtcactctggttcttgaaatcttggattcctattatccctgtgaacttcatcttttgtgatttctactgtaatggagaattccattcttcttcatagtggaaatcagttccaccccaacttaccccttttagcacttaggcccaaaaaattatctctaattcatggctccagtagagagcaaatgtggaggatcaagcgcgttaaagcaacaggtgaaaattctggggaagctgcaagtgctgatgaatcgaatgatgccttacaggttacaattgaaaagagcaaaaaggttttagccatgcaacaggacctacttcaacagattgcagaaagaagaaaagtagtctcttcaataaaaagcagtcttgccaatgccaaaggtacttatgatggtgggagtggtagcttatcagatgttgatatccctgacgtggataaagattataatgttactgtacctagtactgctgctactccaattactgatgtcgataaaaatacaccgcctgctataagccaagattttgttgaaagtaaaagagaaatcaaaagggacctggccgatgaaagggcacccccactgtc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="+" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="15607" stop="17342"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15925" g_stop="16260" g_length="336"/>
          <reference_exon_boundary r_type="cDNA" r_start="26" r_stop="372" r_length="347" r_score="0.890"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16261" i_stop="16779" i_length="519">
            <donor d_prob="0.863" d_score="1.00"/>
            <acceptor a_prob="0.912" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16780" g_stop="17042" g_length="263"/>
          <reference_exon_boundary r_type="cDNA" r_start="373" r_stop="635" r_length="263" r_score="0.977"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="+" ref_id="SGN-E484850" ref_strand="+">
        <total_alignment_score>0.928</total_alignment_score>
        <cumulative_length_of_scored_exons>599</cumulative_length_of_scored_exons>
        <coverage percentage="0.943" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E484850" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15925" e_stop="16260"/>
          <exon e_start="16780" e_stop="17042"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGGTCGTCTTCTATTTCCACTAGGTCACTCTGGTTCTTGAAATCTTGGGTTCCTGTTATCCCTGTGAACTTCATC-TTT----------CTGTAATGGAAAATTCCATTGTTCTTCATACTGGAAATCAATTCCACCCCAGCTTACCCTTTTTCTCATTTAGGCCCAAAAAGTTATCTCGAATTCATGGCTCCAGTAGAGAGCAAATGTGGAGGATCAAGCGCGTTAAAGCAACAGGTGAAAATTCTGGGGAAGCTGCAAGTGCTGATGAATCGGATGATGCCTTACAGGTTACAATTGAAAAGAGCAAAAAGGTTTTAGCCATGCAACAGGACCTACTTCAACAGGTAACCCTTTTGGTACTCAATCATAAAGTGAAAAGAAAGATTTCTTTTTCCAGGTCAGAAAGATAAAGAAGTAAAAGATGTACTTGTTTTAGGGCCTTTTGACTGTTTTTCCTTAAATGCGGATACAAGGGATATAATTATCATTATATATGCTAATAATGAATAGAAATCCTGATTTAAGATATTAGACATGTTCTAATTTCTGTAAACGAAACAATCGATTTTTTCAAGAATGTCAAATTTGAAAATGAATCTATGTTTAAATAACTTAGAAATCAGTATGATAGGACTGTTTTCTGAGAATTTGTTTCAGTATGTTGTGGATAAAGATTGTAACCATGTTCTGATTTAGAAGAGGAGAAGTTCGCCTGTAGGATGATTTGTTGCTGTAGTTCATATGTTTTTTTGTTGGTTTAATTGTCTTCCTGAGCATTGCATATGTTTCAGTTTGCAATTTATCATAGTGGGTTTAGAAACACTATTTACATTGTCTTCATCCTTGAATTCTTTGCATATTAGATTGCAGAAAGAAGAAAAGTAGTCTCTTCAATAAAAAGCAGTCTTGCCGATGCTACTGGTACTTATGATGGTGGGAGTGGTAGCTTATCAGATGTTGATATCCCTGACGTGGATAAAGATTATAATGTTACTGTACCTAGTACTGCTGCTACTCCAATTACTGATGTCGATAAAAATACACCGCCTGCTATAAGCCAAGATTTTGTTGAAAGTAAAAGAGAAGTCAAAAGGGACCTGGCCGATGAAAGGGCACCCCCACTTTC</genome_strand>
        <mrna_strand>TGGGTCGGCTTCTATTTCCACTAGGTCACTCTGGTTCTTGAAATCTTGGATTCCTATTATCCCTGTGAACTTCATCTTTTGTGATTTCTACTGTAATGGAGAATTCCATTCTTCTTCATAGTGGAAATCAGTTCCACCCCAACTTACCCCTTTTAGCACTTAGGCCCAAAAAATTATCTCTAATTCATGGCTCCAGTAGAGAGCAAATGTGGAGGATCAAGCGCGTTAAAGCAACAGGTGAAAATTCTGGGGAAGCTGCAAGTGCTGATGAATCGAATGATGCCTTACAGGTTACAATTGAAAAGAGCAAAAAGGTTTTAGCCATGCAACAGGACCTACTTCAACAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCAGAAAGAAGAAAAGTAGTCTCTTCAATAAAAAGCAGTCTTGCCAATGCCAAAGGTACTTATGATGGTGGGAGTGGTAGCTTATCAGATGTTGATATCCCTGACGTGGATAAAGATTATAATGTTACTGTACCTAGTACTGCTGCTACTCCAATTACTGATGTCGATAAAAATACACCGCCTGCTATAAGCCAAGATTTTGTTGAAAGTAAAAGAGAAATCAAAAGGGACCTGGCCGATGAAAGGGCACCCCCACTGTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E419351" ref_strand="+" ref_description="SGN-E419351 [STM-29-O6]">
      <seq>ctcaattgggttttctttacttgtcaattatctctattgggtcggcttctatttccactaggtcactctgtttcttgaaatcttggattcctattatccctgtgaacttcatcttttgtgatttctactgtaatggagaattccattcttcttcatagtggaaatcagttccaccccaacttatcccttttcgcacttaggcccaaaaaaattatctctaattcatggctccagtagagagcaaatgtggaggatcaagcgcgttaaagcaacaggtgaaaattctggggaagctgcaagtgctgatgaatcgaatgatgccttacaggttacaattgaaaagagcaaaaaggttttagccatgcaacaggacctacttcaacagattgcagaaagaagaaaagtagtctcttcaataaaaagcagtcttgccaatgctaaaggtacttatgatggtgggagtggtagcttatcagatgttgatatccctgacgtggataaagattataatgttactgtacctagtactgctgctactccaattactgatgtcgataaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="+" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="15607" stop="17254"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15925" g_stop="16260" g_length="336"/>
          <reference_exon_boundary r_type="cDNA" r_start="38" r_stop="385" r_length="348" r_score="0.881"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16261" i_stop="16779" i_length="519">
            <donor d_prob="0.863" d_score="1.00"/>
            <acceptor a_prob="0.912" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16780" g_stop="16954" g_length="175"/>
          <reference_exon_boundary r_type="cDNA" r_start="386" r_stop="560" r_length="175" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="+" ref_id="SGN-E419351" ref_strand="+">
        <total_alignment_score>0.916</total_alignment_score>
        <cumulative_length_of_scored_exons>511</cumulative_length_of_scored_exons>
        <coverage percentage="0.913" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E419351" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15925" e_stop="16260"/>
          <exon e_start="16780" e_stop="16954"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGGTCGTCTTCTATTTCCACTAGGTCACTCTGGTTCTTGAAATCTTGGGTTCCTGTTATCCCTGTGAACTTCATC--TT--------T-CTGTAATGGAAAATTCCATTGTTCTTCATACTGGAAATCAATTCCACCCCAGCTTACCCTTTTTCTCATTTAGGCCC-AAAAAGTTATCTCGAATTCATGGCTCCAGTAGAGAGCAAATGTGGAGGATCAAGCGCGTTAAAGCAACAGGTGAAAATTCTGGGGAAGCTGCAAGTGCTGATGAATCGGATGATGCCTTACAGGTTACAATTGAAAAGAGCAAAAAGGTTTTAGCCATGCAACAGGACCTACTTCAACAGGTAACCCTTTTGGTACTCAATCATAAAGTGAAAAGAAAGATTTCTTTTTCCAGGTCAGAAAGATAAAGAAGTAAAAGATGTACTTGTTTTAGGGCCTTTTGACTGTTTTTCCTTAAATGCGGATACAAGGGATATAATTATCATTATATATGCTAATAATGAATAGAAATCCTGATTTAAGATATTAGACATGTTCTAATTTCTGTAAACGAAACAATCGATTTTTTCAAGAATGTCAAATTTGAAAATGAATCTATGTTTAAATAACTTAGAAATCAGTATGATAGGACTGTTTTCTGAGAATTTGTTTCAGTATGTTGTGGATAAAGATTGTAACCATGTTCTGATTTAGAAGAGGAGAAGTTCGCCTGTAGGATGATTTGTTGCTGTAGTTCATATGTTTTTTTGTTGGTTTAATTGTCTTCCTGAGCATTGCATATGTTTCAGTTTGCAATTTATCATAGTGGGTTTAGAAACACTATTTACATTGTCTTCATCCTTGAATTCTTTGCATATTAGATTGCAGAAAGAAGAAAAGTAGTCTCTTCAATAAAAAGCAGTCTTGCCGATGCTACTGGTACTTATGATGGTGGGAGTGGTAGCTTATCAGATGTTGATATCCCTGACGTGGATAAAGATTATAATGTTACTGTACCTAGTACTGCTGCTACTCCAATTACTGATGTCGATAAAA</genome_strand>
        <mrna_strand>TGGGTCGGCTTCTATTTCCACTAGGTCACTCTGTTTCTTGAAATCTTGGATTCCTATTATCCCTGTGAACTTCATCTTTTGTGATTTCTACTGTAATGGAGAATTCCATTCTTCTTCATAGTGGAAATCAGTTCCACCCCAACTTATCCCTTTTCGCACTTAGGCCCAAAAAAATTATCTCTAATTCATGGCTCCAGTAGAGAGCAAATGTGGAGGATCAAGCGCGTTAAAGCAACAGGTGAAAATTCTGGGGAAGCTGCAAGTGCTGATGAATCGAATGATGCCTTACAGGTTACAATTGAAAAGAGCAAAAAGGTTTTAGCCATGCAACAGGACCTACTTCAACAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCAGAAAGAAGAAAAGTAGTCTCTTCAATAAAAAGCAGTCTTGCCAATGCTAAAGGTACTTATGATGGTGGGAGTGGTAGCTTATCAGATGTTGATATCCCTGACGTGGATAAAGATTATAATGTTACTGTACCTAGTACTGCTGCTACTCCAATTACTGATGTCGATAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E441730" ref_strand="+" ref_description="SGN-E441730 [cSTA-31-A6]">
      <seq>gttttctttacttgtcaattatctctactgggtcggcttctatttccactaggtcactctggttcttgaaatcttggattcctattatccctgtgaacttcatcttttgtgatttctactgtaatggagaattccattcttcttcatagtggaaatcagttccaccccaacttaccccttttagcacttaggcccaaaaaattatctctaattcatggctccagtagagagcaaatgtggaggatcaagcgcgttaaagcaacaggtgaaaattctggggaagctgcaagtgctgatgaatcgaatgatgccttacaggttacaattgaaaagagcaaaaaggttttagccatgcaacaggacctacttcaacagattgcagaaagaagaaaagtagtctcttcaataaaaagcagtcttgccaatgccaaaggtacttatgatggtgggagtggtagcttatcagatgttgatatccctgacgtggataaagattataatgttactgtacctagtactgctgctactccaattactgatgtcgataaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="+" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="15607" stop="17254"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15925" g_stop="16260" g_length="336"/>
          <reference_exon_boundary r_type="cDNA" r_start="29" r_stop="375" r_length="347" r_score="0.890"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16261" i_stop="16779" i_length="519">
            <donor d_prob="0.863" d_score="1.00"/>
            <acceptor a_prob="0.912" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16780" g_stop="16954" g_length="175"/>
          <reference_exon_boundary r_type="cDNA" r_start="376" r_stop="550" r_length="175" r_score="0.977"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="+" ref_id="SGN-E441730" ref_strand="+">
        <total_alignment_score>0.920</total_alignment_score>
        <cumulative_length_of_scored_exons>511</cumulative_length_of_scored_exons>
        <coverage percentage="0.929" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E441730" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15925" e_stop="16260"/>
          <exon e_start="16780" e_stop="16954"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGGTCGTCTTCTATTTCCACTAGGTCACTCTGGTTCTTGAAATCTTGGGTTCCTGTTATCCCTGTGAACTTCATC-TTT-------C---TGTAATGGAAAATTCCATTGTTCTTCATACTGGAAATCAATTCCACCCCAGCTTACCCTTTTTCTCATTTAGGCCCAAAAAGTTATCTCGAATTCATGGCTCCAGTAGAGAGCAAATGTGGAGGATCAAGCGCGTTAAAGCAACAGGTGAAAATTCTGGGGAAGCTGCAAGTGCTGATGAATCGGATGATGCCTTACAGGTTACAATTGAAAAGAGCAAAAAGGTTTTAGCCATGCAACAGGACCTACTTCAACAGGTAACCCTTTTGGTACTCAATCATAAAGTGAAAAGAAAGATTTCTTTTTCCAGGTCAGAAAGATAAAGAAGTAAAAGATGTACTTGTTTTAGGGCCTTTTGACTGTTTTTCCTTAAATGCGGATACAAGGGATATAATTATCATTATATATGCTAATAATGAATAGAAATCCTGATTTAAGATATTAGACATGTTCTAATTTCTGTAAACGAAACAATCGATTTTTTCAAGAATGTCAAATTTGAAAATGAATCTATGTTTAAATAACTTAGAAATCAGTATGATAGGACTGTTTTCTGAGAATTTGTTTCAGTATGTTGTGGATAAAGATTGTAACCATGTTCTGATTTAGAAGAGGAGAAGTTCGCCTGTAGGATGATTTGTTGCTGTAGTTCATATGTTTTTTTGTTGGTTTAATTGTCTTCCTGAGCATTGCATATGTTTCAGTTTGCAATTTATCATAGTGGGTTTAGAAACACTATTTACATTGTCTTCATCCTTGAATTCTTTGCATATTAGATTGCAGAAAGAAGAAAAGTAGTCTCTTCAATAAAAAGCAGTCTTGCCGATGCTACTGGTACTTATGATGGTGGGAGTGGTAGCTTATCAGATGTTGATATCCCTGACGTGGATAAAGATTATAATGTTACTGTACCTAGTACTGCTGCTACTCCAATTACTGATGTCGATAAAA</genome_strand>
        <mrna_strand>TGGGTCGGCTTCTATTTCCACTAGGTCACTCTGGTTCTTGAAATCTTGGATTCCTATTATCCCTGTGAACTTCATCTTTTGTGATTTCTACTGTAATGGAGAATTCCATTCTTCTTCATAGTGGAAATCAGTTCCACCCCAACTTACCCCTTTTAGCACTTAGGCCCAAAAAATTATCTCTAATTCATGGCTCCAGTAGAGAGCAAATGTGGAGGATCAAGCGCGTTAAAGCAACAGGTGAAAATTCTGGGGAAGCTGCAAGTGCTGATGAATCGAATGATGCCTTACAGGTTACAATTGAAAAGAGCAAAAAGGTTTTAGCCATGCAACAGGACCTACTTCAACAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCAGAAAGAAGAAAAGTAGTCTCTTCAATAAAAAGCAGTCTTGCCAATGCCAAAGGTACTTATGATGGTGGGAGTGGTAGCTTATCAGATGTTGATATCCCTGACGTGGATAAAGATTATAATGTTACTGTACCTAGTACTGCTGCTACTCCAATTACTGATGTCGATAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E624233" ref_strand="+" ref_description="SGN-E624233 [GI|48927499]">
      <seq>ggttcttgaaatcttggattcctattatccctgtgaacttcatcttttgtgatttctactgtaatggagaattccattcttcttcatagtggaaatcagttccaccccaacttaccccttttagcacttaggcccaaaaaattatctctaattcatggctccagtagagagcaaatgtggaggatcaagcgcgttaaagcaacaggtgaaaattctggggaagctgcaagtgctgatgaatcgaatgatgccttacaggttacaattgaaaagagcaaaaaggttttagccatgcaacaggacctacttcaacagattgcagaaagaagaaaagtagtctcttcaataaaaagcagtcttgccaatgccaaaggtacttatgatggtgggagtggtagcttatcagatgttgatatccctgacgtggataaagattataatgttactgtacctagtactgctgctactccaattactgatgtcgataaaaatacaccgcctgctataagccaagattttgttgaaagtaaaagagaaatcaaaagggacctggccgatgaaagggcacccccactgtcgagatcatctatcacagccagtagccagatttcctctactgtaagttccaaaagaacgttgaatgtccctccagaaactccgaagtccagtcaagagacacttttggatgtgaattcacgcaaaagtttagtagatgttcctggaaagaagatccagtcttatatgccttcattacgtaaagaatcctcagcatcccatgtggaacagaggaatgaaaatcttgaaggatcaagtgctgaggcaaacgaagagactgaagatcctgtgaatatagatgagaaaccccctccattggcaggaacaaatgttatgaacattattttggtggcttcagaatgcgctccatggtctaaaacaggtgggcttggagatgttgctggagcattacccaaagctttggctcgacgtggccacagagttatggttgtggcacctcgttatgacaactatcctgaacctcaagattctggtgtaagaaaaatttataaagttgatggtcaggatgtggaagtgacttacttccaagcttttattgatggtgtggattttgttttcattgacagtcatatgtttagacacattgggaacaacatttacggagggaaccgtgtggatattttaaaacgcatggttttattttgcaaagcagcgattgaggttccttggcatgttccatgtggtggggtctgctatggagatggaaatttagtgttcattgctaatgattggcatactgctttattgccagtatatctgaaagcttattatcgtgacaatggaattatgaactatacaagatctgtcctggtgattcataacatcgctcatcagggtcgtggtcctttggaggatttttcatatgtagatcttccaccacactatatggaccctttcaagttgtatgacccagtaggaggtgagcatttcaacatttttgcggctggtctaaagacagcagatcgtgtagttacagttagtcatggatattcatgggaactaaagacttcccaaggtggttggggattgcatcagataattaatgagaacgattggaaattacagggtattgtgaatgggattgatacaaaagagtggaaccctgagttggacgttcacttacagtcagatggttacatgaactactccttggacacgctacagactggcaagcctcaatgtaaagctgcattgcagaaggaacttggtttaccagttcgtgatgatgtcccactgatcggtttcattgggaggcttgacccacaaaagggtgttgatctgattgctgaggcagtgccttggatgatgggtcaggatgtacaactggtcatgttggggacggggaggcgtgaccttgaacagatgctaaggcaatttgagtgtcaacacaatgataaaattagaggatgggttggtttctctgtgaagacttctcatcgtataactgctggtgcagacattctgctcatgccttctagatttgagccttgcggactgaaccagctttatgcaatgaaatatgggactattcctgttgttcatgcagtaggaggactcagagatactgtgcagccctttgatccttttaatgagtcaggactggggtggaccttcagtagggctgaagctagccagctgatccacgcattaggaaattgcttactgacttatcgtgagtacaaaaagagttgggaggggattcagacacgttgtatgacacaagacttaagttgggataatgctgctcagaactatgaagaagttctcatcgctgctaagtatcagtggtgaggttcattacttgtagatatttggggattttggccattgtatcaagttctaatgatgggatttcagagacatgtttctggtatcgacacgagaggatgcatgcaacaagttggctaactatcatactactaccacgtcaggaatgattgccgcacttgatcatgtaatcatgtatatactctattttgtttgcaaaatgtagttacatgttgcaatttctactctatatttgttgaaagttttagtgtcaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="+" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="15657" stop="66088"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16004" g_stop="16260" g_length="257"/>
          <reference_exon_boundary r_type="cDNA" r_start="59" r_stop="315" r_length="257" r_score="0.953"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16261" i_stop="16779" i_length="519">
            <donor d_prob="0.863" d_score="1.00"/>
            <acceptor a_prob="0.912" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16780" g_stop="17404" g_length="625"/>
          <reference_exon_boundary r_type="cDNA" r_start="316" r_stop="937" r_length="622" r_score="0.960"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="17405" i_stop="18075" i_length="671">
            <donor d_prob="0.908" d_score="1.00"/>
            <acceptor a_prob="0.634" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="18076" g_stop="18140" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="938" r_stop="1002" r_length="65" r_score="0.985"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="18141" i_stop="18541" i_length="401">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.761" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="18542" g_stop="18619" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="1003" r_stop="1080" r_length="78" r_score="0.987"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="18620" i_stop="18722" i_length="103">
            <donor d_prob="0.989" d_score="0.98"/>
            <acceptor a_prob="0.855" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="18723" g_stop="18833" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="1081" r_stop="1191" r_length="111" r_score="0.982"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="18834" i_stop="19276" i_length="443">
            <donor d_prob="0.913" d_score="0.98"/>
            <acceptor a_prob="0.995" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="19277" g_stop="19321" g_length="45"/>
          <reference_exon_boundary r_type="cDNA" r_start="1192" r_stop="1236" r_length="45" r_score="0.978"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="19322" i_stop="19588" i_length="267">
            <donor d_prob="0.958" d_score="0.98"/>
            <acceptor a_prob="0.991" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="19589" g_stop="19762" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="1237" r_stop="1410" r_length="174" r_score="0.994"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="19763" i_stop="20907" i_length="1145">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="20908" g_stop="22103" g_length="1196"/>
          <reference_exon_boundary r_type="cDNA" r_start="1411" r_stop="2618" r_length="1208" r_score="0.955"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="22104" i_stop="22955" i_length="852">
            <donor d_prob="0.000" d_score="0.94"/>
            <acceptor a_prob="0.666" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="22956" g_stop="22968" g_length="13"/>
          <reference_exon_boundary r_type="cDNA" r_start="2619" r_stop="2631" r_length="13" r_score="0.769"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="+" ref_id="SGN-E624233" ref_strand="+">
        <total_alignment_score>0.962</total_alignment_score>
        <cumulative_length_of_scored_exons>2564</cumulative_length_of_scored_exons>
        <coverage percentage="0.975" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E624233" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16004" e_stop="16260"/>
          <exon e_start="16780" e_stop="17404"/>
          <exon e_start="18076" e_stop="18140"/>
          <exon e_start="18542" e_stop="18619"/>
          <exon e_start="18723" e_stop="18833"/>
          <exon e_start="19277" e_stop="19321"/>
          <exon e_start="19589" e_stop="19762"/>
          <exon e_start="20908" e_stop="22103"/>
          <exon e_start="22956" e_stop="22968"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGTAATGGAAAATTCCATTGTTCTTCATACTGGAAATCAATTCCACCCCAGCTTACCCTTTTTCTCATTTAGGCCCAAAAAGTTATCTCGAATTCATGGCTCCAGTAGAGAGCAAATGTGGAGGATCAAGCGCGTTAAAGCAACAGGTGAAAATTCTGGGGAAGCTGCAAGTGCTGATGAATCGGATGATGCCTTACAGGTTACAATTGAAAAGAGCAAAAAGGTTTTAGCCATGCAACAGGACCTACTTCAACAGGTAACCCTTTTGGTACTCAATCATAAAGTGAAAAGAAAGATTTCTTTTTCCAGGTCAGAAAGATAAAGAAGTAAAAGATGTACTTGTTTTAGGGCCTTTTGACTGTTTTTCCTTAAATGCGGATACAAGGGATATAATTATCATTATATATGCTAATAATGAATAGAAATCCTGATTTAAGATATTAGACATGTTCTAATTTCTGTAAACGAAACAATCGATTTTTTCAAGAATGTCAAATTTGAAAATGAATCTATGTTTAAATAACTTAGAAATCAGTATGATAGGACTGTTTTCTGAGAATTTGTTTCAGTATGTTGTGGATAAAGATTGTAACCATGTTCTGATTTAGAAGAGGAGAAGTTCGCCTGTAGGATGATTTGTTGCTGTAGTTCATATGTTTTTTTGTTGGTTTAATTGTCTTCCTGAGCATTGCATATGTTTCAGTTTGCAATTTATCATAGTGGGTTTAGAAACACTATTTACATTGTCTTCATCCTTGAATTCTTTGCATATTAGATTGCAGAAAGAAGAAAAGTAGTCTCTTCAATAAAAAGCAGTCTTGCCGATGCTACTGGTACTTATGATGGTGGGAGTGGTAGCTTATCAGATGTTGATATCCCTGACGTGGATAAAGATTATAATGTTACTGTACCTAGTACTGCTGCTACTCCAATTACTGATGTCGATAAAAATACACCGCCTGCTATAAGCCAAGATTTTGTTGAAAGTAAAAGAGAAGTCAAAAGGGACCTGGCCGATGAAAGGGCACCCCCACTTTCAAGATCATCCATCACAGCCAGTAGCCAGACTTCCTCTACTGTAAGTTCCAAAAGAATATTGAATGTCCCTCCAGAAACTCCGAAGTTCAGTCAAGAGACACTTTTGAATGTGAATTCGCGTAAAAGTTTAGTCGATGTTCCTGGAAAGAAGATCCAGTCTTATATGCCTTCATTATGTAAAGAATCCTCAGCACAATCCCTTGTGGAAAAGAGGAATGAAAATCTTGAAGGATCAAGTGCTGAGGCAAACGAAGAGACTGAAGATCTTGTGAATATAGATGAGAAACCTCCTCCATTGGCCGGAACAAATGTTATGAACATTATTTTGGTGGCTTCAGAATGCGCTCCATGGTCTAAAACAGGTATATTTTACACTGGATATGTATCTTCTGTCCAGGGACAAATGCGTAGGAACTGCAAAAGAGTAGGACCAGCATTCAGTACTCCTTCGTCTCTAGATAAACAAGATAATTAATTAGTAGAAGGATTAACATATTATCATACCTATCAAAAGTATTATATGACATTTCCTTAGTAATGTGATAAAAGGCATTTAAGAAAAATGAAAAAATATCACTGATCGTCCAATTGAAATGAAAGGGTGAACATCAAAAGAAAAAGGATCTATTATTATCATACCTATCAAAAGTATTATGTGACATTTTCTTAATAATGTGATAAAAGGCATTTAAGAAAAATGAAAAACCATCACTAATCGTCCAAAGTGAAACGAATAGGTGAATGTCAAAAGAAAAAAGATCTATATTTTATCCTGCCTTTCTTCACTAATGTAGTATTGTTGCCTTCTGAATGGTTGAGGATGGGTGGTGGATTTGTTGGTTTCTCAAACTTTGATTTTGTCTGTTGACTTTTCTGTTATCTTCATTTAAAAACTACTGAGCTCTGTGCACGTATATATAATCATGACTCGTACACATTTTTCGTACTTCGATGTTGCATGAATTTTAGTGTGTTTATGTCTCTCGTTTCATATTAGTGCAAGCATATCTTTTACTTGTGAAGAGTTTTTTAGGTGGGCTTGGAGATGTTGCTGGAGCATTACCGAAAGCTTTGGCTCGACGTGGCCACAGAGTTATGGTAAGTAGTTTAATCCTTCACCTTGTGAATTTCTGGATTCATAAGAAATGATGTATCAAGTAGAATGTAACTCAGAGAGAAATTGTCTATGAAGTCTGTTCTGCGCGAGGTGTTATATTCTCTACCCGTCGTCTTTTTAACCACTGGACTATTTATAGATTCACAAGCTTTCCAAAAGATATGCTGTCTAACCAGATTATCGACACCATATGAACCTCTTGCTAAATCATATCATATAATAATTTTTTTGTGACAATATTTATTTCTTTTTGACACATCAAACAGACAACTTTATACATTGCTTAGTATTTAAGAATTTTGCCTTCTCATTCCAAACACATGGGATGTAAGTTATCTGACGCTGAAGTTTCCTTTTCTCCCCCCATTTCCCTGAAACTTAGGTTGTGGCACCTCGTTATGACAACTATCCTGAACCTCAAGATTCTGGTGTAAGAAAAATTTATAAAGTTCATGGTCAGGTATGGTTAACTGCATCAATTAGATGCAGCTTTTAACTTATGCTTGTGATTTCATGGCCACAAGACTATCCATATCTAAGCATTTAAGTTTTGAACTGTGCAGGATGTAGAAGTGACTTACTTCCAAGCTTTTATTGATGGTGTGGATTTTGTTTTCATTGACAGCCATATGTTTAGACACATTGGGAACAACATTTACGGAGGGAACCGTGTGGTAAATCCCGGCGCTCACTTTTCTTCTGAATTTTTAGTTTCATTTTGATCCTGGAATTTCAAACTCCTTGATTTACATTGAAATCTATTAATGAGTCCTCTGTATAATTGCCTGACATAATGTTTTCCCTTGTCACAAAATCTGGGCCTTATGGGATTGGGATGTCTTAGATGATTTTGTCTTCACTTTTCCTTTCTCTTTCTGGGTGGGGAGTTTAAGAGAGAGAGGTTTAAAATGATTTTCTGTACAAACAAGAAGACTGTGATAACGATCCCTTTGGTGAGCTCTGGTATTGACTTTGAGCTACCTTCTTTGCATTGTACATCATTCATTGATGTATCAGTCTTGAAGCTTTATTTGAATTGTTTATCCCCTTCTCATAAATAGTTTTGGCGGTACCTATCTGGCTGTTTTTAACTTCTTTTTTTCTCTTCCTGTTGCAGGATATTTTAAAGCGCATGGTTTTATTTTGCAAAGCAGCGATTGAGGTATGATTTCTGATGTTTCAGGAACCTTGCACTAATTATTGACCAATTGCTCCCTACACTATCTGTCTACGATACGCCACAGTGGCCAGAAAAAAGACTCTGCAAACCTTAAATCAATCTTTGTAACCAACACTGTAAAATAAACCTAGCCATTCTATTTGGGCATGATTATCCATGTTTACTTCATACCTGCACACCCTGTTGTAACATTTTGCCCACTACTATTGCATTGATTTCAAAATACATTTTACTGATTCACAATTTCAGGTTCCTTGGCATGTTCCATGTGGTGGGGTCTGCTATGGAGATGGAAACTTAGTGTTCATTGCTAATGATTGGCATACTGCTTTATTGCCAGTATATCTGAAAGCTTATTATCGTGACAATGGAATTATGAACTATACAAGATCTGTCCTGGTGATTCATAACATCGCTCATCAGGTCAGTTTCATCAGCAACTAAAGCAGTTTTCTAATCCACCTGTGCATTTTTATTTCCAATAATTTAGCAGTATAGCCATTTTTTAAGTTCCAAAGGTTGGTCGTATATCATGATTTCTATGACTTCTAAGCATAAGATTTAAAATAAATGATTACCTTGATAGGTAAACCGATGGGTGGGGCCCATCATCCACTGAGTTTTGAACTGTGGAGGCCTCGAAAATTTCTCGGTTATCAAAATAATTTAATAACGATGACTAGTTTGATATTATATATCTACTAGGTGTTCGTGGGATAATTATTACTTCCGCGTCACTAAGTTCAATAGCTTAGGTACCCACTGAGAGTACCATATCAGGCTATCAATAAATCTAGTTACAGGTAAAGCATTTTTTATCATGCACAGACCATACTCAGACTTGTTTAGGAGTATTGCCTGATAAGTGAAATTCTTTGAAAAGTTGTTTTCTCATCTCTGTGCGTGAGCCGGTTGAAGAATATGCTTTTTAAGCTTCATACTGGATTATGCTTTGATTTGTAATGATCTACCACAATATGAGATCAACCCCACAAAAAACAAAAGAAAATCTCGAAGAAGTTACCAAAGATATGTCGTACATGAAGTCTTATATTAGCAATGTACAACTCTACCTTTTCCTCATGTGCTAAGGTTAAGCACACTGATGCATTTTGCTTCTACTACTAGTTATCATCTTTTTATTAAATTTTTTCTTGCCTCATTTGATATGTATCTGAATACAACTTTCTTTTTATAATGAATTTTCTTCATGAAAGTTACAAAGAGCGCTGTGGAGTGAGCCAAGATTTTATGCATGTAATGTAAGCAGCAGAGAACTAGAAATACTATGTTCGTCCAATTAAACATGACCTACTTTGACCTGTGCAATTGTTTTCAAATATCTGGTAGATTATAACTTTTAAGTATAATGTGAAGAGTGTAAAATAATAATTTGGAATATAAAACAGTAGAGTAATTGGAGTTATCTCTATCCAAGTTCTGTATTTTGTTAGTATTTTCTGATTTTTGTCATTTATTTTATCTTTTTGTAACGTGAATAAGGGTTATAGCAATCTTAGCCAGCTTTCTATCATTTTCAGCTCTATAATTTGTTCCATCTCATGCAGGGTCGTGGTCCTTTGGAGGATTTTTCATATGTAGATCTTCCACCACACTATATGGACCCTTTCAAATTGTATGACCCAGTAGGAGGTGAGCATTTCAACATTTTTGCGGCTGGTCTAAAGACAGCAGATCGTGTAGTTACAGTTAGTCATGGATATTCATGGGAACTCAAGACTTCCGAAGGTGGTTGGGGATTGCATCAGATAATTAATGAGAACGATTGGAAATTACGGGGTATTGTGAATGGGATTGATACAAAAGAGTGGAACCCTGAGTTGGACGTTCACTTACAGTCAGATGGTTACGTGAACTACTCCTTGGACACACTGCAGACTGGCAAGCCTCAATGTAAAGCTGCATTGCAGAAGGAACTTGGTTTACCAGTTCGTGATGATGTCCCACTGATTGGTTTCATTGGGAGGCTTGACCCACAAAAGGGTGTTGATCTGATTGCTGAGGCAGTGCCTTGGATGATGGGTCAGGATGTACAACTGGTCATGTTGGGTACGGGGAGGCCTGACCTTGAACAGATGCTAAGGCAATTTGAGTGTCAACACAATGATAAAATTAGAGGATGGGTTGGTTTCTCTGTGAAGACTTCTCATCGTATAACTGCTGGTGCAGACATTCTGCTCATGCCTTCTAGATTTGAGCCTTGTGGACTGAACCAGCTTTATGCAATGACATATGGGACTATTCCTGTTGTTCATGCAGTAGGAGGACTCAGAGATACTGTGCAGCCCTTTGATCCTTTTAATGAGTCAGGACTGGGGTGGACCTTCAGTAGGGCTGAAGCTAACCAGCTGATCCACGCATTAGGAAATTGCTTGCTGACTTATCGTGAGTACAAAAAGAGTTGGGAGGGGATTCAGACGCGTTGTATGACACAAGACTTAAGTTGGGATAATGCTGCTCAGAACTATGAAGAAGTTCTCATTGCTGCTAAGTATCAGTGGTGAGGTTCATTACTTGTAGATATTT-GGG-----GG---TTTTATCAAGTTCCAATGATGGCATTTCAGAGACATGTTACTGGTATCGCCACGAGA-G--G-ATGCAACAAGTTGGTTAACTATCATACTACTACCACGTCAGGAATGATTGCCGCGCTTGATCATATAATCATGTATATACTCTATTTTGTTAGCAAAATGTAGTTACATGTTGCAATTTCTACTCTATATTTTTTGGAAGTTTTAGTTGTCAAATAATCAGCCACCTCAATTTTTGTTTAGATGTATTCTCTCTCAATAATAAAATTGACCGACTCATCTAAACCACAATCAATCACTTCTGATGCTTTCCTTCAAGTAAAGCTTTTAGCGGACAATTGTTTCATATTGACAGTTCTCATGAGATCCACTAGCAGTATCCGTATTTATAAGAAGGAAAAAGTCTGATAATGCCATTGTGATTCATATATATTAGTGTTATCTTAAATGACTCATAATATTTTATTTTTTTTCTAATGGAAGTGATTTATTTTTAAAAAATAAATATAATTCATATGAGTACATTTAATCATTTTCGCACATTTTTTGACTTTTTTTTAATCTCTATGACAAATTTAAATTTTATTATTTTGCTAGTTAAATTTATTTATGTTTCATTAATTTTCTTGTAAAATTTATCATAGATGTTTTTTTTCAAATACAAAAAAATAAACTAGAGTAAGCCGAAAAAATAGTTTTAAATTATAATTAGCCACAGAAAAACAGTTTTAAAAATTTCTTCACGAATGAAAGAAAAAAATAAAATATAAATAAACAACTTTAATTATGATAATCAAAGAAGTAAAAAAAATTATGTATGAGAAGGATCTTATACATCACTACATGATTTTTTCTTTTTTAAAAAAATAGAAGTAAAAAGTTTGAAAATTATATCAAACGTTTTTCCCTTACTATAATACTACATACTTTACATCAAACAGGAAAACCTATTTATATATAATTTCTTATTATAAAAATCCTATTTAGACATGAATAAACAACTTCAGCCGTCCCTATTTACTTGTTCAACATTTTTTTTAATTGTCCTTATTTACTTGTCTATTTAGACAAATCAAAAAA</genome_strand>
        <mrna_strand>CTGTAATGGAGAATTCCATTCTTCTTCATAGTGGAAATCAGTTCCACCCCAACTTACCCCTTTTAGCACTTAGGCCCAAAAAATTATCTCTAATTCATGGCTCCAGTAGAGAGCAAATGTGGAGGATCAAGCGCGTTAAAGCAACAGGTGAAAATTCTGGGGAAGCTGCAAGTGCTGATGAATCGAATGATGCCTTACAGGTTACAATTGAAAAGAGCAAAAAGGTTTTAGCCATGCAACAGGACCTACTTCAACAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCAGAAAGAAGAAAAGTAGTCTCTTCAATAAAAAGCAGTCTTGCCAATGCCAAAGGTACTTATGATGGTGGGAGTGGTAGCTTATCAGATGTTGATATCCCTGACGTGGATAAAGATTATAATGTTACTGTACCTAGTACTGCTGCTACTCCAATTACTGATGTCGATAAAAATACACCGCCTGCTATAAGCCAAGATTTTGTTGAAAGTAAAAGAGAAATCAAAAGGGACCTGGCCGATGAAAGGGCACCCCCACTGTCGAGATCATCTATCACAGCCAGTAGCCAGATTTCCTCTACTGTAAGTTCCAAAAGAACGTTGAATGTCCCTCCAGAAACTCCGAAGTCCAGTCAAGAGACACTTTTGGATGTGAATTCACGCAAAAGTTTAGTAGATGTTCCTGGAAAGAAGATCCAGTCTTATATGCCTTCATTACGTAAAGAATCCTCAG--C-ATCCCATGTGGAACAGAGGAATGAAAATCTTGAAGGATCAAGTGCTGAGGCAAACGAAGAGACTGAAGATCCTGTGAATATAGATGAGAAACCCCCTCCATTGGCAGGAACAAATGTTATGAACATTATTTTGGTGGCTTCAGAATGCGCTCCATGGTCTAAAACAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGGCTTGGAGATGTTGCTGGAGCATTACCCAAAGCTTTGGCTCGACGTGGCCACAGAGTTATG.................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTGGCACCTCGTTATGACAACTATCCTGAACCTCAAGATTCTGGTGTAAGAAAAATTTATAAAGTTGATGGTCAG.......................................................................................................GATGTGGAAGTGACTTACTTCCAAGCTTTTATTGATGGTGTGGATTTTGTTTTCATTGACAGTCATATGTTTAGACACATTGGGAACAACATTTACGGAGGGAACCGTGTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................GATATTTTAAAACGCATGGTTTTATTTTGCAAAGCAGCGATTGAG...........................................................................................................................................................................................................................................................................GTTCCTTGGCATGTTCCATGTGGTGGGGTCTGCTATGGAGATGGAAATTTAGTGTTCATTGCTAATGATTGGCATACTGCTTTATTGCCAGTATATCTGAAAGCTTATTATCGTGACAATGGAATTATGAACTATACAAGATCTGTCCTGGTGATTCATAACATCGCTCATCAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTCGTGGTCCTTTGGAGGATTTTTCATATGTAGATCTTCCACCACACTATATGGACCCTTTCAAGTTGTATGACCCAGTAGGAGGTGAGCATTTCAACATTTTTGCGGCTGGTCTAAAGACAGCAGATCGTGTAGTTACAGTTAGTCATGGATATTCATGGGAACTAAAGACTTCCCAAGGTGGTTGGGGATTGCATCAGATAATTAATGAGAACGATTGGAAATTACAGGGTATTGTGAATGGGATTGATACAAAAGAGTGGAACCCTGAGTTGGACGTTCACTTACAGTCAGATGGTTACATGAACTACTCCTTGGACACGCTACAGACTGGCAAGCCTCAATGTAAAGCTGCATTGCAGAAGGAACTTGGTTTACCAGTTCGTGATGATGTCCCACTGATCGGTTTCATTGGGAGGCTTGACCCACAAAAGGGTGTTGATCTGATTGCTGAGGCAGTGCCTTGGATGATGGGTCAGGATGTACAACTGGTCATGTTGGGGACGGGGAGGCGTGACCTTGAACAGATGCTAAGGCAATTTGAGTGTCAACACAATGATAAAATTAGAGGATGGGTTGGTTTCTCTGTGAAGACTTCTCATCGTATAACTGCTGGTGCAGACATTCTGCTCATGCCTTCTAGATTTGAGCCTTGCGGACTGAACCAGCTTTATGCAATGAAATATGGGACTATTCCTGTTGTTCATGCAGTAGGAGGACTCAGAGATACTGTGCAGCCCTTTGATCCTTTTAATGAGTCAGGACTGGGGTGGACCTTCAGTAGGGCTGAAGCTAGCCAGCTGATCCACGCATTAGGAAATTGCTTACTGACTTATCGTGAGTACAAAAAGAGTTGGGAGGGGATTCAGACACGTTGTATGACACAAGACTTAAGTTGGGATAATGCTGCTCAGAACTATGAAGAAGTTCTCATCGCTGCTAAGTATCAGTGGTGAGGTTCATTACTTGTAGATATTTGGGGATTTTGGCCATTGTATCAAGTTCTAATGATGGGATTTCAGAGACATGTTTCTGGTATCGACACGAGAGGATGCATGCAACAAGTTGGCTAACTATCATACTACTACCACGTCAGGAATGATTGCCGCACTTGATCATGTAATCATGTATATACTCTATTTTGTTTGCAAAATGTAGTTACATGTTGCAATTTCTACTCTATATTTGTTGAAAGTTTTAG-TGTCAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E487327" ref_strand="+" ref_description="SGN-E487327 [cSTE-25-M19]">
      <seq>ctattatccctgtgaacttcatcttttgtgatttctactgtaatggagaattccattcttcttcatagtggaaatcagttccaccccaacttaccccttttagcacttaggcccaaaaaattatctctaattcatggctccagtagagagcaaatgtggaggatcaagcgcgttaaagcaacaggtgaaaattctggggaagctgcaagtgctgatgaatcgaatgatgccttacaggttacaattgaaaagagcaaaaaggttttagccatgcaacaggacctacttcaacagattgcagaaagaagaaaagtagtctcttcaataaaaagcagtcttgccaatgccaaaggtacttatgatggtgggagtggtagcttatcagatgttgatatccctgacgtggataaagattataatgttactgtacctagtactgctgctactccaattactgatgtcgataaaaatacaccgcctgctataagccaagattttgttgaaagtaaaagagaaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="+" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="15678" stop="17303"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16004" g_stop="16260" g_length="257"/>
          <reference_exon_boundary r_type="cDNA" r_start="38" r_stop="294" r_length="257" r_score="0.953"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16261" i_stop="16779" i_length="519">
            <donor d_prob="0.863" d_score="1.00"/>
            <acceptor a_prob="0.912" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16780" g_stop="17003" g_length="224"/>
          <reference_exon_boundary r_type="cDNA" r_start="295" r_stop="518" r_length="224" r_score="0.978"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="+" ref_id="SGN-E487327" ref_strand="+">
        <total_alignment_score>0.965</total_alignment_score>
        <cumulative_length_of_scored_exons>481</cumulative_length_of_scored_exons>
        <coverage percentage="0.929" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E487327" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16004" e_stop="16260"/>
          <exon e_start="16780" e_stop="17003"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGTAATGGAAAATTCCATTGTTCTTCATACTGGAAATCAATTCCACCCCAGCTTACCCTTTTTCTCATTTAGGCCCAAAAAGTTATCTCGAATTCATGGCTCCAGTAGAGAGCAAATGTGGAGGATCAAGCGCGTTAAAGCAACAGGTGAAAATTCTGGGGAAGCTGCAAGTGCTGATGAATCGGATGATGCCTTACAGGTTACAATTGAAAAGAGCAAAAAGGTTTTAGCCATGCAACAGGACCTACTTCAACAGGTAACCCTTTTGGTACTCAATCATAAAGTGAAAAGAAAGATTTCTTTTTCCAGGTCAGAAAGATAAAGAAGTAAAAGATGTACTTGTTTTAGGGCCTTTTGACTGTTTTTCCTTAAATGCGGATACAAGGGATATAATTATCATTATATATGCTAATAATGAATAGAAATCCTGATTTAAGATATTAGACATGTTCTAATTTCTGTAAACGAAACAATCGATTTTTTCAAGAATGTCAAATTTGAAAATGAATCTATGTTTAAATAACTTAGAAATCAGTATGATAGGACTGTTTTCTGAGAATTTGTTTCAGTATGTTGTGGATAAAGATTGTAACCATGTTCTGATTTAGAAGAGGAGAAGTTCGCCTGTAGGATGATTTGTTGCTGTAGTTCATATGTTTTTTTGTTGGTTTAATTGTCTTCCTGAGCATTGCATATGTTTCAGTTTGCAATTTATCATAGTGGGTTTAGAAACACTATTTACATTGTCTTCATCCTTGAATTCTTTGCATATTAGATTGCAGAAAGAAGAAAAGTAGTCTCTTCAATAAAAAGCAGTCTTGCCGATGCTACTGGTACTTATGATGGTGGGAGTGGTAGCTTATCAGATGTTGATATCCCTGACGTGGATAAAGATTATAATGTTACTGTACCTAGTACTGCTGCTACTCCAATTACTGATGTCGATAAAAATACACCGCCTGCTATAAGCCAAGATTTTGTTGAAAGTAAAAGAGAAGT</genome_strand>
        <mrna_strand>CTGTAATGGAGAATTCCATTCTTCTTCATAGTGGAAATCAGTTCCACCCCAACTTACCCCTTTTAGCACTTAGGCCCAAAAAATTATCTCTAATTCATGGCTCCAGTAGAGAGCAAATGTGGAGGATCAAGCGCGTTAAAGCAACAGGTGAAAATTCTGGGGAAGCTGCAAGTGCTGATGAATCGAATGATGCCTTACAGGTTACAATTGAAAAGAGCAAAAAGGTTTTAGCCATGCAACAGGACCTACTTCAACAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCAGAAAGAAGAAAAGTAGTCTCTTCAATAAAAAGCAGTCTTGCCAATGCCAAAGGTACTTATGATGGTGGGAGTGGTAGCTTATCAGATGTTGATATCCCTGACGTGGATAAAGATTATAATGTTACTGTACCTAGTACTGCTGCTACTCCAATTACTGATGTCGATAAAAATACACCGCCTGCTATAAGCCAAGATTTTGTTGAAAGTAAAAGAGAAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E446922" ref_strand="+" ref_description="SGN-E446922 [cSTA-23-F9]">
      <seq>atcacagccagtagccagatttcctctactgtaagtgccaaaagaacgttgaatgtccctccagaaactccaaagtccagtcaagagacacttttggatgtgaattcacgcaaaagtttagtagatgttcctggaaagaagatccagtcttatatgccttcattacgtaaagaatcctcagcatcccatgtggaacagaggaatgaaaatcttgaaggatcaagtgctgaggcaaacgaagagactgaagatcctgtgaatatagatgagaaaccccctccattggcaggaacaaatgttatgaacattattttggtggcttcagaatgcgctccatggtctaaaacaagtgggcttggagatgttgctggagcattacccaaagctttggctcgacgtggccacagagttatggttgtggcacctcgttatga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="+" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="16753" stop="18861"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17053" g_stop="17404" g_length="352"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="349" r_length="349" r_score="0.943"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="17405" i_stop="18075" i_length="671">
            <donor d_prob="0.908" d_score="0.98"/>
            <acceptor a_prob="0.634" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18076" g_stop="18140" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="350" r_stop="414" r_length="65" r_score="0.985"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="18141" i_stop="18541" i_length="401">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.761" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="18542" g_stop="18561" g_length="20"/>
          <reference_exon_boundary r_type="cDNA" r_start="415" r_stop="434" r_length="20" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="+" ref_id="SGN-E446922" ref_strand="+">
        <total_alignment_score>0.950</total_alignment_score>
        <cumulative_length_of_scored_exons>437</cumulative_length_of_scored_exons>
        <coverage percentage="1.007" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E446922" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17053" e_stop="17404"/>
          <exon e_start="18076" e_stop="18140"/>
          <exon e_start="18542" e_stop="18561"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCACAGCCAGTAGCCAGACTTCCTCTACTGTAAGTTCCAAAAGAATATTGAATGTCCCTCCAGAAACTCCGAAGTTCAGTCAAGAGACACTTTTGAATGTGAATTCGCGTAAAAGTTTAGTCGATGTTCCTGGAAAGAAGATCCAGTCTTATATGCCTTCATTATGTAAAGAATCCTCAGCACAATCCCTTGTGGAAAAGAGGAATGAAAATCTTGAAGGATCAAGTGCTGAGGCAAACGAAGAGACTGAAGATCTTGTGAATATAGATGAGAAACCTCCTCCATTGGCCGGAACAAATGTTATGAACATTATTTTGGTGGCTTCAGAATGCGCTCCATGGTCTAAAACAGGTATATTTTACACTGGATATGTATCTTCTGTCCAGGGACAAATGCGTAGGAACTGCAAAAGAGTAGGACCAGCATTCAGTACTCCTTCGTCTCTAGATAAACAAGATAATTAATTAGTAGAAGGATTAACATATTATCATACCTATCAAAAGTATTATATGACATTTCCTTAGTAATGTGATAAAAGGCATTTAAGAAAAATGAAAAAATATCACTGATCGTCCAATTGAAATGAAAGGGTGAACATCAAAAGAAAAAGGATCTATTATTATCATACCTATCAAAAGTATTATGTGACATTTTCTTAATAATGTGATAAAAGGCATTTAAGAAAAATGAAAAACCATCACTAATCGTCCAAAGTGAAACGAATAGGTGAATGTCAAAAGAAAAAAGATCTATATTTTATCCTGCCTTTCTTCACTAATGTAGTATTGTTGCCTTCTGAATGGTTGAGGATGGGTGGTGGATTTGTTGGTTTCTCAAACTTTGATTTTGTCTGTTGACTTTTCTGTTATCTTCATTTAAAAACTACTGAGCTCTGTGCACGTATATATAATCATGACTCGTACACATTTTTCGTACTTCGATGTTGCATGAATTTTAGTGTGTTTATGTCTCTCGTTTCATATTAGTGCAAGCATATCTTTTACTTGTGAAGAGTTTTTTAGGTGGGCTTGGAGATGTTGCTGGAGCATTACCGAAAGCTTTGGCTCGACGTGGCCACAGAGTTATGGTAAGTAGTTTAATCCTTCACCTTGTGAATTTCTGGATTCATAAGAAATGATGTATCAAGTAGAATGTAACTCAGAGAGAAATTGTCTATGAAGTCTGTTCTGCGCGAGGTGTTATATTCTCTACCCGTCGTCTTTTTAACCACTGGACTATTTATAGATTCACAAGCTTTCCAAAAGATATGCTGTCTAACCAGATTATCGACACCATATGAACCTCTTGCTAAATCATATCATATAATAATTTTTTTGTGACAATATTTATTTCTTTTTGACACATCAAACAGACAACTTTATACATTGCTTAGTATTTAAGAATTTTGCCTTCTCATTCCAAACACATGGGATGTAAGTTATCTGACGCTGAAGTTTCCTTTTCTCCCCCCATTTCCCTGAAACTTAGGTTGTGGCACCTCGTTATGA</genome_strand>
        <mrna_strand>ATCACAGCCAGTAGCCAGATTTCCTCTACTGTAAGTGCCAAAAGAACGTTGAATGTCCCTCCAGAAACTCCAAAGTCCAGTCAAGAGACACTTTTGGATGTGAATTCACGCAAAAGTTTAGTAGATGTTCCTGGAAAGAAGATCCAGTCTTATATGCCTTCATTACGTAAAGAATCCTCAG--C-ATCCCATGTGGAACAGAGGAATGAAAATCTTGAAGGATCAAGTGCTGAGGCAAACGAAGAGACTGAAGATCCTGTGAATATAGATGAGAAACCCCCTCCATTGGCAGGAACAAATGTTATGAACATTATTTTGGTGGCTTCAGAATGCGCTCCATGGTCTAAAACAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGGCTTGGAGATGTTGCTGGAGCATTACCCAAAGCTTTGGCTCGACGTGGCCACAGAGTTATG.................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTGGCACCTCGTTATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E703399" ref_strand="+" ref_description="SGN-E703399 [FA21BE11]">
      <seq>agaagatccagtcttatatgccttcattatgtaaagaatcctcagcacaatcccttgtggaaaagaggaatgaaaatcttgaaggatcaagtgctgaggcaaacgaagagactgaagatcttgtgaatatagatgagaaacctcctccattggccggaacaaatgttatgaacattattttggtggcttcagaatgcgctccatggtctaaaacaggtgggcttggagatgttgctggagcattaccgaaagctttggctcgacgtggccacagagttatggttgtggcacctcgttatgacaactatcctgaacctcaagattctggtgtaagaaaaatttataaagttcatggtcaggatgtagaagtgacttacttccaagcttttattgatggtgtggattttgttttcattgacagccatatgtttagacacattgggaacaacatttacggagggaaccgtgtggatattttaaagcgcatggttttattttgcaaagcagcgattgaggttccttggcatgttccatgtggtggggtctgctatggagatggaaacttagtgttcattgctaatgattggcatactgctttattgccagtatatctgaaagcttattatcgtgacaatggaattatgaactatacaagatctgtcctggtgattcataacatcgctcatcagggtcgtggtcctttggaggatttttcatatgtagatcttccaccacactatatggaccctttcaaattgtatgacccagtaggaggtgagcatttcaacattttttgcggctggtctaaagacagcagatcgtgtagttacagtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="+" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="16889" stop="21351"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17189" g_stop="17404" g_length="216"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="216" r_length="216" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="17405" i_stop="18075" i_length="671">
            <donor d_prob="0.908" d_score="1.00"/>
            <acceptor a_prob="0.634" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18076" g_stop="18140" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="217" r_stop="281" r_length="65" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="18141" i_stop="18541" i_length="401">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.761" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="18542" g_stop="18619" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="282" r_stop="359" r_length="78" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="18620" i_stop="18722" i_length="103">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.855" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="18723" g_stop="18833" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="360" r_stop="470" r_length="111" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="18834" i_stop="19276" i_length="443">
            <donor d_prob="0.913" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="19277" g_stop="19321" g_length="45"/>
          <reference_exon_boundary r_type="cDNA" r_start="471" r_stop="515" r_length="45" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="19322" i_stop="19588" i_length="267">
            <donor d_prob="0.958" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="19589" g_stop="19762" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="516" r_stop="689" r_length="174" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="19763" i_stop="20907" i_length="1145">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="20908" g_stop="21051" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="690" r_stop="834" r_length="145" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="+" ref_id="SGN-E703399" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>833</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E703399" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17189" e_stop="17404"/>
          <exon e_start="18076" e_stop="18140"/>
          <exon e_start="18542" e_stop="18619"/>
          <exon e_start="18723" e_stop="18833"/>
          <exon e_start="19277" e_stop="19321"/>
          <exon e_start="19589" e_stop="19762"/>
          <exon e_start="20908" e_stop="21051"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAGATCCAGTCTTATATGCCTTCATTATGTAAAGAATCCTCAGCACAATCCCTTGTGGAAAAGAGGAATGAAAATCTTGAAGGATCAAGTGCTGAGGCAAACGAAGAGACTGAAGATCTTGTGAATATAGATGAGAAACCTCCTCCATTGGCCGGAACAAATGTTATGAACATTATTTTGGTGGCTTCAGAATGCGCTCCATGGTCTAAAACAGGTATATTTTACACTGGATATGTATCTTCTGTCCAGGGACAAATGCGTAGGAACTGCAAAAGAGTAGGACCAGCATTCAGTACTCCTTCGTCTCTAGATAAACAAGATAATTAATTAGTAGAAGGATTAACATATTATCATACCTATCAAAAGTATTATATGACATTTCCTTAGTAATGTGATAAAAGGCATTTAAGAAAAATGAAAAAATATCACTGATCGTCCAATTGAAATGAAAGGGTGAACATCAAAAGAAAAAGGATCTATTATTATCATACCTATCAAAAGTATTATGTGACATTTTCTTAATAATGTGATAAAAGGCATTTAAGAAAAATGAAAAACCATCACTAATCGTCCAAAGTGAAACGAATAGGTGAATGTCAAAAGAAAAAAGATCTATATTTTATCCTGCCTTTCTTCACTAATGTAGTATTGTTGCCTTCTGAATGGTTGAGGATGGGTGGTGGATTTGTTGGTTTCTCAAACTTTGATTTTGTCTGTTGACTTTTCTGTTATCTTCATTTAAAAACTACTGAGCTCTGTGCACGTATATATAATCATGACTCGTACACATTTTTCGTACTTCGATGTTGCATGAATTTTAGTGTGTTTATGTCTCTCGTTTCATATTAGTGCAAGCATATCTTTTACTTGTGAAGAGTTTTTTAGGTGGGCTTGGAGATGTTGCTGGAGCATTACCGAAAGCTTTGGCTCGACGTGGCCACAGAGTTATGGTAAGTAGTTTAATCCTTCACCTTGTGAATTTCTGGATTCATAAGAAATGATGTATCAAGTAGAATGTAACTCAGAGAGAAATTGTCTATGAAGTCTGTTCTGCGCGAGGTGTTATATTCTCTACCCGTCGTCTTTTTAACCACTGGACTATTTATAGATTCACAAGCTTTCCAAAAGATATGCTGTCTAACCAGATTATCGACACCATATGAACCTCTTGCTAAATCATATCATATAATAATTTTTTTGTGACAATATTTATTTCTTTTTGACACATCAAACAGACAACTTTATACATTGCTTAGTATTTAAGAATTTTGCCTTCTCATTCCAAACACATGGGATGTAAGTTATCTGACGCTGAAGTTTCCTTTTCTCCCCCCATTTCCCTGAAACTTAGGTTGTGGCACCTCGTTATGACAACTATCCTGAACCTCAAGATTCTGGTGTAAGAAAAATTTATAAAGTTCATGGTCAGGTATGGTTAACTGCATCAATTAGATGCAGCTTTTAACTTATGCTTGTGATTTCATGGCCACAAGACTATCCATATCTAAGCATTTAAGTTTTGAACTGTGCAGGATGTAGAAGTGACTTACTTCCAAGCTTTTATTGATGGTGTGGATTTTGTTTTCATTGACAGCCATATGTTTAGACACATTGGGAACAACATTTACGGAGGGAACCGTGTGGTAAATCCCGGCGCTCACTTTTCTTCTGAATTTTTAGTTTCATTTTGATCCTGGAATTTCAAACTCCTTGATTTACATTGAAATCTATTAATGAGTCCTCTGTATAATTGCCTGACATAATGTTTTCCCTTGTCACAAAATCTGGGCCTTATGGGATTGGGATGTCTTAGATGATTTTGTCTTCACTTTTCCTTTCTCTTTCTGGGTGGGGAGTTTAAGAGAGAGAGGTTTAAAATGATTTTCTGTACAAACAAGAAGACTGTGATAACGATCCCTTTGGTGAGCTCTGGTATTGACTTTGAGCTACCTTCTTTGCATTGTACATCATTCATTGATGTATCAGTCTTGAAGCTTTATTTGAATTGTTTATCCCCTTCTCATAAATAGTTTTGGCGGTACCTATCTGGCTGTTTTTAACTTCTTTTTTTCTCTTCCTGTTGCAGGATATTTTAAAGCGCATGGTTTTATTTTGCAAAGCAGCGATTGAGGTATGATTTCTGATGTTTCAGGAACCTTGCACTAATTATTGACCAATTGCTCCCTACACTATCTGTCTACGATACGCCACAGTGGCCAGAAAAAAGACTCTGCAAACCTTAAATCAATCTTTGTAACCAACACTGTAAAATAAACCTAGCCATTCTATTTGGGCATGATTATCCATGTTTACTTCATACCTGCACACCCTGTTGTAACATTTTGCCCACTACTATTGCATTGATTTCAAAATACATTTTACTGATTCACAATTTCAGGTTCCTTGGCATGTTCCATGTGGTGGGGTCTGCTATGGAGATGGAAACTTAGTGTTCATTGCTAATGATTGGCATACTGCTTTATTGCCAGTATATCTGAAAGCTTATTATCGTGACAATGGAATTATGAACTATACAAGATCTGTCCTGGTGATTCATAACATCGCTCATCAGGTCAGTTTCATCAGCAACTAAAGCAGTTTTCTAATCCACCTGTGCATTTTTATTTCCAATAATTTAGCAGTATAGCCATTTTTTAAGTTCCAAAGGTTGGTCGTATATCATGATTTCTATGACTTCTAAGCATAAGATTTAAAATAAATGATTACCTTGATAGGTAAACCGATGGGTGGGGCCCATCATCCACTGAGTTTTGAACTGTGGAGGCCTCGAAAATTTCTCGGTTATCAAAATAATTTAATAACGATGACTAGTTTGATATTATATATCTACTAGGTGTTCGTGGGATAATTATTACTTCCGCGTCACTAAGTTCAATAGCTTAGGTACCCACTGAGAGTACCATATCAGGCTATCAATAAATCTAGTTACAGGTAAAGCATTTTTTATCATGCACAGACCATACTCAGACTTGTTTAGGAGTATTGCCTGATAAGTGAAATTCTTTGAAAAGTTGTTTTCTCATCTCTGTGCGTGAGCCGGTTGAAGAATATGCTTTTTAAGCTTCATACTGGATTATGCTTTGATTTGTAATGATCTACCACAATATGAGATCAACCCCACAAAAAACAAAAGAAAATCTCGAAGAAGTTACCAAAGATATGTCGTACATGAAGTCTTATATTAGCAATGTACAACTCTACCTTTTCCTCATGTGCTAAGGTTAAGCACACTGATGCATTTTGCTTCTACTACTAGTTATCATCTTTTTATTAAATTTTTTCTTGCCTCATTTGATATGTATCTGAATACAACTTTCTTTTTATAATGAATTTTCTTCATGAAAGTTACAAAGAGCGCTGTGGAGTGAGCCAAGATTTTATGCATGTAATGTAAGCAGCAGAGAACTAGAAATACTATGTTCGTCCAATTAAACATGACCTACTTTGACCTGTGCAATTGTTTTCAAATATCTGGTAGATTATAACTTTTAAGTATAATGTGAAGAGTGTAAAATAATAATTTGGAATATAAAACAGTAGAGTAATTGGAGTTATCTCTATCCAAGTTCTGTATTTTGTTAGTATTTTCTGATTTTTGTCATTTATTTTATCTTTTTGTAACGTGAATAAGGGTTATAGCAATCTTAGCCAGCTTTCTATCATTTTCAGCTCTATAATTTGTTCCATCTCATGCAGGGTCGTGGTCCTTTGGAGGATTTTTCATATGTAGATCTTCCACCACACTATATGGACCCTTTCAAATTGTATGACCCAGTAGGAGGTGAGCATTTCAACA-TTTTTGCGGCTGGTCTAAAGACAGCAGATCGTGTAGTTACAGTT</genome_strand>
        <mrna_strand>AGAAGATCCAGTCTTATATGCCTTCATTATGTAAAGAATCCTCAGCACAATCCCTTGTGGAAAAGAGGAATGAAAATCTTGAAGGATCAAGTGCTGAGGCAAACGAAGAGACTGAAGATCTTGTGAATATAGATGAGAAACCTCCTCCATTGGCCGGAACAAATGTTATGAACATTATTTTGGTGGCTTCAGAATGCGCTCCATGGTCTAAAACAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGGCTTGGAGATGTTGCTGGAGCATTACCGAAAGCTTTGGCTCGACGTGGCCACAGAGTTATG.................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTGGCACCTCGTTATGACAACTATCCTGAACCTCAAGATTCTGGTGTAAGAAAAATTTATAAAGTTCATGGTCAG.......................................................................................................GATGTAGAAGTGACTTACTTCCAAGCTTTTATTGATGGTGTGGATTTTGTTTTCATTGACAGCCATATGTTTAGACACATTGGGAACAACATTTACGGAGGGAACCGTGTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................GATATTTTAAAGCGCATGGTTTTATTTTGCAAAGCAGCGATTGAG...........................................................................................................................................................................................................................................................................GTTCCTTGGCATGTTCCATGTGGTGGGGTCTGCTATGGAGATGGAAACTTAGTGTTCATTGCTAATGATTGGCATACTGCTTTATTGCCAGTATATCTGAAAGCTTATTATCGTGACAATGGAATTATGAACTATACAAGATCTGTCCTGGTGATTCATAACATCGCTCATCAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTCGTGGTCCTTTGGAGGATTTTTCATATGTAGATCTTCCACCACACTATATGGACCCTTTCAAATTGTATGACCCAGTAGGAGGTGAGCATTTCAACATTTTTTGCGGCTGGTCTAAAGACAGCAGATCGTGTAGTTACAGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E379910" ref_strand="+" ref_description="SGN-E379910 [TUS-1-M12]">
      <seq>caaacgaagagactgaagatcttgtgaatatagatgagaaacctcctccattggccggaacaaatgttatgaacattattttggtggcttcagaatgcgctccatggtctaaaacaggtgggcttggagatgttgctggagcattaccgaaagctttggctcgacgtggccacagagttatggttgtggcacctcgttatgacaactatcctgaacctcaagattctggtgtaagaaaaatttataaagttcatggtcaggatgtagaagtgacttacttccaagcttttattgatggtgtggattttgttttcattgacagccatatgtttagacacattgggaacaacatttacggagggaaccgtgtggatattttaaagcgcatggttttattttgcaaagcagcgattgaggttccttggcatgttccatgtggtggggtctgctatggagatggaaacttagtgttcattgctaatgattggcatactgctttattgccagtatatctgaaagcttattatcgtgacaatggaattatgaactatacaagatctgtcctggtgattcataacatcgctcatcanggtcgtggtcctttggaggatttttcatatgtagatcttccccacactatatggacccttttcaattgtatgaccccagtagaggtgagcatttcaacatttttgcggctggtct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="+" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="16988" stop="21323"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17288" g_stop="17404" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="117" r_length="117" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="17405" i_stop="18075" i_length="671">
            <donor d_prob="0.908" d_score="1.00"/>
            <acceptor a_prob="0.634" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18076" g_stop="18140" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="118" r_stop="182" r_length="65" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="18141" i_stop="18541" i_length="401">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.761" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="18542" g_stop="18619" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="183" r_stop="260" r_length="78" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="18620" i_stop="18722" i_length="103">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.855" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="18723" g_stop="18833" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="261" r_stop="371" r_length="111" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="18834" i_stop="19276" i_length="443">
            <donor d_prob="0.913" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="19277" g_stop="19321" g_length="45"/>
          <reference_exon_boundary r_type="cDNA" r_start="372" r_stop="416" r_length="45" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="19322" i_stop="19588" i_length="267">
            <donor d_prob="0.958" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="19589" g_stop="19762" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="417" r_stop="590" r_length="174" r_score="0.994"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="19763" i_stop="20907" i_length="1145">
            <donor d_prob="0.992" d_score="0.98"/>
            <acceptor a_prob="0.993" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="20908" g_stop="21023" g_length="116"/>
          <reference_exon_boundary r_type="cDNA" r_start="591" r_stop="705" r_length="115" r_score="0.948"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="+" ref_id="SGN-E379910" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>706</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E379910" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17288" e_stop="17404"/>
          <exon e_start="18076" e_stop="18140"/>
          <exon e_start="18542" e_stop="18619"/>
          <exon e_start="18723" e_stop="18833"/>
          <exon e_start="19277" e_stop="19321"/>
          <exon e_start="19589" e_stop="19762"/>
          <exon e_start="20908" e_stop="21023"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAACGAAGAGACTGAAGATCTTGTGAATATAGATGAGAAACCTCCTCCATTGGCCGGAACAAATGTTATGAACATTATTTTGGTGGCTTCAGAATGCGCTCCATGGTCTAAAACAGGTATATTTTACACTGGATATGTATCTTCTGTCCAGGGACAAATGCGTAGGAACTGCAAAAGAGTAGGACCAGCATTCAGTACTCCTTCGTCTCTAGATAAACAAGATAATTAATTAGTAGAAGGATTAACATATTATCATACCTATCAAAAGTATTATATGACATTTCCTTAGTAATGTGATAAAAGGCATTTAAGAAAAATGAAAAAATATCACTGATCGTCCAATTGAAATGAAAGGGTGAACATCAAAAGAAAAAGGATCTATTATTATCATACCTATCAAAAGTATTATGTGACATTTTCTTAATAATGTGATAAAAGGCATTTAAGAAAAATGAAAAACCATCACTAATCGTCCAAAGTGAAACGAATAGGTGAATGTCAAAAGAAAAAAGATCTATATTTTATCCTGCCTTTCTTCACTAATGTAGTATTGTTGCCTTCTGAATGGTTGAGGATGGGTGGTGGATTTGTTGGTTTCTCAAACTTTGATTTTGTCTGTTGACTTTTCTGTTATCTTCATTTAAAAACTACTGAGCTCTGTGCACGTATATATAATCATGACTCGTACACATTTTTCGTACTTCGATGTTGCATGAATTTTAGTGTGTTTATGTCTCTCGTTTCATATTAGTGCAAGCATATCTTTTACTTGTGAAGAGTTTTTTAGGTGGGCTTGGAGATGTTGCTGGAGCATTACCGAAAGCTTTGGCTCGACGTGGCCACAGAGTTATGGTAAGTAGTTTAATCCTTCACCTTGTGAATTTCTGGATTCATAAGAAATGATGTATCAAGTAGAATGTAACTCAGAGAGAAATTGTCTATGAAGTCTGTTCTGCGCGAGGTGTTATATTCTCTACCCGTCGTCTTTTTAACCACTGGACTATTTATAGATTCACAAGCTTTCCAAAAGATATGCTGTCTAACCAGATTATCGACACCATATGAACCTCTTGCTAAATCATATCATATAATAATTTTTTTGTGACAATATTTATTTCTTTTTGACACATCAAACAGACAACTTTATACATTGCTTAGTATTTAAGAATTTTGCCTTCTCATTCCAAACACATGGGATGTAAGTTATCTGACGCTGAAGTTTCCTTTTCTCCCCCCATTTCCCTGAAACTTAGGTTGTGGCACCTCGTTATGACAACTATCCTGAACCTCAAGATTCTGGTGTAAGAAAAATTTATAAAGTTCATGGTCAGGTATGGTTAACTGCATCAATTAGATGCAGCTTTTAACTTATGCTTGTGATTTCATGGCCACAAGACTATCCATATCTAAGCATTTAAGTTTTGAACTGTGCAGGATGTAGAAGTGACTTACTTCCAAGCTTTTATTGATGGTGTGGATTTTGTTTTCATTGACAGCCATATGTTTAGACACATTGGGAACAACATTTACGGAGGGAACCGTGTGGTAAATCCCGGCGCTCACTTTTCTTCTGAATTTTTAGTTTCATTTTGATCCTGGAATTTCAAACTCCTTGATTTACATTGAAATCTATTAATGAGTCCTCTGTATAATTGCCTGACATAATGTTTTCCCTTGTCACAAAATCTGGGCCTTATGGGATTGGGATGTCTTAGATGATTTTGTCTTCACTTTTCCTTTCTCTTTCTGGGTGGGGAGTTTAAGAGAGAGAGGTTTAAAATGATTTTCTGTACAAACAAGAAGACTGTGATAACGATCCCTTTGGTGAGCTCTGGTATTGACTTTGAGCTACCTTCTTTGCATTGTACATCATTCATTGATGTATCAGTCTTGAAGCTTTATTTGAATTGTTTATCCCCTTCTCATAAATAGTTTTGGCGGTACCTATCTGGCTGTTTTTAACTTCTTTTTTTCTCTTCCTGTTGCAGGATATTTTAAAGCGCATGGTTTTATTTTGCAAAGCAGCGATTGAGGTATGATTTCTGATGTTTCAGGAACCTTGCACTAATTATTGACCAATTGCTCCCTACACTATCTGTCTACGATACGCCACAGTGGCCAGAAAAAAGACTCTGCAAACCTTAAATCAATCTTTGTAACCAACACTGTAAAATAAACCTAGCCATTCTATTTGGGCATGATTATCCATGTTTACTTCATACCTGCACACCCTGTTGTAACATTTTGCCCACTACTATTGCATTGATTTCAAAATACATTTTACTGATTCACAATTTCAGGTTCCTTGGCATGTTCCATGTGGTGGGGTCTGCTATGGAGATGGAAACTTAGTGTTCATTGCTAATGATTGGCATACTGCTTTATTGCCAGTATATCTGAAAGCTTATTATCGTGACAATGGAATTATGAACTATACAAGATCTGTCCTGGTGATTCATAACATCGCTCATCAGGTCAGTTTCATCAGCAACTAAAGCAGTTTTCTAATCCACCTGTGCATTTTTATTTCCAATAATTTAGCAGTATAGCCATTTTTTAAGTTCCAAAGGTTGGTCGTATATCATGATTTCTATGACTTCTAAGCATAAGATTTAAAATAAATGATTACCTTGATAGGTAAACCGATGGGTGGGGCCCATCATCCACTGAGTTTTGAACTGTGGAGGCCTCGAAAATTTCTCGGTTATCAAAATAATTTAATAACGATGACTAGTTTGATATTATATATCTACTAGGTGTTCGTGGGATAATTATTACTTCCGCGTCACTAAGTTCAATAGCTTAGGTACCCACTGAGAGTACCATATCAGGCTATCAATAAATCTAGTTACAGGTAAAGCATTTTTTATCATGCACAGACCATACTCAGACTTGTTTAGGAGTATTGCCTGATAAGTGAAATTCTTTGAAAAGTTGTTTTCTCATCTCTGTGCGTGAGCCGGTTGAAGAATATGCTTTTTAAGCTTCATACTGGATTATGCTTTGATTTGTAATGATCTACCACAATATGAGATCAACCCCACAAAAAACAAAAGAAAATCTCGAAGAAGTTACCAAAGATATGTCGTACATGAAGTCTTATATTAGCAATGTACAACTCTACCTTTTCCTCATGTGCTAAGGTTAAGCACACTGATGCATTTTGCTTCTACTACTAGTTATCATCTTTTTATTAAATTTTTTCTTGCCTCATTTGATATGTATCTGAATACAACTTTCTTTTTATAATGAATTTTCTTCATGAAAGTTACAAAGAGCGCTGTGGAGTGAGCCAAGATTTTATGCATGTAATGTAAGCAGCAGAGAACTAGAAATACTATGTTCGTCCAATTAAACATGACCTACTTTGACCTGTGCAATTGTTTTCAAATATCTGGTAGATTATAACTTTTAAGTATAATGTGAAGAGTGTAAAATAATAATTTGGAATATAAAACAGTAGAGTAATTGGAGTTATCTCTATCCAAGTTCTGTATTTTGTTAGTATTTTCTGATTTTTGTCATTTATTTTATCTTTTTGTAACGTGAATAAGGGTTATAGCAATCTTAGCCAGCTTTCTATCATTTTCAGCTCTATAATTTGTTCCATCTCATGCAGGGTCGTGGTCCTTTGGAGGATTTTTCATATGTAGATCTTCCACCACACTATATGGACCCTTTCAAATTGTATGA-CCCAGTAGGAGGTGAGCATTTCAACATTTTTGCGGCTGGTCT</genome_strand>
        <mrna_strand>CAAACGAAGAGACTGAAGATCTTGTGAATATAGATGAGAAACCTCCTCCATTGGCCGGAACAAATGTTATGAACATTATTTTGGTGGCTTCAGAATGCGCTCCATGGTCTAAAACAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGGCTTGGAGATGTTGCTGGAGCATTACCGAAAGCTTTGGCTCGACGTGGCCACAGAGTTATG.................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTGGCACCTCGTTATGACAACTATCCTGAACCTCAAGATTCTGGTGTAAGAAAAATTTATAAAGTTCATGGTCAG.......................................................................................................GATGTAGAAGTGACTTACTTCCAAGCTTTTATTGATGGTGTGGATTTTGTTTTCATTGACAGCCATATGTTTAGACACATTGGGAACAACATTTACGGAGGGAACCGTGTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................GATATTTTAAAGCGCATGGTTTTATTTTGCAAAGCAGCGATTGAG...........................................................................................................................................................................................................................................................................GTTCCTTGGCATGTTCCATGTGGTGGGGTCTGCTATGGAGATGGAAACTTAGTGTTCATTGCTAATGATTGGCATACTGCTTTATTGCCAGTATATCTGAAAGCTTATTATCGTGACAATGGAATTATGAACTATACAAGATCTGTCCTGGTGATTCATAACATCGCTCATCAN.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTCGTGGTCCTTTGGAGGATTTTTCATATGTAGATCTTCC-CCACACTATATGGACCCTTTTCAATTGTATGACCCCAGTA-GAGGTGAGCATTTCAACATTTTTGCGGCTGGTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E200074" ref_strand="+" ref_description="SGN-E200074 [cLEC-8-E2]">
      <seq>caaacgaagagactgaagatcttgtgaatatagatgagaaacctcctccattggccggaacaaatgttatgaacattattttggtggcttcagaatgcgctccatggtctaaaacaggtgggcttggagatgttgctggagcattaccgaaagctttggctcgacgtggccacagagttatggttgtggcacctcgttatgacaactatcctgaacctcaagattctggtgtaagaaaaatttataaagttcatggtcaggatgtagaagtgacttacttccaagcttttattgatggtgtggattttgttttcattgacagccatatgtttagacacattgggaacaacatttacggagggaaccgtgtggatattttaaagcgcatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="+" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="16988" stop="19139"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17288" g_stop="17404" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="117" r_length="117" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="17405" i_stop="18075" i_length="671">
            <donor d_prob="0.908" d_score="1.00"/>
            <acceptor a_prob="0.634" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18076" g_stop="18140" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="118" r_stop="182" r_length="65" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="18141" i_stop="18541" i_length="401">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.761" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="18542" g_stop="18619" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="183" r_stop="260" r_length="78" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="18620" i_stop="18722" i_length="103">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.855" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="18723" g_stop="18833" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="261" r_stop="371" r_length="111" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="+" ref_id="SGN-E200074" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>371</cumulative_length_of_scored_exons>
        <coverage percentage="0.954" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E200074" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17288" e_stop="17404"/>
          <exon e_start="18076" e_stop="18140"/>
          <exon e_start="18542" e_stop="18619"/>
          <exon e_start="18723" e_stop="18833"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAACGAAGAGACTGAAGATCTTGTGAATATAGATGAGAAACCTCCTCCATTGGCCGGAACAAATGTTATGAACATTATTTTGGTGGCTTCAGAATGCGCTCCATGGTCTAAAACAGGTATATTTTACACTGGATATGTATCTTCTGTCCAGGGACAAATGCGTAGGAACTGCAAAAGAGTAGGACCAGCATTCAGTACTCCTTCGTCTCTAGATAAACAAGATAATTAATTAGTAGAAGGATTAACATATTATCATACCTATCAAAAGTATTATATGACATTTCCTTAGTAATGTGATAAAAGGCATTTAAGAAAAATGAAAAAATATCACTGATCGTCCAATTGAAATGAAAGGGTGAACATCAAAAGAAAAAGGATCTATTATTATCATACCTATCAAAAGTATTATGTGACATTTTCTTAATAATGTGATAAAAGGCATTTAAGAAAAATGAAAAACCATCACTAATCGTCCAAAGTGAAACGAATAGGTGAATGTCAAAAGAAAAAAGATCTATATTTTATCCTGCCTTTCTTCACTAATGTAGTATTGTTGCCTTCTGAATGGTTGAGGATGGGTGGTGGATTTGTTGGTTTCTCAAACTTTGATTTTGTCTGTTGACTTTTCTGTTATCTTCATTTAAAAACTACTGAGCTCTGTGCACGTATATATAATCATGACTCGTACACATTTTTCGTACTTCGATGTTGCATGAATTTTAGTGTGTTTATGTCTCTCGTTTCATATTAGTGCAAGCATATCTTTTACTTGTGAAGAGTTTTTTAGGTGGGCTTGGAGATGTTGCTGGAGCATTACCGAAAGCTTTGGCTCGACGTGGCCACAGAGTTATGGTAAGTAGTTTAATCCTTCACCTTGTGAATTTCTGGATTCATAAGAAATGATGTATCAAGTAGAATGTAACTCAGAGAGAAATTGTCTATGAAGTCTGTTCTGCGCGAGGTGTTATATTCTCTACCCGTCGTCTTTTTAACCACTGGACTATTTATAGATTCACAAGCTTTCCAAAAGATATGCTGTCTAACCAGATTATCGACACCATATGAACCTCTTGCTAAATCATATCATATAATAATTTTTTTGTGACAATATTTATTTCTTTTTGACACATCAAACAGACAACTTTATACATTGCTTAGTATTTAAGAATTTTGCCTTCTCATTCCAAACACATGGGATGTAAGTTATCTGACGCTGAAGTTTCCTTTTCTCCCCCCATTTCCCTGAAACTTAGGTTGTGGCACCTCGTTATGACAACTATCCTGAACCTCAAGATTCTGGTGTAAGAAAAATTTATAAAGTTCATGGTCAGGTATGGTTAACTGCATCAATTAGATGCAGCTTTTAACTTATGCTTGTGATTTCATGGCCACAAGACTATCCATATCTAAGCATTTAAGTTTTGAACTGTGCAGGATGTAGAAGTGACTTACTTCCAAGCTTTTATTGATGGTGTGGATTTTGTTTTCATTGACAGCCATATGTTTAGACACATTGGGAACAACATTTACGGAGGGAACCGTGTG</genome_strand>
        <mrna_strand>CAAACGAAGAGACTGAAGATCTTGTGAATATAGATGAGAAACCTCCTCCATTGGCCGGAACAAATGTTATGAACATTATTTTGGTGGCTTCAGAATGCGCTCCATGGTCTAAAACAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGGCTTGGAGATGTTGCTGGAGCATTACCGAAAGCTTTGGCTCGACGTGGCCACAGAGTTATG.................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTGGCACCTCGTTATGACAACTATCCTGAACCTCAAGATTCTGGTGTAAGAAAAATTTATAAAGTTCATGGTCAG.......................................................................................................GATGTAGAAGTGACTTACTTCCAAGCTTTTATTGATGGTGTGGATTTTGTTTTCATTGACAGCCATATGTTTAGACACATTGGGAACAACATTTACGGAGGGAACCGTGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E406736" ref_strand="+" ref_description="SGN-E406736 [PPI-4-F12]">
      <seq>gtggtggggtctgctatggaaatggaaatttagtgttcattgctaatgattggcatactgctttattgccagtatatctgaaagcttattatcgtgacaatggaattatgaactatacaagatctgtcctggtgattcataacatcgctcatcagggtcgtggtcctttggaggatttttcatatgtagatcttccaccacactatatggaccctttcaagttgtatgacccagtaggaggtgaacatttcaacatttttgcggctggtctaaagacagcagatcgtgtagttacagttagtcatggatattcatgggaactaaagacttcccaggtggttggggattgcatcagataattaatgagaacgattggaaattacggggtattgtgaatgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="+" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="19308" stop="21452"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19608" g_stop="19762" g_length="155"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="155" r_length="155" r_score="0.987"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19763" i_stop="20907" i_length="1145">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20908" g_stop="21152" g_length="245"/>
          <reference_exon_boundary r_type="cDNA" r_start="156" r_stop="399" r_length="244" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="+" ref_id="SGN-E406736" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>400</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E406736" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19608" e_stop="19762"/>
          <exon e_start="20908" e_stop="21152"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGGTGGGGTCTGCTATGGAGATGGAAACTTAGTGTTCATTGCTAATGATTGGCATACTGCTTTATTGCCAGTATATCTGAAAGCTTATTATCGTGACAATGGAATTATGAACTATACAAGATCTGTCCTGGTGATTCATAACATCGCTCATCAGGTCAGTTTCATCAGCAACTAAAGCAGTTTTCTAATCCACCTGTGCATTTTTATTTCCAATAATTTAGCAGTATAGCCATTTTTTAAGTTCCAAAGGTTGGTCGTATATCATGATTTCTATGACTTCTAAGCATAAGATTTAAAATAAATGATTACCTTGATAGGTAAACCGATGGGTGGGGCCCATCATCCACTGAGTTTTGAACTGTGGAGGCCTCGAAAATTTCTCGGTTATCAAAATAATTTAATAACGATGACTAGTTTGATATTATATATCTACTAGGTGTTCGTGGGATAATTATTACTTCCGCGTCACTAAGTTCAATAGCTTAGGTACCCACTGAGAGTACCATATCAGGCTATCAATAAATCTAGTTACAGGTAAAGCATTTTTTATCATGCACAGACCATACTCAGACTTGTTTAGGAGTATTGCCTGATAAGTGAAATTCTTTGAAAAGTTGTTTTCTCATCTCTGTGCGTGAGCCGGTTGAAGAATATGCTTTTTAAGCTTCATACTGGATTATGCTTTGATTTGTAATGATCTACCACAATATGAGATCAACCCCACAAAAAACAAAAGAAAATCTCGAAGAAGTTACCAAAGATATGTCGTACATGAAGTCTTATATTAGCAATGTACAACTCTACCTTTTCCTCATGTGCTAAGGTTAAGCACACTGATGCATTTTGCTTCTACTACTAGTTATCATCTTTTTATTAAATTTTTTCTTGCCTCATTTGATATGTATCTGAATACAACTTTCTTTTTATAATGAATTTTCTTCATGAAAGTTACAAAGAGCGCTGTGGAGTGAGCCAAGATTTTATGCATGTAATGTAAGCAGCAGAGAACTAGAAATACTATGTTCGTCCAATTAAACATGACCTACTTTGACCTGTGCAATTGTTTTCAAATATCTGGTAGATTATAACTTTTAAGTATAATGTGAAGAGTGTAAAATAATAATTTGGAATATAAAACAGTAGAGTAATTGGAGTTATCTCTATCCAAGTTCTGTATTTTGTTAGTATTTTCTGATTTTTGTCATTTATTTTATCTTTTTGTAACGTGAATAAGGGTTATAGCAATCTTAGCCAGCTTTCTATCATTTTCAGCTCTATAATTTGTTCCATCTCATGCAGGGTCGTGGTCCTTTGGAGGATTTTTCATATGTAGATCTTCCACCACACTATATGGACCCTTTCAAATTGTATGACCCAGTAGGAGGTGAGCATTTCAACATTTTTGCGGCTGGTCTAAAGACAGCAGATCGTGTAGTTACAGTTAGTCATGGATATTCATGGGAACTCAAGACTTCCGAAGGTGGTTGGGGATTGCATCAGATAATTAATGAGAACGATTGGAAATTACGGGGTATTGTGAATGG</genome_strand>
        <mrna_strand>GTGGTGGGGTCTGCTATGGAAATGGAAATTTAGTGTTCATTGCTAATGATTGGCATACTGCTTTATTGCCAGTATATCTGAAAGCTTATTATCGTGACAATGGAATTATGAACTATACAAGATCTGTCCTGGTGATTCATAACATCGCTCATCAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTCGTGGTCCTTTGGAGGATTTTTCATATGTAGATCTTCCACCACACTATATGGACCCTTTCAAGTTGTATGACCCAGTAGGAGGTGAACATTTCAACATTTTTGCGGCTGGTCTAAAGACAGCAGATCGTGTAGTTACAGTTAGTCATGGATATTCATGGGAACTAAAGACTTCC-CAGGTGGTTGGGGATTGCATCAGATAATTAATGAGAACGATTGGAAATTACGGGGTATTGTGAATGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E624661" ref_strand="+" ref_description="SGN-E624661 [GI|1200155]">
      <seq>tcatcagggtcgtggtcctttggaggatttttcatatgtagatcttccaccacactatatggaccctttcaagttgtatgacccagtaggaggtgagcatttcaacatttttgcggctggtctaaagacagcagatcgtgtagttacagttagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="+" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="20600" stop="21354"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20900" g_stop="21054" g_length="155"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="154" r_length="154" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="+" ref_id="SGN-E624661" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>155</cumulative_length_of_scored_exons>
        <coverage percentage="1.006" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E624661" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20900" e_stop="21054"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCATGCAGGGTCGTGGTCCTTTGGAGGATTTTTCATATGTAGATCTTCCACCACACTATATGGACCCTTTCAAATTGTATGACCCAGTAGGAGGTGAGCATTTCAACATTTTTGCGGCTGGTCTAAAGACAGCAGATCGTGTAGTTACAGTTAGT</genome_strand>
        <mrna_strand>TCAT-CAGGGTCGTGGTCCTTTGGAGGATTTTTCATATGTAGATCTTCCACCACACTATATGGACCCTTTCAAGTTGTATGACCCAGTAGGAGGTGAGCATTTCAACATTTTTGCGGCTGGTCTAAAGACAGCAGATCGTGTAGTTACAGTTAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E564795" ref_strand="+" ref_description="SGN-E564795 [3044]">
      <seq>acatcgctcatcagggtcgtggtcctttggaggattttcatatgtagatcttccaccacactatatggaccctttcaagttgtatgaccaagtaggaggtgagcatttcaacatttttgcggctggtctaaagacagcagatcgtgtagttacagttagtcatggatattcatgggaactaaagacttcccaaggtggttggggattgcatcagataattaatgagaacgattggaaattacagggtattgtgaatgggattgatacaaaagagtggaaccctgagttggacgttcacttacagtcagatggttacatgaactactccttggacacgctacagactggcaagcctcaatgtaaagctgcattgcagaaggaacttggtttaccagttcgtgatgatgtcccactgatcggtttcattgggaggcttgacccacaaaagggtgttgatctgattgctgaggcagtgcctttggatgatgggtcaggatgtacaaactggtcatgttggggacggggaggcgtgaccttgaacagatgctaaggcaatttgaagtgtcaacacaatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="+" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="20599" stop="21766"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20908" g_stop="21466" g_length="559"/>
          <reference_exon_boundary r_type="cDNA" r_start="15" r_stop="575" r_length="561" r_score="0.968"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="+" ref_id="SGN-E564795" ref_strand="+">
        <total_alignment_score>0.968</total_alignment_score>
        <cumulative_length_of_scored_exons>559</cumulative_length_of_scored_exons>
        <coverage percentage="0.972" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E564795" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20908" e_stop="21466"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTCGTGGTCCTTTGGAGGATTTTTCATATGTAGATCTTCCACCACACTATATGGACCCTTTCAAATTGTATGACCCAGTAGGAGGTGAGCATTTCAACATTTTTGCGGCTGGTCTAAAGACAGCAGATCGTGTAGTTACAGTTAGTCATGGATATTCATGGGAACTCAAGACTTCCGAAGGTGGTTGGGGATTGCATCAGATAATTAATGAGAACGATTGGAAATTACGGGGTATTGTGAATGGGATTGATACAAAAGAGTGGAACCCTGAGTTGGACGTTCACTTACAGTCAGATGGTTACGTGAACTACTCCTTGGACACACTGCAGACTGGCAAGCCTCAATGTAAAGCTGCATTGCAGAAGGAACTTGGTTTACCAGTTCGTGATGATGTCCCACTGATTGGTTTCATTGGGAGGCTTGACCCACAAAAGGGTGTTGATCTGATTGCTGAGGCAGTGCC-TTGGATGATGGGTCAGGATGTAC-AACTGGTCATGTTGGGTACGGGGAGGCCTGACCTTGAACAGATGCTAAGGCAATTTG-AGTGTCAACACAATG</genome_strand>
        <mrna_strand>GGTCGTGGTCCTTTGGAGGA-TTTTCATATGTAGATCTTCCACCACACTATATGGACCCTTTCAAGTTGTATGACCAAGTAGGAGGTGAGCATTTCAACATTTTTGCGGCTGGTCTAAAGACAGCAGATCGTGTAGTTACAGTTAGTCATGGATATTCATGGGAACTAAAGACTTCCCAAGGTGGTTGGGGATTGCATCAGATAATTAATGAGAACGATTGGAAATTACAGGGTATTGTGAATGGGATTGATACAAAAGAGTGGAACCCTGAGTTGGACGTTCACTTACAGTCAGATGGTTACATGAACTACTCCTTGGACACGCTACAGACTGGCAAGCCTCAATGTAAAGCTGCATTGCAGAAGGAACTTGGTTTACCAGTTCGTGATGATGTCCCACTGATCGGTTTCATTGGGAGGCTTGACCCACAAAAGGGTGTTGATCTGATTGCTGAGGCAGTGCCTTTGGATGATGGGTCAGGATGTACAAACTGGTCATGTTGGGGACGGGGAGGCGTGACCTTGAACAGATGCTAAGGCAATTTGAAGTGTCAACACAATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E318941" ref_strand="+" ref_description="SGN-E318941 [cTOB-11-L6]">
      <seq>ttagtcatggatattcatgggaactcaagacttccgaagagtggttggggattgcatcagataattaatgagaaccgattggaaattaccggggtattgtgaatgggattgataccaaaagagtggaacccctgagttggaccgttcaccttacagtcagatggttaccgtgaacctactccttggaccaccacctgcagacctggcaagcctcaatgtaaagctgcattgcagaaggaaccttggtttacccagttcgtgatgatgtcccacctgattggtttcattgggaggcttgaccccacaaaagggtgttgatctgattgctgaggcagtgccttggatgatgggtcaagatgtaccaactggtcatgttgggtccggggaggcctgaccttgaaccagatgcctaaggcaatttgagtgtcaacacaatgataaaattagaggatgggttggtttctctgtgaagacttctcatcgtataactgctggtgccagacattctgctca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="+" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="20750" stop="21841"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="21050" g_stop="21541" g_length="492"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="513" r_length="513" r_score="0.911"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="+" ref_id="SGN-E318941" ref_strand="+">
        <total_alignment_score>0.911</total_alignment_score>
        <cumulative_length_of_scored_exons>492</cumulative_length_of_scored_exons>
        <coverage percentage="0.959" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E318941" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="21050" e_stop="21541"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTAGTCATGGATATTCATGGGAACTCAAGACTTCCGAAG-GTGGTTGGGGATTGCATCAGATAATTAATGAGAAC-GATTGGAAATTA-CGGGGTATTGTGAATGGGATTGATA-CAAAAGAGTGGAA-CCCTGAGTTGGA-CGTTCA-CTTACAGTCAGATGGTTA-CGTGAA-CTACTCCTTGGA-CA-CA-CTGCAGA-CTGGCAAGCCTCAATGTAAAGCTGCATTGCAGAAGGAA-CTTGGTTTA-CCAGTTCGTGATGATGTCCCA-CTGATTGGTTTCATTGGGAGGCTTGA-CCCACAAAAGGGTGTTGATCTGATTGCTGAGGCAGTGCCTTGGATGATGGGTCAGGATGTA-CAACTGGTCATGTTGGGTACGGGGAGGCCTGACCTTGAA-CAGATG-CTAAGGCAATTTGAGTGTCAACACAATGATAAAATTAGAGGATGGGTTGGTTTCTCTGTGAAGACTTCTCATCGTATAACTGCTGGTG-CAGACATTCTGCTCA</genome_strand>
        <mrna_strand>TTAGTCATGGATATTCATGGGAACTCAAGACTTCCGAAGAGTGGTTGGGGATTGCATCAGATAATTAATGAGAACCGATTGGAAATTACCGGGGTATTGTGAATGGGATTGATACCAAAAGAGTGGAACCCCTGAGTTGGACCGTTCACCTTACAGTCAGATGGTTACCGTGAACCTACTCCTTGGACCACCACCTGCAGACCTGGCAAGCCTCAATGTAAAGCTGCATTGCAGAAGGAACCTTGGTTTACCCAGTTCGTGATGATGTCCCACCTGATTGGTTTCATTGGGAGGCTTGACCCCACAAAAGGGTGTTGATCTGATTGCTGAGGCAGTGCCTTGGATGATGGGTCAAGATGTACCAACTGGTCATGTTGGGTCCGGGGAGGCCTGACCTTGAACCAGATGCCTAAGGCAATTTGAGTGTCAACACAATGATAAAATTAGAGGATGGGTTGGTTTCTCTGTGAAGACTTCTCATCGTATAACTGCTGGTGCCAGACATTCTGCTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E589586" ref_strand="+" ref_description="SGN-E589586 [43164]">
      <seq>tggacgttcacttacagtcagatggttacatgaactactccttggacacgctacagactggcaagcctcaatgtaaagctgcattgcagaaggaacttggtttaccagttcgtgatgatgtcccactgatcggtttcattgggaggcttgacccacaaaagggtgttgatctgattgctgaggcagtgccttggatgatgggtcaggatgtacaactggtcatgttggggacggggaggcgtgaccttgaacagatgctaaggcaatttgagtgtcaacacaatgataaaattagaggatgggttggtttctctgtgaagacttctcatcgtataactgctggtgcagacattctgctcatgccttctagatttgagccttgcggactgaaccagctttatgcaatgaaatatgggactattcctgttgttcatgcagtaggaggactcagagatactgtgcagccctttgatccttttaatgagtcaggactggggtggaccttcagtagggctgaagctagccagctgatccacgcattaggaaattgcttactgacttatcgtgagtacaaaaagagttgggaggggattcagacacgttgtatgacacaagacttaagttgggataatgctgctcagaactatgaagaagttctcatcgctgctaagtatcagtgggtgaggttcattacttgtagatatttggggattttggccattgtatcaagttctaatgatgggatttcagagacatgtttctggtatcgacacg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="+" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="20882" stop="22245"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="21182" g_stop="21895" g_length="714"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="715" r_length="715" r_score="0.979"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="+" ref_id="SGN-E589586" ref_strand="+">
        <total_alignment_score>0.979</total_alignment_score>
        <cumulative_length_of_scored_exons>714</cumulative_length_of_scored_exons>
        <coverage percentage="0.922" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E589586" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="21182" e_stop="21895"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGACGTTCACTTACAGTCAGATGGTTACGTGAACTACTCCTTGGACACACTGCAGACTGGCAAGCCTCAATGTAAAGCTGCATTGCAGAAGGAACTTGGTTTACCAGTTCGTGATGATGTCCCACTGATTGGTTTCATTGGGAGGCTTGACCCACAAAAGGGTGTTGATCTGATTGCTGAGGCAGTGCCTTGGATGATGGGTCAGGATGTACAACTGGTCATGTTGGGTACGGGGAGGCCTGACCTTGAACAGATGCTAAGGCAATTTGAGTGTCAACACAATGATAAAATTAGAGGATGGGTTGGTTTCTCTGTGAAGACTTCTCATCGTATAACTGCTGGTGCAGACATTCTGCTCATGCCTTCTAGATTTGAGCCTTGTGGACTGAACCAGCTTTATGCAATGACATATGGGACTATTCCTGTTGTTCATGCAGTAGGAGGACTCAGAGATACTGTGCAGCCCTTTGATCCTTTTAATGAGTCAGGACTGGGGTGGACCTTCAGTAGGGCTGAAGCTAACCAGCTGATCCACGCATTAGGAAATTGCTTGCTGACTTATCGTGAGTACAAAAAGAGTTGGGAGGGGATTCAGACGCGTTGTATGACACAAGACTTAAGTTGGGATAATGCTGCTCAGAACTATGAAGAAGTTCTCATTGCTGCTAAGTATCAGT-GGTGAGGTTCATTACTTGTAGATATTTGGGGGTTTT</genome_strand>
        <mrna_strand>TGGACGTTCACTTACAGTCAGATGGTTACATGAACTACTCCTTGGACACGCTACAGACTGGCAAGCCTCAATGTAAAGCTGCATTGCAGAAGGAACTTGGTTTACCAGTTCGTGATGATGTCCCACTGATCGGTTTCATTGGGAGGCTTGACCCACAAAAGGGTGTTGATCTGATTGCTGAGGCAGTGCCTTGGATGATGGGTCAGGATGTACAACTGGTCATGTTGGGGACGGGGAGGCGTGACCTTGAACAGATGCTAAGGCAATTTGAGTGTCAACACAATGATAAAATTAGAGGATGGGTTGGTTTCTCTGTGAAGACTTCTCATCGTATAACTGCTGGTGCAGACATTCTGCTCATGCCTTCTAGATTTGAGCCTTGCGGACTGAACCAGCTTTATGCAATGAAATATGGGACTATTCCTGTTGTTCATGCAGTAGGAGGACTCAGAGATACTGTGCAGCCCTTTGATCCTTTTAATGAGTCAGGACTGGGGTGGACCTTCAGTAGGGCTGAAGCTAGCCAGCTGATCCACGCATTAGGAAATTGCTTACTGACTTATCGTGAGTACAAAAAGAGTTGGGAGGGGATTCAGACACGTTGTATGACACAAGACTTAAGTTGGGATAATGCTGCTCAGAACTATGAAGAAGTTCTCATCGCTGCTAAGTATCAGTGGGTGAGGTTCATTACTTGTAGATATTTGGGGATTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E333060" ref_strand="+" ref_description="SGN-E333060 [cTOD-19-O9]">
      <seq>aactactccttggacacactgcagactggcaagcctcaatgtaaagctgcattgcagaaggaacttggtttaccagttcgtgatgatgtcccactgattggtttcattgggaggcttgacccacaaaagggtgttgatctgattgctgaggcagtgccttggatgatgggtcaggatgtacaactggtcatgttgggtacggggaggcctgaccttgaacagatgctaaggcaatttgagtgtcaacacaatgataaaattagaggatgggttggtttctctgtgaagacttctcatcgtataactgctggtgcagacattctgctcatgccttctagatttgagccttgtggactgaaccagctttatgcaatgacatatgggactattcctgttgttcatgcagtaggaggactcagagatactgtgcagccctttgatccttttaatgagtcaggactggggtggaccttcagtagggctgaagctaaccagctgatccacgcattaggaaattgcttgctgacttatcgtgagtacaaaaagagttgggaggggattcagacgcgttgtatgacacaagacttaagttgggataatgctgctcagaactatgaagaagttctcattgctgctaagtatcagtggtgaggttcattacttgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="+" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="20914" stop="22178"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="21214" g_stop="21878" g_length="665"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="665" r_length="665" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="+" ref_id="SGN-E333060" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>665</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E333060" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="21214" e_stop="21878"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACTACTCCTTGGACACACTGCAGACTGGCAAGCCTCAATGTAAAGCTGCATTGCAGAAGGAACTTGGTTTACCAGTTCGTGATGATGTCCCACTGATTGGTTTCATTGGGAGGCTTGACCCACAAAAGGGTGTTGATCTGATTGCTGAGGCAGTGCCTTGGATGATGGGTCAGGATGTACAACTGGTCATGTTGGGTACGGGGAGGCCTGACCTTGAACAGATGCTAAGGCAATTTGAGTGTCAACACAATGATAAAATTAGAGGATGGGTTGGTTTCTCTGTGAAGACTTCTCATCGTATAACTGCTGGTGCAGACATTCTGCTCATGCCTTCTAGATTTGAGCCTTGTGGACTGAACCAGCTTTATGCAATGACATATGGGACTATTCCTGTTGTTCATGCAGTAGGAGGACTCAGAGATACTGTGCAGCCCTTTGATCCTTTTAATGAGTCAGGACTGGGGTGGACCTTCAGTAGGGCTGAAGCTAACCAGCTGATCCACGCATTAGGAAATTGCTTGCTGACTTATCGTGAGTACAAAAAGAGTTGGGAGGGGATTCAGACGCGTTGTATGACACAAGACTTAAGTTGGGATAATGCTGCTCAGAACTATGAAGAAGTTCTCATTGCTGCTAAGTATCAGTGGTGAGGTTCATTACTTGT</genome_strand>
        <mrna_strand>AACTACTCCTTGGACACACTGCAGACTGGCAAGCCTCAATGTAAAGCTGCATTGCAGAAGGAACTTGGTTTACCAGTTCGTGATGATGTCCCACTGATTGGTTTCATTGGGAGGCTTGACCCACAAAAGGGTGTTGATCTGATTGCTGAGGCAGTGCCTTGGATGATGGGTCAGGATGTACAACTGGTCATGTTGGGTACGGGGAGGCCTGACCTTGAACAGATGCTAAGGCAATTTGAGTGTCAACACAATGATAAAATTAGAGGATGGGTTGGTTTCTCTGTGAAGACTTCTCATCGTATAACTGCTGGTGCAGACATTCTGCTCATGCCTTCTAGATTTGAGCCTTGTGGACTGAACCAGCTTTATGCAATGACATATGGGACTATTCCTGTTGTTCATGCAGTAGGAGGACTCAGAGATACTGTGCAGCCCTTTGATCCTTTTAATGAGTCAGGACTGGGGTGGACCTTCAGTAGGGCTGAAGCTAACCAGCTGATCCACGCATTAGGAAATTGCTTGCTGACTTATCGTGAGTACAAAAAGAGTTGGGAGGGGATTCAGACGCGTTGTATGACACAAGACTTAAGTTGGGATAATGCTGCTCAGAACTATGAAGAAGTTCTCATTGCTGCTAAGTATCAGTGGTGAGGTTCATTACTTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E334644" ref_strand="+" ref_description="SGN-E334644 [cTOD-23-B7]">
      <seq>aactactccttggacacactgcagactggcaagcctcaatgtaaagctgcattgcagaaggaacttggtttaccagttcgtgatgatgtcccactgattggtttcattgggaggcttgacccacaaaagggtgttgatctgattgctgaggcagtgccttggatgatgggtcaggatgtacaactggtcatgttgggtacggggaggcctgaccttgaacagatgctaaggcaatttgagtgtcaacacaatgataaaattagaggatgggttggtttctctgtgaagacttctcatcgtataactgctggtgcagacattctgctcatgccttctagatttgagccttgtggactgaaccagctttatgcaatgacatatgggactattcctgttgttcatgcagtaggaggactcagagatactgtgcagccctttgatccttttaatgagtcaggactggggtggaccttcagtagggctgaagctaaccagctgatccacgcattangaaattgcttgctgacttatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="+" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="20914" stop="22045"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="21214" g_stop="21745" g_length="532"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="532" r_length="532" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="+" ref_id="SGN-E334644" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>532</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E334644" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="21214" e_stop="21745"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACTACTCCTTGGACACACTGCAGACTGGCAAGCCTCAATGTAAAGCTGCATTGCAGAAGGAACTTGGTTTACCAGTTCGTGATGATGTCCCACTGATTGGTTTCATTGGGAGGCTTGACCCACAAAAGGGTGTTGATCTGATTGCTGAGGCAGTGCCTTGGATGATGGGTCAGGATGTACAACTGGTCATGTTGGGTACGGGGAGGCCTGACCTTGAACAGATGCTAAGGCAATTTGAGTGTCAACACAATGATAAAATTAGAGGATGGGTTGGTTTCTCTGTGAAGACTTCTCATCGTATAACTGCTGGTGCAGACATTCTGCTCATGCCTTCTAGATTTGAGCCTTGTGGACTGAACCAGCTTTATGCAATGACATATGGGACTATTCCTGTTGTTCATGCAGTAGGAGGACTCAGAGATACTGTGCAGCCCTTTGATCCTTTTAATGAGTCAGGACTGGGGTGGACCTTCAGTAGGGCTGAAGCTAACCAGCTGATCCACGCATTAGGAAATTGCTTGCTGACTTATC</genome_strand>
        <mrna_strand>AACTACTCCTTGGACACACTGCAGACTGGCAAGCCTCAATGTAAAGCTGCATTGCAGAAGGAACTTGGTTTACCAGTTCGTGATGATGTCCCACTGATTGGTTTCATTGGGAGGCTTGACCCACAAAAGGGTGTTGATCTGATTGCTGAGGCAGTGCCTTGGATGATGGGTCAGGATGTACAACTGGTCATGTTGGGTACGGGGAGGCCTGACCTTGAACAGATGCTAAGGCAATTTGAGTGTCAACACAATGATAAAATTAGAGGATGGGTTGGTTTCTCTGTGAAGACTTCTCATCGTATAACTGCTGGTGCAGACATTCTGCTCATGCCTTCTAGATTTGAGCCTTGTGGACTGAACCAGCTTTATGCAATGACATATGGGACTATTCCTGTTGTTCATGCAGTAGGAGGACTCAGAGATACTGTGCAGCCCTTTGATCCTTTTAATGAGTCAGGACTGGGGTGGACCTTCAGTAGGGCTGAAGCTAACCAGCTGATCCACGCATTANGAAATTGCTTGCTGACTTATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E333394" ref_strand="+" ref_description="SGN-E333394 [cTOD-20-D1]">
      <seq>aactactccttggacacactgcagactggcaagcctcaatgtaaagctgcattgcagaaggaacttggtttaccagttcgtgatgatgtcccactgattggtttcattgggaggcttgacccacaaaagggtgttgatctgattgctgaggcagtgccttggatgatgggtcaggatgtacaactggtcatgttgggtacggggaggcctgaccttgaacagatgctaaggcaatttgagtgtcaacacaatgataaaattagaggatgggttggtttctctgtgaagacttctcatcgtataactgctggtgcagacattctgctcatgccttctagatttgagccttgtggactgaaccagctttatgcaatgacatatgggactattcctgttgttcatgcagtangaggactcagagatactgtgcagccctttgatcctttttatgagtcaggactggggtggaccttccagtaggctgaagctaaccagctgatccacgcattaggaaattgcttgctga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="+" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="20914" stop="22039"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="21214" g_stop="21739" g_length="526"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="526" r_length="526" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="+" ref_id="SGN-E333394" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>526</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E333394" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="21214" e_stop="21739"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACTACTCCTTGGACACACTGCAGACTGGCAAGCCTCAATGTAAAGCTGCATTGCAGAAGGAACTTGGTTTACCAGTTCGTGATGATGTCCCACTGATTGGTTTCATTGGGAGGCTTGACCCACAAAAGGGTGTTGATCTGATTGCTGAGGCAGTGCCTTGGATGATGGGTCAGGATGTACAACTGGTCATGTTGGGTACGGGGAGGCCTGACCTTGAACAGATGCTAAGGCAATTTGAGTGTCAACACAATGATAAAATTAGAGGATGGGTTGGTTTCTCTGTGAAGACTTCTCATCGTATAACTGCTGGTGCAGACATTCTGCTCATGCCTTCTAGATTTGAGCCTTGTGGACTGAACCAGCTTTATGCAATGACATATGGGACTATTCCTGTTGTTCATGCAGTAGGAGGACTCAGAGATACTGTGCAGCCCTTTGATCCTTTTAATGAGTCAGGACTGGGGTGGACCTT-CAGTAGGGCTGAAGCTAACCAGCTGATCCACGCATTAGGAAATTGCTTGCTGA</genome_strand>
        <mrna_strand>AACTACTCCTTGGACACACTGCAGACTGGCAAGCCTCAATGTAAAGCTGCATTGCAGAAGGAACTTGGTTTACCAGTTCGTGATGATGTCCCACTGATTGGTTTCATTGGGAGGCTTGACCCACAAAAGGGTGTTGATCTGATTGCTGAGGCAGTGCCTTGGATGATGGGTCAGGATGTACAACTGGTCATGTTGGGTACGGGGAGGCCTGACCTTGAACAGATGCTAAGGCAATTTGAGTGTCAACACAATGATAAAATTAGAGGATGGGTTGGTTTCTCTGTGAAGACTTCTCATCGTATAACTGCTGGTGCAGACATTCTGCTCATGCCTTCTAGATTTGAGCCTTGTGGACTGAACCAGCTTTATGCAATGACATATGGGACTATTCCTGTTGTTCATGCAGTANGAGGACTCAGAGATACTGTGCAGCCCTTTGATCCTTTTTATGAGTCAGGACTGGGGTGGACCTTCCAGTA-GGCTGAAGCTAACCAGCTGATCCACGCATTAGGAAATTGCTTGCTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E328810" ref_strand="+" ref_description="SGN-E328810 [cTOC-24-A5]">
      <seq>attgctgaggcagtgccttggatgatgggtcaggatgtacaactggtcatgttgggtacggggaggcctgaccttgaacagatgctaaggcaatttgagtgtcaacacaatgataaaattagaggatgggttggtttctctgtgaagacttctcatcgtataactgctggtgcagacattctgctcatgccttctagatttgagccttgtggactgaaccagctttatgcaatgacatatgggactattcctgttgttcatgcagtaggaggactcagagatactgtgcagccctttgatccttttaatgagtcaggactggggtggaccttcagtagggctgaagctaaccagctgatccacgcattaggaaattgcttgctgacttatcgtgagtacaaaaagagttgggaggggattcagacgcgttgtatgacacaagacttaagttgggataatgctgctcagaactatgaagaagttctcattgctgctaagtatcagtggtgaggttcattacttgtagatatttgggggttttatcaagttccaatgatggcatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="+" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="21055" stop="22217"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="21355" g_stop="21917" g_length="563"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="563" r_length="563" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="+" ref_id="SGN-E328810" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>563</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E328810" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="21355" e_stop="21917"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTGCTGAGGCAGTGCCTTGGATGATGGGTCAGGATGTACAACTGGTCATGTTGGGTACGGGGAGGCCTGACCTTGAACAGATGCTAAGGCAATTTGAGTGTCAACACAATGATAAAATTAGAGGATGGGTTGGTTTCTCTGTGAAGACTTCTCATCGTATAACTGCTGGTGCAGACATTCTGCTCATGCCTTCTAGATTTGAGCCTTGTGGACTGAACCAGCTTTATGCAATGACATATGGGACTATTCCTGTTGTTCATGCAGTAGGAGGACTCAGAGATACTGTGCAGCCCTTTGATCCTTTTAATGAGTCAGGACTGGGGTGGACCTTCAGTAGGGCTGAAGCTAACCAGCTGATCCACGCATTAGGAAATTGCTTGCTGACTTATCGTGAGTACAAAAAGAGTTGGGAGGGGATTCAGACGCGTTGTATGACACAAGACTTAAGTTGGGATAATGCTGCTCAGAACTATGAAGAAGTTCTCATTGCTGCTAAGTATCAGTGGTGAGGTTCATTACTTGTAGATATTTGGGGGTTTTATCAAGTTCCAATGATGGCATT</genome_strand>
        <mrna_strand>ATTGCTGAGGCAGTGCCTTGGATGATGGGTCAGGATGTACAACTGGTCATGTTGGGTACGGGGAGGCCTGACCTTGAACAGATGCTAAGGCAATTTGAGTGTCAACACAATGATAAAATTAGAGGATGGGTTGGTTTCTCTGTGAAGACTTCTCATCGTATAACTGCTGGTGCAGACATTCTGCTCATGCCTTCTAGATTTGAGCCTTGTGGACTGAACCAGCTTTATGCAATGACATATGGGACTATTCCTGTTGTTCATGCAGTAGGAGGACTCAGAGATACTGTGCAGCCCTTTGATCCTTTTAATGAGTCAGGACTGGGGTGGACCTTCAGTAGGGCTGAAGCTAACCAGCTGATCCACGCATTAGGAAATTGCTTGCTGACTTATCGTGAGTACAAAAAGAGTTGGGAGGGGATTCAGACGCGTTGTATGACACAAGACTTAAGTTGGGATAATGCTGCTCAGAACTATGAAGAAGTTCTCATTGCTGCTAAGTATCAGTGGTGAGGTTCATTACTTGTAGATATTTGGGGGTTTTATCAAGTTCCAATGATGGCATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E379790" ref_strand="+" ref_description="SGN-E379790 [TUS-1-M12](-)">
      <seq>accttgaacagatgctaaggcaatttgagtgtcaacacaatgataaaattagaggatgggttggtttctctgtgaagacttctcatcgtataactgctggtgcagacattctgctcatgccttctagattgagcccttgtggactgaaccagctttatgcaatgacatatgggactattcctgttgttcatgcagtaggaggactcagagatactgtgcagccctttgatccttttaatgagtcaggactggggtggaccttcagtagggctgaagctaaccagctgatccacgcattaggaaattgcttgctgacttatcgtgagtacaaaaagagttgggaggggattcagacgcgttgtatgacacaagacttaagttgggataatgctgctcagaactatgaagaagttctcattgctgctaagtatcagtggtgaggttcattacttgtagatatttgggggttttatcaagttccaatgatggcatttcagagacatgttactggtatcgccacgagaggatgcaacaagttggttaactatcatactactaccacgtcaggaatgattgccgcgcttgatcatataatcatgtatatactctattttgttagcaaaatgtagttacatgttgcaatttctactctatattttttggaagttttagttgtcagataatcagccacctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="+" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="21125" stop="22418"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="21425" g_stop="22118" g_length="694"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="694" r_length="694" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="+" ref_id="SGN-E379790" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>694</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E379790" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="21425" e_stop="22118"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACCTTGAACAGATGCTAAGGCAATTTGAGTGTCAACACAATGATAAAATTAGAGGATGGGTTGGTTTCTCTGTGAAGACTTCTCATCGTATAACTGCTGGTGCAGACATTCTGCTCATGCCTTCTAGATTTGAG-CCTTGTGGACTGAACCAGCTTTATGCAATGACATATGGGACTATTCCTGTTGTTCATGCAGTAGGAGGACTCAGAGATACTGTGCAGCCCTTTGATCCTTTTAATGAGTCAGGACTGGGGTGGACCTTCAGTAGGGCTGAAGCTAACCAGCTGATCCACGCATTAGGAAATTGCTTGCTGACTTATCGTGAGTACAAAAAGAGTTGGGAGGGGATTCAGACGCGTTGTATGACACAAGACTTAAGTTGGGATAATGCTGCTCAGAACTATGAAGAAGTTCTCATTGCTGCTAAGTATCAGTGGTGAGGTTCATTACTTGTAGATATTTGGGGGTTTTATCAAGTTCCAATGATGGCATTTCAGAGACATGTTACTGGTATCGCCACGAGAGGATGCAACAAGTTGGTTAACTATCATACTACTACCACGTCAGGAATGATTGCCGCGCTTGATCATATAATCATGTATATACTCTATTTTGTTAGCAAAATGTAGTTACATGTTGCAATTTCTACTCTATATTTTTTGGAAGTTTTAGTTGTCAAATAATCAGCCACCTC</genome_strand>
        <mrna_strand>ACCTTGAACAGATGCTAAGGCAATTTGAGTGTCAACACAATGATAAAATTAGAGGATGGGTTGGTTTCTCTGTGAAGACTTCTCATCGTATAACTGCTGGTGCAGACATTCTGCTCATGCCTTCTAGA-TTGAGCCCTTGTGGACTGAACCAGCTTTATGCAATGACATATGGGACTATTCCTGTTGTTCATGCAGTAGGAGGACTCAGAGATACTGTGCAGCCCTTTGATCCTTTTAATGAGTCAGGACTGGGGTGGACCTTCAGTAGGGCTGAAGCTAACCAGCTGATCCACGCATTAGGAAATTGCTTGCTGACTTATCGTGAGTACAAAAAGAGTTGGGAGGGGATTCAGACGCGTTGTATGACACAAGACTTAAGTTGGGATAATGCTGCTCAGAACTATGAAGAAGTTCTCATTGCTGCTAAGTATCAGTGGTGAGGTTCATTACTTGTAGATATTTGGGGGTTTTATCAAGTTCCAATGATGGCATTTCAGAGACATGTTACTGGTATCGCCACGAGAGGATGCAACAAGTTGGTTAACTATCATACTACTACCACGTCAGGAATGATTGCCGCGCTTGATCATATAATCATGTATATACTCTATTTTGTTAGCAAAATGTAGTTACATGTTGCAATTTCTACTCTATATTTTTTGGAAGTTTTAGTTGTCAGATAATCAGCCACCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E589890" ref_strand="+" ref_description="SGN-E589890 [43474]">
      <seq>gttggtttctctgtgaagacttctcatcgtataactgctggtgcagacattctgctcatgccttctagatttgagccttgcggactgaaccagctttatgcaatgaaatatgggactattcctgttgttcatgcagtaggaggactcagagatactgtgcagccctttgatccttttaatgagtcaggactggggtggaccttcagtagggctgaagctagccagctgatccacgcattaggaaattgcttactgacttatcgtgagtacaaaaagagttgggaggggattcagacacgttgtatgacacaagacttaagttgggataatgctgctcagaactatgaagaagttctcatcgctgctaagtatcagtgggtgaggttcattacttgtagatatttggggattttggccattgtatcaagttctaatgatgggatttcagagacatgtttctggtatcgacacgagaggatgcatgcaacaagttggctaactatcatactactaccacgtcaggaatgattgccgcacttgatcatgtaatcatgtatatactctattttgtttgcaaaatgtagttacatgttgcaatttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="+" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="21184" stop="22370"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="21484" g_stop="22070" g_length="587"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="601" r_length="601" r_score="0.927"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="+" ref_id="SGN-E589890" ref_strand="+">
        <total_alignment_score>0.927</total_alignment_score>
        <cumulative_length_of_scored_exons>587</cumulative_length_of_scored_exons>
        <coverage percentage="0.977" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E589890" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="21484" e_stop="22070"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTGGTTTCTCTGTGAAGACTTCTCATCGTATAACTGCTGGTGCAGACATTCTGCTCATGCCTTCTAGATTTGAGCCTTGTGGACTGAACCAGCTTTATGCAATGACATATGGGACTATTCCTGTTGTTCATGCAGTAGGAGGACTCAGAGATACTGTGCAGCCCTTTGATCCTTTTAATGAGTCAGGACTGGGGTGGACCTTCAGTAGGGCTGAAGCTAACCAGCTGATCCACGCATTAGGAAATTGCTTGCTGACTTATCGTGAGTACAAAAAGAGTTGGGAGGGGATTCAGACGCGTTGTATGACACAAGACTTAAGTTGGGATAATGCTGCTCAGAACTATGAAGAAGTTCTCATTGCTGCTAAGTATCAGT-GGTGAGGTTCATTACTTGTAGATATTT-GGG-----GG---TTTTATCAAGTTCCAATGATGGCATTTCAGAGACATGTTACTGGTATCGCCACGAGA-G--G-ATGCAACAAGTTGGTTAACTATCATACTACTACCACGTCAGGAATGATTGCCGCGCTTGATCATATAATCATGTATATACTCTATTTTGTTAGCAAAATGTAGTTACATGTTGCAATTTC</genome_strand>
        <mrna_strand>GTTGGTTTCTCTGTGAAGACTTCTCATCGTATAACTGCTGGTGCAGACATTCTGCTCATGCCTTCTAGATTTGAGCCTTGCGGACTGAACCAGCTTTATGCAATGAAATATGGGACTATTCCTGTTGTTCATGCAGTAGGAGGACTCAGAGATACTGTGCAGCCCTTTGATCCTTTTAATGAGTCAGGACTGGGGTGGACCTTCAGTAGGGCTGAAGCTAGCCAGCTGATCCACGCATTAGGAAATTGCTTACTGACTTATCGTGAGTACAAAAAGAGTTGGGAGGGGATTCAGACACGTTGTATGACACAAGACTTAAGTTGGGATAATGCTGCTCAGAACTATGAAGAAGTTCTCATCGCTGCTAAGTATCAGTGGGTGAGGTTCATTACTTGTAGATATTTGGGGATTTTGGCCATTGTATCAAGTTCTAATGATGGGATTTCAGAGACATGTTTCTGGTATCGACACGAGAGGATGCATGCAACAAGTTGGCTAACTATCATACTACTACCACGTCAGGAATGATTGCCGCACTTGATCATGTAATCATGTATATACTCTATTTTGTTTGCAAAATGTAGTTACATGTTGCAATTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E419352" ref_strand="-" ref_description="SGN-E419352 [STM-29-O6]">
      <seq>agctttatgcaatgaaatatgggactattcctgttgttcatgcagtaggaggactcagagatactgtgcagccctttgatccttttaatgagtcaggactggggtggaccttcagtagggctgaagctagccagctgatccacgcattaggaaattgcttactgacttatcgtgagtacaaaaagagttgggaggggattcagacacgttgtatgatacaagacttaagttgggataatgctgctcagaactatgaagaagttctcatcgctgctaagtatcagtggtgaggttcattacttgtagatatttggggattttggccattgtatcaagttctaatgatgggatttcagagacatgtttctggtatcgacacgagaggatgcatacaacaagttggctaactatcatactactaccacgtcaggaatgattgccgcacttgatcatataatcatgtatatactctattttgttagcaaaatgaagttacatgttgcaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="+" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="21275" stop="22366"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="21575" g_stop="22065" g_length="491"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="504" r_length="504" r_score="0.919"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="505" polyA_stop="518"/>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="+" ref_id="SGN-E419352" ref_strand="-">
        <total_alignment_score>0.919</total_alignment_score>
        <cumulative_length_of_scored_exons>491</cumulative_length_of_scored_exons>
        <coverage percentage="0.948" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E419352" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="21575" e_stop="22065"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCTTTATGCAATGACATATGGGACTATTCCTGTTGTTCATGCAGTAGGAGGACTCAGAGATACTGTGCAGCCCTTTGATCCTTTTAATGAGTCAGGACTGGGGTGGACCTTCAGTAGGGCTGAAGCTAACCAGCTGATCCACGCATTAGGAAATTGCTTGCTGACTTATCGTGAGTACAAAAAGAGTTGGGAGGGGATTCAGACGCGTTGTATGACACAAGACTTAAGTTGGGATAATGCTGCTCAGAACTATGAAGAAGTTCTCATTGCTGCTAAGTATCAGTGGTGAGGTTCATTACTTGTAGATATTT-GGG-----GG---TTTTATCAAGTTCCAATGATGGCATTTCAGAGACATGTTACTGGTATCGCCACGAGAGGATG----CAACAAGTTGGTTAACTATCATACTACTACCACGTCAGGAATGATTGCCGCGCTTGATCATATAATCATGTATATACTCTATTTTGTTAGCAAAATGTAGTTACATGTTGCA</genome_strand>
        <mrna_strand>AGCTTTATGCAATGAAATATGGGACTATTCCTGTTGTTCATGCAGTAGGAGGACTCAGAGATACTGTGCAGCCCTTTGATCCTTTTAATGAGTCAGGACTGGGGTGGACCTTCAGTAGGGCTGAAGCTAGCCAGCTGATCCACGCATTAGGAAATTGCTTACTGACTTATCGTGAGTACAAAAAGAGTTGGGAGGGGATTCAGACACGTTGTATGATACAAGACTTAAGTTGGGATAATGCTGCTCAGAACTATGAAGAAGTTCTCATCGCTGCTAAGTATCAGTGGTGAGGTTCATTACTTGTAGATATTTGGGGATTTTGGCCATTGTATCAAGTTCTAATGATGGGATTTCAGAGACATGTTTCTGGTATCGACACGAGAGGATGCATACAACAAGTTGGCTAACTATCATACTACTACCACGTCAGGAATGATTGCCGCACTTGATCATATAATCATGTATATACTCTATTTTGTTAGCAAAATGAAGTTACATGTTGCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E242138" ref_strand="+" ref_description="SGN-E242138 [cLED-37-O8]">
      <seq>gactattcctgttgttcatgcagtaggaggactcagagatactgtgcagccctttgatccttttaatgagtcaggactggggtggaccttcagtagggctgaagctaaccagctgatccacgcattaggaaattgcttgctgacttatcgtgagtacaaaaagagttgggaggggattcagacgcgttgtatgacacaagacttaagttgggataatgctgctcagaactatgaagaagttctcattgctgctaagtatcagtggtgaggttcattacttgtagatatttgggggttttatcaagttccaatgatggcatttcagagacatgttact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="+" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="21297" stop="22233"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="21597" g_stop="21933" g_length="337"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="337" r_length="337" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="+" ref_id="SGN-E242138" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>337</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E242138" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="21597" e_stop="21933"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GACTATTCCTGTTGTTCATGCAGTAGGAGGACTCAGAGATACTGTGCAGCCCTTTGATCCTTTTAATGAGTCAGGACTGGGGTGGACCTTCAGTAGGGCTGAAGCTAACCAGCTGATCCACGCATTAGGAAATTGCTTGCTGACTTATCGTGAGTACAAAAAGAGTTGGGAGGGGATTCAGACGCGTTGTATGACACAAGACTTAAGTTGGGATAATGCTGCTCAGAACTATGAAGAAGTTCTCATTGCTGCTAAGTATCAGTGGTGAGGTTCATTACTTGTAGATATTTGGGGGTTTTATCAAGTTCCAATGATGGCATTTCAGAGACATGTTACT</genome_strand>
        <mrna_strand>GACTATTCCTGTTGTTCATGCAGTAGGAGGACTCAGAGATACTGTGCAGCCCTTTGATCCTTTTAATGAGTCAGGACTGGGGTGGACCTTCAGTAGGGCTGAAGCTAACCAGCTGATCCACGCATTAGGAAATTGCTTGCTGACTTATCGTGAGTACAAAAAGAGTTGGGAGGGGATTCAGACGCGTTGTATGACACAAGACTTAAGTTGGGATAATGCTGCTCAGAACTATGAAGAAGTTCTCATTGCTGCTAAGTATCAGTGGTGAGGTTCATTACTTGTAGATATTTGGGGGTTTTATCAAGTTCCAATGATGGCATTTCAGAGACATGTTACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E230032" ref_strand="+" ref_description="SGN-E230032 [cLEL-33-H7](-)">
      <seq>ttaagttgggataatactgctcagaactataaagaagttctcattgctgctaagtatcagtggtgaggttcattacttgtagatatttgggggttttatcaagttccaatgatggcatttcagagacatgttactggtatcgccacgagaggatgcaacaagttggttaactatcatactactaccacgtcaggaatgattgccgcgcttgatcatataatcatgtatatactctattttgttagcaaaatgtagttacatgttgcaatttctactctatattttttggaagttttagttgtcaaataatcagccacctcaatttttgtttagatgtattctctctcaataataaaattgaccgactcatctaaaccacaatcaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="+" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="21499" stop="66089"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="21799" g_stop="22183" g_length="385"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="385" r_length="385" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="22184" i_stop="22955" i_length="772">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.666" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="22956" g_stop="22971" g_length="16"/>
          <reference_exon_boundary r_type="cDNA" r_start="386" r_stop="401" r_length="16" r_score="0.688"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="+" ref_id="SGN-E230032" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>401</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E230032" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="21799" e_stop="22183"/>
          <exon e_start="22956" e_stop="22971"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTAAGTTGGGATAATGCTGCTCAGAACTATGAAGAAGTTCTCATTGCTGCTAAGTATCAGTGGTGAGGTTCATTACTTGTAGATATTTGGGGGTTTTATCAAGTTCCAATGATGGCATTTCAGAGACATGTTACTGGTATCGCCACGAGAGGATGCAACAAGTTGGTTAACTATCATACTACTACCACGTCAGGAATGATTGCCGCGCTTGATCATATAATCATGTATATACTCTATTTTGTTAGCAAAATGTAGTTACATGTTGCAATTTCTACTCTATATTTTTTGGAAGTTTTAGTTGTCAAATAATCAGCCACCTCAATTTTTGTTTAGATGTATTCTCTCTCAATAATAAAATTGACCGACTCATCTAAACCACAATCAATCACTTCTGATGCTTTCCTTCAAGTAAAGCTTTTAGCGGACAATTGTTTCATATTGACAGTTCTCATGAGATCCACTAGCAGTATCCGTATTTATAAGAAGGAAAAAGTCTGATAATGCCATTGTGATTCATATATATTAGTGTTATCTTAAATGACTCATAATATTTTATTTTTTTTCTAATGGAAGTGATTTATTTTTAAAAAATAAATATAATTCATATGAGTACATTTAATCATTTTCGCACATTTTTTGACTTTTTTTTAATCTCTATGACAAATTTAAATTTTATTATTTTGCTAGTTAAATTTATTTATGTTTCATTAATTTTCTTGTAAAATTTATCATAGATGTTTTTTTTCAAATACAAAAAAATAAACTAGAGTAAGCCGAAAAAATAGTTTTAAATTATAATTAGCCACAGAAAAACAGTTTTAAAAATTTCTTCACGAATGAAAGAAAAAAATAAAATATAAATAAACAACTTTAATTATGATAATCAAAGAAGTAAAAAAAATTATGTATGAGAAGGATCTTATACATCACTACATGATTTTTTCTTTTTTAAAAAAATAGAAGTAAAAAGTTTGAAAATTATATCAAACGTTTTTCCCTTACTATAATACTACATACTTTACATCAAACAGGAAAACCTATTTATATATAATTTCTTATTATAAAAATCCTATTTAGACATGAATAAACAACTTCAGCCGTCCCTATTTACTTGTTCAACATTTTTTTTAATTGTCCTTATTTACTTGTCTATTTAGACAAATCAAAAAAGGA</genome_strand>
        <mrna_strand>TTAAGTTGGGATAATACTGCTCAGAACTATAAAGAAGTTCTCATTGCTGCTAAGTATCAGTGGTGAGGTTCATTACTTGTAGATATTTGGGGGTTTTATCAAGTTCCAATGATGGCATTTCAGAGACATGTTACTGGTATCGCCACGAGAGGATGCAACAAGTTGGTTAACTATCATACTACTACCACGTCAGGAATGATTGCCGCGCTTGATCATATAATCATGTATATACTCTATTTTGTTAGCAAAATGTAGTTACATGTTGCAATTTCTACTCTATATTTTTTGGAAGTTTTAGTTGTCAAATAATCAGCCACCTCAATTTTTGTTTAGATGTATTCTCTCTCAATAATAAAATTGACCGACTCATCTAAACCACAATCAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E217624" ref_strand="+" ref_description="SGN-E217624 [cLEL-25-C11](-)">
      <seq>atgctgctcagaactatgaagaagttctcattgctgctaagtatcagtggtgaggttcattacttgtagatatttgggggttttatcaagttccaatgatggcatttcagagacatgttactggtatcgccacaagaggatgcaacaagttggttaactatcatactactaccacgtcaggaatgattgccgcgcttgatcatataatcatgtatatactctattttgttagcaaaatgtagttacatgttgcaatttctactctatattttttggaagttttagttgtcaaataatcagccacctcaatttttgtttaaaaaaaaccccaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="+" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="21512" stop="66088"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="21812" g_stop="22133" g_length="322"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="322" r_length="322" r_score="0.991"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="22134" i_stop="22955" i_length="822">
            <donor d_prob="0.000" d_score="0.96"/>
            <acceptor a_prob="0.666" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="22956" g_stop="22978" g_length="23"/>
          <reference_exon_boundary r_type="cDNA" r_start="323" r_stop="345" r_length="23" r_score="0.652"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="+" ref_id="SGN-E217624" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>345</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E217624" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="21812" e_stop="22133"/>
          <exon e_start="22956" e_stop="22978"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGCTGCTCAGAACTATGAAGAAGTTCTCATTGCTGCTAAGTATCAGTGGTGAGGTTCATTACTTGTAGATATTTGGGGGTTTTATCAAGTTCCAATGATGGCATTTCAGAGACATGTTACTGGTATCGCCACGAGAGGATGCAACAAGTTGGTTAACTATCATACTACTACCACGTCAGGAATGATTGCCGCGCTTGATCATATAATCATGTATATACTCTATTTTGTTAGCAAAATGTAGTTACATGTTGCAATTTCTACTCTATATTTTTTGGAAGTTTTAGTTGTCAAATAATCAGCCACCTCAATTTTTGTTTAGATGTATTCTCTCTCAATAATAAAATTGACCGACTCATCTAAACCACAATCAATCACTTCTGATGCTTTCCTTCAAGTAAAGCTTTTAGCGGACAATTGTTTCATATTGACAGTTCTCATGAGATCCACTAGCAGTATCCGTATTTATAAGAAGGAAAAAGTCTGATAATGCCATTGTGATTCATATATATTAGTGTTATCTTAAATGACTCATAATATTTTATTTTTTTTCTAATGGAAGTGATTTATTTTTAAAAAATAAATATAATTCATATGAGTACATTTAATCATTTTCGCACATTTTTTGACTTTTTTTTAATCTCTATGACAAATTTAAATTTTATTATTTTGCTAGTTAAATTTATTTATGTTTCATTAATTTTCTTGTAAAATTTATCATAGATGTTTTTTTTCAAATACAAAAAAATAAACTAGAGTAAGCCGAAAAAATAGTTTTAAATTATAATTAGCCACAGAAAAACAGTTTTAAAAATTTCTTCACGAATGAAAGAAAAAAATAAAATATAAATAAACAACTTTAATTATGATAATCAAAGAAGTAAAAAAAATTATGTATGAGAAGGATCTTATACATCACTACATGATTTTTTCTTTTTTAAAAAAATAGAAGTAAAAAGTTTGAAAATTATATCAAACGTTTTTCCCTTACTATAATACTACATACTTTACATCAAACAGGAAAACCTATTTATATATAATTTCTTATTATAAAAATCCTATTTAGACATGAATAAACAACTTCAGCCGTCCCTATTTACTTGTTCAACATTTTTTTTAATTGTCCTTATTTACTTGTCTATTTAGACAAATCAAAAAAGGACAAAAAG</genome_strand>
        <mrna_strand>ATGCTGCTCAGAACTATGAAGAAGTTCTCATTGCTGCTAAGTATCAGTGGTGAGGTTCATTACTTGTAGATATTTGGGGGTTTTATCAAGTTCCAATGATGGCATTTCAGAGACATGTTACTGGTATCGCCACAAGAGGATGCAACAAGTTGGTTAACTATCATACTACTACCACGTCAGGAATGATTGCCGCGCTTGATCATATAATCATGTATATACTCTATTTTGTTAGCAAAATGTAGTTACATGTTGCAATTTCTACTCTATATTTTTTGGAAGTTTTAGTTGTCAAATAATCAGCCACCTCAATTTTTGTTTAAAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAACCCCAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E217576" ref_strand="+" ref_description="SGN-E217576 [cLEL-25-C23](-)">
      <seq>ctcagaactatgaagaagttctcattgctgctaagtatcagtggtgaggttcattacttgtagatatttgggggttttatcaagttccaatgatggcatttcagagacatgttactggtatcgccacgagaggatgcaacaagttggttaactatcatactactaccacgtcaggaatgattgccgcgcttgatcatataatcatgtatatactctattttgttagcaaaatgtagttacatgttgcaatttctactctatattttttggaagttttagttgtcaaataatcagccccctccatttttgtttaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="+" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="21518" stop="66096"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="21818" g_stop="22130" g_length="313"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="313" r_length="313" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="22131" i_stop="22955" i_length="825">
            <donor d_prob="0.000" d_score="0.96"/>
            <acceptor a_prob="0.666" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="22956" g_stop="22981" g_length="26"/>
          <reference_exon_boundary r_type="cDNA" r_start="314" r_stop="339" r_length="26" r_score="0.731"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="+" ref_id="SGN-E217576" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>339</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E217576" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="21818" e_stop="22130"/>
          <exon e_start="22956" e_stop="22981"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCAGAACTATGAAGAAGTTCTCATTGCTGCTAAGTATCAGTGGTGAGGTTCATTACTTGTAGATATTTGGGGGTTTTATCAAGTTCCAATGATGGCATTTCAGAGACATGTTACTGGTATCGCCACGAGAGGATGCAACAAGTTGGTTAACTATCATACTACTACCACGTCAGGAATGATTGCCGCGCTTGATCATATAATCATGTATATACTCTATTTTGTTAGCAAAATGTAGTTACATGTTGCAATTTCTACTCTATATTTTTTGGAAGTTTTAGTTGTCAAATAATCAGCCACCTCAATTTTTGTTTAGATGTATTCTCTCTCAATAATAAAATTGACCGACTCATCTAAACCACAATCAATCACTTCTGATGCTTTCCTTCAAGTAAAGCTTTTAGCGGACAATTGTTTCATATTGACAGTTCTCATGAGATCCACTAGCAGTATCCGTATTTATAAGAAGGAAAAAGTCTGATAATGCCATTGTGATTCATATATATTAGTGTTATCTTAAATGACTCATAATATTTTATTTTTTTTCTAATGGAAGTGATTTATTTTTAAAAAATAAATATAATTCATATGAGTACATTTAATCATTTTCGCACATTTTTTGACTTTTTTTTAATCTCTATGACAAATTTAAATTTTATTATTTTGCTAGTTAAATTTATTTATGTTTCATTAATTTTCTTGTAAAATTTATCATAGATGTTTTTTTTCAAATACAAAAAAATAAACTAGAGTAAGCCGAAAAAATAGTTTTAAATTATAATTAGCCACAGAAAAACAGTTTTAAAAATTTCTTCACGAATGAAAGAAAAAAATAAAATATAAATAAACAACTTTAATTATGATAATCAAAGAAGTAAAAAAAATTATGTATGAGAAGGATCTTATACATCACTACATGATTTTTTCTTTTTTAAAAAAATAGAAGTAAAAAGTTTGAAAATTATATCAAACGTTTTTCCCTTACTATAATACTACATACTTTACATCAAACAGGAAAACCTATTTATATATAATTTCTTATTATAAAAATCCTATTTAGACATGAATAAACAACTTCAGCCGTCCCTATTTACTTGTTCAACATTTTTTTTAATTGTCCTTATTTACTTGTCTATTTAGACAAATCAAAAAAGGACAAAAAGAAA</genome_strand>
        <mrna_strand>CTCAGAACTATGAAGAAGTTCTCATTGCTGCTAAGTATCAGTGGTGAGGTTCATTACTTGTAGATATTTGGGGGTTTTATCAAGTTCCAATGATGGCATTTCAGAGACATGTTACTGGTATCGCCACGAGAGGATGCAACAAGTTGGTTAACTATCATACTACTACCACGTCAGGAATGATTGCCGCGCTTGATCATATAATCATGTATATACTCTATTTTGTTAGCAAAATGTAGTTACATGTTGCAATTTCTACTCTATATTTTTTGGAAGTTTTAGTTGTCAAATAATCAGCCCCCTCCATTTTTGTTTA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E230105" ref_strand="+" ref_description="SGN-E230105 [cLEL-33-H7](-)">
      <seq>gaggatgcaacaagttggttaactatcatactactaccacgtcaggaatgattgccgcgcttgatcatataatcatgtatatactctattttgttagcaaaatgtagttacatgttgcaatttctactctatattttttggaagttttagttgtcaaataatcagccacctcaatttttgtttagatgtattctctctcaataataaaattgaccgactcatctaaaccacaatcaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="+" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="21647" stop="66089"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="21947" g_stop="22183" g_length="237"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="237" r_length="237" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="22184" i_stop="22955" i_length="772">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.666" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="22956" g_stop="22971" g_length="16"/>
          <reference_exon_boundary r_type="cDNA" r_start="238" r_stop="253" r_length="16" r_score="0.688"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="+" ref_id="SGN-E230105" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>253</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E230105" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="21947" e_stop="22183"/>
          <exon e_start="22956" e_stop="22971"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGGATGCAACAAGTTGGTTAACTATCATACTACTACCACGTCAGGAATGATTGCCGCGCTTGATCATATAATCATGTATATACTCTATTTTGTTAGCAAAATGTAGTTACATGTTGCAATTTCTACTCTATATTTTTTGGAAGTTTTAGTTGTCAAATAATCAGCCACCTCAATTTTTGTTTAGATGTATTCTCTCTCAATAATAAAATTGACCGACTCATCTAAACCACAATCAATCACTTCTGATGCTTTCCTTCAAGTAAAGCTTTTAGCGGACAATTGTTTCATATTGACAGTTCTCATGAGATCCACTAGCAGTATCCGTATTTATAAGAAGGAAAAAGTCTGATAATGCCATTGTGATTCATATATATTAGTGTTATCTTAAATGACTCATAATATTTTATTTTTTTTCTAATGGAAGTGATTTATTTTTAAAAAATAAATATAATTCATATGAGTACATTTAATCATTTTCGCACATTTTTTGACTTTTTTTTAATCTCTATGACAAATTTAAATTTTATTATTTTGCTAGTTAAATTTATTTATGTTTCATTAATTTTCTTGTAAAATTTATCATAGATGTTTTTTTTCAAATACAAAAAAATAAACTAGAGTAAGCCGAAAAAATAGTTTTAAATTATAATTAGCCACAGAAAAACAGTTTTAAAAATTTCTTCACGAATGAAAGAAAAAAATAAAATATAAATAAACAACTTTAATTATGATAATCAAAGAAGTAAAAAAAATTATGTATGAGAAGGATCTTATACATCACTACATGATTTTTTCTTTTTTAAAAAAATAGAAGTAAAAAGTTTGAAAATTATATCAAACGTTTTTCCCTTACTATAATACTACATACTTTACATCAAACAGGAAAACCTATTTATATATAATTTCTTATTATAAAAATCCTATTTAGACATGAATAAACAACTTCAGCCGTCCCTATTTACTTGTTCAACATTTTTTTTAATTGTCCTTATTTACTTGTCTATTTAGACAAATCAAAAAAGGA</genome_strand>
        <mrna_strand>GAGGATGCAACAAGTTGGTTAACTATCATACTACTACCACGTCAGGAATGATTGCCGCGCTTGATCATATAATCATGTATATACTCTATTTTGTTAGCAAAATGTAGTTACATGTTGCAATTTCTACTCTATATTTTTTGGAAGTTTTAGTTGTCAAATAATCAGCCACCTCAATTTTTGTTTAGATGTATTCTCTCTCAATAATAAAATTGACCGACTCATCTAAACCACAATCAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E572868" ref_strand="+" ref_description="SGN-E572868 [32089]">
      <seq>ccacggtcgtgtccggcgacatctccaccgaccaccgtcgctggaaggaggaaattcacttcatcgaccggaatctctatcgtcaccgacgctaaaagctgccggaaggaaaaaaatgtctattctatccttgcattctctcattttcaacgttaaaaccactgctaaatcctactgtttcacttcatttcttccttcttcttcaatctcaagctctaaatttagaaagctttcacaattttcaactcattcatcattcgatgattctcgagatttttttgtaccaaaacccaagcaaaacgacgatgattctgatgataaaccattctcatttgttgatgaatggggcgagaggtcgaaaccggagctccgacccatgacgaagttatcggaatcggatcctcctattgacgtagacgaatggggtagagctgagctagggatcaacaactcttcagggattgaagatgagtggggcgagaagtcgtttccggagctccgacccacgaaaacggtatcggattcggatcctcctattgacgaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="-" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="24227" stop="23122"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="23914" g_stop="23422" g_length="493"/>
          <reference_exon_boundary r_type="cDNA" r_start="51" r_stop="544" r_length="494" r_score="0.909"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="-" ref_id="SGN-E572868" ref_strand="+">
        <total_alignment_score>0.909</total_alignment_score>
        <cumulative_length_of_scored_exons>493</cumulative_length_of_scored_exons>
        <coverage percentage="0.906" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E572868" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="23914" e_stop="23422"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAATTCACTTCATCGGCCGGAATTTCTATCGTCAGCGACACTAAAAGCTGCCGGAAGAAAAAAAATGCCTATTCTACCCTTGCACTCTCTCATTTTCAACGTTAAAACCACTGTTAAATCCTATTGTTTCATTTC-TTTCTT-CTTCTTCTTCAATCTCAACCTCTAGATTTAGAAAGCTTTCACAATTTTCAATTCGTTCATCATTCAATGATACTCCGGATTTTTTTTGTACCAAAACTCAAGCAAAACGAAGATGATTCTGATGATAAAACATTCTCATTTGTTTATGAATGGGGCGAGAGGTCGAAACCAGAGCTCCGACCCATGACGTAGTTATCGGAAGCCGGACCCTCCTATTGAC-TAGATGAATGGGGTAGAGCTGAGCTAGGGATCAACAACTCTTCAGGGATTGAAGATGAGTGGGGTGAGAAGTCGTTTCCGGAGCTTCGACCCGCGAAAATGACATCGGCTTCGGATCCTCCTATCGACGAA</genome_strand>
        <mrna_strand>GAAATTCACTTCATCGACCGGAATCTCTATCGTCACCGACGCTAAAAGCTGCCGGAAGGAAAAAAATGTCTATTCTATCCTTGCATTCTCTCATTTTCAACGTTAAAACCACTGCTAAATCCTACTGTTTCACTTCATTTCTTCCTTCTTCTTCAATCTCAAGCTCTAAATTTAGAAAGCTTTCACAATTTTCAACTCATTCATCATTCGATGATTCTCGAGA-TTTTTTTGTACCAAAACCCAAGCAAAACGACGATGATTCTGATGATAAACCATTCTCATTTGTTGATGAATGGGGCGAGAGGTCGAAACCGGAGCTCCGACCCATGACGAAGTTATCGGAA-TCGGATCCTCCTATTGACGTAGACGAATGGGGTAGAGCTGAGCTAGGGATCAACAACTCTTCAGGGATTGAAGATGAGTGGGGCGAGAAGTCGTTTCCGGAGCTCCGACCCACGAAAACGGTATCGGATTCGGATCCTCCTATTGACGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E390404" ref_strand="+" ref_description="SGN-E390404 [TUS-41-O21](-)">
      <seq>gaggatacttggcagcaagttttggccttcagtcgtgctgtgcatgaaaatcttgaaggatatgatcgggaaggagcttggcctgttttgattgatgattttgttgagcacatgtacagggttggaggagttgatactatttctaactcattttgttgtagctgtggtaattcgggagcccagccatttgaggattcttaccctggattgataaattttcctggtatgaagaggaaatcttgtggcaatttacaaagagtagaagaatcatctcatggagatccaggcatggatgtgattgtcaattcgaagaggaggcacgttaattttggcaaccaaaatgttgactggacagaaaaccagtcacatggttactcggaaatggttaaagcaaatagcccattaaatcattttgcatctccctgcgctgttgaaggttgtttgtccaagggttttgcgggactgttgtcaggcccttcatgtttgcagtttgataaagaaaggagaacttcctatacataagaaggtttttgatcttgttcattactgcaatatatcagaaagtggcattttttatttcctgaagtagaactggggatatgtaggtttgacatgaggaagtattttttatttttgaaaaaaattaaattcgaactgtaatctttttgatgcttctttaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="-" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="27156" stop="24365"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26856" g_stop="26784" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="73" r_length="73" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="26783" i_stop="25976" i_length="808">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="25975" g_stop="25930" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="74" r_stop="119" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="25929" i_stop="25306" i_length="624">
            <donor d_prob="0.859" d_score="1.00"/>
            <acceptor a_prob="0.777" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="25305" g_stop="25220" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="120" r_stop="205" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="25219" i_stop="25141" i_length="79">
            <donor d_prob="0.596" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="25140" g_stop="24666" g_length="475"/>
          <reference_exon_boundary r_type="cDNA" r_start="206" r_stop="680" r_length="475" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="681" polyA_stop="692"/>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="-" ref_id="SGN-E390404" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>680</cumulative_length_of_scored_exons>
        <coverage percentage="0.983" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E390404" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26856" e_stop="26784"/>
          <exon e_start="25975" e_stop="25930"/>
          <exon e_start="25305" e_stop="25220"/>
          <exon e_start="25140" e_stop="24666"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGGATACTTGGCAGCAAGTTTTGGCCTTCAGTCGTGCTGTGCATGAAAATCTTGAAGGATATGATCGGGAAGGTATTAAATTTACGCTATTTAGCTTTCAATCATCACCATCCAGGACATGTCAATGTCACCCTAAAATCATACTTAATAGAGACGTATTGTAGTTTGGTTCCTGAATTTGGTATTTTATATTTCTTCTATTTAAGAAGTATCCTTTTTTTTCAATTCCAGCTAGTTGGTATCATCAATGCATCCTTTGCTTCTGTGATGTTCTATTTATGCTATTATCAGAGATTTTAACGAAAGTTATTTGCAAGACAATAGCTGCAAAATGTGGGTTCTTAGTTTGAAAGAAAGGTAGTTAAAAGTTACTCAATCTTGTGGTAATCTGATCATCAAAGTTTAATTTGAAAGTTTGATTTGTGTATTGAATTGGTAAGATCATGCAAAGCATAGTTAGTGATGCAAAAACATCACTTCATTGTTTAACTGAGTCTGAATTTTGTATGAAGAGTCTTATAGAATTTTATTATTTGATTGAAATGTGTCAAACTTTTTGAGAAGTCCTAAGATTGAAAGACTATCATATAAAAATACTGTAGGAAGGAGAAACATTTTTCAGGTCCCAGAAGTAGAAGGTTAATTTTGTTTTCCGCTGCCACAATTATTTTCTGTTTTGCCTTGTCGTTCTTTTATCTTGAGTAATTAGTCCTTTACGATATATAATATTGGAATGAATTTGCACTTCTTTGGTATTGTGGAAAGATGATTATGTTTAGAATAGCTGCTTCCATTTTTCATATTTTGTGTTTCGATCTTACTAATCCCACCGGCCCACTCCTTTAATCATTATGTTTTTTTGTGGTGATGTTCTCTGCAGGAGCTTGGCCTGTTTTGATTGATGATTTTGTTGAGCACATGTACAGGTGGCTACTAACCAATTTTTCTCGTGGAAATTAATTCCAATGTGTTTCTGCTTCTTTCATCTAGATTATATTGGTCATGTTAAGAAATATTTACTTGGAACGGTAATGGGTTTTCTTCCCTTTTCTCCACTTTTGCGGCACAAAGAGGTTAGAGACCATGTCTGGCATGTGTATCTTAGAGATGTAATTACCCTCTATTGCTTATGCTTAGAGAAGATAAGCTTGGTATGATATGATTCAGGAGATTGATCCTCATCATTCACTTGTATCATTTAAGATATTCATCTTATTGGATGAAATAAGTTCCGGGGACTAACTCGGGTGATTGATGTATAGAACTTTGTGGACTTGGTGTCTGTCTTGGACGGTCATGGTTGTGTAGTTCATGGCCTACACAATTTGTGGTTGGTTCCTTCCATGGAATTTTATTACATGGTCTATTTTTCTCTTACATGAAGGATGTGTCTAAATTTAGATTCCGATTCAGACTGCAGCATAAACTAAAAGGGAAATCTTGGCCTTGCTTTAGCTAGCATTCCGTAACGGTCTATGCACTTTTGAATGCCAAGCAATTTGCACTGCATTTTTTAAGACTAGATTTGACGAGGCAGATTTGTTATGCAGGGTTGGAGGAGTTGATACTATTTCTAACTCATTTTGTTGTAGCTGTGGTAATTCGGGAGCCCAGCCATTTGAGGATTCTTACCCTGGTAATTGCGGCTAAAGATACTGTCTTGGTTCACACTGAATTATCTATACTATTATTACTTATCTGTGTTCTTGGTGCAGGATTGATAAATTTTCCTGGTATGAAGAGGAAATCTTGTGGCAATTTACAAAGAGTAGAAGAATCATCTCATGGAGATCCAGGCATGGATGTGATTGTCAATTCGAAGAGGAGGCACGTTAATTTTGGCAACCAAAATGTTGACTGGACAGAAAACCAGTCACATGGTTACTCGGAAATGGTTAAAGCAAATAGCCCATTAAATCATTCTGCATCTCCCTGCGCTGTTGAAGGTTGTTTGTCCAAGGGTTTTGCGGGACTGTTGTCAGGCCCTTCATGTTTGCAGTTTGATAAAGAAAGGAGAACTTCCTATACATAAGAAGGTTTTTGATCTTGTTCATTACTGCAATATATCAGAAAGTGGCATTTTTTATTTCCTGAAGTAGAACTGGGGATATGTAGGTTTGACATGAGGAAGTATTTTTTATTTTTGAAAAAAATTAAATTCGAACTGTAATCTTTCTGATGCTTCTTTAA</genome_strand>
        <mrna_strand>GAGGATACTTGGCAGCAAGTTTTGGCCTTCAGTCGTGCTGTGCATGAAAATCTTGAAGGATATGATCGGGAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCTTGGCCTGTTTTGATTGATGATTTTGTTGAGCACATGTACAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTGGAGGAGTTGATACTATTTCTAACTCATTTTGTTGTAGCTGTGGTAATTCGGGAGCCCAGCCATTTGAGGATTCTTACCCTG...............................................................................GATTGATAAATTTTCCTGGTATGAAGAGGAAATCTTGTGGCAATTTACAAAGAGTAGAAGAATCATCTCATGGAGATCCAGGCATGGATGTGATTGTCAATTCGAAGAGGAGGCACGTTAATTTTGGCAACCAAAATGTTGACTGGACAGAAAACCAGTCACATGGTTACTCGGAAATGGTTAAAGCAAATAGCCCATTAAATCATTTTGCATCTCCCTGCGCTGTTGAAGGTTGTTTGTCCAAGGGTTTTGCGGGACTGTTGTCAGGCCCTTCATGTTTGCAGTTTGATAAAGAAAGGAGAACTTCCTATACATAAGAAGGTTTTTGATCTTGTTCATTACTGCAATATATCAGAAAGTGGCATTTTTTATTTCCTGAAGTAGAACTGGGGATATGTAGGTTTGACATGAGGAAGTATTTTTTATTTTTGAAAAAAATTAAATTCGAACTGTAATCTTTTTGATGCTTCTTTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E576198" ref_strand="+" ref_description="SGN-E576198 [59379]">
      <seq>cctcgtgccggttgaattagggttctatattgcgaaccctaaaattccagtgtgttcctaattcttgtagccatggactctcccgctgcaaatcacttggatatattcgatatctatagccgatactgtgatatcatgtcaggggcatatgctaccaggaacctagtagatgaattgcagaaagcgagatttacaagagaggcattgaaccagcttacgaaattagtggattcaagtttgcatataaggcatgtatttgggcaactatctttgaagaagtgtacaagcttaagttgcggttgaatttggaggcagacttctctgagttctcgcgtttctatgattttgtcttcttcgttttcagagaaaatggacaaaaaaacatcgctataagcaaagctgttactggttggaaaatagttttagctggtaggtttcggctacttgatcactggtgcgactttgttgagataaaccagcgatacaatatatctgaggatacttggcagcaagttttggccttcagccgttctgtgcatgaaaatcttgaaggatatgatcgggaaggagcttggcctgttttgattgatgactttgtttgagcacatgtacaggattggaggagtcgatactat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="-" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="29798" stop="25626"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29509" g_stop="29380" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="130" r_length="130" r_score="0.892"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29379" i_stop="29020" i_length="360">
            <donor d_prob="0.985" d_score="0.96"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29019" g_stop="28891" g_length="129"/>
          <reference_exon_boundary r_type="cDNA" r_start="131" r_stop="259" r_length="129" r_score="0.984"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28890" i_stop="28293" i_length="598">
            <donor d_prob="0.000" d_score="0.98"/>
            <acceptor a_prob="0.679" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="28292" g_stop="28241" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="260" r_stop="311" r_length="52" r_score="0.981"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="28240" i_stop="28095" i_length="146">
            <donor d_prob="0.377" d_score="0.98"/>
            <acceptor a_prob="0.793" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="28094" g_stop="28019" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="312" r_stop="387" r_length="76" r_score="0.974"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="28018" i_stop="27906" i_length="113">
            <donor d_prob="0.806" d_score="0.96"/>
            <acceptor a_prob="0.687" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="27905" g_stop="27823" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="388" r_stop="470" r_length="83" r_score="0.976"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="27822" i_stop="26881" i_length="942">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.809" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="26880" g_stop="26784" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="471" r_stop="567" r_length="97" r_score="0.948"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="26783" i_stop="25976" i_length="808">
            <donor d_prob="0.985" d_score="0.96"/>
            <acceptor a_prob="0.984" a_score="0.93"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="25975" g_stop="25930" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="568" r_stop="614" r_length="47" r_score="0.935"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="-" ref_id="SGN-E576198" ref_strand="+">
        <total_alignment_score>0.954</total_alignment_score>
        <cumulative_length_of_scored_exons>613</cumulative_length_of_scored_exons>
        <coverage percentage="0.965" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E576198" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29509" e_stop="29380"/>
          <exon e_start="29019" e_stop="28891"/>
          <exon e_start="28292" e_stop="28241"/>
          <exon e_start="28094" e_stop="28019"/>
          <exon e_start="27905" e_stop="27823"/>
          <exon e_start="26880" e_stop="26784"/>
          <exon e_start="25975" e_stop="25930"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTTGCTATCTTTGAATTAGGGTTCTATATTACGAACCCTAAAATTCCAGTTCGTTCCTAATTCTTGTAGCCATGGACTCTCCCGCTGCAAATCACTTGGATATATTCGATATCTACGGCCGATACTGTGGTATTTTAATCCAGATTCCATTCCTTGTAGTTTTAATTTCGTAATTTTTGTTTCTCCTTATGGATTATCATTAATTTAATACTACTAAATTCCAAACTAGTTGATTTGTCTATATGAATTGAACCGATTCATTCAAGAAATTATGCAAGGCTTCATACTTTTGTTTTTGATCTGGAAGTTACGGTTGTCCCTAGGTCTCCGTGTTTTTATGTGAAGGCGTTGATGTTCTTGTTTTGCATTGATTTAACTTTTTGTAATTTGTTTGAATTTTTTCATTATACATGAACAAGTCAGGTTTATGTAATTAATTGGTGTTTTTTCACTTATGTTGATCTGCTTAGTGATGTATTTGCTTTGCAGATATCATGTCAGGGGCATATGCTACCAGGAACCTAGTAGATGAATTGCAGAAAGCCAGATTTACAAGAGAGGCATTGAACCAGCTTATGAAATTAGTGGATTCAAGTTTGCATATAAGGCATGTATTTGGTAGGACATGGAACTAGCAGCATTTTTGATCTTTTATGTATGTCTGGATTCTAAGAGTCCAAAACTATATCTACAAGAGTTCAAGTTTCCTCTTTCCCCTTGAAACACCAACATGGAACACTTGCAAATGCTTGATCCATATCAAAGAAAAGTTGGGACTTCTGTATGCATAATACCTTTTTAAAATAAAAAATACTTACAGCTATTGCTCTTTCTGTCTTGCAAAGACAAAGGTCTAACGGTTGAACCGTTGAGAGAATAACAGCAACTCAAATTGATTTTCTTGGACGGTTTCTAACAGATTTGTGATTGATTTGAATGTCACTTCTGCTTTGGGTAGGAATATGTGTTGTTTATTACATTGGGAAGCCTGATACATTTGCCAGATGTACTACGTGATTCTCAAGACCAATGCTGAAATCCTTGTTCTGCCGTTACATTTTTATCGGTGCTTTCTGTCTAAATTCTTTTGTGATCGTGTGGCTTACTTGTGTTAGTCTTAGATCACCTTTCGTTACGTTGGGGGGCGGGGGGGGGGGGGGGGGAAGGAATAGATAGAGGTTGCCAATATTGACAAATTTGTTTTCAACCATGGCAGGGCGACTATCTTTGAAGAAGTGTACAAGCTTAAGTTGCGGTTGAATTTGGAGGTTTGTTGATTGGATGATGTTATGATGGCTGGATTTTATTTAGTGTGAAACTATCCACATCCATCTCTCTTAGAGTTGGCCTTTTAATACAATACAAAGTATTTCAATCATCAAAAAAGGAACTTACATTGTATTTCCTTTTGTAGGCAGACTTCTCTGAGTTCTCGCGTTTCTATGATTTTGTCTTCTTCGTTTTCAGAGAAAATGGACAAAAGAACATCAGTAAGTTGATTACCTTGTAGATGATTTTGCAGCAGTGTGCTCATTCTTTGTAAAGCATTCATAGTGCAGTTAGTTTGTTTTTTTTAACTTATGTTGAGTTTAAAATATTTCAGCTATAAGTAAAGCTGTTACTGGTTGGAAAATAGTTTTAGCTGGAAGGTTTCGGCTACTTGATCACTGGTGCGACTTTGTTGAGGTAAGTGTCAGTGACTCTTATTGATTGATTTGTTGTCATGTGTTCAAACTTCAAATTGCATTTTTCATCTGTTTGTATGTGTTAAGAATTATCGAATTTTAAGACTGAATAAATTCATCAATTACAGAGGATCCATGTGCTTGTAACTTTGCTTCGTTAAGGTTATTTGAGTAGACAATTAAGTCTACTTTATTAAGTTTGTCTTAAGGGTCAATAGAATACAAACAATAAGGTTTTGTCAGCTGATGAATAGACGTCGAATATCGTGGGATGTCATGTCATTAGCACCTATGTTAGTTATAGGCTTATGTAAGGAAGAAACAGGAGAAGACATGGCTGTTTATTGAGGAACGTCCTCGCACTTGTAGTTTCTTCTTTGACCCATGAAATTCTTGTTTGTGTAACACTTTAGGAGTTATTAGTACAGAATCCTATTTTTTTTCTTGTACTGCTTGTATGCATGAGATTTTCATAGCAGCAACGCAATAATTAAGCTTTAGTTCCAAACATGTGAGGTGCATCATGAAATTGACTAGTTTTTGGTTGGCTGGTTGCCTGCTGCAACTCCCCTCCATTTATCCAACTTTAGAACCGGCAATGTGAGCAATCTTTACCAGCTGGAGTTATACATGCGATTTTCCCATTATTAAAAAAATTTTGCAAAAGAAAAAAAAGTTTTTCCATCTGGTAGATTTTCTTCTTTTTGTTCTTTCTGATTGTGGTTGTTTTAGCTGTCTTGTGTTTTTGGTTTGGGCATTGAGACTTTCAGTTGTAGCTGGATTGTGGCAGCCAATGCATTATTTAGGCTTATATTTGTCAACTTAAATCCATGGTGGTACCTTACTTTACAAAGACTGATATTCTACTTTATGGTTGGGTGACTGCTGAATGTTGGTAACTTGCAATTTTCCTATAGTGATTATTGTTTACTGAAATCTCCAGAAAAAACAGCGATATAATATATCTGAGGATACTTGGCAGCAAGTTTTGGCCTTCAGTCGTGCTGTGCATGAAAATCTTGAAGGATATGATCGGGAAGGTATTAAATTTACGCTATTTAGCTTTCAATCATCACCATCCAGGACATGTCAATGTCACCCTAAAATCATACTTAATAGAGACGTATTGTAGTTTGGTTCCTGAATTTGGTATTTTATATTTCTTCTATTTAAGAAGTATCCTTTTTTTTCAATTCCAGCTAGTTGGTATCATCAATGCATCCTTTGCTTCTGTGATGTTCTATTTATGCTATTATCAGAGATTTTAACGAAAGTTATTTGCAAGACAATAGCTGCAAAATGTGGGTTCTTAGTTTGAAAGAAAGGTAGTTAAAAGTTACTCAATCTTGTGGTAATCTGATCATCAAAGTTTAATTTGAAAGTTTGATTTGTGTATTGAATTGGTAAGATCATGCAAAGCATAGTTAGTGATGCAAAAACATCACTTCATTGTTTAACTGAGTCTGAATTTTGTATGAAGAGTCTTATAGAATTTTATTATTTGATTGAAATGTGTCAAACTTTTTGAGAAGTCCTAAGATTGAAAGACTATCATATAAAAATACTGTAGGAAGGAGAAACATTTTTCAGGTCCCAGAAGTAGAAGGTTAATTTTGTTTTCCGCTGCCACAATTATTTTCTGTTTTGCCTTGTCGTTCTTTTATCTTGAGTAATTAGTCCTTTACGATATATAATATTGGAATGAATTTGCACTTCTTTGGTATTGTGGAAAGATGATTATGTTTAGAATAGCTGCTTCCATTTTTCATATTTTGTGTTTCGATCTTACTAATCCCACCGGCCCACTCCTTTAATCATTATGTTTTTTTGTGGTGATGTTCTCTGCAGGAGCTTGGCCTGTTTTGATTGATGATTTTG-TTGAGCACATGTACAG</genome_strand>
        <mrna_strand>CCTCGTGCCGGTTGAATTAGGGTTCTATATTGCGAACCCTAAAATTCCAGTGTGTTCCTAATTCTTGTAGCCATGGACTCTCCCGCTGCAAATCACTTGGATATATTCGATATCTATAGCCGATACTGTG........................................................................................................................................................................................................................................................................................................................................................................ATATCATGTCAGGGGCATATGCTACCAGGAACCTAGTAGATGAATTGCAGAAAGCGAGATTTACAAGAGAGGCATTGAACCAGCTTACGAAATTAGTGGATTCAAGTTTGCATATAAGGCATGTATTTG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCAACTATCTTTGAAGAAGTGTACAAGCTTAAGTTGCGGTTGAATTTGGAG..................................................................................................................................................GCAGACTTCTCTGAGTTCTCGCGTTTCTATGATTTTGTCTTCTTCGTTTTCAGAGAAAATGGACAAAAAAACATCG.................................................................................................................CTATAAGCAAAGCTGTTACTGGTTGGAAAATAGTTTTAGCTGGTAGGTTTCGGCTACTTGATCACTGGTGCGACTTTGTTGAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAAACCAGCGATACAATATATCTGAGGATACTTGGCAGCAAGTTTTGGCCTTCAGCCGTTCTGTGCATGAAAATCTTGAAGGATATGATCGGGAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCTTGGCCTGTTTTGATTGATGACTTTGTTTGAGCACATGTACAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E390198" ref_strand="+" ref_description="SGN-E390198 [TUS-41-O21]">
      <seq>cttgggacaaaaaatattactagtatcagaatattccggtaacgttgcagataaattgtgccccaattcaaaagaagcaaaatcaatcgataactggaaagaaagctctgtgttgctatctttgaattagggttctatattacgaaccctaaaattccagttcgttcctaattcttgtagccatggactctcccgctgcaaatcacttggatatattcgatatctacggccgatactgtgatatcatgtcaggggcatatgctaccaggaacctagtagatgaattgcagaaagccagatttacaagagaggcattgaaccagcttatgaaattagtggattcaagtttgcatataaggcatgtatttgggcgactatctttgaagaagtgtacaagcttaagttgcggttgaatttggaggcagacttctctgagttctcgcgtttctatgattttgtcttcttcgttttcagagaaaatggacaaaagaacatcactataagtaaagctgttactggttggaaaatagttttagctggaaggtttcggctacttgatcactggtgcgactttgttgagaaaaaacagcgatataatatatctgaggatacttggcagcaagtttttggcttcagtcgtgctgtgcatgaaaatcttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="-" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="29919" stop="26502"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29619" g_stop="29380" g_length="240"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="240" r_length="240" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29379" i_stop="29020" i_length="360">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29019" g_stop="28891" g_length="129"/>
          <reference_exon_boundary r_type="cDNA" r_start="241" r_stop="369" r_length="129" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28890" i_stop="28293" i_length="598">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.679" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="28292" g_stop="28241" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="370" r_stop="421" r_length="52" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="28240" i_stop="28095" i_length="146">
            <donor d_prob="0.377" d_score="1.00"/>
            <acceptor a_prob="0.793" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="28094" g_stop="28019" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="422" r_stop="497" r_length="76" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="28018" i_stop="27906" i_length="113">
            <donor d_prob="0.806" d_score="1.00"/>
            <acceptor a_prob="0.687" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="27905" g_stop="27823" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="498" r_stop="580" r_length="83" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="27822" i_stop="26881" i_length="942">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.809" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="26880" g_stop="26802" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="581" r_stop="659" r_length="79" r_score="0.975"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="-" ref_id="SGN-E390198" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>659</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E390198" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29619" e_stop="29380"/>
          <exon e_start="29019" e_stop="28891"/>
          <exon e_start="28292" e_stop="28241"/>
          <exon e_start="28094" e_stop="28019"/>
          <exon e_start="27905" e_stop="27823"/>
          <exon e_start="26880" e_stop="26802"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTGGGACAAAAAATATTACTAGTATCAGAATATTCCGGTAACGTTGCAGATAAATTGTGCCCCAATTCAAAAGAAGCAAAATCAATCGATAACTGGAAAGAAAGCTCTGTGTTGCTATCTTTGAATTAGGGTTCTATATTACGAACCCTAAAATTCCAGTTCGTTCCTAATTCTTGTAGCCATGGACTCTCCCGCTGCAAATCACTTGGATATATTCGATATCTACGGCCGATACTGTGGTATTTTAATCCAGATTCCATTCCTTGTAGTTTTAATTTCGTAATTTTTGTTTCTCCTTATGGATTATCATTAATTTAATACTACTAAATTCCAAACTAGTTGATTTGTCTATATGAATTGAACCGATTCATTCAAGAAATTATGCAAGGCTTCATACTTTTGTTTTTGATCTGGAAGTTACGGTTGTCCCTAGGTCTCCGTGTTTTTATGTGAAGGCGTTGATGTTCTTGTTTTGCATTGATTTAACTTTTTGTAATTTGTTTGAATTTTTTCATTATACATGAACAAGTCAGGTTTATGTAATTAATTGGTGTTTTTTCACTTATGTTGATCTGCTTAGTGATGTATTTGCTTTGCAGATATCATGTCAGGGGCATATGCTACCAGGAACCTAGTAGATGAATTGCAGAAAGCCAGATTTACAAGAGAGGCATTGAACCAGCTTATGAAATTAGTGGATTCAAGTTTGCATATAAGGCATGTATTTGGTAGGACATGGAACTAGCAGCATTTTTGATCTTTTATGTATGTCTGGATTCTAAGAGTCCAAAACTATATCTACAAGAGTTCAAGTTTCCTCTTTCCCCTTGAAACACCAACATGGAACACTTGCAAATGCTTGATCCATATCAAAGAAAAGTTGGGACTTCTGTATGCATAATACCTTTTTAAAATAAAAAATACTTACAGCTATTGCTCTTTCTGTCTTGCAAAGACAAAGGTCTAACGGTTGAACCGTTGAGAGAATAACAGCAACTCAAATTGATTTTCTTGGACGGTTTCTAACAGATTTGTGATTGATTTGAATGTCACTTCTGCTTTGGGTAGGAATATGTGTTGTTTATTACATTGGGAAGCCTGATACATTTGCCAGATGTACTACGTGATTCTCAAGACCAATGCTGAAATCCTTGTTCTGCCGTTACATTTTTATCGGTGCTTTCTGTCTAAATTCTTTTGTGATCGTGTGGCTTACTTGTGTTAGTCTTAGATCACCTTTCGTTACGTTGGGGGGCGGGGGGGGGGGGGGGGGAAGGAATAGATAGAGGTTGCCAATATTGACAAATTTGTTTTCAACCATGGCAGGGCGACTATCTTTGAAGAAGTGTACAAGCTTAAGTTGCGGTTGAATTTGGAGGTTTGTTGATTGGATGATGTTATGATGGCTGGATTTTATTTAGTGTGAAACTATCCACATCCATCTCTCTTAGAGTTGGCCTTTTAATACAATACAAAGTATTTCAATCATCAAAAAAGGAACTTACATTGTATTTCCTTTTGTAGGCAGACTTCTCTGAGTTCTCGCGTTTCTATGATTTTGTCTTCTTCGTTTTCAGAGAAAATGGACAAAAGAACATCAGTAAGTTGATTACCTTGTAGATGATTTTGCAGCAGTGTGCTCATTCTTTGTAAAGCATTCATAGTGCAGTTAGTTTGTTTTTTTTAACTTATGTTGAGTTTAAAATATTTCAGCTATAAGTAAAGCTGTTACTGGTTGGAAAATAGTTTTAGCTGGAAGGTTTCGGCTACTTGATCACTGGTGCGACTTTGTTGAGGTAAGTGTCAGTGACTCTTATTGATTGATTTGTTGTCATGTGTTCAAACTTCAAATTGCATTTTTCATCTGTTTGTATGTGTTAAGAATTATCGAATTTTAAGACTGAATAAATTCATCAATTACAGAGGATCCATGTGCTTGTAACTTTGCTTCGTTAAGGTTATTTGAGTAGACAATTAAGTCTACTTTATTAAGTTTGTCTTAAGGGTCAATAGAATACAAACAATAAGGTTTTGTCAGCTGATGAATAGACGTCGAATATCGTGGGATGTCATGTCATTAGCACCTATGTTAGTTATAGGCTTATGTAAGGAAGAAACAGGAGAAGACATGGCTGTTTATTGAGGAACGTCCTCGCACTTGTAGTTTCTTCTTTGACCCATGAAATTCTTGTTTGTGTAACACTTTAGGAGTTATTAGTACAGAATCCTATTTTTTTTCTTGTACTGCTTGTATGCATGAGATTTTCATAGCAGCAACGCAATAATTAAGCTTTAGTTCCAAACATGTGAGGTGCATCATGAAATTGACTAGTTTTTGGTTGGCTGGTTGCCTGCTGCAACTCCCCTCCATTTATCCAACTTTAGAACCGGCAATGTGAGCAATCTTTACCAGCTGGAGTTATACATGCGATTTTCCCATTATTAAAAAAATTTTGCAAAAGAAAAAAAAGTTTTTCCATCTGGTAGATTTTCTTCTTTTTGTTCTTTCTGATTGTGGTTGTTTTAGCTGTCTTGTGTTTTTGGTTTGGGCATTGAGACTTTCAGTTGTAGCTGGATTGTGGCAGCCAATGCATTATTTAGGCTTATATTTGTCAACTTAAATCCATGGTGGTACCTTACTTTACAAAGACTGATATTCTACTTTATGGTTGGGTGACTGCTGAATGTTGGTAACTTGCAATTTTCCTATAGTGATTATTGTTTACTGAAATCTCCAGAAAAAACAGCGATATAATATATCTGAGGATACTTGGCAGCAAGTTTTGGCCTTCAGTCGTGCTGTGCATGAAAATCTTG</genome_strand>
        <mrna_strand>CTTGGGACAAAAAATATTACTAGTATCAGAATATTCCGGTAACGTTGCAGATAAATTGTGCCCCAATTCAAAAGAAGCAAAATCAATCGATAACTGGAAAGAAAGCTCTGTGTTGCTATCTTTGAATTAGGGTTCTATATTACGAACCCTAAAATTCCAGTTCGTTCCTAATTCTTGTAGCCATGGACTCTCCCGCTGCAAATCACTTGGATATATTCGATATCTACGGCCGATACTGTG........................................................................................................................................................................................................................................................................................................................................................................ATATCATGTCAGGGGCATATGCTACCAGGAACCTAGTAGATGAATTGCAGAAAGCCAGATTTACAAGAGAGGCATTGAACCAGCTTATGAAATTAGTGGATTCAAGTTTGCATATAAGGCATGTATTTG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGACTATCTTTGAAGAAGTGTACAAGCTTAAGTTGCGGTTGAATTTGGAG..................................................................................................................................................GCAGACTTCTCTGAGTTCTCGCGTTTCTATGATTTTGTCTTCTTCGTTTTCAGAGAAAATGGACAAAAGAACATCA.................................................................................................................CTATAAGTAAAGCTGTTACTGGTTGGAAAATAGTTTTAGCTGGAAGGTTTCGGCTACTTGATCACTGGTGCGACTTTGTTGAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAACAGCGATATAATATATCTGAGGATACTTGGCAGCAAGTTTTTGGCTTCAGTCGTGCTGTGCATGAAAATCTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E306666" ref_strand="+" ref_description="SGN-E306666 [cLEY-19-C7]">
      <seq>tagcatcagaatattccgggagcggggcagatttatagtgccccaacccaaaacaagcaaaatcaatcgataactggaaagaaagctctgtgttgctatctttgaattagggttctatattacgaaccctaaaattccagttcgttcctaattcttgtagccaaggactctcccgctgcaaatcacttggatatattcgatatctacggccgatactgtgatatcatgtcaggggcatatgctaccaggaacctagtagatgaattgcagaaagccagatttacaagagaggcattgaaccagcttatgaaattagtggattcaagtttgcatataaggcatgtatttgggcgactatctttgaagaagtgtacaagcttaagttgcgggtgaatttggaggcagacttctctgagttctcgcgtttctatgattttgtcttcttcgtcttcagagaaaatggacaaaagaacatcactataagtaaagctgttactggttggaaaatagtttta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="-" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="29899" stop="27568"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29599" g_stop="29380" g_length="220"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="220" r_length="220" r_score="0.945"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29379" i_stop="29020" i_length="360">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29019" g_stop="28891" g_length="129"/>
          <reference_exon_boundary r_type="cDNA" r_start="221" r_stop="349" r_length="129" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28890" i_stop="28293" i_length="598">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.679" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="28292" g_stop="28241" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="350" r_stop="401" r_length="52" r_score="0.981"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="28240" i_stop="28095" i_length="146">
            <donor d_prob="0.377" d_score="0.98"/>
            <acceptor a_prob="0.793" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="28094" g_stop="28019" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="402" r_stop="477" r_length="76" r_score="0.987"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="28018" i_stop="27906" i_length="113">
            <donor d_prob="0.806" d_score="0.98"/>
            <acceptor a_prob="0.687" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="27905" g_stop="27868" g_length="38"/>
          <reference_exon_boundary r_type="cDNA" r_start="478" r_stop="515" r_length="38" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="-" ref_id="SGN-E306666" ref_strand="+">
        <total_alignment_score>0.971</total_alignment_score>
        <cumulative_length_of_scored_exons>515</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E306666" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29599" e_stop="29380"/>
          <exon e_start="29019" e_stop="28891"/>
          <exon e_start="28292" e_stop="28241"/>
          <exon e_start="28094" e_stop="28019"/>
          <exon e_start="27905" e_stop="27868"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGTATCAGAATATTCCGGTAACGTTGCAGATAAATTGTGCCCCAATTCAAAAGAAGCAAAATCAATCGATAACTGGAAAGAAAGCTCTGTGTTGCTATCTTTGAATTAGGGTTCTATATTACGAACCCTAAAATTCCAGTTCGTTCCTAATTCTTGTAGCCATGGACTCTCCCGCTGCAAATCACTTGGATATATTCGATATCTACGGCCGATACTGTGGTATTTTAATCCAGATTCCATTCCTTGTAGTTTTAATTTCGTAATTTTTGTTTCTCCTTATGGATTATCATTAATTTAATACTACTAAATTCCAAACTAGTTGATTTGTCTATATGAATTGAACCGATTCATTCAAGAAATTATGCAAGGCTTCATACTTTTGTTTTTGATCTGGAAGTTACGGTTGTCCCTAGGTCTCCGTGTTTTTATGTGAAGGCGTTGATGTTCTTGTTTTGCATTGATTTAACTTTTTGTAATTTGTTTGAATTTTTTCATTATACATGAACAAGTCAGGTTTATGTAATTAATTGGTGTTTTTTCACTTATGTTGATCTGCTTAGTGATGTATTTGCTTTGCAGATATCATGTCAGGGGCATATGCTACCAGGAACCTAGTAGATGAATTGCAGAAAGCCAGATTTACAAGAGAGGCATTGAACCAGCTTATGAAATTAGTGGATTCAAGTTTGCATATAAGGCATGTATTTGGTAGGACATGGAACTAGCAGCATTTTTGATCTTTTATGTATGTCTGGATTCTAAGAGTCCAAAACTATATCTACAAGAGTTCAAGTTTCCTCTTTCCCCTTGAAACACCAACATGGAACACTTGCAAATGCTTGATCCATATCAAAGAAAAGTTGGGACTTCTGTATGCATAATACCTTTTTAAAATAAAAAATACTTACAGCTATTGCTCTTTCTGTCTTGCAAAGACAAAGGTCTAACGGTTGAACCGTTGAGAGAATAACAGCAACTCAAATTGATTTTCTTGGACGGTTTCTAACAGATTTGTGATTGATTTGAATGTCACTTCTGCTTTGGGTAGGAATATGTGTTGTTTATTACATTGGGAAGCCTGATACATTTGCCAGATGTACTACGTGATTCTCAAGACCAATGCTGAAATCCTTGTTCTGCCGTTACATTTTTATCGGTGCTTTCTGTCTAAATTCTTTTGTGATCGTGTGGCTTACTTGTGTTAGTCTTAGATCACCTTTCGTTACGTTGGGGGGCGGGGGGGGGGGGGGGGGAAGGAATAGATAGAGGTTGCCAATATTGACAAATTTGTTTTCAACCATGGCAGGGCGACTATCTTTGAAGAAGTGTACAAGCTTAAGTTGCGGTTGAATTTGGAGGTTTGTTGATTGGATGATGTTATGATGGCTGGATTTTATTTAGTGTGAAACTATCCACATCCATCTCTCTTAGAGTTGGCCTTTTAATACAATACAAAGTATTTCAATCATCAAAAAAGGAACTTACATTGTATTTCCTTTTGTAGGCAGACTTCTCTGAGTTCTCGCGTTTCTATGATTTTGTCTTCTTCGTTTTCAGAGAAAATGGACAAAAGAACATCAGTAAGTTGATTACCTTGTAGATGATTTTGCAGCAGTGTGCTCATTCTTTGTAAAGCATTCATAGTGCAGTTAGTTTGTTTTTTTTAACTTATGTTGAGTTTAAAATATTTCAGCTATAAGTAAAGCTGTTACTGGTTGGAAAATAGTTTTA</genome_strand>
        <mrna_strand>TAGCATCAGAATATTCCGGGAGCGGGGCAGATTTATAGTGCCCCAACCCAAAACAAGCAAAATCAATCGATAACTGGAAAGAAAGCTCTGTGTTGCTATCTTTGAATTAGGGTTCTATATTACGAACCCTAAAATTCCAGTTCGTTCCTAATTCTTGTAGCCAAGGACTCTCCCGCTGCAAATCACTTGGATATATTCGATATCTACGGCCGATACTGTG........................................................................................................................................................................................................................................................................................................................................................................ATATCATGTCAGGGGCATATGCTACCAGGAACCTAGTAGATGAATTGCAGAAAGCCAGATTTACAAGAGAGGCATTGAACCAGCTTATGAAATTAGTGGATTCAAGTTTGCATATAAGGCATGTATTTG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGACTATCTTTGAAGAAGTGTACAAGCTTAAGTTGCGGGTGAATTTGGAG..................................................................................................................................................GCAGACTTCTCTGAGTTCTCGCGTTTCTATGATTTTGTCTTCTTCGTCTTCAGAGAAAATGGACAAAAGAACATCA.................................................................................................................CTATAAGTAAAGCTGTTACTGGTTGGAAAATAGTTTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E306660" ref_strand="+" ref_description="SGN-E306660 [cLEY-19-A9]">
      <seq>caaaagaagcaaaatcaatacgataactcggaaagaaagctctgtgttgctatctttgaattagggttctatattacaaaccctaaaattccaggtcgatcctaattcttgtagccatggactctcccgctgcaaatcacttggatatattcgatatctacgggcgatactgtgatatcatgtcaggggcatatgctaccaggaacctactagatgaattgcagaaagccagatttacaagagaggcattgaaccagcttatgaaattagtggattcaagtttgcatataaggcatgtatttgggcgactatctttgaagaagtgtacaagcttaagttgcggttgaatttgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="-" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="29851" stop="27943"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29551" g_stop="29380" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="174" r_length="174" r_score="0.953"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29379" i_stop="29020" i_length="360">
            <donor d_prob="0.985" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29019" g_stop="28902" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="175" r_stop="292" r_length="118" r_score="0.992"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28901" i_stop="28551" i_length="351">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.693" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="28550" g_stop="28540" g_length="11"/>
          <reference_exon_boundary r_type="cDNA" r_start="293" r_stop="303" r_length="11" r_score="0.545"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="28539" i_stop="28293" i_length="247">
            <donor d_prob="0.000" d_score="0.00"/>
            <acceptor a_prob="0.679" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="28292" g_stop="28243" g_length="50"/>
          <reference_exon_boundary r_type="cDNA" r_start="304" r_stop="353" r_length="50" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="-" ref_id="SGN-E306660" ref_strand="+">
        <total_alignment_score>0.974</total_alignment_score>
        <cumulative_length_of_scored_exons>351</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E306660" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29551" e_stop="29380"/>
          <exon e_start="29019" e_stop="28902"/>
          <exon e_start="28550" e_stop="28540"/>
          <exon e_start="28292" e_stop="28243"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAAGAAGCAAAATCAAT-CGATAACT-GGAAAGAAAGCTCTGTGTTGCTATCTTTGAATTAGGGTTCTATATTACGAACCCTAAAATTCCAGTTCGTTCCTAATTCTTGTAGCCATGGACTCTCCCGCTGCAAATCACTTGGATATATTCGATATCTACGGCCGATACTGTGGTATTTTAATCCAGATTCCATTCCTTGTAGTTTTAATTTCGTAATTTTTGTTTCTCCTTATGGATTATCATTAATTTAATACTACTAAATTCCAAACTAGTTGATTTGTCTATATGAATTGAACCGATTCATTCAAGAAATTATGCAAGGCTTCATACTTTTGTTTTTGATCTGGAAGTTACGGTTGTCCCTAGGTCTCCGTGTTTTTATGTGAAGGCGTTGATGTTCTTGTTTTGCATTGATTTAACTTTTTGTAATTTGTTTGAATTTTTTCATTATACATGAACAAGTCAGGTTTATGTAATTAATTGGTGTTTTTTCACTTATGTTGATCTGCTTAGTGATGTATTTGCTTTGCAGATATCATGTCAGGGGCATATGCTACCAGGAACCTAGTAGATGAATTGCAGAAAGCCAGATTTACAAGAGAGGCATTGAACCAGCTTATGAAATTAGTGGATTCAAGTTTGCATATAAGGCATGTATTTGGTAGGACATGGAACTAGCAGCATTTTTGATCTTTTATGTATGTCTGGATTCTAAGAGTCCAAAACTATATCTACAAGAGTTCAAGTTTCCTCTTTCCCCTTGAAACACCAACATGGAACACTTGCAAATGCTTGATCCATATCAAAGAAAAGTTGGGACTTCTGTATGCATAATACCTTTTTAAAATAAAAAATACTTACAGCTATTGCTCTTTCTGTCTTGCAAAGACAAAGGTCTAACGGTTGAACCGTTGAGAGAATAACAGCAACTCAAATTGATTTTCTTGGACGGTTTCTAACAGATTTGTGATTGATTTGAATGTCACTTCTGCTTTGGGTAGGAATATGTGTTGTTTATTACATTGGGAAGCCTGATACATTTGCCAGATGTACTACGTGATTCTCAAGACCAATGCTGAAATCCTTGTTCTGCCGTTACATTTTTATCGGTGCTTTCTGTCTAAATTCTTTTGTGATCGTGTGGCTTACTTGTGTTAGTCTTAGATCACCTTTCGTTACGTTGGGGGGCGGGGGGGGGGGGGGGGGAAGGAATAGATAGAGGTTGCCAATATTGACAAATTTGTTTTCAACCATGGCAGGGCGACTATCTTTGAAGAAGTGTACAAGCTTAAGTTGCGGTTGAATTTGG</genome_strand>
        <mrna_strand>CAAAAGAAGCAAAATCAATACGATAACTCGGAAAGAAAGCTCTGTGTTGCTATCTTTGAATTAGGGTTCTATATTACAAACCCTAAAATTCCAGGTCGATCCTAATTCTTGTAGCCATGGACTCTCCCGCTGCAAATCACTTGGATATATTCGATATCTACGGGCGATACTGTG........................................................................................................................................................................................................................................................................................................................................................................ATATCATGTCAGGGGCATATGCTACCAGGAACCTACTAGATGAATTGCAGAAAGCCAGATTTACAAGAGAGGCATTGAACCAGCTTATGAAATTAGTGGATTCAAGTTTGCATATAAG...............................................................................................................................................................................................................................................................................................................................................................GCATGTATTTG.......................................................................................................................................................................................................................................................GGCGACTATCTTTGAAGAAGTGTACAAGCTTAAGTTGCGGTTGAATTTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E306600" ref_strand="+" ref_description="SGN-E306600 [cLEY-19-A17]">
      <seq>gggacataaaatattactagtatcagaatattccggtaacgtagcagataaattgtgccccaattcaaaagaagcaaaatcaatcgataactggaaagaaagctctgtgttgctatctttgaattagggttctatattactaaccctaaaattccagctcgttcctaattcttgtagccatggactcttccgctgcaaataacttggatatattcgatatctacggccgatactgtgatatcatgtcaggggcatatgctaccacgaacctagtatatgaattgctgaaagccagatttacaagagaggcattgaaccagcttatgaaattagtggattcaagtttgcatataaagcatgtatttgggcgactatctttgaagaagtgtaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="-" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="29916" stop="27967"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29616" g_stop="29380" g_length="237"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="237" r_length="237" r_score="0.975"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29379" i_stop="29020" i_length="360">
            <donor d_prob="0.985" d_score="0.96"/>
            <acceptor a_prob="1.000" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29019" g_stop="28902" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="238" r_stop="355" r_length="118" r_score="0.966"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28901" i_stop="28551" i_length="351">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.693" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="28550" g_stop="28540" g_length="11"/>
          <reference_exon_boundary r_type="cDNA" r_start="356" r_stop="366" r_length="11" r_score="0.545"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="28539" i_stop="28293" i_length="247">
            <donor d_prob="0.000" d_score="0.00"/>
            <acceptor a_prob="0.679" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="28292" g_stop="28267" g_length="26"/>
          <reference_exon_boundary r_type="cDNA" r_start="367" r_stop="392" r_length="26" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="-" ref_id="SGN-E306600" ref_strand="+">
        <total_alignment_score>0.972</total_alignment_score>
        <cumulative_length_of_scored_exons>392</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E306600" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29616" e_stop="29380"/>
          <exon e_start="29019" e_stop="28902"/>
          <exon e_start="28550" e_stop="28540"/>
          <exon e_start="28292" e_stop="28267"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGGACAAAAAATATTACTAGTATCAGAATATTCCGGTAACGTTGCAGATAAATTGTGCCCCAATTCAAAAGAAGCAAAATCAATCGATAACTGGAAAGAAAGCTCTGTGTTGCTATCTTTGAATTAGGGTTCTATATTACGAACCCTAAAATTCCAGTTCGTTCCTAATTCTTGTAGCCATGGACTCTCCCGCTGCAAATCACTTGGATATATTCGATATCTACGGCCGATACTGTGGTATTTTAATCCAGATTCCATTCCTTGTAGTTTTAATTTCGTAATTTTTGTTTCTCCTTATGGATTATCATTAATTTAATACTACTAAATTCCAAACTAGTTGATTTGTCTATATGAATTGAACCGATTCATTCAAGAAATTATGCAAGGCTTCATACTTTTGTTTTTGATCTGGAAGTTACGGTTGTCCCTAGGTCTCCGTGTTTTTATGTGAAGGCGTTGATGTTCTTGTTTTGCATTGATTTAACTTTTTGTAATTTGTTTGAATTTTTTCATTATACATGAACAAGTCAGGTTTATGTAATTAATTGGTGTTTTTTCACTTATGTTGATCTGCTTAGTGATGTATTTGCTTTGCAGATATCATGTCAGGGGCATATGCTACCAGGAACCTAGTAGATGAATTGCAGAAAGCCAGATTTACAAGAGAGGCATTGAACCAGCTTATGAAATTAGTGGATTCAAGTTTGCATATAAGGCATGTATTTGGTAGGACATGGAACTAGCAGCATTTTTGATCTTTTATGTATGTCTGGATTCTAAGAGTCCAAAACTATATCTACAAGAGTTCAAGTTTCCTCTTTCCCCTTGAAACACCAACATGGAACACTTGCAAATGCTTGATCCATATCAAAGAAAAGTTGGGACTTCTGTATGCATAATACCTTTTTAAAATAAAAAATACTTACAGCTATTGCTCTTTCTGTCTTGCAAAGACAAAGGTCTAACGGTTGAACCGTTGAGAGAATAACAGCAACTCAAATTGATTTTCTTGGACGGTTTCTAACAGATTTGTGATTGATTTGAATGTCACTTCTGCTTTGGGTAGGAATATGTGTTGTTTATTACATTGGGAAGCCTGATACATTTGCCAGATGTACTACGTGATTCTCAAGACCAATGCTGAAATCCTTGTTCTGCCGTTACATTTTTATCGGTGCTTTCTGTCTAAATTCTTTTGTGATCGTGTGGCTTACTTGTGTTAGTCTTAGATCACCTTTCGTTACGTTGGGGGGCGGGGGGGGGGGGGGGGGAAGGAATAGATAGAGGTTGCCAATATTGACAAATTTGTTTTCAACCATGGCAGGGCGACTATCTTTGAAGAAGTGTACA</genome_strand>
        <mrna_strand>GGGACATAAAATATTACTAGTATCAGAATATTCCGGTAACGTAGCAGATAAATTGTGCCCCAATTCAAAAGAAGCAAAATCAATCGATAACTGGAAAGAAAGCTCTGTGTTGCTATCTTTGAATTAGGGTTCTATATTACTAACCCTAAAATTCCAGCTCGTTCCTAATTCTTGTAGCCATGGACTCTTCCGCTGCAAATAACTTGGATATATTCGATATCTACGGCCGATACTGTG........................................................................................................................................................................................................................................................................................................................................................................ATATCATGTCAGGGGCATATGCTACCACGAACCTAGTATATGAATTGCTGAAAGCCAGATTTACAAGAGAGGCATTGAACCAGCTTATGAAATTAGTGGATTCAAGTTTGCATATAAA...............................................................................................................................................................................................................................................................................................................................................................GCATGTATTTG.......................................................................................................................................................................................................................................................GGCGACTATCTTTGAAGAAGTGTACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E274219" ref_strand="+" ref_description="SGN-E274219 [cLEN-8-N6]">
      <seq>cacttgggacaaaaaatattactagtatcagaatattccggtaacgttgcagataaattgtgccccaattcaaaagaagcaaaatcaatcgataactggaaagaaagctctgtgttgctatctttgaattagggttctatattacgaaccctaaaattccagttcgttcctaattcttgtagccatggactctcccgctgcaaatcacttggatatattcgatatctacggccgatactgtgatatcatgtcaggggcatatgctaccaggaacctagtagatgaattgcagaaagccagatttacaagagaggcattgaaccagcttatgaaattagtggattcaagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="-" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="29921" stop="28613"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29621" g_stop="29380" g_length="242"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="242" r_length="242" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29379" i_stop="29020" i_length="360">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29019" g_stop="28913" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="243" r_stop="349" r_length="107" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="-" ref_id="SGN-E274219" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>349</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E274219" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29621" e_stop="29380"/>
          <exon e_start="29019" e_stop="28913"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACTTGGGACAAAAAATATTACTAGTATCAGAATATTCCGGTAACGTTGCAGATAAATTGTGCCCCAATTCAAAAGAAGCAAAATCAATCGATAACTGGAAAGAAAGCTCTGTGTTGCTATCTTTGAATTAGGGTTCTATATTACGAACCCTAAAATTCCAGTTCGTTCCTAATTCTTGTAGCCATGGACTCTCCCGCTGCAAATCACTTGGATATATTCGATATCTACGGCCGATACTGTGGTATTTTAATCCAGATTCCATTCCTTGTAGTTTTAATTTCGTAATTTTTGTTTCTCCTTATGGATTATCATTAATTTAATACTACTAAATTCCAAACTAGTTGATTTGTCTATATGAATTGAACCGATTCATTCAAGAAATTATGCAAGGCTTCATACTTTTGTTTTTGATCTGGAAGTTACGGTTGTCCCTAGGTCTCCGTGTTTTTATGTGAAGGCGTTGATGTTCTTGTTTTGCATTGATTTAACTTTTTGTAATTTGTTTGAATTTTTTCATTATACATGAACAAGTCAGGTTTATGTAATTAATTGGTGTTTTTTCACTTATGTTGATCTGCTTAGTGATGTATTTGCTTTGCAGATATCATGTCAGGGGCATATGCTACCAGGAACCTAGTAGATGAATTGCAGAAAGCCAGATTTACAAGAGAGGCATTGAACCAGCTTATGAAATTAGTGGATTCAAGT</genome_strand>
        <mrna_strand>CACTTGGGACAAAAAATATTACTAGTATCAGAATATTCCGGTAACGTTGCAGATAAATTGTGCCCCAATTCAAAAGAAGCAAAATCAATCGATAACTGGAAAGAAAGCTCTGTGTTGCTATCTTTGAATTAGGGTTCTATATTACGAACCCTAAAATTCCAGTTCGTTCCTAATTCTTGTAGCCATGGACTCTCCCGCTGCAAATCACTTGGATATATTCGATATCTACGGCCGATACTGTG........................................................................................................................................................................................................................................................................................................................................................................ATATCATGTCAGGGGCATATGCTACCAGGAACCTAGTAGATGAATTGCAGAAAGCCAGATTTACAAGAGAGGCATTGAACCAGCTTATGAAATTAGTGGATTCAAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E550240" ref_strand="+" ref_description="SGN-E550240 [TUS-5-N18](-)">
      <seq>aaatatattctctctcatatttatcttttcaaattgttaattctctctcccatttaattttttctctctcttatggttatcttttctgattttcctccaacattcaagttgcaaattttttttgccatatattttcgttgtttttttaatccaaaattgaatcaacaagaatccctttgattaaggtatctctagtctttatcctattttcagatttcttttctaattttatttttgtttaaatcttaaaaaaatgttgtttgtatttttcaatttccgttatgatttactctccaatgactgaatccaagagacttactagaggtattcatcttaatcaaccaatttctggtgatttttcatcctttaatttatttattacttaacaaatagtgtataatgtatgatccgctgctaaaatgagggaagaaagagggtaagaacatttacaagactcattggtgtgcaaaaccttcctcaaattcagaacgcaaatgtaaaatctttgtctactcgtgaggatcttgaaaaagacgacgaagatcgcgaacaattttctattagtttgttttgtatttataggattttttagaattt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="+" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="34217" stop="35398"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34516" g_stop="35114" g_length="599"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="597" r_length="597" r_score="0.970"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="+" ref_id="SGN-E550240" ref_strand="+">
        <total_alignment_score>0.970</total_alignment_score>
        <cumulative_length_of_scored_exons>599</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E550240" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34516" e_stop="35114"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAATTATTCTCTCTCATATTTATATTTTCAAATTGTTAATTCTCTCTCCCATTTCATTTTTTTTCTCTCTTATGGTTATCTTTTCTGATTTTCCTCCAACATTCAAGTTGCAAATATTTTTTTGTCATATATTTTGGTTGTTTTTTTAATCCAAAATTGAATCAACAAGAATCCCTTTGATTAAGGTATCTCTAATCTTTATCCTATTTTCATATTTCTTTTCTAATTTTATTTTTGTTTAAATCTTAAAAAAATGTTGTTTGTATTTTTCAATTTCCGTTATGATTTAATCTCTAATGACTGAATCCAAGAGGCTTACTAGAGGTATTCATCTTAATCAACCAATTTCTGGTGATTTTTCATCCTTTAATTTATTTATTACTTAACAAATAGTGTATAATGTATGATCCGCTGCTAAAATGAGGGAAGAAAGAGGGTAAGAACATTTACAAGACTCATTGGTGTGCAAAATCTTCCTCAAATTCAGAACGCAAATGTAAAATCTTTGTCTGCTCGTGAGGATCTTGAAAAAGACGACGAAGATCGCGAACAATTTTCTATTAGTTTGTTTTGTATTTATAGTTCTTTTTTAGAATTT</genome_strand>
        <mrna_strand>AAATATATTCTCTCTCATATTTATCTTTTCAAATTGTTAATTCTCTCTCCCATTTAATTTTTTCTCTCTCTTATGGTTATCTTTTCTGATTTTCCTCCAACATTCAAGTTGCAAAT-TTTTTTTGCCATATATTTTCGTTGTTTTTTTAATCCAAAATTGAATCAACAAGAATCCCTTTGATTAAGGTATCTCTAGTCTTTATCCTATTTTCAGATTTCTTTTCTAATTTTATTTTTGTTTAAATCTTAAAAAAATGTTGTTTGTATTTTTCAATTTCCGTTATGATTTACTCTCCAATGACTGAATCCAAGAGACTTACTAGAGGTATTCATCTTAATCAACCAATTTCTGGTGATTTTTCATCCTTTAATTTATTTATTACTTAACAAATAGTGTATAATGTATGATCCGCTGCTAAAATGAGGGAAGAAAGAGGGTAAGAACATTTACAAGACTCATTGGTGTGCAAAACCTTCCTCAAATTCAGAACGCAAATGTAAAATCTTTGTCTACTCGTGAGGATCTTGAAAAAGACGACGAAGATCGCGAACAATTTTCTATTAGTTTGTTTTGTATTTATAG-GATTTTTTAGAATTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E389671" ref_strand="+" ref_description="SGN-E389671 [TUS-4-N18](-)">
      <seq>tttcaaattgttaattctctctcccatttaattttttctctctcttatggttatcttttctgattttcctccaacattcaagttgcaaattttttttgccatatattttcgttgtttttttaatccaaaattgaatcaacaagaatccctttgattaaggtatctctagtctttatcctattttcagatttcttttctaattttatttttgtttaaatcttaaaaaaatgttgtttgtatttttcaatttccgttatgatttactctccaatgactgaatccaagagacttactagaggtattcatcttaatcaaccaatttctggtgatttttcatcctttaatttatttattacttaacaaatagtgtataatgtatgatccgctgctaaaatgagggaagaaagagggtaagaacatttacaagactcattggtgtgcaaaaccttcctcaaattcagaacgcaaatgtaaaatctttgtctactcgtgaggatgttgaaaaagacgacgaagatcgcgaacaattttctattagtttgttttgtattta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="+" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="34242" stop="35395"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34542" g_stop="35095" g_length="554"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="553" r_length="553" r_score="0.977"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="+" ref_id="SGN-E389671" ref_strand="+">
        <total_alignment_score>0.977</total_alignment_score>
        <cumulative_length_of_scored_exons>554</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E389671" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34542" e_stop="35095"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCAAATTGTTAATTCTCTCTCCCATTTCATTTTTTTTCTCTCTTATGGTTATCTTTTCTGATTTTCCTCCAACATTCAAGTTGCAAATATTTTTTTGTCATATATTTTGGTTGTTTTTTTAATCCAAAATTGAATCAACAAGAATCCCTTTGATTAAGGTATCTCTAATCTTTATCCTATTTTCATATTTCTTTTCTAATTTTATTTTTGTTTAAATCTTAAAAAAATGTTGTTTGTATTTTTCAATTTCCGTTATGATTTAATCTCTAATGACTGAATCCAAGAGGCTTACTAGAGGTATTCATCTTAATCAACCAATTTCTGGTGATTTTTCATCCTTTAATTTATTTATTACTTAACAAATAGTGTATAATGTATGATCCGCTGCTAAAATGAGGGAAGAAAGAGGGTAAGAACATTTACAAGACTCATTGGTGTGCAAAATCTTCCTCAAATTCAGAACGCAAATGTAAAATCTTTGTCTGCTCGTGAGGATCTTGAAAAAGACGACGAAGATCGCGAACAATTTTCTATTAGTTTGTTTTGTATTTA</genome_strand>
        <mrna_strand>TTTCAAATTGTTAATTCTCTCTCCCATTTAATTTTTTCTCTCTCTTATGGTTATCTTTTCTGATTTTCCTCCAACATTCAAGTTGCAAAT-TTTTTTTGCCATATATTTTCGTTGTTTTTTTAATCCAAAATTGAATCAACAAGAATCCCTTTGATTAAGGTATCTCTAGTCTTTATCCTATTTTCAGATTTCTTTTCTAATTTTATTTTTGTTTAAATCTTAAAAAAATGTTGTTTGTATTTTTCAATTTCCGTTATGATTTACTCTCCAATGACTGAATCCAAGAGACTTACTAGAGGTATTCATCTTAATCAACCAATTTCTGGTGATTTTTCATCCTTTAATTTATTTATTACTTAACAAATAGTGTATAATGTATGATCCGCTGCTAAAATGAGGGAAGAAAGAGGGTAAGAACATTTACAAGACTCATTGGTGTGCAAAACCTTCCTCAAATTCAGAACGCAAATGTAAAATCTTTGTCTACTCGTGAGGATGTTGAAAAAGACGACGAAGATCGCGAACAATTTTCTATTAGTTTGTTTTGTATTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E223449" ref_strand="+" ref_description="SGN-E223449 [cLEL-14-I9](-)">
      <seq>tcaagggaagataggtgcaagcacaggtggacgctaaagctacaggttcgttgttgcagctatccggacatcagtattcatccggagtttggtaggtcctcatgctttcgaggatgctaccgttttacattctagcgtagttttagagttgagctagcggagcatgttccactagcgtttctttcctgttttggttcaaactttgtattggcgctattttggccgatatacaagtaatacttaatgaattatttctttcagttgcttaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="+" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="43422" stop="66094"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="43725" g_stop="43975" g_length="251"/>
          <reference_exon_boundary r_type="cDNA" r_start="15" r_stop="265" r_length="251" r_score="0.976"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="43976" i_stop="44553" i_length="578">
            <donor d_prob="0.000" d_score="0.98"/>
            <acceptor a_prob="0.869" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="44554" g_stop="44577" g_length="24"/>
          <reference_exon_boundary r_type="cDNA" r_start="266" r_stop="289" r_length="24" r_score="0.708"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="+" ref_id="SGN-E223449" ref_strand="+">
        <total_alignment_score>0.976</total_alignment_score>
        <cumulative_length_of_scored_exons>275</cumulative_length_of_scored_exons>
        <coverage percentage="0.952" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E223449" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="43725" e_stop="43975"/>
          <exon e_start="44554" e_stop="44577"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGCAGGCACAGGTGGACGCTAGAGCTACAGGTTCGTTGTTGCAGCTATCCGGACATCAGTATTCATCCGGAGTTTGGTAGGTCCTCATGCTTTCGAGGATGCTACTGTTTTACATTCTAGCGTAGTTTTAGAGTTGAGCTAGCGGAACATGTTCCACTAGCGTTTCTTTCCTGTTTTGGTTCAAACTTTGTATTGGTGCTATTTTGGCCGATATACAATTAATACTTAATGAATTATTTCTTTCAGTTGCTTATCTCTTAAATGTTAGATGGTTGATGATGAACGATTACGAAATGTTAAGAATGTTCAGCAAGTATGATTAAAGAATCAAAAATTTCAAATTTTCCGCTAAAATTAATCTATGTAAAGTAAGAATGACGTAAGCAGGCTTGTCTGCGACCTCTGAGAGGTCAACGACGCCGGTCTCGTCTGGGGTCTAGATTCCGGTCGTGACATCAGTTACACAAAAAACTGAAAAAAAGACTAAACAATTGAGCAAAACTTCCCATTACGAGAACATCAATAGCAACTACATACCCGGTGCAATCCCACAAATGGGGTATGGGAAGGGTAGGATATACGCAAACCCTATCTTTATGGAGCAGAGAGGCTGTTTCCAATTGTCCATTGGCTCAGAACATCAATTATGAACATGGAAAATGTTTTCATTCCTAACTGTAGCAGTGGAAGGACCTAGGGAATTCAAGCAACTTCAATACATGATCCTCTAATATGAAAATTCTTTATACAGCTCGAGAAAGTACTACACAGTGAAGTCTGATTGCTGAACATGTGACTATTCCTTTGAACCTAATTTGCACAATGCAGTCATAAAACTAAAGAAAATAACAA</genome_strand>
        <mrna_strand>GTGCAAGCACAGGTGGACGCTAAAGCTACAGGTTCGTTGTTGCAGCTATCCGGACATCAGTATTCATCCGGAGTTTGGTAGGTCCTCATGCTTTCGAGGATGCTACCGTTTTACATTCTAGCGTAGTTTTAGAGTTGAGCTAGCGGAGCATGTTCCACTAGCGTTTCTTTCCTGTTTTGGTTCAAACTTTGTATTGGCGCTATTTTGGCCGATATACAAGTAATACTTAATGAATTATTTCTTTCAGTTGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAAAAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E614356" ref_strand="+" ref_description="SGN-E614356 [64141]">
      <seq>cattgatgtagtgattttgattgccgtggttggtgcttctggggttttgttgtatccttatataaatcttgtggtgcatatactgattgaatttttcgaagaagtttctgatgtggtgaaagaggaatttttgcgggctccgatggtgtttatctgtctagggcttagcattttttttgctgtaattgctcttttggcagtgacagtttgtacaacagggagaggatgtgggagaccaggttgtcgtcggcttaagaaagctgctgaatttgatatacagctagagacagaagacagtcttaagaagtcaaatttgattccaaaaactggaggagttaaaaaggggatattcaagttacctagagattaccatcaagaattggaaggtgaacttaaaagaatggctccgcctaatggtagagcggttcttgtgtatcgaggcagatgtggttgctctataggtacaatggaaattcctggaccaaggaagactggaaagtttaagaaataattttaggaagcatattttggatgctgtaataatcagatgatgcctttgactggtaatcttctctgaaaagaactagaaccttttataagcttatatatatatgagtataaattattacaaagaacaggaactcttattataatgtaacaggggaatctgccatttccgntaccataatcagtgtattccatcgatccccgttcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="-" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="45792" stop="44474"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="45492" g_stop="44785" g_length="708"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="690" r_length="690" r_score="0.941"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="-" ref_id="SGN-E614356" ref_strand="+">
        <total_alignment_score>0.941</total_alignment_score>
        <cumulative_length_of_scored_exons>708</cumulative_length_of_scored_exons>
        <coverage percentage="0.990" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E614356" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="45492" e_stop="44785"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATTGATGTAGTGATTTTCATTGCCGTGGTTGGTGCTTCTGGGGTTTTGTTGTATCCTTACATAAATCTTGTGGTGCATATACTGATTGAATTTTTCGAAGAAGTTTCTGATGTGGTGAAAGAGGAATTTTTGCGCGCTCCGATGGTGTTTATCTGTCTAGGGCTTAGCATTTTTTTTGCTGTGATTGCTCTTTTGGCAGTGACTATTTGTACAACAGGGAGAGGATGTGGGAGACCAGGTTGTCGTCGGCTTAAGAAAGCTGCTGAATTTGATATACAGCTAGAGACAGAAGACAGTCTTAAGAAGTCAAATTTGACTCCTCCTAAAATTGGAGGAGTTAAAAAGGGGATATTCAAGTTACCTAGAGATTACCATCAAGAATTGGAAGGTGAGCTTAAGAGAATGGCTCCGCCTAATGGTAGAGCCATTCTTGTGTATCGAGGCAGATGTGGTTGCTCTATAGGTACAATGGAAATTCCTGGACCAAGGAAGACTGGAAAGTTTAAGAAATAATTATAGGAAGCATATTTTGGATGCTGTAATAATCAGATGATGCCTTTGGCTGGTAATCTTCTCTGAAAAGTACTAGACCCTTTTATAAGCTTTTATATATATATATATATATATATATATATATATATATTACAAAGAACAGGAACCCTTATTATAATGTAGCAGGGGAATCTGCCATTTTGGCTACCATAATA</genome_strand>
        <mrna_strand>CATTGATGTAGTGATTTTGATTGCCGTGGTTGGTGCTTCTGGGGTTTTGTTGTATCCTTATATAAATCTTGTGGTGCATATACTGATTGAATTTTTCGAAGAAGTTTCTGATGTGGTGAAAGAGGAATTTTTGCGGGCTCCGATGGTGTTTATCTGTCTAGGGCTTAGCATTTTTTTTGCTGTAATTGCTCTTTTGGCAGTGACAGTTTGTACAACAGGGAGAGGATGTGGGAGACCAGGTTGTCGTCGGCTTAAGAAAGCTGCTGAATTTGATATACAGCTAGAGACAGAAGACAGTCTTAAGAAGTCAAATTTGA-T--TCCAAAAACTGGAGGAGTTAAAAAGGGGATATTCAAGTTACCTAGAGATTACCATCAAGAATTGGAAGGTGAACTTAAAAGAATGGCTCCGCCTAATGGTAGAGCGGTTCTTGTGTATCGAGGCAGATGTGGTTGCTCTATAGGTACAATGGAAATTCCTGGACCAAGGAAGACTGGAAAGTTTAAGAAATAATTTTAGGAAGCATATTTTGGATGCTGTAATAATCAGATGATGCCTTTGACTGGTAATCTTCTCTGAAAAGAACTAGAACCTTTTATAAGC---------T-TATATATATAT-GA-GTATA-A-AT-TATTACAAAGAACAGGAACTCTTATTATAATGTAACAGGGGAATCTGCCATTTCCGNTACCATAATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E407615" ref_strand="+" ref_description="SGN-E407615 [PPI-7-N6]">
      <seq>gtggaactatgaggaatgtgcctgtaggtgctggtcgtcggaaacacaagaactcggttttgcattacagtcacatatccgtctctgaagcactatcaaatgcaagaacaaattttcctaatgaaacccagcaacctcccttcaagctcaatggaactattctgacatttgatactgaagaccccctatctgagtcaatggtttcagttttgaacgttgctgataaaactatgcacaattgttctgggaatgggttccaaaaatataaagagcttcgaattcaagctggagataatggagatgatcattccgatggatcttcgggtacagctgtaagttcaaaggataatgataatggattacctaacactccaaggaagaactacaacagctttccaactcatttaccttgctttactgaagctccttggccatatatatggagttctgtgcactgtagaaatgcaggacctccaccgggttactcccttgctggcattcctatgccgatcttccctgcaaccacttattggggcttgacaatagcaggttcttggaatgtgccttggatgttcccacccactggatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="+" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="54190" stop="55378"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54490" g_stop="55078" g_length="589"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="589" r_length="589" r_score="0.929"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="+" ref_id="SGN-E407615" ref_strand="+">
        <total_alignment_score>0.929</total_alignment_score>
        <cumulative_length_of_scored_exons>589</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E407615" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54490" e_stop="55078"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGGGACTATGAGGAATGTGCCTGTAGGTGCTGGTCGTCGGAAACACAAGAACTCGGTTTTGCATTATAGTCACGTATCCGTCTCTGAAGCACTATCAAATGTAAGAACAAATTTTCCTACTGAAACCCAGCATCCTCCCCTCACGCTCAATGGAACAATTCTGTCATTTGATACTGACAAACCCGTATCTGAGTCGATGGTTTCAGTTTTGAACGTTGCTGATAAAGGTATGCAAAATTGTTCTGGGAATGGGTTTCAAAAATATAAAGAGCTTCGAATTCAAGCTGGAGATAATGGAGATGATCATTCCGATGGATCTTCGGTTACTGCTATAAGTTCAAAGGATAGTGATAATGGATTACCTAACACTCCAAGGAAGAACTACAACAGCTTTCCAACTCATTTACCTTGCTTTACTGGAGCTCCTTGGCCATACATATGGAGTTCTGTGCACTGTAGAAATGCAGTACCTCCACCTGGTTACTCCCTTCCCGGCATTCCTATGTCTTTCATCCCTGCAACCACTTATTGGGGTTGTACAATACCAGGCTCTTGGAATGTCCCTTGGATGTCCCCACCCACTGCTTC</genome_strand>
        <mrna_strand>GTGGAACTATGAGGAATGTGCCTGTAGGTGCTGGTCGTCGGAAACACAAGAACTCGGTTTTGCATTACAGTCACATATCCGTCTCTGAAGCACTATCAAATGCAAGAACAAATTTTCCTAATGAAACCCAGCAACCTCCCTTCAAGCTCAATGGAACTATTCTGACATTTGATACTGAAGACCCCCTATCTGAGTCAATGGTTTCAGTTTTGAACGTTGCTGATAAAACTATGCACAATTGTTCTGGGAATGGGTTCCAAAAATATAAAGAGCTTCGAATTCAAGCTGGAGATAATGGAGATGATCATTCCGATGGATCTTCGGGTACAGCTGTAAGTTCAAAGGATAATGATAATGGATTACCTAACACTCCAAGGAAGAACTACAACAGCTTTCCAACTCATTTACCTTGCTTTACTGAAGCTCCTTGGCCATATATATGGAGTTCTGTGCACTGTAGAAATGCAGGACCTCCACCGGGTTACTCCCTTGCTGGCATTCCTATGCCGATCTTCCCTGCAACCACTTATTGGGGCTTGACAATAGCAGGTTCTTGGAATGTGCCTTGGATGTTCCCACCCACTGGATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E405666" ref_strand="+" ref_description="SGN-E405666 [PPI-1-A20]">
      <seq>gtggaactatgaggaatgtgcctgtaggtgctggtcgccggaagcacaagaactctgataagcattacagtcacatatccgtctctgaagcactatcaaatgcaagaacaaattttcctaatgaaacccagcaacctgccttcaagctcaatggaactattctgacatttgatactgaagaccccctatctgagtcaatggtttcagttttgaacgttgctgataaaactatgcagaattgttctgggaatgggttccaaaaatataaagagcttcaaattcaagctggagataatggagatgatcattccgatggatctgatgctacagctgtaagttcaaaggataatgataatggattacctaacactccaaggaagaactacaacagctatgcaactcatttaccttgctttactgaagctccttggccatatatatggagttctgcgcactgtaaaaatgcagtacctacaccgggttactcccttgctggcattcctatgccggtcttccctgcaaccac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="+" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="54190" stop="55315"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54490" g_stop="55015" g_length="526"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="526" r_length="526" r_score="0.909"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="+" ref_id="SGN-E405666" ref_strand="+">
        <total_alignment_score>0.909</total_alignment_score>
        <cumulative_length_of_scored_exons>526</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E405666" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54490" e_stop="55015"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGGGACTATGAGGAATGTGCCTGTAGGTGCTGGTCGTCGGAAACACAAGAACTCGGTTTTGCATTATAGTCACGTATCCGTCTCTGAAGCACTATCAAATGTAAGAACAAATTTTCCTACTGAAACCCAGCATCCTCCCCTCACGCTCAATGGAACAATTCTGTCATTTGATACTGACAAACCCGTATCTGAGTCGATGGTTTCAGTTTTGAACGTTGCTGATAAAGGTATGCAAAATTGTTCTGGGAATGGGTTTCAAAAATATAAAGAGCTTCGAATTCAAGCTGGAGATAATGGAGATGATCATTCCGATGGATCTTCGGTTACTGCTATAAGTTCAAAGGATAGTGATAATGGATTACCTAACACTCCAAGGAAGAACTACAACAGCTTTCCAACTCATTTACCTTGCTTTACTGGAGCTCCTTGGCCATACATATGGAGTTCTGTGCACTGTAGAAATGCAGTACCTCCACCTGGTTACTCCCTTCCCGGCATTCCTATGTCTTTCATCCCTGCAACCAC</genome_strand>
        <mrna_strand>GTGGAACTATGAGGAATGTGCCTGTAGGTGCTGGTCGCCGGAAGCACAAGAACTCTGATAAGCATTACAGTCACATATCCGTCTCTGAAGCACTATCAAATGCAAGAACAAATTTTCCTAATGAAACCCAGCAACCTGCCTTCAAGCTCAATGGAACTATTCTGACATTTGATACTGAAGACCCCCTATCTGAGTCAATGGTTTCAGTTTTGAACGTTGCTGATAAAACTATGCAGAATTGTTCTGGGAATGGGTTCCAAAAATATAAAGAGCTTCAAATTCAAGCTGGAGATAATGGAGATGATCATTCCGATGGATCTGATGCTACAGCTGTAAGTTCAAAGGATAATGATAATGGATTACCTAACACTCCAAGGAAGAACTACAACAGCTATGCAACTCATTTACCTTGCTTTACTGAAGCTCCTTGGCCATATATATGGAGTTCTGCGCACTGTAAAAATGCAGTACCTACACCGGGTTACTCCCTTGCTGGCATTCCTATGCCGGTCTTCCCTGCAACCAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E405665" ref_strand="+" ref_description="SGN-E405665 [PPI-1-A18]">
      <seq>gtggaactatgaggaatgtgcctgtaggtgctggtcgtcggaaaacaagaactcggttttgcattacagtcacatatccgtctctgaagcactatcaaatgcaagaacaaattttcctaatgaaacccagcaacctcccttcaagctcaatggaactattctgacatttgatactgaagaccccctatctgagtcaatggtttcagttttgaacgttgctgataaaactatgcagaattgttctgggaatgggttccaaaaatataaagagcttcgaattcaagctggagataatggagatgatcattccgatggatcttcggttacagctgtaagttcaaaggataatgataatggattacctaacactccaaggaagaactacaacagctttccaactcatttaccttgctttactgaagctccttggccatatatatggagttctgtgcactgtagaaatgcagtacctccaccgggttactcccttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="+" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="54190" stop="55281"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54490" g_stop="54981" g_length="492"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="491" r_length="491" r_score="0.947"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="+" ref_id="SGN-E405665" ref_strand="+">
        <total_alignment_score>0.947</total_alignment_score>
        <cumulative_length_of_scored_exons>492</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E405665" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54490" e_stop="54981"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGGGACTATGAGGAATGTGCCTGTAGGTGCTGGTCGTCGGAAACACAAGAACTCGGTTTTGCATTATAGTCACGTATCCGTCTCTGAAGCACTATCAAATGTAAGAACAAATTTTCCTACTGAAACCCAGCATCCTCCCCTCACGCTCAATGGAACAATTCTGTCATTTGATACTGACAAACCCGTATCTGAGTCGATGGTTTCAGTTTTGAACGTTGCTGATAAAGGTATGCAAAATTGTTCTGGGAATGGGTTTCAAAAATATAAAGAGCTTCGAATTCAAGCTGGAGATAATGGAGATGATCATTCCGATGGATCTTCGGTTACTGCTATAAGTTCAAAGGATAGTGATAATGGATTACCTAACACTCCAAGGAAGAACTACAACAGCTTTCCAACTCATTTACCTTGCTTTACTGGAGCTCCTTGGCCATACATATGGAGTTCTGTGCACTGTAGAAATGCAGTACCTCCACCTGGTTACTCCCTTC</genome_strand>
        <mrna_strand>GTGGAACTATGAGGAATGTGCCTGTAGGTGCTGGTCGTCGGAAA-ACAAGAACTCGGTTTTGCATTACAGTCACATATCCGTCTCTGAAGCACTATCAAATGCAAGAACAAATTTTCCTAATGAAACCCAGCAACCTCCCTTCAAGCTCAATGGAACTATTCTGACATTTGATACTGAAGACCCCCTATCTGAGTCAATGGTTTCAGTTTTGAACGTTGCTGATAAAACTATGCAGAATTGTTCTGGGAATGGGTTCCAAAAATATAAAGAGCTTCGAATTCAAGCTGGAGATAATGGAGATGATCATTCCGATGGATCTTCGGTTACAGCTGTAAGTTCAAAGGATAATGATAATGGATTACCTAACACTCCAAGGAAGAACTACAACAGCTTTCCAACTCATTTACCTTGCTTTACTGAAGCTCCTTGGCCATATATATGGAGTTCTGTGCACTGTAGAAATGCAGTACCTCCACCGGGTTACTCCCTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E243435" ref_strand="+" ref_description="SGN-E243435 [cLED-34-E10]">
      <seq>aaatactttaactctgtttttttctgcatgcaacagtatcacccgccttttacaacaacaaagagatatttctcttcttctccatctcaatcaagaactttaattttaatatggcagcttctaattatttgaatcgatttccattcaagaaattccctgtaactactattccagttcccttgctaattcatggggcggtgggattcttctttctgtatataatctttgattgtgcacgaagactttttacctttttgtcctttgctgaaacccaagtgtgtgaaaaacacgacactcccaaaaaactgagcgagaaattagttgatggaagcttaaacagggaagaggtggaaatgggtatggctaatttaggtattttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="+" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="64117" stop="65096"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64417" g_stop="64796" g_length="380"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="380" r_length="380" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="+" ref_id="SGN-E243435" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>380</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E243435" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64417" e_stop="64796"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAATACTTTAACTCTGTTTTTTTCTGCATGCAACAGTATCACCCGCCTTTTACAACAACAAAGAGATATTTCTCTTCTTCTCCATCTCAATCAAGAACTTTAATTTTAATATGGCAGCTTCTAATTATTTGAATCGATTTCCATTCAAGAAATTCCCTGTAACTACTATTCCAGTTCCCTTGCTAATTCATGGGGCGGTGGGATTCTTCTTTCTGTATATAATCTTTGATTGTGCACGAAGACTTTTTACCTTTTTGTCCTTTGCTGAAACCCAAGTGTGTGAAAAACACGACACTCCCAAAAAACTGAGCGAGAAATTAGTTGATGGAAGCTTAAACAGGGAAGAGGTGGAAATGGTTATGGCTAATTTAGGTATTTTT</genome_strand>
        <mrna_strand>AAATACTTTAACTCTGTTTTTTTCTGCATGCAACAGTATCACCCGCCTTTTACAACAACAAAGAGATATTTCTCTTCTTCTCCATCTCAATCAAGAACTTTAATTTTAATATGGCAGCTTCTAATTATTTGAATCGATTTCCATTCAAGAAATTCCCTGTAACTACTATTCCAGTTCCCTTGCTAATTCATGGGGCGGTGGGATTCTTCTTTCTGTATATAATCTTTGATTGTGCACGAAGACTTTTTACCTTTTTGTCCTTTGCTGAAACCCAAGTGTGTGAAAAACACGACACTCCCAAAAAACTGAGCGAGAAATTAGTTGATGGAAGCTTAAACAGGGAAGAGGTGGAAATGGGTATGGCTAATTTAGGTATTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E212562" ref_strand="+" ref_description="SGN-E212562 [cLEC-74-H15]">
      <seq>tttaactctgtttttttctgcatgcaacagtatcacccgccttttacaacaacaaagagatatttctcttcttctccatctcaatcaagaactttaattttaatatggcagcttctaattatttgaatcgatttccattcaagaaattccctgtaactactattccagttcccttgctaattcatggggcggtgggattcttctttctgtatataatctttgattgtgcacgaagactttttacctttttgtcctttgctgaaacccaagtgtgtgaaaaacacgacactcccaaaaaactgagcgagaaattagttgatggaagcttaaacagggaagaggtggaaatggttatggctaatttaggtatttttgccaatcctgaaggtgtgaagattcaggagaggttggacatttttgaacttttcggagaggaattagaagctaaagagcaagaagtaagagaagcttttgatgtgtttgacgagaacaaagatggatttattgatgaaagggatttgcagagagttctgtgtgctctgggattaaagggtgttgcagaattggataattgcaagaagatgatcatggcctttgatgaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="+" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="64123" stop="65325"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64423" g_stop="65025" g_length="603"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="603" r_length="603" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="+" ref_id="SGN-E212562" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>603</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E212562" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64423" e_stop="65025"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTAACTCTGTTTTTTTCTGCATGCAACAGTATCACCCGCCTTTTACAACAACAAAGAGATATTTCTCTTCTTCTCCATCTCAATCAAGAACTTTAATTTTAATATGGCAGCTTCTAATTATTTGAATCGATTTCCATTCAAGAAATTCCCTGTAACTACTATTCCAGTTCCCTTGCTAATTCATGGGGCGGTGGGATTCTTCTTTCTGTATATAATCTTTGATTGTGCACGAAGACTTTTTACCTTTTTGTCCTTTGCTGAAACCCAAGTGTGTGAAAAACACGACACTCCCAAAAAACTGAGCGAGAAATTAGTTGATGGAAGCTTAAACAGGGAAGAGGTGGAAATGGTTATGGCTAATTTAGGTATTTTTGCCAATCCTGAAGGTGTGAAGATTCAGGAGAGGTTGGACATTTTTGAACTTTTCGGAGAGGAATTAGAAGCTAAAGAGCAAGAAGTAAGAGAAGCTTTTGATGTGTTTGACGAGAACAAAGATGGATTTATTGATGAAAGGGATTTGCAGAGAGTTCTGTGTGCTCTGGGATTAAAGGGTGTTGCAGAATTGGATAATTGCAAGAAGATGATCATGGCCTTTGATGAAA</genome_strand>
        <mrna_strand>TTTAACTCTGTTTTTTTCTGCATGCAACAGTATCACCCGCCTTTTACAACAACAAAGAGATATTTCTCTTCTTCTCCATCTCAATCAAGAACTTTAATTTTAATATGGCAGCTTCTAATTATTTGAATCGATTTCCATTCAAGAAATTCCCTGTAACTACTATTCCAGTTCCCTTGCTAATTCATGGGGCGGTGGGATTCTTCTTTCTGTATATAATCTTTGATTGTGCACGAAGACTTTTTACCTTTTTGTCCTTTGCTGAAACCCAAGTGTGTGAAAAACACGACACTCCCAAAAAACTGAGCGAGAAATTAGTTGATGGAAGCTTAAACAGGGAAGAGGTGGAAATGGTTATGGCTAATTTAGGTATTTTTGCCAATCCTGAAGGTGTGAAGATTCAGGAGAGGTTGGACATTTTTGAACTTTTCGGAGAGGAATTAGAAGCTAAAGAGCAAGAAGTAAGAGAAGCTTTTGATGTGTTTGACGAGAACAAAGATGGATTTATTGATGAAAGGGATTTGCAGAGAGTTCTGTGTGCTCTGGGATTAAAGGGTGTTGCAGAATTGGATAATTGCAAGAAGATGATCATGGCCTTTGATGAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E368408" ref_strand="+" ref_description="SGN-E368408 [TUS-23-B7](-)">
      <seq>ccatctcaatcaagaactttaattttaatatggcagcttctaattatttgaatcgatttccattcaagaaattccctgtaactactattccagttcccttgctaattcatggggcggtgggattcttctttctgtatataatctttgattgtgcacgaagactttttacctttttgtcctttgctgaaacccaagtgtgtgaaaaacacgacactcccaaaaaactgagcgagaaattagttgatgaaagcttaaacagggaagaggtggaaatggttatggctaatttaggtatttttgccaatcctgaaggtgtgaagattcaggaaaggttggacatttttgaacttttcggagaggaattagaagctaaagagcaagaagtaagagaagcttttgatgtgtttgacgagaacaaagatggatttattgatgaaagggatttgcagagagttctgtgtgctctgggattaaagggtgttgcagaattggataattgcaagaagatgatcatggcctttgatgaaaatggagatggaagaatcgatttccaggaatttgtcaaaatgttgtaacaacaatcaacacaaacattttgtaacattctttaatttgttccatttactctaatttttaaatatcttttatacttatttataatttttatcttttaatataattatttcatgtttgaaaattagaattcttatgatctaataaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="+" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="64198" stop="65524"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64498" g_stop="65229" g_length="732"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="732" r_length="732" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="+" ref_id="SGN-E368408" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>732</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E368408" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64498" e_stop="65229"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCATCTCAATCAAGAACTTTAATTTTAATATGGCAGCTTCTAATTATTTGAATCGATTTCCATTCAAGAAATTCCCTGTAACTACTATTCCAGTTCCCTTGCTAATTCATGGGGCGGTGGGATTCTTCTTTCTGTATATAATCTTTGATTGTGCACGAAGACTTTTTACCTTTTTGTCCTTTGCTGAAACCCAAGTGTGTGAAAAACACGACACTCCCAAAAAACTGAGCGAGAAATTAGTTGATGGAAGCTTAAACAGGGAAGAGGTGGAAATGGTTATGGCTAATTTAGGTATTTTTGCCAATCCTGAAGGTGTGAAGATTCAGGAGAGGTTGGACATTTTTGAACTTTTCGGAGAGGAATTAGAAGCTAAAGAGCAAGAAGTAAGAGAAGCTTTTGATGTGTTTGACGAGAACAAAGATGGATTTATTGATGAAAGGGATTTGCAGAGAGTTCTGTGTGCTCTGGGATTAAAGGGTGTTGCAGAATTGGATAATTGCAAGAAGATGATCATGGCCTTTGATGAAAATGGAGATGGAAGAATCGATTTCCAGGAATTTGTCAAAATGTTGTAACAACAATCAACACAAACATTTTGTAACATTCTTTAATTTGTTCCATTTACTCTAATTTTTAAATATCTTTTATACTTATTTATAATTTTTATCTTTTAATATAATTATTTCATGTTTGAAAATTAGAATTCTTATGATCTAATAAAATTATAGTCTA</genome_strand>
        <mrna_strand>CCATCTCAATCAAGAACTTTAATTTTAATATGGCAGCTTCTAATTATTTGAATCGATTTCCATTCAAGAAATTCCCTGTAACTACTATTCCAGTTCCCTTGCTAATTCATGGGGCGGTGGGATTCTTCTTTCTGTATATAATCTTTGATTGTGCACGAAGACTTTTTACCTTTTTGTCCTTTGCTGAAACCCAAGTGTGTGAAAAACACGACACTCCCAAAAAACTGAGCGAGAAATTAGTTGATGAAAGCTTAAACAGGGAAGAGGTGGAAATGGTTATGGCTAATTTAGGTATTTTTGCCAATCCTGAAGGTGTGAAGATTCAGGAAAGGTTGGACATTTTTGAACTTTTCGGAGAGGAATTAGAAGCTAAAGAGCAAGAAGTAAGAGAAGCTTTTGATGTGTTTGACGAGAACAAAGATGGATTTATTGATGAAAGGGATTTGCAGAGAGTTCTGTGTGCTCTGGGATTAAAGGGTGTTGCAGAATTGGATAATTGCAAGAAGATGATCATGGCCTTTGATGAAAATGGAGATGGAAGAATCGATTTCCAGGAATTTGTCAAAATGTTGTAACAACAATCAACACAAACATTTTGTAACATTCTTTAATTTGTTCCATTTACTCTAATTTTTAAATATCTTTTATACTTATTTATAATTTTTATCTTTTAATATAATTATTTCATGTTTGAAAATTAGAATTCTTATGATCTAATAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E288821" ref_strand="+" ref_description="SGN-E288821 [cLES-17-D19]">
      <seq>aatatggcagcttctaattatttgaatcgatttccattcaagaaattccctgtgactactattccagttcccttgctaattcatggggcggggggattcttctttctgtatataatctttgattgtgcacgaagactttttacctttttgtcctttgctgaaacccaagtgtgtgaaaaacacgacactcccaaaaaactgagcgagaaattagttgatggaagcttaaacagggaagaggtggaaatggttatggctaatttaggtatttttgccaatcctgaaggtgtgaagattcangagaggttggacatttttgaacttttcggagaggaattagaagctaaagagcaagaagtaagagaagcttttgatgtgtttgacgagaacaaagatggatttattgatgaaagggatttgcagagagttctgtgtgctctgggatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="+" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="64224" stop="65269"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64524" g_stop="64969" g_length="446"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="446" r_length="446" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="+" ref_id="SGN-E288821" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>446</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E288821" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64524" e_stop="64969"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATATGGCAGCTTCTAATTATTTGAATCGATTTCCATTCAAGAAATTCCCTGTAACTACTATTCCAGTTCCCTTGCTAATTCATGGGGCGGTGGGATTCTTCTTTCTGTATATAATCTTTGATTGTGCACGAAGACTTTTTACCTTTTTGTCCTTTGCTGAAACCCAAGTGTGTGAAAAACACGACACTCCCAAAAAACTGAGCGAGAAATTAGTTGATGGAAGCTTAAACAGGGAAGAGGTGGAAATGGTTATGGCTAATTTAGGTATTTTTGCCAATCCTGAAGGTGTGAAGATTCAGGAGAGGTTGGACATTTTTGAACTTTTCGGAGAGGAATTAGAAGCTAAAGAGCAAGAAGTAAGAGAAGCTTTTGATGTGTTTGACGAGAACAAAGATGGATTTATTGATGAAAGGGATTTGCAGAGAGTTCTGTGTGCTCTGGGATT</genome_strand>
        <mrna_strand>AATATGGCAGCTTCTAATTATTTGAATCGATTTCCATTCAAGAAATTCCCTGTGACTACTATTCCAGTTCCCTTGCTAATTCATGGGGCGGGGGGATTCTTCTTTCTGTATATAATCTTTGATTGTGCACGAAGACTTTTTACCTTTTTGTCCTTTGCTGAAACCCAAGTGTGTGAAAAACACGACACTCCCAAAAAACTGAGCGAGAAATTAGTTGATGGAAGCTTAAACAGGGAAGAGGTGGAAATGGTTATGGCTAATTTAGGTATTTTTGCCAATCCTGAAGGTGTGAAGATTCANGAGAGGTTGGACATTTTTGAACTTTTCGGAGAGGAATTAGAAGCTAAAGAGCAAGAAGTAAGAGAAGCTTTTGATGTGTTTGACGAGAACAAAGATGGATTTATTGATGAAAGGGATTTGCAGAGAGTTCTGTGTGCTCTGGGATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E205510" ref_strand="+" ref_description="SGN-E205510 [cLEC-28-J9]">
      <seq>gaaaaacacgacactcccaaaaaactgagcgagaaattagttgatggaagcttaaacagggaagaggtggaaatggttatggctaatttaggtatttttgccaatcctgaaggtgtgaagattcaggagaggttggacatttttgaacttttcggagaggaattagaagctaaagagcaagaagtaagagaagcttttgatgtgtttgacgagaacaaagatggatttattgatgaaagggatttgcagagagttctgtgtgctctgggattaaagggtgttgcagaattggataattgcaagaagatgatcatggcctttgatgaaaatggagatggaagaatcgatttccaggaatttgtcaaaatgttgtaacaacaatcaacacaaacattttgtaacattctttaatttgttccatttactctaatttttaaatatcttttatacttatttataatttttatcttttaatataattatttcatgtttgaaaattagaattcttatgatctaataaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="+" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="64398" stop="65524"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64698" g_stop="65227" g_length="530"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="530" r_length="530" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="+" ref_id="SGN-E205510" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>530</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E205510" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64698" e_stop="65227"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAAAACACGACACTCCCAAAAAACTGAGCGAGAAATTAGTTGATGGAAGCTTAAACAGGGAAGAGGTGGAAATGGTTATGGCTAATTTAGGTATTTTTGCCAATCCTGAAGGTGTGAAGATTCAGGAGAGGTTGGACATTTTTGAACTTTTCGGAGAGGAATTAGAAGCTAAAGAGCAAGAAGTAAGAGAAGCTTTTGATGTGTTTGACGAGAACAAAGATGGATTTATTGATGAAAGGGATTTGCAGAGAGTTCTGTGTGCTCTGGGATTAAAGGGTGTTGCAGAATTGGATAATTGCAAGAAGATGATCATGGCCTTTGATGAAAATGGAGATGGAAGAATCGATTTCCAGGAATTTGTCAAAATGTTGTAACAACAATCAACACAAACATTTTGTAACATTCTTTAATTTGTTCCATTTACTCTAATTTTTAAATATCTTTTATACTTATTTATAATTTTTATCTTTTAATATAATTATTTCATGTTTGAAAATTAGAATTCTTATGATCTAATAAAATTATAGTC</genome_strand>
        <mrna_strand>GAAAAACACGACACTCCCAAAAAACTGAGCGAGAAATTAGTTGATGGAAGCTTAAACAGGGAAGAGGTGGAAATGGTTATGGCTAATTTAGGTATTTTTGCCAATCCTGAAGGTGTGAAGATTCAGGAGAGGTTGGACATTTTTGAACTTTTCGGAGAGGAATTAGAAGCTAAAGAGCAAGAAGTAAGAGAAGCTTTTGATGTGTTTGACGAGAACAAAGATGGATTTATTGATGAAAGGGATTTGCAGAGAGTTCTGTGTGCTCTGGGATTAAAGGGTGTTGCAGAATTGGATAATTGCAAGAAGATGATCATGGCCTTTGATGAAAATGGAGATGGAAGAATCGATTTCCAGGAATTTGTCAAAATGTTGTAACAACAATCAACACAAACATTTTGTAACATTCTTTAATTTGTTCCATTTACTCTAATTTTTAAATATCTTTTATACTTATTTATAATTTTTATCTTTTAATATAATTATTTCATGTTTGAAAATTAGAATTCTTATGATCTAATAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E356757" ref_strand="+" ref_description="SGN-E356757 [cTOS-21-H11]">
      <seq>attcaggagaggttggacatttttgaacttttcggagaggaattagaagctaaagagcaagaagtaagagaagcttttgatgtgtttgacgagaacaaagatggatttattgatgaaagggatttgcagagagttctgtgtgctctgggattaaagggtgttgcagaattggataattgcaagaagatgatcatggcctttgatgaaaatggagatggaagaatcgatttccaggaatttgtcaaaatgttgtaacaacaatcaacacaaacattttgtaacattctttaatttgttccatttactctaatttttaaatatcttttatacttatttataatttttatcttttaatataattatttcatgtttgaaaattagaattcttatgatctaataaaattatagtctacaaatgttgatgcaaaaggaatatcaattcaacaataatatcgaacatttgttttttagttttatgttgatttatacaattaaaatacatgatctaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="+" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="64518" stop="66089"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64818" g_stop="65325" g_length="508"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="508" r_length="508" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="509" polyA_stop="527"/>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="+" ref_id="SGN-E356757" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>508</cumulative_length_of_scored_exons>
        <coverage percentage="0.964" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E356757" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64818" e_stop="65325"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTCAGGAGAGGTTGGACATTTTTGAACTTTTCGGAGAGGAATTAGAAGCTAAAGAGCAAGAAGTAAGAGAAGCTTTTGATGTGTTTGACGAGAACAAAGATGGATTTATTGATGAAAGGGATTTGCAGAGAGTTCTGTGTGCTCTGGGATTAAAGGGTGTTGCAGAATTGGATAATTGCAAGAAGATGATCATGGCCTTTGATGAAAATGGAGATGGAAGAATCGATTTCCAGGAATTTGTCAAAATGTTGTAACAACAATCAACACAAACATTTTGTAACATTCTTTAATTTGTTCCATTTACTCTAATTTTTAAATATCTTTTATACTTATTTATAATTTTTATCTTTTAATATAATTATTTCATGTTTGAAAATTAGAATTCTTATGATCTAATAAAATTATAGTCTACAAATGTTGATGCAAAAGGAATATCAATTCAACAATAATATCGAACATTTGTTTTTTAGTTTTATGTTGATTTATACAATTAAAATACATGATCTA</genome_strand>
        <mrna_strand>ATTCAGGAGAGGTTGGACATTTTTGAACTTTTCGGAGAGGAATTAGAAGCTAAAGAGCAAGAAGTAAGAGAAGCTTTTGATGTGTTTGACGAGAACAAAGATGGATTTATTGATGAAAGGGATTTGCAGAGAGTTCTGTGTGCTCTGGGATTAAAGGGTGTTGCAGAATTGGATAATTGCAAGAAGATGATCATGGCCTTTGATGAAAATGGAGATGGAAGAATCGATTTCCAGGAATTTGTCAAAATGTTGTAACAACAATCAACACAAACATTTTGTAACATTCTTTAATTTGTTCCATTTACTCTAATTTTTAAATATCTTTTATACTTATTTATAATTTTTATCTTTTAATATAATTATTTCATGTTTGAAAATTAGAATTCTTATGATCTAATAAAATTATAGTCTACAAATGTTGATGCAAAAGGAATATCAATTCAACAATAATATCGAACATTTGTTTTTTAGTTTTATGTTGATTTATACAATTAAAATACATGATCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E350558" ref_strand="+" ref_description="SGN-E350558 [cTOS-5-D15]">
      <seq>attcaggagaggttggacatttttgaacttttcggagaggaattagaagctaaagagcaagaagtaagagaagcttttgatgtgtttgacgagaacaaagatggatttattgatgaaagggatttgcagagagttctgtgtgctctgggattaaagggtgttgcagaattggataattgcaagaagatgatcatggcctttgatgaaaatggagatggaagaatcgatttccaggaatttgtcaaaatgttgtaacaacaatcaacacaaacattttgtaacattctttaatttgttccatttactctaatttttaaatatcttttatacttatttataatttttatcttttaatataattatttcatgtttgaaaattagaattcttatgatctaataaaattatagtctacaaatgttgatgcaaaaggaatatcaattcaacaataatatcgaacatttgttttttagttttatgttgatttatacaattaaaatacatgatct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="+" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="64518" stop="65624"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64818" g_stop="65324" g_length="507"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="507" r_length="507" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="+" ref_id="SGN-E350558" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>507</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E350558" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64818" e_stop="65324"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTCAGGAGAGGTTGGACATTTTTGAACTTTTCGGAGAGGAATTAGAAGCTAAAGAGCAAGAAGTAAGAGAAGCTTTTGATGTGTTTGACGAGAACAAAGATGGATTTATTGATGAAAGGGATTTGCAGAGAGTTCTGTGTGCTCTGGGATTAAAGGGTGTTGCAGAATTGGATAATTGCAAGAAGATGATCATGGCCTTTGATGAAAATGGAGATGGAAGAATCGATTTCCAGGAATTTGTCAAAATGTTGTAACAACAATCAACACAAACATTTTGTAACATTCTTTAATTTGTTCCATTTACTCTAATTTTTAAATATCTTTTATACTTATTTATAATTTTTATCTTTTAATATAATTATTTCATGTTTGAAAATTAGAATTCTTATGATCTAATAAAATTATAGTCTACAAATGTTGATGCAAAAGGAATATCAATTCAACAATAATATCGAACATTTGTTTTTTAGTTTTATGTTGATTTATACAATTAAAATACATGATCT</genome_strand>
        <mrna_strand>ATTCAGGAGAGGTTGGACATTTTTGAACTTTTCGGAGAGGAATTAGAAGCTAAAGAGCAAGAAGTAAGAGAAGCTTTTGATGTGTTTGACGAGAACAAAGATGGATTTATTGATGAAAGGGATTTGCAGAGAGTTCTGTGTGCTCTGGGATTAAAGGGTGTTGCAGAATTGGATAATTGCAAGAAGATGATCATGGCCTTTGATGAAAATGGAGATGGAAGAATCGATTTCCAGGAATTTGTCAAAATGTTGTAACAACAATCAACACAAACATTTTGTAACATTCTTTAATTTGTTCCATTTACTCTAATTTTTAAATATCTTTTATACTTATTTATAATTTTTATCTTTTAATATAATTATTTCATGTTTGAAAATTAGAATTCTTATGATCTAATAAAATTATAGTCTACAAATGTTGATGCAAAAGGAATATCAATTCAACAATAATATCGAACATTTGTTTTTTAGTTTTATGTTGATTTATACAATTAAAATACATGATCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E689229" ref_strand="+" ref_description="SGN-E689229 [t3_tus_80_K13]">
      <seq>attttctttcttttagaattctagtaagttcttttctaacaagaattttagtaagttcttttataacacgttatcagcacgaaattgctacttgcaaaggtactatataaatatttttatttaattcacatattctctcataattttcattatgtcgaatttatccaaacttgagtttgtggcattagatatttctggaaagaattatctttcatgggtactcgatgctgagattcacttggctgctaaaggtcttgatgccactattactcagggaaatgaagcatcgagtcaagataaggcgaaggctatgattttccttcgtcatcatcttgatgagggcctgaagattgaatatctgacagtgaaagatccacttgaattgtggactgatttaaaggggagatatgaccacctaaaggcaacagtgttgccaagagctcgttatgagtggatgcatttacggtttcaagattttaagaccgtaattgaatacaactctgctgtattcaggataacctcccagttgaaattatgtggggagactataaaagatgaggacatgttggaaaagacacttactacttttcatgcctcgaatgtgatattgcagcagcaatatcgtgaaaagggttttcagaaatattctgaactaatctcatgtcttttggtggctgagcaacataatgctcttttaatgaaaaatcatgaagctcgtcccactggagctgctccattaccggaggcaaatgcggtggaagcacgtgatcaatctgaagtaaaaagaaatgatcatcggggatataataatgcacggggacgtggcaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="+" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="66187" stop="67557"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="66495" g_stop="67257" g_length="763"/>
          <reference_exon_boundary r_type="cDNA" r_start="65" r_stop="828" r_length="764" r_score="0.970"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="+" ref_id="SGN-E689229" ref_strand="+">
        <total_alignment_score>0.970</total_alignment_score>
        <cumulative_length_of_scored_exons>763</cumulative_length_of_scored_exons>
        <coverage percentage="0.921" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E689229" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="66495" e_stop="67257"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACACGTTATCAGCACGAAGTTGCTACTTGCAAAGGTATTATATAAATATTTTTATTTGATTCACATATTCTTTCATAA-TTTCATTATGTCGAATTTATCCAAACTTGAGTTTGTGGCATTAGATATTTCTGGAAAGAATTATCTTTCATGGGTACTCGATGCTGAGATTCACTTGGCTGCTAAAGGTCTTGATGCCGCTATTACTCAGGGAAATGAAGCATCGAGTCAAGATAAGGCAAAAACTATGATTTTCCTTCGTCATCATCTTGATGAGGGCCTGAAGATTGAATATCTGACGGTGAAAGATCCACTTGAATTGTGGACTGACTTAAAGGGGAGATATGACCACCTAAAGGCAACAGTGTTGCCAAGAGCCCGTTATGAGTGGATGCATTTACGGTTTCAAGATTTTAAGACCGTAATTGAATACAACTCTGCTGTATTCAGGATAACCTCCCAGTTAAAATTATGTGGGGAGACTATAAAAGATGAGGACATGTTGGAAAAGACACTTACTACTTTCCATGCCTCAAATATGATATTGCAGCAACAATATCGTGAAAAGGGTTTTCAGAAATATTCTGAACTAATTTCATGTCTTTTGGTGGTTGAGCAACATAATGCTCTTTTAATGAAAAATCATGAAGCTCGTCCCACTGGAGCTGCTCCATTACCGGAGGCAAATGTGGTGGAAGCACGTGATCAATCTGAAGTAAAAAGAGATGATCATCGGGGCTATAATAATGCACGGGGACGTGGCAA</genome_strand>
        <mrna_strand>AACACGTTATCAGCACGAAATTGCTACTTGCAAAGGTACTATATAAATATTTTTATTTAATTCACATATTCTCTCATAATTTTCATTATGTCGAATTTATCCAAACTTGAGTTTGTGGCATTAGATATTTCTGGAAAGAATTATCTTTCATGGGTACTCGATGCTGAGATTCACTTGGCTGCTAAAGGTCTTGATGCCACTATTACTCAGGGAAATGAAGCATCGAGTCAAGATAAGGCGAAGGCTATGATTTTCCTTCGTCATCATCTTGATGAGGGCCTGAAGATTGAATATCTGACAGTGAAAGATCCACTTGAATTGTGGACTGATTTAAAGGGGAGATATGACCACCTAAAGGCAACAGTGTTGCCAAGAGCTCGTTATGAGTGGATGCATTTACGGTTTCAAGATTTTAAGACCGTAATTGAATACAACTCTGCTGTATTCAGGATAACCTCCCAGTTGAAATTATGTGGGGAGACTATAAAAGATGAGGACATGTTGGAAAAGACACTTACTACTTTTCATGCCTCGAATGTGATATTGCAGCAGCAATATCGTGAAAAGGGTTTTCAGAAATATTCTGAACTAATCTCATGTCTTTTGGTGGCTGAGCAACATAATGCTCTTTTAATGAAAAATCATGAAGCTCGTCCCACTGGAGCTGCTCCATTACCGGAGGCAAATGCGGTGGAAGCACGTGATCAATCTGAAGTAAAAAGAAATGATCATCGGGGATATAATAATGCACGGGGACGTGGCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E206250" ref_strand="+" ref_description="SGN-E206250 [cLEC-29-L2]">
      <seq>acgaatttgctacttgcatagaaatctccaattgtcagttggattcaagatgagtaatggagatgtatacctttttcatagtgctactacacatacaatattaaaagaaaagaaaagaaatacttttctaatttggttatgaaaatgacatatgtcaacacaatatcaggtagtacaaaattaattgagagctctggaagagcgaccttattacaacctggagagacaatattggacatttgtaatgcattataccgtagtaagtcacaaagaaacttattaagtttcagagtaattcgccaaaatggctatcacgttgagacgactaatgaaggaaaggatgaatgcctttacattactacaattaatgtacagaagaaaattgtgcatgaaaaattacgtgcattttcttctaggttctactatacaagtgtaagtacagttgaatcacatgtcgtagtaaacaaaaggtttactaattttaatgattctattatttggtatgaccggttgggccatcccggatttaatatgatgcacagaatcattgagaattcacgtgggcacacctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="+" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="67488" stop="68637"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="67792" g_stop="68337" g_length="546"/>
          <reference_exon_boundary r_type="cDNA" r_start="22" r_stop="572" r_length="551" r_score="0.903"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="+" ref_id="SGN-E206250" ref_strand="+">
        <total_alignment_score>0.903</total_alignment_score>
        <cumulative_length_of_scored_exons>546</cumulative_length_of_scored_exons>
        <coverage percentage="0.955" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E206250" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="67792" e_stop="68337"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAATCCCCAGTTGACAGTTGGATTCAAGATGAGTAATGGAAATGTATGTCTTCTTGATAGTGCTACAACACATACAATATTAAAAGAAAAGAAATG-----CTTTTCTAATTTGGTTATGAAAATGACATATGTCAACACAATATCAGGTAGTACAAAATTAATTGAGGGCTCTGGAAGAGCGACCTTATTACTACCTGGAGGGACAATATTAAGCATTGATAATGCATTATATTGTAGTAAGTCTCAAAGAAACTTATTAAGTTTCAAAGTTATTCGCCAAAATGGCTATCATGTTGAGACGGCTAATGAAGGAAAGGTTGAATACCTTTACATTACTACAATTAATGTTGAGAAGAAAATTGTGCATGAAAAATTACCTGCATTTTCTTCTGGGTTGTACTATACAAGTATAAGTACAGTTGAATCACATGCCGTAATAAACAAAAGGTTTACTAATTTTAATGATTTTATCATTTGGCATGACCGGTTGGGCCATCCTGGATTTAATATGATGCGCAAAATCATTGAGAATTCACATGGACACACCTT</genome_strand>
        <mrna_strand>AAATCTCCAATTGTCAGTTGGATTCAAGATGAGTAATGGAGATGTATACCTTTTTCATAGTGCTACTACACATACAATATTAAAAGAAAAGAAAAGAAATACTTTTCTAATTTGGTTATGAAAATGACATATGTCAACACAATATCAGGTAGTACAAAATTAATTGAGAGCTCTGGAAGAGCGACCTTATTACAACCTGGAGAGACAATATTGGACATTTGTAATGCATTATACCGTAGTAAGTCACAAAGAAACTTATTAAGTTTCAGAGTAATTCGCCAAAATGGCTATCACGTTGAGACGACTAATGAAGGAAAGGATGAATGCCTTTACATTACTACAATTAATGTACAGAAGAAAATTGTGCATGAAAAATTACGTGCATTTTCTTCTAGGTTCTACTATACAAGTGTAAGTACAGTTGAATCACATGTCGTAGTAAACAAAAGGTTTACTAATTTTAATGATTCTATTATTTGGTATGACCGGTTGGGCCATCCCGGATTTAATATGATGCACAGAATCATTGAGAATTCACGTGGGCACACCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E332350" ref_strand="+" ref_description="SGN-E332350 [cTOD-17-L10]">
      <seq>ttttctaatttggttatgaaaatggcatatgtcaacacaaaattaattgagggctctggaagagcgaccttattactacctggagggacaatattaagcattgataatgcattatattgtagtaagtctcaaagaaacttattaagtttcaaagttattcgccaaaatggctatcatgttgagacggctaatgaaggaaaggttgaatacctttacattactacaattaatgttgagaagaaaattgtgcatgaaaaattacctgcattttcttctgggttgtactatacaagtataagtacagttgaatcacatgccgtagtaaacaaaaggtttactaattttaatgattttatcatttggcatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="+" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="67589" stop="68570"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="67902" g_stop="68270" g_length="369"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="367" r_length="367" r_score="0.943"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="+" ref_id="SGN-E332350" ref_strand="+">
        <total_alignment_score>0.943</total_alignment_score>
        <cumulative_length_of_scored_exons>369</cumulative_length_of_scored_exons>
        <coverage percentage="1.005" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E332350" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="67902" e_stop="68270"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTATGAAAATGACATATGTCAACACAATATCAGGTAGTACAAAATTAATTGAGGGCTCTGGAAGAGCGACCTTATTACTACCTGGAGGGACAATATTAAGCATTGATAATGCATTATATTGTAGTAAGTCTCAAAGAAACTTATTAAGTTTCAAAGTTATTCGCCAAAATGGCTATCATGTTGAGACGGCTAATGAAGGAAAGGTTGAATACCTTTACATTACTACAATTAATGTTGAGAAGAAAATTGTGCATGAAAAATTACCTGCATTTTCTTCTGGGTTGTACTATACAAGTATAAGTACAGTTGAATCACATGCCGTAATAAACAAAAGGTTTACTAATTTTAATGATTTTATCATTTGGCATG</genome_strand>
        <mrna_strand>TTTTCTAATTTGGTTATGAAAATGGCATAT--GTCAACACAAAATTAATTGAGGGCTCTGGAAGAGCGACCTTATTACTACCTGGAGGGACAATATTAAGCATTGATAATGCATTATATTGTAGTAAGTCTCAAAGAAACTTATTAAGTTTCAAAGTTATTCGCCAAAATGGCTATCATGTTGAGACGGCTAATGAAGGAAAGGTTGAATACCTTTACATTACTACAATTAATGTTGAGAAGAAAATTGTGCATGAAAAATTACCTGCATTTTCTTCTGGGTTGTACTATACAAGTATAAGTACAGTTGAATCACATGCCGTAGTAAACAAAAGGTTTACTAATTTTAATGATTTTATCATTTGGCATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E331947" ref_strand="+" ref_description="SGN-E331947 [cTOD-16-G12]">
      <seq>aaataatgcaacaatatgaagattttgagccaaaatctgttcacgaatgtagacagagaaatgattggccaaaatggaaggatgcaattcaagctgaattggcttcactagaaatacgtgaagtttttggaccgataatccgaacacctgaaggtatcaagccagtggggtacaaatgggtttttgtacggaaaagaaatgagaaagatgaagtcatgagatataaggcccgactcgttgctcaaggtttttctcaaagacctggcattgattatatggagacatattctccagtggtagatgcaatcaccttcagatatctcataaatttggcagttcatgaaaaacttgaaatgcgtctaatggacgttgtcacagcctatctatatggctcattggaccacaacattttcatgaaaattcctgaagcattcaaagttcctgaagcatacaaagattcaagagaaacttgttcaataaaacttcagaaatctctgtatggattgaaacaatcaggaaggatgtggtacaatcgtctgagtgaatatttgttaaagaaagggtacaaaaatgacccgatttgtccctgcatttttattaaacggtcggggtctgaatttgtaataatagctgtgtatgttgatgatttgaacatcattggcactggtaaagagcttttagaagctattgagtgtctgaaaaaagaatttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="+" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="69348" stop="70658"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="69648" g_stop="70358" g_length="711"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="711" r_length="711" r_score="0.961"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="+" ref_id="SGN-E331947" ref_strand="+">
        <total_alignment_score>0.961</total_alignment_score>
        <cumulative_length_of_scored_exons>711</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E331947" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="69648" e_stop="70358"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGTAATGCAACAAGATGAAGATTTTGAGCCAAAATCTGTTCGCGAATGTAAACAGAGAAATAATTGGCCAAAATGGAAGGATGCAATTCAAGCTGAATTGGCTTCACTAGAAAAACGTGAAGTTTTTGGACCAATAATCCGAACACCTGAAGGTATCAAGCCAGTGGGGTACAAATGGATTTTTGTACGAAAAAGAAATGAGAAAGGTGAAGTCATGAGATATAAGGCCCGACTCGTTGCTCAAGGTTTTTCTCAAAGACCTGGCATTGATTATATGAAGACATATTCTCCAGTGGTAGATGCAATCACCTTTAGATATCTCATAAATCTGGCAGTTCATGAAAAACTTGAAATGCGTCTAATGGACGTTGTCACGGCCTATCTATATGGCTCATTGGACCATAATATTTTCATGAAAATTCCTGAAGCATTCAAAGTGCCTGAAGCATACAAAGATTCAAGAGAAACTTGTTCAATAAAGCTTTTGAAGTCTCTGTATGGATTGAAACAATCAGGAAGGATGTGGTACAATCGTCTAAGTGAATATTTGTTAAAGAAAGGGTACAAAAATGACCCGATTTGTCCCTGTATTTTCATTAAACGGTCGGGGTCTGAATTTGTAATAATAGTTGTGTATGTTGATGATTTGAACATCATTGGCACTCGTAAAGAGCTTTTAGAAGCTGTTGAGTGTCTGCAAAAAGAATTTG</genome_strand>
        <mrna_strand>AAATAATGCAACAATATGAAGATTTTGAGCCAAAATCTGTTCACGAATGTAGACAGAGAAATGATTGGCCAAAATGGAAGGATGCAATTCAAGCTGAATTGGCTTCACTAGAAATACGTGAAGTTTTTGGACCGATAATCCGAACACCTGAAGGTATCAAGCCAGTGGGGTACAAATGGGTTTTTGTACGGAAAAGAAATGAGAAAGATGAAGTCATGAGATATAAGGCCCGACTCGTTGCTCAAGGTTTTTCTCAAAGACCTGGCATTGATTATATGGAGACATATTCTCCAGTGGTAGATGCAATCACCTTCAGATATCTCATAAATTTGGCAGTTCATGAAAAACTTGAAATGCGTCTAATGGACGTTGTCACAGCCTATCTATATGGCTCATTGGACCACAACATTTTCATGAAAATTCCTGAAGCATTCAAAGTTCCTGAAGCATACAAAGATTCAAGAGAAACTTGTTCAATAAAACTTCAGAAATCTCTGTATGGATTGAAACAATCAGGAAGGATGTGGTACAATCGTCTGAGTGAATATTTGTTAAAGAAAGGGTACAAAAATGACCCGATTTGTCCCTGCATTTTTATTAAACGGTCGGGGTCTGAATTTGTAATAATAGCTGTGTATGTTGATGATTTGAACATCATTGGCACTGGTAAAGAGCTTTTAGAAGCTATTGAGTGTCTGAAAAAAGAATTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E205887" ref_strand="+" ref_description="SGN-E205887 [cLEC-20-D8]">
      <seq>cgatttgtccctgcatttttattaaacggtcggggtctgaatttgtaataatagctgtgtatgttgatgatttgaacatcattggcactggtaaagagcttttagaagctattgagtgtctgaaaaaagaatttgaaatgaaagatctcggcaagacaaaattttgtcttggcctacagattgagaatttgtcaaatggaatacttgttcatcaatcaacgtacacagaaaagatactaaagcgtttttacatggataactcacatccattgagtacgccaatggtggtaagatcgcttgacatcaatacagatccatttcgacctcaagagaatgatgaagagcttcttggtgatgaaactccttatcttagtgcgatcggggcactaatgtaccttgctaacaacactcgaccagatatctgttttgcagtaagtctactggcaagattcagttcctccccaacaaaaagacattggaatggtgttaaacacatacttcgatatcttcgagggaccatggacatgggtttattctattccaatgaatccaaatcagaactgattggttacgcagatgcagggtatttatcagatccgcataaagcccgatcacaaacaggctatttgtttacatgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="+" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="69924" stop="71161"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70224" g_stop="70861" g_length="638"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="638" r_length="638" r_score="0.975"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="+" ref_id="SGN-E205887" ref_strand="+">
        <total_alignment_score>0.975</total_alignment_score>
        <cumulative_length_of_scored_exons>638</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E205887" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70224" e_stop="70861"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGATTTGTCCCTGTATTTTCATTAAACGGTCGGGGTCTGAATTTGTAATAATAGTTGTGTATGTTGATGATTTGAACATCATTGGCACTCGTAAAGAGCTTTTAGAAGCTGTTGAGTGTCTGCAAAAAGAATTTGAAATGAAATATCTCGGCAAGACAAAATTTTGTCTTGGTCTACAGATTGAGAATTTGTCAAATGGAATACTTGTTCATCAATCAACGTACACAGAAAAGATACTAAAGCGTTTTTACATGGATAACTCACATCCATTGAGTACTCCAATGGTGGTAAGATCGCTTGGCATCAATACAGATCCATTTCGACCTCAAGAGAATGATGAAGAGCTTCTTGGTGATGAAACTCCTTATCTTAGTGCGATCGGGGCACTAATGTACCTTGCTAACAATACTTGACCAGATATCTGTTTTGCAGTAAGTCTACTGGCAAGATTCAGTTCCTCCCCAACAAAAAGACATTGGAATGGTGTTAAACACATACTTAGATATGTTCGAGGGACCATGGACATGGGTTTATTCTATTCCAATGAATCCAAATCAGAACTGATTGGTTACGCAGATGCAGGGTATTTATCAGATCCACATAAAGCTCGATCACAAACAGGCTATTTGTTTACATGT</genome_strand>
        <mrna_strand>CGATTTGTCCCTGCATTTTTATTAAACGGTCGGGGTCTGAATTTGTAATAATAGCTGTGTATGTTGATGATTTGAACATCATTGGCACTGGTAAAGAGCTTTTAGAAGCTATTGAGTGTCTGAAAAAAGAATTTGAAATGAAAGATCTCGGCAAGACAAAATTTTGTCTTGGCCTACAGATTGAGAATTTGTCAAATGGAATACTTGTTCATCAATCAACGTACACAGAAAAGATACTAAAGCGTTTTTACATGGATAACTCACATCCATTGAGTACGCCAATGGTGGTAAGATCGCTTGACATCAATACAGATCCATTTCGACCTCAAGAGAATGATGAAGAGCTTCTTGGTGATGAAACTCCTTATCTTAGTGCGATCGGGGCACTAATGTACCTTGCTAACAACACTCGACCAGATATCTGTTTTGCAGTAAGTCTACTGGCAAGATTCAGTTCCTCCCCAACAAAAAGACATTGGAATGGTGTTAAACACATACTTCGATATCTTCGAGGGACCATGGACATGGGTTTATTCTATTCCAATGAATCCAAATCAGAACTGATTGGTTACGCAGATGCAGGGTATTTATCAGATCCGCATAAAGCCCGATCACAAACAGGCTATTTGTTTACATGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E209835" ref_strand="+" ref_description="SGN-E209835 [cLEC-52-G1]">
      <seq>atttgtaataatagctgtgtatgttgatgatttgaacatcattggcactggtaaagagcttttagaagctattgagtgtctgaaaaaagaatttgaaatgaaagatctcggcaagacaaaattttgtcttggcctacagattgagaatttgtcaaatggaatacttgttcatcaatcaacgtacacagaaaagatactaaagcgtttttacatggataactcacatccattgagtactccaatggtggtaagatcgcttgacatcaatacagatccatttcgacctcaagagaatgatgaagagcttcttggtgatgaaactccttatcttagtgcgatcggggcactaatgtaccttgctaacaatactcgaccagatatctgttttgcagtaagtctactggcaagattcagttcctccccaacaaaaagacattggaatggtgttaaacacatacttcgatatcttcgagggaccatggacatgggtttattctattccaatgaatccaaatcagaactgattggttacgcagatgcagggtatttatcagatccgcataaagcccgatcacaaacaggctatttgtttacatgtggagacacggcaatatcttggcgatcaatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="+" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="69964" stop="71191"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70264" g_stop="70891" g_length="628"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="628" r_length="628" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="+" ref_id="SGN-E209835" ref_strand="+">
        <total_alignment_score>0.981</total_alignment_score>
        <cumulative_length_of_scored_exons>628</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E209835" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70264" e_stop="70891"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTGTAATAATAGTTGTGTATGTTGATGATTTGAACATCATTGGCACTCGTAAAGAGCTTTTAGAAGCTGTTGAGTGTCTGCAAAAAGAATTTGAAATGAAATATCTCGGCAAGACAAAATTTTGTCTTGGTCTACAGATTGAGAATTTGTCAAATGGAATACTTGTTCATCAATCAACGTACACAGAAAAGATACTAAAGCGTTTTTACATGGATAACTCACATCCATTGAGTACTCCAATGGTGGTAAGATCGCTTGGCATCAATACAGATCCATTTCGACCTCAAGAGAATGATGAAGAGCTTCTTGGTGATGAAACTCCTTATCTTAGTGCGATCGGGGCACTAATGTACCTTGCTAACAATACTTGACCAGATATCTGTTTTGCAGTAAGTCTACTGGCAAGATTCAGTTCCTCCCCAACAAAAAGACATTGGAATGGTGTTAAACACATACTTAGATATGTTCGAGGGACCATGGACATGGGTTTATTCTATTCCAATGAATCCAAATCAGAACTGATTGGTTACGCAGATGCAGGGTATTTATCAGATCCACATAAAGCTCGATCACAAACAGGCTATTTGTTTACATGTGGAGACACGGCAATATCTTGGCGATCAATG</genome_strand>
        <mrna_strand>ATTTGTAATAATAGCTGTGTATGTTGATGATTTGAACATCATTGGCACTGGTAAAGAGCTTTTAGAAGCTATTGAGTGTCTGAAAAAAGAATTTGAAATGAAAGATCTCGGCAAGACAAAATTTTGTCTTGGCCTACAGATTGAGAATTTGTCAAATGGAATACTTGTTCATCAATCAACGTACACAGAAAAGATACTAAAGCGTTTTTACATGGATAACTCACATCCATTGAGTACTCCAATGGTGGTAAGATCGCTTGACATCAATACAGATCCATTTCGACCTCAAGAGAATGATGAAGAGCTTCTTGGTGATGAAACTCCTTATCTTAGTGCGATCGGGGCACTAATGTACCTTGCTAACAATACTCGACCAGATATCTGTTTTGCAGTAAGTCTACTGGCAAGATTCAGTTCCTCCCCAACAAAAAGACATTGGAATGGTGTTAAACACATACTTCGATATCTTCGAGGGACCATGGACATGGGTTTATTCTATTCCAATGAATCCAAATCAGAACTGATTGGTTACGCAGATGCAGGGTATTTATCAGATCCGCATAAAGCCCGATCACAAACAGGCTATTTGTTTACATGTGGAGACACGGCAATATCTTGGCGATCAATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E209830" ref_strand="+" ref_description="SGN-E209830 [cLEC-52-E1]">
      <seq>atttgtaataatagctgtgtatgttgatgatttgaacatcattggcactggtaaagagcttttagaagctattgagtgtctgaaaaaagaatttgaaatgaaagatctcggcaagacaaaattttgtcttggcctacagattgagaatttgtcaaatggaatacttgttcatcaatcaacgtacacagaaaagatactaaagcgtttttacatggataactcacatccattgagtactccaatggtggtaagatcgcttgacatcaatacagatccatttcgacctcaagagaatgatgaagagcttcttggtgatgaaactccttatcttagtgcgatcggggcactaatgtaccttgctaacaatactcgaccagatatctgttttgcagtaagtctactggcaagattcagttcctccccaacaaaaagacattggaatggtgttaaacacatacttcgatatcttcgagggaccatggacatgggtttattctattccaatgaatgcaaatcagaactgattggttacgcagatgcaaggtatttatcagatccgcataaagcccgatcaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="+" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="69964" stop="71139"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70264" g_stop="70839" g_length="576"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="576" r_length="576" r_score="0.976"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="+" ref_id="SGN-E209830" ref_strand="+">
        <total_alignment_score>0.976</total_alignment_score>
        <cumulative_length_of_scored_exons>576</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E209830" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70264" e_stop="70839"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTGTAATAATAGTTGTGTATGTTGATGATTTGAACATCATTGGCACTCGTAAAGAGCTTTTAGAAGCTGTTGAGTGTCTGCAAAAAGAATTTGAAATGAAATATCTCGGCAAGACAAAATTTTGTCTTGGTCTACAGATTGAGAATTTGTCAAATGGAATACTTGTTCATCAATCAACGTACACAGAAAAGATACTAAAGCGTTTTTACATGGATAACTCACATCCATTGAGTACTCCAATGGTGGTAAGATCGCTTGGCATCAATACAGATCCATTTCGACCTCAAGAGAATGATGAAGAGCTTCTTGGTGATGAAACTCCTTATCTTAGTGCGATCGGGGCACTAATGTACCTTGCTAACAATACTTGACCAGATATCTGTTTTGCAGTAAGTCTACTGGCAAGATTCAGTTCCTCCCCAACAAAAAGACATTGGAATGGTGTTAAACACATACTTAGATATGTTCGAGGGACCATGGACATGGGTTTATTCTATTCCAATGAATCCAAATCAGAACTGATTGGTTACGCAGATGCAGGGTATTTATCAGATCCACATAAAGCTCGATCACA</genome_strand>
        <mrna_strand>ATTTGTAATAATAGCTGTGTATGTTGATGATTTGAACATCATTGGCACTGGTAAAGAGCTTTTAGAAGCTATTGAGTGTCTGAAAAAAGAATTTGAAATGAAAGATCTCGGCAAGACAAAATTTTGTCTTGGCCTACAGATTGAGAATTTGTCAAATGGAATACTTGTTCATCAATCAACGTACACAGAAAAGATACTAAAGCGTTTTTACATGGATAACTCACATCCATTGAGTACTCCAATGGTGGTAAGATCGCTTGACATCAATACAGATCCATTTCGACCTCAAGAGAATGATGAAGAGCTTCTTGGTGATGAAACTCCTTATCTTAGTGCGATCGGGGCACTAATGTACCTTGCTAACAATACTCGACCAGATATCTGTTTTGCAGTAAGTCTACTGGCAAGATTCAGTTCCTCCCCAACAAAAAGACATTGGAATGGTGTTAAACACATACTTCGATATCTTCGAGGGACCATGGACATGGGTTTATTCTATTCCAATGAATGCAAATCAGAACTGATTGGTTACGCAGATGCAAGGTATTTATCAGATCCGCATAAAGCCCGATCACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E299938" ref_strand="+" ref_description="SGN-E299938 [cLEW-11-G21]">
      <seq>ctcgtgcccgtttagaagctattgagtgtctgaaaaaagaatttgaaatgaaagatctcggcaagacaaaattttgtcttggcctacagattgagaatttgtcaaatggaatacttgttcatcaatcaacgtacacagaaaagatactaaagcgtttttacatggataactcacatccattgagtaccccaatggtggtaagatcgcttgacatcaatacagatccatttcgacctcaagagaatgatgaagagcttcttggtgatgaaactccttatcttagtgcgatcggggcactaatgtaccttgctaaccacactcgaccagatatctgttttgcagtaagtctactggcaagattcagttcctccccaacaaaaagacattggaatggtgttaaacacatacttcgatatcttcgagggaccatggacatgggtttattctattccaatgaatccaaatcagaactgattggttacgcagatgcagggtatttatcagatcccgcataaagcccgatcacaaacaggctatttgtttacatgtggaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="+" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="70022" stop="71166"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70314" g_stop="70866" g_length="553"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="554" r_length="554" r_score="0.960"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="+" ref_id="SGN-E299938" ref_strand="+">
        <total_alignment_score>0.960</total_alignment_score>
        <cumulative_length_of_scored_exons>553</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E299938" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70314" e_stop="70866"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTAAAGAGCTTTTAGAAGCTGTTGAGTGTCTGCAAAAAGAATTTGAAATGAAATATCTCGGCAAGACAAAATTTTGTCTTGGTCTACAGATTGAGAATTTGTCAAATGGAATACTTGTTCATCAATCAACGTACACAGAAAAGATACTAAAGCGTTTTTACATGGATAACTCACATCCATTGAGTACTCCAATGGTGGTAAGATCGCTTGGCATCAATACAGATCCATTTCGACCTCAAGAGAATGATGAAGAGCTTCTTGGTGATGAAACTCCTTATCTTAGTGCGATCGGGGCACTAATGTACCTTGCTAACAATACTTGACCAGATATCTGTTTTGCAGTAAGTCTACTGGCAAGATTCAGTTCCTCCCCAACAAAAAGACATTGGAATGGTGTTAAACACATACTTAGATATGTTCGAGGGACCATGGACATGGGTTTATTCTATTCCAATGAATCCAAATCAGAACTGATTGGTTACGCAGATGCAGGGTATTTATCAGAT-CCACATAAAGCTCGATCACAAACAGGCTATTTGTTTACATGTGGAGA</genome_strand>
        <mrna_strand>CTCGTGCCCGTTTAGAAGCTATTGAGTGTCTGAAAAAAGAATTTGAAATGAAAGATCTCGGCAAGACAAAATTTTGTCTTGGCCTACAGATTGAGAATTTGTCAAATGGAATACTTGTTCATCAATCAACGTACACAGAAAAGATACTAAAGCGTTTTTACATGGATAACTCACATCCATTGAGTACCCCAATGGTGGTAAGATCGCTTGACATCAATACAGATCCATTTCGACCTCAAGAGAATGATGAAGAGCTTCTTGGTGATGAAACTCCTTATCTTAGTGCGATCGGGGCACTAATGTACCTTGCTAACCACACTCGACCAGATATCTGTTTTGCAGTAAGTCTACTGGCAAGATTCAGTTCCTCCCCAACAAAAAGACATTGGAATGGTGTTAAACACATACTTCGATATCTTCGAGGGACCATGGACATGGGTTTATTCTATTCCAATGAATCCAAATCAGAACTGATTGGTTACGCAGATGCAGGGTATTTATCAGATCCCGCATAAAGCCCGATCACAAACAGGCTATTTGTTTACATGTGGAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E211563" ref_strand="+" ref_description="SGN-E211563 [cLEC-67-I7]">
      <seq>ataactcacatccattgagtactccaatggtggtaagatcgcttgacatcaatacagatccatttcgacctcaagagaatgatgaagagcttcttggtgatgaaactccttatcttagtgcgatcggggcactaatgtaccttgctaacaatactcgaccagatatctgttttgcagtaagtctactggcaagattcagttcctccccaacaaaaagacattggaatggtgttaaacacatacttcgatatcttcgagggaccatggacatgggtttattctattccaatgaatccaaatcagaactgattggttacgcagatgcagggtatttatcagatccgcataaagcccgatcacaaacaggctatttgtttacatgtggagacacggcaatatcttggcgatcaatgaagcaaacgttggtagccacttcttcaaatcatgcagaaataatagccatccatgaagcaagtcgagagtgcgtctggttgagatcaatgacccatcatattcaggaaatgtgtggtttttctttgaaaaagaatataccaaccataatgtacgaagataatgctgcatgtatagctcaattgaaaggaggatacatcaaaggagaccggacaaagcatatctcaccaaagttctttttcacgcatgatcttcaacaaaatgggtgagatagaagtncaacaaattcgttcaagtgataatcttgctgatttattcacaaaggcattgccaacatcancgtttgagaagttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="+" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="70179" stop="71542"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70479" g_stop="71242" g_length="764"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="765" r_length="765" r_score="0.979"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="+" ref_id="SGN-E211563" ref_strand="+">
        <total_alignment_score>0.979</total_alignment_score>
        <cumulative_length_of_scored_exons>764</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E211563" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70479" e_stop="71242"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATAACTCACATCCATTGAGTACTCCAATGGTGGTAAGATCGCTTGGCATCAATACAGATCCATTTCGACCTCAAGAGAATGATGAAGAGCTTCTTGGTGATGAAACTCCTTATCTTAGTGCGATCGGGGCACTAATGTACCTTGCTAACAATACTTGACCAGATATCTGTTTTGCAGTAAGTCTACTGGCAAGATTCAGTTCCTCCCCAACAAAAAGACATTGGAATGGTGTTAAACACATACTTAGATATGTTCGAGGGACCATGGACATGGGTTTATTCTATTCCAATGAATCCAAATCAGAACTGATTGGTTACGCAGATGCAGGGTATTTATCAGATCCACATAAAGCTCGATCACAAACAGGCTATTTGTTTACATGTGGAGACACGGCAATATCTTGGCGATCAATGAAGCAAACATTGGTAGCCACTTCTTCAAATCATGCAGAAATAATAGCCATCCATGAAGCAAGTCGAGAGTGTGTCTGGTTGAGATCAATGACCCATCATATTCAGAAAATGTGTGGTTTTTCTTTGAAAAAGAATATACCAACCACAATGTACGAAGATAATGCTGCATGTATAGCTCAATTGAAAGGAGGATACATCAAAGGAGACCGGACAAAGCATATCTCACCAAAGTTCTTTTTCACGCATGATCTTCAACAAAAT-GGTGAGATAGAAGTTCAACAAATTCGTTCAAGTGATAATCTTGCTGATTTATTCACTAAGGCATTGCCAACATCAACATTTGAGAAGTTG</genome_strand>
        <mrna_strand>ATAACTCACATCCATTGAGTACTCCAATGGTGGTAAGATCGCTTGACATCAATACAGATCCATTTCGACCTCAAGAGAATGATGAAGAGCTTCTTGGTGATGAAACTCCTTATCTTAGTGCGATCGGGGCACTAATGTACCTTGCTAACAATACTCGACCAGATATCTGTTTTGCAGTAAGTCTACTGGCAAGATTCAGTTCCTCCCCAACAAAAAGACATTGGAATGGTGTTAAACACATACTTCGATATCTTCGAGGGACCATGGACATGGGTTTATTCTATTCCAATGAATCCAAATCAGAACTGATTGGTTACGCAGATGCAGGGTATTTATCAGATCCGCATAAAGCCCGATCACAAACAGGCTATTTGTTTACATGTGGAGACACGGCAATATCTTGGCGATCAATGAAGCAAACGTTGGTAGCCACTTCTTCAAATCATGCAGAAATAATAGCCATCCATGAAGCAAGTCGAGAGTGCGTCTGGTTGAGATCAATGACCCATCATATTCAGGAAATGTGTGGTTTTTCTTTGAAAAAGAATATACCAACCATAATGTACGAAGATAATGCTGCATGTATAGCTCAATTGAAAGGAGGATACATCAAAGGAGACCGGACAAAGCATATCTCACCAAAGTTCTTTTTCACGCATGATCTTCAACAAAATGGGTGAGATAGAAGTNCAACAAATTCGTTCAAGTGATAATCTTGCTGATTTATTCACAAAGGCATTGCCAACATCANCGTTTGAGAAGTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E201786" ref_strand="+" ref_description="SGN-E201786 [cLEC-11-H5]">
      <seq>tggtggtaagatcgcttgacatcaatacagatccatttcgacctcaagagaatgatgaagagcttcttggtgatgaaactccttatcttagtgcgatcggggcactaatgtaccttgctaacaatactcgaccagatatctgttttgcagtaagtctactggcaagattcagttcctccccaacaaaaagacattggaatggtgttaaacacatacttcgatatcttcgagggaccatggacatgggtttattctattccaatgaatccaaatcagaactgattggttacgcagatgcagggtatttatcagatccgcataaagcccgatcacaaacaggctatttgtttacatgtggagacacggcaatatcttggcgatcaatgaagcaaacgttggtagccacttcttcaaatcatgcagaaataatagccatccatgaagcaagtcgagagtgcgtctggttgagatcaatgacccatcatattcaggaaatgtgtggtttttctttgaaaaagaatataccacccttattgtccgaagataatgctgcatgtatagctcaattgaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="+" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="70206" stop="71376"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70506" g_stop="71076" g_length="571"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="571" r_length="571" r_score="0.975"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="+" ref_id="SGN-E201786" ref_strand="+">
        <total_alignment_score>0.975</total_alignment_score>
        <cumulative_length_of_scored_exons>571</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E201786" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70506" e_stop="71076"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGTGGTAAGATCGCTTGGCATCAATACAGATCCATTTCGACCTCAAGAGAATGATGAAGAGCTTCTTGGTGATGAAACTCCTTATCTTAGTGCGATCGGGGCACTAATGTACCTTGCTAACAATACTTGACCAGATATCTGTTTTGCAGTAAGTCTACTGGCAAGATTCAGTTCCTCCCCAACAAAAAGACATTGGAATGGTGTTAAACACATACTTAGATATGTTCGAGGGACCATGGACATGGGTTTATTCTATTCCAATGAATCCAAATCAGAACTGATTGGTTACGCAGATGCAGGGTATTTATCAGATCCACATAAAGCTCGATCACAAACAGGCTATTTGTTTACATGTGGAGACACGGCAATATCTTGGCGATCAATGAAGCAAACATTGGTAGCCACTTCTTCAAATCATGCAGAAATAATAGCCATCCATGAAGCAAGTCGAGAGTGTGTCTGGTTGAGATCAATGACCCATCATATTCAGAAAATGTGTGGTTTTTCTTTGAAAAAGAATATACCAACCACAATGTACGAAGATAATGCTGCATGTATAGCTCAATTGAA</genome_strand>
        <mrna_strand>TGGTGGTAAGATCGCTTGACATCAATACAGATCCATTTCGACCTCAAGAGAATGATGAAGAGCTTCTTGGTGATGAAACTCCTTATCTTAGTGCGATCGGGGCACTAATGTACCTTGCTAACAATACTCGACCAGATATCTGTTTTGCAGTAAGTCTACTGGCAAGATTCAGTTCCTCCCCAACAAAAAGACATTGGAATGGTGTTAAACACATACTTCGATATCTTCGAGGGACCATGGACATGGGTTTATTCTATTCCAATGAATCCAAATCAGAACTGATTGGTTACGCAGATGCAGGGTATTTATCAGATCCGCATAAAGCCCGATCACAAACAGGCTATTTGTTTACATGTGGAGACACGGCAATATCTTGGCGATCAATGAAGCAAACGTTGGTAGCCACTTCTTCAAATCATGCAGAAATAATAGCCATCCATGAAGCAAGTCGAGAGTGCGTCTGGTTGAGATCAATGACCCATCATATTCAGGAAATGTGTGGTTTTTCTTTGAAAAAGAATATACCACCCTTATTGTCCGAAGATAATGCTGCATGTATAGCTCAATTGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E200850" ref_strand="+" ref_description="SGN-E200850 [cLEC-5-I1]">
      <seq>tttatcagatccgcataaagcccgatcacaaacaggctatttgtttacatgtggagacacggcaatatcttggcgatcaatgaagcaaacgttggtagccacttcttcaaatcatgcagaaataatagccatccatgaagcaagtcgagagtgcgtctggttgagatcaatgacccatcatattcaggaaatgtgtggtttttctttgaaaaagaatataccaaccacaatgcacgaagataatgctgcatgtatagctcaattgaaaggaggatacatcaaaggagaccggacaaagcatatctcaccaaagttctttttcacgcatgatctttaacaaaatggtgagatagaagttcaacaaattcgttcaagtgataatcttgctgatttattcac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="+" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="70510" stop="71508"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70810" g_stop="71208" g_length="399"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="399" r_length="399" r_score="0.982"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="+" ref_id="SGN-E200850" ref_strand="+">
        <total_alignment_score>0.982</total_alignment_score>
        <cumulative_length_of_scored_exons>399</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E200850" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70810" e_stop="71208"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTATCAGATCCACATAAAGCTCGATCACAAACAGGCTATTTGTTTACATGTGGAGACACGGCAATATCTTGGCGATCAATGAAGCAAACATTGGTAGCCACTTCTTCAAATCATGCAGAAATAATAGCCATCCATGAAGCAAGTCGAGAGTGTGTCTGGTTGAGATCAATGACCCATCATATTCAGAAAATGTGTGGTTTTTCTTTGAAAAAGAATATACCAACCACAATGTACGAAGATAATGCTGCATGTATAGCTCAATTGAAAGGAGGATACATCAAAGGAGACCGGACAAAGCATATCTCACCAAAGTTCTTTTTCACGCATGATCTTCAACAAAATGGTGAGATAGAAGTTCAACAAATTCGTTCAAGTGATAATCTTGCTGATTTATTCAC</genome_strand>
        <mrna_strand>TTTATCAGATCCGCATAAAGCCCGATCACAAACAGGCTATTTGTTTACATGTGGAGACACGGCAATATCTTGGCGATCAATGAAGCAAACGTTGGTAGCCACTTCTTCAAATCATGCAGAAATAATAGCCATCCATGAAGCAAGTCGAGAGTGCGTCTGGTTGAGATCAATGACCCATCATATTCAGGAAATGTGTGGTTTTTCTTTGAAAAAGAATATACCAACCACAATGCACGAAGATAATGCTGCATGTATAGCTCAATTGAAAGGAGGATACATCAAAGGAGACCGGACAAAGCATATCTCACCAAAGTTCTTTTTCACGCATGATCTTTAACAAAATGGTGAGATAGAAGTTCAACAAATTCGTTCAAGTGATAATCTTGCTGATTTATTCAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E351886" ref_strand="+" ref_description="SGN-E351886 [cTOS-8-D9]">
      <seq>ggaaatgtgtggtttttctttgaaaaagaatataccaaccacaatgtacgaagataatgctgcatgtatagctcaattgaaaggaggatacatcaaaggagaccggacaaagcatatctcaccaaagttctttttcacgcatgatcttcaacaaaatggtgagatagaagttcaacaaattcgttcaagtgataatcttgctgatttattcacaaaggcattgccaacatcaacgtttgagaagttgagatacaagattggaatgcgccgtctccaagatatcaagtaaagttttcatcagggggagtgaaatacgcgttgtactcttttccttaactatgggtttgtcccaagttgggttttcctggtaagggttttaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="+" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="70696" stop="71676"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70996" g_stop="71376" g_length="381"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="381" r_length="381" r_score="0.982"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="+" ref_id="SGN-E351886" ref_strand="+">
        <total_alignment_score>0.982</total_alignment_score>
        <cumulative_length_of_scored_exons>381</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E351886" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70996" e_stop="71376"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAAATGTGTGGTTTTTCTTTGAAAAAGAATATACCAACCACAATGTACGAAGATAATGCTGCATGTATAGCTCAATTGAAAGGAGGATACATCAAAGGAGACCGGACAAAGCATATCTCACCAAAGTTCTTTTTCACGCATGATCTTCAACAAAATGGTGAGATAGAAGTTCAACAAATTCGTTCAAGTGATAATCTTGCTGATTTATTCACTAAGGCATTGCCAACATCAACATTTGAGAAGTTGAGATACAAGATTGGAATGCGCCGTCTCCGAGATATCAAGTAAAGTTTTCATCAGGGGGAGCGAAATACGCGTTGTACTCTTTTCCTTAACTATGGTTTTGTCCCAAGTTGGGTTTTCCTGGTAAGGTTTTTAAT</genome_strand>
        <mrna_strand>GGAAATGTGTGGTTTTTCTTTGAAAAAGAATATACCAACCACAATGTACGAAGATAATGCTGCATGTATAGCTCAATTGAAAGGAGGATACATCAAAGGAGACCGGACAAAGCATATCTCACCAAAGTTCTTTTTCACGCATGATCTTCAACAAAATGGTGAGATAGAAGTTCAACAAATTCGTTCAAGTGATAATCTTGCTGATTTATTCACAAAGGCATTGCCAACATCAACGTTTGAGAAGTTGAGATACAAGATTGGAATGCGCCGTCTCCAAGATATCAAGTAAAGTTTTCATCAGGGGGAGTGAAATACGCGTTGTACTCTTTTCCTTAACTATGGGTTTGTCCCAAGTTGGGTTTTCCTGGTAAGGGTTTTAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E692656" ref_strand="+" ref_description="SGN-E692656 [LH_Ea09E14]">
      <seq>cgttttcctgttgcctacagaagggtaccctgcagaagaagcggaggaattagatttacaatcaatggccactcttacttcaacttggttcttgtaacaaatgttggaggttcaggggatgtacattcagtatacataaagggttcaagaactcaatggcaaccaatgtcaagaaattggggccaaaattggcagaataacgcttaccttaacggccaaagcttgtcctttaaggtcactacaggcgatggtcgcactgttgtttcatacaatgcagctcctagttcttggtcatttggtcagacattttctggaggacaattccgttaaaacgcaacatatttttacggaaaaaaaattcagaattttcaaagtatactacttactaatatattattctaagagtttggccttaatttgagggttttactcaccaaaatatttggggaaaagcgcagtttggcactttttgtccattgtaaaattggtcattcaattgtggaagtaaaaagaattgatttggcctaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaataaaaaaaaaaacaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="-" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="75757" stop="14132"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="75597" g_stop="75574" g_length="24"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="23" r_length="23" r_score="0.833"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="75573" i_stop="75456" i_length="118">
            <donor d_prob="0.999" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="75455" g_stop="74952" g_length="504"/>
          <reference_exon_boundary r_type="cDNA" r_start="24" r_stop="526" r_length="503" r_score="0.984"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="74951" i_stop="73713" i_length="1239">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.74"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="73712" g_stop="73660" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="527" r_stop="579" r_length="53" r_score="0.755"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="-" ref_id="SGN-E692656" ref_strand="+">
        <total_alignment_score>0.962</total_alignment_score>
        <cumulative_length_of_scored_exons>581</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E692656" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="75597" e_stop="75574"/>
          <exon e_start="75455" e_stop="74952"/>
          <exon e_start="73712" e_stop="73660"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATAGTTCCTGTTGCCTATAGAAGGTAATTTATATTTACCCTTCTCTTTATATCGAAATTGAAACTGAGAAAGAGTATGTTCTCATAGACCGAAAAGTTTATTTGTTTATGGTAACTAAATTATTGTGTTAATGTTTTACAGGGTACCCTGCAGAAGAAGCGGAGGAATTAGATTTACAATCAATGGCCACTCTTACTTCAACTTGGTTCTTGTAACAAATGTTGGAGGTTCAGGGGATGTACATTCAGTATACATAAAGGGTTCAAGAACTCAATGGCAACCAATGTCAAGAAATTGGGGCCAAAATTGGCAGAATAACGCTTACCTTAACGGCCAAAGCTTGTCCTTTAAGGTCACTACAGGCGATGGTCGCACTGTTGTTTCATACAATGCAGCTCCTAGTTCTTGGTCATTTGGTCAGACATTTTCTGGAGGACAATTCCGTTAAAACGCAACATATTCTTTAAGAAAAAAAAATCAGAATTTTCAAAGTATACTACTTGCTAATATATTATTCTAAGAGTTTTGCCTTAAATTTGAGGGTTTTACTCACCAAAATATTTGGGGAAAAGCGCAGTTTGGCACTTTTTGTCCATTGTAAAATTGGTCATTCAATTGTGGAAGTAAAAAGAATTGATTTGGCCTACTCTTTTTTGGGTGGTTATTAACGTTTAGGGGGCGGCAGTTGTGAGCTTTTACTGCTCAATTTAATAGTATAAATAGCATTTACGGTATTGTGTGCATAGAAGAAAAATATCTATTTTTTTTTTTTACTGCAAAAGAGCTAAGCACTAATTATGGTGAGTATGTATGTACCAATTGTCTCTAGCTATTTGTTTGTAAGAAAATGTTACTATAATAATAAAAGGAAACTCCAAGTTGTACTAGGTGCAATGTCTTATAAAGAGCATTCTCTACCTTACCATTTCTTAATGATGTCTTCTTCTAAATATGAGAGTTTTTACTATAAAAATGCATCAATCTCAAATAAATTATAGTAGATATACAAATTTTTAACATTTTTTTTCTTTTTTTCGAGTGAGGTGAGAAAAGTAGAGGAAGTTGAAACGGAAGAAATACGTAAATAATTATGGATGGTCCACTAACTTAACTAAGTAGAACGAATTGACAATCTCGAATTTATTCGATCATAATAATGATTTAAAACTCCACCTACAAGAAATAATTTTTCACATTATTCCTTAAAAAAAAAAAAAGAGAAAGCAATAGTATTTAGATAAGTAGTTATGTATTTAGATAAAATTGTCAAAGTTAAAAAAAATTGTTGATGTGTTTGACAAATAAGTGCTGGTAACACTTTTTTTTTAATCAAAATGTCTGAAATATACCCTTAAAAGTTGTTAACATGATAAAAAATGATTAATTTAATAATAATAATAATAAATAATATATAATAATAATAAAGAATAATAATAATAATAAAAAAATAAAAAAATATTAATAATGATATATAATAATAATAATATATAATAATAATAATAAATAAAATAAATAATAATAATAATAATAAATAATTAAATATAAATAATAATAATAATATAACAATATGAAAATAATAATAATAATAATTATTATTATTATATGATATATATATAATAATAATAATAGTAATAATAATAATAATAAATAATAATAATAATATATAAAGTATTATTATTAATAATAAATAATAATATATAATAATCATAGATAATAATAATAAAATAATATGGAAATAATATAATAACAATATAATAATAATATATAATAATAATAATAATAAAGAATAATAAAATAAATAATAATAATAATAACAATAATAATAATATATAATAATAATAATAAAGAATAATAAAATAAATAATAATAATAATAATAAGATAAAATAATAATTGAAAAAAATTAAAAATAAATAAACCATAAAAATAAAAATAAAA</genome_strand>
        <mrna_strand>CGT-TTTCCTGTTGCCTACAGAAG......................................................................................................................GGTACCCTGCAGAAGAAGCGGAGGAATTAGATTTACAATCAATGGCCACTCTTACTTCAACTTGGTTCTTGTAACAAATGTTGGAGGTTCAGGGGATGTACATTCAGTATACATAAAGGGTTCAAGAACTCAATGGCAACCAATGTCAAGAAATTGGGGCCAAAATTGGCAGAATAACGCTTACCTTAACGGCCAAAGCTTGTCCTTTAAGGTCACTACAGGCGATGGTCGCACTGTTGTTTCATACAATGCAGCTCCTAGTTCTTGGTCATTTGGTCAGACATTTTCTGGAGGACAATTCCGTTAAAACGCAACATATTTTTACGGAAAAAAAATTCAGAATTTTCAAAGTATACTACTTACTAATATATTATTCTAAGAGTTTGGCCTT-AATTTGAGGGTTTTACTCACCAAAATATTTGGGGAAAAGCGCAGTTTGGCACTTTTTGTCCATTGTAAAATTGGTCATTCAATTGTGGAAGTAAAAAGAATTGATTTGGCCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAAAAAAAAAAACAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E367088" ref_strand="-" ref_description="SGN-E367088 [cLPT-5-G4]">
      <seq>aaaaaaaatttcagaattttcaaagtatactacttactaatatattattctaagagtttggccttaatttgagggttttactcaccaaaatatttggggaaaagcgcagtttggcactttttgtccattgtaaaattggtcattcaattgtggaagtaaaaagaattgatttggcctactcttttttgggtggtaattaacgtttagggggcggcagttgtgagcttttactgctcactttaatagtataaatagcatttacagtattgtgtgcatagaagaaaaatatctattttttttttactgcaaaagagctaagcactaattatggtgagtatgtatgtaccaattgtctctagctatttgtttgtaagaaaatgttactataataataaaaggaaactcaaagttgtactaggtgcaatgtcttataaagagcattctctaccttaccatttcttaatgatgtcttcttgtaaatatgagagtttttactataaaaaaaaaaaaaaaaaactcgagactag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="-" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="75428" stop="74324"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="75129" g_stop="74625" g_length="505"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="502" r_length="502" r_score="0.974"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="503" polyA_stop="517"/>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="-" ref_id="SGN-E367088" ref_strand="-">
        <total_alignment_score>0.974</total_alignment_score>
        <cumulative_length_of_scored_exons>505</cumulative_length_of_scored_exons>
        <coverage percentage="0.958" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E367088" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="75129" e_stop="74625"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAAAAAAAATCAGAATTTTCAAAGTATACTACTTGCTAATATATTATTCTAAGAGTTTTGCCTTAAATTTGAGGGTTTTACTCACCAAAATATTTGGGGAAAAGCGCAGTTTGGCACTTTTTGTCCATTGTAAAATTGGTCATTCAATTGTGGAAGTAAAAAGAATTGATTTGGCCTACTCTTTTTTGGGTGGTTATTAACGTTTAGGGGGCGGCAGTTGTGAGCTTTTACTGCTCAATTTAATAGTATAAATAGCATTTACGGTATTGTGTGCATAGAAGAAAAATATCTATTTTTTTTTTTTACTGCAAAAGAGCTAAGCACTAATTATGGTGAGTATGTATGTACCAATTGTCTCTAGCTATTTGTTTGTAAGAAAATGTTACTATAATAATAAAAGGAAACTCCAAGTTGTACTAGGTGCAATGTCTTATAAAGAGCATTCTCTACCTTACCATTTCTTAATGATGTCTTCTTCTAAATATGAGAGTTTTTACTATAAAA</genome_strand>
        <mrna_strand>AAAAAAAATTTCAGAATTTTCAAAGTATACTACTTACTAATATATTATTCTAAGAGTTTGGCCTT-AATTTGAGGGTTTTACTCACCAAAATATTTGGGGAAAAGCGCAGTTTGGCACTTTTTGTCCATTGTAAAATTGGTCATTCAATTGTGGAAGTAAAAAGAATTGATTTGGCCTACTCTTTTTTGGGTGGTAATTAACGTTTAGGGGGCGGCAGTTGTGAGCTTTTACTGCTCACTTTAATAGTATAAATAGCATTTACAGTATTGTGTGCATAGAAGAAAAATATCTA--TTTTTTTTTTACTGCAAAAGAGCTAAGCACTAATTATGGTGAGTATGTATGTACCAATTGTCTCTAGCTATTTGTTTGTAAGAAAATGTTACTATAATAATAAAAGGAAACTCAAAGTTGTACTAGGTGCAATGTCTTATAAAGAGCATTCTCTACCTTACCATTTCTTAATGATGTCTTCTTGTAAATATGAGAGTTTTTACTATAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E393469" ref_strand="+" ref_description="SGN-E393469 [TUS-38-E22](-)">
      <seq>aaaaaaaatcagaattttcaaagtatattacctcctactacacttattttaagagttttgccttaaaaaagagggttttactcaccaaaatatttggggaaaagcgcagtttggcactttttgtccattgtaaaattggtcattcaattgtggaagtaaaaagaattgatttggcctactcttttttgggtggttattaacgtttagggggcggcagttgtgagcttttactgctcaatttaatagtataaatagcatttacggtattgtgtgcatagaagaaaaatatctattttttttttttactgcaaaagagctaagcactaattatggtgagtatgtatgtaccaattgtctctagctattaatttgtaagaaaatgttactataataataaaaggaaactccaagttgtactaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="-" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="75427" stop="74410"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="75127" g_stop="74700" g_length="428"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="429" r_length="429" r_score="0.951"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="-" ref_id="SGN-E393469" ref_strand="+">
        <total_alignment_score>0.951</total_alignment_score>
        <cumulative_length_of_scored_exons>428</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E393469" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="75127" e_stop="74700"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAAAAATCAGAATTTTCAAAGTATACTACTTGCTAATATA-TTATTCTAAGAGTTTTGCCTTAAATTTGAGGGTTTTACTCACCAAAATATTTGGGGAAAAGCGCAGTTTGGCACTTTTTGTCCATTGTAAAATTGGTCATTCAATTGTGGAAGTAAAAAGAATTGATTTGGCCTACTCTTTTTTGGGTGGTTATTAACGTTTAGGGGGCGGCAGTTGTGAGCTTTTACTGCTCAATTTAATAGTATAAATAGCATTTACGGTATTGTGTGCATAGAAGAAAAATATCTATTTTTTTTTTTTACTGCAAAAGAGCTAAGCACTAATTATGGTGAGTATGTATGTACCAATTGTCTCTAGCTATTTGTTTGTAAGAAAATGTTACTATAATAATAAAAGGAAACTCCAAGTTGTACTAGGTGCAATGT</genome_strand>
        <mrna_strand>AAAAAAAATCAGAATTTTCAAAGTATATTACCTCCTACTACACTTATTTTAAGAGTTTTGCCTTAAAAAAGAGGGTTTTACTCACCAAAATATTTGGGGAAAAGCGCAGTTTGGCACTTTTTGTCCATTGTAAAATTGGTCATTCAATTGTGGAAGTAAAAAGAATTGATTTGGCCTACTCTTTTTTGGGTGGTTATTAACGTTTAGGGGGCGGCAGTTGTGAGCTTTTACTGCTCAATTTAATAGTATAAATAGCATTTACGGTATTGTGTGCATAGAAGAAAAATATCTATTTTTTTTTTTTACTGCAAAAGAGCTAAGCACTAATTATGGTGAGTATGTATGTACCAATTGTCTCTAGCTATTAATTTGTAAGAAAATGTTACTATAATAATAAAAGGAAACTCCAAGTTGTACTAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E393805" ref_strand="+" ref_description="SGN-E393805 [TUS-14-K1](-)">
      <seq>acaaatgttggaggttcaggggatgtacattcagtatacataaagggttcaagaactcaatggcaaccaatgtcaagaaattggggccaaaattggcagaataacgcttaccttaacggccaaagcttgtcctttaaggtcactacaggcgatggtcgcactgttgtttcatacaatgcagctcctagttcttggtcatttggtcagacattttctggaggacaattccgttaaaacgcaacatattctttaagaaaaaaaaatcagaattttcaaagtatactacttgctaatatattattctaagagttttgccttaaatttgagggttttactcaccaaaatatttggggaaaagcgcagtttggcactttttgtccattgtaaaattggtcattcaattgtggaagtaaaaagaattgatttggcctactcttttttgggtggttattaacgtttagggggcggcagttgtgagcttttactgctcaatttaatagtataaatagcatttacggtattgtgtgcatagaagaaaaatatctatttttttttttactgcaaaagagctaagcactaattatggtgagtatgtatgtaccaattgtctctagctatttgtttgtaagaaaatgttactataataataaaaggaaactccaagttgtactaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="-" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="75682" stop="74410"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="75382" g_stop="74701" g_length="682"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="681" r_length="681" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="-" ref_id="SGN-E393805" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>682</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E393805" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="75382" e_stop="74701"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAAATGTTGGAGGTTCAGGGGATGTACATTCAGTATACATAAAGGGTTCAAGAACTCAATGGCAACCAATGTCAAGAAATTGGGGCCAAAATTGGCAGAATAACGCTTACCTTAACGGCCAAAGCTTGTCCTTTAAGGTCACTACAGGCGATGGTCGCACTGTTGTTTCATACAATGCAGCTCCTAGTTCTTGGTCATTTGGTCAGACATTTTCTGGAGGACAATTCCGTTAAAACGCAACATATTCTTTAAGAAAAAAAAATCAGAATTTTCAAAGTATACTACTTGCTAATATATTATTCTAAGAGTTTTGCCTTAAATTTGAGGGTTTTACTCACCAAAATATTTGGGGAAAAGCGCAGTTTGGCACTTTTTGTCCATTGTAAAATTGGTCATTCAATTGTGGAAGTAAAAAGAATTGATTTGGCCTACTCTTTTTTGGGTGGTTATTAACGTTTAGGGGGCGGCAGTTGTGAGCTTTTACTGCTCAATTTAATAGTATAAATAGCATTTACGGTATTGTGTGCATAGAAGAAAAATATCTATTTTTTTTTTTTACTGCAAAAGAGCTAAGCACTAATTATGGTGAGTATGTATGTACCAATTGTCTCTAGCTATTTGTTTGTAAGAAAATGTTACTATAATAATAAAAGGAAACTCCAAGTTGTACTAGGTGCAATG</genome_strand>
        <mrna_strand>ACAAATGTTGGAGGTTCAGGGGATGTACATTCAGTATACATAAAGGGTTCAAGAACTCAATGGCAACCAATGTCAAGAAATTGGGGCCAAAATTGGCAGAATAACGCTTACCTTAACGGCCAAAGCTTGTCCTTTAAGGTCACTACAGGCGATGGTCGCACTGTTGTTTCATACAATGCAGCTCCTAGTTCTTGGTCATTTGGTCAGACATTTTCTGGAGGACAATTCCGTTAAAACGCAACATATTCTTTAAGAAAAAAAAATCAGAATTTTCAAAGTATACTACTTGCTAATATATTATTCTAAGAGTTTTGCCTTAAATTTGAGGGTTTTACTCACCAAAATATTTGGGGAAAAGCGCAGTTTGGCACTTTTTGTCCATTGTAAAATTGGTCATTCAATTGTGGAAGTAAAAAGAATTGATTTGGCCTACTCTTTTTTGGGTGGTTATTAACGTTTAGGGGGCGGCAGTTGTGAGCTTTTACTGCTCAATTTAATAGTATAAATAGCATTTACGGTATTGTGTGCATAGAAGAAAAATATCTA-TTTTTTTTTTTACTGCAAAAGAGCTAAGCACTAATTATGGTGAGTATGTATGTACCAATTGTCTCTAGCTATTTGTTTGTAAGAAAATGTTACTATAATAATAAAAGGAAACTCCAAGTTGTACTAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E578424" ref_strand="-" ref_description="SGN-E578424 [LE12DG11]">
      <seq>tcagtatacataaagggttcaagaactcaatggcaaccaatgtcaagaaattggggccaaaattggcagaataacgcttcccttaacggccaaagcttgtcctttaaggtcactacaggcgatggtcgcactgttgtttcatacaatgcagctcctagttcttggtcatttggtcagacattttctggaggccaattccgttaaaacgcaacatattctttaagaaaaaaaaatcagaattttcaaagtatactacttgctaatatattattctaagagttttcccttaaatttgagggttttactccccaaaatatttggggaaaagcgcagtttggccctttttgtccattgtaaaattggtcattcaattgtggaagtaaaaagaattgatttggcctactcttttttgggtggttattaacgtttagggggcgccagttgtgagcttttactgctcaatttaatagtataaataccatttccggtattgtgtgcatacaccaaaaatatctattttttttttttactgcaaaagagctaagccctaattatggtgagtatgtatgtaccaattgtctctagctatttgtttgtaagaaaatgttcctataataataaaaggaaactccaagttgtactaaaaaaaaaaccccaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="-" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="75652" stop="74410"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="75352" g_stop="74709" g_length="644"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="644" r_length="644" r_score="0.978"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="657" polyA_stop="681"/>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="-" ref_id="SGN-E578424" ref_strand="-">
        <total_alignment_score>0.978</total_alignment_score>
        <cumulative_length_of_scored_exons>644</cumulative_length_of_scored_exons>
        <coverage percentage="0.946" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E578424" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="75352" e_stop="74709"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAGTATACATAAAGGGTTCAAGAACTCAATGGCAACCAATGTCAAGAAATTGGGGCCAAAATTGGCAGAATAACGCTTACCTTAACGGCCAAAGCTTGTCCTTTAAGGTCACTACAGGCGATGGTCGCACTGTTGTTTCATACAATGCAGCTCCTAGTTCTTGGTCATTTGGTCAGACATTTTCTGGAGGACAATTCCGTTAAAACGCAACATATTCTTTAAGAAAAAAAAATCAGAATTTTCAAAGTATACTACTTGCTAATATATTATTCTAAGAGTTTTGCCTTAAATTTGAGGGTTTTACTCACCAAAATATTTGGGGAAAAGCGCAGTTTGGCACTTTTTGTCCATTGTAAAATTGGTCATTCAATTGTGGAAGTAAAAAGAATTGATTTGGCCTACTCTTTTTTGGGTGGTTATTAACGTTTAGGGGGCGGCAGTTGTGAGCTTTTACTGCTCAATTTAATAGTATAAATAGCATTTACGGTATTGTGTGCATAGAAGAAAAATATCTATTTTTTTTTTTTACTGCAAAAGAGCTAAGCACTAATTATGGTGAGTATGTATGTACCAATTGTCTCTAGCTATTTGTTTGTAAGAAAATGTTACTATAATAATAAAAGGAAACTCCAAGTTGTACTAG</genome_strand>
        <mrna_strand>TCAGTATACATAAAGGGTTCAAGAACTCAATGGCAACCAATGTCAAGAAATTGGGGCCAAAATTGGCAGAATAACGCTTCCCTTAACGGCCAAAGCTTGTCCTTTAAGGTCACTACAGGCGATGGTCGCACTGTTGTTTCATACAATGCAGCTCCTAGTTCTTGGTCATTTGGTCAGACATTTTCTGGAGGCCAATTCCGTTAAAACGCAACATATTCTTTAAGAAAAAAAAATCAGAATTTTCAAAGTATACTACTTGCTAATATATTATTCTAAGAGTTTTCCCTTAAATTTGAGGGTTTTACTCCCCAAAATATTTGGGGAAAAGCGCAGTTTGGCCCTTTTTGTCCATTGTAAAATTGGTCATTCAATTGTGGAAGTAAAAAGAATTGATTTGGCCTACTCTTTTTTGGGTGGTTATTAACGTTTAGGGGGCGCCAGTTGTGAGCTTTTACTGCTCAATTTAATAGTATAAATACCATTTCCGGTATTGTGTGCATACACCAAAAATATCTATTTTTTTTTTTTACTGCAAAAGAGCTAAGCCCTAATTATGGTGAGTATGTATGTACCAATTGTCTCTAGCTATTTGTTTGTAAGAAAATGTTCCTATAATAATAAAAGGAAACTCCAAGTTGTACTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E363859" ref_strand="-" ref_description="SGN-E363859 [cLPT-10-F12]">
      <seq>catttggtcagacattttctggaggacaattccgttaaaacgcaacatatttttacgggaaaaaaaatttcagaattttcaaagtatactacttactaatatattattctaagagtttggccttaatttgagggttttactcaccaaaatatttggggaaaagcgcagtttggcactttttgtccattgtaaaattggtcattcaattgtggaagtaaaaagaattgatttggcctactcttttttgggtggtaattaacgtttagggggcggcagttgtgagcttttactgctcactttaatagtataaatagcatttacagtattgtgtgcatagaagaaaaatatctattttttttttactgcaaaagagctaagcactaattatggtgagtatgtatgtaccaattgtctctagctatttgtttgtaagaaaatgtttctataataataaaaggaaactcaaagttgtcctaaaaaaaaaaaaaaaaaaaaaaactcgagactagtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="-" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="75486" stop="74410"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="75186" g_stop="74709" g_length="478"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="477" r_length="477" r_score="0.956"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="478" polyA_stop="499"/>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="-" ref_id="SGN-E363859" ref_strand="-">
        <total_alignment_score>0.956</total_alignment_score>
        <cumulative_length_of_scored_exons>478</cumulative_length_of_scored_exons>
        <coverage percentage="0.935" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E363859" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="75186" e_stop="74709"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATTTGGTCAGACATTTTCTGGAGGACAATTCCGTTAAAACGCAACATATTCTT-TAAGAAAAAAAA-ATCAGAATTTTCAAAGTATACTACTTGCTAATATATTATTCTAAGAGTTTTGCCTTAAATTTGAGGGTTTTACTCACCAAAATATTTGGGGAAAAGCGCAGTTTGGCACTTTTTGTCCATTGTAAAATTGGTCATTCAATTGTGGAAGTAAAAAGAATTGATTTGGCCTACTCTTTTTTGGGTGGTTATTAACGTTTAGGGGGCGGCAGTTGTGAGCTTTTACTGCTCAATTTAATAGTATAAATAGCATTTACGGTATTGTGTGCATAGAAGAAAAATATCTATTTTTTTTTTTTACTGCAAAAGAGCTAAGCACTAATTATGGTGAGTATGTATGTACCAATTGTCTCTAGCTATTTGTTTGTAAGAAAATGTTACTATAATAATAAAAGGAAACTCCAAGTTGTACTAG</genome_strand>
        <mrna_strand>CATTTGGTCAGACATTTTCTGGAGGACAATTCCGTTAAAACGCAACATATTTTTACGGGAAAAAAAATTTCAGAATTTTCAAAGTATACTACTTACTAATATATTATTCTAAGAGTTTGGCCTT-AATTTGAGGGTTTTACTCACCAAAATATTTGGGGAAAAGCGCAGTTTGGCACTTTTTGTCCATTGTAAAATTGGTCATTCAATTGTGGAAGTAAAAAGAATTGATTTGGCCTACTCTTTTTTGGGTGGTAATTAACGTTTAGGGGGCGGCAGTTGTGAGCTTTTACTGCTCACTTTAATAGTATAAATAGCATTTACAGTATTGTGTGCATAGAAGAAAAATATCTA--TTTTTTTTTTACTGCAAAAGAGCTAAGCACTAATTATGGTGAGTATGTATGTACCAATTGTCTCTAGCTATTTGTTTGTAAGAAAATGTTTCTATAATAATAAAAGGAAACTCAAAGTTGTCCTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E747613" ref_strand="+" ref_description="SGN-E747613 [GI|4138915]">
      <seq>cttcatttcctaactataccctcgttcctcaagcaaacacatagaaactttatttttttgttcaaaaatggctcttttagctatccttttaatgggaatttccctcatgtttcaatcagcccatggctatggtggttggatcaatgcacatgccactttttacggtggaggagatgcttctggaactatgggtggtgcttgtggttacggaaatttatacagcacgggatacggaacgaacactgctgcgttgagtactgctctgttcaacaacgggttgagctgtggagcgtgttttcagctaatgtgtgtgaatgcggggcagtactgcctgccaggcataattacggtaacagccaccaatttctgtccaccaggaggatggtgtgatcctccacgccctcattttgatctctctcaacctatcttcttgcgcattgctcaatatagagctggcatagttcctgttgcctatagaagggtaccctgcagaagaagcggaggaattagatttacaatcaatggccactcttacttcaacttggttcttgtaacaaatgttggaggttcaggggatgtacattcagtatacataaagggttcaagaactcaatggcaaccaatgtcaagaaattggggccaaaattggcagaataacgcttaccttaacggccaaagcttgtcctttaaggtcactacaggcgatggtcgcactgttgtttcatacaatgcagctcctagttcttggtcatttggtcagacattttctggaggacaattccgttaaaacgcaacatattctttaagaaaaaaaaatcagaattttcaaagtatactacttgctaatatattattctaagagttttgccttaaatttgagggttttactcaccaaaatatttggggaaaagcgcagtttggcactttttgtccattgtaaaattggtcattcaattgtggaagtaaaaagaattgatttggcctactcttttttgggtggttattaacgtttagggggcggcagttgtgagcttttactgctcaatttaatagtataaatagcatttacggtattgtgtgcatagaagaaaaatatctattttttttttttactgcaaaagagctaagcactaattatggtgagtatgtatgtaccaattgtctctagctatttgtttgtaagaaaatgttactataataataaaaggaaactccaagttgtact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="-" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="76518" stop="74411"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76218" g_stop="76160" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="59" r_length="59" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76159" i_stop="76072" i_length="88">
            <donor d_prob="0.404" d_score="1.00"/>
            <acceptor a_prob="0.916" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="76071" g_stop="75940" g_length="132"/>
          <reference_exon_boundary r_type="cDNA" r_start="60" r_stop="191" r_length="132" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="75939" i_stop="75863" i_length="77">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="75862" g_stop="75574" g_length="289"/>
          <reference_exon_boundary r_type="cDNA" r_start="192" r_stop="480" r_length="289" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="75573" i_stop="75456" i_length="118">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="75455" g_stop="74711" g_length="745"/>
          <reference_exon_boundary r_type="cDNA" r_start="481" r_stop="1225" r_length="745" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="-" ref_id="SGN-E747613" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>1225</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E747613" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76218" e_stop="76160"/>
          <exon e_start="76071" e_stop="75940"/>
          <exon e_start="75862" e_stop="75574"/>
          <exon e_start="75455" e_stop="74711"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTCATTTCCTAACTATACCCTCGTTCCTCAAGCAAACACATAGAAACTTTATTTTTTTGTGAGTCATTTTCCCTAGTTGTTCAATTTATTTTTTTTTATAGTAAACTGACTTCATTAGCACTAAACTTTAATTCCATCCCCTGCAGGTTCAAAAATGGCTCTTTTAGCTATCCTTTTAATGGGAATTTCCCTCATGTTTCAATCAGCCCATGGCTATGGTGGTTGGATCAATGCACATGCCACTTTTTACGGTGGAGGAGATGCTTCTGGAACTATGGGTACTACAATTTTTCACTTGAGCCTAAGCTTGTAGTCATGTAAAAAAACTACTGAAATCGTGTGTGGATTTTGACAGGTGGTGCTTGTGGTTACGGAAATTTATACAGCACGGGATACGGAACGAACACTGCTGCGTTGAGTACTGCTCTGTTCAACAACGGGTTGAGCTGTGGAGCGTGTTTTCAGCTAATGTGTGTGAATGCGGGGCAGTACTGCCTGCCAGGCATAATTACGGTAACAGCCACCAATTTCTGTCCACCAGGAGGATGGTGTGATCCTCCACGCCCTCATTTTGATCTCTCTCAACCTATCTTCTTGCGCATTGCTCAATATAGAGCTGGCATAGTTCCTGTTGCCTATAGAAGGTAATTTATATTTACCCTTCTCTTTATATCGAAATTGAAACTGAGAAAGAGTATGTTCTCATAGACCGAAAAGTTTATTTGTTTATGGTAACTAAATTATTGTGTTAATGTTTTACAGGGTACCCTGCAGAAGAAGCGGAGGAATTAGATTTACAATCAATGGCCACTCTTACTTCAACTTGGTTCTTGTAACAAATGTTGGAGGTTCAGGGGATGTACATTCAGTATACATAAAGGGTTCAAGAACTCAATGGCAACCAATGTCAAGAAATTGGGGCCAAAATTGGCAGAATAACGCTTACCTTAACGGCCAAAGCTTGTCCTTTAAGGTCACTACAGGCGATGGTCGCACTGTTGTTTCATACAATGCAGCTCCTAGTTCTTGGTCATTTGGTCAGACATTTTCTGGAGGACAATTCCGTTAAAACGCAACATATTCTTTAAGAAAAAAAAATCAGAATTTTCAAAGTATACTACTTGCTAATATATTATTCTAAGAGTTTTGCCTTAAATTTGAGGGTTTTACTCACCAAAATATTTGGGGAAAAGCGCAGTTTGGCACTTTTTGTCCATTGTAAAATTGGTCATTCAATTGTGGAAGTAAAAAGAATTGATTTGGCCTACTCTTTTTTGGGTGGTTATTAACGTTTAGGGGGCGGCAGTTGTGAGCTTTTACTGCTCAATTTAATAGTATAAATAGCATTTACGGTATTGTGTGCATAGAAGAAAAATATCTATTTTTTTTTTTTACTGCAAAAGAGCTAAGCACTAATTATGGTGAGTATGTATGTACCAATTGTCTCTAGCTATTTGTTTGTAAGAAAATGTTACTATAATAATAAAAGGAAACTCCAAGTTGTACT</genome_strand>
        <mrna_strand>CTTCATTTCCTAACTATACCCTCGTTCCTCAAGCAAACACATAGAAACTTTATTTTTTT........................................................................................GTTCAAAAATGGCTCTTTTAGCTATCCTTTTAATGGGAATTTCCCTCATGTTTCAATCAGCCCATGGCTATGGTGGTTGGATCAATGCACATGCCACTTTTTACGGTGGAGGAGATGCTTCTGGAACTATGG.............................................................................GTGGTGCTTGTGGTTACGGAAATTTATACAGCACGGGATACGGAACGAACACTGCTGCGTTGAGTACTGCTCTGTTCAACAACGGGTTGAGCTGTGGAGCGTGTTTTCAGCTAATGTGTGTGAATGCGGGGCAGTACTGCCTGCCAGGCATAATTACGGTAACAGCCACCAATTTCTGTCCACCAGGAGGATGGTGTGATCCTCCACGCCCTCATTTTGATCTCTCTCAACCTATCTTCTTGCGCATTGCTCAATATAGAGCTGGCATAGTTCCTGTTGCCTATAGAAG......................................................................................................................GGTACCCTGCAGAAGAAGCGGAGGAATTAGATTTACAATCAATGGCCACTCTTACTTCAACTTGGTTCTTGTAACAAATGTTGGAGGTTCAGGGGATGTACATTCAGTATACATAAAGGGTTCAAGAACTCAATGGCAACCAATGTCAAGAAATTGGGGCCAAAATTGGCAGAATAACGCTTACCTTAACGGCCAAAGCTTGTCCTTTAAGGTCACTACAGGCGATGGTCGCACTGTTGTTTCATACAATGCAGCTCCTAGTTCTTGGTCATTTGGTCAGACATTTTCTGGAGGACAATTCCGTTAAAACGCAACATATTCTTTAAGAAAAAAAAATCAGAATTTTCAAAGTATACTACTTGCTAATATATTATTCTAAGAGTTTTGCCTTAAATTTGAGGGTTTTACTCACCAAAATATTTGGGGAAAAGCGCAGTTTGGCACTTTTTGTCCATTGTAAAATTGGTCATTCAATTGTGGAAGTAAAAAGAATTGATTTGGCCTACTCTTTTTTGGGTGGTTATTAACGTTTAGGGGGCGGCAGTTGTGAGCTTTTACTGCTCAATTTAATAGTATAAATAGCATTTACGGTATTGTGTGCATAGAAGAAAAATATCTATTTTTTTTTTTTACTGCAAAAGAGCTAAGCACTAATTATGGTGAGTATGTATGTACCAATTGTCTCTAGCTATTTGTTTGTAAGAAAATGTTACTATAATAATAAAAGGAAACTCCAAGTTGTACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E716402" ref_strand="+" ref_description="SGN-E716402 [FB16DG11]">
      <seq>gttttacagggtaccctgcagaagaagcggaggaattagatttacaatcaatggccactcttacttcaacttggttcttgtaacaaatgttggaggttcaggggatgtacattcagtatacataaagggttcaagaactcaatggcaaccaatgtcaagaaattggggccaaaattggcagaataacgcttaccttaacggccaaagcttgtcctttaaggtcactacaggcgatggtcgcactgttgtttcatacaatgcagctcctagttcttggtcatttggtcagacattttctggaggacaattccgttaaaacgcaacatattctttaagaaaaaaaaatcagaattttcaaagtatactacttgctaatatattattctaagagttttgccttaaatttgagggttttactcaccaaaatatttggggaaaagcgcagtttggcactttttgtccattgtaaaattggtcattcaattgtggaagtaaaaagaattgatttggcctactcttttttgggtggttattaacgtttagggggcggcagttgtgagcttttactgctcaatttaatagtataaatagcatttacggtattgtgtgcatagaagaaaaatatctattttttttttttactgcaaaagagctaagcactaattatggtgagtatgtatgtaccaattgtctctagctatttgtttgtaagaaaatgttactataataataaaaggaaactccaagttgtac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="-" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="75764" stop="74412"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="75464" g_stop="74712" g_length="753"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="753" r_length="753" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="-" ref_id="SGN-E716402" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>753</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E716402" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="75464" e_stop="74712"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTTACAGGGTACCCTGCAGAAGAAGCGGAGGAATTAGATTTACAATCAATGGCCACTCTTACTTCAACTTGGTTCTTGTAACAAATGTTGGAGGTTCAGGGGATGTACATTCAGTATACATAAAGGGTTCAAGAACTCAATGGCAACCAATGTCAAGAAATTGGGGCCAAAATTGGCAGAATAACGCTTACCTTAACGGCCAAAGCTTGTCCTTTAAGGTCACTACAGGCGATGGTCGCACTGTTGTTTCATACAATGCAGCTCCTAGTTCTTGGTCATTTGGTCAGACATTTTCTGGAGGACAATTCCGTTAAAACGCAACATATTCTTTAAGAAAAAAAAATCAGAATTTTCAAAGTATACTACTTGCTAATATATTATTCTAAGAGTTTTGCCTTAAATTTGAGGGTTTTACTCACCAAAATATTTGGGGAAAAGCGCAGTTTGGCACTTTTTGTCCATTGTAAAATTGGTCATTCAATTGTGGAAGTAAAAAGAATTGATTTGGCCTACTCTTTTTTGGGTGGTTATTAACGTTTAGGGGGCGGCAGTTGTGAGCTTTTACTGCTCAATTTAATAGTATAAATAGCATTTACGGTATTGTGTGCATAGAAGAAAAATATCTATTTTTTTTTTTTACTGCAAAAGAGCTAAGCACTAATTATGGTGAGTATGTATGTACCAATTGTCTCTAGCTATTTGTTTGTAAGAAAATGTTACTATAATAATAAAAGGAAACTCCAAGTTGTAC</genome_strand>
        <mrna_strand>GTTTTACAGGGTACCCTGCAGAAGAAGCGGAGGAATTAGATTTACAATCAATGGCCACTCTTACTTCAACTTGGTTCTTGTAACAAATGTTGGAGGTTCAGGGGATGTACATTCAGTATACATAAAGGGTTCAAGAACTCAATGGCAACCAATGTCAAGAAATTGGGGCCAAAATTGGCAGAATAACGCTTACCTTAACGGCCAAAGCTTGTCCTTTAAGGTCACTACAGGCGATGGTCGCACTGTTGTTTCATACAATGCAGCTCCTAGTTCTTGGTCATTTGGTCAGACATTTTCTGGAGGACAATTCCGTTAAAACGCAACATATTCTTTAAGAAAAAAAAATCAGAATTTTCAAAGTATACTACTTGCTAATATATTATTCTAAGAGTTTTGCCTTAAATTTGAGGGTTTTACTCACCAAAATATTTGGGGAAAAGCGCAGTTTGGCACTTTTTGTCCATTGTAAAATTGGTCATTCAATTGTGGAAGTAAAAAGAATTGATTTGGCCTACTCTTTTTTGGGTGGTTATTAACGTTTAGGGGGCGGCAGTTGTGAGCTTTTACTGCTCAATTTAATAGTATAAATAGCATTTACGGTATTGTGTGCATAGAAGAAAAATATCTATTTTTTTTTTTTACTGCAAAAGAGCTAAGCACTAATTATGGTGAGTATGTATGTACCAATTGTCTCTAGCTATTTGTTTGTAAGAAAATGTTACTATAATAATAAAAGGAAACTCCAAGTTGTAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E432761" ref_strand="+" ref_description="SGN-E432761 [STM-57-D9]">
      <seq>acgggcccccctcgagtntttatctttaatttgtttagaaaacttggagttcccttttattattatagtaacattttcttacaaacaaatagctagagacaattggtacatacatactcagcataattagtgcttagctcttttacattaaaaaaaaaagtagatatttttcttctatgcaaacaatattgtaatgctatttatactattaaattgagcagtaaaagcccacaactgccgccccctaaacgttaataaccacccaaaaaaaagtaggccgaataaattctttttacttccacaattgaatgaccaattttacaatggacaaaaagtgccaaactgcgcttttcccaaatattttggtgagtaaaacccttaaattaaggccaaactcttagaataatatttaaaaaattaaatattttagtaagtagtatacttgaaaattctgattttttttttcgcaaaatatttgcgttctaacggaattgtcctccagaaaatgtctgaccaaaagaccaagaactaggagctgcattgtatgaaacaacagtgcgaccatcgcctgtagtgaccttaaaggacaggctttggccgttaaggtaagcgttattctgccaattttggccccaatttcttgacattggttgccattgagttcttgaacccttgatgtatagtgagtgtacatctcctgcacctccaacatttgttacaagaaccaagttgaagtaagagtggccattgattgtaaatctaattccctcacttcttctgcagggtactcttctgtaggc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="+" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="74410" stop="75757"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="74716" g_stop="75457" g_length="742"/>
          <reference_exon_boundary r_type="cDNA" r_start="41" r_stop="791" r_length="751" r_score="0.906"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="+" ref_id="SGN-E432761" ref_strand="+">
        <total_alignment_score>0.906</total_alignment_score>
        <cumulative_length_of_scored_exons>742</cumulative_length_of_scored_exons>
        <coverage percentage="0.928" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E432761" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="74716" e_stop="75457"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACTTGGAGTTTCCTTTTATTATTATAGTAACATTTTCTTACAAACAAATAGCTAGAGACAATTGGTACATACATACTCACCATAATTAGTGCTTAGCTCTTTTGCAGTAAAAAAAAAAAATAGATATTTTTCTTCTATGCACACAATACCGTAAATGCTATTTATACTATTAAATTGAGCAGTAAAAGCTCACAACTGCCGCCCCCTAAACGTTAATAACCACCCAAAAAAGAGTAGGCCAAATCAATTCTTTTTACTTCCACAATTGAATGACCAATTTTACAATGGACAAAAAGTGCCAAACTGCGCTTTTCCCCAAATATTTTGGTGAGTAAAACCCTCAAATTTAAGGCAAAACTCTTAGAATAATA--T-----ATT-AGCA----AGT-AGTA-TA-CTTTGAAAATTCTGATTTTTTTTTCTTAAAGAATATGTTGCGTTTTAACGGAATTGTCCTCCAGAAAATGTCTGACCAAATGACCAAGAACTAGGAGCTGCATTGTATGAAACAACAGTGCGACCATCGCCTGTAGTGACCTTAAAGGACAAGCTTTGGCCGTTAAGGTAAGCGTTATTCTGCCAATTTTGGCCCCAATTTCTTGACATTGGTTGCCATTGAGTTCTTGAACCCTTTATGTATACTGAATGTACATCCCCTGAACCTCCAACATTTGTTACAAGAACCAAGTTGAAGTAAGAGTGGCCATTGATTGTAAATCTAATTCCTCCGCTTCTTCTGCAGGGTACCCT</genome_strand>
        <mrna_strand>AACTTGGAGTTCCCTTTTATTATTATAGTAACATTTTCTTACAAACAAATAGCTAGAGACAATTGGTACATACATACTCAGCATAATTAGTGCTTAGCTCTTTTACA-TTAAAAAAAAAAGTAGATATTTTTCTTCTATGCAAACAATATTGT-AATGCTATTTATACTATTAAATTGAGCAGTAAAAGCCCACAACTGCCGCCCCCTAAACGTTAATAACCACCCAAAAAAAAGTAGGCCGAATAAATTCTTTTTACTTCCACAATTGAATGACCAATTTTACAATGGACAAAAAGTGCCAAACTGCGCTTTT-CCCAAATATTTTGGTGAGTAAAACCCTTAAA-TTAAGGCCAAACTCTTAGAATAATATTTAAAAAATTAAATATTTTAGTAAGTAGTATACTTGAAAATTCTGATTTTTTTTT-TCGCAAAATAT-TTGCGTTCTAACGGAATTGTCCTCCAGAAAATGTCTGACCAAAAGACCAAGAACTAGGAGCTGCATTGTATGAAACAACAGTGCGACCATCGCCTGTAGTGACCTTAAAGGACAGGCTTTGGCCGTTAAGGTAAGCGTTATTCTGCCAATTTTGGCCCCAATTTCTTGACATTGGTTGCCATTGAGTTCTTGAACCCTTGATGTATAGTGAGTGTACATCTCCTGCACCTCCAACATTTGTTACAAGAACCAAGTTGAAGTAAGAGTGGCCATTGATTGTAAATCTAATTCCCTCACTTCTTCTGCAGGGTACTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E244787" ref_strand="+" ref_description="SGN-E244787 [cLED-38-J14]">
      <seq>aacgcttaccttaacggccaaagcttgtcctttaaggtcactacaggcgatggtcgcactgttgtttcatacaatgcagctcctagttcttggtcatttggtcagacattttctggaggacaattccgttaaaacgcaacatattctttaagaaaaaaaaatcagaattttcaaagtatactacttgctaatatattattctaagagttttgccttaaatttgagggttttactcaccaaaatatttggggaaaagcgcagtttggcactttttgtccattgtaaaattggtcattcaattgtggaagtaaaaagaattgatttggcctactcttttttgggtggttattaacgtttagggggcggcagttgtgagcttttactgctcaatttaatagtataaatagcatttacggtattgtgtgcatagaagaaaaatatctattttttttttttactgcaaaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="-" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="75580" stop="74515"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="75280" g_stop="74815" g_length="466"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="466" r_length="466" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="-" ref_id="SGN-E244787" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>466</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E244787" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="75280" e_stop="74815"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACGCTTACCTTAACGGCCAAAGCTTGTCCTTTAAGGTCACTACAGGCGATGGTCGCACTGTTGTTTCATACAATGCAGCTCCTAGTTCTTGGTCATTTGGTCAGACATTTTCTGGAGGACAATTCCGTTAAAACGCAACATATTCTTTAAGAAAAAAAAATCAGAATTTTCAAAGTATACTACTTGCTAATATATTATTCTAAGAGTTTTGCCTTAAATTTGAGGGTTTTACTCACCAAAATATTTGGGGAAAAGCGCAGTTTGGCACTTTTTGTCCATTGTAAAATTGGTCATTCAATTGTGGAAGTAAAAAGAATTGATTTGGCCTACTCTTTTTTGGGTGGTTATTAACGTTTAGGGGGCGGCAGTTGTGAGCTTTTACTGCTCAATTTAATAGTATAAATAGCATTTACGGTATTGTGTGCATAGAAGAAAAATATCTATTTTTTTTTTTTACTGCAAAAG</genome_strand>
        <mrna_strand>AACGCTTACCTTAACGGCCAAAGCTTGTCCTTTAAGGTCACTACAGGCGATGGTCGCACTGTTGTTTCATACAATGCAGCTCCTAGTTCTTGGTCATTTGGTCAGACATTTTCTGGAGGACAATTCCGTTAAAACGCAACATATTCTTTAAGAAAAAAAAATCAGAATTTTCAAAGTATACTACTTGCTAATATATTATTCTAAGAGTTTTGCCTTAAATTTGAGGGTTTTACTCACCAAAATATTTGGGGAAAAGCGCAGTTTGGCACTTTTTGTCCATTGTAAAATTGGTCATTCAATTGTGGAAGTAAAAAGAATTGATTTGGCCTACTCTTTTTTGGGTGGTTATTAACGTTTAGGGGGCGGCAGTTGTGAGCTTTTACTGCTCAATTTAATAGTATAAATAGCATTTACGGTATTGTGTGCATAGAAGAAAAATATCTATTTTTTTTTTTTACTGCAAAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E731100" ref_strand="+" ref_description="SGN-E731100 [LA26AE10]">
      <seq>gagggttgagtactgctctgttcaacaacgggttgagctgtggagcgtgttttcagctaatgtgtgtgaatgcggggcagtactgcctgccaggcataattacggtaacagccaccaatttctgtccaccaggaggatggtgtgatcctccacgccctcattttgatctctctcaacctatcttcttgcgcattgctcaatatagagctggcatagttcctgttgcctatagaagggtaccctgcagaagaagcggaggaattagatttacaatcaatggccactcttacttcaacttggttcttgtaacaaatgttggaggttcaggggatgtacattcagtatacataaagggttcaagaactcaatggcaaccaatgtcaagaaattggggccaaaattggcagaataacgcttaccttaacggccaaagcttgtcctttaaggtcactacaggcgatggtcgcactgttgtttcatacaatgcagctcctagttcttggtcatttggtcagacattttctggaggacaattccgttaaaacgcaacatattctttaagaaaaaaaaatcagaattttcaaagtatactacttgctaatatattattctaagagttttgccttaaatttgagggttttactcaccaaaatatttggggaaaagcgcagtttggcactttttgtccattgtaaaattggtcattcaattgtggaagtaaaagaaattgatttggcctactcttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="-" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="76106" stop="74645"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="75808" g_stop="75574" g_length="235"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="235" r_length="235" r_score="0.987"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="75573" i_stop="75456" i_length="118">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="75455" g_stop="74945" g_length="511"/>
          <reference_exon_boundary r_type="cDNA" r_start="236" r_stop="746" r_length="511" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="-" ref_id="SGN-E731100" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>746</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E731100" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="75808" e_stop="75574"/>
          <exon e_start="75455" e_stop="74945"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGCGTTGAGTACTGCTCTGTTCAACAACGGGTTGAGCTGTGGAGCGTGTTTTCAGCTAATGTGTGTGAATGCGGGGCAGTACTGCCTGCCAGGCATAATTACGGTAACAGCCACCAATTTCTGTCCACCAGGAGGATGGTGTGATCCTCCACGCCCTCATTTTGATCTCTCTCAACCTATCTTCTTGCGCATTGCTCAATATAGAGCTGGCATAGTTCCTGTTGCCTATAGAAGGTAATTTATATTTACCCTTCTCTTTATATCGAAATTGAAACTGAGAAAGAGTATGTTCTCATAGACCGAAAAGTTTATTTGTTTATGGTAACTAAATTATTGTGTTAATGTTTTACAGGGTACCCTGCAGAAGAAGCGGAGGAATTAGATTTACAATCAATGGCCACTCTTACTTCAACTTGGTTCTTGTAACAAATGTTGGAGGTTCAGGGGATGTACATTCAGTATACATAAAGGGTTCAAGAACTCAATGGCAACCAATGTCAAGAAATTGGGGCCAAAATTGGCAGAATAACGCTTACCTTAACGGCCAAAGCTTGTCCTTTAAGGTCACTACAGGCGATGGTCGCACTGTTGTTTCATACAATGCAGCTCCTAGTTCTTGGTCATTTGGTCAGACATTTTCTGGAGGACAATTCCGTTAAAACGCAACATATTCTTTAAGAAAAAAAAATCAGAATTTTCAAAGTATACTACTTGCTAATATATTATTCTAAGAGTTTTGCCTTAAATTTGAGGGTTTTACTCACCAAAATATTTGGGGAAAAGCGCAGTTTGGCACTTTTTGTCCATTGTAAAATTGGTCATTCAATTGTGGAAGTAAAAAGAATTGATTTGGCCTACTCTTT</genome_strand>
        <mrna_strand>GAGGGTTGAGTACTGCTCTGTTCAACAACGGGTTGAGCTGTGGAGCGTGTTTTCAGCTAATGTGTGTGAATGCGGGGCAGTACTGCCTGCCAGGCATAATTACGGTAACAGCCACCAATTTCTGTCCACCAGGAGGATGGTGTGATCCTCCACGCCCTCATTTTGATCTCTCTCAACCTATCTTCTTGCGCATTGCTCAATATAGAGCTGGCATAGTTCCTGTTGCCTATAGAAG......................................................................................................................GGTACCCTGCAGAAGAAGCGGAGGAATTAGATTTACAATCAATGGCCACTCTTACTTCAACTTGGTTCTTGTAACAAATGTTGGAGGTTCAGGGGATGTACATTCAGTATACATAAAGGGTTCAAGAACTCAATGGCAACCAATGTCAAGAAATTGGGGCCAAAATTGGCAGAATAACGCTTACCTTAACGGCCAAAGCTTGTCCTTTAAGGTCACTACAGGCGATGGTCGCACTGTTGTTTCATACAATGCAGCTCCTAGTTCTTGGTCATTTGGTCAGACATTTTCTGGAGGACAATTCCGTTAAAACGCAACATATTCTTTAAGAAAAAAAAATCAGAATTTTCAAAGTATACTACTTGCTAATATATTATTCTAAGAGTTTTGCCTTAAATTTGAGGGTTTTACTCACCAAAATATTTGGGGAAAAGCGCAGTTTGGCACTTTTTGTCCATTGTAAAATTGGTCATTCAATTGTGGAAGTAAAAGAAATTGATTTGGCCTACTCTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E354889" ref_strand="+" ref_description="SGN-E354889 [cTOS-19-N6]">
      <seq>ttggttcttgtaacaaatgttggaggttcaggggatgtacattcagtatacataaagggttcaagaactcaatggcaaccaatgtcaagaaattggggccaaaattggcagaataacgcttaccttaacggccaaagcttgtcctttaaggtcactacaggcgatggtcgcactgttgtttcatacaatgcagctcctagttcttggtcatttggtcagacattttctggaggacaattccgttaaaacgcaacatattctttaagaaaaaaaaatcagaattttcaaagtatactacttgctaatatattattctaagagttttgccttanatttgagggttttactcaccaaaatatttggggaaaagcgcagtttggcactttttgtccattgtaaaattggtcattcaattgtggaagtaaaaagaattgatttggcctaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="-" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="75694" stop="74651"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="75394" g_stop="74951" g_length="444"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="444" r_length="444" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="445" polyA_stop="460"/>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="-" ref_id="SGN-E354889" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>444</cumulative_length_of_scored_exons>
        <coverage percentage="0.965" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E354889" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="75394" e_stop="74951"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGGTTCTTGTAACAAATGTTGGAGGTTCAGGGGATGTACATTCAGTATACATAAAGGGTTCAAGAACTCAATGGCAACCAATGTCAAGAAATTGGGGCCAAAATTGGCAGAATAACGCTTACCTTAACGGCCAAAGCTTGTCCTTTAAGGTCACTACAGGCGATGGTCGCACTGTTGTTTCATACAATGCAGCTCCTAGTTCTTGGTCATTTGGTCAGACATTTTCTGGAGGACAATTCCGTTAAAACGCAACATATTCTTTAAGAAAAAAAAATCAGAATTTTCAAAGTATACTACTTGCTAATATATTATTCTAAGAGTTTTGCCTTAAATTTGAGGGTTTTACTCACCAAAATATTTGGGGAAAAGCGCAGTTTGGCACTTTTTGTCCATTGTAAAATTGGTCATTCAATTGTGGAAGTAAAAAGAATTGATTTGGCCTA</genome_strand>
        <mrna_strand>TTGGTTCTTGTAACAAATGTTGGAGGTTCAGGGGATGTACATTCAGTATACATAAAGGGTTCAAGAACTCAATGGCAACCAATGTCAAGAAATTGGGGCCAAAATTGGCAGAATAACGCTTACCTTAACGGCCAAAGCTTGTCCTTTAAGGTCACTACAGGCGATGGTCGCACTGTTGTTTCATACAATGCAGCTCCTAGTTCTTGGTCATTTGGTCAGACATTTTCTGGAGGACAATTCCGTTAAAACGCAACATATTCTTTAAGAAAAAAAAATCAGAATTTTCAAAGTATACTACTTGCTAATATATTATTCTAAGAGTTTTGCCTTANATTTGAGGGTTTTACTCACCAAAATATTTGGGGAAAAGCGCAGTTTGGCACTTTTTGTCCATTGTAAAATTGGTCATTCAATTGTGGAAGTAAAAAGAATTGATTTGGCCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E355097" ref_strand="+" ref_description="SGN-E355097 [cTOS-18-F5]">
      <seq>ttacggtaacagccaccaatttctgtccaccaggaggatggtgtgatcctccacgccctcattttgatctctctcaacctatcttcttgcgcattgctcaatatagagctggcatagttcctgttgcctatagaagggtaccctgcagaagaagcggaggaattagatttacaatcaatggccactcttacttcaacttggttcttgtaacaaatgttggaggttcaggggatgtacattcagtatacataaagggttcaagaactcaatggcaaccaatgtcaagaaattggggccaaaattggcagaataacgcttaccttaacggccaaagcttgtcctttaaggtcactacaggcgatggtcgcactgttgtttcatacaatgcagctcctagttcttggtcatttggtcagacattttctggaggacaattccgttaaaacgcaacatattctttaagaaaaaaaaatcagaattttcaaagtatactacttgctaatatattattctaagagttttgccttaaatttgagggtatttactcaccaaaatatttggggaaaagcgcagtttggcactttttgtccattgtaaaattggtcattcaattgtggaagtaaaaagaattgatttggcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="-" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="76009" stop="74653"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="75709" g_stop="75574" g_length="136"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="136" r_length="136" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="75573" i_stop="75456" i_length="118">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="75455" g_stop="74953" g_length="503"/>
          <reference_exon_boundary r_type="cDNA" r_start="137" r_stop="640" r_length="504" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="-" ref_id="SGN-E355097" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>639</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E355097" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="75709" e_stop="75574"/>
          <exon e_start="75455" e_stop="74953"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTACGGTAACAGCCACCAATTTCTGTCCACCAGGAGGATGGTGTGATCCTCCACGCCCTCATTTTGATCTCTCTCAACCTATCTTCTTGCGCATTGCTCAATATAGAGCTGGCATAGTTCCTGTTGCCTATAGAAGGTAATTTATATTTACCCTTCTCTTTATATCGAAATTGAAACTGAGAAAGAGTATGTTCTCATAGACCGAAAAGTTTATTTGTTTATGGTAACTAAATTATTGTGTTAATGTTTTACAGGGTACCCTGCAGAAGAAGCGGAGGAATTAGATTTACAATCAATGGCCACTCTTACTTCAACTTGGTTCTTGTAACAAATGTTGGAGGTTCAGGGGATGTACATTCAGTATACATAAAGGGTTCAAGAACTCAATGGCAACCAATGTCAAGAAATTGGGGCCAAAATTGGCAGAATAACGCTTACCTTAACGGCCAAAGCTTGTCCTTTAAGGTCACTACAGGCGATGGTCGCACTGTTGTTTCATACAATGCAGCTCCTAGTTCTTGGTCATTTGGTCAGACATTTTCTGGAGGACAATTCCGTTAAAACGCAACATATTCTTTAAGAAAAAAAAATCAGAATTTTCAAAGTATACTACTTGCTAATATATTATTCTAAGAGTTTTGCCTTAAATTTGAGGGT-TTTACTCACCAAAATATTTGGGGAAAAGCGCAGTTTGGCACTTTTTGTCCATTGTAAAATTGGTCATTCAATTGTGGAAGTAAAAAGAATTGATTTGGCC</genome_strand>
        <mrna_strand>TTACGGTAACAGCCACCAATTTCTGTCCACCAGGAGGATGGTGTGATCCTCCACGCCCTCATTTTGATCTCTCTCAACCTATCTTCTTGCGCATTGCTCAATATAGAGCTGGCATAGTTCCTGTTGCCTATAGAAG......................................................................................................................GGTACCCTGCAGAAGAAGCGGAGGAATTAGATTTACAATCAATGGCCACTCTTACTTCAACTTGGTTCTTGTAACAAATGTTGGAGGTTCAGGGGATGTACATTCAGTATACATAAAGGGTTCAAGAACTCAATGGCAACCAATGTCAAGAAATTGGGGCCAAAATTGGCAGAATAACGCTTACCTTAACGGCCAAAGCTTGTCCTTTAAGGTCACTACAGGCGATGGTCGCACTGTTGTTTCATACAATGCAGCTCCTAGTTCTTGGTCATTTGGTCAGACATTTTCTGGAGGACAATTCCGTTAAAACGCAACATATTCTTTAAGAAAAAAAAATCAGAATTTTCAAAGTATACTACTTGCTAATATATTATTCTAAGAGTTTTGCCTTAAATTTGAGGGTATTTACTCACCAAAATATTTGGGGAAAAGCGCAGTTTGGCACTTTTTGTCCATTGTAAAATTGGTCATTCAATTGTGGAAGTAAAAAGAATTGATTTGGCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E354489" ref_strand="+" ref_description="SGN-E354489 [cTOS-17-L24]">
      <seq>ttacggtaacagccaccaatttctgtccaccaggaggatggtgtgatcctccacgccctcattttgatctctctcaacctatcttcttgcgcattgctcaatatagagctggcatagttcctgttgcctatagaagggtaccctgcagaagaagcggaggaattagatttacaatcaatggccactcttacttcaacttggttcttgtaacaaatgttggaggttcaggggatgtacattcagtatacataaagggttcaagaactcaatggcaaccaatgtcaagaaattggggccaaaattggcagaataacgcttaccttaacggccaaagcttgtcctttaaggtcactacaggcgatggtcgcactgttgtttcatacaatgcagctcctagttcttggtcatttggtcagacattttctggaggacaattccgttaaaacgcaacatattctttaagaaaaaaaaatcagaattttcaaagtatactacttgctaatatattattctaagagttttgccttaaatttgagggtatttactcaccaaaatatttggggaaaagcgcagtttggcactttttgtccattgtaaaattggtcattcaattgtggaagtaaaaagaattgatttggc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="-" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="76009" stop="74654"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="75709" g_stop="75574" g_length="136"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="136" r_length="136" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="75573" i_stop="75456" i_length="118">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="75455" g_stop="74954" g_length="502"/>
          <reference_exon_boundary r_type="cDNA" r_start="137" r_stop="639" r_length="503" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="-" ref_id="SGN-E354489" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>638</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E354489" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="75709" e_stop="75574"/>
          <exon e_start="75455" e_stop="74954"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTACGGTAACAGCCACCAATTTCTGTCCACCAGGAGGATGGTGTGATCCTCCACGCCCTCATTTTGATCTCTCTCAACCTATCTTCTTGCGCATTGCTCAATATAGAGCTGGCATAGTTCCTGTTGCCTATAGAAGGTAATTTATATTTACCCTTCTCTTTATATCGAAATTGAAACTGAGAAAGAGTATGTTCTCATAGACCGAAAAGTTTATTTGTTTATGGTAACTAAATTATTGTGTTAATGTTTTACAGGGTACCCTGCAGAAGAAGCGGAGGAATTAGATTTACAATCAATGGCCACTCTTACTTCAACTTGGTTCTTGTAACAAATGTTGGAGGTTCAGGGGATGTACATTCAGTATACATAAAGGGTTCAAGAACTCAATGGCAACCAATGTCAAGAAATTGGGGCCAAAATTGGCAGAATAACGCTTACCTTAACGGCCAAAGCTTGTCCTTTAAGGTCACTACAGGCGATGGTCGCACTGTTGTTTCATACAATGCAGCTCCTAGTTCTTGGTCATTTGGTCAGACATTTTCTGGAGGACAATTCCGTTAAAACGCAACATATTCTTTAAGAAAAAAAAATCAGAATTTTCAAAGTATACTACTTGCTAATATATTATTCTAAGAGTTTTGCCTTAAATTTGAGGGT-TTTACTCACCAAAATATTTGGGGAAAAGCGCAGTTTGGCACTTTTTGTCCATTGTAAAATTGGTCATTCAATTGTGGAAGTAAAAAGAATTGATTTGGC</genome_strand>
        <mrna_strand>TTACGGTAACAGCCACCAATTTCTGTCCACCAGGAGGATGGTGTGATCCTCCACGCCCTCATTTTGATCTCTCTCAACCTATCTTCTTGCGCATTGCTCAATATAGAGCTGGCATAGTTCCTGTTGCCTATAGAAG......................................................................................................................GGTACCCTGCAGAAGAAGCGGAGGAATTAGATTTACAATCAATGGCCACTCTTACTTCAACTTGGTTCTTGTAACAAATGTTGGAGGTTCAGGGGATGTACATTCAGTATACATAAAGGGTTCAAGAACTCAATGGCAACCAATGTCAAGAAATTGGGGCCAAAATTGGCAGAATAACGCTTACCTTAACGGCCAAAGCTTGTCCTTTAAGGTCACTACAGGCGATGGTCGCACTGTTGTTTCATACAATGCAGCTCCTAGTTCTTGGTCATTTGGTCAGACATTTTCTGGAGGACAATTCCGTTAAAACGCAACATATTCTTTAAGAAAAAAAAATCAGAATTTTCAAAGTATACTACTTGCTAATATATTATTCTAAGAGTTTTGCCTTAAATTTGAGGGTATTTACTCACCAAAATATTTGGGGAAAAGCGCAGTTTGGCACTTTTTGTCCATTGTAAAATTGGTCATTCAATTGTGGAAGTAAAAAGAATTGATTTGGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E701084" ref_strand="+" ref_description="SGN-E701084 [FA14DH12]">
      <seq>gaaactttatttttttgttcaaaaatggctcttttagctatccttttaatgggaatttccctcatgtttcaatcagcccatggctatggtggttggatcaatgcacatgccactttttacggtggaggagatgcttctggaactatgggtggtgcttgtggttacggaaatttatacagcacgggatacggaacgaacactgctgcgttgagtactgctctgttcaacaacgggttgagctgtggagcgtgttttcagctaatgtgtgtgaatgcggggcagtactgcctgccaggcataattacggtaacagccaccaatttctgtccaccaggaggatggtgtgatcctccacgccctcattttgatctctctcaacctatcttcttgcgcattgctcaatatagagctggcatagttcctgttgcctatagaagggtaccctgcagaagaagcggaggaattagatttacaatcaatggccactcttacttcaacttggttcttgtaacaaatgttggaggttcaggggatgtacattcagtatacataaagggttcaagaactcaatggcaaccaatgtcaagaaattggggccaaaattggcagaataacgcttaccttaacggccaaagcttgtcctttaaggtcactacaggcgatggtcgcactgttgtttcatacaatgcagctcctagttcttggtcatttggtcagacattttctggaggacaattccgttaaaacgcaacatattctttaagaaaaaaaaatcagaattttcaaagtatactacttgctaatatattattctaagagttttgcctaaaatttgagggttttactcaccaaaatattgggggaaaagcgcagtttgccacttttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="-" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="76371" stop="74707"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76175" g_stop="76160" g_length="16"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="16" r_length="16" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76159" i_stop="76072" i_length="88">
            <donor d_prob="0.404" d_score="0.00"/>
            <acceptor a_prob="0.916" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="76071" g_stop="75940" g_length="132"/>
          <reference_exon_boundary r_type="cDNA" r_start="17" r_stop="148" r_length="132" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="75939" i_stop="75863" i_length="77">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="75862" g_stop="75574" g_length="289"/>
          <reference_exon_boundary r_type="cDNA" r_start="149" r_stop="437" r_length="289" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="75573" i_stop="75456" i_length="118">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="75455" g_stop="75007" g_length="449"/>
          <reference_exon_boundary r_type="cDNA" r_start="438" r_stop="886" r_length="449" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="-" ref_id="SGN-E701084" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>886</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E701084" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76175" e_stop="76160"/>
          <exon e_start="76071" e_stop="75940"/>
          <exon e_start="75862" e_stop="75574"/>
          <exon e_start="75455" e_stop="75007"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAACTTTATTTTTTTGTGAGTCATTTTCCCTAGTTGTTCAATTTATTTTTTTTTATAGTAAACTGACTTCATTAGCACTAAACTTTAATTCCATCCCCTGCAGGTTCAAAAATGGCTCTTTTAGCTATCCTTTTAATGGGAATTTCCCTCATGTTTCAATCAGCCCATGGCTATGGTGGTTGGATCAATGCACATGCCACTTTTTACGGTGGAGGAGATGCTTCTGGAACTATGGGTACTACAATTTTTCACTTGAGCCTAAGCTTGTAGTCATGTAAAAAAACTACTGAAATCGTGTGTGGATTTTGACAGGTGGTGCTTGTGGTTACGGAAATTTATACAGCACGGGATACGGAACGAACACTGCTGCGTTGAGTACTGCTCTGTTCAACAACGGGTTGAGCTGTGGAGCGTGTTTTCAGCTAATGTGTGTGAATGCGGGGCAGTACTGCCTGCCAGGCATAATTACGGTAACAGCCACCAATTTCTGTCCACCAGGAGGATGGTGTGATCCTCCACGCCCTCATTTTGATCTCTCTCAACCTATCTTCTTGCGCATTGCTCAATATAGAGCTGGCATAGTTCCTGTTGCCTATAGAAGGTAATTTATATTTACCCTTCTCTTTATATCGAAATTGAAACTGAGAAAGAGTATGTTCTCATAGACCGAAAAGTTTATTTGTTTATGGTAACTAAATTATTGTGTTAATGTTTTACAGGGTACCCTGCAGAAGAAGCGGAGGAATTAGATTTACAATCAATGGCCACTCTTACTTCAACTTGGTTCTTGTAACAAATGTTGGAGGTTCAGGGGATGTACATTCAGTATACATAAAGGGTTCAAGAACTCAATGGCAACCAATGTCAAGAAATTGGGGCCAAAATTGGCAGAATAACGCTTACCTTAACGGCCAAAGCTTGTCCTTTAAGGTCACTACAGGCGATGGTCGCACTGTTGTTTCATACAATGCAGCTCCTAGTTCTTGGTCATTTGGTCAGACATTTTCTGGAGGACAATTCCGTTAAAACGCAACATATTCTTTAAGAAAAAAAAATCAGAATTTTCAAAGTATACTACTTGCTAATATATTATTCTAAGAGTTTTGCCTTAAATTTGAGGGTTTTACTCACCAAAATATTTGGGGAAAAGCGCAGTTTGGCACTTTTT</genome_strand>
        <mrna_strand>GAAACTTTATTTTTTT........................................................................................GTTCAAAAATGGCTCTTTTAGCTATCCTTTTAATGGGAATTTCCCTCATGTTTCAATCAGCCCATGGCTATGGTGGTTGGATCAATGCACATGCCACTTTTTACGGTGGAGGAGATGCTTCTGGAACTATGG.............................................................................GTGGTGCTTGTGGTTACGGAAATTTATACAGCACGGGATACGGAACGAACACTGCTGCGTTGAGTACTGCTCTGTTCAACAACGGGTTGAGCTGTGGAGCGTGTTTTCAGCTAATGTGTGTGAATGCGGGGCAGTACTGCCTGCCAGGCATAATTACGGTAACAGCCACCAATTTCTGTCCACCAGGAGGATGGTGTGATCCTCCACGCCCTCATTTTGATCTCTCTCAACCTATCTTCTTGCGCATTGCTCAATATAGAGCTGGCATAGTTCCTGTTGCCTATAGAAG......................................................................................................................GGTACCCTGCAGAAGAAGCGGAGGAATTAGATTTACAATCAATGGCCACTCTTACTTCAACTTGGTTCTTGTAACAAATGTTGGAGGTTCAGGGGATGTACATTCAGTATACATAAAGGGTTCAAGAACTCAATGGCAACCAATGTCAAGAAATTGGGGCCAAAATTGGCAGAATAACGCTTACCTTAACGGCCAAAGCTTGTCCTTTAAGGTCACTACAGGCGATGGTCGCACTGTTGTTTCATACAATGCAGCTCCTAGTTCTTGGTCATTTGGTCAGACATTTTCTGGAGGACAATTCCGTTAAAACGCAACATATTCTTTAAGAAAAAAAAATCAGAATTTTCAAAGTATACTACTTGCTAATATATTATTCTAAGAGTTTTGCCTAAAATTTGAGGGTTTTACTCACCAAAATATTGGGGGAAAAGCGCAGTTTGCCACTTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E738456" ref_strand="+" ref_description="SGN-E738456 [LC13CH04]">
      <seq>aatacatagaaactttattttttttgttcaaaaatggctcttttagctatccttttaatgggaatttccctcatgtttcaatcagcccatggctatggtggttggatcaatgcacatgccactttttacggtggaggagatgcttctggaactatgggtggtgcttgtggttacggaaatttatacagcacgggatacggaacgaacactgctgcgttgagtactgctctgttcaacaacgggttgagctgtggagcgtgttttcagctaatgtgtgtgaatgcggggcagtactgcctgccaggcataattacggtaacagccaccaatttctgtccaccaggaggatggtgtgatcctccacgccctcattttgatctctctcaacctatcttcttgcgcattgctcaatatagagctggcatagttcctgttgcctatagaagggtaccctgcagaagaagcggaggaattagatttacaatcaatggccactcttacttcaacttggttcttgtaacaaatgttggaggttcaggggatgtacattcagtatacataaagggttcaagaactcaatggcaaccaatgtcaagaaattggggccaaaattggcagaataacgcttaccttaacggccaaagcttgtcctttaaggtcactacaggcgatggtcgcactgttgtttcatacaatgcagctcctagttcttggtcatttggtcagacattttctggaggacaattccgttaaaacgcaacatattctttaagaaaaaaaaaatcagaattttcaaagtatactacttgctaatatattattctaagagttttgccttaaatttgagggttttactcaccaaaatatttggggaaaagcgcagtttggcactttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="-" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="76483" stop="74708"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76183" g_stop="76160" g_length="24"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="25" r_length="25" r_score="0.875"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76159" i_stop="76072" i_length="88">
            <donor d_prob="0.404" d_score="0.00"/>
            <acceptor a_prob="0.916" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="76071" g_stop="75940" g_length="132"/>
          <reference_exon_boundary r_type="cDNA" r_start="26" r_stop="157" r_length="132" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="75939" i_stop="75863" i_length="77">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="75862" g_stop="75574" g_length="289"/>
          <reference_exon_boundary r_type="cDNA" r_start="158" r_stop="446" r_length="289" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="75573" i_stop="75456" i_length="118">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="75455" g_stop="75008" g_length="448"/>
          <reference_exon_boundary r_type="cDNA" r_start="447" r_stop="895" r_length="449" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="-" ref_id="SGN-E738456" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>893</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E738456" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76183" e_stop="76160"/>
          <exon e_start="76071" e_stop="75940"/>
          <exon e_start="75862" e_stop="75574"/>
          <exon e_start="75455" e_stop="75008"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACACATAGAAACTTTA-TTTTTTTGTGAGTCATTTTCCCTAGTTGTTCAATTTATTTTTTTTTATAGTAAACTGACTTCATTAGCACTAAACTTTAATTCCATCCCCTGCAGGTTCAAAAATGGCTCTTTTAGCTATCCTTTTAATGGGAATTTCCCTCATGTTTCAATCAGCCCATGGCTATGGTGGTTGGATCAATGCACATGCCACTTTTTACGGTGGAGGAGATGCTTCTGGAACTATGGGTACTACAATTTTTCACTTGAGCCTAAGCTTGTAGTCATGTAAAAAAACTACTGAAATCGTGTGTGGATTTTGACAGGTGGTGCTTGTGGTTACGGAAATTTATACAGCACGGGATACGGAACGAACACTGCTGCGTTGAGTACTGCTCTGTTCAACAACGGGTTGAGCTGTGGAGCGTGTTTTCAGCTAATGTGTGTGAATGCGGGGCAGTACTGCCTGCCAGGCATAATTACGGTAACAGCCACCAATTTCTGTCCACCAGGAGGATGGTGTGATCCTCCACGCCCTCATTTTGATCTCTCTCAACCTATCTTCTTGCGCATTGCTCAATATAGAGCTGGCATAGTTCCTGTTGCCTATAGAAGGTAATTTATATTTACCCTTCTCTTTATATCGAAATTGAAACTGAGAAAGAGTATGTTCTCATAGACCGAAAAGTTTATTTGTTTATGGTAACTAAATTATTGTGTTAATGTTTTACAGGGTACCCTGCAGAAGAAGCGGAGGAATTAGATTTACAATCAATGGCCACTCTTACTTCAACTTGGTTCTTGTAACAAATGTTGGAGGTTCAGGGGATGTACATTCAGTATACATAAAGGGTTCAAGAACTCAATGGCAACCAATGTCAAGAAATTGGGGCCAAAATTGGCAGAATAACGCTTACCTTAACGGCCAAAGCTTGTCCTTTAAGGTCACTACAGGCGATGGTCGCACTGTTGTTTCATACAATGCAGCTCCTAGTTCTTGGTCATTTGGTCAGACATTTTCTGGAGGACAATTCCGTTAAAACGCAACATATTCTTTAAG-AAAAAAAAATCAGAATTTTCAAAGTATACTACTTGCTAATATATTATTCTAAGAGTTTTGCCTTAAATTTGAGGGTTTTACTCACCAAAATATTTGGGGAAAAGCGCAGTTTGGCACTTTT</genome_strand>
        <mrna_strand>AATACATAGAAACTTTATTTTTTTT........................................................................................GTTCAAAAATGGCTCTTTTAGCTATCCTTTTAATGGGAATTTCCCTCATGTTTCAATCAGCCCATGGCTATGGTGGTTGGATCAATGCACATGCCACTTTTTACGGTGGAGGAGATGCTTCTGGAACTATGG.............................................................................GTGGTGCTTGTGGTTACGGAAATTTATACAGCACGGGATACGGAACGAACACTGCTGCGTTGAGTACTGCTCTGTTCAACAACGGGTTGAGCTGTGGAGCGTGTTTTCAGCTAATGTGTGTGAATGCGGGGCAGTACTGCCTGCCAGGCATAATTACGGTAACAGCCACCAATTTCTGTCCACCAGGAGGATGGTGTGATCCTCCACGCCCTCATTTTGATCTCTCTCAACCTATCTTCTTGCGCATTGCTCAATATAGAGCTGGCATAGTTCCTGTTGCCTATAGAAG......................................................................................................................GGTACCCTGCAGAAGAAGCGGAGGAATTAGATTTACAATCAATGGCCACTCTTACTTCAACTTGGTTCTTGTAACAAATGTTGGAGGTTCAGGGGATGTACATTCAGTATACATAAAGGGTTCAAGAACTCAATGGCAACCAATGTCAAGAAATTGGGGCCAAAATTGGCAGAATAACGCTTACCTTAACGGCCAAAGCTTGTCCTTTAAGGTCACTACAGGCGATGGTCGCACTGTTGTTTCATACAATGCAGCTCCTAGTTCTTGGTCATTTGGTCAGACATTTTCTGGAGGACAATTCCGTTAAAACGCAACATATTCTTTAAGAAAAAAAAAATCAGAATTTTCAAAGTATACTACTTGCTAATATATTATTCTAAGAGTTTTGCCTTAAATTTGAGGGTTTTACTCACCAAAATATTTGGGGAAAAGCGCAGTTTGGCACTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E708293" ref_strand="+" ref_description="SGN-E708293 [FA35BE05]">
      <seq>catatcttcatttcctaactataccctcgttcctcaagcaaacacatagaaactttatttttttgttcaaaaatggctcttttagctatccttttaatgggaatttccctcatgtttcaatcagcccatggctatggtggttggatcaatgcacatgccactttttacggtggaggagatgcttctggaactatgggtggtgcttgtggttacggaaatttatacagcacgggatacggaacgaacactgctgcgttgagtactgctctgttcaacaacgggttgagctgtggagcgtgttttcagctaatgtgtgtgaatgcggggcagtactgcctgccaggcataattacggtaacagccaccaatttctgtccaccaggaggatggtgtgatcctccacgccctcattttgatctctctcaacctatcttcttgcgcattgctcaatatagagctggcatagttcctgttgcctatagaagggtaccctgcagaagaagcggaggaattagatttacaatcaatggccactcttacttcaacttggttcttgtaacaaatgttggaggttcaggggatgtacattcagtatacataaagggttcaagaactcaatggcaaccaatgtcaagaaattggggccaaaattggcagaataacgcttaccttaacggccaaagcttgtcctttaaggtcactacaggcgatggtcgcactgttgtttcatacaatgcagctcctagttcttggtcatttggtcagacattttctggaggacaattccgttaaaacgcaacatattctttaagaaaaaaaaatcagaattttcaaagtatactacttgctaatatattattctaagaagtttgccttnaaatttgagggttttactcaccaaaatatttggggaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="-" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="76522" stop="74727"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76223" g_stop="76160" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="64" r_length="64" r_score="0.984"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76159" i_stop="76072" i_length="88">
            <donor d_prob="0.404" d_score="1.00"/>
            <acceptor a_prob="0.916" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="76071" g_stop="75940" g_length="132"/>
          <reference_exon_boundary r_type="cDNA" r_start="65" r_stop="196" r_length="132" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="75939" i_stop="75863" i_length="77">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="75862" g_stop="75574" g_length="289"/>
          <reference_exon_boundary r_type="cDNA" r_start="197" r_stop="485" r_length="289" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="75573" i_stop="75456" i_length="118">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="75455" g_stop="75027" g_length="429"/>
          <reference_exon_boundary r_type="cDNA" r_start="486" r_stop="915" r_length="430" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="-" ref_id="SGN-E708293" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>914</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E708293" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76223" e_stop="76160"/>
          <exon e_start="76071" e_stop="75940"/>
          <exon e_start="75862" e_stop="75574"/>
          <exon e_start="75455" e_stop="75027"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATATCTTCATTTCCTAACTATACCCTCGTTCCTCAAGCAAACACATAGAAACTTTATTTTTTTGTGAGTCATTTTCCCTAGTTGTTCAATTTATTTTTTTTTATAGTAAACTGACTTCATTAGCACTAAACTTTAATTCCATCCCCTGCAGGTTCAAAAATGGCTCTTTTAGCTATCCTTTTAATGGGAATTTCCCTCATGTTTCAATCAGCCCATGGCTATGGTGGTTGGATCAATGCACATGCCACTTTTTACGGTGGAGGAGATGCTTCTGGAACTATGGGTACTACAATTTTTCACTTGAGCCTAAGCTTGTAGTCATGTAAAAAAACTACTGAAATCGTGTGTGGATTTTGACAGGTGGTGCTTGTGGTTACGGAAATTTATACAGCACGGGATACGGAACGAACACTGCTGCGTTGAGTACTGCTCTGTTCAACAACGGGTTGAGCTGTGGAGCGTGTTTTCAGCTAATGTGTGTGAATGCGGGGCAGTACTGCCTGCCAGGCATAATTACGGTAACAGCCACCAATTTCTGTCCACCAGGAGGATGGTGTGATCCTCCACGCCCTCATTTTGATCTCTCTCAACCTATCTTCTTGCGCATTGCTCAATATAGAGCTGGCATAGTTCCTGTTGCCTATAGAAGGTAATTTATATTTACCCTTCTCTTTATATCGAAATTGAAACTGAGAAAGAGTATGTTCTCATAGACCGAAAAGTTTATTTGTTTATGGTAACTAAATTATTGTGTTAATGTTTTACAGGGTACCCTGCAGAAGAAGCGGAGGAATTAGATTTACAATCAATGGCCACTCTTACTTCAACTTGGTTCTTGTAACAAATGTTGGAGGTTCAGGGGATGTACATTCAGTATACATAAAGGGTTCAAGAACTCAATGGCAACCAATGTCAAGAAATTGGGGCCAAAATTGGCAGAATAACGCTTACCTTAACGGCCAAAGCTTGTCCTTTAAGGTCACTACAGGCGATGGTCGCACTGTTGTTTCATACAATGCAGCTCCTAGTTCTTGGTCATTTGGTCAGACATTTTCTGGAGGACAATTCCGTTAAAACGCAACATATTCTTTAAGAAAAAAAAATCAGAATTTTCAAAGTATACTACTTGCTAATATATTATTCTAAGAGTTTTGCCTT-AAATTTGAGGGTTTTACTCACCAAAATATTTGGGGAAA</genome_strand>
        <mrna_strand>CATATCTTCATTTCCTAACTATACCCTCGTTCCTCAAGCAAACACATAGAAACTTTATTTTTTT........................................................................................GTTCAAAAATGGCTCTTTTAGCTATCCTTTTAATGGGAATTTCCCTCATGTTTCAATCAGCCCATGGCTATGGTGGTTGGATCAATGCACATGCCACTTTTTACGGTGGAGGAGATGCTTCTGGAACTATGG.............................................................................GTGGTGCTTGTGGTTACGGAAATTTATACAGCACGGGATACGGAACGAACACTGCTGCGTTGAGTACTGCTCTGTTCAACAACGGGTTGAGCTGTGGAGCGTGTTTTCAGCTAATGTGTGTGAATGCGGGGCAGTACTGCCTGCCAGGCATAATTACGGTAACAGCCACCAATTTCTGTCCACCAGGAGGATGGTGTGATCCTCCACGCCCTCATTTTGATCTCTCTCAACCTATCTTCTTGCGCATTGCTCAATATAGAGCTGGCATAGTTCCTGTTGCCTATAGAAG......................................................................................................................GGTACCCTGCAGAAGAAGCGGAGGAATTAGATTTACAATCAATGGCCACTCTTACTTCAACTTGGTTCTTGTAACAAATGTTGGAGGTTCAGGGGATGTACATTCAGTATACATAAAGGGTTCAAGAACTCAATGGCAACCAATGTCAAGAAATTGGGGCCAAAATTGGCAGAATAACGCTTACCTTAACGGCCAAAGCTTGTCCTTTAAGGTCACTACAGGCGATGGTCGCACTGTTGTTTCATACAATGCAGCTCCTAGTTCTTGGTCATTTGGTCAGACATTTTCTGGAGGACAATTCCGTTAAAACGCAACATATTCTTTAAGAAAAAAAAATCAGAATTTTCAAAGTATACTACTTGCTAATATATTATTCTAAGAAGTTTGCCTTNAAATTTGAGGGTTTTACTCACCAAAATATTTGGGGAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E704988" ref_strand="+" ref_description="SGN-E704988 [FA25DD07]">
      <seq>ctcttttagctatccttttaatgggaatttccctcatgtttcaatcagcccatggctatggtggttggatcaatgcacatgccactttttacggtggaggagatgcttctggaactatgggtggtgcttgtggttacggaaatttatacagcacgggatacggaacgaacactgctgcgttgagtactgctctgttcaacaacgggttgagctgtggagcgtgttttcagctaatgtgtgtgaatgcggggcagtactgcctgccaggcataattacggtaacagccaccaatttctgtccaccaggaggatggtgtgatcctccacgccctcattttgatctctctcaacctatcttcttgcgcattgctcaatatagagctggcatagttcctgttgcctatagaagggtaccctgcagaagaagcggaggaattagatttacaatcaatggccactcttacttcaacttggttcttgtaacaaatgttggaggttcaggggatgtacattcagtatacataaagggttcaagaactcaatggcaaccaatgtcaagaaattggggccaaaattggcagaataacgcttaccttaacggccaaagcttgtcctttaaggtcactacaggcgatggtcgcactgttgtttcatacaatgcagctcctagttcttggtcatttggtcagacattttctggnaggacattccgttaaaacgcaacatattctttaagaaaaaaaaatcagaattttcaaagtatactacttgctaatatattattctaagagttttgccttaaatttgagggttttactcaccaaaatatttggggaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="-" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="76359" stop="74727"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76059" g_stop="75940" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="120" r_length="120" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="75939" i_stop="75863" i_length="77">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="75862" g_stop="75574" g_length="289"/>
          <reference_exon_boundary r_type="cDNA" r_start="121" r_stop="409" r_length="289" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="75573" i_stop="75456" i_length="118">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="75455" g_stop="75027" g_length="429"/>
          <reference_exon_boundary r_type="cDNA" r_start="410" r_stop="838" r_length="429" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="-" ref_id="SGN-E704988" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>838</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E704988" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76059" e_stop="75940"/>
          <exon e_start="75862" e_stop="75574"/>
          <exon e_start="75455" e_stop="75027"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCTTTTAGCTATCCTTTTAATGGGAATTTCCCTCATGTTTCAATCAGCCCATGGCTATGGTGGTTGGATCAATGCACATGCCACTTTTTACGGTGGAGGAGATGCTTCTGGAACTATGGGTACTACAATTTTTCACTTGAGCCTAAGCTTGTAGTCATGTAAAAAAACTACTGAAATCGTGTGTGGATTTTGACAGGTGGTGCTTGTGGTTACGGAAATTTATACAGCACGGGATACGGAACGAACACTGCTGCGTTGAGTACTGCTCTGTTCAACAACGGGTTGAGCTGTGGAGCGTGTTTTCAGCTAATGTGTGTGAATGCGGGGCAGTACTGCCTGCCAGGCATAATTACGGTAACAGCCACCAATTTCTGTCCACCAGGAGGATGGTGTGATCCTCCACGCCCTCATTTTGATCTCTCTCAACCTATCTTCTTGCGCATTGCTCAATATAGAGCTGGCATAGTTCCTGTTGCCTATAGAAGGTAATTTATATTTACCCTTCTCTTTATATCGAAATTGAAACTGAGAAAGAGTATGTTCTCATAGACCGAAAAGTTTATTTGTTTATGGTAACTAAATTATTGTGTTAATGTTTTACAGGGTACCCTGCAGAAGAAGCGGAGGAATTAGATTTACAATCAATGGCCACTCTTACTTCAACTTGGTTCTTGTAACAAATGTTGGAGGTTCAGGGGATGTACATTCAGTATACATAAAGGGTTCAAGAACTCAATGGCAACCAATGTCAAGAAATTGGGGCCAAAATTGGCAGAATAACGCTTACCTTAACGGCCAAAGCTTGTCCTTTAAGGTCACTACAGGCGATGGTCGCACTGTTGTTTCATACAATGCAGCTCCTAGTTCTTGGTCATTTGGTCAGACATTTTCTGG-AGGACAATTCCGTTAAAACGCAACATATTCTTTAAGAAAAAAAAATCAGAATTTTCAAAGTATACTACTTGCTAATATATTATTCTAAGAGTTTTGCCTTAAATTTGAGGGTTTTACTCACCAAAATATTTGGGGAAA</genome_strand>
        <mrna_strand>CTCTTTTAGCTATCCTTTTAATGGGAATTTCCCTCATGTTTCAATCAGCCCATGGCTATGGTGGTTGGATCAATGCACATGCCACTTTTTACGGTGGAGGAGATGCTTCTGGAACTATGG.............................................................................GTGGTGCTTGTGGTTACGGAAATTTATACAGCACGGGATACGGAACGAACACTGCTGCGTTGAGTACTGCTCTGTTCAACAACGGGTTGAGCTGTGGAGCGTGTTTTCAGCTAATGTGTGTGAATGCGGGGCAGTACTGCCTGCCAGGCATAATTACGGTAACAGCCACCAATTTCTGTCCACCAGGAGGATGGTGTGATCCTCCACGCCCTCATTTTGATCTCTCTCAACCTATCTTCTTGCGCATTGCTCAATATAGAGCTGGCATAGTTCCTGTTGCCTATAGAAG......................................................................................................................GGTACCCTGCAGAAGAAGCGGAGGAATTAGATTTACAATCAATGGCCACTCTTACTTCAACTTGGTTCTTGTAACAAATGTTGGAGGTTCAGGGGATGTACATTCAGTATACATAAAGGGTTCAAGAACTCAATGGCAACCAATGTCAAGAAATTGGGGCCAAAATTGGCAGAATAACGCTTACCTTAACGGCCAAAGCTTGTCCTTTAAGGTCACTACAGGCGATGGTCGCACTGTTGTTTCATACAATGCAGCTCCTAGTTCTTGGTCATTTGGTCAGACATTTTCTGGNAGGAC-ATTCCGTTAAAACGCAACATATTCTTTAAGAAAAAAAAATCAGAATTTTCAAAGTATACTACTTGCTAATATATTATTCTAAGAGTTTTGCCTTAAATTTGAGGGTTTTACTCACCAAAATATTTGGGGAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E700772" ref_strand="+" ref_description="SGN-E700772 [FA14AE05]">
      <seq>agcaaacacatagaaactttatttttttgttcaaaaatggctcttttagctatccttttaatgggaatttccctcatgtttcaatcagcccatggctatggtggttggatcaatgcacatgccactttttacggtggaggagatgcttctggaactatgggtggtgcttgtggttacggaaatttatacagcacgggatacggaacgaacactgctgcgttgagtactgctctgttcaacaacgggttgagctgtggagcgtgttttcagctaatgtgtgtgaatgcggggcagtactgcctgccaggcataattacggtaacagccaccaatttctgtccaccaggaggatggtgtgatcctccacgccctcattttgatctctctcaacctatcttcttgcgcattgctcaatatagagctggcatagttcctgttgcctatagaagggtaccctgcagaagaagcggaggaattagatttacaatcaatggccactcttacttcaacttggttcttgtaacaaatgttggaggttcaggggatgtacattcagtatacataaagggttcaagaactcaatggcaaccaatgtcaagaaattggggccaaaattggcagaataacgcttaccttaacggccaaagcttgtcctttaaggtcactacaggcgatggtcgcactgttgtttcatacaatgcagctcctagttcttggtcatttggtcagacattttctggaggacaattccgttnaaacgcaacatattctttaagaaaaaaaaatcagaattttcaaagtatactacttgctaatatattattctaagagttttgccttaaatttgagggttttactcaccaaaatatttggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="-" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="76487" stop="74731"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76187" g_stop="76160" g_length="28"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="28" r_length="28" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76159" i_stop="76072" i_length="88">
            <donor d_prob="0.404" d_score="0.00"/>
            <acceptor a_prob="0.916" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="76071" g_stop="75940" g_length="132"/>
          <reference_exon_boundary r_type="cDNA" r_start="29" r_stop="160" r_length="132" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="75939" i_stop="75863" i_length="77">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="75862" g_stop="75574" g_length="289"/>
          <reference_exon_boundary r_type="cDNA" r_start="161" r_stop="449" r_length="289" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="75573" i_stop="75456" i_length="118">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="75455" g_stop="75031" g_length="425"/>
          <reference_exon_boundary r_type="cDNA" r_start="450" r_stop="874" r_length="425" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="-" ref_id="SGN-E700772" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>874</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E700772" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76187" e_stop="76160"/>
          <exon e_start="76071" e_stop="75940"/>
          <exon e_start="75862" e_stop="75574"/>
          <exon e_start="75455" e_stop="75031"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCAAACACATAGAAACTTTATTTTTTTGTGAGTCATTTTCCCTAGTTGTTCAATTTATTTTTTTTTATAGTAAACTGACTTCATTAGCACTAAACTTTAATTCCATCCCCTGCAGGTTCAAAAATGGCTCTTTTAGCTATCCTTTTAATGGGAATTTCCCTCATGTTTCAATCAGCCCATGGCTATGGTGGTTGGATCAATGCACATGCCACTTTTTACGGTGGAGGAGATGCTTCTGGAACTATGGGTACTACAATTTTTCACTTGAGCCTAAGCTTGTAGTCATGTAAAAAAACTACTGAAATCGTGTGTGGATTTTGACAGGTGGTGCTTGTGGTTACGGAAATTTATACAGCACGGGATACGGAACGAACACTGCTGCGTTGAGTACTGCTCTGTTCAACAACGGGTTGAGCTGTGGAGCGTGTTTTCAGCTAATGTGTGTGAATGCGGGGCAGTACTGCCTGCCAGGCATAATTACGGTAACAGCCACCAATTTCTGTCCACCAGGAGGATGGTGTGATCCTCCACGCCCTCATTTTGATCTCTCTCAACCTATCTTCTTGCGCATTGCTCAATATAGAGCTGGCATAGTTCCTGTTGCCTATAGAAGGTAATTTATATTTACCCTTCTCTTTATATCGAAATTGAAACTGAGAAAGAGTATGTTCTCATAGACCGAAAAGTTTATTTGTTTATGGTAACTAAATTATTGTGTTAATGTTTTACAGGGTACCCTGCAGAAGAAGCGGAGGAATTAGATTTACAATCAATGGCCACTCTTACTTCAACTTGGTTCTTGTAACAAATGTTGGAGGTTCAGGGGATGTACATTCAGTATACATAAAGGGTTCAAGAACTCAATGGCAACCAATGTCAAGAAATTGGGGCCAAAATTGGCAGAATAACGCTTACCTTAACGGCCAAAGCTTGTCCTTTAAGGTCACTACAGGCGATGGTCGCACTGTTGTTTCATACAATGCAGCTCCTAGTTCTTGGTCATTTGGTCAGACATTTTCTGGAGGACAATTCCGTTAAAACGCAACATATTCTTTAAGAAAAAAAAATCAGAATTTTCAAAGTATACTACTTGCTAATATATTATTCTAAGAGTTTTGCCTTAAATTTGAGGGTTTTACTCACCAAAATATTTGGG</genome_strand>
        <mrna_strand>AGCAAACACATAGAAACTTTATTTTTTT........................................................................................GTTCAAAAATGGCTCTTTTAGCTATCCTTTTAATGGGAATTTCCCTCATGTTTCAATCAGCCCATGGCTATGGTGGTTGGATCAATGCACATGCCACTTTTTACGGTGGAGGAGATGCTTCTGGAACTATGG.............................................................................GTGGTGCTTGTGGTTACGGAAATTTATACAGCACGGGATACGGAACGAACACTGCTGCGTTGAGTACTGCTCTGTTCAACAACGGGTTGAGCTGTGGAGCGTGTTTTCAGCTAATGTGTGTGAATGCGGGGCAGTACTGCCTGCCAGGCATAATTACGGTAACAGCCACCAATTTCTGTCCACCAGGAGGATGGTGTGATCCTCCACGCCCTCATTTTGATCTCTCTCAACCTATCTTCTTGCGCATTGCTCAATATAGAGCTGGCATAGTTCCTGTTGCCTATAGAAG......................................................................................................................GGTACCCTGCAGAAGAAGCGGAGGAATTAGATTTACAATCAATGGCCACTCTTACTTCAACTTGGTTCTTGTAACAAATGTTGGAGGTTCAGGGGATGTACATTCAGTATACATAAAGGGTTCAAGAACTCAATGGCAACCAATGTCAAGAAATTGGGGCCAAAATTGGCAGAATAACGCTTACCTTAACGGCCAAAGCTTGTCCTTTAAGGTCACTACAGGCGATGGTCGCACTGTTGTTTCATACAATGCAGCTCCTAGTTCTTGGTCATTTGGTCAGACATTTTCTGGAGGACAATTCCGTTNAAACGCAACATATTCTTTAAGAAAAAAAAATCAGAATTTTCAAAGTATACTACTTGCTAATATATTATTCTAAGAGTTTTGCCTTAAATTTGAGGGTTTTACTCACCAAAATATTTGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E705776" ref_strand="+" ref_description="SGN-E705776 [FA28AD11]">
      <seq>gttcctcaagcaaacacatagaaactttatttttttgttcaaaaatggctcttttagctatccttttaatgggaatttccctcatgtttcaatcagcccatggctatggtggttggatcaatgcacatgccactttttacggtggaggagatgcttctggaactatgggtggtgcttgtggttacggaaatttatacagcacgggatacggaacgaacactgctgcgttgagtactgctctgttcaacaacgggttgagctgtggagcgtgttttcagctaatgtgtgtgaatgcggggcagtactgcctgccaggcataattacggtaacagccaccaatttctgtccaccaggaggatggtgtgatcctccacgccctcattttgatctctctcaacctatcttcttgcgcattgctcaatatagagctggcatagttcctgttgcctatagaagggtaccctgcagaagaagcggaggaattagatttacaatcaatggccactcttacttcaacttggttcttgtaacaaatgttggaggttcaggggatgtacattcagtatacataaagggttcaagaactcaatggcaaccaatgtcaagaaattggggccaaaattggcagaataacgcttaccttaacggccaaagcttgtcctttaaggtcactacaggcgatggtcgcactgttgtttcatacaatgcagctcctagttcttggtcatttggtcagacattttctggaggacaattccgttaaaacgcaacatattcttttagaaaaaaaaatcagaattttcaaagtatactacttgctaatatattattct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="-" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="76495" stop="74779"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76195" g_stop="76160" g_length="36"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="36" r_length="36" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76159" i_stop="76072" i_length="88">
            <donor d_prob="0.404" d_score="0.00"/>
            <acceptor a_prob="0.916" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="76071" g_stop="75940" g_length="132"/>
          <reference_exon_boundary r_type="cDNA" r_start="37" r_stop="168" r_length="132" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="75939" i_stop="75863" i_length="77">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="75862" g_stop="75574" g_length="289"/>
          <reference_exon_boundary r_type="cDNA" r_start="169" r_stop="457" r_length="289" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="75573" i_stop="75456" i_length="118">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="75455" g_stop="75079" g_length="377"/>
          <reference_exon_boundary r_type="cDNA" r_start="458" r_stop="834" r_length="377" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="-" ref_id="SGN-E705776" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>834</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E705776" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76195" e_stop="76160"/>
          <exon e_start="76071" e_stop="75940"/>
          <exon e_start="75862" e_stop="75574"/>
          <exon e_start="75455" e_stop="75079"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTCCTCAAGCAAACACATAGAAACTTTATTTTTTTGTGAGTCATTTTCCCTAGTTGTTCAATTTATTTTTTTTTATAGTAAACTGACTTCATTAGCACTAAACTTTAATTCCATCCCCTGCAGGTTCAAAAATGGCTCTTTTAGCTATCCTTTTAATGGGAATTTCCCTCATGTTTCAATCAGCCCATGGCTATGGTGGTTGGATCAATGCACATGCCACTTTTTACGGTGGAGGAGATGCTTCTGGAACTATGGGTACTACAATTTTTCACTTGAGCCTAAGCTTGTAGTCATGTAAAAAAACTACTGAAATCGTGTGTGGATTTTGACAGGTGGTGCTTGTGGTTACGGAAATTTATACAGCACGGGATACGGAACGAACACTGCTGCGTTGAGTACTGCTCTGTTCAACAACGGGTTGAGCTGTGGAGCGTGTTTTCAGCTAATGTGTGTGAATGCGGGGCAGTACTGCCTGCCAGGCATAATTACGGTAACAGCCACCAATTTCTGTCCACCAGGAGGATGGTGTGATCCTCCACGCCCTCATTTTGATCTCTCTCAACCTATCTTCTTGCGCATTGCTCAATATAGAGCTGGCATAGTTCCTGTTGCCTATAGAAGGTAATTTATATTTACCCTTCTCTTTATATCGAAATTGAAACTGAGAAAGAGTATGTTCTCATAGACCGAAAAGTTTATTTGTTTATGGTAACTAAATTATTGTGTTAATGTTTTACAGGGTACCCTGCAGAAGAAGCGGAGGAATTAGATTTACAATCAATGGCCACTCTTACTTCAACTTGGTTCTTGTAACAAATGTTGGAGGTTCAGGGGATGTACATTCAGTATACATAAAGGGTTCAAGAACTCAATGGCAACCAATGTCAAGAAATTGGGGCCAAAATTGGCAGAATAACGCTTACCTTAACGGCCAAAGCTTGTCCTTTAAGGTCACTACAGGCGATGGTCGCACTGTTGTTTCATACAATGCAGCTCCTAGTTCTTGGTCATTTGGTCAGACATTTTCTGGAGGACAATTCCGTTAAAACGCAACATATTCTTTAAGAAAAAAAAATCAGAATTTTCAAAGTATACTACTTGCTAATATATTATTCT</genome_strand>
        <mrna_strand>GTTCCTCAAGCAAACACATAGAAACTTTATTTTTTT........................................................................................GTTCAAAAATGGCTCTTTTAGCTATCCTTTTAATGGGAATTTCCCTCATGTTTCAATCAGCCCATGGCTATGGTGGTTGGATCAATGCACATGCCACTTTTTACGGTGGAGGAGATGCTTCTGGAACTATGG.............................................................................GTGGTGCTTGTGGTTACGGAAATTTATACAGCACGGGATACGGAACGAACACTGCTGCGTTGAGTACTGCTCTGTTCAACAACGGGTTGAGCTGTGGAGCGTGTTTTCAGCTAATGTGTGTGAATGCGGGGCAGTACTGCCTGCCAGGCATAATTACGGTAACAGCCACCAATTTCTGTCCACCAGGAGGATGGTGTGATCCTCCACGCCCTCATTTTGATCTCTCTCAACCTATCTTCTTGCGCATTGCTCAATATAGAGCTGGCATAGTTCCTGTTGCCTATAGAAG......................................................................................................................GGTACCCTGCAGAAGAAGCGGAGGAATTAGATTTACAATCAATGGCCACTCTTACTTCAACTTGGTTCTTGTAACAAATGTTGGAGGTTCAGGGGATGTACATTCAGTATACATAAAGGGTTCAAGAACTCAATGGCAACCAATGTCAAGAAATTGGGGCCAAAATTGGCAGAATAACGCTTACCTTAACGGCCAAAGCTTGTCCTTTAAGGTCACTACAGGCGATGGTCGCACTGTTGTTTCATACAATGCAGCTCCTAGTTCTTGGTCATTTGGTCAGACATTTTCTGGAGGACAATTCCGTTAAAACGCAACATATTCTTTTAGAAAAAAAAATCAGAATTTTCAAAGTATACTACTTGCTAATATATTATTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E698918" ref_strand="+" ref_description="SGN-E698918 [FA08AA10]">
      <seq>cccttttacctcaagcaaacacatagaaactttatttttttgttcaaaaatggctcttttagctatccttttaatgggaatttccctcatgtttcaatcagcccatggctatggtggttggatcaatgcacatgccactttttacggtggaggagatgcttctggaactatgggtggtgcttgtggttacggaaatttatacagcacgggatacggaacgaacactgctgcgttgagtactgctctgttcaacaacgggttgagctgtggagcgtgttttcagctaatgtgtgtgaatgcggggcagtactgcctgccaggcataattacggtaacagccaccaatttctgtccaccaggaggatggtgtgatcctccacgccctcattttgatctctctcaacctatcttcttgcgcattgctcaatatagagctggcatagttcctgttgcctatagaagggtaccctgcagaagaagcggaggaattagatttacaatcaatggccactcttacttcaacttggttcttgtaacaaatgttggaggttcaggggatgtacattcagtatacataaagggttcaagaactcaatggcaaccaatgtcaagaaattggggccaaaattggcagaataacgcttaccttaacggccaaagcttgtcctttaaggtcactacaggcgatggtcgcactgttgtttcatacaatgcagctcctagttcttggtcatttggtcagacattttctggaggacaattccgttaaaacgcaacatattctttaagaaaaaaaaatcagaattttcaaagtatactacttgctaatatattattc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="-" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="76494" stop="74780"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76200" g_stop="76160" g_length="41"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="41" r_length="41" r_score="0.927"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76159" i_stop="76072" i_length="88">
            <donor d_prob="0.404" d_score="0.93"/>
            <acceptor a_prob="0.916" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="76071" g_stop="75940" g_length="132"/>
          <reference_exon_boundary r_type="cDNA" r_start="42" r_stop="173" r_length="132" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="75939" i_stop="75863" i_length="77">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="75862" g_stop="75574" g_length="289"/>
          <reference_exon_boundary r_type="cDNA" r_start="174" r_stop="462" r_length="289" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="75573" i_stop="75456" i_length="118">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="75455" g_stop="75080" g_length="376"/>
          <reference_exon_boundary r_type="cDNA" r_start="463" r_stop="838" r_length="376" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="-" ref_id="SGN-E698918" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>838</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E698918" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76200" e_stop="76160"/>
          <exon e_start="76071" e_stop="75940"/>
          <exon e_start="75862" e_stop="75574"/>
          <exon e_start="75455" e_stop="75080"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCCTCGTTCCTCAAGCAAACACATAGAAACTTTATTTTTTTGTGAGTCATTTTCCCTAGTTGTTCAATTTATTTTTTTTTATAGTAAACTGACTTCATTAGCACTAAACTTTAATTCCATCCCCTGCAGGTTCAAAAATGGCTCTTTTAGCTATCCTTTTAATGGGAATTTCCCTCATGTTTCAATCAGCCCATGGCTATGGTGGTTGGATCAATGCACATGCCACTTTTTACGGTGGAGGAGATGCTTCTGGAACTATGGGTACTACAATTTTTCACTTGAGCCTAAGCTTGTAGTCATGTAAAAAAACTACTGAAATCGTGTGTGGATTTTGACAGGTGGTGCTTGTGGTTACGGAAATTTATACAGCACGGGATACGGAACGAACACTGCTGCGTTGAGTACTGCTCTGTTCAACAACGGGTTGAGCTGTGGAGCGTGTTTTCAGCTAATGTGTGTGAATGCGGGGCAGTACTGCCTGCCAGGCATAATTACGGTAACAGCCACCAATTTCTGTCCACCAGGAGGATGGTGTGATCCTCCACGCCCTCATTTTGATCTCTCTCAACCTATCTTCTTGCGCATTGCTCAATATAGAGCTGGCATAGTTCCTGTTGCCTATAGAAGGTAATTTATATTTACCCTTCTCTTTATATCGAAATTGAAACTGAGAAAGAGTATGTTCTCATAGACCGAAAAGTTTATTTGTTTATGGTAACTAAATTATTGTGTTAATGTTTTACAGGGTACCCTGCAGAAGAAGCGGAGGAATTAGATTTACAATCAATGGCCACTCTTACTTCAACTTGGTTCTTGTAACAAATGTTGGAGGTTCAGGGGATGTACATTCAGTATACATAAAGGGTTCAAGAACTCAATGGCAACCAATGTCAAGAAATTGGGGCCAAAATTGGCAGAATAACGCTTACCTTAACGGCCAAAGCTTGTCCTTTAAGGTCACTACAGGCGATGGTCGCACTGTTGTTTCATACAATGCAGCTCCTAGTTCTTGGTCATTTGGTCAGACATTTTCTGGAGGACAATTCCGTTAAAACGCAACATATTCTTTAAGAAAAAAAAATCAGAATTTTCAAAGTATACTACTTGCTAATATATTATTC</genome_strand>
        <mrna_strand>CCCTTTTACCTCAAGCAAACACATAGAAACTTTATTTTTTT........................................................................................GTTCAAAAATGGCTCTTTTAGCTATCCTTTTAATGGGAATTTCCCTCATGTTTCAATCAGCCCATGGCTATGGTGGTTGGATCAATGCACATGCCACTTTTTACGGTGGAGGAGATGCTTCTGGAACTATGG.............................................................................GTGGTGCTTGTGGTTACGGAAATTTATACAGCACGGGATACGGAACGAACACTGCTGCGTTGAGTACTGCTCTGTTCAACAACGGGTTGAGCTGTGGAGCGTGTTTTCAGCTAATGTGTGTGAATGCGGGGCAGTACTGCCTGCCAGGCATAATTACGGTAACAGCCACCAATTTCTGTCCACCAGGAGGATGGTGTGATCCTCCACGCCCTCATTTTGATCTCTCTCAACCTATCTTCTTGCGCATTGCTCAATATAGAGCTGGCATAGTTCCTGTTGCCTATAGAAG......................................................................................................................GGTACCCTGCAGAAGAAGCGGAGGAATTAGATTTACAATCAATGGCCACTCTTACTTCAACTTGGTTCTTGTAACAAATGTTGGAGGTTCAGGGGATGTACATTCAGTATACATAAAGGGTTCAAGAACTCAATGGCAACCAATGTCAAGAAATTGGGGCCAAAATTGGCAGAATAACGCTTACCTTAACGGCCAAAGCTTGTCCTTTAAGGTCACTACAGGCGATGGTCGCACTGTTGTTTCATACAATGCAGCTCCTAGTTCTTGGTCATTTGGTCAGACATTTTCTGGAGGACAATTCCGTTAAAACGCAACATATTCTTTAAGAAAAAAAAATCAGAATTTTCAAAGTATACTACTTGCTAATATATTATTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E208328" ref_strand="+" ref_description="SGN-E208328 [cLEC-37-I11]">
      <seq>ctgccaggcataattacggtaacagccaccaatttctgtccaccaggaggatggtgtgatcctccacgccctcattttgatctctctcaacctatcttcttgcgcattgctcaatatagagctggcatagttcctgttgcctatagaagggtaccctgcagaagaagcggaggaattagatttacaatcaatggccactcttacttcaacttggttcttgtaacaaatgttggaggttcaggggatgtacattcagtatacataaagggttcaagaactcaatggcaaccaatgtcaagaaattggggccaaaattggcagaataacgcttaccttaacggccaaagcttgtcctttaaggtcactacaggcgatggtcgcactgttgtttcatacaatgcagctcctagttcttggtcatttggtcagacattttctggaggacaattccgttaaaacgcaacatattctttaagaaaaaaaaatcagaattttcaaagtatactacttgctaatata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="-" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="76022" stop="74786"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="75722" g_stop="75574" g_length="149"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="149" r_length="149" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="75573" i_stop="75456" i_length="118">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="75455" g_stop="75086" g_length="370"/>
          <reference_exon_boundary r_type="cDNA" r_start="150" r_stop="519" r_length="370" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="-" ref_id="SGN-E208328" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>519</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E208328" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="75722" e_stop="75574"/>
          <exon e_start="75455" e_stop="75086"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGCCAGGCATAATTACGGTAACAGCCACCAATTTCTGTCCACCAGGAGGATGGTGTGATCCTCCACGCCCTCATTTTGATCTCTCTCAACCTATCTTCTTGCGCATTGCTCAATATAGAGCTGGCATAGTTCCTGTTGCCTATAGAAGGTAATTTATATTTACCCTTCTCTTTATATCGAAATTGAAACTGAGAAAGAGTATGTTCTCATAGACCGAAAAGTTTATTTGTTTATGGTAACTAAATTATTGTGTTAATGTTTTACAGGGTACCCTGCAGAAGAAGCGGAGGAATTAGATTTACAATCAATGGCCACTCTTACTTCAACTTGGTTCTTGTAACAAATGTTGGAGGTTCAGGGGATGTACATTCAGTATACATAAAGGGTTCAAGAACTCAATGGCAACCAATGTCAAGAAATTGGGGCCAAAATTGGCAGAATAACGCTTACCTTAACGGCCAAAGCTTGTCCTTTAAGGTCACTACAGGCGATGGTCGCACTGTTGTTTCATACAATGCAGCTCCTAGTTCTTGGTCATTTGGTCAGACATTTTCTGGAGGACAATTCCGTTAAAACGCAACATATTCTTTAAGAAAAAAAAATCAGAATTTTCAAAGTATACTACTTGCTAATATA</genome_strand>
        <mrna_strand>CTGCCAGGCATAATTACGGTAACAGCCACCAATTTCTGTCCACCAGGAGGATGGTGTGATCCTCCACGCCCTCATTTTGATCTCTCTCAACCTATCTTCTTGCGCATTGCTCAATATAGAGCTGGCATAGTTCCTGTTGCCTATAGAAG......................................................................................................................GGTACCCTGCAGAAGAAGCGGAGGAATTAGATTTACAATCAATGGCCACTCTTACTTCAACTTGGTTCTTGTAACAAATGTTGGAGGTTCAGGGGATGTACATTCAGTATACATAAAGGGTTCAAGAACTCAATGGCAACCAATGTCAAGAAATTGGGGCCAAAATTGGCAGAATAACGCTTACCTTAACGGCCAAAGCTTGTCCTTTAAGGTCACTACAGGCGATGGTCGCACTGTTGTTTCATACAATGCAGCTCCTAGTTCTTGGTCATTTGGTCAGACATTTTCTGGAGGACAATTCCGTTAAAACGCAACATATTCTTTAAGAAAAAAAAATCAGAATTTTCAAAGTATACTACTTGCTAATATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E726890" ref_strand="+" ref_description="SGN-E726890 [LA13AE03]">
      <seq>aacacatagaaactttatttttttgttcaaaatggctcttttagctatccttttaatgggaatttccctcatgtttcaatcaacccatggctatggtggttggatcaatgcacatgccactttttacggtggaggagatgcttctggaactatgggtggtgcttgtggttacggaaatttatacagcacgggatacggaacgaacactgctgcgttgagtactgctctgttcaacaacgggttgagctgtggagcgtgttttcagctaatgtgtgtgaatgcggggcagtactgcctgccaggcataattacggtaacagccaccaatttctgtccaccaggaggatggtgtgatcctccacgccctcattttgatctctctcaacctatcttcttgcgcattgctcaatatagagctggcatagttcctgttgcctatagaagggtaccctgcagaagaagcggaggaattagatttacaatcaatggccactcttacttcaacttggttcttgtaacaaatgttggaggttcaggggatgtacattcagtatacataaagggttcaagaactcaatggcaaccaatgtcaagaaattggggccaaaattggcagaataacgcttaccttaacggccaaagcttgtcctttaaggtcactacaggcgatggtcgcactgttgtttcatacaatgcagctcctagttcttggtcatttggtcagacattttctggaggacaattccgttaaaacgcaacatattctttaagaaaaaaaatcaaaattttcaagtatactacttgctaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="-" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="76483" stop="74789"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76183" g_stop="76160" g_length="24"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="24" r_length="24" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76159" i_stop="76072" i_length="88">
            <donor d_prob="0.404" d_score="0.00"/>
            <acceptor a_prob="0.916" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="76071" g_stop="75940" g_length="132"/>
          <reference_exon_boundary r_type="cDNA" r_start="25" r_stop="155" r_length="131" r_score="0.985"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="75939" i_stop="75863" i_length="77">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="75862" g_stop="75574" g_length="289"/>
          <reference_exon_boundary r_type="cDNA" r_start="156" r_stop="444" r_length="289" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="75573" i_stop="75456" i_length="118">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="75455" g_stop="75089" g_length="367"/>
          <reference_exon_boundary r_type="cDNA" r_start="445" r_stop="809" r_length="365" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="-" ref_id="SGN-E726890" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>812</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E726890" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76183" e_stop="76160"/>
          <exon e_start="76071" e_stop="75940"/>
          <exon e_start="75862" e_stop="75574"/>
          <exon e_start="75455" e_stop="75089"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACACATAGAAACTTTATTTTTTTGTGAGTCATTTTCCCTAGTTGTTCAATTTATTTTTTTTTATAGTAAACTGACTTCATTAGCACTAAACTTTAATTCCATCCCCTGCAGGTTCAAAAATGGCTCTTTTAGCTATCCTTTTAATGGGAATTTCCCTCATGTTTCAATCAGCCCATGGCTATGGTGGTTGGATCAATGCACATGCCACTTTTTACGGTGGAGGAGATGCTTCTGGAACTATGGGTACTACAATTTTTCACTTGAGCCTAAGCTTGTAGTCATGTAAAAAAACTACTGAAATCGTGTGTGGATTTTGACAGGTGGTGCTTGTGGTTACGGAAATTTATACAGCACGGGATACGGAACGAACACTGCTGCGTTGAGTACTGCTCTGTTCAACAACGGGTTGAGCTGTGGAGCGTGTTTTCAGCTAATGTGTGTGAATGCGGGGCAGTACTGCCTGCCAGGCATAATTACGGTAACAGCCACCAATTTCTGTCCACCAGGAGGATGGTGTGATCCTCCACGCCCTCATTTTGATCTCTCTCAACCTATCTTCTTGCGCATTGCTCAATATAGAGCTGGCATAGTTCCTGTTGCCTATAGAAGGTAATTTATATTTACCCTTCTCTTTATATCGAAATTGAAACTGAGAAAGAGTATGTTCTCATAGACCGAAAAGTTTATTTGTTTATGGTAACTAAATTATTGTGTTAATGTTTTACAGGGTACCCTGCAGAAGAAGCGGAGGAATTAGATTTACAATCAATGGCCACTCTTACTTCAACTTGGTTCTTGTAACAAATGTTGGAGGTTCAGGGGATGTACATTCAGTATACATAAAGGGTTCAAGAACTCAATGGCAACCAATGTCAAGAAATTGGGGCCAAAATTGGCAGAATAACGCTTACCTTAACGGCCAAAGCTTGTCCTTTAAGGTCACTACAGGCGATGGTCGCACTGTTGTTTCATACAATGCAGCTCCTAGTTCTTGGTCATTTGGTCAGACATTTTCTGGAGGACAATTCCGTTAAAACGCAACATATTCTTTAAGAAAAAAAAATCAGAATTTTCAAAGTATACTACTTGCTAAT</genome_strand>
        <mrna_strand>AACACATAGAAACTTTATTTTTTT........................................................................................GTTC-AAAATGGCTCTTTTAGCTATCCTTTTAATGGGAATTTCCCTCATGTTTCAATCAACCCATGGCTATGGTGGTTGGATCAATGCACATGCCACTTTTTACGGTGGAGGAGATGCTTCTGGAACTATGG.............................................................................GTGGTGCTTGTGGTTACGGAAATTTATACAGCACGGGATACGGAACGAACACTGCTGCGTTGAGTACTGCTCTGTTCAACAACGGGTTGAGCTGTGGAGCGTGTTTTCAGCTAATGTGTGTGAATGCGGGGCAGTACTGCCTGCCAGGCATAATTACGGTAACAGCCACCAATTTCTGTCCACCAGGAGGATGGTGTGATCCTCCACGCCCTCATTTTGATCTCTCTCAACCTATCTTCTTGCGCATTGCTCAATATAGAGCTGGCATAGTTCCTGTTGCCTATAGAAG......................................................................................................................GGTACCCTGCAGAAGAAGCGGAGGAATTAGATTTACAATCAATGGCCACTCTTACTTCAACTTGGTTCTTGTAACAAATGTTGGAGGTTCAGGGGATGTACATTCAGTATACATAAAGGGTTCAAGAACTCAATGGCAACCAATGTCAAGAAATTGGGGCCAAAATTGGCAGAATAACGCTTACCTTAACGGCCAAAGCTTGTCCTTTAAGGTCACTACAGGCGATGGTCGCACTGTTGTTTCATACAATGCAGCTCCTAGTTCTTGGTCATTTGGTCAGACATTTTCTGGAGGACAATTCCGTTAAAACGCAACATATTCTTTAAG-AAAAAAAATCAAAATTTTC-AAGTATACTACTTGCTAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E211454" ref_strand="+" ref_description="SGN-E211454 [cLEC-67-B7]">
      <seq>ttacggaaatttatacagcacgggatacggaacgaacactgctgcgttgagtactgctctgttcaacaacgggttgagctgtggagcgtgttttcagctaatgtgtgtgaatgcggggcagtactgcctgccaggcataattacggtaacagccaccaatttctgtccaccaggaggatggtgtgatcctccacgccctcattttgatctctctcaacctatcttcttgcgcattgctcaatatagagctggcatagttcctgttgcctatagaagggtaccctgcagaagaagcggaggaattagatttacaatcaatggccactcttacttcaacttggttcttgtaacaaatgttggaggttcaggggatgtacattcagtatacataaagggttcaagaactcaatggcaaccaatgtcaagaaattggggccaaaattggcagaataacgcttaccttaacggccaaagcttgtcctttaaggtcactacaggcgatggtcgcactgttgtttcatacaatgcagctcctagttcttggtcatttggtcagacatttttctggagggacattccgttaaaacgcaacatattctttaagaaaaaaaaatcagaattttcaaagtatactacttgcta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="-" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="76149" stop="74791"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="75849" g_stop="75574" g_length="276"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="276" r_length="276" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="75573" i_stop="75456" i_length="118">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="75455" g_stop="75091" g_length="365"/>
          <reference_exon_boundary r_type="cDNA" r_start="277" r_stop="642" r_length="366" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="-" ref_id="SGN-E211454" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>641</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E211454" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="75849" e_stop="75574"/>
          <exon e_start="75455" e_stop="75091"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTACGGAAATTTATACAGCACGGGATACGGAACGAACACTGCTGCGTTGAGTACTGCTCTGTTCAACAACGGGTTGAGCTGTGGAGCGTGTTTTCAGCTAATGTGTGTGAATGCGGGGCAGTACTGCCTGCCAGGCATAATTACGGTAACAGCCACCAATTTCTGTCCACCAGGAGGATGGTGTGATCCTCCACGCCCTCATTTTGATCTCTCTCAACCTATCTTCTTGCGCATTGCTCAATATAGAGCTGGCATAGTTCCTGTTGCCTATAGAAGGTAATTTATATTTACCCTTCTCTTTATATCGAAATTGAAACTGAGAAAGAGTATGTTCTCATAGACCGAAAAGTTTATTTGTTTATGGTAACTAAATTATTGTGTTAATGTTTTACAGGGTACCCTGCAGAAGAAGCGGAGGAATTAGATTTACAATCAATGGCCACTCTTACTTCAACTTGGTTCTTGTAACAAATGTTGGAGGTTCAGGGGATGTACATTCAGTATACATAAAGGGTTCAAGAACTCAATGGCAACCAATGTCAAGAAATTGGGGCCAAAATTGGCAGAATAACGCTTACCTTAACGGCCAAAGCTTGTCCTTTAAGGTCACTACAGGCGATGGTCGCACTGTTGTTTCATACAATGCAGCTCCTAGTTCTTGGTCATTTGGTCAGACATTT-TCTGGAGGACAATTCCGTTAAAACGCAACATATTCTTTAAGAAAAAAAAATCAGAATTTTCAAAGTATACTACTTGCTA</genome_strand>
        <mrna_strand>TTACGGAAATTTATACAGCACGGGATACGGAACGAACACTGCTGCGTTGAGTACTGCTCTGTTCAACAACGGGTTGAGCTGTGGAGCGTGTTTTCAGCTAATGTGTGTGAATGCGGGGCAGTACTGCCTGCCAGGCATAATTACGGTAACAGCCACCAATTTCTGTCCACCAGGAGGATGGTGTGATCCTCCACGCCCTCATTTTGATCTCTCTCAACCTATCTTCTTGCGCATTGCTCAATATAGAGCTGGCATAGTTCCTGTTGCCTATAGAAG......................................................................................................................GGTACCCTGCAGAAGAAGCGGAGGAATTAGATTTACAATCAATGGCCACTCTTACTTCAACTTGGTTCTTGTAACAAATGTTGGAGGTTCAGGGGATGTACATTCAGTATACATAAAGGGTTCAAGAACTCAATGGCAACCAATGTCAAGAAATTGGGGCCAAAATTGGCAGAATAACGCTTACCTTAACGGCCAAAGCTTGTCCTTTAAGGTCACTACAGGCGATGGTCGCACTGTTGTTTCATACAATGCAGCTCCTAGTTCTTGGTCATTTGGTCAGACATTTTTCTGGAGGGACATTCCGTTAAAACGCAACATATTCTTTAAGAAAAAAAAATCAGAATTTTCAAAGTATACTACTTGCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E708188" ref_strand="+" ref_description="SGN-E708188 [FA35AD02]">
      <seq>ccatatcttcatttcctaactataccctcgttcctcaagcaaacacatagaaactttatttttttgttcaaaaatggctcttttagctatccttttaatgggaatttccctcatgtttcaatcagcccatggctatggtggttggatcaatgcacatgccactttttacggtggaggagatgcttctggaactatgggtggtgcttgtggttacggaaatttatacagcacgggatacggaacgaacactgctgcgttgagtactgctctgttcaacaacgggttgagctgtggagcgtgttttcagctaatgtgtgtgaatgcggggcagtactgcctgccaggcataattacggtaacagccaccaatttctgtccaccaggaggatggtgtgatcctccacgccctcattttgatctctctcaacctatcttcttgcgcattgctcaatatagagctggcatagttcctgttgcctatagaagggtaccctgcagaagaagcggaggaattagatttacaatcaatggccactcttacttcaacttggttcttgtaacaaatgttggaggttcaggggatgtacattcagtatacataaagggttcaagaactcaatggcaaccaatgtcaagaaattggggccaaaattggcagaataacgcttaccttaacggccaaagcttgtcctttaaggtcactacaggcgatggtcgcactgttgtttcatacaatgcagctcctagttcttggtcatttggtcagacattttctggaggacaattccgttaaaacgcaacatattcttta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="-" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="76522" stop="74831"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76224" g_stop="76160" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="65" r_length="65" r_score="0.969"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76159" i_stop="76072" i_length="88">
            <donor d_prob="0.404" d_score="1.00"/>
            <acceptor a_prob="0.916" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="76071" g_stop="75940" g_length="132"/>
          <reference_exon_boundary r_type="cDNA" r_start="66" r_stop="197" r_length="132" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="75939" i_stop="75863" i_length="77">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="75862" g_stop="75574" g_length="289"/>
          <reference_exon_boundary r_type="cDNA" r_start="198" r_stop="486" r_length="289" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="75573" i_stop="75456" i_length="118">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="75455" g_stop="75131" g_length="325"/>
          <reference_exon_boundary r_type="cDNA" r_start="487" r_stop="811" r_length="325" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="-" ref_id="SGN-E708188" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>811</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E708188" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76224" e_stop="76160"/>
          <exon e_start="76071" e_stop="75940"/>
          <exon e_start="75862" e_stop="75574"/>
          <exon e_start="75455" e_stop="75131"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGATATCTTCATTTCCTAACTATACCCTCGTTCCTCAAGCAAACACATAGAAACTTTATTTTTTTGTGAGTCATTTTCCCTAGTTGTTCAATTTATTTTTTTTTATAGTAAACTGACTTCATTAGCACTAAACTTTAATTCCATCCCCTGCAGGTTCAAAAATGGCTCTTTTAGCTATCCTTTTAATGGGAATTTCCCTCATGTTTCAATCAGCCCATGGCTATGGTGGTTGGATCAATGCACATGCCACTTTTTACGGTGGAGGAGATGCTTCTGGAACTATGGGTACTACAATTTTTCACTTGAGCCTAAGCTTGTAGTCATGTAAAAAAACTACTGAAATCGTGTGTGGATTTTGACAGGTGGTGCTTGTGGTTACGGAAATTTATACAGCACGGGATACGGAACGAACACTGCTGCGTTGAGTACTGCTCTGTTCAACAACGGGTTGAGCTGTGGAGCGTGTTTTCAGCTAATGTGTGTGAATGCGGGGCAGTACTGCCTGCCAGGCATAATTACGGTAACAGCCACCAATTTCTGTCCACCAGGAGGATGGTGTGATCCTCCACGCCCTCATTTTGATCTCTCTCAACCTATCTTCTTGCGCATTGCTCAATATAGAGCTGGCATAGTTCCTGTTGCCTATAGAAGGTAATTTATATTTACCCTTCTCTTTATATCGAAATTGAAACTGAGAAAGAGTATGTTCTCATAGACCGAAAAGTTTATTTGTTTATGGTAACTAAATTATTGTGTTAATGTTTTACAGGGTACCCTGCAGAAGAAGCGGAGGAATTAGATTTACAATCAATGGCCACTCTTACTTCAACTTGGTTCTTGTAACAAATGTTGGAGGTTCAGGGGATGTACATTCAGTATACATAAAGGGTTCAAGAACTCAATGGCAACCAATGTCAAGAAATTGGGGCCAAAATTGGCAGAATAACGCTTACCTTAACGGCCAAAGCTTGTCCTTTAAGGTCACTACAGGCGATGGTCGCACTGTTGTTTCATACAATGCAGCTCCTAGTTCTTGGTCATTTGGTCAGACATTTTCTGGAGGACAATTCCGTTAAAACGCAACATATTCTTTA</genome_strand>
        <mrna_strand>CCATATCTTCATTTCCTAACTATACCCTCGTTCCTCAAGCAAACACATAGAAACTTTATTTTTTT........................................................................................GTTCAAAAATGGCTCTTTTAGCTATCCTTTTAATGGGAATTTCCCTCATGTTTCAATCAGCCCATGGCTATGGTGGTTGGATCAATGCACATGCCACTTTTTACGGTGGAGGAGATGCTTCTGGAACTATGG.............................................................................GTGGTGCTTGTGGTTACGGAAATTTATACAGCACGGGATACGGAACGAACACTGCTGCGTTGAGTACTGCTCTGTTCAACAACGGGTTGAGCTGTGGAGCGTGTTTTCAGCTAATGTGTGTGAATGCGGGGCAGTACTGCCTGCCAGGCATAATTACGGTAACAGCCACCAATTTCTGTCCACCAGGAGGATGGTGTGATCCTCCACGCCCTCATTTTGATCTCTCTCAACCTATCTTCTTGCGCATTGCTCAATATAGAGCTGGCATAGTTCCTGTTGCCTATAGAAG......................................................................................................................GGTACCCTGCAGAAGAAGCGGAGGAATTAGATTTACAATCAATGGCCACTCTTACTTCAACTTGGTTCTTGTAACAAATGTTGGAGGTTCAGGGGATGTACATTCAGTATACATAAAGGGTTCAAGAACTCAATGGCAACCAATGTCAAGAAATTGGGGCCAAAATTGGCAGAATAACGCTTACCTTAACGGCCAAAGCTTGTCCTTTAAGGTCACTACAGGCGATGGTCGCACTGTTGTTTCATACAATGCAGCTCCTAGTTCTTGGTCATTTGGTCAGACATTTTCTGGAGGACAATTCCGTTAAAACGCAACATATTCTTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E704000" ref_strand="+" ref_description="SGN-E704000 [FA23AC12]">
      <seq>cctcaagcaaacacatagaaactttatttttttgttcaaaaatggctcttttagctatccttttaatgggaatttccctcatgtttcaatcagcccatggctatggtggttggatcaatgcacatgccactttttacggtggaggagatgcttctggaactatgggtactacaatttttcacttgagcctaagcttgtagtcatgtaaaaaaactactgaaatcgtgtgtggattttgacaggtggtgcttgtggttacggaaatttatacagcacgggatacggaacgaacactgctgcgttgagtactgctctgttcaacaacgggttgagctgtggagcgtgttttcagctaatgtgtgtgaatgcggggcagtactgcctgccaggcataattacggtaacagccaccaatttctgtccaccaggaggatggtgtgatcctccacgccctcattttgatctctctcaacctatcttcttgcgcattgctcaatatagagctggcatagttcctgttgcctatagaagggtaccctgcagaagaagcggaggaattagatttacaatcaatggccactcttacttcaacttggttcttgtaacaaatgttggaggttcaggggatgtacattcagtatacataaagggttcaagaactcaatggcaaccaatgtcaagaaattggggccaaaattggcagaataacgcttaccttaacggccaaagcttgtcctttaaggtcactacaggcgatggtcgcactgttgtttcatacaatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="-" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="76492" stop="74905"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76192" g_stop="76160" g_length="33"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="33" r_length="33" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76159" i_stop="76072" i_length="88">
            <donor d_prob="0.404" d_score="0.00"/>
            <acceptor a_prob="0.916" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="76071" g_stop="75574" g_length="498"/>
          <reference_exon_boundary r_type="cDNA" r_start="34" r_stop="531" r_length="498" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="75573" i_stop="75456" i_length="118">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="75455" g_stop="75205" g_length="251"/>
          <reference_exon_boundary r_type="cDNA" r_start="532" r_stop="782" r_length="251" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="-" ref_id="SGN-E704000" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>782</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E704000" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76192" e_stop="76160"/>
          <exon e_start="76071" e_stop="75574"/>
          <exon e_start="75455" e_stop="75205"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTCAAGCAAACACATAGAAACTTTATTTTTTTGTGAGTCATTTTCCCTAGTTGTTCAATTTATTTTTTTTTATAGTAAACTGACTTCATTAGCACTAAACTTTAATTCCATCCCCTGCAGGTTCAAAAATGGCTCTTTTAGCTATCCTTTTAATGGGAATTTCCCTCATGTTTCAATCAGCCCATGGCTATGGTGGTTGGATCAATGCACATGCCACTTTTTACGGTGGAGGAGATGCTTCTGGAACTATGGGTACTACAATTTTTCACTTGAGCCTAAGCTTGTAGTCATGTAAAAAAACTACTGAAATCGTGTGTGGATTTTGACAGGTGGTGCTTGTGGTTACGGAAATTTATACAGCACGGGATACGGAACGAACACTGCTGCGTTGAGTACTGCTCTGTTCAACAACGGGTTGAGCTGTGGAGCGTGTTTTCAGCTAATGTGTGTGAATGCGGGGCAGTACTGCCTGCCAGGCATAATTACGGTAACAGCCACCAATTTCTGTCCACCAGGAGGATGGTGTGATCCTCCACGCCCTCATTTTGATCTCTCTCAACCTATCTTCTTGCGCATTGCTCAATATAGAGCTGGCATAGTTCCTGTTGCCTATAGAAGGTAATTTATATTTACCCTTCTCTTTATATCGAAATTGAAACTGAGAAAGAGTATGTTCTCATAGACCGAAAAGTTTATTTGTTTATGGTAACTAAATTATTGTGTTAATGTTTTACAGGGTACCCTGCAGAAGAAGCGGAGGAATTAGATTTACAATCAATGGCCACTCTTACTTCAACTTGGTTCTTGTAACAAATGTTGGAGGTTCAGGGGATGTACATTCAGTATACATAAAGGGTTCAAGAACTCAATGGCAACCAATGTCAAGAAATTGGGGCCAAAATTGGCAGAATAACGCTTACCTTAACGGCCAAAGCTTGTCCTTTAAGGTCACTACAGGCGATGGTCGCACTGTTGTTTCATACAATG</genome_strand>
        <mrna_strand>CCTCAAGCAAACACATAGAAACTTTATTTTTTT........................................................................................GTTCAAAAATGGCTCTTTTAGCTATCCTTTTAATGGGAATTTCCCTCATGTTTCAATCAGCCCATGGCTATGGTGGTTGGATCAATGCACATGCCACTTTTTACGGTGGAGGAGATGCTTCTGGAACTATGGGTACTACAATTTTTCACTTGAGCCTAAGCTTGTAGTCATGTAAAAAAACTACTGAAATCGTGTGTGGATTTTGACAGGTGGTGCTTGTGGTTACGGAAATTTATACAGCACGGGATACGGAACGAACACTGCTGCGTTGAGTACTGCTCTGTTCAACAACGGGTTGAGCTGTGGAGCGTGTTTTCAGCTAATGTGTGTGAATGCGGGGCAGTACTGCCTGCCAGGCATAATTACGGTAACAGCCACCAATTTCTGTCCACCAGGAGGATGGTGTGATCCTCCACGCCCTCATTTTGATCTCTCTCAACCTATCTTCTTGCGCATTGCTCAATATAGAGCTGGCATAGTTCCTGTTGCCTATAGAAG......................................................................................................................GGTACCCTGCAGAAGAAGCGGAGGAATTAGATTTACAATCAATGGCCACTCTTACTTCAACTTGGTTCTTGTAACAAATGTTGGAGGTTCAGGGGATGTACATTCAGTATACATAAAGGGTTCAAGAACTCAATGGCAACCAATGTCAAGAAATTGGGGCCAAAATTGGCAGAATAACGCTTACCTTAACGGCCAAAGCTTGTCCTTTAAGGTCACTACAGGCGATGGTCGCACTGTTGTTTCATACAATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E393254" ref_strand="+" ref_description="SGN-E393254 [TUS-38-E22]">
      <seq>cctgccaggcataattacggtaacagccaccaatttctgtccaccaggaggatggtgtgatcctccacgccctcattttgatctctctcaacctatcttcttgcgcattgctcaatatagagctggcatagttcctgttgcctatagaagggtaccctgcagaagaagcggaggaattagatttacaatcaatggccactcttacttcaacttggttcttgtaacaaatgttggaggttcaggggatgtacattcagtatacataaagggttcaagaactcaatggcaaccaatgtctataatttggggccaaaattggcagaatagcgcttagcttagcggccaaatcttgtcctttaacgtcacta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="-" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="76023" stop="74938"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="75723" g_stop="75574" g_length="150"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="150" r_length="150" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="75573" i_stop="75456" i_length="118">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="75455" g_stop="75238" g_length="218"/>
          <reference_exon_boundary r_type="cDNA" r_start="151" r_stop="368" r_length="218" r_score="0.963"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="-" ref_id="SGN-E393254" ref_strand="+">
        <total_alignment_score>0.978</total_alignment_score>
        <cumulative_length_of_scored_exons>368</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E393254" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="75723" e_stop="75574"/>
          <exon e_start="75455" e_stop="75238"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTGCCAGGCATAATTACGGTAACAGCCACCAATTTCTGTCCACCAGGAGGATGGTGTGATCCTCCACGCCCTCATTTTGATCTCTCTCAACCTATCTTCTTGCGCATTGCTCAATATAGAGCTGGCATAGTTCCTGTTGCCTATAGAAGGTAATTTATATTTACCCTTCTCTTTATATCGAAATTGAAACTGAGAAAGAGTATGTTCTCATAGACCGAAAAGTTTATTTGTTTATGGTAACTAAATTATTGTGTTAATGTTTTACAGGGTACCCTGCAGAAGAAGCGGAGGAATTAGATTTACAATCAATGGCCACTCTTACTTCAACTTGGTTCTTGTAACAAATGTTGGAGGTTCAGGGGATGTACATTCAGTATACATAAAGGGTTCAAGAACTCAATGGCAACCAATGTCAAGAAATTGGGGCCAAAATTGGCAGAATAACGCTTACCTTAACGGCCAAAGCTTGTCCTTTAAGGTCACTA</genome_strand>
        <mrna_strand>CCTGCCAGGCATAATTACGGTAACAGCCACCAATTTCTGTCCACCAGGAGGATGGTGTGATCCTCCACGCCCTCATTTTGATCTCTCTCAACCTATCTTCTTGCGCATTGCTCAATATAGAGCTGGCATAGTTCCTGTTGCCTATAGAAG......................................................................................................................GGTACCCTGCAGAAGAAGCGGAGGAATTAGATTTACAATCAATGGCCACTCTTACTTCAACTTGGTTCTTGTAACAAATGTTGGAGGTTCAGGGGATGTACATTCAGTATACATAAAGGGTTCAAGAACTCAATGGCAACCAATGTCTATAATTTGGGGCCAAAATTGGCAGAATAGCGCTTAGCTTAGCGGCCAAATCTTGTCCTTTAACGTCACTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E344318" ref_strand="+" ref_description="SGN-E344318 [cTOF-16-B15]">
      <seq>tgatatcttcatttcctaactataccctcgttcctcaagcaaacacatagaaactttatttttttgttcaaaaatggctcttttagctatccttttaatgggaatttccctcatgtttcaatcagcccatggctatggtggttggatcaatgcacatgccactttttacggtggaggagatgcttctggaactatgggtggtgcttgtggttacggaaatttatacagcacgggatacggaacgaacactgctgcgttgagtactgctctgttcaacaacgggttgagctgtggagcgtgttttcagctaatgtgtgtgaatgcggggcagtactgcctgccaggcataattacggtaacagccaccaatttctgtccaccaggaggatggtgtgatcctccacgccctcattttgatctctctcaacctatcttcttgcgcattgctcaatatagagctggcatagttcctgttgcctatagaagggtaccctgcagaagaagcggaggaattagatttacaatcaatggccactcttacttcaacttggttcttgtaacaaatgttggaggttcaagggatgtacattcagtatacataaagggttcaagaactcaatggcaaccaatgtcaagaaattggggccaaaattggca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="-" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="76524" stop="74985"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76224" g_stop="76160" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="65" r_length="65" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76159" i_stop="76072" i_length="88">
            <donor d_prob="0.404" d_score="1.00"/>
            <acceptor a_prob="0.916" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="76071" g_stop="75940" g_length="132"/>
          <reference_exon_boundary r_type="cDNA" r_start="66" r_stop="197" r_length="132" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="75939" i_stop="75863" i_length="77">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="75862" g_stop="75574" g_length="289"/>
          <reference_exon_boundary r_type="cDNA" r_start="198" r_stop="486" r_length="289" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="75573" i_stop="75456" i_length="118">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="75455" g_stop="75285" g_length="171"/>
          <reference_exon_boundary r_type="cDNA" r_start="487" r_stop="657" r_length="171" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="-" ref_id="SGN-E344318" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>657</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E344318" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76224" e_stop="76160"/>
          <exon e_start="76071" e_stop="75940"/>
          <exon e_start="75862" e_stop="75574"/>
          <exon e_start="75455" e_stop="75285"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGATATCTTCATTTCCTAACTATACCCTCGTTCCTCAAGCAAACACATAGAAACTTTATTTTTTTGTGAGTCATTTTCCCTAGTTGTTCAATTTATTTTTTTTTATAGTAAACTGACTTCATTAGCACTAAACTTTAATTCCATCCCCTGCAGGTTCAAAAATGGCTCTTTTAGCTATCCTTTTAATGGGAATTTCCCTCATGTTTCAATCAGCCCATGGCTATGGTGGTTGGATCAATGCACATGCCACTTTTTACGGTGGAGGAGATGCTTCTGGAACTATGGGTACTACAATTTTTCACTTGAGCCTAAGCTTGTAGTCATGTAAAAAAACTACTGAAATCGTGTGTGGATTTTGACAGGTGGTGCTTGTGGTTACGGAAATTTATACAGCACGGGATACGGAACGAACACTGCTGCGTTGAGTACTGCTCTGTTCAACAACGGGTTGAGCTGTGGAGCGTGTTTTCAGCTAATGTGTGTGAATGCGGGGCAGTACTGCCTGCCAGGCATAATTACGGTAACAGCCACCAATTTCTGTCCACCAGGAGGATGGTGTGATCCTCCACGCCCTCATTTTGATCTCTCTCAACCTATCTTCTTGCGCATTGCTCAATATAGAGCTGGCATAGTTCCTGTTGCCTATAGAAGGTAATTTATATTTACCCTTCTCTTTATATCGAAATTGAAACTGAGAAAGAGTATGTTCTCATAGACCGAAAAGTTTATTTGTTTATGGTAACTAAATTATTGTGTTAATGTTTTACAGGGTACCCTGCAGAAGAAGCGGAGGAATTAGATTTACAATCAATGGCCACTCTTACTTCAACTTGGTTCTTGTAACAAATGTTGGAGGTTCAGGGGATGTACATTCAGTATACATAAAGGGTTCAAGAACTCAATGGCAACCAATGTCAAGAAATTGGGGCCAAAATTGGCA</genome_strand>
        <mrna_strand>TGATATCTTCATTTCCTAACTATACCCTCGTTCCTCAAGCAAACACATAGAAACTTTATTTTTTT........................................................................................GTTCAAAAATGGCTCTTTTAGCTATCCTTTTAATGGGAATTTCCCTCATGTTTCAATCAGCCCATGGCTATGGTGGTTGGATCAATGCACATGCCACTTTTTACGGTGGAGGAGATGCTTCTGGAACTATGG.............................................................................GTGGTGCTTGTGGTTACGGAAATTTATACAGCACGGGATACGGAACGAACACTGCTGCGTTGAGTACTGCTCTGTTCAACAACGGGTTGAGCTGTGGAGCGTGTTTTCAGCTAATGTGTGTGAATGCGGGGCAGTACTGCCTGCCAGGCATAATTACGGTAACAGCCACCAATTTCTGTCCACCAGGAGGATGGTGTGATCCTCCACGCCCTCATTTTGATCTCTCTCAACCTATCTTCTTGCGCATTGCTCAATATAGAGCTGGCATAGTTCCTGTTGCCTATAGAAG......................................................................................................................GGTACCCTGCAGAAGAAGCGGAGGAATTAGATTTACAATCAATGGCCACTCTTACTTCAACTTGGTTCTTGTAACAAATGTTGGAGGTTCAAGGGATGTACATTCAGTATACATAAAGGGTTCAAGAACTCAATGGCAACCAATGTCAAGAAATTGGGGCCAAAATTGGCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E393990" ref_strand="+" ref_description="SGN-E393990 [TUS-14-K1]">
      <seq>ctcaagcaaacacatagaaactttatttttttgttcaaaaatggctcttttagctatccttttaatgggaatttccctcatgtttcaatcagcccatggctatggtggttggatcaatgcacatgccactttttacggtggaggagatgcttctggaactatgggtggtgcttgtggttacggaaatttatacagcacgggatacggaacgaacactgctgcgttgagtactgctctgttcaacaacgggttgagctgtggagcgtgttttcagctaatgtgtgtgaatgcggggcagtactgcctgccaggcataattacggtaacagccaccaatttctgtccaccaggaggatggtgtgatcctccacgccctcattttgatctctctcaacctatcttcttgcgcattgctcaatatagagctggcatagttcctgttgcctatagaagggtaccctgcagaagaagcggaggaattagatttacaatcaatggccactcttacttcaacttggttcttgtaacaaatgttggaggttcaggggatgtacattcagtatacataaagggttcaagaactcaatggcaaccaatgtcaagaaattgggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="-" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="76491" stop="74997"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76191" g_stop="76160" g_length="32"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="32" r_length="32" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76159" i_stop="76072" i_length="88">
            <donor d_prob="0.404" d_score="0.00"/>
            <acceptor a_prob="0.916" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="76071" g_stop="75940" g_length="132"/>
          <reference_exon_boundary r_type="cDNA" r_start="33" r_stop="164" r_length="132" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="75939" i_stop="75863" i_length="77">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="75862" g_stop="75574" g_length="289"/>
          <reference_exon_boundary r_type="cDNA" r_start="165" r_stop="453" r_length="289" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="75573" i_stop="75456" i_length="118">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="75455" g_stop="75297" g_length="159"/>
          <reference_exon_boundary r_type="cDNA" r_start="454" r_stop="612" r_length="159" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="-" ref_id="SGN-E393990" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>612</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E393990" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76191" e_stop="76160"/>
          <exon e_start="76071" e_stop="75940"/>
          <exon e_start="75862" e_stop="75574"/>
          <exon e_start="75455" e_stop="75297"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCAAGCAAACACATAGAAACTTTATTTTTTTGTGAGTCATTTTCCCTAGTTGTTCAATTTATTTTTTTTTATAGTAAACTGACTTCATTAGCACTAAACTTTAATTCCATCCCCTGCAGGTTCAAAAATGGCTCTTTTAGCTATCCTTTTAATGGGAATTTCCCTCATGTTTCAATCAGCCCATGGCTATGGTGGTTGGATCAATGCACATGCCACTTTTTACGGTGGAGGAGATGCTTCTGGAACTATGGGTACTACAATTTTTCACTTGAGCCTAAGCTTGTAGTCATGTAAAAAAACTACTGAAATCGTGTGTGGATTTTGACAGGTGGTGCTTGTGGTTACGGAAATTTATACAGCACGGGATACGGAACGAACACTGCTGCGTTGAGTACTGCTCTGTTCAACAACGGGTTGAGCTGTGGAGCGTGTTTTCAGCTAATGTGTGTGAATGCGGGGCAGTACTGCCTGCCAGGCATAATTACGGTAACAGCCACCAATTTCTGTCCACCAGGAGGATGGTGTGATCCTCCACGCCCTCATTTTGATCTCTCTCAACCTATCTTCTTGCGCATTGCTCAATATAGAGCTGGCATAGTTCCTGTTGCCTATAGAAGGTAATTTATATTTACCCTTCTCTTTATATCGAAATTGAAACTGAGAAAGAGTATGTTCTCATAGACCGAAAAGTTTATTTGTTTATGGTAACTAAATTATTGTGTTAATGTTTTACAGGGTACCCTGCAGAAGAAGCGGAGGAATTAGATTTACAATCAATGGCCACTCTTACTTCAACTTGGTTCTTGTAACAAATGTTGGAGGTTCAGGGGATGTACATTCAGTATACATAAAGGGTTCAAGAACTCAATGGCAACCAATGTCAAGAAATTGGGG</genome_strand>
        <mrna_strand>CTCAAGCAAACACATAGAAACTTTATTTTTTT........................................................................................GTTCAAAAATGGCTCTTTTAGCTATCCTTTTAATGGGAATTTCCCTCATGTTTCAATCAGCCCATGGCTATGGTGGTTGGATCAATGCACATGCCACTTTTTACGGTGGAGGAGATGCTTCTGGAACTATGG.............................................................................GTGGTGCTTGTGGTTACGGAAATTTATACAGCACGGGATACGGAACGAACACTGCTGCGTTGAGTACTGCTCTGTTCAACAACGGGTTGAGCTGTGGAGCGTGTTTTCAGCTAATGTGTGTGAATGCGGGGCAGTACTGCCTGCCAGGCATAATTACGGTAACAGCCACCAATTTCTGTCCACCAGGAGGATGGTGTGATCCTCCACGCCCTCATTTTGATCTCTCTCAACCTATCTTCTTGCGCATTGCTCAATATAGAGCTGGCATAGTTCCTGTTGCCTATAGAAG......................................................................................................................GGTACCCTGCAGAAGAAGCGGAGGAATTAGATTTACAATCAATGGCCACTCTTACTTCAACTTGGTTCTTGTAACAAATGTTGGAGGTTCAGGGGATGTACATTCAGTATACATAAAGGGTTCAAGAACTCAATGGCAACCAATGTCAAGAAATTGGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E201919" ref_strand="+" ref_description="SGN-E201919 [cLEC-7-A19]">
      <seq>tcaagcaaacacatagaaactttatttttttgttcaaaaatggctcttttagctatccttttaatgggaatttccctcatgtttcaatcagcccatggctatggtggttggatcaatgcacatgccactttttacggtggaggagatgcttctggaactatgggtggtgcttgtggttacggaaatttatacagcacgggatacggaacgaacactgctgcgttgagtactgctctgttcaacaacgggttgagctgtggagcgtgttttcagctaatgtgtgtgaatgcggggcagtactgcctgccaggcataattacggtaacagccaccaatttctgtccaccaggaggatggtgtgatcctccacgccctcattttgatctctctcaacctatcttcttgcgcattgctcaatatagagctggcatagttcctgttgcctatagaagggtaccctgcagaagaagcggaggaattagatttacaatcaatggccactcttacttcaacttggttcttgtaacaaatgttggaggttcaggggatgtacattcagtatacat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="-" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="76490" stop="75042"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76190" g_stop="76160" g_length="31"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="31" r_length="31" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76159" i_stop="76072" i_length="88">
            <donor d_prob="0.404" d_score="0.00"/>
            <acceptor a_prob="0.916" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="76071" g_stop="75940" g_length="132"/>
          <reference_exon_boundary r_type="cDNA" r_start="32" r_stop="163" r_length="132" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="75939" i_stop="75863" i_length="77">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="75862" g_stop="75574" g_length="289"/>
          <reference_exon_boundary r_type="cDNA" r_start="164" r_stop="452" r_length="289" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="75573" i_stop="75456" i_length="118">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="75455" g_stop="75342" g_length="114"/>
          <reference_exon_boundary r_type="cDNA" r_start="453" r_stop="566" r_length="114" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="-" ref_id="SGN-E201919" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>566</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E201919" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76190" e_stop="76160"/>
          <exon e_start="76071" e_stop="75940"/>
          <exon e_start="75862" e_stop="75574"/>
          <exon e_start="75455" e_stop="75342"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAAGCAAACACATAGAAACTTTATTTTTTTGTGAGTCATTTTCCCTAGTTGTTCAATTTATTTTTTTTTATAGTAAACTGACTTCATTAGCACTAAACTTTAATTCCATCCCCTGCAGGTTCAAAAATGGCTCTTTTAGCTATCCTTTTAATGGGAATTTCCCTCATGTTTCAATCAGCCCATGGCTATGGTGGTTGGATCAATGCACATGCCACTTTTTACGGTGGAGGAGATGCTTCTGGAACTATGGGTACTACAATTTTTCACTTGAGCCTAAGCTTGTAGTCATGTAAAAAAACTACTGAAATCGTGTGTGGATTTTGACAGGTGGTGCTTGTGGTTACGGAAATTTATACAGCACGGGATACGGAACGAACACTGCTGCGTTGAGTACTGCTCTGTTCAACAACGGGTTGAGCTGTGGAGCGTGTTTTCAGCTAATGTGTGTGAATGCGGGGCAGTACTGCCTGCCAGGCATAATTACGGTAACAGCCACCAATTTCTGTCCACCAGGAGGATGGTGTGATCCTCCACGCCCTCATTTTGATCTCTCTCAACCTATCTTCTTGCGCATTGCTCAATATAGAGCTGGCATAGTTCCTGTTGCCTATAGAAGGTAATTTATATTTACCCTTCTCTTTATATCGAAATTGAAACTGAGAAAGAGTATGTTCTCATAGACCGAAAAGTTTATTTGTTTATGGTAACTAAATTATTGTGTTAATGTTTTACAGGGTACCCTGCAGAAGAAGCGGAGGAATTAGATTTACAATCAATGGCCACTCTTACTTCAACTTGGTTCTTGTAACAAATGTTGGAGGTTCAGGGGATGTACATTCAGTATACAT</genome_strand>
        <mrna_strand>TCAAGCAAACACATAGAAACTTTATTTTTTT........................................................................................GTTCAAAAATGGCTCTTTTAGCTATCCTTTTAATGGGAATTTCCCTCATGTTTCAATCAGCCCATGGCTATGGTGGTTGGATCAATGCACATGCCACTTTTTACGGTGGAGGAGATGCTTCTGGAACTATGG.............................................................................GTGGTGCTTGTGGTTACGGAAATTTATACAGCACGGGATACGGAACGAACACTGCTGCGTTGAGTACTGCTCTGTTCAACAACGGGTTGAGCTGTGGAGCGTGTTTTCAGCTAATGTGTGTGAATGCGGGGCAGTACTGCCTGCCAGGCATAATTACGGTAACAGCCACCAATTTCTGTCCACCAGGAGGATGGTGTGATCCTCCACGCCCTCATTTTGATCTCTCTCAACCTATCTTCTTGCGCATTGCTCAATATAGAGCTGGCATAGTTCCTGTTGCCTATAGAAG......................................................................................................................GGTACCCTGCAGAAGAAGCGGAGGAATTAGATTTACAATCAATGGCCACTCTTACTTCAACTTGGTTCTTGTAACAAATGTTGGAGGTTCAGGGGATGTACATTCAGTATACAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E366452" ref_strand="+" ref_description="SGN-E366452 [cLPT-1-P6]">
      <seq>aaactttatttttttgtttaaaaatggctcttttagctctccttttaatgggaatttccctcatgtttcaatcagcccacggctatggtggttggatcaatgcgcatgccactttttacggtggaggagatgcttctggaactatgggtggtgcttgtggttacggaaatttatacagcactggatacggaacgaacactgctgcgttgagtactgctctgttcaacaacgggttgagctgtggagcgtgttttcagctaatgtgtgtgaatgcggggcagtactgcctgccaggcataattacggtaacagccaccaatttctgtccaccaagagggtggtgtgatcctccacgccctcattttgatctctctcaacctatcttcttgcgcattgctcaatatagagctggcatagttcctgttgcctacagaagggtaccctgcagaagaagtggaggaattagatttacaatcaatggccactcttacttcaacttggttcttgtaacaaatgttggaagttcangggatgtacattcagtatacat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="-" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="76371" stop="75042"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76174" g_stop="76160" g_length="15"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="15" r_length="15" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76159" i_stop="76072" i_length="88">
            <donor d_prob="0.404" d_score="0.00"/>
            <acceptor a_prob="0.916" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="76071" g_stop="75940" g_length="132"/>
          <reference_exon_boundary r_type="cDNA" r_start="16" r_stop="147" r_length="132" r_score="0.970"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="75939" i_stop="75863" i_length="77">
            <donor d_prob="0.993" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="75862" g_stop="75574" g_length="289"/>
          <reference_exon_boundary r_type="cDNA" r_start="148" r_stop="436" r_length="289" r_score="0.986"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="75573" i_stop="75456" i_length="118">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="75455" g_stop="75342" g_length="114"/>
          <reference_exon_boundary r_type="cDNA" r_start="437" r_stop="550" r_length="114" r_score="0.974"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="-" ref_id="SGN-E366452" ref_strand="+">
        <total_alignment_score>0.979</total_alignment_score>
        <cumulative_length_of_scored_exons>550</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E366452" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76174" e_stop="76160"/>
          <exon e_start="76071" e_stop="75940"/>
          <exon e_start="75862" e_stop="75574"/>
          <exon e_start="75455" e_stop="75342"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAACTTTATTTTTTTGTGAGTCATTTTCCCTAGTTGTTCAATTTATTTTTTTTTATAGTAAACTGACTTCATTAGCACTAAACTTTAATTCCATCCCCTGCAGGTTCAAAAATGGCTCTTTTAGCTATCCTTTTAATGGGAATTTCCCTCATGTTTCAATCAGCCCATGGCTATGGTGGTTGGATCAATGCACATGCCACTTTTTACGGTGGAGGAGATGCTTCTGGAACTATGGGTACTACAATTTTTCACTTGAGCCTAAGCTTGTAGTCATGTAAAAAAACTACTGAAATCGTGTGTGGATTTTGACAGGTGGTGCTTGTGGTTACGGAAATTTATACAGCACGGGATACGGAACGAACACTGCTGCGTTGAGTACTGCTCTGTTCAACAACGGGTTGAGCTGTGGAGCGTGTTTTCAGCTAATGTGTGTGAATGCGGGGCAGTACTGCCTGCCAGGCATAATTACGGTAACAGCCACCAATTTCTGTCCACCAGGAGGATGGTGTGATCCTCCACGCCCTCATTTTGATCTCTCTCAACCTATCTTCTTGCGCATTGCTCAATATAGAGCTGGCATAGTTCCTGTTGCCTATAGAAGGTAATTTATATTTACCCTTCTCTTTATATCGAAATTGAAACTGAGAAAGAGTATGTTCTCATAGACCGAAAAGTTTATTTGTTTATGGTAACTAAATTATTGTGTTAATGTTTTACAGGGTACCCTGCAGAAGAAGCGGAGGAATTAGATTTACAATCAATGGCCACTCTTACTTCAACTTGGTTCTTGTAACAAATGTTGGAGGTTCAGGGGATGTACATTCAGTATACAT</genome_strand>
        <mrna_strand>AAACTTTATTTTTTT........................................................................................GTTTAAAAATGGCTCTTTTAGCTCTCCTTTTAATGGGAATTTCCCTCATGTTTCAATCAGCCCACGGCTATGGTGGTTGGATCAATGCGCATGCCACTTTTTACGGTGGAGGAGATGCTTCTGGAACTATGG.............................................................................GTGGTGCTTGTGGTTACGGAAATTTATACAGCACTGGATACGGAACGAACACTGCTGCGTTGAGTACTGCTCTGTTCAACAACGGGTTGAGCTGTGGAGCGTGTTTTCAGCTAATGTGTGTGAATGCGGGGCAGTACTGCCTGCCAGGCATAATTACGGTAACAGCCACCAATTTCTGTCCACCAAGAGGGTGGTGTGATCCTCCACGCCCTCATTTTGATCTCTCTCAACCTATCTTCTTGCGCATTGCTCAATATAGAGCTGGCATAGTTCCTGTTGCCTACAGAAG......................................................................................................................GGTACCCTGCAGAAGAAGTGGAGGAATTAGATTTACAATCAATGGCCACTCTTACTTCAACTTGGTTCTTGTAACAAATGTTGGAAGTTCANGGGATGTACATTCAGTATACAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E245993" ref_strand="+" ref_description="SGN-E245993 [cLEF-54-E18]">
      <seq>aaacacatagaaactttatttttttgttcaaaaatggctcttttagctatccttttaatgggaatttccctcatgtttcaatcagcccatggctatggtggttggatcaatgcacatgccactttttacggtggaggagatgcttctggaactatgggtggtgcttgtggttacggaaatttatacagcacgggatacggaacgaacactgctgcgttgagtactgctctgttcaacaacgggttgagctgtggagcgtgttttcagctaatgtgtgtgaatgcggggcagtactgcctgccaggcataattacggtaacagccaccaatttctgtccaccaggaggatggtgtgatcctccacgccctcattttgatctctctcaacctatcttcttgcgcattgctcaatatagagctggcatagttcctgttgcctatagaagggtaccctgcagaagaagcggaggaattagatttacaatcaatggccactcttacttcaacttggttcttgtaacaaatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="-" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="76484" stop="75076"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76184" g_stop="76160" g_length="25"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="25" r_length="25" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76159" i_stop="76072" i_length="88">
            <donor d_prob="0.404" d_score="0.00"/>
            <acceptor a_prob="0.916" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="76071" g_stop="75940" g_length="132"/>
          <reference_exon_boundary r_type="cDNA" r_start="26" r_stop="157" r_length="132" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="75939" i_stop="75863" i_length="77">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="75862" g_stop="75574" g_length="289"/>
          <reference_exon_boundary r_type="cDNA" r_start="158" r_stop="446" r_length="289" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="75573" i_stop="75456" i_length="118">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="75455" g_stop="75376" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="447" r_stop="526" r_length="80" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="-" ref_id="SGN-E245993" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>526</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E245993" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76184" e_stop="76160"/>
          <exon e_start="76071" e_stop="75940"/>
          <exon e_start="75862" e_stop="75574"/>
          <exon e_start="75455" e_stop="75376"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAACACATAGAAACTTTATTTTTTTGTGAGTCATTTTCCCTAGTTGTTCAATTTATTTTTTTTTATAGTAAACTGACTTCATTAGCACTAAACTTTAATTCCATCCCCTGCAGGTTCAAAAATGGCTCTTTTAGCTATCCTTTTAATGGGAATTTCCCTCATGTTTCAATCAGCCCATGGCTATGGTGGTTGGATCAATGCACATGCCACTTTTTACGGTGGAGGAGATGCTTCTGGAACTATGGGTACTACAATTTTTCACTTGAGCCTAAGCTTGTAGTCATGTAAAAAAACTACTGAAATCGTGTGTGGATTTTGACAGGTGGTGCTTGTGGTTACGGAAATTTATACAGCACGGGATACGGAACGAACACTGCTGCGTTGAGTACTGCTCTGTTCAACAACGGGTTGAGCTGTGGAGCGTGTTTTCAGCTAATGTGTGTGAATGCGGGGCAGTACTGCCTGCCAGGCATAATTACGGTAACAGCCACCAATTTCTGTCCACCAGGAGGATGGTGTGATCCTCCACGCCCTCATTTTGATCTCTCTCAACCTATCTTCTTGCGCATTGCTCAATATAGAGCTGGCATAGTTCCTGTTGCCTATAGAAGGTAATTTATATTTACCCTTCTCTTTATATCGAAATTGAAACTGAGAAAGAGTATGTTCTCATAGACCGAAAAGTTTATTTGTTTATGGTAACTAAATTATTGTGTTAATGTTTTACAGGGTACCCTGCAGAAGAAGCGGAGGAATTAGATTTACAATCAATGGCCACTCTTACTTCAACTTGGTTCTTGTAACAAATG</genome_strand>
        <mrna_strand>AAACACATAGAAACTTTATTTTTTT........................................................................................GTTCAAAAATGGCTCTTTTAGCTATCCTTTTAATGGGAATTTCCCTCATGTTTCAATCAGCCCATGGCTATGGTGGTTGGATCAATGCACATGCCACTTTTTACGGTGGAGGAGATGCTTCTGGAACTATGG.............................................................................GTGGTGCTTGTGGTTACGGAAATTTATACAGCACGGGATACGGAACGAACACTGCTGCGTTGAGTACTGCTCTGTTCAACAACGGGTTGAGCTGTGGAGCGTGTTTTCAGCTAATGTGTGTGAATGCGGGGCAGTACTGCCTGCCAGGCATAATTACGGTAACAGCCACCAATTTCTGTCCACCAGGAGGATGGTGTGATCCTCCACGCCCTCATTTTGATCTCTCTCAACCTATCTTCTTGCGCATTGCTCAATATAGAGCTGGCATAGTTCCTGTTGCCTATAGAAG......................................................................................................................GGTACCCTGCAGAAGAAGCGGAGGAATTAGATTTACAATCAATGGCCACTCTTACTTCAACTTGGTTCTTGTAACAAATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E346437" ref_strand="+" ref_description="SGN-E346437 [cTOF-23-D7]">
      <seq>gcaaacacatagaaactttatttttttgttcaaaaatggctcttttagctatccttttaatgggaatttccctcatgtttcaatcagcccatggctatggtggttggatcaatgcacatgccactttttacggtggaggagatgcttctggaactatgggtactacaatttttcacttgagcctaagcttgtagtcatgtaaaaaaactactgaaatcgtgtgtggattttgacaggtggtgcttgtggttacggaaatttatacagcacgggatacggaacgaacactgctgcgttgagtactgctctgttcaacaacgggttgagctgtggagcgtgttttcagctaatgtgtgtgaatgcggggcagtactgcctgccaggcataattacggtaacagccaccaatttctgtccaccaggaggatggtgtgatcctccacgccctcattttgatctctctcaacctatcttcttgcgcattgctcaatatagagctggcatagttcctgttgcctatagaagggtaccctgcagaagaagcggaggaattagatttacaatcaatggccactcttacttcaacttggttcttgta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="-" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="76486" stop="75083"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76186" g_stop="76160" g_length="27"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="27" r_length="27" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76159" i_stop="76072" i_length="88">
            <donor d_prob="0.404" d_score="0.00"/>
            <acceptor a_prob="0.916" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="76071" g_stop="75574" g_length="498"/>
          <reference_exon_boundary r_type="cDNA" r_start="28" r_stop="525" r_length="498" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="75573" i_stop="75456" i_length="118">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="75455" g_stop="75383" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="526" r_stop="598" r_length="73" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="-" ref_id="SGN-E346437" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>598</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E346437" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76186" e_stop="76160"/>
          <exon e_start="76071" e_stop="75574"/>
          <exon e_start="75455" e_stop="75383"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAAACACATAGAAACTTTATTTTTTTGTGAGTCATTTTCCCTAGTTGTTCAATTTATTTTTTTTTATAGTAAACTGACTTCATTAGCACTAAACTTTAATTCCATCCCCTGCAGGTTCAAAAATGGCTCTTTTAGCTATCCTTTTAATGGGAATTTCCCTCATGTTTCAATCAGCCCATGGCTATGGTGGTTGGATCAATGCACATGCCACTTTTTACGGTGGAGGAGATGCTTCTGGAACTATGGGTACTACAATTTTTCACTTGAGCCTAAGCTTGTAGTCATGTAAAAAAACTACTGAAATCGTGTGTGGATTTTGACAGGTGGTGCTTGTGGTTACGGAAATTTATACAGCACGGGATACGGAACGAACACTGCTGCGTTGAGTACTGCTCTGTTCAACAACGGGTTGAGCTGTGGAGCGTGTTTTCAGCTAATGTGTGTGAATGCGGGGCAGTACTGCCTGCCAGGCATAATTACGGTAACAGCCACCAATTTCTGTCCACCAGGAGGATGGTGTGATCCTCCACGCCCTCATTTTGATCTCTCTCAACCTATCTTCTTGCGCATTGCTCAATATAGAGCTGGCATAGTTCCTGTTGCCTATAGAAGGTAATTTATATTTACCCTTCTCTTTATATCGAAATTGAAACTGAGAAAGAGTATGTTCTCATAGACCGAAAAGTTTATTTGTTTATGGTAACTAAATTATTGTGTTAATGTTTTACAGGGTACCCTGCAGAAGAAGCGGAGGAATTAGATTTACAATCAATGGCCACTCTTACTTCAACTTGGTTCTTGTA</genome_strand>
        <mrna_strand>GCAAACACATAGAAACTTTATTTTTTT........................................................................................GTTCAAAAATGGCTCTTTTAGCTATCCTTTTAATGGGAATTTCCCTCATGTTTCAATCAGCCCATGGCTATGGTGGTTGGATCAATGCACATGCCACTTTTTACGGTGGAGGAGATGCTTCTGGAACTATGGGTACTACAATTTTTCACTTGAGCCTAAGCTTGTAGTCATGTAAAAAAACTACTGAAATCGTGTGTGGATTTTGACAGGTGGTGCTTGTGGTTACGGAAATTTATACAGCACGGGATACGGAACGAACACTGCTGCGTTGAGTACTGCTCTGTTCAACAACGGGTTGAGCTGTGGAGCGTGTTTTCAGCTAATGTGTGTGAATGCGGGGCAGTACTGCCTGCCAGGCATAATTACGGTAACAGCCACCAATTTCTGTCCACCAGGAGGATGGTGTGATCCTCCACGCCCTCATTTTGATCTCTCTCAACCTATCTTCTTGCGCATTGCTCAATATAGAGCTGGCATAGTTCCTGTTGCCTATAGAAG......................................................................................................................GGTACCCTGCAGAAGAAGCGGAGGAATTAGATTTACAATCAATGGCCACTCTTACTTCAACTTGGTTCTTGTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E225542" ref_strand="-" ref_description="SGN-E225542 [cLEL-17-C17](-)">
      <seq>aaacacatagaaactttatttgggtgttcaaaaatggctcttttagctatccttttaatgggaatttccctcatgtttcaatcagcccatggctatggtggttggatcaatgcacatgccactttttacggtggaggagatgcttctggaactatgggtggtgcttgtggttacggaaatttatacagcacgggatacggaacgaacactgctgcgttgagtactgctctgttcaacaacgggttgagctgtggagcgtgttttcagctaatgtgtgtgaatgcggggcagtactgcctgccaggcataattacggtaacagccaccaatttctgtccaccaggaggatggtgtgatcctccacgccctcattttgatctctctcaacctatcttcttgcgcattgctcaatatagagctggcatagttcctgttgcctatagaagggtaccctgcagaagaagcgga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="-" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="76484" stop="75134"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76184" g_stop="76160" g_length="25"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="25" r_length="25" r_score="0.880"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76159" i_stop="76072" i_length="88">
            <donor d_prob="0.404" d_score="0.00"/>
            <acceptor a_prob="0.916" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="76071" g_stop="75940" g_length="132"/>
          <reference_exon_boundary r_type="cDNA" r_start="26" r_stop="157" r_length="132" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="75939" i_stop="75863" i_length="77">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="75862" g_stop="75574" g_length="289"/>
          <reference_exon_boundary r_type="cDNA" r_start="158" r_stop="446" r_length="289" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="75573" i_stop="75456" i_length="118">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="75455" g_stop="75434" g_length="22"/>
          <reference_exon_boundary r_type="cDNA" r_start="447" r_stop="468" r_length="22" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="-" ref_id="SGN-E225542" ref_strand="-">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>468</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E225542" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="76184" e_stop="76160"/>
          <exon e_start="76071" e_stop="75940"/>
          <exon e_start="75862" e_stop="75574"/>
          <exon e_start="75455" e_stop="75434"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAACACATAGAAACTTTATTTTTTTGTGAGTCATTTTCCCTAGTTGTTCAATTTATTTTTTTTTATAGTAAACTGACTTCATTAGCACTAAACTTTAATTCCATCCCCTGCAGGTTCAAAAATGGCTCTTTTAGCTATCCTTTTAATGGGAATTTCCCTCATGTTTCAATCAGCCCATGGCTATGGTGGTTGGATCAATGCACATGCCACTTTTTACGGTGGAGGAGATGCTTCTGGAACTATGGGTACTACAATTTTTCACTTGAGCCTAAGCTTGTAGTCATGTAAAAAAACTACTGAAATCGTGTGTGGATTTTGACAGGTGGTGCTTGTGGTTACGGAAATTTATACAGCACGGGATACGGAACGAACACTGCTGCGTTGAGTACTGCTCTGTTCAACAACGGGTTGAGCTGTGGAGCGTGTTTTCAGCTAATGTGTGTGAATGCGGGGCAGTACTGCCTGCCAGGCATAATTACGGTAACAGCCACCAATTTCTGTCCACCAGGAGGATGGTGTGATCCTCCACGCCCTCATTTTGATCTCTCTCAACCTATCTTCTTGCGCATTGCTCAATATAGAGCTGGCATAGTTCCTGTTGCCTATAGAAGGTAATTTATATTTACCCTTCTCTTTATATCGAAATTGAAACTGAGAAAGAGTATGTTCTCATAGACCGAAAAGTTTATTTGTTTATGGTAACTAAATTATTGTGTTAATGTTTTACAGGGTACCCTGCAGAAGAAGCGGA</genome_strand>
        <mrna_strand>AAACACATAGAAACTTTATTTGGGT........................................................................................GTTCAAAAATGGCTCTTTTAGCTATCCTTTTAATGGGAATTTCCCTCATGTTTCAATCAGCCCATGGCTATGGTGGTTGGATCAATGCACATGCCACTTTTTACGGTGGAGGAGATGCTTCTGGAACTATGG.............................................................................GTGGTGCTTGTGGTTACGGAAATTTATACAGCACGGGATACGGAACGAACACTGCTGCGTTGAGTACTGCTCTGTTCAACAACGGGTTGAGCTGTGGAGCGTGTTTTCAGCTAATGTGTGTGAATGCGGGGCAGTACTGCCTGCCAGGCATAATTACGGTAACAGCCACCAATTTCTGTCCACCAGGAGGATGGTGTGATCCTCCACGCCCTCATTTTGATCTCTCTCAACCTATCTTCTTGCGCATTGCTCAATATAGAGCTGGCATAGTTCCTGTTGCCTATAGAAG......................................................................................................................GGTACCCTGCAGAAGAAGCGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E225143" ref_strand="-" ref_description="SGN-E225143 [cLEL-17-C17](-)">
      <seq>ctccaaacacatagaaactttatttttttgttcaaaaatggctcttttagctatccttttaatgggaatttccctcatgtttcaatcagcccatggctatggtggttggatcaatgcacatgccactttttacggtggaggagatgcttctggaactatgggtggtgcttgtggttacggaaatttatacagcacgggatacggaacgaacactgctgcgttgagtactgctctgttcaacaacgggttgagctgtggagcgtgttttcagctaatgtgtgtgaatgcggggcagtactgcctgccaggcataattacggtaacagccaccaatttctgtccaccaggaggatggtgtgatcctccacgccctcattttgatctctctcaacctatcttcttgcgcattgctcaatatagagctggcatagttcctgctgcctatagaagggtaccct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="-" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="76485" stop="75271"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76188" g_stop="76160" g_length="29"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="29" r_length="29" r_score="0.897"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76159" i_stop="76072" i_length="88">
            <donor d_prob="0.404" d_score="0.00"/>
            <acceptor a_prob="0.916" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="76071" g_stop="75940" g_length="132"/>
          <reference_exon_boundary r_type="cDNA" r_start="30" r_stop="161" r_length="132" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="75939" i_stop="75863" i_length="77">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="75862" g_stop="75574" g_length="289"/>
          <reference_exon_boundary r_type="cDNA" r_start="162" r_stop="450" r_length="289" r_score="0.997"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="75573" i_stop="75456" i_length="118">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="75455" g_stop="75448" g_length="8"/>
          <reference_exon_boundary r_type="cDNA" r_start="451" r_stop="458" r_length="8" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="-" ref_id="SGN-E225143" ref_strand="-">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>458</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E225143" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="76188" e_stop="76160"/>
          <exon e_start="76071" e_stop="75940"/>
          <exon e_start="75862" e_stop="75574"/>
          <exon e_start="75455" e_stop="75448"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGCAAACACATAGAAACTTTATTTTTTTGTGAGTCATTTTCCCTAGTTGTTCAATTTATTTTTTTTTATAGTAAACTGACTTCATTAGCACTAAACTTTAATTCCATCCCCTGCAGGTTCAAAAATGGCTCTTTTAGCTATCCTTTTAATGGGAATTTCCCTCATGTTTCAATCAGCCCATGGCTATGGTGGTTGGATCAATGCACATGCCACTTTTTACGGTGGAGGAGATGCTTCTGGAACTATGGGTACTACAATTTTTCACTTGAGCCTAAGCTTGTAGTCATGTAAAAAAACTACTGAAATCGTGTGTGGATTTTGACAGGTGGTGCTTGTGGTTACGGAAATTTATACAGCACGGGATACGGAACGAACACTGCTGCGTTGAGTACTGCTCTGTTCAACAACGGGTTGAGCTGTGGAGCGTGTTTTCAGCTAATGTGTGTGAATGCGGGGCAGTACTGCCTGCCAGGCATAATTACGGTAACAGCCACCAATTTCTGTCCACCAGGAGGATGGTGTGATCCTCCACGCCCTCATTTTGATCTCTCTCAACCTATCTTCTTGCGCATTGCTCAATATAGAGCTGGCATAGTTCCTGTTGCCTATAGAAGGTAATTTATATTTACCCTTCTCTTTATATCGAAATTGAAACTGAGAAAGAGTATGTTCTCATAGACCGAAAAGTTTATTTGTTTATGGTAACTAAATTATTGTGTTAATGTTTTACAGGGTACCCT</genome_strand>
        <mrna_strand>CTCCAAACACATAGAAACTTTATTTTTTT........................................................................................GTTCAAAAATGGCTCTTTTAGCTATCCTTTTAATGGGAATTTCCCTCATGTTTCAATCAGCCCATGGCTATGGTGGTTGGATCAATGCACATGCCACTTTTTACGGTGGAGGAGATGCTTCTGGAACTATGG.............................................................................GTGGTGCTTGTGGTTACGGAAATTTATACAGCACGGGATACGGAACGAACACTGCTGCGTTGAGTACTGCTCTGTTCAACAACGGGTTGAGCTGTGGAGCGTGTTTTCAGCTAATGTGTGTGAATGCGGGGCAGTACTGCCTGCCAGGCATAATTACGGTAACAGCCACCAATTTCTGTCCACCAGGAGGATGGTGTGATCCTCCACGCCCTCATTTTGATCTCTCTCAACCTATCTTCTTGCGCATTGCTCAATATAGAGCTGGCATAGTTCCTGCTGCCTATAGAAG......................................................................................................................GGTACCCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E697422" ref_strand="+" ref_description="SGN-E697422 [FA02DD10]">
      <seq>ccctttaacatagaaactttatttttttgttcaaaaatggctcttttagctatccttttaatgggaatttccctcatgtctcaatcaccccatggctatggtggttggatcaatgcacatgccactttttacggtggaggagatgcttctggaactatgggtggtgcttgtggttacggaaatttatacagcacgggatacggaacgaacactgctgcgttgagtactgctctgttcaacaacgggttgagctgtggagcgtgttttcagctaatgtgtgtgaatgcggggccacactgcctgccaggcataattacggaaacacccaccaatttctgcccaccaggaagatggtgtgatcctccaccccctcattttgatctctct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="-" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="76480" stop="75336"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76187" g_stop="76160" g_length="28"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="28" r_length="28" r_score="0.786"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76159" i_stop="76072" i_length="88">
            <donor d_prob="0.404" d_score="0.00"/>
            <acceptor a_prob="0.916" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="76071" g_stop="75940" g_length="132"/>
          <reference_exon_boundary r_type="cDNA" r_start="29" r_stop="160" r_length="132" r_score="0.985"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="75939" i_stop="75863" i_length="77">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="75862" g_stop="75636" g_length="227"/>
          <reference_exon_boundary r_type="cDNA" r_start="161" r_stop="387" r_length="227" r_score="0.965"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="-" ref_id="SGN-E697422" ref_strand="+">
        <total_alignment_score>0.972</total_alignment_score>
        <cumulative_length_of_scored_exons>387</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E697422" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76187" e_stop="76160"/>
          <exon e_start="76071" e_stop="75940"/>
          <exon e_start="75862" e_stop="75636"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCAAACACATAGAAACTTTATTTTTTTGTGAGTCATTTTCCCTAGTTGTTCAATTTATTTTTTTTTATAGTAAACTGACTTCATTAGCACTAAACTTTAATTCCATCCCCTGCAGGTTCAAAAATGGCTCTTTTAGCTATCCTTTTAATGGGAATTTCCCTCATGTTTCAATCAGCCCATGGCTATGGTGGTTGGATCAATGCACATGCCACTTTTTACGGTGGAGGAGATGCTTCTGGAACTATGGGTACTACAATTTTTCACTTGAGCCTAAGCTTGTAGTCATGTAAAAAAACTACTGAAATCGTGTGTGGATTTTGACAGGTGGTGCTTGTGGTTACGGAAATTTATACAGCACGGGATACGGAACGAACACTGCTGCGTTGAGTACTGCTCTGTTCAACAACGGGTTGAGCTGTGGAGCGTGTTTTCAGCTAATGTGTGTGAATGCGGGGCAGTACTGCCTGCCAGGCATAATTACGGTAACAGCCACCAATTTCTGTCCACCAGGAGGATGGTGTGATCCTCCACGCCCTCATTTTGATCTCTCT</genome_strand>
        <mrna_strand>CCCTTTAACATAGAAACTTTATTTTTTT........................................................................................GTTCAAAAATGGCTCTTTTAGCTATCCTTTTAATGGGAATTTCCCTCATGTCTCAATCACCCCATGGCTATGGTGGTTGGATCAATGCACATGCCACTTTTTACGGTGGAGGAGATGCTTCTGGAACTATGG.............................................................................GTGGTGCTTGTGGTTACGGAAATTTATACAGCACGGGATACGGAACGAACACTGCTGCGTTGAGTACTGCTCTGTTCAACAACGGGTTGAGCTGTGGAGCGTGTTTTCAGCTAATGTGTGTGAATGCGGGGCCACACTGCCTGCCAGGCATAATTACGGAAACACCCACCAATTTCTGCCCACCAGGAAGATGGTGTGATCCTCCACCCCCTCATTTTGATCTCTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E367501" ref_strand="+" ref_description="SGN-E367501 [cLPT-7-A16]">
      <seq>tttagttcctctatttattctccacgattgctgatagcttcatttcctaactacaccctcgttcctcaagcaaacacatagaaactttatttttttgtttaaaaatggctcttttagctctccttttaatgggaatttccctcatgtttcaatcagcccacggctatggtggttggatcaatgcgcatgccactttttacggtggaggagatgcttctggaactatgggtggtgcttgtggttacggaaatttatacagcactggatacggaacgaacactgctgcgttgagtactgctctgttcaacaacgggttgagctgtggagcgtgttttcagctaatgtgtgtgaatgcggggcagtactgcctgccaggcataattacggtaacagccaccaatttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="-" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="76555" stop="75387"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76255" g_stop="76160" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="96" r_length="96" r_score="0.979"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76159" i_stop="76072" i_length="88">
            <donor d_prob="0.404" d_score="0.98"/>
            <acceptor a_prob="0.916" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="76071" g_stop="75940" g_length="132"/>
          <reference_exon_boundary r_type="cDNA" r_start="97" r_stop="228" r_length="132" r_score="0.970"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="75939" i_stop="75863" i_length="77">
            <donor d_prob="0.993" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="75862" g_stop="75687" g_length="176"/>
          <reference_exon_boundary r_type="cDNA" r_start="229" r_stop="404" r_length="176" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="-" ref_id="SGN-E367501" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>404</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E367501" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76255" e_stop="76160"/>
          <exon e_start="76071" e_stop="75940"/>
          <exon e_start="75862" e_stop="75687"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTAGTTCCTCTATTTATTCTCCACGATTGCTGATATCTTCATTTCCTAACTATACCCTCGTTCCTCAAGCAAACACATAGAAACTTTATTTTTTTGTGAGTCATTTTCCCTAGTTGTTCAATTTATTTTTTTTTATAGTAAACTGACTTCATTAGCACTAAACTTTAATTCCATCCCCTGCAGGTTCAAAAATGGCTCTTTTAGCTATCCTTTTAATGGGAATTTCCCTCATGTTTCAATCAGCCCATGGCTATGGTGGTTGGATCAATGCACATGCCACTTTTTACGGTGGAGGAGATGCTTCTGGAACTATGGGTACTACAATTTTTCACTTGAGCCTAAGCTTGTAGTCATGTAAAAAAACTACTGAAATCGTGTGTGGATTTTGACAGGTGGTGCTTGTGGTTACGGAAATTTATACAGCACGGGATACGGAACGAACACTGCTGCGTTGAGTACTGCTCTGTTCAACAACGGGTTGAGCTGTGGAGCGTGTTTTCAGCTAATGTGTGTGAATGCGGGGCAGTACTGCCTGCCAGGCATAATTACGGTAACAGCCACCAATTTC</genome_strand>
        <mrna_strand>TTTAGTTCCTCTATTTATTCTCCACGATTGCTGATAGCTTCATTTCCTAACTACACCCTCGTTCCTCAAGCAAACACATAGAAACTTTATTTTTTT........................................................................................GTTTAAAAATGGCTCTTTTAGCTCTCCTTTTAATGGGAATTTCCCTCATGTTTCAATCAGCCCACGGCTATGGTGGTTGGATCAATGCGCATGCCACTTTTTACGGTGGAGGAGATGCTTCTGGAACTATGG.............................................................................GTGGTGCTTGTGGTTACGGAAATTTATACAGCACTGGATACGGAACGAACACTGCTGCGTTGAGTACTGCTCTGTTCAACAACGGGTTGAGCTGTGGAGCGTGTTTTCAGCTAATGTGTGTGAATGCGGGGCAGTACTGCCTGCCAGGCATAATTACGGTAACAGCCACCAATTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E244470" ref_strand="+" ref_description="SGN-E244470 [cLEF-3-H9]">
      <seq>gaaactttatttttttgttcaaaaatgggtcttttagctatccttttaatgggaatttccctcatgtttcaatcagcccatggctatggtggttggatcaatgcacatgccactttttacggtggaggagatgcttctggaactatgggtggtgcttgtggttacggaaatttatacagcacgggatacggaacgaacactgctgcgttgagtactgctctgttcaacagcgggtcgagctgtggagcgagtaggcagctaatgtgtgtgaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="-" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="76371" stop="75459"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76175" g_stop="76160" g_length="16"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="16" r_length="16" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76159" i_stop="76072" i_length="88">
            <donor d_prob="0.404" d_score="0.00"/>
            <acceptor a_prob="0.916" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="76071" g_stop="75940" g_length="132"/>
          <reference_exon_boundary r_type="cDNA" r_start="17" r_stop="148" r_length="132" r_score="0.992"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="75939" i_stop="75863" i_length="77">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="75862" g_stop="75739" g_length="124"/>
          <reference_exon_boundary r_type="cDNA" r_start="149" r_stop="272" r_length="124" r_score="0.952"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="-" ref_id="SGN-E244470" ref_strand="+">
        <total_alignment_score>0.973</total_alignment_score>
        <cumulative_length_of_scored_exons>272</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E244470" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76175" e_stop="76160"/>
          <exon e_start="76071" e_stop="75940"/>
          <exon e_start="75862" e_stop="75739"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAACTTTATTTTTTTGTGAGTCATTTTCCCTAGTTGTTCAATTTATTTTTTTTTATAGTAAACTGACTTCATTAGCACTAAACTTTAATTCCATCCCCTGCAGGTTCAAAAATGGCTCTTTTAGCTATCCTTTTAATGGGAATTTCCCTCATGTTTCAATCAGCCCATGGCTATGGTGGTTGGATCAATGCACATGCCACTTTTTACGGTGGAGGAGATGCTTCTGGAACTATGGGTACTACAATTTTTCACTTGAGCCTAAGCTTGTAGTCATGTAAAAAAACTACTGAAATCGTGTGTGGATTTTGACAGGTGGTGCTTGTGGTTACGGAAATTTATACAGCACGGGATACGGAACGAACACTGCTGCGTTGAGTACTGCTCTGTTCAACAACGGGTTGAGCTGTGGAGCGTGTTTTCAGCTAATGTGTGTGAA</genome_strand>
        <mrna_strand>GAAACTTTATTTTTTT........................................................................................GTTCAAAAATGGGTCTTTTAGCTATCCTTTTAATGGGAATTTCCCTCATGTTTCAATCAGCCCATGGCTATGGTGGTTGGATCAATGCACATGCCACTTTTTACGGTGGAGGAGATGCTTCTGGAACTATGG.............................................................................GTGGTGCTTGTGGTTACGGAAATTTATACAGCACGGGATACGGAACGAACACTGCTGCGTTGAGTACTGCTCTGTTCAACAGCGGGTCGAGCTGTGGAGCGAGTAGGCAGCTAATGTGTGTGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E312572" ref_strand="+" ref_description="SGN-E312572 [cLEZ-20-E18]">
      <seq>acctttccatcggctcctaccggatatccaggtcattcatatgctcgaccagcttatgcaactggagtacatcctattggatcgtcacagcagaccaatcacattgctactggtagtcaaccttttactgtaagtcagccttttcatccatcaaccatgccgcctggaggtgttcctcctcctgggcatgcaccttatcatggttaataggctcccatggggacattgaagctgttattaatttacgctggcttaggttcttgttcagtgtcggcgtgggcttgtgatgtcatctgtataccttcagattctcttctttcttgaacttcactcttgaattttagtttttggccttcttgatgaactgagctaatgtttaatctgagtgtggattaaaatcatctgtataatgagctgcttagtaacaacggtttttcttattgacatattagtattgttactcttaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="-" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="82796" stop="74074"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82496" g_stop="82032" g_length="465"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="465" r_length="465" r_score="0.998"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82031" i_stop="81127" i_length="905">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.337" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81126" g_stop="81110" g_length="17"/>
          <reference_exon_boundary r_type="cDNA" r_start="466" r_stop="482" r_length="17" r_score="0.706"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="-" ref_id="SGN-E312572" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>482</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E312572" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82496" e_stop="82032"/>
          <exon e_start="81126" e_stop="81110"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACCTTTCCATCGGCTCCTACCGGATATCCAGGTCATTCATATGCTCCACCAGCTTATGCAACTGGAGTACATCCTATTGGATCGTCACAGCAGACCAATCACATTGCTACTGGTAGTCAACCTTTTACTGTAAGTCAGCCTTTTCATCCATCAACCATGCCGCCTGGAGGTGTTCCTCCTCCTGGGCATGCACCTTATCATGGTTAATAGGCTCCCATGGGGACATTGAAGCTGTTATTAATTTACGCTGGCTTAGGTTCTTGTTCAGTGTCGGCGTGGGCTTGTGATGTCATCTGTATACCTTCAGATTCTCTTCTTTCTTGAACTTCACTCTTGAATTTTAGTTTTTGGCCTTCTTGATGAACTGAGCTAATGTTTAATCTGAGTGTGGATTAAAATCATCTGTATAATGAGCTGCTTAGTAACAACGGTTTTTCTTATTGACATATTAGTATTGTTACTCTTATTATGCTTCCTTCTGCAAGTATTTTGCTGTCTTTATAAATTGAATAGAGATGGATCCCTGTAGTATTTGAAGTGATGTTCATAAGCGCAATAGAGTCTGAAAGAGTGGACGAGCATTGGTTCAGAATGGTGCGACTTTTTATTTTTTATTGTGTATAAATGCCAAATGGAGGTGTTTGTGGAATACATGATGTTCTGTAATATGTGCATGGTTTTGGTTTTCAGTATTAAGATGGCTAAGTTATGCCGAGTTACATGAAATAGAAGTGATGAATATGCGGATATTAGCTGCTACAATCAGATCATCACAACACTCTCCAGAGTTGACAGTAATGCTTCATTTGATTCGCTATGTTTTGCAGTCTATTATTAATTAGATTACCTCTCCGATCCGTTATTATCATTATTTCTTTTAATGTGTTGTCTGATCGTTTGATGTCTACTCTTAACATATAATAAGGACAAGTAGTCATGTCGATTCATATTATAGAAGAATCTATGAAATTCTTAAAGCTGATGACGGAAAGAAAATGGAAAAGTGAGTTGTTTGTTTTCTTCATATGCTCGTACTTCATGCAGCACTGTCCGCATCATTTATGTAATCGAGCCAACACTCGAAAATGTAAATAAATATTACTCCAAAACATTATCATATTTATACCAAATATTTTATTTTATTTATTATCTATATTTATAAGTGAAAGAAAATTTCTAAATGAATGATATCCCGTGATACATCGTGTCAAACAGGACATATTACATCTGAAGTGGACATCTCCCCCTAGTGGCACATGAGATATGATCTTGTGCTATCCAAAAAAGAACAAATTCTAAATTTTCACGTCTTACGTTGCTTCTCCATTTTGTTTACTATTTTATAATCTCCATTTGGAAAATCTACCCAGAATCACACAAAAAAATA</genome_strand>
        <mrna_strand>ACCTTTCCATCGGCTCCTACCGGATATCCAGGTCATTCATATGCTCGACCAGCTTATGCAACTGGAGTACATCCTATTGGATCGTCACAGCAGACCAATCACATTGCTACTGGTAGTCAACCTTTTACTGTAAGTCAGCCTTTTCATCCATCAACCATGCCGCCTGGAGGTGTTCCTCCTCCTGGGCATGCACCTTATCATGGTTAATAGGCTCCCATGGGGACATTGAAGCTGTTATTAATTTACGCTGGCTTAGGTTCTTGTTCAGTGTCGGCGTGGGCTTGTGATGTCATCTGTATACCTTCAGATTCTCTTCTTTCTTGAACTTCACTCTTGAATTTTAGTTTTTGGCCTTCTTGATGAACTGAGCTAATGTTTAATCTGAGTGTGGATTAAAATCATCTGTATAATGAGCTGCTTAGTAACAACGGTTTTTCTTATTGACATATTAGTATTGTTACTCTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E551809" ref_strand="+" ref_description="SGN-E551809 [cTSB-1-O20]">
      <seq>acctattggaacataaggtgttgatggatcagttttactgcagatgtaacaattgcagctgctgcaaaggacgctttagagggacactgcatatatgatggtggctattgtaagcttcatctatcatactctcgtcatactgatctgaatgtacaggtatagatatgtgcttttgagttggtttcgaagggaaaaaagatgtcccaataaataaagagtcgacaccatattttaagattctattactgaaagtatgcttcttgacacttgttgcttcctgcatctttttcatttgacctcttagcttgaattaattattcaattgtgtctaatcaggcatacagtgataaaagtagagactacacagttccagaatcaagtttgcttgcgatgcaacaagcatctgcagtccatgccgcaccagctgtttggcataatcctcagtctggtccagtgcagtcatcagctggctatgccgctactggtgctgttcctggccaagcaccaccacctgcatggaatccaaatttgcagggtggaggatcaacctttccatcggctcctaccggatatccaggtcattcatatgctccaccagcttatgcaactggagtacatcctattggatcgtcacagcagaccaatcacattgctactggtagtcaaccttttactgtaagtcagccttttcatccatcaaccatgccgcctggaggtgttcctcctcctgggcatgcaccttatcatggttaataggctcccatggggacattgaagctgttattaatttacgctggcttaggttcttgttcagtgtcggcgtgggcttgtgatgtcatctgtataccttcagattctcttctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="-" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="83342" stop="81879"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="83042" g_stop="82179" g_length="864"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="864" r_length="864" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="-" ref_id="SGN-E551809" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>864</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E551809" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="83042" e_stop="82179"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACCTATTGGAACATAAGGTGTTGATGGATCAGTTTTACTGCAGATGTAACAATTGCAGCTGCTGCAAAGGACGCTTTAGAGGGACACTGCATATATGATGGTGGCTATTGTAAGCTTCATCTATCATACTCTCGTCATACTGATCTGAATGTACAGGTATAGATATGTGCTTTTGAGTTGGTTTCGAAGGGAAAAAAGATGTCCCAATAAATAAAGAGTCGACACCATATTTTAAGATTCTATTACTGAAAGTATGCTTCTTGACACTTGTTGCTTCCTGCATCTTTTTCATTTGACCTCTTAGCTTGAATTAATTATTCAATTGTGTCTAATCAGGCATACAGTGATAAAAGTAGAGACTACACAGTTCCAGAATCAAGTTTGCTTGCGATGCAACAAGCATCTGCAGTCCATGCCGCACCAGCTGTTTGGCATAATCCTCAGTCTGGTCCAGTGCAGTCATCAGCTGGCTATGCCGCTACTGGTGCTGTTCCTGGCCAAGCACCACCACCTGCATGGAATCCAAATTTGCAGGGTGGAGGATCAACCTTTCCATCGGCTCCTACCGGATATCCAGGTCATTCATATGCTCCACCAGCTTATGCAACTGGAGTACATCCTATTGGATCGTCACAGCAGACCAATCACATTGCTACTGGTAGTCAACCTTTTACTGTAAGTCAGCCTTTTCATCCATCAACCATGCCGCCTGGAGGTGTTCCTCCTCCTGGGCATGCACCTTATCATGGTTAATAGGCTCCCATGGGGACATTGAAGCTGTTATTAATTTACGCTGGCTTAGGTTCTTGTTCAGTGTCGGCGTGGGCTTGTGATGTCATCTGTATACCTTCAGATTCTCTTCTT</genome_strand>
        <mrna_strand>ACCTATTGGAACATAAGGTGTTGATGGATCAGTTTTACTGCAGATGTAACAATTGCAGCTGCTGCAAAGGACGCTTTAGAGGGACACTGCATATATGATGGTGGCTATTGTAAGCTTCATCTATCATACTCTCGTCATACTGATCTGAATGTACAGGTATAGATATGTGCTTTTGAGTTGGTTTCGAAGGGAAAAAAGATGTCCCAATAAATAAAGAGTCGACACCATATTTTAAGATTCTATTACTGAAAGTATGCTTCTTGACACTTGTTGCTTCCTGCATCTTTTTCATTTGACCTCTTAGCTTGAATTAATTATTCAATTGTGTCTAATCAGGCATACAGTGATAAAAGTAGAGACTACACAGTTCCAGAATCAAGTTTGCTTGCGATGCAACAAGCATCTGCAGTCCATGCCGCACCAGCTGTTTGGCATAATCCTCAGTCTGGTCCAGTGCAGTCATCAGCTGGCTATGCCGCTACTGGTGCTGTTCCTGGCCAAGCACCACCACCTGCATGGAATCCAAATTTGCAGGGTGGAGGATCAACCTTTCCATCGGCTCCTACCGGATATCCAGGTCATTCATATGCTCCACCAGCTTATGCAACTGGAGTACATCCTATTGGATCGTCACAGCAGACCAATCACATTGCTACTGGTAGTCAACCTTTTACTGTAAGTCAGCCTTTTCATCCATCAACCATGCCGCCTGGAGGTGTTCCTCCTCCTGGGCATGCACCTTATCATGGTTAATAGGCTCCCATGGGGACATTGAAGCTGTTATTAATTTACGCTGGCTTAGGTTCTTGTTCAGTGTCGGCGTGGGCTTGTGATGTCATCTGTATACCTTCAGATTCTCTTCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E315217" ref_strand="+" ref_description="SGN-E315217 [cTOA-24-P2]">
      <seq>ggttttgttcaaaagattgctacttttgaaaaggctgcaggttttcaggcattgattcaatttagtgatgttgggacagcatctgctgctagagaggcattggatgggagaagtataccaaagtacctgcttccagaacatgttaatcattgtcacttgcgcatctcatattcagcacacacggatcttaatatcaagtttcaatctcatcgaagcagggtttagtgaagctcggcagctaaaacacagatgtgtttgtcatggcctcgtaggactacacaaacccttatctcccagtaaatcctactgcaatggagggggttcttcagcctgttgtaggtccagatggaaagaaaaaggaacccgagagtaatgtgctttttgcctctttagaaaatatgcagtatgctgttaccgttgatgtccttaacacggttttttctgcatttggtactgttcagaagatcgctatatttgagaagaatggtcaaacccaggcattagttcagtatcctgatgtaacaattgcagctgctgcnaaggacgctttagagggacactgcatatatgatggtggctattgcatacagtgantaaagtagagactacacagttccagaatcaagtttgcttgcgatgncaacagcatctgcagtccatgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="-" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="88906" stop="82327"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="88606" g_stop="88559" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="48" r_length="48" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="88558" i_stop="88463" i_length="96">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="88462" g_stop="88389" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="49" r_stop="122" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="88388" i_stop="87115" i_length="1274">
            <donor d_prob="0.689" d_score="1.00"/>
            <acceptor a_prob="0.907" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="87114" g_stop="87019" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="123" r_stop="218" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="87018" i_stop="86852" i_length="167">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="86851" g_stop="86799" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="219" r_stop="271" r_length="53" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="86798" i_stop="85640" i_length="1159">
            <donor d_prob="0.716" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="85639" g_stop="85582" g_length="58"/>
          <reference_exon_boundary r_type="cDNA" r_start="272" r_stop="329" r_length="58" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="85581" i_stop="85511" i_length="71">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.718" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="85510" g_stop="85406" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="330" r_stop="434" r_length="105" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="85405" i_stop="85314" i_length="92">
            <donor d_prob="0.975" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="85313" g_stop="85232" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="435" r_stop="516" r_length="82" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="85231" i_stop="83000" i_length="2232">
            <donor d_prob="0.963" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="82999" g_stop="82934" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="517" r_stop="582" r_length="66" r_score="0.985"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="82933" i_stop="82707" i_length="227">
            <donor d_prob="0.965" d_score="0.98"/>
            <acceptor a_prob="0.997" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="82706" g_stop="82627" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="583" r_stop="662" r_length="80" r_score="0.925"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="-" ref_id="SGN-E315217" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>662</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E315217" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="88606" e_stop="88559"/>
          <exon e_start="88462" e_stop="88389"/>
          <exon e_start="87114" e_stop="87019"/>
          <exon e_start="86851" e_stop="86799"/>
          <exon e_start="85639" e_stop="85582"/>
          <exon e_start="85510" e_stop="85406"/>
          <exon e_start="85313" e_stop="85232"/>
          <exon e_start="82999" e_stop="82934"/>
          <exon e_start="82706" e_stop="82627"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTTTTGTTCAAAAGATTGCTACTTTTGAAAAGGCTGCAGGTTTTCAGGTCCGTATGTCTGTGGACCAATGAGTTTTGGCTTTTTCTTAATTTTGGGTGGATGAAATGGCAGATTGCTAATGAGTTTCTCTTACATCTTGACAGGCATTGATTCAATTTAGTGATGTTGGGACAGCATCTGCTGCTAGAGAGGCATTGGATGGGAGAAGTATACCAAAGTATGGCTAGTCCTTTGTTTGAACATACCTTGGATTTATTCAACTTGCTTTCCACTTTACGTTTGATTAATTAGTGTACTTGCCCGCGCAAAGCGCGGTCATAGAATCTTATGACAGAAAGCATATGTGGAGAGCATTTCAGATTAAATATATGAAATAATTCAGTTAAACAGTATAGGTGAACGTGACTTAACAAAACATAATAAATAGAAGAATAACAGAAAAGAGAACAAATATCAAGTTAAGAATCTGGAGGATGTAACCCTAGAATGTTTTTGCCTTTCCTTCTTCTAAGGCATTGCTTGTATTTTTCTTTCAATATGAATTATGGACACTTATATTTTCATAAAGTTGATATTATTTTTGTTTTGCTCGCATGCCTTGTGTCTATAATCCAAGGAAATGGGTGATTTATGATGAGGTTACTCATCGTATTAGAGTATCGTAGATGAAATAAAGGCTTACATTCGGTCTCCTGTGTGATAAGAATGTGCTGCCAATGGTTTTCTCAAAAAAAAAAAAAAAAAGAAAAGAAAGTGCTACCAAGGATGTGACCTAGTGGTCAATGTAGTGGTTGAGAGCCATAAGGTCTCAGATTCGAATACCAGTAGAGACAAAAAATACTAGGTGATTCTTTACATCTATAGTTCATGGTGGACAGAGTTACCTTGTAACTATTGCTGGTAGGAGGTGATAGGTATCCCGTGGAATTTGTCGAGCACGAAAGCTGGCTTGGACACCACAGCCATAAAATAATAATAATAAGTGGAATGATTAAAAGAGAAACAGTGAAGACATATCATATAAAAAGAAACAACCCAACTTTAGGAATTTAGTTAAAAAGGCCAAGAAGTCCCTTTTTGTTAGCTGTCAGGAGTACTTTAAGGTTATTTTGAGTAAATTAAAAGTGGGTACCATGCTTACCTGCTATCTTCCTATATATAGAGAGATGCCTTTAAGCAATAATGGATTCTAGTAAAGAATTGTTTCATTTTTAAAATAAAACCTCTAACTAACTAGAAAGTAACTGAAAGAGTTAATGTTGTTAAATGCCTTTCTCTTTTAATTCAGCAATGAATGTACACGATTATAGATTTATTGAAATAGTGAATCTTATTTTTCAACAAATATTTTGAGGGTAAAATAAGAGAAGTCAAAAAATTGACAAAAAAGATAAAAACCAGTAGGCGAGGTGCCACATCACCTCCTTGTTACCTAGTTTTTTATACAGATAGAATTTTGGGATAGAATCCTAACTTTAATTTTTATCTCAGGTACCTGCTTCCAGAACATGTTAATCATTGTCACTTGCGCATCTCATATTCAGCACACACGGATCTTAATATCAAGTTTCAATCTCATCGAAGCAGGTAACACAGATTTACCTAGACAGCTTTTTGTATATATGACTTTGTTTCTTTATATTCTTATTGTTATTGCTATACTTGCTTGCATTTTTCTTTGCTAATTTTATCATTATCTGCTTTTGGTTTACAGTTGAGGTGTTCTCTAATTTTTTATGCTTCTTGTCATCTAGGGTTTAGTGAAGCTCGGCAGCTAAAACACAGATGTGTTTGTCATGGCCTCGTAGTAATTTTCTTTATCTCATAATAGTGGTTAACAGCGTTCTTCTCATTTCCCATTTAGATGACCATGTGAAGATCCTTGTTTTATACTGAGTTCATGGTTTGGAGAATGCTTGTCTATTTTTGTAAGAATCACTTACTGTGTATTCATTTCAAATACGTTAGTTGAGTATATTGCCTTTGGTAAAGAAATATGAATCGATGAATGTTGACTTTTATTTGTATCTGGCATCACTTATCGTGGGGATCTAGTTAGCAGACAAAAACACGGGATATAAGTTAGATGAGTATATTTGCCTTTGGTTAAGAACCTCTGTGATGTTTATTGTGTTCCTGGTGTCTCTTCCAGTGTCACATCTACTTACCGGTGCATTGGAAGGTATGCATGAAAACTGATGTGGAAAACTATTAGGTTGATATAGGGATAAGAGTGAGAGTTTATAGAATATATTTTTAGTGAATTCCTGATTTCTGTAAAATGTAATCTATTTGTCCATTTTACATGACATTCATTCCATTCTTTGATGGCTTAAAGGTTTGATGATATTCCTTTTTATATAACTCTCCCATCTTTCAAGAACTAGTATCATAAACTATTCAAATTTTAAACTTTGATGTGATATTATGTCTGTAAGTCTTAACTTTTCAACCACTAAATTAGTTTAGTTCACTATCATCAATATTATATAGAATTCAAATTAACATCTTAATTTTCTTTACAAGTCAAGCATCATCATATAACAAGGCATGGACGAGTTATTTAGTGCTGGAGCGAAACCAGTCCAATAGAGCTGATTGAATATAGATGATGCACCTACTAATTTGGAGTTGATGCATACTTGATTGATCGATTGATTTCGAGTTCTTCATCTGAATAGTCATATGAACTGAGCTTTTAGAGTGTGCTATGGGGTAGCATTTTGTTTTGTAGTTATTTTGTGGTATAGTTGCTGTGGTAATTCCATAATGGTGATCTTTGTTTAATAGCAGTGTTTTTGCACTTATCATTGCCTTCAAGATATATAATGTGTCTAATTCAACCTTTTGGGGAAATATGTATTTCAGAGTTTGCCAAATTTCAGGATTATATAATTTAGTCGATCTGATATTCTAGAAGCTTACATCAGTTTGATTCACATTTAATTCCTTCTTTTATTGTATAGGGACTACACAAACCCTTATCTCCCAGTAAATCCTACTGCAATGGAGGGGGTTCTTCAGGTATGTTCCTTTCCTCATTTTATTTGTTGTCATCCTTGTATAGGAGAAGTCCTCACAAGGTCTGTATTCAGCCTGTTGTAGGTCCAGATGGAAAGAAAAAGGAACCCGAGAGTAATGTGCTTTTTGCCTCTTTAGAAAATATGCAGTATGCTGTTACCGTTGATGTCCTTAACACGGTATTTTTTCTCTTGTTATTTCATTGATGCCCATTATGATAATTGTGTAGTTATTCAATTTTACTCTTCTGTTATATTCTGCCCGGAAACAGGTTTTTTCTGCATTTGGTACTGTTCAGAAGATCGCTATATTTGAGAAGAATGGTCAAACCCAGGCATTAGTTCAGTATCCTGGTATGTATGGATTATGAATGTTGTTCTTTGGTAGTTTAATCAACTACCTGTGTATACTTGGTCTAGCCTTTAAAGTTTATTGTGGCTTTTTTAATTTCTTCATCTCTTCTTTTACTCTTTCCTCACCCCAATAAGAATTGAGTTACTTGAAAGAAAACAAGAAAATAATGTGGAAATAAAAATATGAAGGATAGAGATTTGCAAAATTTGAGAATAAAATTCCTAAACTTCAAAATGAAGTGCTAAGAAGTAAGGACCCCGAGGCTCTCTTAACCCATGCTTATCGATGTCTTTTTTTGTTTTTTTATGAGGTATGCCTATCAATGTGTTTATAGGCCATGTATTGCTAATACTATGGTTTGCTATGTATTAGTCATATACCTTATAATATTGAATATGGTAAAAATCCTACCAAACATAGGATTAAATAATATCATGATTAAATACACTATACATGTGTTGAATTCTCTAATACAAAATTCCGAATCACCCCTAGTTGGTCTTAATATTCAAAAAATAGCTGATTAAAGTTAATTCTTATACCAATATAGTCAATTCAAGAACTTAAATAACAGGGTAGATCTCGATTTCGAAGAATTAGAGATAAATAATTAGTATAAAACTAATTACCTTTCTACTTTACTTTAATAAAAATCCGAAGGTATCAAGTTAAGAATTAATCTTACATCCAAGAAGATGTTTCCCATAAGGTTGCAAGATCAATTCATAGTTACCTCACAACACACAAATGTGTAAAAAGAAGAAACATCTCTCAAATAATATTCTCAAAAGTATCAAATCCACTCTTTTATATAGGGGAAAACTATTCAAAATAATATGAGATCTAAATACTAAAACCTAACTATAGAAAACTTTGATCTCGGAAAGCACGCAAAATGATGCCGAACTTCTTTCCTAACGAAATAAGGAAAAAGTTGCCGAACTTTTAAACATATGGACATGACTTCTCCATCCATTTTTGACAAGGATTTAAGCTCACTTTTGGGCAGAATTTTCAGCCCTATGTGGGCTTGGTTGTAATTTTTTGGGCTCATATGGACCCTATTCTTCCTCGTCTTGGGCTTGGACTTGGATCTAGATCATGGAATATGTGTAGCACTTGGCCCATTCTTCTTCGCAATTCTTGGACTCATTCTTGTGCTCTTCTTCCACAATAAACATCTTGATTTTCATTGAGGTTCGTCAATCTTTAATGGAAGTATGCCACCATGGATGCTATCAAATCCTCTTTGATGGTTGTGGCCATTGGCTTGGTCTTGAGAAATATATGTGAGGGCAGTAAGGAGTTATACTTGAACAACTGGCTAGCTTCAGAGAATGATTCTATTAACATTCCCATATACAAATACACTGCAAACCTTCATCGTCCTGCATGGATGTACATGATCTATTTTGCATTAGAATCATTTATGTGAGTAACCGTATTTTCAATCACCTCATGTTTATTGTAGATCAGGTTTCCTGCAGAATGCACAACAGCCAACTTATACTGAATATGATTTTGGATGTGAGGATACTCTAAAGCCTTAAAAATCAGCCGGAACTGCCAGTAAATGGTCTCTATAAATGTGTTCAAGTATTTTCCAAGGAAATTTGTGCGTCGTCGTTTCAGTCTTCTAATGGATAATTTTATCCATGCACCCAAGGGTGTGGCACAACAGTCAATCTGGGTGAAAACTATGGGGGCCAAAGTTCAAATTATGATATAGACAAAAAGAAAATGCTTCACTAGATAATTTATTCTCTTCTGAGTTCTGCCTAAGCCTTGGTGGACAATATTACTCAATAATTGTATATTTGGGAGGTAATTGGTGCATATTTATATAATCAGAACCCATGATTTTTGACACAGTATATATATATGTAAAAATCTACTAAAATATTAACATATATTAAACCTGAACCCATGACTTTATTAATAGTACAATGAGTTCAATGCAAGGTTGAACCTAGTAAGTGTAAATCTTGGATCGCCTCTAGAAATAGTCGAGCTGCAAAATCTGACCCAAATACTACTGTTATCAGTTATATAGTTAGAAAGAAGAGTAGTGCACATTCTGCTATCTTACATTAGGCATTAACAGATGCGTTTGTAAACATATCTTTAAGTGCACATTCAACTATCGTTTTTCCTTTTTTTTCCATGTCATCCTTTTCAATGAAGTTGAACCTATTGGAACATAAGGTGTTGATGGATCAGTTTTACTGCAGATGTAACAATTGCAGCTGCTGCAAAGGACGCTTTAGAGGGACACTGCATATATGATGGTGGCTATTGTAAGCTTCATCTATCATACTCTCGTCATACTGATCTGAATGTACAGGTATAGATATGTGCTTTTGAGTTGGTTTCGAAGGGAAAAAAGATGTCCCAATAAATAAAGAGTCGACACCATATTTTAAGATTCTATTACTGAAAGTATGCTTCTTGACACTTGTTGCTTCCTGCATCTTTTTCATTTGACCTCTTAGCTTGAATTAATTATTCAATTGTGTCTAATCAGGCATACAGTGATAAAAGTAGAGACTACACAGTTCCAGAATCAAGTTTGCTTGCGATGCAACAAGCATCTGCAGTCCATGC</genome_strand>
        <mrna_strand>GGTTTTGTTCAAAAGATTGCTACTTTTGAAAAGGCTGCAGGTTTTCAG................................................................................................GCATTGATTCAATTTAGTGATGTTGGGACAGCATCTGCTGCTAGAGAGGCATTGGATGGGAGAAGTATACCAAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACCTGCTTCCAGAACATGTTAATCATTGTCACTTGCGCATCTCATATTCAGCACACACGGATCTTAATATCAAGTTTCAATCTCATCGAAGCAG.......................................................................................................................................................................GGTTTAGTGAAGCTCGGCAGCTAAAACACAGATGTGTTTGTCATGGCCTCGTA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGACTACACAAACCCTTATCTCCCAGTAAATCCTACTGCAATGGAGGGGGTTCTTCAG.......................................................................CCTGTTGTAGGTCCAGATGGAAAGAAAAAGGAACCCGAGAGTAATGTGCTTTTTGCCTCTTTAGAAAATATGCAGTATGCTGTTACCGTTGATGTCCTTAACACG............................................................................................GTTTTTTCTGCATTTGGTACTGTTCAGAAGATCGCTATATTTGAGAAGAATGGTCAAACCCAGGCATTAGTTCAGTATCCTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTAACAATTGCAGCTGCTGCNAAGGACGCTTTAGAGGGACACTGCATATATGATGGTGGCTATT...................................................................................................................................................................................................................................GCATACAGTGANTAAAGTAGAGACTACACAGTTCCAGAATCAAGTTTGCTTGCGATGNCAACAGCATCTGCAGTCCATGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E592238" ref_strand="+" ref_description="SGN-E592238 [45967]">
      <seq>ggaaatgttttgctggtgactatcgagggtgttgaagctggtgatgtcagtatcgatgtcattcatttggtattttcagcctttggttttgttcaaaagatcgctacttttgagaaggctgcaggttttcaggcattgattcaatttagtgatgttgggacagcatctgctgctagagaggcattggatgggagaagtataccaaagtaccttcttccagaacatgttaatcattgtcacttgcgcatctcatattcagcacacacggatcttaatatcaagtttcaatctcatcgaagcagggactacacaaacccttatctcccagtaaatcctactgcaatggagggggttcttcagcctgttgtaggtccagatggaaagaaaaaggaacccgagagtaatgtgctttttgcctctttagaaaatatgcagtatgctgttaccgtcgatgtccttaacacggttttctctgcatttggtactgttcagaagattgctatatttgaggaagaatggtcaaacccaggcattaattcagtatcctgatgtaacaattgcagctgctgcaaaggacgctttagagggacactgcatatatgatggtggctattgtaagcttcatctatcatactctcgtcatactgatctgaatgtacaggcatacagtgacaaaagtagagactacacagttccaggaatcaaggtttgcttgcgatgcaacaagcatctgcagtcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="-" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="89691" stop="82331"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="89391" g_stop="89323" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="69" r_length="69" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="89322" i_stop="88622" i_length="701">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.927" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="88621" g_stop="88559" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="70" r_stop="132" r_length="63" r_score="0.968"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="88558" i_stop="88463" i_length="96">
            <donor d_prob="0.978" d_score="0.96"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="88462" g_stop="88389" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="133" r_stop="206" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="88388" i_stop="87115" i_length="1274">
            <donor d_prob="0.689" d_score="1.00"/>
            <acceptor a_prob="0.907" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="87114" g_stop="87019" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="207" r_stop="302" r_length="96" r_score="0.990"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="87018" i_stop="85640" i_length="1379">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="85639" g_stop="85582" g_length="58"/>
          <reference_exon_boundary r_type="cDNA" r_start="303" r_stop="360" r_length="58" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="85581" i_stop="85511" i_length="71">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.718" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="85510" g_stop="85406" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="361" r_stop="465" r_length="105" r_score="0.990"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="85405" i_stop="85314" i_length="92">
            <donor d_prob="0.975" d_score="0.98"/>
            <acceptor a_prob="0.995" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="85313" g_stop="85232" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="466" r_stop="548" r_length="83" r_score="0.939"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="85231" i_stop="83000" i_length="2232">
            <donor d_prob="0.963" d_score="0.94"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="82999" g_stop="82887" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="549" r_stop="661" r_length="113" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="82886" i_stop="82707" i_length="180">
            <donor d_prob="0.475" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="82706" g_stop="82631" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="662" r_stop="739" r_length="78" r_score="0.934"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="-" ref_id="SGN-E592238" ref_strand="+">
        <total_alignment_score>0.981</total_alignment_score>
        <cumulative_length_of_scored_exons>736</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E592238" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="89391" e_stop="89323"/>
          <exon e_start="88621" e_stop="88559"/>
          <exon e_start="88462" e_stop="88389"/>
          <exon e_start="87114" e_stop="87019"/>
          <exon e_start="85639" e_stop="85582"/>
          <exon e_start="85510" e_stop="85406"/>
          <exon e_start="85313" e_stop="85232"/>
          <exon e_start="82999" e_stop="82887"/>
          <exon e_start="82706" e_stop="82631"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAAATGTTTTGCTGGTGACTATCGAGGGTGTTGAAGCTGGTGATGTCAGTATCGATGTCATTCATTTGGTGAGTGTCTTGTTGCTTTCTCTCCTCTTTATGGAGAAAATATTTCCAAGTAAGCTAATTCAGGACTTATGGACTGTTCAGAAGTCGTGCCTTATCAAGAGTTAAGTATTCATCCAATAATCCTTAATAACATTTTGAACACAGCATGACTCCCGAAGAATTTTGTAGTTTGATACAAGTCCCCCTGAAAAAAGGAAAAAACACAACTAGTGGACTTCAATGAAGAATATTGTTATGTTGCTTTGTGTTAAAATATATTCTCTTATCTTTTCTTGTTTTAAAATATATTTTCTCTAGCATAGCAGTTTGTTCTTGGGACATTCTTCTAGTCTCTTGGAGCCTTTACTGCTTTCAGTAGCCTGAAACCCTAAGCTATGGTTCAGATTTTAGAAGAGCTAAATCTTACTTATTGTTTCACTTTCATCGCATATAACAACATTAGATGATGGTAGTGTTAACTAAAGTTGATTGAATCACAGATGGTCATTATTTAAGATCTTTTGTTGGAGACATTCTGGATATGTAATCATGTCGGTCATAAACCTTTCTATGGCTTGCATATACAGGTGTTACTCTGCACTCACAATTTAGTTCCTTTGTGTTTCTTCTTCAATGTGTTTTCGGAAACATAGTACACGTTGATAGTCCTTTATTACCTTCCTCTGTCTGATTTACTTTTAACGGGCCAAAACCCATTTCAGGTATTTTCAGCCTTTGGTTTTGTTCAAAAGATTGCTACTTTTGAAAAGGCTGCAGGTTTTCAGGTCCGTATGTCTGTGGACCAATGAGTTTTGGCTTTTTCTTAATTTTGGGTGGATGAAATGGCAGATTGCTAATGAGTTTCTCTTACATCTTGACAGGCATTGATTCAATTTAGTGATGTTGGGACAGCATCTGCTGCTAGAGAGGCATTGGATGGGAGAAGTATACCAAAGTATGGCTAGTCCTTTGTTTGAACATACCTTGGATTTATTCAACTTGCTTTCCACTTTACGTTTGATTAATTAGTGTACTTGCCCGCGCAAAGCGCGGTCATAGAATCTTATGACAGAAAGCATATGTGGAGAGCATTTCAGATTAAATATATGAAATAATTCAGTTAAACAGTATAGGTGAACGTGACTTAACAAAACATAATAAATAGAAGAATAACAGAAAAGAGAACAAATATCAAGTTAAGAATCTGGAGGATGTAACCCTAGAATGTTTTTGCCTTTCCTTCTTCTAAGGCATTGCTTGTATTTTTCTTTCAATATGAATTATGGACACTTATATTTTCATAAAGTTGATATTATTTTTGTTTTGCTCGCATGCCTTGTGTCTATAATCCAAGGAAATGGGTGATTTATGATGAGGTTACTCATCGTATTAGAGTATCGTAGATGAAATAAAGGCTTACATTCGGTCTCCTGTGTGATAAGAATGTGCTGCCAATGGTTTTCTCAAAAAAAAAAAAAAAAAGAAAAGAAAGTGCTACCAAGGATGTGACCTAGTGGTCAATGTAGTGGTTGAGAGCCATAAGGTCTCAGATTCGAATACCAGTAGAGACAAAAAATACTAGGTGATTCTTTACATCTATAGTTCATGGTGGACAGAGTTACCTTGTAACTATTGCTGGTAGGAGGTGATAGGTATCCCGTGGAATTTGTCGAGCACGAAAGCTGGCTTGGACACCACAGCCATAAAATAATAATAATAAGTGGAATGATTAAAAGAGAAACAGTGAAGACATATCATATAAAAAGAAACAACCCAACTTTAGGAATTTAGTTAAAAAGGCCAAGAAGTCCCTTTTTGTTAGCTGTCAGGAGTACTTTAAGGTTATTTTGAGTAAATTAAAAGTGGGTACCATGCTTACCTGCTATCTTCCTATATATAGAGAGATGCCTTTAAGCAATAATGGATTCTAGTAAAGAATTGTTTCATTTTTAAAATAAAACCTCTAACTAACTAGAAAGTAACTGAAAGAGTTAATGTTGTTAAATGCCTTTCTCTTTTAATTCAGCAATGAATGTACACGATTATAGATTTATTGAAATAGTGAATCTTATTTTTCAACAAATATTTTGAGGGTAAAATAAGAGAAGTCAAAAAATTGACAAAAAAGATAAAAACCAGTAGGCGAGGTGCCACATCACCTCCTTGTTACCTAGTTTTTTATACAGATAGAATTTTGGGATAGAATCCTAACTTTAATTTTTATCTCAGGTACCTGCTTCCAGAACATGTTAATCATTGTCACTTGCGCATCTCATATTCAGCACACACGGATCTTAATATCAAGTTTCAATCTCATCGAAGCAGGTAACACAGATTTACCTAGACAGCTTTTTGTATATATGACTTTGTTTCTTTATATTCTTATTGTTATTGCTATACTTGCTTGCATTTTTCTTTGCTAATTTTATCATTATCTGCTTTTGGTTTACAGTTGAGGTGTTCTCTAATTTTTTATGCTTCTTGTCATCTAGGGTTTAGTGAAGCTCGGCAGCTAAAACACAGATGTGTTTGTCATGGCCTCGTAGTAATTTTCTTTATCTCATAATAGTGGTTAACAGCGTTCTTCTCATTTCCCATTTAGATGACCATGTGAAGATCCTTGTTTTATACTGAGTTCATGGTTTGGAGAATGCTTGTCTATTTTTGTAAGAATCACTTACTGTGTATTCATTTCAAATACGTTAGTTGAGTATATTGCCTTTGGTAAAGAAATATGAATCGATGAATGTTGACTTTTATTTGTATCTGGCATCACTTATCGTGGGGATCTAGTTAGCAGACAAAAACACGGGATATAAGTTAGATGAGTATATTTGCCTTTGGTTAAGAACCTCTGTGATGTTTATTGTGTTCCTGGTGTCTCTTCCAGTGTCACATCTACTTACCGGTGCATTGGAAGGTATGCATGAAAACTGATGTGGAAAACTATTAGGTTGATATAGGGATAAGAGTGAGAGTTTATAGAATATATTTTTAGTGAATTCCTGATTTCTGTAAAATGTAATCTATTTGTCCATTTTACATGACATTCATTCCATTCTTTGATGGCTTAAAGGTTTGATGATATTCCTTTTTATATAACTCTCCCATCTTTCAAGAACTAGTATCATAAACTATTCAAATTTTAAACTTTGATGTGATATTATGTCTGTAAGTCTTAACTTTTCAACCACTAAATTAGTTTAGTTCACTATCATCAATATTATATAGAATTCAAATTAACATCTTAATTTTCTTTACAAGTCAAGCATCATCATATAACAAGGCATGGACGAGTTATTTAGTGCTGGAGCGAAACCAGTCCAATAGAGCTGATTGAATATAGATGATGCACCTACTAATTTGGAGTTGATGCATACTTGATTGATCGATTGATTTCGAGTTCTTCATCTGAATAGTCATATGAACTGAGCTTTTAGAGTGTGCTATGGGGTAGCATTTTGTTTTGTAGTTATTTTGTGGTATAGTTGCTGTGGTAATTCCATAATGGTGATCTTTGTTTAATAGCAGTGTTTTTGCACTTATCATTGCCTTCAAGATATATAATGTGTCTAATTCAACCTTTTGGGGAAATATGTATTTCAGAGTTTGCCAAATTTCAGGATTATATAATTTAGTCGATCTGATATTCTAGAAGCTTACATCAGTTTGATTCACATTTAATTCCTTCTTTTATTGTATAGGGACTACACAAACCCTTATCTCCCAGTAAATCCTACTGCAATGGAGGGGGTTCTTCAGGTATGTTCCTTTCCTCATTTTATTTGTTGTCATCCTTGTATAGGAGAAGTCCTCACAAGGTCTGTATTCAGCCTGTTGTAGGTCCAGATGGAAAGAAAAAGGAACCCGAGAGTAATGTGCTTTTTGCCTCTTTAGAAAATATGCAGTATGCTGTTACCGTTGATGTCCTTAACACGGTATTTTTTCTCTTGTTATTTCATTGATGCCCATTATGATAATTGTGTAGTTATTCAATTTTACTCTTCTGTTATATTCTGCCCGGAAACAGGTTTTTTCTGCATTTGGTACTGTTCAGAAGATCGCTATATTTGA-GAAGAATGGTCAAACCCAGGCATTAGTTCAGTATCCTGGTATGTATGGATTATGAATGTTGTTCTTTGGTAGTTTAATCAACTACCTGTGTATACTTGGTCTAGCCTTTAAAGTTTATTGTGGCTTTTTTAATTTCTTCATCTCTTCTTTTACTCTTTCCTCACCCCAATAAGAATTGAGTTACTTGAAAGAAAACAAGAAAATAATGTGGAAATAAAAATATGAAGGATAGAGATTTGCAAAATTTGAGAATAAAATTCCTAAACTTCAAAATGAAGTGCTAAGAAGTAAGGACCCCGAGGCTCTCTTAACCCATGCTTATCGATGTCTTTTTTTGTTTTTTTATGAGGTATGCCTATCAATGTGTTTATAGGCCATGTATTGCTAATACTATGGTTTGCTATGTATTAGTCATATACCTTATAATATTGAATATGGTAAAAATCCTACCAAACATAGGATTAAATAATATCATGATTAAATACACTATACATGTGTTGAATTCTCTAATACAAAATTCCGAATCACCCCTAGTTGGTCTTAATATTCAAAAAATAGCTGATTAAAGTTAATTCTTATACCAATATAGTCAATTCAAGAACTTAAATAACAGGGTAGATCTCGATTTCGAAGAATTAGAGATAAATAATTAGTATAAAACTAATTACCTTTCTACTTTACTTTAATAAAAATCCGAAGGTATCAAGTTAAGAATTAATCTTACATCCAAGAAGATGTTTCCCATAAGGTTGCAAGATCAATTCATAGTTACCTCACAACACACAAATGTGTAAAAAGAAGAAACATCTCTCAAATAATATTCTCAAAAGTATCAAATCCACTCTTTTATATAGGGGAAAACTATTCAAAATAATATGAGATCTAAATACTAAAACCTAACTATAGAAAACTTTGATCTCGGAAAGCACGCAAAATGATGCCGAACTTCTTTCCTAACGAAATAAGGAAAAAGTTGCCGAACTTTTAAACATATGGACATGACTTCTCCATCCATTTTTGACAAGGATTTAAGCTCACTTTTGGGCAGAATTTTCAGCCCTATGTGGGCTTGGTTGTAATTTTTTGGGCTCATATGGACCCTATTCTTCCTCGTCTTGGGCTTGGACTTGGATCTAGATCATGGAATATGTGTAGCACTTGGCCCATTCTTCTTCGCAATTCTTGGACTCATTCTTGTGCTCTTCTTCCACAATAAACATCTTGATTTTCATTGAGGTTCGTCAATCTTTAATGGAAGTATGCCACCATGGATGCTATCAAATCCTCTTTGATGGTTGTGGCCATTGGCTTGGTCTTGAGAAATATATGTGAGGGCAGTAAGGAGTTATACTTGAACAACTGGCTAGCTTCAGAGAATGATTCTATTAACATTCCCATATACAAATACACTGCAAACCTTCATCGTCCTGCATGGATGTACATGATCTATTTTGCATTAGAATCATTTATGTGAGTAACCGTATTTTCAATCACCTCATGTTTATTGTAGATCAGGTTTCCTGCAGAATGCACAACAGCCAACTTATACTGAATATGATTTTGGATGTGAGGATACTCTAAAGCCTTAAAAATCAGCCGGAACTGCCAGTAAATGGTCTCTATAAATGTGTTCAAGTATTTTCCAAGGAAATTTGTGCGTCGTCGTTTCAGTCTTCTAATGGATAATTTTATCCATGCACCCAAGGGTGTGGCACAACAGTCAATCTGGGTGAAAACTATGGGGGCCAAAGTTCAAATTATGATATAGACAAAAAGAAAATGCTTCACTAGATAATTTATTCTCTTCTGAGTTCTGCCTAAGCCTTGGTGGACAATATTACTCAATAATTGTATATTTGGGAGGTAATTGGTGCATATTTATATAATCAGAACCCATGATTTTTGACACAGTATATATATATGTAAAAATCTACTAAAATATTAACATATATTAAACCTGAACCCATGACTTTATTAATAGTACAATGAGTTCAATGCAAGGTTGAACCTAGTAAGTGTAAATCTTGGATCGCCTCTAGAAATAGTCGAGCTGCAAAATCTGACCCAAATACTACTGTTATCAGTTATATAGTTAGAAAGAAGAGTAGTGCACATTCTGCTATCTTACATTAGGCATTAACAGATGCGTTTGTAAACATATCTTTAAGTGCACATTCAACTATCGTTTTTCCTTTTTTTTCCATGTCATCCTTTTCAATGAAGTTGAACCTATTGGAACATAAGGTGTTGATGGATCAGTTTTACTGCAGATGTAACAATTGCAGCTGCTGCAAAGGACGCTTTAGAGGGACACTGCATATATGATGGTGGCTATTGTAAGCTTCATCTATCATACTCTCGTCATACTGATCTGAATGTACAGGTATAGATATGTGCTTTTGAGTTGGTTTCGAAGGGAAAAAAGATGTCCCAATAAATAAAGAGTCGACACCATATTTTAAGATTCTATTACTGAAAGTATGCTTCTTGACACTTGTTGCTTCCTGCATCTTTTTCATTTGACCTCTTAGCTTGAATTAATTATTCAATTGTGTCTAATCAGGCATACAGTGATAAAAGTAGAGACTACACAGTTCCA-GAATCAA-GTTTGCTTGCGATGCAACAAGCATCTGCAGTCC</genome_strand>
        <mrna_strand>GGAAATGTTTTGCTGGTGACTATCGAGGGTGTTGAAGCTGGTGATGTCAGTATCGATGTCATTCATTTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTTTCAGCCTTTGGTTTTGTTCAAAAGATCGCTACTTTTGAGAAGGCTGCAGGTTTTCAG................................................................................................GCATTGATTCAATTTAGTGATGTTGGGACAGCATCTGCTGCTAGAGAGGCATTGGATGGGAGAAGTATACCAAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACCTTCTTCCAGAACATGTTAATCATTGTCACTTGCGCATCTCATATTCAGCACACACGGATCTTAATATCAAGTTTCAATCTCATCGAAGCAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGACTACACAAACCCTTATCTCCCAGTAAATCCTACTGCAATGGAGGGGGTTCTTCAG.......................................................................CCTGTTGTAGGTCCAGATGGAAAGAAAAAGGAACCCGAGAGTAATGTGCTTTTTGCCTCTTTAGAAAATATGCAGTATGCTGTTACCGTCGATGTCCTTAACACG............................................................................................GTTTTCTCTGCATTTGGTACTGTTCAGAAGATTGCTATATTTGAGGAAGAATGGTCAAACCCAGGCATTAATTCAGTATCCTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTAACAATTGCAGCTGCTGCAAAGGACGCTTTAGAGGGACACTGCATATATGATGGTGGCTATTGTAAGCTTCATCTATCATACTCTCGTCATACTGATCTGAATGTACAG....................................................................................................................................................................................GCATACAGTGACAAAAGTAGAGACTACACAGTTCCAGGAATCAAGGTTTGCTTGCGATGCAACAAGCATCTGCAGTCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E255667" ref_strand="+" ref_description="SGN-E255667 [cLEG-36-H16]">
      <seq>gggagatgttccaggaaatgttttgctggtgactatcgagggtgttgaagctggtgatgtcagtatcgatgtcattcatttggtattttcagcctttggttttgttcaaaagattgctacttttgaaaaggctgcaggttttcaggcattgattcaatttagtgatgttgggacagcatctgctgctagagaggcattggatgggagaagtataccaaagtacctgcttccagaacatgttaatcattgtcacttgcgcatctcatattcagcacacacggatcttaatatcaagtttcaatctcatcgaagcagggactacacaaacccttatctcccagtaaatcctactgcaatggagggggttcttcagcctgttgtaggtccagatggaaagaaaaaggaacccgagagtaatgtgctttttgcctctttagaaaatatgcagtatgctgttaccgttgatgtccttaacacggttttttctgcatttggtactgttcagaagatcgctatatttgagaagaatggtcaaacccaggcattagttcagtatcctgatgtaacaattgcagctgctgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="-" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="89704" stop="82678"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="89404" g_stop="89323" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="82" r_length="82" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="89322" i_stop="88622" i_length="701">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.927" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="88621" g_stop="88559" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="83" r_stop="145" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="88558" i_stop="88463" i_length="96">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="88462" g_stop="88389" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="146" r_stop="219" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="88388" i_stop="87115" i_length="1274">
            <donor d_prob="0.689" d_score="1.00"/>
            <acceptor a_prob="0.907" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="87114" g_stop="87019" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="220" r_stop="315" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="87018" i_stop="85640" i_length="1379">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="85639" g_stop="85582" g_length="58"/>
          <reference_exon_boundary r_type="cDNA" r_start="316" r_stop="373" r_length="58" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="85581" i_stop="85511" i_length="71">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.718" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="85510" g_stop="85406" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="374" r_stop="478" r_length="105" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="85405" i_stop="85314" i_length="92">
            <donor d_prob="0.975" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="85313" g_stop="85232" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="479" r_stop="560" r_length="82" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="85231" i_stop="83000" i_length="2232">
            <donor d_prob="0.963" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="82999" g_stop="82978" g_length="22"/>
          <reference_exon_boundary r_type="cDNA" r_start="561" r_stop="582" r_length="22" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="-" ref_id="SGN-E255667" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>582</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E255667" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="89404" e_stop="89323"/>
          <exon e_start="88621" e_stop="88559"/>
          <exon e_start="88462" e_stop="88389"/>
          <exon e_start="87114" e_stop="87019"/>
          <exon e_start="85639" e_stop="85582"/>
          <exon e_start="85510" e_stop="85406"/>
          <exon e_start="85313" e_stop="85232"/>
          <exon e_start="82999" e_stop="82978"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGGAGATGTTCCAGGAAATGTTTTGCTGGTGACTATCGAGGGTGTTGAAGCTGGTGATGTCAGTATCGATGTCATTCATTTGGTGAGTGTCTTGTTGCTTTCTCTCCTCTTTATGGAGAAAATATTTCCAAGTAAGCTAATTCAGGACTTATGGACTGTTCAGAAGTCGTGCCTTATCAAGAGTTAAGTATTCATCCAATAATCCTTAATAACATTTTGAACACAGCATGACTCCCGAAGAATTTTGTAGTTTGATACAAGTCCCCCTGAAAAAAGGAAAAAACACAACTAGTGGACTTCAATGAAGAATATTGTTATGTTGCTTTGTGTTAAAATATATTCTCTTATCTTTTCTTGTTTTAAAATATATTTTCTCTAGCATAGCAGTTTGTTCTTGGGACATTCTTCTAGTCTCTTGGAGCCTTTACTGCTTTCAGTAGCCTGAAACCCTAAGCTATGGTTCAGATTTTAGAAGAGCTAAATCTTACTTATTGTTTCACTTTCATCGCATATAACAACATTAGATGATGGTAGTGTTAACTAAAGTTGATTGAATCACAGATGGTCATTATTTAAGATCTTTTGTTGGAGACATTCTGGATATGTAATCATGTCGGTCATAAACCTTTCTATGGCTTGCATATACAGGTGTTACTCTGCACTCACAATTTAGTTCCTTTGTGTTTCTTCTTCAATGTGTTTTCGGAAACATAGTACACGTTGATAGTCCTTTATTACCTTCCTCTGTCTGATTTACTTTTAACGGGCCAAAACCCATTTCAGGTATTTTCAGCCTTTGGTTTTGTTCAAAAGATTGCTACTTTTGAAAAGGCTGCAGGTTTTCAGGTCCGTATGTCTGTGGACCAATGAGTTTTGGCTTTTTCTTAATTTTGGGTGGATGAAATGGCAGATTGCTAATGAGTTTCTCTTACATCTTGACAGGCATTGATTCAATTTAGTGATGTTGGGACAGCATCTGCTGCTAGAGAGGCATTGGATGGGAGAAGTATACCAAAGTATGGCTAGTCCTTTGTTTGAACATACCTTGGATTTATTCAACTTGCTTTCCACTTTACGTTTGATTAATTAGTGTACTTGCCCGCGCAAAGCGCGGTCATAGAATCTTATGACAGAAAGCATATGTGGAGAGCATTTCAGATTAAATATATGAAATAATTCAGTTAAACAGTATAGGTGAACGTGACTTAACAAAACATAATAAATAGAAGAATAACAGAAAAGAGAACAAATATCAAGTTAAGAATCTGGAGGATGTAACCCTAGAATGTTTTTGCCTTTCCTTCTTCTAAGGCATTGCTTGTATTTTTCTTTCAATATGAATTATGGACACTTATATTTTCATAAAGTTGATATTATTTTTGTTTTGCTCGCATGCCTTGTGTCTATAATCCAAGGAAATGGGTGATTTATGATGAGGTTACTCATCGTATTAGAGTATCGTAGATGAAATAAAGGCTTACATTCGGTCTCCTGTGTGATAAGAATGTGCTGCCAATGGTTTTCTCAAAAAAAAAAAAAAAAAGAAAAGAAAGTGCTACCAAGGATGTGACCTAGTGGTCAATGTAGTGGTTGAGAGCCATAAGGTCTCAGATTCGAATACCAGTAGAGACAAAAAATACTAGGTGATTCTTTACATCTATAGTTCATGGTGGACAGAGTTACCTTGTAACTATTGCTGGTAGGAGGTGATAGGTATCCCGTGGAATTTGTCGAGCACGAAAGCTGGCTTGGACACCACAGCCATAAAATAATAATAATAAGTGGAATGATTAAAAGAGAAACAGTGAAGACATATCATATAAAAAGAAACAACCCAACTTTAGGAATTTAGTTAAAAAGGCCAAGAAGTCCCTTTTTGTTAGCTGTCAGGAGTACTTTAAGGTTATTTTGAGTAAATTAAAAGTGGGTACCATGCTTACCTGCTATCTTCCTATATATAGAGAGATGCCTTTAAGCAATAATGGATTCTAGTAAAGAATTGTTTCATTTTTAAAATAAAACCTCTAACTAACTAGAAAGTAACTGAAAGAGTTAATGTTGTTAAATGCCTTTCTCTTTTAATTCAGCAATGAATGTACACGATTATAGATTTATTGAAATAGTGAATCTTATTTTTCAACAAATATTTTGAGGGTAAAATAAGAGAAGTCAAAAAATTGACAAAAAAGATAAAAACCAGTAGGCGAGGTGCCACATCACCTCCTTGTTACCTAGTTTTTTATACAGATAGAATTTTGGGATAGAATCCTAACTTTAATTTTTATCTCAGGTACCTGCTTCCAGAACATGTTAATCATTGTCACTTGCGCATCTCATATTCAGCACACACGGATCTTAATATCAAGTTTCAATCTCATCGAAGCAGGTAACACAGATTTACCTAGACAGCTTTTTGTATATATGACTTTGTTTCTTTATATTCTTATTGTTATTGCTATACTTGCTTGCATTTTTCTTTGCTAATTTTATCATTATCTGCTTTTGGTTTACAGTTGAGGTGTTCTCTAATTTTTTATGCTTCTTGTCATCTAGGGTTTAGTGAAGCTCGGCAGCTAAAACACAGATGTGTTTGTCATGGCCTCGTAGTAATTTTCTTTATCTCATAATAGTGGTTAACAGCGTTCTTCTCATTTCCCATTTAGATGACCATGTGAAGATCCTTGTTTTATACTGAGTTCATGGTTTGGAGAATGCTTGTCTATTTTTGTAAGAATCACTTACTGTGTATTCATTTCAAATACGTTAGTTGAGTATATTGCCTTTGGTAAAGAAATATGAATCGATGAATGTTGACTTTTATTTGTATCTGGCATCACTTATCGTGGGGATCTAGTTAGCAGACAAAAACACGGGATATAAGTTAGATGAGTATATTTGCCTTTGGTTAAGAACCTCTGTGATGTTTATTGTGTTCCTGGTGTCTCTTCCAGTGTCACATCTACTTACCGGTGCATTGGAAGGTATGCATGAAAACTGATGTGGAAAACTATTAGGTTGATATAGGGATAAGAGTGAGAGTTTATAGAATATATTTTTAGTGAATTCCTGATTTCTGTAAAATGTAATCTATTTGTCCATTTTACATGACATTCATTCCATTCTTTGATGGCTTAAAGGTTTGATGATATTCCTTTTTATATAACTCTCCCATCTTTCAAGAACTAGTATCATAAACTATTCAAATTTTAAACTTTGATGTGATATTATGTCTGTAAGTCTTAACTTTTCAACCACTAAATTAGTTTAGTTCACTATCATCAATATTATATAGAATTCAAATTAACATCTTAATTTTCTTTACAAGTCAAGCATCATCATATAACAAGGCATGGACGAGTTATTTAGTGCTGGAGCGAAACCAGTCCAATAGAGCTGATTGAATATAGATGATGCACCTACTAATTTGGAGTTGATGCATACTTGATTGATCGATTGATTTCGAGTTCTTCATCTGAATAGTCATATGAACTGAGCTTTTAGAGTGTGCTATGGGGTAGCATTTTGTTTTGTAGTTATTTTGTGGTATAGTTGCTGTGGTAATTCCATAATGGTGATCTTTGTTTAATAGCAGTGTTTTTGCACTTATCATTGCCTTCAAGATATATAATGTGTCTAATTCAACCTTTTGGGGAAATATGTATTTCAGAGTTTGCCAAATTTCAGGATTATATAATTTAGTCGATCTGATATTCTAGAAGCTTACATCAGTTTGATTCACATTTAATTCCTTCTTTTATTGTATAGGGACTACACAAACCCTTATCTCCCAGTAAATCCTACTGCAATGGAGGGGGTTCTTCAGGTATGTTCCTTTCCTCATTTTATTTGTTGTCATCCTTGTATAGGAGAAGTCCTCACAAGGTCTGTATTCAGCCTGTTGTAGGTCCAGATGGAAAGAAAAAGGAACCCGAGAGTAATGTGCTTTTTGCCTCTTTAGAAAATATGCAGTATGCTGTTACCGTTGATGTCCTTAACACGGTATTTTTTCTCTTGTTATTTCATTGATGCCCATTATGATAATTGTGTAGTTATTCAATTTTACTCTTCTGTTATATTCTGCCCGGAAACAGGTTTTTTCTGCATTTGGTACTGTTCAGAAGATCGCTATATTTGAGAAGAATGGTCAAACCCAGGCATTAGTTCAGTATCCTGGTATGTATGGATTATGAATGTTGTTCTTTGGTAGTTTAATCAACTACCTGTGTATACTTGGTCTAGCCTTTAAAGTTTATTGTGGCTTTTTTAATTTCTTCATCTCTTCTTTTACTCTTTCCTCACCCCAATAAGAATTGAGTTACTTGAAAGAAAACAAGAAAATAATGTGGAAATAAAAATATGAAGGATAGAGATTTGCAAAATTTGAGAATAAAATTCCTAAACTTCAAAATGAAGTGCTAAGAAGTAAGGACCCCGAGGCTCTCTTAACCCATGCTTATCGATGTCTTTTTTTGTTTTTTTATGAGGTATGCCTATCAATGTGTTTATAGGCCATGTATTGCTAATACTATGGTTTGCTATGTATTAGTCATATACCTTATAATATTGAATATGGTAAAAATCCTACCAAACATAGGATTAAATAATATCATGATTAAATACACTATACATGTGTTGAATTCTCTAATACAAAATTCCGAATCACCCCTAGTTGGTCTTAATATTCAAAAAATAGCTGATTAAAGTTAATTCTTATACCAATATAGTCAATTCAAGAACTTAAATAACAGGGTAGATCTCGATTTCGAAGAATTAGAGATAAATAATTAGTATAAAACTAATTACCTTTCTACTTTACTTTAATAAAAATCCGAAGGTATCAAGTTAAGAATTAATCTTACATCCAAGAAGATGTTTCCCATAAGGTTGCAAGATCAATTCATAGTTACCTCACAACACACAAATGTGTAAAAAGAAGAAACATCTCTCAAATAATATTCTCAAAAGTATCAAATCCACTCTTTTATATAGGGGAAAACTATTCAAAATAATATGAGATCTAAATACTAAAACCTAACTATAGAAAACTTTGATCTCGGAAAGCACGCAAAATGATGCCGAACTTCTTTCCTAACGAAATAAGGAAAAAGTTGCCGAACTTTTAAACATATGGACATGACTTCTCCATCCATTTTTGACAAGGATTTAAGCTCACTTTTGGGCAGAATTTTCAGCCCTATGTGGGCTTGGTTGTAATTTTTTGGGCTCATATGGACCCTATTCTTCCTCGTCTTGGGCTTGGACTTGGATCTAGATCATGGAATATGTGTAGCACTTGGCCCATTCTTCTTCGCAATTCTTGGACTCATTCTTGTGCTCTTCTTCCACAATAAACATCTTGATTTTCATTGAGGTTCGTCAATCTTTAATGGAAGTATGCCACCATGGATGCTATCAAATCCTCTTTGATGGTTGTGGCCATTGGCTTGGTCTTGAGAAATATATGTGAGGGCAGTAAGGAGTTATACTTGAACAACTGGCTAGCTTCAGAGAATGATTCTATTAACATTCCCATATACAAATACACTGCAAACCTTCATCGTCCTGCATGGATGTACATGATCTATTTTGCATTAGAATCATTTATGTGAGTAACCGTATTTTCAATCACCTCATGTTTATTGTAGATCAGGTTTCCTGCAGAATGCACAACAGCCAACTTATACTGAATATGATTTTGGATGTGAGGATACTCTAAAGCCTTAAAAATCAGCCGGAACTGCCAGTAAATGGTCTCTATAAATGTGTTCAAGTATTTTCCAAGGAAATTTGTGCGTCGTCGTTTCAGTCTTCTAATGGATAATTTTATCCATGCACCCAAGGGTGTGGCACAACAGTCAATCTGGGTGAAAACTATGGGGGCCAAAGTTCAAATTATGATATAGACAAAAAGAAAATGCTTCACTAGATAATTTATTCTCTTCTGAGTTCTGCCTAAGCCTTGGTGGACAATATTACTCAATAATTGTATATTTGGGAGGTAATTGGTGCATATTTATATAATCAGAACCCATGATTTTTGACACAGTATATATATATGTAAAAATCTACTAAAATATTAACATATATTAAACCTGAACCCATGACTTTATTAATAGTACAATGAGTTCAATGCAAGGTTGAACCTAGTAAGTGTAAATCTTGGATCGCCTCTAGAAATAGTCGAGCTGCAAAATCTGACCCAAATACTACTGTTATCAGTTATATAGTTAGAAAGAAGAGTAGTGCACATTCTGCTATCTTACATTAGGCATTAACAGATGCGTTTGTAAACATATCTTTAAGTGCACATTCAACTATCGTTTTTCCTTTTTTTTCCATGTCATCCTTTTCAATGAAGTTGAACCTATTGGAACATAAGGTGTTGATGGATCAGTTTTACTGCAGATGTAACAATTGCAGCTGCTGC</genome_strand>
        <mrna_strand>GGGAGATGTTCCAGGAAATGTTTTGCTGGTGACTATCGAGGGTGTTGAAGCTGGTGATGTCAGTATCGATGTCATTCATTTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTTTCAGCCTTTGGTTTTGTTCAAAAGATTGCTACTTTTGAAAAGGCTGCAGGTTTTCAG................................................................................................GCATTGATTCAATTTAGTGATGTTGGGACAGCATCTGCTGCTAGAGAGGCATTGGATGGGAGAAGTATACCAAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACCTGCTTCCAGAACATGTTAATCATTGTCACTTGCGCATCTCATATTCAGCACACACGGATCTTAATATCAAGTTTCAATCTCATCGAAGCAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGACTACACAAACCCTTATCTCCCAGTAAATCCTACTGCAATGGAGGGGGTTCTTCAG.......................................................................CCTGTTGTAGGTCCAGATGGAAAGAAAAAGGAACCCGAGAGTAATGTGCTTTTTGCCTCTTTAGAAAATATGCAGTATGCTGTTACCGTTGATGTCCTTAACACG............................................................................................GTTTTTTCTGCATTTGGTACTGTTCAGAAGATCGCTATATTTGAGAAGAATGGTCAAACCCAGGCATTAGTTCAGTATCCTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTAACAATTGCAGCTGCTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E260218" ref_strand="+" ref_description="SGN-E260218 [cLEG-53-M3]">
      <seq>gggagatgttccaggaaatgttttgctggtgactatcgagggtgttgaagctggtgatgtcagtatcgatgtcattcatttggtattttcagcctttggttttgttcaaaagattgctacttttgaaaaggctgcaggttttcaggcattgattcaatttagtgatgttgggacagcatctgctgctagagaggcattggatgggagaagtataccaaagtacctgcttccagaacatgttaatcattgtcacttgcgcatctcatattcagcacacacggatcttaatatcaagtttcaatctcatcgaagcagggactacacaaacccttatctcccagtaaatcctactgcaatggagggggttcttcagcctgttgtaggtccagatggaaagaaaaaggaacccgagagtaatgtgctttttgcctctttagaaaatatgcagtatgctgttaccgttgatgtccttaacacggttttttctgcatttggtactgttcagaagatcgctatatttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="-" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="89704" stop="84971"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="89404" g_stop="89323" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="82" r_length="82" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="89322" i_stop="88622" i_length="701">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.927" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="88621" g_stop="88559" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="83" r_stop="145" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="88558" i_stop="88463" i_length="96">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="88462" g_stop="88389" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="146" r_stop="219" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="88388" i_stop="87115" i_length="1274">
            <donor d_prob="0.689" d_score="1.00"/>
            <acceptor a_prob="0.907" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="87114" g_stop="87019" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="220" r_stop="315" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="87018" i_stop="85640" i_length="1379">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="85639" g_stop="85582" g_length="58"/>
          <reference_exon_boundary r_type="cDNA" r_start="316" r_stop="373" r_length="58" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="85581" i_stop="85511" i_length="71">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.718" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="85510" g_stop="85406" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="374" r_stop="478" r_length="105" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="85405" i_stop="85314" i_length="92">
            <donor d_prob="0.975" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="85313" g_stop="85271" g_length="43"/>
          <reference_exon_boundary r_type="cDNA" r_start="479" r_stop="521" r_length="43" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="-" ref_id="SGN-E260218" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>521</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E260218" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="89404" e_stop="89323"/>
          <exon e_start="88621" e_stop="88559"/>
          <exon e_start="88462" e_stop="88389"/>
          <exon e_start="87114" e_stop="87019"/>
          <exon e_start="85639" e_stop="85582"/>
          <exon e_start="85510" e_stop="85406"/>
          <exon e_start="85313" e_stop="85271"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGGAGATGTTCCAGGAAATGTTTTGCTGGTGACTATCGAGGGTGTTGAAGCTGGTGATGTCAGTATCGATGTCATTCATTTGGTGAGTGTCTTGTTGCTTTCTCTCCTCTTTATGGAGAAAATATTTCCAAGTAAGCTAATTCAGGACTTATGGACTGTTCAGAAGTCGTGCCTTATCAAGAGTTAAGTATTCATCCAATAATCCTTAATAACATTTTGAACACAGCATGACTCCCGAAGAATTTTGTAGTTTGATACAAGTCCCCCTGAAAAAAGGAAAAAACACAACTAGTGGACTTCAATGAAGAATATTGTTATGTTGCTTTGTGTTAAAATATATTCTCTTATCTTTTCTTGTTTTAAAATATATTTTCTCTAGCATAGCAGTTTGTTCTTGGGACATTCTTCTAGTCTCTTGGAGCCTTTACTGCTTTCAGTAGCCTGAAACCCTAAGCTATGGTTCAGATTTTAGAAGAGCTAAATCTTACTTATTGTTTCACTTTCATCGCATATAACAACATTAGATGATGGTAGTGTTAACTAAAGTTGATTGAATCACAGATGGTCATTATTTAAGATCTTTTGTTGGAGACATTCTGGATATGTAATCATGTCGGTCATAAACCTTTCTATGGCTTGCATATACAGGTGTTACTCTGCACTCACAATTTAGTTCCTTTGTGTTTCTTCTTCAATGTGTTTTCGGAAACATAGTACACGTTGATAGTCCTTTATTACCTTCCTCTGTCTGATTTACTTTTAACGGGCCAAAACCCATTTCAGGTATTTTCAGCCTTTGGTTTTGTTCAAAAGATTGCTACTTTTGAAAAGGCTGCAGGTTTTCAGGTCCGTATGTCTGTGGACCAATGAGTTTTGGCTTTTTCTTAATTTTGGGTGGATGAAATGGCAGATTGCTAATGAGTTTCTCTTACATCTTGACAGGCATTGATTCAATTTAGTGATGTTGGGACAGCATCTGCTGCTAGAGAGGCATTGGATGGGAGAAGTATACCAAAGTATGGCTAGTCCTTTGTTTGAACATACCTTGGATTTATTCAACTTGCTTTCCACTTTACGTTTGATTAATTAGTGTACTTGCCCGCGCAAAGCGCGGTCATAGAATCTTATGACAGAAAGCATATGTGGAGAGCATTTCAGATTAAATATATGAAATAATTCAGTTAAACAGTATAGGTGAACGTGACTTAACAAAACATAATAAATAGAAGAATAACAGAAAAGAGAACAAATATCAAGTTAAGAATCTGGAGGATGTAACCCTAGAATGTTTTTGCCTTTCCTTCTTCTAAGGCATTGCTTGTATTTTTCTTTCAATATGAATTATGGACACTTATATTTTCATAAAGTTGATATTATTTTTGTTTTGCTCGCATGCCTTGTGTCTATAATCCAAGGAAATGGGTGATTTATGATGAGGTTACTCATCGTATTAGAGTATCGTAGATGAAATAAAGGCTTACATTCGGTCTCCTGTGTGATAAGAATGTGCTGCCAATGGTTTTCTCAAAAAAAAAAAAAAAAAGAAAAGAAAGTGCTACCAAGGATGTGACCTAGTGGTCAATGTAGTGGTTGAGAGCCATAAGGTCTCAGATTCGAATACCAGTAGAGACAAAAAATACTAGGTGATTCTTTACATCTATAGTTCATGGTGGACAGAGTTACCTTGTAACTATTGCTGGTAGGAGGTGATAGGTATCCCGTGGAATTTGTCGAGCACGAAAGCTGGCTTGGACACCACAGCCATAAAATAATAATAATAAGTGGAATGATTAAAAGAGAAACAGTGAAGACATATCATATAAAAAGAAACAACCCAACTTTAGGAATTTAGTTAAAAAGGCCAAGAAGTCCCTTTTTGTTAGCTGTCAGGAGTACTTTAAGGTTATTTTGAGTAAATTAAAAGTGGGTACCATGCTTACCTGCTATCTTCCTATATATAGAGAGATGCCTTTAAGCAATAATGGATTCTAGTAAAGAATTGTTTCATTTTTAAAATAAAACCTCTAACTAACTAGAAAGTAACTGAAAGAGTTAATGTTGTTAAATGCCTTTCTCTTTTAATTCAGCAATGAATGTACACGATTATAGATTTATTGAAATAGTGAATCTTATTTTTCAACAAATATTTTGAGGGTAAAATAAGAGAAGTCAAAAAATTGACAAAAAAGATAAAAACCAGTAGGCGAGGTGCCACATCACCTCCTTGTTACCTAGTTTTTTATACAGATAGAATTTTGGGATAGAATCCTAACTTTAATTTTTATCTCAGGTACCTGCTTCCAGAACATGTTAATCATTGTCACTTGCGCATCTCATATTCAGCACACACGGATCTTAATATCAAGTTTCAATCTCATCGAAGCAGGTAACACAGATTTACCTAGACAGCTTTTTGTATATATGACTTTGTTTCTTTATATTCTTATTGTTATTGCTATACTTGCTTGCATTTTTCTTTGCTAATTTTATCATTATCTGCTTTTGGTTTACAGTTGAGGTGTTCTCTAATTTTTTATGCTTCTTGTCATCTAGGGTTTAGTGAAGCTCGGCAGCTAAAACACAGATGTGTTTGTCATGGCCTCGTAGTAATTTTCTTTATCTCATAATAGTGGTTAACAGCGTTCTTCTCATTTCCCATTTAGATGACCATGTGAAGATCCTTGTTTTATACTGAGTTCATGGTTTGGAGAATGCTTGTCTATTTTTGTAAGAATCACTTACTGTGTATTCATTTCAAATACGTTAGTTGAGTATATTGCCTTTGGTAAAGAAATATGAATCGATGAATGTTGACTTTTATTTGTATCTGGCATCACTTATCGTGGGGATCTAGTTAGCAGACAAAAACACGGGATATAAGTTAGATGAGTATATTTGCCTTTGGTTAAGAACCTCTGTGATGTTTATTGTGTTCCTGGTGTCTCTTCCAGTGTCACATCTACTTACCGGTGCATTGGAAGGTATGCATGAAAACTGATGTGGAAAACTATTAGGTTGATATAGGGATAAGAGTGAGAGTTTATAGAATATATTTTTAGTGAATTCCTGATTTCTGTAAAATGTAATCTATTTGTCCATTTTACATGACATTCATTCCATTCTTTGATGGCTTAAAGGTTTGATGATATTCCTTTTTATATAACTCTCCCATCTTTCAAGAACTAGTATCATAAACTATTCAAATTTTAAACTTTGATGTGATATTATGTCTGTAAGTCTTAACTTTTCAACCACTAAATTAGTTTAGTTCACTATCATCAATATTATATAGAATTCAAATTAACATCTTAATTTTCTTTACAAGTCAAGCATCATCATATAACAAGGCATGGACGAGTTATTTAGTGCTGGAGCGAAACCAGTCCAATAGAGCTGATTGAATATAGATGATGCACCTACTAATTTGGAGTTGATGCATACTTGATTGATCGATTGATTTCGAGTTCTTCATCTGAATAGTCATATGAACTGAGCTTTTAGAGTGTGCTATGGGGTAGCATTTTGTTTTGTAGTTATTTTGTGGTATAGTTGCTGTGGTAATTCCATAATGGTGATCTTTGTTTAATAGCAGTGTTTTTGCACTTATCATTGCCTTCAAGATATATAATGTGTCTAATTCAACCTTTTGGGGAAATATGTATTTCAGAGTTTGCCAAATTTCAGGATTATATAATTTAGTCGATCTGATATTCTAGAAGCTTACATCAGTTTGATTCACATTTAATTCCTTCTTTTATTGTATAGGGACTACACAAACCCTTATCTCCCAGTAAATCCTACTGCAATGGAGGGGGTTCTTCAGGTATGTTCCTTTCCTCATTTTATTTGTTGTCATCCTTGTATAGGAGAAGTCCTCACAAGGTCTGTATTCAGCCTGTTGTAGGTCCAGATGGAAAGAAAAAGGAACCCGAGAGTAATGTGCTTTTTGCCTCTTTAGAAAATATGCAGTATGCTGTTACCGTTGATGTCCTTAACACGGTATTTTTTCTCTTGTTATTTCATTGATGCCCATTATGATAATTGTGTAGTTATTCAATTTTACTCTTCTGTTATATTCTGCCCGGAAACAGGTTTTTTCTGCATTTGGTACTGTTCAGAAGATCGCTATATTTG</genome_strand>
        <mrna_strand>GGGAGATGTTCCAGGAAATGTTTTGCTGGTGACTATCGAGGGTGTTGAAGCTGGTGATGTCAGTATCGATGTCATTCATTTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTTTCAGCCTTTGGTTTTGTTCAAAAGATTGCTACTTTTGAAAAGGCTGCAGGTTTTCAG................................................................................................GCATTGATTCAATTTAGTGATGTTGGGACAGCATCTGCTGCTAGAGAGGCATTGGATGGGAGAAGTATACCAAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACCTGCTTCCAGAACATGTTAATCATTGTCACTTGCGCATCTCATATTCAGCACACACGGATCTTAATATCAAGTTTCAATCTCATCGAAGCAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGACTACACAAACCCTTATCTCCCAGTAAATCCTACTGCAATGGAGGGGGTTCTTCAG.......................................................................CCTGTTGTAGGTCCAGATGGAAAGAAAAAGGAACCCGAGAGTAATGTGCTTTTTGCCTCTTTAGAAAATATGCAGTATGCTGTTACCGTTGATGTCCTTAACACG............................................................................................GTTTTTTCTGCATTTGGTACTGTTCAGAAGATCGCTATATTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E268745" ref_strand="+" ref_description="SGN-E268745 [cLEM-16-L16]">
      <seq>gaatttgctgaccttaatcaggcaatcaatatggtttcatattatgcttcatcttcagagcctgctcaagttcgtggcaagacggtgtacattcaatattctaataggaatgaaattgtcaataataagagtccgggagatgttccaggaaatgttttgctggtgactatcgagggtgttgaagctggtgatgtcagtatcgatgtcattcatttggtattttcagcctttggttttgttcaaaagattgctacttttgaaaaggctgcaggttttcaggcattgattcaatttagtgatgttgggacagcatctgctgctagagaggcattggatgggagaagtataccaaagtacctgcttccagaacatgttaatcattgtcacttgcgcatctcatattcagcacacacggatcttaatatcaagtttcaatctcatcgaagcagggactacacaaacccttatctcccagtaaatcctactgcaatggagggggttcttcagcctgttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="-" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="89832" stop="85282"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="89532" g_stop="89323" g_length="210"/>
          <reference_exon_boundary r_type="cDNA" r_start="7" r_stop="216" r_length="210" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="89322" i_stop="88622" i_length="701">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.927" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="88621" g_stop="88559" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="217" r_stop="279" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="88558" i_stop="88463" i_length="96">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="88462" g_stop="88389" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="280" r_stop="353" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="88388" i_stop="87115" i_length="1274">
            <donor d_prob="0.689" d_score="1.00"/>
            <acceptor a_prob="0.907" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="87114" g_stop="87019" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="354" r_stop="449" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="87018" i_stop="85640" i_length="1379">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="85639" g_stop="85582" g_length="58"/>
          <reference_exon_boundary r_type="cDNA" r_start="450" r_stop="507" r_length="58" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="85581" i_stop="85511" i_length="71">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.718" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="85510" g_stop="85504" g_length="7"/>
          <reference_exon_boundary r_type="cDNA" r_start="508" r_stop="514" r_length="7" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="-" ref_id="SGN-E268745" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>508</cumulative_length_of_scored_exons>
        <coverage percentage="0.988" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E268745" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="89532" e_stop="89323"/>
          <exon e_start="88621" e_stop="88559"/>
          <exon e_start="88462" e_stop="88389"/>
          <exon e_start="87114" e_stop="87019"/>
          <exon e_start="85639" e_stop="85582"/>
          <exon e_start="85510" e_stop="85504"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTGACCTTAATCAGGCAATCAATATGGTTTCATATTATGCTTCATCTTCAGAGCCTGCTCAAGTTCGTGGCAAGACGGTGTACATTCAATATTCTAATAGGAATGAAATTGTCAATAATAAGAGTCCGGGAGATGTTCCAGGAAATGTTTTGCTGGTGACTATCGAGGGTGTTGAAGCTGGTGATGTCAGTATCGATGTCATTCATTTGGTGAGTGTCTTGTTGCTTTCTCTCCTCTTTATGGAGAAAATATTTCCAAGTAAGCTAATTCAGGACTTATGGACTGTTCAGAAGTCGTGCCTTATCAAGAGTTAAGTATTCATCCAATAATCCTTAATAACATTTTGAACACAGCATGACTCCCGAAGAATTTTGTAGTTTGATACAAGTCCCCCTGAAAAAAGGAAAAAACACAACTAGTGGACTTCAATGAAGAATATTGTTATGTTGCTTTGTGTTAAAATATATTCTCTTATCTTTTCTTGTTTTAAAATATATTTTCTCTAGCATAGCAGTTTGTTCTTGGGACATTCTTCTAGTCTCTTGGAGCCTTTACTGCTTTCAGTAGCCTGAAACCCTAAGCTATGGTTCAGATTTTAGAAGAGCTAAATCTTACTTATTGTTTCACTTTCATCGCATATAACAACATTAGATGATGGTAGTGTTAACTAAAGTTGATTGAATCACAGATGGTCATTATTTAAGATCTTTTGTTGGAGACATTCTGGATATGTAATCATGTCGGTCATAAACCTTTCTATGGCTTGCATATACAGGTGTTACTCTGCACTCACAATTTAGTTCCTTTGTGTTTCTTCTTCAATGTGTTTTCGGAAACATAGTACACGTTGATAGTCCTTTATTACCTTCCTCTGTCTGATTTACTTTTAACGGGCCAAAACCCATTTCAGGTATTTTCAGCCTTTGGTTTTGTTCAAAAGATTGCTACTTTTGAAAAGGCTGCAGGTTTTCAGGTCCGTATGTCTGTGGACCAATGAGTTTTGGCTTTTTCTTAATTTTGGGTGGATGAAATGGCAGATTGCTAATGAGTTTCTCTTACATCTTGACAGGCATTGATTCAATTTAGTGATGTTGGGACAGCATCTGCTGCTAGAGAGGCATTGGATGGGAGAAGTATACCAAAGTATGGCTAGTCCTTTGTTTGAACATACCTTGGATTTATTCAACTTGCTTTCCACTTTACGTTTGATTAATTAGTGTACTTGCCCGCGCAAAGCGCGGTCATAGAATCTTATGACAGAAAGCATATGTGGAGAGCATTTCAGATTAAATATATGAAATAATTCAGTTAAACAGTATAGGTGAACGTGACTTAACAAAACATAATAAATAGAAGAATAACAGAAAAGAGAACAAATATCAAGTTAAGAATCTGGAGGATGTAACCCTAGAATGTTTTTGCCTTTCCTTCTTCTAAGGCATTGCTTGTATTTTTCTTTCAATATGAATTATGGACACTTATATTTTCATAAAGTTGATATTATTTTTGTTTTGCTCGCATGCCTTGTGTCTATAATCCAAGGAAATGGGTGATTTATGATGAGGTTACTCATCGTATTAGAGTATCGTAGATGAAATAAAGGCTTACATTCGGTCTCCTGTGTGATAAGAATGTGCTGCCAATGGTTTTCTCAAAAAAAAAAAAAAAAAGAAAAGAAAGTGCTACCAAGGATGTGACCTAGTGGTCAATGTAGTGGTTGAGAGCCATAAGGTCTCAGATTCGAATACCAGTAGAGACAAAAAATACTAGGTGATTCTTTACATCTATAGTTCATGGTGGACAGAGTTACCTTGTAACTATTGCTGGTAGGAGGTGATAGGTATCCCGTGGAATTTGTCGAGCACGAAAGCTGGCTTGGACACCACAGCCATAAAATAATAATAATAAGTGGAATGATTAAAAGAGAAACAGTGAAGACATATCATATAAAAAGAAACAACCCAACTTTAGGAATTTAGTTAAAAAGGCCAAGAAGTCCCTTTTTGTTAGCTGTCAGGAGTACTTTAAGGTTATTTTGAGTAAATTAAAAGTGGGTACCATGCTTACCTGCTATCTTCCTATATATAGAGAGATGCCTTTAAGCAATAATGGATTCTAGTAAAGAATTGTTTCATTTTTAAAATAAAACCTCTAACTAACTAGAAAGTAACTGAAAGAGTTAATGTTGTTAAATGCCTTTCTCTTTTAATTCAGCAATGAATGTACACGATTATAGATTTATTGAAATAGTGAATCTTATTTTTCAACAAATATTTTGAGGGTAAAATAAGAGAAGTCAAAAAATTGACAAAAAAGATAAAAACCAGTAGGCGAGGTGCCACATCACCTCCTTGTTACCTAGTTTTTTATACAGATAGAATTTTGGGATAGAATCCTAACTTTAATTTTTATCTCAGGTACCTGCTTCCAGAACATGTTAATCATTGTCACTTGCGCATCTCATATTCAGCACACACGGATCTTAATATCAAGTTTCAATCTCATCGAAGCAGGTAACACAGATTTACCTAGACAGCTTTTTGTATATATGACTTTGTTTCTTTATATTCTTATTGTTATTGCTATACTTGCTTGCATTTTTCTTTGCTAATTTTATCATTATCTGCTTTTGGTTTACAGTTGAGGTGTTCTCTAATTTTTTATGCTTCTTGTCATCTAGGGTTTAGTGAAGCTCGGCAGCTAAAACACAGATGTGTTTGTCATGGCCTCGTAGTAATTTTCTTTATCTCATAATAGTGGTTAACAGCGTTCTTCTCATTTCCCATTTAGATGACCATGTGAAGATCCTTGTTTTATACTGAGTTCATGGTTTGGAGAATGCTTGTCTATTTTTGTAAGAATCACTTACTGTGTATTCATTTCAAATACGTTAGTTGAGTATATTGCCTTTGGTAAAGAAATATGAATCGATGAATGTTGACTTTTATTTGTATCTGGCATCACTTATCGTGGGGATCTAGTTAGCAGACAAAAACACGGGATATAAGTTAGATGAGTATATTTGCCTTTGGTTAAGAACCTCTGTGATGTTTATTGTGTTCCTGGTGTCTCTTCCAGTGTCACATCTACTTACCGGTGCATTGGAAGGTATGCATGAAAACTGATGTGGAAAACTATTAGGTTGATATAGGGATAAGAGTGAGAGTTTATAGAATATATTTTTAGTGAATTCCTGATTTCTGTAAAATGTAATCTATTTGTCCATTTTACATGACATTCATTCCATTCTTTGATGGCTTAAAGGTTTGATGATATTCCTTTTTATATAACTCTCCCATCTTTCAAGAACTAGTATCATAAACTATTCAAATTTTAAACTTTGATGTGATATTATGTCTGTAAGTCTTAACTTTTCAACCACTAAATTAGTTTAGTTCACTATCATCAATATTATATAGAATTCAAATTAACATCTTAATTTTCTTTACAAGTCAAGCATCATCATATAACAAGGCATGGACGAGTTATTTAGTGCTGGAGCGAAACCAGTCCAATAGAGCTGATTGAATATAGATGATGCACCTACTAATTTGGAGTTGATGCATACTTGATTGATCGATTGATTTCGAGTTCTTCATCTGAATAGTCATATGAACTGAGCTTTTAGAGTGTGCTATGGGGTAGCATTTTGTTTTGTAGTTATTTTGTGGTATAGTTGCTGTGGTAATTCCATAATGGTGATCTTTGTTTAATAGCAGTGTTTTTGCACTTATCATTGCCTTCAAGATATATAATGTGTCTAATTCAACCTTTTGGGGAAATATGTATTTCAGAGTTTGCCAAATTTCAGGATTATATAATTTAGTCGATCTGATATTCTAGAAGCTTACATCAGTTTGATTCACATTTAATTCCTTCTTTTATTGTATAGGGACTACACAAACCCTTATCTCCCAGTAAATCCTACTGCAATGGAGGGGGTTCTTCAGGTATGTTCCTTTCCTCATTTTATTTGTTGTCATCCTTGTATAGGAGAAGTCCTCACAAGGTCTGTATTCAGCCTGTTG</genome_strand>
        <mrna_strand>GCTGACCTTAATCAGGCAATCAATATGGTTTCATATTATGCTTCATCTTCAGAGCCTGCTCAAGTTCGTGGCAAGACGGTGTACATTCAATATTCTAATAGGAATGAAATTGTCAATAATAAGAGTCCGGGAGATGTTCCAGGAAATGTTTTGCTGGTGACTATCGAGGGTGTTGAAGCTGGTGATGTCAGTATCGATGTCATTCATTTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTTTCAGCCTTTGGTTTTGTTCAAAAGATTGCTACTTTTGAAAAGGCTGCAGGTTTTCAG................................................................................................GCATTGATTCAATTTAGTGATGTTGGGACAGCATCTGCTGCTAGAGAGGCATTGGATGGGAGAAGTATACCAAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACCTGCTTCCAGAACATGTTAATCATTGTCACTTGCGCATCTCATATTCAGCACACACGGATCTTAATATCAAGTTTCAATCTCATCGAAGCAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGACTACACAAACCCTTATCTCCCAGTAAATCCTACTGCAATGGAGGGGGTTCTTCAG.......................................................................CCTGTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E272915" ref_strand="+" ref_description="SGN-E272915 [cLEM-25-P21]">
      <seq>tcgcaaccaagcgtttgtcgaatttgctgaccttaatcaggcaatcaatatggtttcatattatgcttcatcttcagagcctgctcaagttcgtggcaagacggtgtacattcaatattctaataggaatgaaattgtcaataataagagtccgggagatgttccaggaaatgttttgctggtgactatcgagggtgttgaagctggtgatgtcagtatcgatgtcattcatttgatggtcattatttaagatcttttgttggagacattctggatatgtaatcatgtcggtcataaacctttctatggcttgcatatacaggtattttcagcctttggttttgttcaaaagattgctacttttgaaaaggctgcaggttttcaggcattgattcaatttagtgatgttgggacagcatctgctgctagagaggcattggatgggagaagtataccaaagtacctgcttccagaacatgttaatcattgtcacttgcgcatctcatattcagcacacacggatcttaatatcaagtttcaatctcatcgaagcagggactacacaaaccctta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="-" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="90448" stop="85322"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90148" g_stop="90124" g_length="25"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="25" r_length="25" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="90123" i_stop="89533" i_length="591">
            <donor d_prob="0.971" d_score="0.00"/>
            <acceptor a_prob="0.959" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="89532" g_stop="89323" g_length="210"/>
          <reference_exon_boundary r_type="cDNA" r_start="26" r_stop="235" r_length="210" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="89322" i_stop="88844" i_length="479">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="88843" g_stop="88757" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="236" r_stop="322" r_length="87" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="88756" i_stop="88622" i_length="135">
            <donor d_prob="0.953" d_score="1.00"/>
            <acceptor a_prob="0.927" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="88621" g_stop="88559" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="323" r_stop="385" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="88558" i_stop="88463" i_length="96">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="88462" g_stop="88389" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="386" r_stop="459" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="88388" i_stop="87115" i_length="1274">
            <donor d_prob="0.689" d_score="1.00"/>
            <acceptor a_prob="0.907" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="87114" g_stop="87019" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="460" r_stop="555" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="87018" i_stop="85640" i_length="1379">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="85639" g_stop="85622" g_length="18"/>
          <reference_exon_boundary r_type="cDNA" r_start="556" r_stop="573" r_length="18" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="-" ref_id="SGN-E272915" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>573</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E272915" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90148" e_stop="90124"/>
          <exon e_start="89532" e_stop="89323"/>
          <exon e_start="88843" e_stop="88757"/>
          <exon e_start="88621" e_stop="88559"/>
          <exon e_start="88462" e_stop="88389"/>
          <exon e_start="87114" e_stop="87019"/>
          <exon e_start="85639" e_stop="85622"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGCAACCAAGCGTTTGTCGAATTTGTAAGTTGTTTTTTATTTGATTATCACAATTGATTGTCTTAAGAGTGGGAACGATGGACTTCCGTTTTTAGATTTCTTGGTTGCGGCTAAATGTGTGTAGCTAGAGTTCAGTTACTAAATGTGTCTACTGTTCAAGCTCTTTCAGTTCTTATTGTTCGTTTCATGGCAGATATGCTCCATGGGTAACTCATTTTGAATGATTAGGAGATGACTGGGTTCTTGAAGTTAGGATATATCAGTTCAAACCCCAAAACACTGTGTGTAAGTAGACAATCCTATAGCCAGACAAATTCCTCGGAGTTTGTACTTGTAGGAATGCCCTGCCCCAGCCAGCAAATTAGTTGAGGTGTGTTCAAACTGGTTCTGGAATGGTTTGGATCTGTCATAATAAATTTGTAAATTAGAGTATTAGGAGCTTCCATAATGAATTTGTGAACTGTAATTGTAATTGTAGAATAATTAACTGCTTGAAATAGTTCAGTTACACTCGTGGGTTTCATTCTAAAGCAATTCTTTTGTATATACGCCTTTGCCTTATGAGTGCGTTAACATGCATTATTACCCTCTAATCTGCATATTTGTCAACTGCAGGCTGACCTTAATCAGGCAATCAATATGGTTTCATATTATGCTTCATCTTCAGAGCCTGCTCAAGTTCGTGGCAAGACGGTGTACATTCAATATTCTAATAGGAATGAAATTGTCAATAATAAGAGTCCGGGAGATGTTCCAGGAAATGTTTTGCTGGTGACTATCGAGGGTGTTGAAGCTGGTGATGTCAGTATCGATGTCATTCATTTGGTGAGTGTCTTGTTGCTTTCTCTCCTCTTTATGGAGAAAATATTTCCAAGTAAGCTAATTCAGGACTTATGGACTGTTCAGAAGTCGTGCCTTATCAAGAGTTAAGTATTCATCCAATAATCCTTAATAACATTTTGAACACAGCATGACTCCCGAAGAATTTTGTAGTTTGATACAAGTCCCCCTGAAAAAAGGAAAAAACACAACTAGTGGACTTCAATGAAGAATATTGTTATGTTGCTTTGTGTTAAAATATATTCTCTTATCTTTTCTTGTTTTAAAATATATTTTCTCTAGCATAGCAGTTTGTTCTTGGGACATTCTTCTAGTCTCTTGGAGCCTTTACTGCTTTCAGTAGCCTGAAACCCTAAGCTATGGTTCAGATTTTAGAAGAGCTAAATCTTACTTATTGTTTCACTTTCATCGCATATAACAACATTAGATGATGGTAGTGTTAACTAAAGTTGATTGAATCACAGATGGTCATTATTTAAGATCTTTTGTTGGAGACATTCTGGATATGTAATCATGTCGGTCATAAACCTTTCTATGGCTTGCATATACAGGTGTTACTCTGCACTCACAATTTAGTTCCTTTGTGTTTCTTCTTCAATGTGTTTTCGGAAACATAGTACACGTTGATAGTCCTTTATTACCTTCCTCTGTCTGATTTACTTTTAACGGGCCAAAACCCATTTCAGGTATTTTCAGCCTTTGGTTTTGTTCAAAAGATTGCTACTTTTGAAAAGGCTGCAGGTTTTCAGGTCCGTATGTCTGTGGACCAATGAGTTTTGGCTTTTTCTTAATTTTGGGTGGATGAAATGGCAGATTGCTAATGAGTTTCTCTTACATCTTGACAGGCATTGATTCAATTTAGTGATGTTGGGACAGCATCTGCTGCTAGAGAGGCATTGGATGGGAGAAGTATACCAAAGTATGGCTAGTCCTTTGTTTGAACATACCTTGGATTTATTCAACTTGCTTTCCACTTTACGTTTGATTAATTAGTGTACTTGCCCGCGCAAAGCGCGGTCATAGAATCTTATGACAGAAAGCATATGTGGAGAGCATTTCAGATTAAATATATGAAATAATTCAGTTAAACAGTATAGGTGAACGTGACTTAACAAAACATAATAAATAGAAGAATAACAGAAAAGAGAACAAATATCAAGTTAAGAATCTGGAGGATGTAACCCTAGAATGTTTTTGCCTTTCCTTCTTCTAAGGCATTGCTTGTATTTTTCTTTCAATATGAATTATGGACACTTATATTTTCATAAAGTTGATATTATTTTTGTTTTGCTCGCATGCCTTGTGTCTATAATCCAAGGAAATGGGTGATTTATGATGAGGTTACTCATCGTATTAGAGTATCGTAGATGAAATAAAGGCTTACATTCGGTCTCCTGTGTGATAAGAATGTGCTGCCAATGGTTTTCTCAAAAAAAAAAAAAAAAAGAAAAGAAAGTGCTACCAAGGATGTGACCTAGTGGTCAATGTAGTGGTTGAGAGCCATAAGGTCTCAGATTCGAATACCAGTAGAGACAAAAAATACTAGGTGATTCTTTACATCTATAGTTCATGGTGGACAGAGTTACCTTGTAACTATTGCTGGTAGGAGGTGATAGGTATCCCGTGGAATTTGTCGAGCACGAAAGCTGGCTTGGACACCACAGCCATAAAATAATAATAATAAGTGGAATGATTAAAAGAGAAACAGTGAAGACATATCATATAAAAAGAAACAACCCAACTTTAGGAATTTAGTTAAAAAGGCCAAGAAGTCCCTTTTTGTTAGCTGTCAGGAGTACTTTAAGGTTATTTTGAGTAAATTAAAAGTGGGTACCATGCTTACCTGCTATCTTCCTATATATAGAGAGATGCCTTTAAGCAATAATGGATTCTAGTAAAGAATTGTTTCATTTTTAAAATAAAACCTCTAACTAACTAGAAAGTAACTGAAAGAGTTAATGTTGTTAAATGCCTTTCTCTTTTAATTCAGCAATGAATGTACACGATTATAGATTTATTGAAATAGTGAATCTTATTTTTCAACAAATATTTTGAGGGTAAAATAAGAGAAGTCAAAAAATTGACAAAAAAGATAAAAACCAGTAGGCGAGGTGCCACATCACCTCCTTGTTACCTAGTTTTTTATACAGATAGAATTTTGGGATAGAATCCTAACTTTAATTTTTATCTCAGGTACCTGCTTCCAGAACATGTTAATCATTGTCACTTGCGCATCTCATATTCAGCACACACGGATCTTAATATCAAGTTTCAATCTCATCGAAGCAGGTAACACAGATTTACCTAGACAGCTTTTTGTATATATGACTTTGTTTCTTTATATTCTTATTGTTATTGCTATACTTGCTTGCATTTTTCTTTGCTAATTTTATCATTATCTGCTTTTGGTTTACAGTTGAGGTGTTCTCTAATTTTTTATGCTTCTTGTCATCTAGGGTTTAGTGAAGCTCGGCAGCTAAAACACAGATGTGTTTGTCATGGCCTCGTAGTAATTTTCTTTATCTCATAATAGTGGTTAACAGCGTTCTTCTCATTTCCCATTTAGATGACCATGTGAAGATCCTTGTTTTATACTGAGTTCATGGTTTGGAGAATGCTTGTCTATTTTTGTAAGAATCACTTACTGTGTATTCATTTCAAATACGTTAGTTGAGTATATTGCCTTTGGTAAAGAAATATGAATCGATGAATGTTGACTTTTATTTGTATCTGGCATCACTTATCGTGGGGATCTAGTTAGCAGACAAAAACACGGGATATAAGTTAGATGAGTATATTTGCCTTTGGTTAAGAACCTCTGTGATGTTTATTGTGTTCCTGGTGTCTCTTCCAGTGTCACATCTACTTACCGGTGCATTGGAAGGTATGCATGAAAACTGATGTGGAAAACTATTAGGTTGATATAGGGATAAGAGTGAGAGTTTATAGAATATATTTTTAGTGAATTCCTGATTTCTGTAAAATGTAATCTATTTGTCCATTTTACATGACATTCATTCCATTCTTTGATGGCTTAAAGGTTTGATGATATTCCTTTTTATATAACTCTCCCATCTTTCAAGAACTAGTATCATAAACTATTCAAATTTTAAACTTTGATGTGATATTATGTCTGTAAGTCTTAACTTTTCAACCACTAAATTAGTTTAGTTCACTATCATCAATATTATATAGAATTCAAATTAACATCTTAATTTTCTTTACAAGTCAAGCATCATCATATAACAAGGCATGGACGAGTTATTTAGTGCTGGAGCGAAACCAGTCCAATAGAGCTGATTGAATATAGATGATGCACCTACTAATTTGGAGTTGATGCATACTTGATTGATCGATTGATTTCGAGTTCTTCATCTGAATAGTCATATGAACTGAGCTTTTAGAGTGTGCTATGGGGTAGCATTTTGTTTTGTAGTTATTTTGTGGTATAGTTGCTGTGGTAATTCCATAATGGTGATCTTTGTTTAATAGCAGTGTTTTTGCACTTATCATTGCCTTCAAGATATATAATGTGTCTAATTCAACCTTTTGGGGAAATATGTATTTCAGAGTTTGCCAAATTTCAGGATTATATAATTTAGTCGATCTGATATTCTAGAAGCTTACATCAGTTTGATTCACATTTAATTCCTTCTTTTATTGTATAGGGACTACACAAACCCTTA</genome_strand>
        <mrna_strand>TCGCAACCAAGCGTTTGTCGAATTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGACCTTAATCAGGCAATCAATATGGTTTCATATTATGCTTCATCTTCAGAGCCTGCTCAAGTTCGTGGCAAGACGGTGTACATTCAATATTCTAATAGGAATGAAATTGTCAATAATAAGAGTCCGGGAGATGTTCCAGGAAATGTTTTGCTGGTGACTATCGAGGGTGTTGAAGCTGGTGATGTCAGTATCGATGTCATTCATTTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGTCATTATTTAAGATCTTTTGTTGGAGACATTCTGGATATGTAATCATGTCGGTCATAAACCTTTCTATGGCTTGCATATACAG.......................................................................................................................................GTATTTTCAGCCTTTGGTTTTGTTCAAAAGATTGCTACTTTTGAAAAGGCTGCAGGTTTTCAG................................................................................................GCATTGATTCAATTTAGTGATGTTGGGACAGCATCTGCTGCTAGAGAGGCATTGGATGGGAGAAGTATACCAAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACCTGCTTCCAGAACATGTTAATCATTGTCACTTGCGCATCTCATATTCAGCACACACGGATCTTAATATCAAGTTTCAATCTCATCGAAGCAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGACTACACAAACCCTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E565217" ref_strand="+" ref_description="SGN-E565217 [3657]">
      <seq>aaaagaagcagtactcaaagtccgttaaaaaatagcccgacggtgggaatcgtaaccctaatcggccgatgtcaacatccgggcaacagcagttccggtacacgcagacaccgtcgaaagttcttcaccgtccggaatctcccatgggattgcagcgatgaagagctagtagagctttgcaagccctttggtaaaattgtcaatacaaagtgcaacgtcggggccaatcgcaaccaagcgtttgtcgaatttgctgaccttaatcaggcaatcaacatggtttcatattatgcttcatcttcagagcctgctcaagttcgtggcaagacggtgtacattcagtattctaacaggaatgaaattgtcaataataagagtcccgggagatgttccaggaaatgttttgctggtgactatcgagggtgttgaagctggtgatgtcagtatcgatgtcattcatttggtattttcagcctttggttttgttcaaaagatcgctacttttgagaaggctgcaggttttcaggcattgattcaatttagtgatgttgggacagcatctgctggctaaagaggcattggatggggag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="-" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="90676" stop="88101"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90376" g_stop="90124" g_length="253"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="252" r_length="252" r_score="0.964"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="90123" i_stop="89533" i_length="591">
            <donor d_prob="0.971" d_score="0.98"/>
            <acceptor a_prob="0.959" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="89532" g_stop="89323" g_length="210"/>
          <reference_exon_boundary r_type="cDNA" r_start="253" r_stop="463" r_length="211" r_score="0.976"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="89322" i_stop="88622" i_length="701">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.927" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="88621" g_stop="88559" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="464" r_stop="526" r_length="63" r_score="0.968"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="88558" i_stop="88463" i_length="96">
            <donor d_prob="0.978" d_score="0.96"/>
            <acceptor a_prob="0.997" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="88462" g_stop="88403" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="527" r_stop="587" r_length="61" r_score="0.950"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="-" ref_id="SGN-E565217" ref_strand="+">
        <total_alignment_score>0.968</total_alignment_score>
        <cumulative_length_of_scored_exons>586</cumulative_length_of_scored_exons>
        <coverage percentage="0.993" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E565217" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90376" e_stop="90124"/>
          <exon e_start="89532" e_stop="89323"/>
          <exon e_start="88621" e_stop="88559"/>
          <exon e_start="88462" e_stop="88403"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAGAACAAGTTCTCAAAGTCCGTTAAAAAAAATAGCCCGACGGTGGGAATCGTAACCCTAATCGGCCGATGTCAACATCCGGGCAACAGCAGTTCCGGTACACGCAGACACCGTCGAAAGTTCTTCACC-TCCGGAATCTTCCATGGGATTGCAGCGATGAAGAGCTAGTAGAGCTTTGCAAGCCCTTTGGTAAAATTGTCAATACAAAGTGTAACGTCGGGGCCAATCGCAACCAAGCGTTTGTCGAATTTGTAAGTTGTTTTTTATTTGATTATCACAATTGATTGTCTTAAGAGTGGGAACGATGGACTTCCGTTTTTAGATTTCTTGGTTGCGGCTAAATGTGTGTAGCTAGAGTTCAGTTACTAAATGTGTCTACTGTTCAAGCTCTTTCAGTTCTTATTGTTCGTTTCATGGCAGATATGCTCCATGGGTAACTCATTTTGAATGATTAGGAGATGACTGGGTTCTTGAAGTTAGGATATATCAGTTCAAACCCCAAAACACTGTGTGTAAGTAGACAATCCTATAGCCAGACAAATTCCTCGGAGTTTGTACTTGTAGGAATGCCCTGCCCCAGCCAGCAAATTAGTTGAGGTGTGTTCAAACTGGTTCTGGAATGGTTTGGATCTGTCATAATAAATTTGTAAATTAGAGTATTAGGAGCTTCCATAATGAATTTGTGAACTGTAATTGTAATTGTAGAATAATTAACTGCTTGAAATAGTTCAGTTACACTCGTGGGTTTCATTCTAAAGCAATTCTTTTGTATATACGCCTTTGCCTTATGAGTGCGTTAACATGCATTATTACCCTCTAATCTGCATATTTGTCAACTGCAGGCTGACCTTAATCAGGCAATCAATATGGTTTCATATTATGCTTCATCTTCAGAGCCTGCTCAAGTTCGTGGCAAGACGGTGTACATTCAATATTCTAATAGGAATGAAATTGTCAATAATAAGAGT-CCGGGAGATGTTCCAGGAAATGTTTTGCTGGTGACTATCGAGGGTGTTGAAGCTGGTGATGTCAGTATCGATGTCATTCATTTGGTGAGTGTCTTGTTGCTTTCTCTCCTCTTTATGGAGAAAATATTTCCAAGTAAGCTAATTCAGGACTTATGGACTGTTCAGAAGTCGTGCCTTATCAAGAGTTAAGTATTCATCCAATAATCCTTAATAACATTTTGAACACAGCATGACTCCCGAAGAATTTTGTAGTTTGATACAAGTCCCCCTGAAAAAAGGAAAAAACACAACTAGTGGACTTCAATGAAGAATATTGTTATGTTGCTTTGTGTTAAAATATATTCTCTTATCTTTTCTTGTTTTAAAATATATTTTCTCTAGCATAGCAGTTTGTTCTTGGGACATTCTTCTAGTCTCTTGGAGCCTTTACTGCTTTCAGTAGCCTGAAACCCTAAGCTATGGTTCAGATTTTAGAAGAGCTAAATCTTACTTATTGTTTCACTTTCATCGCATATAACAACATTAGATGATGGTAGTGTTAACTAAAGTTGATTGAATCACAGATGGTCATTATTTAAGATCTTTTGTTGGAGACATTCTGGATATGTAATCATGTCGGTCATAAACCTTTCTATGGCTTGCATATACAGGTGTTACTCTGCACTCACAATTTAGTTCCTTTGTGTTTCTTCTTCAATGTGTTTTCGGAAACATAGTACACGTTGATAGTCCTTTATTACCTTCCTCTGTCTGATTTACTTTTAACGGGCCAAAACCCATTTCAGGTATTTTCAGCCTTTGGTTTTGTTCAAAAGATTGCTACTTTTGAAAAGGCTGCAGGTTTTCAGGTCCGTATGTCTGTGGACCAATGAGTTTTGGCTTTTTCTTAATTTTGGGTGGATGAAATGGCAGATTGCTAATGAGTTTCTCTTACATCTTGACAGGCATTGATTCAATTTAGTGATGTTGGGACAGCATCTGCT-GCTAGAGAGGCATTGGATGGG</genome_strand>
        <mrna_strand>AAAAGAAGCAGTACTCAAAGTCCGTT--AAAAAATAGCCCGACGGTGGGAATCGTAACCCTAATCGGCCGATGTCAACATCCGGGCAACAGCAGTTCCGGTACACGCAGACACCGTCGAAAGTTCTTCACCGTCCGGAATCTCCCATGGGATTGCAGCGATGAAGAGCTAGTAGAGCTTTGCAAGCCCTTTGGTAAAATTGTCAATACAAAGTGCAACGTCGGGGCCAATCGCAACCAAGCGTTTGTCGAATTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGACCTTAATCAGGCAATCAACATGGTTTCATATTATGCTTCATCTTCAGAGCCTGCTCAAGTTCGTGGCAAGACGGTGTACATTCAGTATTCTAACAGGAATGAAATTGTCAATAATAAGAGTCCCGGGAGATGTTCCAGGAAATGTTTTGCTGGTGACTATCGAGGGTGTTGAAGCTGGTGATGTCAGTATCGATGTCATTCATTTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTTTCAGCCTTTGGTTTTGTTCAAAAGATCGCTACTTTTGAGAAGGCTGCAGGTTTTCAG................................................................................................GCATTGATTCAATTTAGTGATGTTGGGACAGCATCTGCTGGCTAAAGAGGCATTGGATGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E333355" ref_strand="+" ref_description="SGN-E333355 [cTOD-20-E13]">
      <seq>gaagacttagagaaaaatgagacaagccatggagatgcagaattgtgccatccgtcgagtcccaaagaaaagaacaagttctcaaagtccgttaaaaaaaatagcccgacggtgggaatcgtaaccctaatcggccgatgtcaacatccgggcaacagcagttccggtacacgcagacaccgtcgaaagttcttcacctccggaatcttccatgggattgcagcgatgaagagctagtagagctttgcaagccctttggtaaaattgtcaatacaaagtgtaacgtcggggccaatcgcaaccaagcgtttgtcgaatttgctgaccttaatcaggcaatcaatatggtttcatattatgcttcatcttcagagcctgctcaagttcgtggcaagacggtgtacattcaatattctaataggaatgaaattgtcaataataagagtccgggagatgttccaggaaatgttttgctggtgactatcgagggtgttgaagctggtgatgtcagtatcgatgtcattcatttgatggtcattatttaagatcttttgttggagacattctggatatgtaatcatgtcggtcataaacctttctatggcttgcatatacaggtattttcagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="-" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="90690" stop="88452"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90390" g_stop="90124" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="54" r_stop="320" r_length="267" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="90123" i_stop="89533" i_length="591">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.959" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="89532" g_stop="89323" g_length="210"/>
          <reference_exon_boundary r_type="cDNA" r_start="321" r_stop="530" r_length="210" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="89322" i_stop="88844" i_length="479">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="88843" g_stop="88757" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="531" r_stop="617" r_length="87" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="88756" i_stop="88622" i_length="135">
            <donor d_prob="0.953" d_score="1.00"/>
            <acceptor a_prob="0.927" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="88621" g_stop="88611" g_length="11"/>
          <reference_exon_boundary r_type="cDNA" r_start="618" r_stop="628" r_length="11" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="-" ref_id="SGN-E333355" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>575</cumulative_length_of_scored_exons>
        <coverage percentage="0.916" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E333355" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90390" e_stop="90124"/>
          <exon e_start="89532" e_stop="89323"/>
          <exon e_start="88843" e_stop="88757"/>
          <exon e_start="88621" e_stop="88611"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCGAGTCCCAAAGAAAAGAACAAGTTCTCAAAGTCCGTTAAAAAAAATAGCCCGACGGTGGGAATCGTAACCCTAATCGGCCGATGTCAACATCCGGGCAACAGCAGTTCCGGTACACGCAGACACCGTCGAAAGTTCTTCACCTCCGGAATCTTCCATGGGATTGCAGCGATGAAGAGCTAGTAGAGCTTTGCAAGCCCTTTGGTAAAATTGTCAATACAAAGTGTAACGTCGGGGCCAATCGCAACCAAGCGTTTGTCGAATTTGTAAGTTGTTTTTTATTTGATTATCACAATTGATTGTCTTAAGAGTGGGAACGATGGACTTCCGTTTTTAGATTTCTTGGTTGCGGCTAAATGTGTGTAGCTAGAGTTCAGTTACTAAATGTGTCTACTGTTCAAGCTCTTTCAGTTCTTATTGTTCGTTTCATGGCAGATATGCTCCATGGGTAACTCATTTTGAATGATTAGGAGATGACTGGGTTCTTGAAGTTAGGATATATCAGTTCAAACCCCAAAACACTGTGTGTAAGTAGACAATCCTATAGCCAGACAAATTCCTCGGAGTTTGTACTTGTAGGAATGCCCTGCCCCAGCCAGCAAATTAGTTGAGGTGTGTTCAAACTGGTTCTGGAATGGTTTGGATCTGTCATAATAAATTTGTAAATTAGAGTATTAGGAGCTTCCATAATGAATTTGTGAACTGTAATTGTAATTGTAGAATAATTAACTGCTTGAAATAGTTCAGTTACACTCGTGGGTTTCATTCTAAAGCAATTCTTTTGTATATACGCCTTTGCCTTATGAGTGCGTTAACATGCATTATTACCCTCTAATCTGCATATTTGTCAACTGCAGGCTGACCTTAATCAGGCAATCAATATGGTTTCATATTATGCTTCATCTTCAGAGCCTGCTCAAGTTCGTGGCAAGACGGTGTACATTCAATATTCTAATAGGAATGAAATTGTCAATAATAAGAGTCCGGGAGATGTTCCAGGAAATGTTTTGCTGGTGACTATCGAGGGTGTTGAAGCTGGTGATGTCAGTATCGATGTCATTCATTTGGTGAGTGTCTTGTTGCTTTCTCTCCTCTTTATGGAGAAAATATTTCCAAGTAAGCTAATTCAGGACTTATGGACTGTTCAGAAGTCGTGCCTTATCAAGAGTTAAGTATTCATCCAATAATCCTTAATAACATTTTGAACACAGCATGACTCCCGAAGAATTTTGTAGTTTGATACAAGTCCCCCTGAAAAAAGGAAAAAACACAACTAGTGGACTTCAATGAAGAATATTGTTATGTTGCTTTGTGTTAAAATATATTCTCTTATCTTTTCTTGTTTTAAAATATATTTTCTCTAGCATAGCAGTTTGTTCTTGGGACATTCTTCTAGTCTCTTGGAGCCTTTACTGCTTTCAGTAGCCTGAAACCCTAAGCTATGGTTCAGATTTTAGAAGAGCTAAATCTTACTTATTGTTTCACTTTCATCGCATATAACAACATTAGATGATGGTAGTGTTAACTAAAGTTGATTGAATCACAGATGGTCATTATTTAAGATCTTTTGTTGGAGACATTCTGGATATGTAATCATGTCGGTCATAAACCTTTCTATGGCTTGCATATACAGGTGTTACTCTGCACTCACAATTTAGTTCCTTTGTGTTTCTTCTTCAATGTGTTTTCGGAAACATAGTACACGTTGATAGTCCTTTATTACCTTCCTCTGTCTGATTTACTTTTAACGGGCCAAAACCCATTTCAGGTATTTTCAGC</genome_strand>
        <mrna_strand>GTCGAGTCCCAAAGAAAAGAACAAGTTCTCAAAGTCCGTTAAAAAAAATAGCCCGACGGTGGGAATCGTAACCCTAATCGGCCGATGTCAACATCCGGGCAACAGCAGTTCCGGTACACGCAGACACCGTCGAAAGTTCTTCACCTCCGGAATCTTCCATGGGATTGCAGCGATGAAGAGCTAGTAGAGCTTTGCAAGCCCTTTGGTAAAATTGTCAATACAAAGTGTAACGTCGGGGCCAATCGCAACCAAGCGTTTGTCGAATTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGACCTTAATCAGGCAATCAATATGGTTTCATATTATGCTTCATCTTCAGAGCCTGCTCAAGTTCGTGGCAAGACGGTGTACATTCAATATTCTAATAGGAATGAAATTGTCAATAATAAGAGTCCGGGAGATGTTCCAGGAAATGTTTTGCTGGTGACTATCGAGGGTGTTGAAGCTGGTGATGTCAGTATCGATGTCATTCATTTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGTCATTATTTAAGATCTTTTGTTGGAGACATTCTGGATATGTAATCATGTCGGTCATAAACCTTTCTATGGCTTGCATATACAG.......................................................................................................................................GTATTTTCAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E482515" ref_strand="+" ref_description="SGN-E482515 [cSTD-22-B3]">
      <seq>gaaaagaagcagtactcaaagtccgttaaaaaatagcccgacggtgggaatcgtaaccctaatcggccgatgtcaacatccgggcaacagcagttccggtacacgcagacaccgtcgaaagttcttcacctccggaatctcccatgggattgcagcgatgaagagctagtagagctttgcaagccctttggtaaaattgtcaatacaaagtgcaacgtcggggccaatcgcaaccaagcgtttgtcgaatttgctgaccttaatcaggcaatcaacatggtttcatattatgcttcatcttcagagcctgctcaagttcgtggcaagacggtgtacattcagtattctaacaggaatgaaattgtcaataataagagtcccggagatgttccaggaaatgttttgctggtgactatcgagggtgttgaagctggtgatgtcagtatcgatgtcattcatttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="-" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="90677" stop="89023"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90377" g_stop="90124" g_length="254"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="252" r_length="252" r_score="0.972"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="90123" i_stop="89533" i_length="591">
            <donor d_prob="0.971" d_score="0.98"/>
            <acceptor a_prob="0.959" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="89532" g_stop="89323" g_length="210"/>
          <reference_exon_boundary r_type="cDNA" r_start="253" r_stop="462" r_length="210" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="-" ref_id="SGN-E482515" ref_strand="+">
        <total_alignment_score>0.976</total_alignment_score>
        <cumulative_length_of_scored_exons>464</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E482515" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90377" e_stop="90124"/>
          <exon e_start="89532" e_stop="89323"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAAAGAACAAGTTCTCAAAGTCCGTTAAAAAAAATAGCCCGACGGTGGGAATCGTAACCCTAATCGGCCGATGTCAACATCCGGGCAACAGCAGTTCCGGTACACGCAGACACCGTCGAAAGTTCTTCACCTCCGGAATCTTCCATGGGATTGCAGCGATGAAGAGCTAGTAGAGCTTTGCAAGCCCTTTGGTAAAATTGTCAATACAAAGTGTAACGTCGGGGCCAATCGCAACCAAGCGTTTGTCGAATTTGTAAGTTGTTTTTTATTTGATTATCACAATTGATTGTCTTAAGAGTGGGAACGATGGACTTCCGTTTTTAGATTTCTTGGTTGCGGCTAAATGTGTGTAGCTAGAGTTCAGTTACTAAATGTGTCTACTGTTCAAGCTCTTTCAGTTCTTATTGTTCGTTTCATGGCAGATATGCTCCATGGGTAACTCATTTTGAATGATTAGGAGATGACTGGGTTCTTGAAGTTAGGATATATCAGTTCAAACCCCAAAACACTGTGTGTAAGTAGACAATCCTATAGCCAGACAAATTCCTCGGAGTTTGTACTTGTAGGAATGCCCTGCCCCAGCCAGCAAATTAGTTGAGGTGTGTTCAAACTGGTTCTGGAATGGTTTGGATCTGTCATAATAAATTTGTAAATTAGAGTATTAGGAGCTTCCATAATGAATTTGTGAACTGTAATTGTAATTGTAGAATAATTAACTGCTTGAAATAGTTCAGTTACACTCGTGGGTTTCATTCTAAAGCAATTCTTTTGTATATACGCCTTTGCCTTATGAGTGCGTTAACATGCATTATTACCCTCTAATCTGCATATTTGTCAACTGCAGGCTGACCTTAATCAGGCAATCAATATGGTTTCATATTATGCTTCATCTTCAGAGCCTGCTCAAGTTCGTGGCAAGACGGTGTACATTCAATATTCTAATAGGAATGAAATTGTCAATAATAAGAGTCCGGGAGATGTTCCAGGAAATGTTTTGCTGGTGACTATCGAGGGTGTTGAAGCTGGTGATGTCAGTATCGATGTCATTCATTTG</genome_strand>
        <mrna_strand>GAAAAGAAGCAGTACTCAAAGTCCGTT--AAAAAATAGCCCGACGGTGGGAATCGTAACCCTAATCGGCCGATGTCAACATCCGGGCAACAGCAGTTCCGGTACACGCAGACACCGTCGAAAGTTCTTCACCTCCGGAATCTCCCATGGGATTGCAGCGATGAAGAGCTAGTAGAGCTTTGCAAGCCCTTTGGTAAAATTGTCAATACAAAGTGCAACGTCGGGGCCAATCGCAACCAAGCGTTTGTCGAATTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGACCTTAATCAGGCAATCAACATGGTTTCATATTATGCTTCATCTTCAGAGCCTGCTCAAGTTCGTGGCAAGACGGTGTACATTCAGTATTCTAACAGGAATGAAATTGTCAATAATAAGAGTCCCGGAGATGTTCCAGGAAATGTTTTGCTGGTGACTATCGAGGGTGTTGAAGCTGGTGATGTCAGTATCGATGTCATTCATTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E248228" ref_strand="+" ref_description="SGN-E248228 [cLEF-55-E21]">
      <seq>aagaacaagttctcaaagtccgttaaaaaaaatagcccgacggtgggaatcgtaaccctaatcggccgatgtcaacatccgggcaacagcagttccggtacacgcagacaccgtcgaaagttcttcacctccggaatcttccatgggattgcagcgatgaagagctagtagagctttgcaagccctttggtaaaattgtcaatacaaagtgtaacgtcggggccaatcgcaaccaagcgtttgtcgaatttgctgaccttaatcaggcaatcaatatggtttcatattatgcttcatcttcagagcctgctcaagttcgtggcaagacggtgtacattcaatattctaataggaatgaaattgtcaataataagagtccgggagatgttccaagaaatgttttgctggtgactatcgagggtgttgaagctggtgatgtcagtatcgatgtcattcatttgatggtcattatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="-" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="90674" stop="89017"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90374" g_stop="90124" g_length="251"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="251" r_length="251" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="90123" i_stop="89533" i_length="591">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.959" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="89532" g_stop="89323" g_length="210"/>
          <reference_exon_boundary r_type="cDNA" r_start="252" r_stop="461" r_length="210" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="-" ref_id="SGN-E248228" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>461</cumulative_length_of_scored_exons>
        <coverage percentage="0.975" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E248228" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90374" e_stop="90124"/>
          <exon e_start="89532" e_stop="89323"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGAACAAGTTCTCAAAGTCCGTTAAAAAAAATAGCCCGACGGTGGGAATCGTAACCCTAATCGGCCGATGTCAACATCCGGGCAACAGCAGTTCCGGTACACGCAGACACCGTCGAAAGTTCTTCACCTCCGGAATCTTCCATGGGATTGCAGCGATGAAGAGCTAGTAGAGCTTTGCAAGCCCTTTGGTAAAATTGTCAATACAAAGTGTAACGTCGGGGCCAATCGCAACCAAGCGTTTGTCGAATTTGTAAGTTGTTTTTTATTTGATTATCACAATTGATTGTCTTAAGAGTGGGAACGATGGACTTCCGTTTTTAGATTTCTTGGTTGCGGCTAAATGTGTGTAGCTAGAGTTCAGTTACTAAATGTGTCTACTGTTCAAGCTCTTTCAGTTCTTATTGTTCGTTTCATGGCAGATATGCTCCATGGGTAACTCATTTTGAATGATTAGGAGATGACTGGGTTCTTGAAGTTAGGATATATCAGTTCAAACCCCAAAACACTGTGTGTAAGTAGACAATCCTATAGCCAGACAAATTCCTCGGAGTTTGTACTTGTAGGAATGCCCTGCCCCAGCCAGCAAATTAGTTGAGGTGTGTTCAAACTGGTTCTGGAATGGTTTGGATCTGTCATAATAAATTTGTAAATTAGAGTATTAGGAGCTTCCATAATGAATTTGTGAACTGTAATTGTAATTGTAGAATAATTAACTGCTTGAAATAGTTCAGTTACACTCGTGGGTTTCATTCTAAAGCAATTCTTTTGTATATACGCCTTTGCCTTATGAGTGCGTTAACATGCATTATTACCCTCTAATCTGCATATTTGTCAACTGCAGGCTGACCTTAATCAGGCAATCAATATGGTTTCATATTATGCTTCATCTTCAGAGCCTGCTCAAGTTCGTGGCAAGACGGTGTACATTCAATATTCTAATAGGAATGAAATTGTCAATAATAAGAGTCCGGGAGATGTTCCAGGAAATGTTTTGCTGGTGACTATCGAGGGTGTTGAAGCTGGTGATGTCAGTATCGATGTCATTCATTTG</genome_strand>
        <mrna_strand>AAGAACAAGTTCTCAAAGTCCGTTAAAAAAAATAGCCCGACGGTGGGAATCGTAACCCTAATCGGCCGATGTCAACATCCGGGCAACAGCAGTTCCGGTACACGCAGACACCGTCGAAAGTTCTTCACCTCCGGAATCTTCCATGGGATTGCAGCGATGAAGAGCTAGTAGAGCTTTGCAAGCCCTTTGGTAAAATTGTCAATACAAAGTGTAACGTCGGGGCCAATCGCAACCAAGCGTTTGTCGAATTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGACCTTAATCAGGCAATCAATATGGTTTCATATTATGCTTCATCTTCAGAGCCTGCTCAAGTTCGTGGCAAGACGGTGTACATTCAATATTCTAATAGGAATGAAATTGTCAATAATAAGAGTCCGGGAGATGTTCCAAGAAATGTTTTGCTGGTGACTATCGAGGGTGTTGAAGCTGGTGATGTCAGTATCGATGTCATTCATTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E205207" ref_strand="+" ref_description="SGN-E205207 [cLEC-16-H2]">
      <seq>tctcaaagtccgttaaaaaaaatagcccgacggtgggaatcgtaaccctaatcggccgatgtcaacatccgggcaacagcagttccggtacacgcagacaccgtcgaaagttcttcacctccggaatcttccatgggattgcagcgatgaagagctagtagagctttgcaagccctttggtaaaattgtcaatacaaagtgtaacgtcggggccaatcgcaaccaagcgtttgtcgaatttgctgaccttaatcaggcaatcaatatggtttcatattatgcttcatcttcagagcctgctcaagttcgtggcaagacggtgtacattcaatattctaataggaatgaaattgtcaataataagagtccgggagatgttccaggaaatgttttgctggtgactatcgagggtgttgaagctggtgatgtcagtatcgatgtcattcatttggtattttcagcctttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="-" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="90664" stop="89014"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90364" g_stop="90124" g_length="241"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="241" r_length="241" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="90123" i_stop="89533" i_length="591">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.959" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="89532" g_stop="89323" g_length="210"/>
          <reference_exon_boundary r_type="cDNA" r_start="242" r_stop="451" r_length="210" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="-" ref_id="SGN-E205207" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>451</cumulative_length_of_scored_exons>
        <coverage percentage="0.966" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E205207" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90364" e_stop="90124"/>
          <exon e_start="89532" e_stop="89323"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTCAAAGTCCGTTAAAAAAAATAGCCCGACGGTGGGAATCGTAACCCTAATCGGCCGATGTCAACATCCGGGCAACAGCAGTTCCGGTACACGCAGACACCGTCGAAAGTTCTTCACCTCCGGAATCTTCCATGGGATTGCAGCGATGAAGAGCTAGTAGAGCTTTGCAAGCCCTTTGGTAAAATTGTCAATACAAAGTGTAACGTCGGGGCCAATCGCAACCAAGCGTTTGTCGAATTTGTAAGTTGTTTTTTATTTGATTATCACAATTGATTGTCTTAAGAGTGGGAACGATGGACTTCCGTTTTTAGATTTCTTGGTTGCGGCTAAATGTGTGTAGCTAGAGTTCAGTTACTAAATGTGTCTACTGTTCAAGCTCTTTCAGTTCTTATTGTTCGTTTCATGGCAGATATGCTCCATGGGTAACTCATTTTGAATGATTAGGAGATGACTGGGTTCTTGAAGTTAGGATATATCAGTTCAAACCCCAAAACACTGTGTGTAAGTAGACAATCCTATAGCCAGACAAATTCCTCGGAGTTTGTACTTGTAGGAATGCCCTGCCCCAGCCAGCAAATTAGTTGAGGTGTGTTCAAACTGGTTCTGGAATGGTTTGGATCTGTCATAATAAATTTGTAAATTAGAGTATTAGGAGCTTCCATAATGAATTTGTGAACTGTAATTGTAATTGTAGAATAATTAACTGCTTGAAATAGTTCAGTTACACTCGTGGGTTTCATTCTAAAGCAATTCTTTTGTATATACGCCTTTGCCTTATGAGTGCGTTAACATGCATTATTACCCTCTAATCTGCATATTTGTCAACTGCAGGCTGACCTTAATCAGGCAATCAATATGGTTTCATATTATGCTTCATCTTCAGAGCCTGCTCAAGTTCGTGGCAAGACGGTGTACATTCAATATTCTAATAGGAATGAAATTGTCAATAATAAGAGTCCGGGAGATGTTCCAGGAAATGTTTTGCTGGTGACTATCGAGGGTGTTGAAGCTGGTGATGTCAGTATCGATGTCATTCATTTG</genome_strand>
        <mrna_strand>TCTCAAAGTCCGTTAAAAAAAATAGCCCGACGGTGGGAATCGTAACCCTAATCGGCCGATGTCAACATCCGGGCAACAGCAGTTCCGGTACACGCAGACACCGTCGAAAGTTCTTCACCTCCGGAATCTTCCATGGGATTGCAGCGATGAAGAGCTAGTAGAGCTTTGCAAGCCCTTTGGTAAAATTGTCAATACAAAGTGTAACGTCGGGGCCAATCGCAACCAAGCGTTTGTCGAATTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGACCTTAATCAGGCAATCAATATGGTTTCATATTATGCTTCATCTTCAGAGCCTGCTCAAGTTCGTGGCAAGACGGTGTACATTCAATATTCTAATAGGAATGAAATTGTCAATAATAAGAGTCCGGGAGATGTTCCAGGAAATGTTTTGCTGGTGACTATCGAGGGTGTTGAAGCTGGTGATGTCAGTATCGATGTCATTCATTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E717430" ref_strand="-" ref_description="SGN-E717430 [FC01AG11]">
      <seq>ttttttttttttttttttttttttttttttttttttttttttttttttttttttaatctaccaaaaacctttattcttaaagcatgtataaataccacaatcgaagtgcaaataataaaattagttatggatcagccacatatagctctgtaaaatgatttattacagacacccaaaacatagaaaaaaaagtaaagtctaaagggagatgaaaccttcacggacgagaagaccaaacatgagagtaacaagacctgttgttatgctttgtgttggagtcatccatgtctgtgaatatgctccaagcgtaaatgcagctccaactattccgatcaagaacgacaccatgttctgattcattttctctttgttttgtattcttcaattcggccg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="+" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="87553" stop="100401"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="98743" g_stop="98781" g_length="39"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="39" r_length="39" r_score="0.487"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="98782" i_stop="99514" i_length="733">
            <donor d_prob="0.910" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="99515" g_stop="99525" g_length="11"/>
          <reference_exon_boundary r_type="cDNA" r_start="40" r_stop="50" r_length="11" r_score="0.727"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="99526" i_stop="99769" i_length="244">
            <donor d_prob="0.648" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="99770" g_stop="100093" g_length="324"/>
          <reference_exon_boundary r_type="cDNA" r_start="51" r_stop="374" r_length="324" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="+" ref_id="SGN-E717430" ref_strand="-">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>374</cumulative_length_of_scored_exons>
        <coverage percentage="0.952" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E717430" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="98743" e_stop="98781"/>
          <exon e_start="99515" e_stop="99525"/>
          <exon e_start="99770" e_stop="100093"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATCCTTTGCTTACATTTTGATTTGTGAAGTTCATGGATGCACGTCTGAAGTTATTACTAATATGTTAGCATTAGTTTACCTAACTTAATATGCAGGAACAAAGTATCTCTCATGGGCTTCAACAGGATTTATCGGTTGATTCATGAAGGTTTCCTAATCGATGTTAGGGACATACGACATGTTTTGGATCATAGACCAAATATTGAATCTACTAATGAATCTGAGGGATTATGTGCTAAGAGTTTGTTCGACAGAAATACATGCTATAGCGGATGCTTCTAGGTTTGCAACAAACCTAATCTGATATCTAATTTGACATGACTCAAAATCCTAACATTCCAACATTACGGATACTGATGTTTCGTTGGATAATGATGGGAAACAGAAATTTGACAAAAGATGTGCAAATTTTTTTCTCAATAGTATTAATTGTGTGCAACATTAAGTATAGCTTAAAAATTAGTGTTTATACACATTAACATTCAAACACTAACTGGAATTCTTGGTTTCTCAACCGGACACAATCACGGTAACATATACATCACAATAACTAGGTCATGGAGCATGAAACGTTGTTGACTAATAAATGCGATGTGAGATAAATAATTGCGGCAGTACGAACTATGAAGTAGTAAGTAACAAAAAAGAAACGAACTTGTATGTTTGTGCCTTTGTAAAATTTAAAAGATGGTGAGTGCAACTGGTTTTACATTAACCAGTAGTGATGATAAAAACAGCTCCATCCCTAATCTGTCTATATGCCAAAAACAGGTTTATTTTTGGTAACAATCATAGTCCAATCTAAAATTTGAAGTTTTAAATTCCTTTTTTCAAAATTTATTTTCCAAGATACAATTCTCCCAAAGTTTCATTTTAGCATTTCCACGGGTGTAGTTTGGTTAAGATTTGATTTGATGTGGAAAAAATTAAAGGTGAAGTTGTGTCTGGTCATGAAAATACAATATTAATTAGAACAAATTAATCTATGCTATCGTAAGTTACCATTTGAACGGGAAAAAAAAGAAGGATAAATCTACCAAAAACCTTTATTCTTAAAGCATGTATAAATACCACAATCGAAGTGCAAATAATAAAATTAGTTATGGATCAGCCACATATAGCTCTGTAAAATGATTTATTACAGACACCCAAAACATAGAAAAAAAAGTAAAGTCTAAAGGGAGATGAAACCTTCACGGACGAGAAGACCAAACATGAGAGTAACAAGACCTGTTGTTATGCTTTGTGTTGGAGTCATCCATGTCTGTGAATATGCTCCAAGCGTAAATGCAGCTCCAACTATTCCGATCAAGAACGACACCATGTTCTGATTCATTTTCTCTTTGTTTT</genome_strand>
        <mrna_strand>TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTTTTTTT....................................................................................................................................................................................................................................................TTTTAATCTACCAAAAACCTTTATTCTTAAAGCATGTATAAATACCACAATCGAAGTGCAAATAATAAAATTAGTTATGGATCAGCCACATATAGCTCTGTAAAATGATTTATTACAGACACCCAAAACATAGAAAAAAAAGTAAAGTCTAAAGGGAGATGAAACCTTCACGGACGAGAAGACCAAACATGAGAGTAACAAGACCTGTTGTTATGCTTTGTGTTGGAGTCATCCATGTCTGTGAATATGCTCCAAGCGTAAATGCAGCTCCAACTATTCCGATCAAGAACGACACCATGTTCTGATTCATTTTCTCTTTGTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E231422" ref_strand="-" ref_description="SGN-E231422 [cLED-4-C17]">
      <seq>tttttttttttttttttttttttttttttttaaggataaatctaccaaaaacctttattcttaaagcatgtataaataccacaatcgaagtgcaaataataaaattagttatggatcagccacatatagctctgtaaaatgatttattacagacacccaaaacatagaaaaaaaagtaaagtctaaagggagatgaaaccttcacggacgagaagaccaaacatgagagtaacaagacctgttgttatgctttgtgttggagtcatccatgtctgtgaatatgctccaagcgtaaatgcagctccaactattccgatcaagaacgacaccatgttctgattcattttctctttgttttgtattcttagcaagcaattagagttgtttggttgaatataaataaagagacaactaataaccatccagctctctcaagggccaaagtcaacttcaccttgggaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="+" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="87553" stop="100498"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="99558" g_stop="99588" g_length="31"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="31" r_length="31" r_score="0.613"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="99589" i_stop="99766" i_length="178">
            <donor d_prob="0.000" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="99767" g_stop="100198" g_length="432"/>
          <reference_exon_boundary r_type="cDNA" r_start="32" r_stop="463" r_length="432" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="+" ref_id="SGN-E231422" ref_strand="-">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>463</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E231422" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="99558" e_stop="99588"/>
          <exon e_start="99767" e_stop="100198"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTAAATTCCTTTTTTCAAAATTTATTTTCCAAGATACAATTCTCCCAAAGTTTCATTTTAGCATTTCCACGGGTGTAGTTTGGTTAAGATTTGATTTGATGTGGAAAAAATTAAAGGTGAAGTTGTGTCTGGTCATGAAAATACAATATTAATTAGAACAAATTAATCTATGCTATCGTAAGTTACCATTTGAACGGGAAAAAAAAGAAGGATAAATCTACCAAAAACCTTTATTCTTAAAGCATGTATAAATACCACAATCGAAGTGCAAATAATAAAATTAGTTATGGATCAGCCACATATAGCTCTGTAAAATGATTTATTACAGACACCCAAAACATAGAAAAAAAAGTAAAGTCTAAAGGGAGATGAAACCTTCACGGACGAGAAGACCAAACATGAGAGTAACAAGACCTGTTGTTATGCTTTGTGTTGGAGTCATCCATGTCTGTGAATATGCTCCAAGCGTAAATGCAGCTCCAACTATTCCGATCAAGAACGACACCATGTTCTGATTCATTTTCTCTTTGTTTTGTATTCTTAGCAAGCAATTAGAGTTGTTTGGTTGAATATAAATAAAGAGACAACTAATAACCATCCAGCTCTCTCAAGGGCCAAAGTCAACTTCACCTTGGGAAA</genome_strand>
        <mrna_strand>TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT..................................................................................................................................................................................AAGGATAAATCTACCAAAAACCTTTATTCTTAAAGCATGTATAAATACCACAATCGAAGTGCAAATAATAAAATTAGTTATGGATCAGCCACATATAGCTCTGTAAAATGATTTATTACAGACACCCAAAACATAGAAAAAAAAGTAAAGTCTAAAGGGAGATGAAACCTTCACGGACGAGAAGACCAAACATGAGAGTAACAAGACCTGTTGTTATGCTTTGTGTTGGAGTCATCCATGTCTGTGAATATGCTCCAAGCGTAAATGCAGCTCCAACTATTCCGATCAAGAACGACACCATGTTCTGATTCATTTTCTCTTTGTTTTGTATTCTTAGCAAGCAATTAGAGTTGTTTGGTTGAATATAAATAAAGAGACAACTAATAACCATCCAGCTCTCTCAAGGGCCAAAGTCAACTTCACCTTGGGAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E309753" ref_strand="+" ref_description="SGN-E309753 [cLEY-26-P5]">
      <seq>agaaaatgaatcagaacatggtgtcgttcttgatcggaatagttggagctgcatttacgcttggagcatattcacagacatggatgactccaacacaaagcataacaacaggtcttgttactctcatgtttggtcttctcgtccgtgaaggtttcatctccctttagactttacttttttttctatgttttgggtgtctgtaataaatcattttacagagctatatgtggctgatccataactaattttattatttgcacttcgattgtggtatttatacatgctttaagaataaaggtttttggtaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="-" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="100384" stop="99476"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="100084" g_stop="99769" g_length="316"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="316" r_length="316" r_score="0.978"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="-" ref_id="SGN-E309753" ref_strand="+">
        <total_alignment_score>0.978</total_alignment_score>
        <cumulative_length_of_scored_exons>316</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E309753" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="100084" e_stop="99769"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAAATGAATCAGAACATGGTGTCGTTCTTGATCGGAATAGTTGGAGCTGCATTTACGCTTGGAGCATATTCACAGACATGGATGACTCCAACACAAAGCATAACAACAGGTCTTGTTACTCTCATGTTTGGTCTTCTCGTCCGTGAAGGTTTCATCTCCCTTTAGACTTTACTTTTTTTTCTATGTTTTGGGTGTCTGTAATAAATCATTTTACAGAGCTATATGTGGCTGATCCATAACTAATTTTATTATTTGCACTTCGATTGTGGTATTTATACATGCTTTAAGAATAAAGGTTTTTGGTAGATTTATCC</genome_strand>
        <mrna_strand>AGAAAATGAATCAGAACATGGTGTCGTTCTTGATCGGAATAGTTGGAGCTGCATTTACGCTTGGAGCATATTCACAGACATGGATGACTCCAACACAAAGCATAACAACAGGTCTTGTTACTCTCATGTTTGGTCTTCTCGTCCGTGAAGGTTTCATCTCCCTTTAGACTTTACTTTTTTTTCTATGTTTTGGGTGTCTGTAATAAATCATTTTACAGAGCTATATGTGGCTGATCCATAACTAATTTTATTATTTGCACTTCGATTGTGGTATTTATACATGCTTTAAGAATAAAGGTTTTTGGTAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E310793" ref_strand="+" ref_description="SGN-E310793 [cLEZ-15-E3]">
      <seq>gaatcagaacatggtgtcgttcttgatcggaatagttggagctgcatttacgcttggagcatattcacagacatggatgactccaacacaaagcataacaacaggtcttgttactctcatgtttggtcttctcgtccgtgaaggtttcatctccctttagactttacttttttttctatgttttgggtgtctgtaataaatcattttacagagctatatgtggctgatccataactaattttattatttgcacttcgattgtggtatttatacatgctttaagaataaaggtttttggtaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="-" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="100377" stop="99476"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="100077" g_stop="99781" g_length="297"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="297" r_length="297" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="300" polyA_stop="312"/>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="-" ref_id="SGN-E310793" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>297</cumulative_length_of_scored_exons>
        <coverage percentage="0.952" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E310793" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="100077" e_stop="99781"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAATCAGAACATGGTGTCGTTCTTGATCGGAATAGTTGGAGCTGCATTTACGCTTGGAGCATATTCACAGACATGGATGACTCCAACACAAAGCATAACAACAGGTCTTGTTACTCTCATGTTTGGTCTTCTCGTCCGTGAAGGTTTCATCTCCCTTTAGACTTTACTTTTTTTTCTATGTTTTGGGTGTCTGTAATAAATCATTTTACAGAGCTATATGTGGCTGATCCATAACTAATTTTATTATTTGCACTTCGATTGTGGTATTTATACATGCTTTAAGAATAAAGGTTTTTG</genome_strand>
        <mrna_strand>GAATCAGAACATGGTGTCGTTCTTGATCGGAATAGTTGGAGCTGCATTTACGCTTGGAGCATATTCACAGACATGGATGACTCCAACACAAAGCATAACAACAGGTCTTGTTACTCTCATGTTTGGTCTTCTCGTCCGTGAAGGTTTCATCTCCCTTTAGACTTTACTTTTTTTTCTATGTTTTGGGTGTCTGTAATAAATCATTTTACAGAGCTATATGTGGCTGATCCATAACTAATTTTATTATTTGCACTTCGATTGTGGTATTTATACATGCTTTAAGAATAAAGGTTTTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E307561" ref_strand="+" ref_description="SGN-E307561 [cLEY-24-J3]">
      <seq>acacgtcttgttactctcatgtttggtcttctcgtccgtgaaggtttcatctccctttagactttacttttttttctatgttttgggtgtctgtaataaatcattttacagagctatatgtggctgatccataactaattttattatttgcacttcgattgtggtatttatacatgctttaagaataaaggtttttggtcaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="-" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="100277" stop="99476"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="99977" g_stop="99781" g_length="197"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="197" r_length="197" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="201" polyA_stop="211"/>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="-" ref_id="SGN-E307561" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>197</cumulative_length_of_scored_exons>
        <coverage percentage="0.934" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E307561" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="99977" e_stop="99781"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAGGTCTTGTTACTCTCATGTTTGGTCTTCTCGTCCGTGAAGGTTTCATCTCCCTTTAGACTTTACTTTTTTTTCTATGTTTTGGGTGTCTGTAATAAATCATTTTACAGAGCTATATGTGGCTGATCCATAACTAATTTTATTATTTGCACTTCGATTGTGGTATTTATACATGCTTTAAGAATAAAGGTTTTTG</genome_strand>
        <mrna_strand>ACACGTCTTGTTACTCTCATGTTTGGTCTTCTCGTCCGTGAAGGTTTCATCTCCCTTTAGACTTTACTTTTTTTTCTATGTTTTGGGTGTCTGTAATAAATCATTTTACAGAGCTATATGTGGCTGATCCATAACTAATTTTATTATTTGCACTTCGATTGTGGTATTTATACATGCTTTAAGAATAAAGGTTTTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E231191" ref_strand="+" ref_description="SGN-E231191 [cLED-5-I22]">
      <seq>tttcccaaggtgaagttgactttggcccttgagagagctggatggttattagttgtctctttatttatattcaaccaaacaactctaattgcttgctaagaatacaaaacaaagagaaaatgaatcagaacatggtgtcgttcttgatcggaatagttggagctgcatttacgcttggagcatattcacagacatggatgactccaacacaaagcataacaacaggtcttgttactctcatgtttggtcttctcgtccgtgaaggtttcatctccctttagactttacttttttttctatgttttgggtgtctgtaatanaatcattttacag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="-" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="100498" stop="99567"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="100198" g_stop="99867" g_length="332"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="333" r_length="333" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="-" ref_id="SGN-E231191" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>332</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E231191" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="100198" e_stop="99867"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCCCAAGGTGAAGTTGACTTTGGCCCTTGAGAGAGCTGGATGGTTATTAGTTGTCTCTTTATTTATATTCAACCAAACAACTCTAATTGCTTGCTAAGAATACAAAACAAAGAGAAAATGAATCAGAACATGGTGTCGTTCTTGATCGGAATAGTTGGAGCTGCATTTACGCTTGGAGCATATTCACAGACATGGATGACTCCAACACAAAGCATAACAACAGGTCTTGTTACTCTCATGTTTGGTCTTCTCGTCCGTGAAGGTTTCATCTCCCTTTAGACTTTACTTTTTTTTCTATGTTTTGGGTGTCTGTAATA-AATCATTTTACAG</genome_strand>
        <mrna_strand>TTTCCCAAGGTGAAGTTGACTTTGGCCCTTGAGAGAGCTGGATGGTTATTAGTTGTCTCTTTATTTATATTCAACCAAACAACTCTAATTGCTTGCTAAGAATACAAAACAAAGAGAAAATGAATCAGAACATGGTGTCGTTCTTGATCGGAATAGTTGGAGCTGCATTTACGCTTGGAGCATATTCACAGACATGGATGACTCCAACACAAAGCATAACAACAGGTCTTGTTACTCTCATGTTTGGTCTTCTCGTCCGTGAAGGTTTCATCTCCCTTTAGACTTTACTTTTTTTTCTATGTTTTGGGTGTCTGTAATANAATCATTTTACAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E231714" ref_strand="+" ref_description="SGN-E231714 [cLED-4-J19]">
      <seq>taggtgtggcagcattaggaaggcacttgaagtgtttcaaggcatgaaagagaaggacgtgtcgtcttggaacataattatattaggattagctttccatggtcattctgaagaatgtatctctctttttgaagatatgaggagaatgaagtatatccctaatgaaattacttttgttggtgtattagttgcttgtagtcacgctggtaaagttgatgatggccgagaatatttcagcatgatgagaactgactacaatattgagacaaacataaggcactatggttgtatggtggatatgctagcgcgtgcaggactattgaatgaagcgtttgagttcataaacacgatggacattaaacctaatgctattatatggagaacactgctaggagcttgtaaagttcattccaatgtcaagctgggaaggtatgcgaataagcagttgcttaaattgggaagggaagacagtggggactatgtcttgctgtctaatatctatgcatcgagggatgaatgggat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="-" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="111898" stop="111120"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="111898" g_stop="111420" g_length="479"/>
          <reference_exon_boundary r_type="cDNA" r_start="45" r_stop="523" r_length="479" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="-" ref_id="SGN-E231714" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>479</cumulative_length_of_scored_exons>
        <coverage percentage="0.916" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E231714" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="111898" e_stop="111420"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAAAGAGAAGGACGTGTCGTCTTGGAACATAATTATATTAGGATTAGCTTTCCATGGTCATTCTGAAGAATGTATCTCTCTTTTTGAAGATATGAGGAGAATGAAGTATATCCCTAATGAAATTACTTTTGTTGGTGTATTAGTTGCTTGTAGTCACGCTGGTAAAGTTGATGATGGCCGAGAATATTTCAGCATGATGAGAACTGACTACAATATTGAGACAAACATAAGGCACTATGGTTGTATGGTGGATATGCTAGCGCGTGCAGGACTATTGAATGAAGCGTTTGAGTTCATAAACACGATGGACATTAAACCTAATGCTATTATATGGAGAACACTGCTAGGAGCTTGTAAAGTTCATTCCAATGTCAAGCTGGGAAGGTATGCGAATAAGCAGTTGCTTAAATTGGGAAGGGAAGACAGTGGGGACTATGTCTTGCTGTCTAATATCTATGCATCGAGGGATGAATGGGAT</genome_strand>
        <mrna_strand>TGAAAGAGAAGGACGTGTCGTCTTGGAACATAATTATATTAGGATTAGCTTTCCATGGTCATTCTGAAGAATGTATCTCTCTTTTTGAAGATATGAGGAGAATGAAGTATATCCCTAATGAAATTACTTTTGTTGGTGTATTAGTTGCTTGTAGTCACGCTGGTAAAGTTGATGATGGCCGAGAATATTTCAGCATGATGAGAACTGACTACAATATTGAGACAAACATAAGGCACTATGGTTGTATGGTGGATATGCTAGCGCGTGCAGGACTATTGAATGAAGCGTTTGAGTTCATAAACACGATGGACATTAAACCTAATGCTATTATATGGAGAACACTGCTAGGAGCTTGTAAAGTTCATTCCAATGTCAAGCTGGGAAGGTATGCGAATAAGCAGTTGCTTAAATTGGGAAGGGAAGACAGTGGGGACTATGTCTTGCTGTCTAATATCTATGCATCGAGGGATGAATGGGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E374996" ref_strand="+" ref_description="SGN-E374996 [TUS-36-E13]">
      <seq>gtgtggcagcattaggaaggcacttgaagtgtttcaaggcatgatagagaaggacgtgtcgtcttggaacataattatattaggattagctttccatggtcattctgaagaatgtatctctctttttgaagatatgaggagaatgaagtatatccctaatgaaattacttttgttggtgtattccttgcttgtagtcacgctggtaaagttgatgatggtcgagaatatttcagcatgatgagaactgactacaatattgagacaaacataaggcactatggttgtatggtggatatgctagcgcgtgcaggactattgaatgaagcgtttgagttcatatacacgatggacattaaacctaatgctattatatggagaacactgttatgagcttgtaaagtacattcccttggtaagcagggaagg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0054K23-D7rxv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0054K23.1" temp_strand="-" temp_description="C02HBa0054K23.1  AC232769.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0054K23 sequenced_by:kribb upload_account_name:korea">
        <position start="111898" stop="111213"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="111898" g_stop="111513" g_length="386"/>
          <reference_exon_boundary r_type="cDNA" r_start="42" r_stop="427" r_length="386" r_score="0.966"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0054K23.1" gen_strand="-" ref_id="SGN-E374996" ref_strand="+">
        <total_alignment_score>0.966</total_alignment_score>
        <cumulative_length_of_scored_exons>386</cumulative_length_of_scored_exons>
        <coverage percentage="0.904" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0054K23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E374996" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="111898" e_stop="111513"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAAAGAGAAGGACGTGTCGTCTTGGAACATAATTATATTAGGATTAGCTTTCCATGGTCATTCTGAAGAATGTATCTCTCTTTTTGAAGATATGAGGAGAATGAAGTATATCCCTAATGAAATTACTTTTGTTGGTGTATTAGTTGCTTGTAGTCACGCTGGTAAAGTTGATGATGGCCGAGAATATTTCAGCATGATGAGAACTGACTACAATATTGAGACAAACATAAGGCACTATGGTTGTATGGTGGATATGCTAGCGCGTGCAGGACTATTGAATGAAGCGTTTGAGTTCATAAACACGATGGACATTAAACCTAATGCTATTATATGGAGAACACTGCTAGGAGCTTGTAAAGTTCATTCCAATGTCAAGCTGGGAAGG</genome_strand>
        <mrna_strand>TGATAGAGAAGGACGTGTCGTCTTGGAACATAATTATATTAGGATTAGCTTTCCATGGTCATTCTGAAGAATGTATCTCTCTTTTTGAAGATATGAGGAGAATGAAGTATATCCCTAATGAAATTACTTTTGTTGGTGTATTCCTTGCTTGTAGTCACGCTGGTAAAGTTGATGATGGTCGAGAATATTTCAGCATGATGAGAACTGACTACAATATTGAGACAAACATAAGGCACTATGGTTGTATGGTGGATATGCTAGCGCGTGCAGGACTATTGAATGAAGCGTTTGAGTTCATATACACGATGGACATTAAACCTAATGCTATTATATGGAGAACACTGTTATGAGCTTGTAAAGTACATTCCCTTGGTAAGCAGGGAAGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>137</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="+" PGL_start="2522" PGL_stop="3960"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="2522" e_stop="2688"/>
            <exon e_start="2798" e_stop="2881"/>
            <exon e_start="2959" e_stop="3168"/>
            <exon e_start="3284" e_stop="3373"/>
            <exon e_start="3447" e_stop="3568"/>
            <exon e_start="3714" e_stop="3869"/>
            <exon e_start="3956" e_stop="3960"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.966" acc_prob="0.413" e_score="1.000"/>
          <exon-intron don_prob="0.821" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.992" acc_prob="0.786" e_score="0.944"/>
          <exon-intron don_prob="0.607" acc_prob="0.999" e_score="0.951"/>
          <exon-intron don_prob="0.985" acc_prob="0.851" e_score="0.923"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="2522" e_stop="2688" e_length="167"/>
          </exon>
          <intron i_serial="1" don_prob="0.966" acc_prob="0.413">
            <gDNA_intron_boundary i_start="2689" i_stop="2797" i_length="109"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="2798" e_stop="2881" e_length="84"/>
          </exon>
          <intron i_serial="2" don_prob="0.821" acc_prob="0.999">
            <gDNA_intron_boundary i_start="2882" i_stop="2958" i_length="77"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="2959" e_stop="3168" e_length="210"/>
          </exon>
          <intron i_serial="3" don_prob="0.991" acc_prob="0.994">
            <gDNA_intron_boundary i_start="3169" i_stop="3283" i_length="115"/>
          </intron>
          <exon e_serial="4" e_score="0.944">
            <gDNA_exon_boundary e_start="3284" e_stop="3373" e_length="90"/>
          </exon>
          <intron i_serial="4" don_prob="0.992" acc_prob="0.786">
            <gDNA_intron_boundary i_start="3374" i_stop="3446" i_length="73"/>
          </intron>
          <exon e_serial="5" e_score="0.951">
            <gDNA_exon_boundary e_start="3447" e_stop="3568" e_length="122"/>
          </exon>
          <intron i_serial="5" don_prob="0.607" acc_prob="0.999">
            <gDNA_intron_boundary i_start="3569" i_stop="3713" i_length="145"/>
          </intron>
          <exon e_serial="6" e_score="0.923">
            <gDNA_exon_boundary e_start="3714" e_stop="3869" e_length="156"/>
          </exon>
          <intron i_serial="6" don_prob="0.985" acc_prob="0.851">
            <gDNA_intron_boundary i_start="3870" i_stop="3955" i_length="86"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="3956" e_stop="3960" e_length="5"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2522" stop="2688"/>
              <exon start="2798" stop="2881"/>
              <exon start="2959" stop="3168"/>
              <exon start="3284" stop="3340"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E272288" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2567" stop="2688"/>
              <exon start="2798" stop="2881"/>
              <exon start="2959" stop="3168"/>
              <exon start="3284" stop="3373"/>
              <exon start="3447" stop="3568"/>
              <exon start="3714" stop="3869"/>
              <exon start="3956" stop="3960"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E403411" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2567" stop="2688"/>
              <exon start="2798" stop="2881"/>
              <exon start="2959" stop="3168"/>
              <exon start="3284" stop="3356"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E433389" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGAAGTCCCAATGCGATGATCTAAAAAAGCAACTGGATTCCTTGAGAAGTGCATCAGAACCCAGTAAGGATGAAGTTAATAGATTGAAGGAACTCAAGAAAATCATTTCGGCTGAAGAAAAAGAAATGGACAGGCTTACACAGGGTTCAAAACAGCTGAAAGAGAAG : GCTTCAGAACTTCAAAATAAAATAGAGAATGCAGGTGGCGAGCAATTGAAAAATCAGAAGGCAAAGGTTACTAAAATACAATCT : GATATTGATAAAAAGAGCACAGAGATCAACCGTCGTAAGGTTCAGATTGAAACAGGACAGAAAATGATTAAAAAACTGACAAAGGGGATTGAGGAATCAAACAAAGAGAAGGAAAATCTTCTTGCTGAGAAGGAGAAGTTACTTTCCATCTTCAAAGAGGTCGAACAGAAAGCTTTTACTGTTCAAGAGGACTATAAAAAGATACAGGAG : CTCATTGATCAGCACAAAGGTATTCTGATTGATGCTAAAAATGAATATGAAAATTTGAAGAAGACTATGGATGAGATGCGGTCATCAGAG : GTAGATGCTGAATACAAGTTACAAGATATGAAGAAGGTTTATAAAGATTTGGAACTCAAAGGGAAAGGATACAAGAAAAAACTCGATGATTTGCATACTGCTTTGTCGAAGCATATTGAGCA : AATTCAAAAAGACTTGGTGGACCCGGAAAAGCTTCAGGCAACTCTAAGTGATGTTACTCTTGGTCAAACTTGTGATCTTAAGACAGCTCTTGAGACAGTTTCACTTCTAGAGTCTCAACTCAAAGAGATGAACCCAAATCTTGACTCGATTTCTGA : GTATC</gDNA_template>
            <first_frame> *  S  P  N  A  M  I  *  K  S  N  W  I  P  *  E  V  H  Q  N  P  V  R  M  K  L  I  D  *  R  N  S  R  K  S  F  R  L  K  K  K  K  W  T  G  L  H  R  V  Q  N  S  *  K  R  R :   L  Q  N  F  K  I  K  *  R  M  Q  V  A  S  N  *  K  I  R  R  Q  R  L  L  K  Y  N  L :   I  L  I  K  R  A  Q  R  S  T  V  V  R  F  R  L  K  Q  D  R  K  *  L  K  N  *  Q  R  G  L  R  N  Q  T  K  R  R  K  I  F  L  L  R  R  R  S  Y  F  P  S  S  K  R  S  N  R  K  L  L  L  F  K  R  T  I  K  R  Y  R  S :   S  L  I  S  T  K  V  F  *  L  M  L  K  M  N  M  K  I  *  R  R  L  W  M  R  C  G  H  Q  R :   *  M  L  N  T  S  Y  K  I  *  R  R  F  I  K  I  W  N  S  K  G  K  D  T  R  K  N  S  M  I  C  I  L  L  C  R  S  I  L  S   : K  F  K  K  T  W  W  T  R  K  S  F  R  Q  L  *  V  M  L  L  L  V  K  L  V  I  L  R  Q  L  L  R  Q  F  H  F  *  S  L  N  S  K  R  *  T  Q  I  L  T  R  F  L   : S  I </first_frame>
            <second_frame>  E  V  P  M  R  *  S  K  K  A  T  G  F  L  E  K  C  I  R  T  Q  *  G  *  S  *  *  I  E  G  T  Q  E  N  H  F  G  *  R  K  R  N  G  Q  A  Y  T  G  F  K  T  A  E  R  E   : G  F  R  T  S  K  *  N  R  E  C  R  W  R  A  I  E  K  S  E  G  K  G  Y  *  N  T  I   : *  Y  *  *  K  E  H  R  D  Q  P  S  *  G  S  D  *  N  R  T  E  N  D  *  K  T  D  K  G  D  *  G  I  K  Q  R  E  G  K  S  S  C  *  E  G  E  V  T  F  H  L  Q  R  G  R  T  E  S  F  Y  C  S  R  G  L  *  K  D  T  G   : A  H  *  S  A  Q  R  Y  S  D  *  C  *  K  *  I  *  K  F  E  E  D  Y  G  *  D  A  V  I  R   : G  R  C  *  I  Q  V  T  R  Y  E  E  G  L  *  R  F  G  T  Q  R  E  R  I  Q  E  K  T  R  *  F  A  Y  C  F  V  E  A  Y  *  A  :  N  S  K  R  L  G  G  P  G  K  A  S  G  N  S  K  *  C  Y  S  W  S  N  L  *  S  *  D  S  S  *  D  S  F  T  S  R  V  S  T  Q  R  D  E  P  K  S  *  L  D  F  *  :  V   </second_frame>
            <third_frame>   K  S  Q  C  D  D  L  K  K  Q  L  D  S  L  R  S  A  S  E  P  S  K  D  E  V  N  R  L  K  E  L  K  K  I  I  S  A  E  E  K  E  M  D  R  L  T  Q  G  S  K  Q  L  K  E  K  :  A  S  E  L  Q  N  K  I  E  N  A  G  G  E  Q  L  K  N  Q  K  A  K  V  T  K  I  Q  S  :  D  I  D  K  K  S  T  E  I  N  R  R  K  V  Q  I  E  T  G  Q  K  M  I  K  K  L  T  K  G  I  E  E  S  N  K  E  K  E  N  L  L  A  E  K  E  K  L  L  S  I  F  K  E  V  E  Q  K  A  F  T  V  Q  E  D  Y  K  K  I  Q  E  :  L  I  D  Q  H  K  G  I  L  I  D  A  K  N  E  Y  E  N  L  K  K  T  M  D  E  M  R  S  S  E  :  V  D  A  E  Y  K  L  Q  D  M  K  K  V  Y  K  D  L  E  L  K  G  K  G  Y  K  K  K  L  D  D  L  H  T  A  L  S  K  H  I  E  Q :   I  Q  K  D  L  V  D  P  E  K  L  Q  A  T  L  S  D  V  T  L  G  Q  T  C  D  L  K  T  A  L  E  T  V  S  L  L  E  S  Q  L  K  E  M  N  P  N  L  D  S  I  S  E :   Y  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0054K23.1" strand="+"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="2524" stop="2688"/>
                    <exon start="2798" stop="2881"/>
                    <exon start="2959" stop="3168"/>
                    <exon start="3284" stop="3373"/>
                    <exon start="3447" stop="3568"/>
                    <exon start="3714" stop="3869"/>
                    <exon start="3956" stop="3959"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>831</number_coding_nucleotides>
                  <number_encoded_amino_acids>277</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KSQCDDLKKQLDSLRSASEPSKDEVNRLKELKKIISAEEKEMDRLTQGSKQLKEKASELQNKIENAGGEQLKNQKAKVTKIQSDIDKKSTEINRRKVQIETGQKMIKKLTKGIEESNKEKENLLAEKEKLLSIFKEVEQKAFTVQEDYKKIQELIDQHKGILIDAKNEYENLKKTMDEMRSSEVDAEYKLQDMKKVYKDLELKGKGYKKKLDDLHTALSKHIEQIQKDLVDPEKLQATLSDVTLGQTCDLKTALETVSLLESQLKEMNPNLDSISEY</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="+" PGL_start="3963" PGL_stop="5955"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="3963" e_stop="4063"/>
            <exon e_start="4131" e_stop="4191"/>
            <exon e_start="4975" e_stop="5109"/>
            <exon e_start="5198" e_stop="5285"/>
            <exon e_start="5377" e_stop="5449"/>
            <exon e_start="5533" e_stop="5955"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.988" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.973" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.992" acc_prob="0.983" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.994" e_score="1.000"/>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="3963" e_stop="4063" e_length="101"/>
          </exon>
          <intron i_serial="1" don_prob="0.988" acc_prob="0.000">
            <gDNA_intron_boundary i_start="4064" i_stop="4130" i_length="67"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="4131" e_stop="4191" e_length="61"/>
          </exon>
          <intron i_serial="2" don_prob="0.973" acc_prob="0.998">
            <gDNA_intron_boundary i_start="4192" i_stop="4974" i_length="783"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="4975" e_stop="5109" e_length="135"/>
          </exon>
          <intron i_serial="3" don_prob="0.995" acc_prob="0.000">
            <gDNA_intron_boundary i_start="5110" i_stop="5197" i_length="88"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="5198" e_stop="5285" e_length="88"/>
          </exon>
          <intron i_serial="4" don_prob="0.992" acc_prob="0.983">
            <gDNA_intron_boundary i_start="5286" i_stop="5376" i_length="91"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="5377" e_stop="5449" e_length="73"/>
          </exon>
          <intron i_serial="5" don_prob="0.000" acc_prob="0.994">
            <gDNA_intron_boundary i_start="5450" i_stop="5532" i_length="83"/>
          </intron>
          <exon e_serial="6" e_score="0.998">
            <gDNA_exon_boundary e_start="5533" e_stop="5955" e_length="423"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="3963" stop="4063"/>
              <exon start="4131" stop="4191"/>
              <exon start="4975" stop="5109"/>
              <exon start="5198" stop="5285"/>
              <exon start="5377" stop="5449"/>
              <exon start="5533" stop="5856"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E344195" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="4030" stop="4063"/>
              <exon start="4131" stop="4191"/>
              <exon start="4975" stop="5109"/>
              <exon start="5198" stop="5285"/>
              <exon start="5377" stop="5449"/>
              <exon start="5533" stop="5955"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E357847" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="4044" stop="4063"/>
              <exon start="4131" stop="4191"/>
              <exon start="4975" stop="5109"/>
              <exon start="5198" stop="5285"/>
              <exon start="5377" stop="5449"/>
              <exon start="5533" stop="5836"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E433390" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAAAAAGTATCTGTGTACAATGAAAGAGTTCAAGAGCTTAATTCTGTTACTTTAGAGCGTGATGATATTAAAAAACAATATGATGAGTGGAGAAAGAGAAG : GTTGGATGAGTTCATGGAGGGCTTTAATACCATATCTTTGAAACTTAAAGAAATGTATCAG : ATGATCACCCTTGGAGGCGACGCAGAACTGGAATTGGTGGATTCTCTTGATCCGTTTTCTGAAGGTGTTGTTTTCAGTGTTAGACCTCCAAAGAAGAGCTGGAAGAATATTGCTAACTTATCAGGTGGTGAAAAG : ACCCTCAGCTCATTGGCTCTTGTTTTTGCACTCCACCACTATAAACCCACTCCACTTTATGTGATGGATGAGATTGATGCTGCTTTAG : ATTTTAAGAATGTCTCGATCGTTGGGCATTATGTGAAGGACAGAACTAAAGATGCACAGTTCATAATCATAAG : CCTTAGAAACAATATGTTTGAGCTAGCAGATCGGCTAGTTGGTATCTACAAAACAGATAACTGCACCAAGAGCATTACTATCAATCCTGGAAGCTTTGTAGTTTCTCAAAAAGCTGCTTGAGGCTGTTCCAGAATTTCTGATCACTTTCTTTTATCTTCCCTGTGCTGACAAGAATCTGGTTGATTAACACCTTAAGCTAACATGGTGAGTTCTGTATTTTGTTGGAAGTCATTGTAATATGTATAGTTCATCTAATGAGTTACGGAATACTTACAGATATGATAAATGAAAGTTTGTGTTTGTAGTTAATGGCTACTTTCTATTAGAATATATTTTTAAACACATTGGGGACAGTCAAAATTTTGATGTTGCACAACACTAATGGGAGTATTTCTGAGTGTCACGATTTCAATTTTACTTGA</gDNA_template>
            <first_frame> K  K  V  S  V  Y  N  E  R  V  Q  E  L  N  S  V  T  L  E  R  D  D  I  K  K  Q  Y  D  E  W  R  K  R  R :   L  D  E  F  M  E  G  F  N  T  I  S  L  K  L  K  E  M  Y  Q  :  M  I  T  L  G  G  D  A  E  L  E  L  V  D  S  L  D  P  F  S  E  G  V  V  F  S  V  R  P  P  K  K  S  W  K  N  I  A  N  L  S  G  G  E  K  :  T  L  S  S  L  A  L  V  F  A  L  H  H  Y  K  P  T  P  L  Y  V  M  D  E  I  D  A  A  L   : D  F  K  N  V  S  I  V  G  H  Y  V  K  D  R  T  K  D  A  Q  F  I  I  I  S :   L  R  N  N  M  F  E  L  A  D  R  L  V  G  I  Y  K  T  D  N  C  T  K  S  I  T  I  N  P  G  S  F  V  V  S  Q  K  A  A  *  G  C  S  R  I  S  D  H  F  L  L  S  S  L  C  *  Q  E  S  G  *  L  T  P  *  A  N  M  V  S  S  V  F  C  W  K  S  L  *  Y  V  *  F  I  *  *  V  T  E  Y  L  Q  I  *  *  M  K  V  C  V  C  S  *  W  L  L  S  I  R  I  Y  F  *  T  H  W  G  Q  S  K  F  *  C  C  T  T  L  M  G  V  F  L  S  V  T  I  S  I  L  L   </first_frame>
            <second_frame>  K  K  Y  L  C  T  M  K  E  F  K  S  L  I  L  L  L  *  S  V  M  I  L  K  N  N  M  M  S  G  E  R  E   : G  W  M  S  S  W  R  A  L  I  P  Y  L  *  N  L  K  K  C  I  R :   *  S  P  L  E  A  T  Q  N  W  N  W  W  I  L  L  I  R  F  L  K  V  L  F  S  V  L  D  L  Q  R  R  A  G  R  I  L  L  T  Y  Q  V  V  K  R :   P  S  A  H  W  L  L  F  L  H  S  T  T  I  N  P  L  H  F  M  *  W  M  R  L  M  L  L  *  :  I  L  R  M  S  R  S  L  G  I  M  *  R  T  E  L  K  M  H  S  S  *  S  *   : A  L  E  T  I  C  L  S  *  Q  I  G  *  L  V  S  T  K  Q  I  T  A  P  R  A  L  L  S  I  L  E  A  L  *  F  L  K  K  L  L  E  A  V  P  E  F  L  I  T  F  F  Y  L  P  C  A  D  K  N  L  V  D  *  H  L  K  L  T  W  *  V  L  Y  F  V  G  S  H  C  N  M  Y  S  S  S  N  E  L  R  N  T  Y  R  Y  D  K  *  K  F  V  F  V  V  N  G  Y  F  L  L  E  Y  I  F  K  H  I  G  D  S  Q  N  F  D  V  A  Q  H  *  W  E  Y  F  *  V  S  R  F  Q  F  Y  L  </second_frame>
            <third_frame>   K  S  I  C  V  Q  *  K  S  S  R  A  *  F  C  Y  F  R  A  *  *  Y  *  K  T  I  *  *  V  E  K  E  K  :  V  G  *  V  H  G  G  L  *  Y  H  I  F  E  T  *  R  N  V  S   : D  D  H  P  W  R  R  R  R  T  G  I  G  G  F  S  *  S  V  F  *  R  C  C  F  Q  C  *  T  S  K  E  E  L  E  E  Y  C  *  L  I  R  W  *  K   : D  P  Q  L  I  G  S  C  F  C  T  P  P  L  *  T  H  S  T  L  C  D  G  *  D  *  C  C  F  R :   F  *  E  C  L  D  R  W  A  L  C  E  G  Q  N  *  R  C  T  V  H  N  H  K  :  P  *  K  Q  Y  V  *  A  S  R  S  A  S  W  Y  L  Q  N  R  *  L  H  Q  E  H  Y  Y  Q  S  W  K  L  C  S  F  S  K  S  C  L  R  L  F  Q  N  F  *  S  L  S  F  I  F  P  V  L  T  R  I  W  L  I  N  T  L  S  *  H  G  E  F  C  I  L  L  E  V  I  V  I  C  I  V  H  L  M  S  Y  G  I  L  T  D  M  I  N  E  S  L  C  L  *  L  M  A  T  F  Y  *  N  I  F  L  N  T  L  G  T  V  K  I  L  M  L  H  N  T  N  G  S  I  S  E  C  H  D  F  N  F  T  * </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0054K23.1" strand="+"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="3963" stop="4063"/>
                    <exon start="4131" stop="4191"/>
                    <exon start="4975" stop="5109"/>
                    <exon start="5198" stop="5285"/>
                    <exon start="5377" stop="5449"/>
                    <exon start="5533" stop="5653"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>576</number_coding_nucleotides>
                  <number_encoded_amino_acids>192</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KKVSVYNERVQELNSVTLERDDIKKQYDEWRKRRLDEFMEGFNTISLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFVVSQKAA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="+" PGL_start="8305" PGL_stop="13517"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="8305" e_stop="8396"/>
            <exon e_start="8730" e_stop="9122"/>
            <exon e_start="10169" e_stop="10374"/>
            <exon e_start="10494" e_stop="10922"/>
            <exon e_start="13376" e_stop="13400"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.865" acc_prob="0.735" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.873" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.974" e_score="0.993"/>
          <exon-only e_score="0.480"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="8305" e_stop="8396" e_length="92"/>
          </exon>
          <intron i_serial="1" don_prob="0.865" acc_prob="0.735">
            <gDNA_intron_boundary i_start="8397" i_stop="8729" i_length="333"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="8730" e_stop="9122" e_length="393"/>
          </exon>
          <intron i_serial="2" don_prob="0.998" acc_prob="0.998">
            <gDNA_intron_boundary i_start="9123" i_stop="10168" i_length="1046"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="10169" e_stop="10374" e_length="206"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="0.873">
            <gDNA_intron_boundary i_start="10375" i_stop="10493" i_length="119"/>
          </intron>
          <exon e_serial="4" e_score="0.993">
            <gDNA_exon_boundary e_start="10494" e_stop="10922" e_length="429"/>
          </exon>
          <intron i_serial="4" don_prob="0.000" acc_prob="0.974">
            <gDNA_intron_boundary i_start="10923" i_stop="13375" i_length="2453"/>
          </intron>
          <exon e_serial="5" e_score="0.480">
            <gDNA_exon_boundary e_start="13376" e_stop="13400" e_length="25"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="8305" stop="8396"/>
              <exon start="8730" stop="9122"/>
              <exon start="10169" stop="10374"/>
              <exon start="10494" stop="10539"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E544664" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="8306" stop="8396"/>
              <exon start="8730" stop="9122"/>
              <exon start="10169" stop="10208"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E305900" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="9035" stop="9122"/>
              <exon start="10169" stop="10374"/>
              <exon start="10494" stop="10922"/>
              <exon start="13376" stop="13400"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E544663" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGCAGAGGAAGAAGTAGATTTGTTATACAAGAAGTATGCTGAAAGAATGAGCTGGTTTGATGTTCTCAATCATGAAAGGCTATGTGCCTTAA : ATGCAGTATTGAGGAAGCACTTGTCAAGTCCAAATTCATTTGAGTATGAAATGGAGCCTACAGTTGGTTTGCCTGTCCAATATAGTTCATTGAACAAAATGGATAGAAAAAGACTTGTGAGGAACTTAGAGAGTGATTTGGAGTTGGTTTATGTGGCACAATCATGTTTATCATGGGAAGCACTTCATCATCAGTATAAAAAAGTAAAGGCTCTTTGTGGTTCAACTTCAAAAAATGGGGTCTTTTATGGTAATGTAGCAGCAAGATTTCAGAAATTCCAAGTATTGCTAGAAAGATTTGTGGAAGATGATAGCTGTGGAGGCAAAAGGCATTTGAATTATGTTCATACAAGATTTTCCCAAAAGAATCTCCTCCAAGTTCCAGAGATTTCTG : GATACGTAGAATCAAATGAAAGAGTGGATGGAGAAATAATGAAGCCAATAGAAGTGCTAAAGGCCATTGAGAAATGCATATATGCTTTTTGGTTTTATGTAAGAAGAGATTGCAAGAAAAAGAAGAATTTTTTGTGGAGTCAATCTCGTGTTGAAGACCCCAGAGACATACTGTTCCTGCCTGACTTGACTAGGAAACTTCAAATG : AAAGAGTTATGGATGAAGGATGTGAAAGGTAAGAGAAAATGTTGGCTTAGAAGAGCAAAAAAGGGTGAACAAGAAGAGTTGAACAAAATAGAGTTAGTGTTGACATTGATAGAGATGAAGCTGGTATCAAGGATTCTCCATATGTCCATTATTTCTACATCTCATTTCAAATGGTGCCAACAAAAGCTAGATAATATAGAGTTCAAAAATGGTCACATTTTAAGGAGCCCAACTATCCTACCGCTGTTTCCATCTTGATTAGATCACATCAAATTTTCTTTTTATTTAGAAAATTAGATTGTATATAGTTAAGCATACTTGTTCTTCTTCTACAAAGAGTGCACGCATGTCATGTAAATCTATTACAATTAGCTTCTTCTTTTGGGATAGCCATATCAATGACAAAAATAAATTTTAGTAATAATTAAT : ATTGCATGAGATACGGCCGGGACCC</gDNA_template>
            <first_frame> C  R  G  R  S  R  F  V  I  Q  E  V  C  *  K  N  E  L  V  *  C  S  Q  S  *  K  A  M  C  L  K :   C  S  I  E  E  A  L  V  K  S  K  F  I  *  V  *  N  G  A  Y  S  W  F  A  C  P  I  *  F  I  E  Q  N  G  *  K  K  T  C  E  E  L  R  E  *  F  G  V  G  L  C  G  T  I  M  F  I  M  G  S  T  S  S  S  V  *  K  S  K  G  S  L  W  F  N  F  K  K  W  G  L  L  W  *  C  S  S  K  I  S  E  I  P  S  I  A  R  K  I  C  G  R  *  *  L  W  R  Q  K  A  F  E  L  C  S  Y  K  I  F  P  K  E  S  P  P  S  S  R  D  F  W :   I  R  R  I  K  *  K  S  G  W  R  N  N  E  A  N  R  S  A  K  G  H  *  E  M  H  I  C  F  L  V  L  C  K  K  R  L  Q  E  K  E  E  F  F  V  E  S  I  S  C  *  R  P  Q  R  H  T  V  P  A  *  L  D  *  E  T  S  N   : E  R  V  M  D  E  G  C  E  R  *  E  K  M  L  A  *  K  S  K  K  G  *  T  R  R  V  E  Q  N  R  V  S  V  D  I  D  R  D  E  A  G  I  K  D  S  P  Y  V  H  Y  F  Y  I  S  F  Q  M  V  P  T  K  A  R  *  Y  R  V  Q  K  W  S  H  F  K  E  P  N  Y  P  T  A  V  S  I  L  I  R  S  H  Q  I  F  F  L  F  R  K  L  D  C  I  *  L  S  I  L  V  L  L  L  Q  R  V  H  A  C  H  V  N  L  L  Q  L  A  S  S  F  G  I  A  I  S  M  T  K  I  N  F  S  N  N  *   : Y  C  M  R  Y  G  R  D   </first_frame>
            <second_frame>  A  E  E  E  V  D  L  L  Y  K  K  Y  A  E  R  M  S  W  F  D  V  L  N  H  E  R  L  C  A  L   : N  A  V  L  R  K  H  L  S  S  P  N  S  F  E  Y  E  M  E  P  T  V  G  L  P  V  Q  Y  S  S  L  N  K  M  D  R  K  R  L  V  R  N  L  E  S  D  L  E  L  V  Y  V  A  Q  S  C  L  S  W  E  A  L  H  H  Q  Y  K  K  V  K  A  L  C  G  S  T  S  K  N  G  V  F  Y  G  N  V  A  A  R  F  Q  K  F  Q  V  L  L  E  R  F  V  E  D  D  S  C  G  G  K  R  H  L  N  Y  V  H  T  R  F  S  Q  K  N  L  L  Q  V  P  E  I  S   : G  Y  V  E  S  N  E  R  V  D  G  E  I  M  K  P  I  E  V  L  K  A  I  E  K  C  I  Y  A  F  W  F  Y  V  R  R  D  C  K  K  K  K  N  F  L  W  S  Q  S  R  V  E  D  P  R  D  I  L  F  L  P  D  L  T  R  K  L  Q  M  :  K  E  L  W  M  K  D  V  K  G  K  R  K  C  W  L  R  R  A  K  K  G  E  Q  E  E  L  N  K  I  E  L  V  L  T  L  I  E  M  K  L  V  S  R  I  L  H  M  S  I  I  S  T  S  H  F  K  W  C  Q  Q  K  L  D  N  I  E  F  K  N  G  H  I  L  R  S  P  T  I  L  P  L  F  P  S  *  L  D  H  I  K  F  S  F  Y  L  E  N  *  I  V  Y  S  *  A  Y  L  F  F  F  Y  K  E  C  T  H  V  M  *  I  Y  Y  N  *  L  L  L  L  G  *  P  Y  Q  *  Q  K  *  I  L  V  I  I  N  :  I  A  *  D  T  A  G  T  </second_frame>
            <third_frame>   Q  R  K  K  *  I  C  Y  T  R  S  M  L  K  E  *  A  G  L  M  F  S  I  M  K  G  Y  V  P  *  :  M  Q  Y  *  G  S  T  C  Q  V  Q  I  H  L  S  M  K  W  S  L  Q  L  V  C  L  S  N  I  V  H  *  T  K  W  I  E  K  D  L  *  G  T  *  R  V  I  W  S  W  F  M  W  H  N  H  V  Y  H  G  K  H  F  I  I  S  I  K  K  *  R  L  F  V  V  Q  L  Q  K  M  G  S  F  M  V  M  *  Q  Q  D  F  R  N  S  K  Y  C  *  K  D  L  W  K  M  I  A  V  E  A  K  G  I  *  I  M  F  I  Q  D  F  P  K  R  I  S  S  K  F  Q  R  F  L  :  D  T  *  N  Q  M  K  E  W  M  E  K  *  *  S  Q  *  K  C  *  R  P  L  R  N  A  Y  M  L  F  G  F  M  *  E  E  I  A  R  K  R  R  I  F  C  G  V  N  L  V  L  K  T  P  E  T  Y  C  S  C  L  T  *  L  G  N  F  K  * :   K  S  Y  G  *  R  M  *  K  V  R  E  N  V  G  L  E  E  Q  K  R  V  N  K  K  S  *  T  K  *  S  *  C  *  H  *  *  R  *  S  W  Y  Q  G  F  S  I  C  P  L  F  L  H  L  I  S  N  G  A  N  K  S  *  I  I  *  S  S  K  M  V  T  F  *  G  A  Q  L  S  Y  R  C  F  H  L  D  *  I  T  S  N  F  L  F  I  *  K  I  R  L  Y  I  V  K  H  T  C  S  S  S  T  K  S  A  R  M  S  C  K  S  I  T  I  S  F  F  F  W  D  S  H  I  N  D  K  N  K  F  *  *  *  L  I :   L  H  E  I  R  P  G  P </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0054K23.1" strand="+"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="8306" stop="8396"/>
                    <exon start="8730" stop="9122"/>
                    <exon start="10169" stop="10374"/>
                    <exon start="10494" stop="10751"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>945</number_coding_nucleotides>
                  <number_encoded_amino_acids>315</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>AEEEVDLLYKKYAERMSWFDVLNHERLCALNAVLRKHLSSPNSFEYEMEPTVGLPVQYSSLNKMDRKRLVRNLESDLELVYVAQSCLSWEALHHQYKKVKALCGSTSKNGVFYGNVAARFQKFQVLLERFVEDDSCGGKRHLNYVHTRFSQKNLLQVPEISGYVESNERVDGEIMKPIEVLKAIEKCIYAFWFYVRRDCKKKKNFLWSQSRVEDPRDILFLPDLTRKLQMKELWMKDVKGKRKCWLRRAKKGEQEELNKIELVLTLIEMKLVSRILHMSIISTSHFKWCQQKLDNIEFKNGHILRSPTILPLFPS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="13211" e_stop="13517"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.958"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.958">
            <gDNA_exon_boundary e_start="13211" e_stop="13517" e_length="307"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="13211" stop="13517"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E256788" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TAAATAAAAAATAATAAACTTGGTTGTTTATTATTGCTGTCTTCTAGCCTCGCATATTTAAATTAATAAAATAGCCTTAATTGTTTTATACTTGTTATCACTTAGCAAGCATATTAATGAATAATAATGAAGTGACCTTGATTGCTACTTGTAACCCCCACATAGATTGCATGAGATACGGCCGGGACCCACACTTGTGGACCTCGAGGGATGCCTAACACCTTCCCCTCGAGGTAATTTGAACCCTTACCCTAATTCTTTGGCTCGTTGACCTTAGTTAGACTTAGTTAGGTTAGATAGGTGCCCT</gDNA_template>
            <first_frame> *  I  K  N  N  K  L  G  C  L  L  L  L  S  S  S  L  A  Y  L  N  *  *  N  S  L  N  C  F  I  L  V  I  T  *  Q  A  Y  *  *  I  I  M  K  *  P  *  L  L  L  V  T  P  T  *  I  A  *  D  T  A  G  T  H  T  C  G  P  R  G  M  P  N  T  F  P  S  R  *  F  E  P  L  P  *  F  F  G  S  L  T  L  V  R  L  S  *  V  R  *  V  P  </first_frame>
            <second_frame>  K  *  K  I  I  N  L  V  V  Y  Y  C  C  L  L  A  S  H  I  *  I  N  K  I  A  L  I  V  L  Y  L  L  S  L  S  K  H  I  N  E  *  *  *  S  D  L  D  C  Y  L  *  P  P  H  R  L  H  E  I  R  P  G  P  T  L  V  D  L  E  G  C  L  T  P  S  P  R  G  N  L  N  P  Y  P  N  S  L  A  R  *  P  *  L  D  L  V  R  L  D  R  C  P </second_frame>
            <third_frame>   N  K  K  *  *  T  W  L  F  I  I  A  V  F  *  P  R  I  F  K  L  I  K  *  P  *  L  F  Y  T  C  Y  H  L  A  S  I  L  M  N  N  N  E  V  T  L  I  A  T  C  N  P  H  I  D  C  M  R  Y  G  R  D  P  H  L  W  T  S  R  D  A  *  H  L  P  L  E  V  I  *  T  L  T  L  I  L  W  L  V  D  L  S  *  T  *  L  G  *  I  G  A   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0054K23.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="+" PGL_start="15742" PGL_stop="22981"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="15758" e_stop="16260"/>
            <exon e_start="16780" e_stop="17404"/>
            <exon e_start="18076" e_stop="18140"/>
            <exon e_start="18542" e_stop="18619"/>
            <exon e_start="18723" e_stop="18833"/>
            <exon e_start="19277" e_stop="19321"/>
            <exon e_start="19589" e_stop="19762"/>
            <exon e_start="20908" e_stop="22183"/>
            <exon e_start="22956" e_stop="22971"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.863" acc_prob="0.912" e_score="1.000"/>
          <exon-intron don_prob="0.908" acc_prob="0.634" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.761" e_score="1.000"/>
          <exon-intron don_prob="0.989" acc_prob="0.855" e_score="1.000"/>
          <exon-intron don_prob="0.913" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.958" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.992" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.666" e_score="0.994"/>
          <exon-only e_score="0.688"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="15758" e_stop="16260" e_length="503"/>
          </exon>
          <intron i_serial="1" don_prob="0.863" acc_prob="0.912">
            <gDNA_intron_boundary i_start="16261" i_stop="16779" i_length="519"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="16780" e_stop="17404" e_length="625"/>
          </exon>
          <intron i_serial="2" don_prob="0.908" acc_prob="0.634">
            <gDNA_intron_boundary i_start="17405" i_stop="18075" i_length="671"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="18076" e_stop="18140" e_length="65"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="0.761">
            <gDNA_intron_boundary i_start="18141" i_stop="18541" i_length="401"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="18542" e_stop="18619" e_length="78"/>
          </exon>
          <intron i_serial="4" don_prob="0.989" acc_prob="0.855">
            <gDNA_intron_boundary i_start="18620" i_stop="18722" i_length="103"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="18723" e_stop="18833" e_length="111"/>
          </exon>
          <intron i_serial="5" don_prob="0.913" acc_prob="0.995">
            <gDNA_intron_boundary i_start="18834" i_stop="19276" i_length="443"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="19277" e_stop="19321" e_length="45"/>
          </exon>
          <intron i_serial="6" don_prob="0.958" acc_prob="0.991">
            <gDNA_intron_boundary i_start="19322" i_stop="19588" i_length="267"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="19589" e_stop="19762" e_length="174"/>
          </exon>
          <intron i_serial="7" don_prob="0.992" acc_prob="0.993">
            <gDNA_intron_boundary i_start="19763" i_stop="20907" i_length="1145"/>
          </intron>
          <exon e_serial="8" e_score="0.994">
            <gDNA_exon_boundary e_start="20908" e_stop="22183" e_length="1276"/>
          </exon>
          <intron i_serial="8" don_prob="0.000" acc_prob="0.666">
            <gDNA_intron_boundary i_start="22184" i_stop="22955" i_length="772"/>
          </intron>
          <exon e_serial="9" e_score="0.688">
            <gDNA_exon_boundary e_start="22956" e_stop="22971" e_length="16"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15758" stop="16260"/>
              <exon start="16780" stop="17057"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E553519" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15764" stop="16260"/>
              <exon start="16780" stop="16847"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E325335" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15778" stop="16260"/>
              <exon start="16780" stop="16969"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E316455" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15902" stop="16260"/>
              <exon start="16780" stop="16957"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E469003" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15916" stop="16260"/>
              <exon start="16780" stop="17290"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E738693" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15925" stop="16260"/>
              <exon start="16780" stop="17109"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E441729" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15925" stop="16260"/>
              <exon start="16780" stop="17090"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E482775" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15925" stop="16260"/>
              <exon start="16780" stop="17042"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E484850" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15925" stop="16260"/>
              <exon start="16780" stop="16954"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E419351" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15925" stop="16260"/>
              <exon start="16780" stop="16954"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E441730" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16004" stop="16260"/>
              <exon start="16780" stop="17003"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E487327" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17053" stop="17404"/>
              <exon start="18076" stop="18140"/>
              <exon start="18542" stop="18561"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E446922" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17189" stop="17404"/>
              <exon start="18076" stop="18140"/>
              <exon start="18542" stop="18619"/>
              <exon start="18723" stop="18833"/>
              <exon start="19277" stop="19321"/>
              <exon start="19589" stop="19762"/>
              <exon start="20908" stop="21051"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E703399" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17288" stop="17404"/>
              <exon start="18076" stop="18140"/>
              <exon start="18542" stop="18619"/>
              <exon start="18723" stop="18833"/>
              <exon start="19277" stop="19321"/>
              <exon start="19589" stop="19762"/>
              <exon start="20908" stop="21023"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E379910" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17288" stop="17404"/>
              <exon start="18076" stop="18140"/>
              <exon start="18542" stop="18619"/>
              <exon start="18723" stop="18833"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E200074" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19608" stop="19762"/>
              <exon start="20908" stop="21152"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E406736" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20908" stop="21466"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E564795" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21050" stop="21541"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E318941" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21182" stop="21895"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E589586" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21214" stop="21878"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E333060" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21214" stop="21745"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E334644" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21214" stop="21739"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E333394" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21355" stop="21917"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E328810" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21425" stop="22118"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E379790" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21484" stop="22070"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E589890" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21575" stop="22065"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E419352" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21597" stop="21933"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E242138" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21799" stop="22183"/>
              <exon start="22956" stop="22971"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E230032" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21947" stop="22183"/>
              <exon start="22956" stop="22971"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E230105" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTGAATCTAATCCTCACAGGGATCCCTTCTTCGGGGACCCATTTTGCATCAAACGATTTCAACATTGACCTCCATTGTCGTTACTTGTTGGTTTTTCTTTTCACAATCGAATACCCCTAATTCTCTGTACTAGTCTCTATTCAATTGGGTTTTCTATACTTGTCAACTGGGTCGTCTTCTATTTCCACTAGGTCACTCTGGTTCTTGAAATCTTGGGTTCCTGTTATCCCTGTGAACTTCATCTTTCTGTAATGGAAAATTCCATTGTTCTTCATACTGGAAATCAATTCCACCCCAGCTTACCCTTTTTCTCATTTAGGCCCAAAAAGTTATCTCGAATTCATGGCTCCAGTAGAGAGCAAATGTGGAGGATCAAGCGCGTTAAAGCAACAGGTGAAAATTCTGGGGAAGCTGCAAGTGCTGATGAATCGGATGATGCCTTACAGGTTACAATTGAAAAGAGCAAAAAGGTTTTAGCCATGCAACAGGACCTACTTCAACAG : ATTGCAGAAAGAAGAAAAGTAGTCTCTTCAATAAAAAGCAGTCTTGCCGATGCTACTGGTACTTATGATGGTGGGAGTGGTAGCTTATCAGATGTTGATATCCCTGACGTGGATAAAGATTATAATGTTACTGTACCTAGTACTGCTGCTACTCCAATTACTGATGTCGATAAAAATACACCGCCTGCTATAAGCCAAGATTTTGTTGAAAGTAAAAGAGAAGTCAAAAGGGACCTGGCCGATGAAAGGGCACCCCCACTTTCAAGATCATCCATCACAGCCAGTAGCCAGACTTCCTCTACTGTAAGTTCCAAAAGAATATTGAATGTCCCTCCAGAAACTCCGAAGTTCAGTCAAGAGACACTTTTGAATGTGAATTCGCGTAAAAGTTTAGTCGATGTTCCTGGAAAGAAGATCCAGTCTTATATGCCTTCATTATGTAAAGAATCCTCAGCACAATCCCTTGTGGAAAAGAGGAATGAAAATCTTGAAGGATCAAGTGCTGAGGCAAACGAAGAGACTGAAGATCTTGTGAATATAGATGAGAAACCTCCTCCATTGGCCGGAACAAATGTTATGAACATTATTTTGGTGGCTTCAGAATGCGCTCCATGGTCTAAAACAG : GTGGGCTTGGAGATGTTGCTGGAGCATTACCGAAAGCTTTGGCTCGACGTGGCCACAGAGTTATG : GTTGTGGCACCTCGTTATGACAACTATCCTGAACCTCAAGATTCTGGTGTAAGAAAAATTTATAAAGTTCATGGTCAG : GATGTAGAAGTGACTTACTTCCAAGCTTTTATTGATGGTGTGGATTTTGTTTTCATTGACAGCCATATGTTTAGACACATTGGGAACAACATTTACGGAGGGAACCGTGTG : GATATTTTAAAGCGCATGGTTTTATTTTGCAAAGCAGCGATTGAG : GTTCCTTGGCATGTTCCATGTGGTGGGGTCTGCTATGGAGATGGAAACTTAGTGTTCATTGCTAATGATTGGCATACTGCTTTATTGCCAGTATATCTGAAAGCTTATTATCGTGACAATGGAATTATGAACTATACAAGATCTGTCCTGGTGATTCATAACATCGCTCATCAG : GGTCGTGGTCCTTTGGAGGATTTTTCATATGTAGATCTTCCACCACACTATATGGACCCTTTCAAATTGTATGACCCAGTAGGAGGTGAGCATTTCAACATTTTTGCGGCTGGTCTAAAGACAGCAGATCGTGTAGTTACAGTTAGTCATGGATATTCATGGGAACTCAAGACTTCCGAAGGTGGTTGGGGATTGCATCAGATAATTAATGAGAACGATTGGAAATTACGGGGTATTGTGAATGGGATTGATACAAAAGAGTGGAACCCTGAGTTGGACGTTCACTTACAGTCAGATGGTTACGTGAACTACTCCTTGGACACACTGCAGACTGGCAAGCCTCAATGTAAAGCTGCATTGCAGAAGGAACTTGGTTTACCAGTTCGTGATGATGTCCCACTGATTGGTTTCATTGGGAGGCTTGACCCACAAAAGGGTGTTGATCTGATTGCTGAGGCAGTGCCTTGGATGATGGGTCAGGATGTACAACTGGTCATGTTGGGTACGGGGAGGCCTGACCTTGAACAGATGCTAAGGCAATTTGAGTGTCAACACAATGATAAAATTAGAGGATGGGTTGGTTTCTCTGTGAAGACTTCTCATCGTATAACTGCTGGTGCAGACATTCTGCTCATGCCTTCTAGATTTGAGCCTTGTGGACTGAACCAGCTTTATGCAATGACATATGGGACTATTCCTGTTGTTCATGCAGTAGGAGGACTCAGAGATACTGTGCAGCCCTTTGATCCTTTTAATGAGTCAGGACTGGGGTGGACCTTCAGTAGGGCTGAAGCTAACCAGCTGATCCACGCATTAGGAAATTGCTTGCTGACTTATCGTGAGTACAAAAAGAGTTGGGAGGGGATTCAGACGCGTTGTATGACACAAGACTTAAGTTGGGATAATGCTGCTCAGAACTATGAAGAAGTTCTCATTGCTGCTAAGTATCAGTGGTGAGGTTCATTACTTGTAGATATTTGGGGGTTTTATCAAGTTCCAATGATGGCATTTCAGAGACATGTTACTGGTATCGCCACGAGAGGATGCAACAAGTTGGTTAACTATCATACTACTACCACGTCAGGAATGATTGCCGCGCTTGATCATATAATCATGTATATACTCTATTTTGTTAGCAAAATGTAGTTACATGTTGCAATTTCTACTCTATATTTTTTGGAAGTTTTAGTTGTCAAATAATCAGCCACCTCAATTTTTGTTTAGATGTATTCTCTCTCAATAATAAAATTGACCGACTCATCTAAACCACAATCAA : ACAAATCAAAAAAGGA</gDNA_template>
            <first_frame> V  N  L  I  L  T  G  I  P  S  S  G  T  H  F  A  S  N  D  F  N  I  D  L  H  C  R  Y  L  L  V  F  L  F  T  I  E  Y  P  *  F  S  V  L  V  S  I  Q  L  G  F  L  Y  L  S  T  G  S  S  S  I  S  T  R  S  L  W  F  L  K  S  W  V  P  V  I  P  V  N  F  I  F  L  *  W  K  I  P  L  F  F  I  L  E  I  N  S  T  P  A  Y  P  F  S  H  L  G  P  K  S  Y  L  E  F  M  A  P  V  E  S  K  C  G  G  S  S  A  L  K  Q  Q  V  K  I  L  G  K  L  Q  V  L  M  N  R  M  M  P  Y  R  L  Q  L  K  R  A  K  R  F  *  P  C  N  R  T  Y  F  N  R :   L  Q  K  E  E  K  *  S  L  Q  *  K  A  V  L  P  M  L  L  V  L  M  M  V  G  V  V  A  Y  Q  M  L  I  S  L  T  W  I  K  I  I  M  L  L  Y  L  V  L  L  L  L  Q  L  L  M  S  I  K  I  H  R  L  L  *  A  K  I  L  L  K  V  K  E  K  S  K  G  T  W  P  M  K  G  H  P  H  F  Q  D  H  P  S  Q  P  V  A  R  L  P  L  L  *  V  P  K  E  Y  *  M  S  L  Q  K  L  R  S  S  V  K  R  H  F  *  M  *  I  R  V  K  V  *  S  M  F  L  E  R  R  S  S  L  I  C  L  H  Y  V  K  N  P  Q  H  N  P  L  W  K  R  G  M  K  I  L  K  D  Q  V  L  R  Q  T  K  R  L  K  I  L  *  I  *  M  R  N  L  L  H  W  P  E  Q  M  L  *  T  L  F  W  W  L  Q  N  A  L  H  G  L  K  Q  :  V  G  L  E  M  L  L  E  H  Y  R  K  L  W  L  D  V  A  T  E  L  W :   L  W  H  L  V  M  T  T  I  L  N  L  K  I  L  V  *  E  K  F  I  K  F  M  V  R :   M  *  K  *  L  T  S  K  L  L  L  M  V  W  I  L  F  S  L  T  A  I  C  L  D  T  L  G  T  T  F  T  E  G  T  V  W :   I  F  *  S  A  W  F  Y  F  A  K  Q  R  L  R :   F  L  G  M  F  H  V  V  G  S  A  M  E  M  E  T  *  C  S  L  L  M  I  G  I  L  L  Y  C  Q  Y  I  *  K  L  I  I  V  T  M  E  L  *  T  I  Q  D  L  S  W  *  F  I  T  S  L  I  R :   V  V  V  L  W  R  I  F  H  M  *  I  F  H  H  T  I  W  T  L  S  N  C  M  T  Q  *  E  V  S  I  S  T  F  L  R  L  V  *  R  Q  Q  I  V  *  L  Q  L  V  M  D  I  H  G  N  S  R  L  P  K  V  V  G  D  C  I  R  *  L  M  R  T  I  G  N  Y  G  V  L  *  M  G  L  I  Q  K  S  G  T  L  S  W  T  F  T  Y  S  Q  M  V  T  *  T  T  P  W  T  H  C  R  L  A  S  L  N  V  K  L  H  C  R  R  N  L  V  Y  Q  F  V  M  M  S  H  *  L  V  S  L  G  G  L  T  H  K  R  V  L  I  *  L  L  R  Q  C  L  G  *  W  V  R  M  Y  N  W  S  C  W  V  R  G  G  L  T  L  N  R  C  *  G  N  L  S  V  N  T  M  I  K  L  E  D  G  L  V  S  L  *  R  L  L  I  V  *  L  L  V  Q  T  F  C  S  C  L  L  D  L  S  L  V  D  *  T  S  F  M  Q  *  H  M  G  L  F  L  L  F  M  Q  *  E  D  S  E  I  L  C  S  P  L  I  L  L  M  S  Q  D  W  G  G  P  S  V  G  L  K  L  T  S  *  S  T  H  *  E  I  A  C  *  L  I  V  S  T  K  R  V  G  R  G  F  R  R  V  V  *  H  K  T  *  V  G  I  M  L  L  R  T  M  K  K  F  S  L  L  L  S  I  S  G  E  V  H  Y  L  *  I  F  G  G  F  I  K  F  Q  *  W  H  F  R  D  M  L  L  V  S  P  R  E  D  A  T  S  W  L  T  I  I  L  L  P  R  Q  E  *  L  P  R  L  I  I  *  S  C  I  Y  S  I  L  L  A  K  C  S  Y  M  L  Q  F  L  L  Y  I  F  W  K  F  *  L  S  N  N  Q  P  P  Q  F  L  F  R  C  I  L  S  Q  *  *  N  *  P  T  H  L  N  H  N  Q  :  T  N  Q  K  R  </first_frame>
            <second_frame>  *  I  *  S  S  Q  G  S  L  L  R  G  P  I  L  H  Q  T  I  S  T  L  T  S  I  V  V  T  C  W  F  F  F  S  Q  S  N  T  P  N  S  L  Y  *  S  L  F  N  W  V  F  Y  T  C  Q  L  G  R  L  L  F  P  L  G  H  S  G  S  *  N  L  G  F  L  L  S  L  *  T  S  S  F  C  N  G  K  F  H  C  S  S  Y  W  K  S  I  P  P  Q  L  T  L  F  L  I  *  A  Q  K  V  I  S  N  S  W  L  Q  *  R  A  N  V  E  D  Q  A  R  *  S  N  R  *  K  F  W  G  S  C  K  C  *  *  I  G  *  C  L  T  G  Y  N  *  K  E  Q  K  G  F  S  H  A  T  G  P  T  S  T   : D  C  R  K  K  K  S  S  L  F  N  K  K  Q  S  C  R  C  Y  W  Y  L  *  W  W  E  W  *  L  I  R  C  *  Y  P  *  R  G  *  R  L  *  C  Y  C  T  *  Y  C  C  Y  S  N  Y  *  C  R  *  K  Y  T  A  C  Y  K  P  R  F  C  *  K  *  K  R  S  Q  K  G  P  G  R  *  K  G  T  P  T  F  K  I  I  H  H  S  Q  *  P  D  F  L  Y  C  K  F  Q  K  N  I  E  C  P  S  R  N  S  E  V  Q  S  R  D  T  F  E  C  E  F  A  *  K  F  S  R  C  S  W  K  E  D  P  V  L  Y  A  F  I  M  *  R  I  L  S  T  I  P  C  G  K  E  E  *  K  S  *  R  I  K  C  *  G  K  R  R  D  *  R  S  C  E  Y  R  *  E  T  S  S  I  G  R  N  K  C  Y  E  H  Y  F  G  G  F  R  M  R  S  M  V  *  N  R :   W  A  W  R  C  C  W  S  I  T  E  S  F  G  S  T  W  P  Q  S  Y   : G  C  G  T  S  L  *  Q  L  S  *  T  S  R  F  W  C  K  K  N  L  *  S  S  W  S   : G  C  R  S  D  L  L  P  S  F  Y  *  W  C  G  F  C  F  H  *  Q  P  Y  V  *  T  H  W  E  Q  H  L  R  R  E  P  C   : G  Y  F  K  A  H  G  F  I  L  Q  S  S  D  *   : G  S  L  A  C  S  M  W  W  G  L  L  W  R  W  K  L  S  V  H  C  *  *  L  A  Y  C  F  I  A  S  I  S  E  S  L  L  S  *  Q  W  N  Y  E  L  Y  K  I  C  P  G  D  S  *  H  R  S  S   : G  S  W  S  F  G  G  F  F  I  C  R  S  S  T  T  L  Y  G  P  F  Q  I  V  *  P  S  R  R  *  A  F  Q  H  F  C  G  W  S  K  D  S  R  S  C  S  Y  S  *  S  W  I  F  M  G  T  Q  D  F  R  R  W  L  G  I  A  S  D  N  *  *  E  R  L  E  I  T  G  Y  C  E  W  D  *  Y  K  R  V  E  P  *  V  G  R  S  L  T  V  R  W  L  R  E  L  L  L  G  H  T  A  D  W  Q  A  S  M  *  S  C  I  A  E  G  T  W  F  T  S  S  *  *  C  P  T  D  W  F  H  W  E  A  *  P  T  K  G  C  *  S  D  C  *  G  S  A  L  D  D  G  S  G  C  T  T  G  H  V  G  Y  G  E  A  *  P  *  T  D  A  K  A  I  *  V  S  T  Q  *  *  N  *  R  M  G  W  F  L  C  E  D  F  S  S  Y  N  C  W  C  R  H  S  A  H  A  F  *  I  *  A  L  W  T  E  P  A  L  C  N  D  I  W  D  Y  S  C  C  S  C  S  R  R  T  Q  R  Y  C  A  A  L  *  S  F  *  *  V  R  T  G  V  D  L  Q  *  G  *  S  *  P  A  D  P  R  I  R  K  L  L  A  D  L  S  *  V  Q  K  E  L  G  G  D  S  D  A  L  Y  D  T  R  L  K  L  G  *  C  C  S  E  L  *  R  S  S  H  C  C  *  V  S  V  V  R  F  I  T  C  R  Y  L  G  V  L  S  S  S  N  D  G  I  S  E  T  C  Y  W  Y  R  H  E  R  M  Q  Q  V  G  *  L  S  Y  Y  Y  H  V  R  N  D  C  R  A  *  S  Y  N  H  V  Y  T  L  F  C  *  Q  N  V  V  T  C  C  N  F  Y  S  I  F  F  G  S  F  S  C  Q  I  I  S  H  L  N  F  C  L  D  V  F  S  L  N  N  K  I  D  R  L  I  *  T  T  I  K :   Q  I  K  K  G </second_frame>
            <third_frame>   E  S  N  P  H  R  D  P  F  F  G  D  P  F  C  I  K  R  F  Q  H  *  P  P  L  S  L  L  V  G  F  S  F  H  N  R  I  P  L  I  L  C  T  S  L  Y  S  I  G  F  S  I  L  V  N  W  V  V  F  Y  F  H  *  V  T  L  V  L  E  I  L  G  S  C  Y  P  C  E  L  H  L  S  V  M  E  N  S  I  V  L  H  T  G  N  Q  F  H  P  S  L  P  F  F  S  F  R  P  K  K  L  S  R  I  H  G  S  S  R  E  Q  M  W  R  I  K  R  V  K  A  T  G  E  N  S  G  E  A  A  S  A  D  E  S  D  D  A  L  Q  V  T  I  E  K  S  K  K  V  L  A  M  Q  Q  D  L  L  Q  Q  :  I  A  E  R  R  K  V  V  S  S  I  K  S  S  L  A  D  A  T  G  T  Y  D  G  G  S  G  S  L  S  D  V  D  I  P  D  V  D  K  D  Y  N  V  T  V  P  S  T  A  A  T  P  I  T  D  V  D  K  N  T  P  P  A  I  S  Q  D  F  V  E  S  K  R  E  V  K  R  D  L  A  D  E  R  A  P  P  L  S  R  S  S  I  T  A  S  S  Q  T  S  S  T  V  S  S  K  R  I  L  N  V  P  P  E  T  P  K  F  S  Q  E  T  L  L  N  V  N  S  R  K  S  L  V  D  V  P  G  K  K  I  Q  S  Y  M  P  S  L  C  K  E  S  S  A  Q  S  L  V  E  K  R  N  E  N  L  E  G  S  S  A  E  A  N  E  E  T  E  D  L  V  N  I  D  E  K  P  P  P  L  A  G  T  N  V  M  N  I  I  L  V  A  S  E  C  A  P  W  S  K  T   : G  G  L  G  D  V  A  G  A  L  P  K  A  L  A  R  R  G  H  R  V  M  :  V  V  A  P  R  Y  D  N  Y  P  E  P  Q  D  S  G  V  R  K  I  Y  K  V  H  G  Q  :  D  V  E  V  T  Y  F  Q  A  F  I  D  G  V  D  F  V  F  I  D  S  H  M  F  R  H  I  G  N  N  I  Y  G  G  N  R  V  :  D  I  L  K  R  M  V  L  F  C  K  A  A  I  E  :  V  P  W  H  V  P  C  G  G  V  C  Y  G  D  G  N  L  V  F  I  A  N  D  W  H  T  A  L  L  P  V  Y  L  K  A  Y  Y  R  D  N  G  I  M  N  Y  T  R  S  V  L  V  I  H  N  I  A  H  Q  :  G  R  G  P  L  E  D  F  S  Y  V  D  L  P  P  H  Y  M  D  P  F  K  L  Y  D  P  V  G  G  E  H  F  N  I  F  A  A  G  L  K  T  A  D  R  V  V  T  V  S  H  G  Y  S  W  E  L  K  T  S  E  G  G  W  G  L  H  Q  I  I  N  E  N  D  W  K  L  R  G  I  V  N  G  I  D  T  K  E  W  N  P  E  L  D  V  H  L  Q  S  D  G  Y  V  N  Y  S  L  D  T  L  Q  T  G  K  P  Q  C  K  A  A  L  Q  K  E  L  G  L  P  V  R  D  D  V  P  L  I  G  F  I  G  R  L  D  P  Q  K  G  V  D  L  I  A  E  A  V  P  W  M  M  G  Q  D  V  Q  L  V  M  L  G  T  G  R  P  D  L  E  Q  M  L  R  Q  F  E  C  Q  H  N  D  K  I  R  G  W  V  G  F  S  V  K  T  S  H  R  I  T  A  G  A  D  I  L  L  M  P  S  R  F  E  P  C  G  L  N  Q  L  Y  A  M  T  Y  G  T  I  P  V  V  H  A  V  G  G  L  R  D  T  V  Q  P  F  D  P  F  N  E  S  G  L  G  W  T  F  S  R  A  E  A  N  Q  L  I  H  A  L  G  N  C  L  L  T  Y  R  E  Y  K  K  S  W  E  G  I  Q  T  R  C  M  T  Q  D  L  S  W  D  N  A  A  Q  N  Y  E  E  V  L  I  A  A  K  Y  Q  W  *  G  S  L  L  V  D  I  W  G  F  Y  Q  V  P  M  M  A  F  Q  R  H  V  T  G  I  A  T  R  G  C  N  K  L  V  N  Y  H  T  T  T  T  S  G  M  I  A  A  L  D  H  I  I  M  Y  I  L  Y  F  V  S  K  M  *  L  H  V  A  I  S  T  L  Y  F  L  E  V  L  V  V  K  *  S  A  T  S  I  F  V  *  M  Y  S  L  S  I  I  K  L  T  D  S  S  K  P  Q  S   : N  K  S  K  K   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0054K23.1" strand="+"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="15949" stop="16260"/>
                    <exon start="16780" stop="17404"/>
                    <exon start="18076" stop="18140"/>
                    <exon start="18542" stop="18619"/>
                    <exon start="18723" stop="18833"/>
                    <exon start="19277" stop="19321"/>
                    <exon start="19589" stop="19762"/>
                    <exon start="20908" stop="21864"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>2364</number_coding_nucleotides>
                  <number_encoded_amino_acids>788</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VTLVLEILGSCYPCELHLSVMENSIVLHTGNQFHPSLPFFSFRPKKLSRIHGSSREQMWRIKRVKATGENSGEAASADESDDALQVTIEKSKKVLAMQQDLLQQIAERRKVVSSIKSSLADATGTYDGGSGSLSDVDIPDVDKDYNVTVPSTAATPITDVDKNTPPAISQDFVESKREVKRDLADERAPPLSRSSITASSQTSSTVSSKRILNVPPETPKFSQETLLNVNSRKSLVDVPGKKIQSYMPSLCKESSAQSLVEKRNENLEGSSAEANEETEDLVNIDEKPPPLAGTNVMNIILVASECAPWSKTGGLGDVAGALPKALARRGHRVMVVAPRYDNYPEPQDSGVRKIYKVHGQDVEVTYFQAFIDGVDFVFIDSHMFRHIGNNIYGGNRVDILKRMVLFCKAAIEVPWHVPCGGVCYGDGNLVFIANDWHTALLPVYLKAYYRDNGIMNYTRSVLVIHNIAHQGRGPLEDFSYVDLPPHYMDPFKLYDPVGGEHFNIFAAGLKTADRVVTVSHGYSWELKTSEGGWGLHQIINENDWKLRGIVNGIDTKEWNPELDVHLQSDGYVNYSLDTLQTGKPQCKAALQKELGLPVRDDVPLIGFIGRLDPQKGVDLIAEAVPWMMGQDVQLVMLGTGRPDLEQMLRQFECQHNDKIRGWVGFSVKTSHRITAGADILLMPSRFEPCGLNQLYAMTYGTIPVVHAVGGLRDTVQPFDPFNESGLGWTFSRAEANQLIHALGNCLLTYREYKKSWEGIQTRCMTQDLSWDNAAQNYEEVLIAAKYQW*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="15742" e_stop="16260"/>
            <exon e_start="16780" e_stop="17404"/>
            <exon e_start="18076" e_stop="18140"/>
            <exon e_start="18542" e_stop="18619"/>
            <exon e_start="18723" e_stop="18833"/>
            <exon e_start="19277" e_stop="19321"/>
            <exon e_start="19589" e_stop="19762"/>
            <exon e_start="20908" e_stop="22133"/>
            <exon e_start="22956" e_stop="22978"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.863" acc_prob="0.912" e_score="1.000"/>
          <exon-intron don_prob="0.908" acc_prob="0.634" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.761" e_score="1.000"/>
          <exon-intron don_prob="0.989" acc_prob="0.855" e_score="1.000"/>
          <exon-intron don_prob="0.913" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.958" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.992" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.666" e_score="0.998"/>
          <exon-only e_score="0.714"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="15742" e_stop="16260" e_length="519"/>
          </exon>
          <intron i_serial="1" don_prob="0.863" acc_prob="0.912">
            <gDNA_intron_boundary i_start="16261" i_stop="16779" i_length="519"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="16780" e_stop="17404" e_length="625"/>
          </exon>
          <intron i_serial="2" don_prob="0.908" acc_prob="0.634">
            <gDNA_intron_boundary i_start="17405" i_stop="18075" i_length="671"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="18076" e_stop="18140" e_length="65"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="0.761">
            <gDNA_intron_boundary i_start="18141" i_stop="18541" i_length="401"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="18542" e_stop="18619" e_length="78"/>
          </exon>
          <intron i_serial="4" don_prob="0.989" acc_prob="0.855">
            <gDNA_intron_boundary i_start="18620" i_stop="18722" i_length="103"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="18723" e_stop="18833" e_length="111"/>
          </exon>
          <intron i_serial="5" don_prob="0.913" acc_prob="0.995">
            <gDNA_intron_boundary i_start="18834" i_stop="19276" i_length="443"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="19277" e_stop="19321" e_length="45"/>
          </exon>
          <intron i_serial="6" don_prob="0.958" acc_prob="0.991">
            <gDNA_intron_boundary i_start="19322" i_stop="19588" i_length="267"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="19589" e_stop="19762" e_length="174"/>
          </exon>
          <intron i_serial="7" don_prob="0.992" acc_prob="0.993">
            <gDNA_intron_boundary i_start="19763" i_stop="20907" i_length="1145"/>
          </intron>
          <exon e_serial="8" e_score="0.998">
            <gDNA_exon_boundary e_start="20908" e_stop="22133" e_length="1226"/>
          </exon>
          <intron i_serial="8" don_prob="0.000" acc_prob="0.666">
            <gDNA_intron_boundary i_start="22134" i_stop="22955" i_length="822"/>
          </intron>
          <exon e_serial="9" e_score="0.714">
            <gDNA_exon_boundary e_start="22956" e_stop="22978" e_length="23"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15742" stop="16260"/>
              <exon start="16780" stop="17404"/>
              <exon start="18076" stop="18140"/>
              <exon start="18542" stop="18619"/>
              <exon start="18723" stop="18833"/>
              <exon start="19277" stop="19321"/>
              <exon start="19589" stop="19762"/>
              <exon start="20908" stop="22133"/>
              <exon start="22956" stop="22969"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E745835" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15758" stop="16260"/>
              <exon start="16780" stop="17057"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E553519" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15764" stop="16260"/>
              <exon start="16780" stop="16847"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E325335" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15778" stop="16260"/>
              <exon start="16780" stop="16969"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E316455" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15902" stop="16260"/>
              <exon start="16780" stop="16957"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E469003" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15916" stop="16260"/>
              <exon start="16780" stop="17290"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E738693" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15925" stop="16260"/>
              <exon start="16780" stop="17109"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E441729" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15925" stop="16260"/>
              <exon start="16780" stop="17090"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E482775" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15925" stop="16260"/>
              <exon start="16780" stop="17042"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E484850" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15925" stop="16260"/>
              <exon start="16780" stop="16954"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E419351" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15925" stop="16260"/>
              <exon start="16780" stop="16954"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E441730" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16004" stop="16260"/>
              <exon start="16780" stop="17003"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E487327" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17053" stop="17404"/>
              <exon start="18076" stop="18140"/>
              <exon start="18542" stop="18561"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E446922" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17189" stop="17404"/>
              <exon start="18076" stop="18140"/>
              <exon start="18542" stop="18619"/>
              <exon start="18723" stop="18833"/>
              <exon start="19277" stop="19321"/>
              <exon start="19589" stop="19762"/>
              <exon start="20908" stop="21051"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E703399" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17288" stop="17404"/>
              <exon start="18076" stop="18140"/>
              <exon start="18542" stop="18619"/>
              <exon start="18723" stop="18833"/>
              <exon start="19277" stop="19321"/>
              <exon start="19589" stop="19762"/>
              <exon start="20908" stop="21023"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E379910" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17288" stop="17404"/>
              <exon start="18076" stop="18140"/>
              <exon start="18542" stop="18619"/>
              <exon start="18723" stop="18833"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E200074" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19608" stop="19762"/>
              <exon start="20908" stop="21152"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E406736" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20908" stop="21466"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E564795" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21050" stop="21541"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E318941" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21182" stop="21895"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E589586" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21214" stop="21878"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E333060" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21214" stop="21745"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E334644" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21214" stop="21739"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E333394" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21355" stop="21917"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E328810" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21425" stop="22118"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E379790" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21484" stop="22070"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E589890" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21575" stop="22065"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E419352" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21597" stop="21933"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E242138" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21812" stop="22133"/>
              <exon start="22956" stop="22978"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E217624" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GAGCTTTCCATTCTCGGTGAATCTAATCCTCACAGGGATCCCTTCTTCGGGGACCCATTTTGCATCAAACGATTTCAACATTGACCTCCATTGTCGTTACTTGTTGGTTTTTCTTTTCACAATCGAATACCCCTAATTCTCTGTACTAGTCTCTATTCAATTGGGTTTTCTATACTTGTCAACTGGGTCGTCTTCTATTTCCACTAGGTCACTCTGGTTCTTGAAATCTTGGGTTCCTGTTATCCCTGTGAACTTCATCTTTCTGTAATGGAAAATTCCATTGTTCTTCATACTGGAAATCAATTCCACCCCAGCTTACCCTTTTTCTCATTTAGGCCCAAAAAGTTATCTCGAATTCATGGCTCCAGTAGAGAGCAAATGTGGAGGATCAAGCGCGTTAAAGCAACAGGTGAAAATTCTGGGGAAGCTGCAAGTGCTGATGAATCGGATGATGCCTTACAGGTTACAATTGAAAAGAGCAAAAAGGTTTTAGCCATGCAACAGGACCTACTTCAACAG : ATTGCAGAAAGAAGAAAAGTAGTCTCTTCAATAAAAAGCAGTCTTGCCGATGCTACTGGTACTTATGATGGTGGGAGTGGTAGCTTATCAGATGTTGATATCCCTGACGTGGATAAAGATTATAATGTTACTGTACCTAGTACTGCTGCTACTCCAATTACTGATGTCGATAAAAATACACCGCCTGCTATAAGCCAAGATTTTGTTGAAAGTAAAAGAGAAGTCAAAAGGGACCTGGCCGATGAAAGGGCACCCCCACTTTCAAGATCATCCATCACAGCCAGTAGCCAGACTTCCTCTACTGTAAGTTCCAAAAGAATATTGAATGTCCCTCCAGAAACTCCGAAGTTCAGTCAAGAGACACTTTTGAATGTGAATTCGCGTAAAAGTTTAGTCGATGTTCCTGGAAAGAAGATCCAGTCTTATATGCCTTCATTATGTAAAGAATCCTCAGCACAATCCCTTGTGGAAAAGAGGAATGAAAATCTTGAAGGATCAAGTGCTGAGGCAAACGAAGAGACTGAAGATCTTGTGAATATAGATGAGAAACCTCCTCCATTGGCCGGAACAAATGTTATGAACATTATTTTGGTGGCTTCAGAATGCGCTCCATGGTCTAAAACAG : GTGGGCTTGGAGATGTTGCTGGAGCATTACCGAAAGCTTTGGCTCGACGTGGCCACAGAGTTATG : GTTGTGGCACCTCGTTATGACAACTATCCTGAACCTCAAGATTCTGGTGTAAGAAAAATTTATAAAGTTCATGGTCAG : GATGTAGAAGTGACTTACTTCCAAGCTTTTATTGATGGTGTGGATTTTGTTTTCATTGACAGCCATATGTTTAGACACATTGGGAACAACATTTACGGAGGGAACCGTGTG : GATATTTTAAAGCGCATGGTTTTATTTTGCAAAGCAGCGATTGAG : GTTCCTTGGCATGTTCCATGTGGTGGGGTCTGCTATGGAGATGGAAACTTAGTGTTCATTGCTAATGATTGGCATACTGCTTTATTGCCAGTATATCTGAAAGCTTATTATCGTGACAATGGAATTATGAACTATACAAGATCTGTCCTGGTGATTCATAACATCGCTCATCAG : GGTCGTGGTCCTTTGGAGGATTTTTCATATGTAGATCTTCCACCACACTATATGGACCCTTTCAAATTGTATGACCCAGTAGGAGGTGAGCATTTCAACATTTTTGCGGCTGGTCTAAAGACAGCAGATCGTGTAGTTACAGTTAGTCATGGATATTCATGGGAACTCAAGACTTCCGAAGGTGGTTGGGGATTGCATCAGATAATTAATGAGAACGATTGGAAATTACGGGGTATTGTGAATGGGATTGATACAAAAGAGTGGAACCCTGAGTTGGACGTTCACTTACAGTCAGATGGTTACGTGAACTACTCCTTGGACACACTGCAGACTGGCAAGCCTCAATGTAAAGCTGCATTGCAGAAGGAACTTGGTTTACCAGTTCGTGATGATGTCCCACTGATTGGTTTCATTGGGAGGCTTGACCCACAAAAGGGTGTTGATCTGATTGCTGAGGCAGTGCCTTGGATGATGGGTCAGGATGTACAACTGGTCATGTTGGGTACGGGGAGGCCTGACCTTGAACAGATGCTAAGGCAATTTGAGTGTCAACACAATGATAAAATTAGAGGATGGGTTGGTTTCTCTGTGAAGACTTCTCATCGTATAACTGCTGGTGCAGACATTCTGCTCATGCCTTCTAGATTTGAGCCTTGTGGACTGAACCAGCTTTATGCAATGACATATGGGACTATTCCTGTTGTTCATGCAGTAGGAGGACTCAGAGATACTGTGCAGCCCTTTGATCCTTTTAATGAGTCAGGACTGGGGTGGACCTTCAGTAGGGCTGAAGCTAACCAGCTGATCCACGCATTAGGAAATTGCTTGCTGACTTATCGTGAGTACAAAAAGAGTTGGGAGGGGATTCAGACGCGTTGTATGACACAAGACTTAAGTTGGGATAATGCTGCTCAGAACTATGAAGAAGTTCTCATTGCTGCTAAGTATCAGTGGTGAGGTTCATTACTTGTAGATATTTGGGGGTTTTATCAAGTTCCAATGATGGCATTTCAGAGACATGTTACTGGTATCGCCACGAGAGGATGCAACAAGTTGGTTAACTATCATACTACTACCACGTCAGGAATGATTGCCGCGCTTGATCATATAATCATGTATATACTCTATTTTGTTAGCAAAATGTAGTTACATGTTGCAATTTCTACTCTATATTTTTTGGAAGTTTTAGTTGTCAAATAATCAGCCACCTCAATTTTTGTTTAGAT : ACAAATCAAAAAAGGACAAAAAG</gDNA_template>
            <first_frame> E  L  S  I  L  G  E  S  N  P  H  R  D  P  F  F  G  D  P  F  C  I  K  R  F  Q  H  *  P  P  L  S  L  L  V  G  F  S  F  H  N  R  I  P  L  I  L  C  T  S  L  Y  S  I  G  F  S  I  L  V  N  W  V  V  F  Y  F  H  *  V  T  L  V  L  E  I  L  G  S  C  Y  P  C  E  L  H  L  S  V  M  E  N  S  I  V  L  H  T  G  N  Q  F  H  P  S  L  P  F  F  S  F  R  P  K  K  L  S  R  I  H  G  S  S  R  E  Q  M  W  R  I  K  R  V  K  A  T  G  E  N  S  G  E  A  A  S  A  D  E  S  D  D  A  L  Q  V  T  I  E  K  S  K  K  V  L  A  M  Q  Q  D  L  L  Q  Q  :  I  A  E  R  R  K  V  V  S  S  I  K  S  S  L  A  D  A  T  G  T  Y  D  G  G  S  G  S  L  S  D  V  D  I  P  D  V  D  K  D  Y  N  V  T  V  P  S  T  A  A  T  P  I  T  D  V  D  K  N  T  P  P  A  I  S  Q  D  F  V  E  S  K  R  E  V  K  R  D  L  A  D  E  R  A  P  P  L  S  R  S  S  I  T  A  S  S  Q  T  S  S  T  V  S  S  K  R  I  L  N  V  P  P  E  T  P  K  F  S  Q  E  T  L  L  N  V  N  S  R  K  S  L  V  D  V  P  G  K  K  I  Q  S  Y  M  P  S  L  C  K  E  S  S  A  Q  S  L  V  E  K  R  N  E  N  L  E  G  S  S  A  E  A  N  E  E  T  E  D  L  V  N  I  D  E  K  P  P  P  L  A  G  T  N  V  M  N  I  I  L  V  A  S  E  C  A  P  W  S  K  T   : G  G  L  G  D  V  A  G  A  L  P  K  A  L  A  R  R  G  H  R  V  M  :  V  V  A  P  R  Y  D  N  Y  P  E  P  Q  D  S  G  V  R  K  I  Y  K  V  H  G  Q  :  D  V  E  V  T  Y  F  Q  A  F  I  D  G  V  D  F  V  F  I  D  S  H  M  F  R  H  I  G  N  N  I  Y  G  G  N  R  V  :  D  I  L  K  R  M  V  L  F  C  K  A  A  I  E  :  V  P  W  H  V  P  C  G  G  V  C  Y  G  D  G  N  L  V  F  I  A  N  D  W  H  T  A  L  L  P  V  Y  L  K  A  Y  Y  R  D  N  G  I  M  N  Y  T  R  S  V  L  V  I  H  N  I  A  H  Q  :  G  R  G  P  L  E  D  F  S  Y  V  D  L  P  P  H  Y  M  D  P  F  K  L  Y  D  P  V  G  G  E  H  F  N  I  F  A  A  G  L  K  T  A  D  R  V  V  T  V  S  H  G  Y  S  W  E  L  K  T  S  E  G  G  W  G  L  H  Q  I  I  N  E  N  D  W  K  L  R  G  I  V  N  G  I  D  T  K  E  W  N  P  E  L  D  V  H  L  Q  S  D  G  Y  V  N  Y  S  L  D  T  L  Q  T  G  K  P  Q  C  K  A  A  L  Q  K  E  L  G  L  P  V  R  D  D  V  P  L  I  G  F  I  G  R  L  D  P  Q  K  G  V  D  L  I  A  E  A  V  P  W  M  M  G  Q  D  V  Q  L  V  M  L  G  T  G  R  P  D  L  E  Q  M  L  R  Q  F  E  C  Q  H  N  D  K  I  R  G  W  V  G  F  S  V  K  T  S  H  R  I  T  A  G  A  D  I  L  L  M  P  S  R  F  E  P  C  G  L  N  Q  L  Y  A  M  T  Y  G  T  I  P  V  V  H  A  V  G  G  L  R  D  T  V  Q  P  F  D  P  F  N  E  S  G  L  G  W  T  F  S  R  A  E  A  N  Q  L  I  H  A  L  G  N  C  L  L  T  Y  R  E  Y  K  K  S  W  E  G  I  Q  T  R  C  M  T  Q  D  L  S  W  D  N  A  A  Q  N  Y  E  E  V  L  I  A  A  K  Y  Q  W  *  G  S  L  L  V  D  I  W  G  F  Y  Q  V  P  M  M  A  F  Q  R  H  V  T  G  I  A  T  R  G  C  N  K  L  V  N  Y  H  T  T  T  T  S  G  M  I  A  A  L  D  H  I  I  M  Y  I  L  Y  F  V  S  K  M  *  L  H  V  A  I  S  T  L  Y  F  L  E  V  L  V  V  K  *  S  A  T  S  I  F  V  *  I :   Q  I  K  K  G  Q  K  </first_frame>
            <second_frame>  S  F  P  F  S  V  N  L  I  L  T  G  I  P  S  S  G  T  H  F  A  S  N  D  F  N  I  D  L  H  C  R  Y  L  L  V  F  L  F  T  I  E  Y  P  *  F  S  V  L  V  S  I  Q  L  G  F  L  Y  L  S  T  G  S  S  S  I  S  T  R  S  L  W  F  L  K  S  W  V  P  V  I  P  V  N  F  I  F  L  *  W  K  I  P  L  F  F  I  L  E  I  N  S  T  P  A  Y  P  F  S  H  L  G  P  K  S  Y  L  E  F  M  A  P  V  E  S  K  C  G  G  S  S  A  L  K  Q  Q  V  K  I  L  G  K  L  Q  V  L  M  N  R  M  M  P  Y  R  L  Q  L  K  R  A  K  R  F  *  P  C  N  R  T  Y  F  N  R :   L  Q  K  E  E  K  *  S  L  Q  *  K  A  V  L  P  M  L  L  V  L  M  M  V  G  V  V  A  Y  Q  M  L  I  S  L  T  W  I  K  I  I  M  L  L  Y  L  V  L  L  L  L  Q  L  L  M  S  I  K  I  H  R  L  L  *  A  K  I  L  L  K  V  K  E  K  S  K  G  T  W  P  M  K  G  H  P  H  F  Q  D  H  P  S  Q  P  V  A  R  L  P  L  L  *  V  P  K  E  Y  *  M  S  L  Q  K  L  R  S  S  V  K  R  H  F  *  M  *  I  R  V  K  V  *  S  M  F  L  E  R  R  S  S  L  I  C  L  H  Y  V  K  N  P  Q  H  N  P  L  W  K  R  G  M  K  I  L  K  D  Q  V  L  R  Q  T  K  R  L  K  I  L  *  I  *  M  R  N  L  L  H  W  P  E  Q  M  L  *  T  L  F  W  W  L  Q  N  A  L  H  G  L  K  Q  :  V  G  L  E  M  L  L  E  H  Y  R  K  L  W  L  D  V  A  T  E  L  W :   L  W  H  L  V  M  T  T  I  L  N  L  K  I  L  V  *  E  K  F  I  K  F  M  V  R :   M  *  K  *  L  T  S  K  L  L  L  M  V  W  I  L  F  S  L  T  A  I  C  L  D  T  L  G  T  T  F  T  E  G  T  V  W :   I  F  *  S  A  W  F  Y  F  A  K  Q  R  L  R :   F  L  G  M  F  H  V  V  G  S  A  M  E  M  E  T  *  C  S  L  L  M  I  G  I  L  L  Y  C  Q  Y  I  *  K  L  I  I  V  T  M  E  L  *  T  I  Q  D  L  S  W  *  F  I  T  S  L  I  R :   V  V  V  L  W  R  I  F  H  M  *  I  F  H  H  T  I  W  T  L  S  N  C  M  T  Q  *  E  V  S  I  S  T  F  L  R  L  V  *  R  Q  Q  I  V  *  L  Q  L  V  M  D  I  H  G  N  S  R  L  P  K  V  V  G  D  C  I  R  *  L  M  R  T  I  G  N  Y  G  V  L  *  M  G  L  I  Q  K  S  G  T  L  S  W  T  F  T  Y  S  Q  M  V  T  *  T  T  P  W  T  H  C  R  L  A  S  L  N  V  K  L  H  C  R  R  N  L  V  Y  Q  F  V  M  M  S  H  *  L  V  S  L  G  G  L  T  H  K  R  V  L  I  *  L  L  R  Q  C  L  G  *  W  V  R  M  Y  N  W  S  C  W  V  R  G  G  L  T  L  N  R  C  *  G  N  L  S  V  N  T  M  I  K  L  E  D  G  L  V  S  L  *  R  L  L  I  V  *  L  L  V  Q  T  F  C  S  C  L  L  D  L  S  L  V  D  *  T  S  F  M  Q  *  H  M  G  L  F  L  L  F  M  Q  *  E  D  S  E  I  L  C  S  P  L  I  L  L  M  S  Q  D  W  G  G  P  S  V  G  L  K  L  T  S  *  S  T  H  *  E  I  A  C  *  L  I  V  S  T  K  R  V  G  R  G  F  R  R  V  V  *  H  K  T  *  V  G  I  M  L  L  R  T  M  K  K  F  S  L  L  L  S  I  S  G  E  V  H  Y  L  *  I  F  G  G  F  I  K  F  Q  *  W  H  F  R  D  M  L  L  V  S  P  R  E  D  A  T  S  W  L  T  I  I  L  L  P  R  Q  E  *  L  P  R  L  I  I  *  S  C  I  Y  S  I  L  L  A  K  C  S  Y  M  L  Q  F  L  L  Y  I  F  W  K  F  *  L  S  N  N  Q  P  P  Q  F  L  F  R   : Y  K  S  K  K  D  K  K </second_frame>
            <third_frame>   A  F  H  S  R  *  I  *  S  S  Q  G  S  L  L  R  G  P  I  L  H  Q  T  I  S  T  L  T  S  I  V  V  T  C  W  F  F  F  S  Q  S  N  T  P  N  S  L  Y  *  S  L  F  N  W  V  F  Y  T  C  Q  L  G  R  L  L  F  P  L  G  H  S  G  S  *  N  L  G  F  L  L  S  L  *  T  S  S  F  C  N  G  K  F  H  C  S  S  Y  W  K  S  I  P  P  Q  L  T  L  F  L  I  *  A  Q  K  V  I  S  N  S  W  L  Q  *  R  A  N  V  E  D  Q  A  R  *  S  N  R  *  K  F  W  G  S  C  K  C  *  *  I  G  *  C  L  T  G  Y  N  *  K  E  Q  K  G  F  S  H  A  T  G  P  T  S  T   : D  C  R  K  K  K  S  S  L  F  N  K  K  Q  S  C  R  C  Y  W  Y  L  *  W  W  E  W  *  L  I  R  C  *  Y  P  *  R  G  *  R  L  *  C  Y  C  T  *  Y  C  C  Y  S  N  Y  *  C  R  *  K  Y  T  A  C  Y  K  P  R  F  C  *  K  *  K  R  S  Q  K  G  P  G  R  *  K  G  T  P  T  F  K  I  I  H  H  S  Q  *  P  D  F  L  Y  C  K  F  Q  K  N  I  E  C  P  S  R  N  S  E  V  Q  S  R  D  T  F  E  C  E  F  A  *  K  F  S  R  C  S  W  K  E  D  P  V  L  Y  A  F  I  M  *  R  I  L  S  T  I  P  C  G  K  E  E  *  K  S  *  R  I  K  C  *  G  K  R  R  D  *  R  S  C  E  Y  R  *  E  T  S  S  I  G  R  N  K  C  Y  E  H  Y  F  G  G  F  R  M  R  S  M  V  *  N  R :   W  A  W  R  C  C  W  S  I  T  E  S  F  G  S  T  W  P  Q  S  Y   : G  C  G  T  S  L  *  Q  L  S  *  T  S  R  F  W  C  K  K  N  L  *  S  S  W  S   : G  C  R  S  D  L  L  P  S  F  Y  *  W  C  G  F  C  F  H  *  Q  P  Y  V  *  T  H  W  E  Q  H  L  R  R  E  P  C   : G  Y  F  K  A  H  G  F  I  L  Q  S  S  D  *   : G  S  L  A  C  S  M  W  W  G  L  L  W  R  W  K  L  S  V  H  C  *  *  L  A  Y  C  F  I  A  S  I  S  E  S  L  L  S  *  Q  W  N  Y  E  L  Y  K  I  C  P  G  D  S  *  H  R  S  S   : G  S  W  S  F  G  G  F  F  I  C  R  S  S  T  T  L  Y  G  P  F  Q  I  V  *  P  S  R  R  *  A  F  Q  H  F  C  G  W  S  K  D  S  R  S  C  S  Y  S  *  S  W  I  F  M  G  T  Q  D  F  R  R  W  L  G  I  A  S  D  N  *  *  E  R  L  E  I  T  G  Y  C  E  W  D  *  Y  K  R  V  E  P  *  V  G  R  S  L  T  V  R  W  L  R  E  L  L  L  G  H  T  A  D  W  Q  A  S  M  *  S  C  I  A  E  G  T  W  F  T  S  S  *  *  C  P  T  D  W  F  H  W  E  A  *  P  T  K  G  C  *  S  D  C  *  G  S  A  L  D  D  G  S  G  C  T  T  G  H  V  G  Y  G  E  A  *  P  *  T  D  A  K  A  I  *  V  S  T  Q  *  *  N  *  R  M  G  W  F  L  C  E  D  F  S  S  Y  N  C  W  C  R  H  S  A  H  A  F  *  I  *  A  L  W  T  E  P  A  L  C  N  D  I  W  D  Y  S  C  C  S  C  S  R  R  T  Q  R  Y  C  A  A  L  *  S  F  *  *  V  R  T  G  V  D  L  Q  *  G  *  S  *  P  A  D  P  R  I  R  K  L  L  A  D  L  S  *  V  Q  K  E  L  G  G  D  S  D  A  L  Y  D  T  R  L  K  L  G  *  C  C  S  E  L  *  R  S  S  H  C  C  *  V  S  V  V  R  F  I  T  C  R  Y  L  G  V  L  S  S  S  N  D  G  I  S  E  T  C  Y  W  Y  R  H  E  R  M  Q  Q  V  G  *  L  S  Y  Y  Y  H  V  R  N  D  C  R  A  *  S  Y  N  H  V  Y  T  L  F  C  *  Q  N  V  V  T  C  C  N  F  Y  S  I  F  F  G  S  F  S  C  Q  I  I  S  H  L  N  F  C  L  D  :  T  N  Q  K  R  T  K   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0054K23.1" strand="+"/>
                <serials PGL_serial="4" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="15949" stop="16260"/>
                    <exon start="16780" stop="17404"/>
                    <exon start="18076" stop="18140"/>
                    <exon start="18542" stop="18619"/>
                    <exon start="18723" stop="18833"/>
                    <exon start="19277" stop="19321"/>
                    <exon start="19589" stop="19762"/>
                    <exon start="20908" stop="21864"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>2364</number_coding_nucleotides>
                  <number_encoded_amino_acids>788</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VTLVLEILGSCYPCELHLSVMENSIVLHTGNQFHPSLPFFSFRPKKLSRIHGSSREQMWRIKRVKATGENSGEAASADESDDALQVTIEKSKKVLAMQQDLLQQIAERRKVVSSIKSSLADATGTYDGGSGSLSDVDIPDVDKDYNVTVPSTAATPITDVDKNTPPAISQDFVESKREVKRDLADERAPPLSRSSITASSQTSSTVSSKRILNVPPETPKFSQETLLNVNSRKSLVDVPGKKIQSYMPSLCKESSAQSLVEKRNENLEGSSAEANEETEDLVNIDEKPPPLAGTNVMNIILVASECAPWSKTGGLGDVAGALPKALARRGHRVMVVAPRYDNYPEPQDSGVRKIYKVHGQDVEVTYFQAFIDGVDFVFIDSHMFRHIGNNIYGGNRVDILKRMVLFCKAAIEVPWHVPCGGVCYGDGNLVFIANDWHTALLPVYLKAYYRDNGIMNYTRSVLVIHNIAHQGRGPLEDFSYVDLPPHYMDPFKLYDPVGGEHFNIFAAGLKTADRVVTVSHGYSWELKTSEGGWGLHQIINENDWKLRGIVNGIDTKEWNPELDVHLQSDGYVNYSLDTLQTGKPQCKAALQKELGLPVRDDVPLIGFIGRLDPQKGVDLIAEAVPWMMGQDVQLVMLGTGRPDLEQMLRQFECQHNDKIRGWVGFSVKTSHRITAGADILLMPSRFEPCGLNQLYAMTYGTIPVVHAVGGLRDTVQPFDPFNESGLGWTFSRAEANQLIHALGNCLLTYREYKKSWEGIQTRCMTQDLSWDNAAQNYEEVLIAAKYQW*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="15758" e_stop="16260"/>
            <exon e_start="16780" e_stop="17404"/>
            <exon e_start="18076" e_stop="18140"/>
            <exon e_start="18542" e_stop="18619"/>
            <exon e_start="18723" e_stop="18833"/>
            <exon e_start="19277" e_stop="19321"/>
            <exon e_start="19589" e_stop="19762"/>
            <exon e_start="20908" e_stop="22130"/>
            <exon e_start="22956" e_stop="22981"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.863" acc_prob="0.912" e_score="1.000"/>
          <exon-intron don_prob="0.908" acc_prob="0.634" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.761" e_score="1.000"/>
          <exon-intron don_prob="0.989" acc_prob="0.855" e_score="1.000"/>
          <exon-intron don_prob="0.913" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.958" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.992" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.666" e_score="0.994"/>
          <exon-only e_score="0.731"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="15758" e_stop="16260" e_length="503"/>
          </exon>
          <intron i_serial="1" don_prob="0.863" acc_prob="0.912">
            <gDNA_intron_boundary i_start="16261" i_stop="16779" i_length="519"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="16780" e_stop="17404" e_length="625"/>
          </exon>
          <intron i_serial="2" don_prob="0.908" acc_prob="0.634">
            <gDNA_intron_boundary i_start="17405" i_stop="18075" i_length="671"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="18076" e_stop="18140" e_length="65"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="0.761">
            <gDNA_intron_boundary i_start="18141" i_stop="18541" i_length="401"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="18542" e_stop="18619" e_length="78"/>
          </exon>
          <intron i_serial="4" don_prob="0.989" acc_prob="0.855">
            <gDNA_intron_boundary i_start="18620" i_stop="18722" i_length="103"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="18723" e_stop="18833" e_length="111"/>
          </exon>
          <intron i_serial="5" don_prob="0.913" acc_prob="0.995">
            <gDNA_intron_boundary i_start="18834" i_stop="19276" i_length="443"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="19277" e_stop="19321" e_length="45"/>
          </exon>
          <intron i_serial="6" don_prob="0.958" acc_prob="0.991">
            <gDNA_intron_boundary i_start="19322" i_stop="19588" i_length="267"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="19589" e_stop="19762" e_length="174"/>
          </exon>
          <intron i_serial="7" don_prob="0.992" acc_prob="0.993">
            <gDNA_intron_boundary i_start="19763" i_stop="20907" i_length="1145"/>
          </intron>
          <exon e_serial="8" e_score="0.994">
            <gDNA_exon_boundary e_start="20908" e_stop="22130" e_length="1223"/>
          </exon>
          <intron i_serial="8" don_prob="0.000" acc_prob="0.666">
            <gDNA_intron_boundary i_start="22131" i_stop="22955" i_length="825"/>
          </intron>
          <exon e_serial="9" e_score="0.731">
            <gDNA_exon_boundary e_start="22956" e_stop="22981" e_length="26"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15758" stop="16260"/>
              <exon start="16780" stop="17057"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E553519" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15764" stop="16260"/>
              <exon start="16780" stop="16847"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E325335" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15778" stop="16260"/>
              <exon start="16780" stop="16969"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E316455" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15902" stop="16260"/>
              <exon start="16780" stop="16957"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E469003" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15916" stop="16260"/>
              <exon start="16780" stop="17290"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E738693" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15925" stop="16260"/>
              <exon start="16780" stop="17109"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E441729" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15925" stop="16260"/>
              <exon start="16780" stop="17090"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E482775" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15925" stop="16260"/>
              <exon start="16780" stop="17042"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E484850" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15925" stop="16260"/>
              <exon start="16780" stop="16954"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E419351" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15925" stop="16260"/>
              <exon start="16780" stop="16954"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E441730" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16004" stop="16260"/>
              <exon start="16780" stop="17003"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E487327" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17053" stop="17404"/>
              <exon start="18076" stop="18140"/>
              <exon start="18542" stop="18561"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E446922" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17189" stop="17404"/>
              <exon start="18076" stop="18140"/>
              <exon start="18542" stop="18619"/>
              <exon start="18723" stop="18833"/>
              <exon start="19277" stop="19321"/>
              <exon start="19589" stop="19762"/>
              <exon start="20908" stop="21051"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E703399" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17288" stop="17404"/>
              <exon start="18076" stop="18140"/>
              <exon start="18542" stop="18619"/>
              <exon start="18723" stop="18833"/>
              <exon start="19277" stop="19321"/>
              <exon start="19589" stop="19762"/>
              <exon start="20908" stop="21023"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E379910" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17288" stop="17404"/>
              <exon start="18076" stop="18140"/>
              <exon start="18542" stop="18619"/>
              <exon start="18723" stop="18833"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E200074" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19608" stop="19762"/>
              <exon start="20908" stop="21152"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E406736" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20908" stop="21466"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E564795" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21050" stop="21541"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E318941" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21182" stop="21895"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E589586" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21214" stop="21878"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E333060" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21214" stop="21745"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E334644" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21214" stop="21739"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E333394" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21355" stop="21917"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E328810" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21425" stop="22118"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E379790" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21484" stop="22070"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E589890" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21575" stop="22065"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E419352" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21597" stop="21933"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E242138" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21818" stop="22130"/>
              <exon start="22956" stop="22981"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E217576" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTGAATCTAATCCTCACAGGGATCCCTTCTTCGGGGACCCATTTTGCATCAAACGATTTCAACATTGACCTCCATTGTCGTTACTTGTTGGTTTTTCTTTTCACAATCGAATACCCCTAATTCTCTGTACTAGTCTCTATTCAATTGGGTTTTCTATACTTGTCAACTGGGTCGTCTTCTATTTCCACTAGGTCACTCTGGTTCTTGAAATCTTGGGTTCCTGTTATCCCTGTGAACTTCATCTTTCTGTAATGGAAAATTCCATTGTTCTTCATACTGGAAATCAATTCCACCCCAGCTTACCCTTTTTCTCATTTAGGCCCAAAAAGTTATCTCGAATTCATGGCTCCAGTAGAGAGCAAATGTGGAGGATCAAGCGCGTTAAAGCAACAGGTGAAAATTCTGGGGAAGCTGCAAGTGCTGATGAATCGGATGATGCCTTACAGGTTACAATTGAAAAGAGCAAAAAGGTTTTAGCCATGCAACAGGACCTACTTCAACAG : ATTGCAGAAAGAAGAAAAGTAGTCTCTTCAATAAAAAGCAGTCTTGCCGATGCTACTGGTACTTATGATGGTGGGAGTGGTAGCTTATCAGATGTTGATATCCCTGACGTGGATAAAGATTATAATGTTACTGTACCTAGTACTGCTGCTACTCCAATTACTGATGTCGATAAAAATACACCGCCTGCTATAAGCCAAGATTTTGTTGAAAGTAAAAGAGAAGTCAAAAGGGACCTGGCCGATGAAAGGGCACCCCCACTTTCAAGATCATCCATCACAGCCAGTAGCCAGACTTCCTCTACTGTAAGTTCCAAAAGAATATTGAATGTCCCTCCAGAAACTCCGAAGTTCAGTCAAGAGACACTTTTGAATGTGAATTCGCGTAAAAGTTTAGTCGATGTTCCTGGAAAGAAGATCCAGTCTTATATGCCTTCATTATGTAAAGAATCCTCAGCACAATCCCTTGTGGAAAAGAGGAATGAAAATCTTGAAGGATCAAGTGCTGAGGCAAACGAAGAGACTGAAGATCTTGTGAATATAGATGAGAAACCTCCTCCATTGGCCGGAACAAATGTTATGAACATTATTTTGGTGGCTTCAGAATGCGCTCCATGGTCTAAAACAG : GTGGGCTTGGAGATGTTGCTGGAGCATTACCGAAAGCTTTGGCTCGACGTGGCCACAGAGTTATG : GTTGTGGCACCTCGTTATGACAACTATCCTGAACCTCAAGATTCTGGTGTAAGAAAAATTTATAAAGTTCATGGTCAG : GATGTAGAAGTGACTTACTTCCAAGCTTTTATTGATGGTGTGGATTTTGTTTTCATTGACAGCCATATGTTTAGACACATTGGGAACAACATTTACGGAGGGAACCGTGTG : GATATTTTAAAGCGCATGGTTTTATTTTGCAAAGCAGCGATTGAG : GTTCCTTGGCATGTTCCATGTGGTGGGGTCTGCTATGGAGATGGAAACTTAGTGTTCATTGCTAATGATTGGCATACTGCTTTATTGCCAGTATATCTGAAAGCTTATTATCGTGACAATGGAATTATGAACTATACAAGATCTGTCCTGGTGATTCATAACATCGCTCATCAG : GGTCGTGGTCCTTTGGAGGATTTTTCATATGTAGATCTTCCACCACACTATATGGACCCTTTCAAATTGTATGACCCAGTAGGAGGTGAGCATTTCAACATTTTTGCGGCTGGTCTAAAGACAGCAGATCGTGTAGTTACAGTTAGTCATGGATATTCATGGGAACTCAAGACTTCCGAAGGTGGTTGGGGATTGCATCAGATAATTAATGAGAACGATTGGAAATTACGGGGTATTGTGAATGGGATTGATACAAAAGAGTGGAACCCTGAGTTGGACGTTCACTTACAGTCAGATGGTTACGTGAACTACTCCTTGGACACACTGCAGACTGGCAAGCCTCAATGTAAAGCTGCATTGCAGAAGGAACTTGGTTTACCAGTTCGTGATGATGTCCCACTGATTGGTTTCATTGGGAGGCTTGACCCACAAAAGGGTGTTGATCTGATTGCTGAGGCAGTGCCTTGGATGATGGGTCAGGATGTACAACTGGTCATGTTGGGTACGGGGAGGCCTGACCTTGAACAGATGCTAAGGCAATTTGAGTGTCAACACAATGATAAAATTAGAGGATGGGTTGGTTTCTCTGTGAAGACTTCTCATCGTATAACTGCTGGTGCAGACATTCTGCTCATGCCTTCTAGATTTGAGCCTTGTGGACTGAACCAGCTTTATGCAATGACATATGGGACTATTCCTGTTGTTCATGCAGTAGGAGGACTCAGAGATACTGTGCAGCCCTTTGATCCTTTTAATGAGTCAGGACTGGGGTGGACCTTCAGTAGGGCTGAAGCTAACCAGCTGATCCACGCATTAGGAAATTGCTTGCTGACTTATCGTGAGTACAAAAAGAGTTGGGAGGGGATTCAGACGCGTTGTATGACACAAGACTTAAGTTGGGATAATGCTGCTCAGAACTATGAAGAAGTTCTCATTGCTGCTAAGTATCAGTGGTGAGGTTCATTACTTGTAGATATTTGGGGGTTTTATCAAGTTCCAATGATGGCATTTCAGAGACATGTTACTGGTATCGCCACGAGAGGATGCAACAAGTTGGTTAACTATCATACTACTACCACGTCAGGAATGATTGCCGCGCTTGATCATATAATCATGTATATACTCTATTTTGTTAGCAAAATGTAGTTACATGTTGCAATTTCTACTCTATATTTTTTGGAAGTTTTAGTTGTCAAATAATCAGCCACCTCAATTTTTGTTTA : ACAAATCAAAAAAGGACAAAAAGAAA</gDNA_template>
            <first_frame> V  N  L  I  L  T  G  I  P  S  S  G  T  H  F  A  S  N  D  F  N  I  D  L  H  C  R  Y  L  L  V  F  L  F  T  I  E  Y  P  *  F  S  V  L  V  S  I  Q  L  G  F  L  Y  L  S  T  G  S  S  S  I  S  T  R  S  L  W  F  L  K  S  W  V  P  V  I  P  V  N  F  I  F  L  *  W  K  I  P  L  F  F  I  L  E  I  N  S  T  P  A  Y  P  F  S  H  L  G  P  K  S  Y  L  E  F  M  A  P  V  E  S  K  C  G  G  S  S  A  L  K  Q  Q  V  K  I  L  G  K  L  Q  V  L  M  N  R  M  M  P  Y  R  L  Q  L  K  R  A  K  R  F  *  P  C  N  R  T  Y  F  N  R :   L  Q  K  E  E  K  *  S  L  Q  *  K  A  V  L  P  M  L  L  V  L  M  M  V  G  V  V  A  Y  Q  M  L  I  S  L  T  W  I  K  I  I  M  L  L  Y  L  V  L  L  L  L  Q  L  L  M  S  I  K  I  H  R  L  L  *  A  K  I  L  L  K  V  K  E  K  S  K  G  T  W  P  M  K  G  H  P  H  F  Q  D  H  P  S  Q  P  V  A  R  L  P  L  L  *  V  P  K  E  Y  *  M  S  L  Q  K  L  R  S  S  V  K  R  H  F  *  M  *  I  R  V  K  V  *  S  M  F  L  E  R  R  S  S  L  I  C  L  H  Y  V  K  N  P  Q  H  N  P  L  W  K  R  G  M  K  I  L  K  D  Q  V  L  R  Q  T  K  R  L  K  I  L  *  I  *  M  R  N  L  L  H  W  P  E  Q  M  L  *  T  L  F  W  W  L  Q  N  A  L  H  G  L  K  Q  :  V  G  L  E  M  L  L  E  H  Y  R  K  L  W  L  D  V  A  T  E  L  W :   L  W  H  L  V  M  T  T  I  L  N  L  K  I  L  V  *  E  K  F  I  K  F  M  V  R :   M  *  K  *  L  T  S  K  L  L  L  M  V  W  I  L  F  S  L  T  A  I  C  L  D  T  L  G  T  T  F  T  E  G  T  V  W :   I  F  *  S  A  W  F  Y  F  A  K  Q  R  L  R :   F  L  G  M  F  H  V  V  G  S  A  M  E  M  E  T  *  C  S  L  L  M  I  G  I  L  L  Y  C  Q  Y  I  *  K  L  I  I  V  T  M  E  L  *  T  I  Q  D  L  S  W  *  F  I  T  S  L  I  R :   V  V  V  L  W  R  I  F  H  M  *  I  F  H  H  T  I  W  T  L  S  N  C  M  T  Q  *  E  V  S  I  S  T  F  L  R  L  V  *  R  Q  Q  I  V  *  L  Q  L  V  M  D  I  H  G  N  S  R  L  P  K  V  V  G  D  C  I  R  *  L  M  R  T  I  G  N  Y  G  V  L  *  M  G  L  I  Q  K  S  G  T  L  S  W  T  F  T  Y  S  Q  M  V  T  *  T  T  P  W  T  H  C  R  L  A  S  L  N  V  K  L  H  C  R  R  N  L  V  Y  Q  F  V  M  M  S  H  *  L  V  S  L  G  G  L  T  H  K  R  V  L  I  *  L  L  R  Q  C  L  G  *  W  V  R  M  Y  N  W  S  C  W  V  R  G  G  L  T  L  N  R  C  *  G  N  L  S  V  N  T  M  I  K  L  E  D  G  L  V  S  L  *  R  L  L  I  V  *  L  L  V  Q  T  F  C  S  C  L  L  D  L  S  L  V  D  *  T  S  F  M  Q  *  H  M  G  L  F  L  L  F  M  Q  *  E  D  S  E  I  L  C  S  P  L  I  L  L  M  S  Q  D  W  G  G  P  S  V  G  L  K  L  T  S  *  S  T  H  *  E  I  A  C  *  L  I  V  S  T  K  R  V  G  R  G  F  R  R  V  V  *  H  K  T  *  V  G  I  M  L  L  R  T  M  K  K  F  S  L  L  L  S  I  S  G  E  V  H  Y  L  *  I  F  G  G  F  I  K  F  Q  *  W  H  F  R  D  M  L  L  V  S  P  R  E  D  A  T  S  W  L  T  I  I  L  L  P  R  Q  E  *  L  P  R  L  I  I  *  S  C  I  Y  S  I  L  L  A  K  C  S  Y  M  L  Q  F  L  L  Y  I  F  W  K  F  *  L  S  N  N  Q  P  P  Q  F  L  F   : N  K  S  K  K  D  K  K  K </first_frame>
            <second_frame>  *  I  *  S  S  Q  G  S  L  L  R  G  P  I  L  H  Q  T  I  S  T  L  T  S  I  V  V  T  C  W  F  F  F  S  Q  S  N  T  P  N  S  L  Y  *  S  L  F  N  W  V  F  Y  T  C  Q  L  G  R  L  L  F  P  L  G  H  S  G  S  *  N  L  G  F  L  L  S  L  *  T  S  S  F  C  N  G  K  F  H  C  S  S  Y  W  K  S  I  P  P  Q  L  T  L  F  L  I  *  A  Q  K  V  I  S  N  S  W  L  Q  *  R  A  N  V  E  D  Q  A  R  *  S  N  R  *  K  F  W  G  S  C  K  C  *  *  I  G  *  C  L  T  G  Y  N  *  K  E  Q  K  G  F  S  H  A  T  G  P  T  S  T   : D  C  R  K  K  K  S  S  L  F  N  K  K  Q  S  C  R  C  Y  W  Y  L  *  W  W  E  W  *  L  I  R  C  *  Y  P  *  R  G  *  R  L  *  C  Y  C  T  *  Y  C  C  Y  S  N  Y  *  C  R  *  K  Y  T  A  C  Y  K  P  R  F  C  *  K  *  K  R  S  Q  K  G  P  G  R  *  K  G  T  P  T  F  K  I  I  H  H  S  Q  *  P  D  F  L  Y  C  K  F  Q  K  N  I  E  C  P  S  R  N  S  E  V  Q  S  R  D  T  F  E  C  E  F  A  *  K  F  S  R  C  S  W  K  E  D  P  V  L  Y  A  F  I  M  *  R  I  L  S  T  I  P  C  G  K  E  E  *  K  S  *  R  I  K  C  *  G  K  R  R  D  *  R  S  C  E  Y  R  *  E  T  S  S  I  G  R  N  K  C  Y  E  H  Y  F  G  G  F  R  M  R  S  M  V  *  N  R :   W  A  W  R  C  C  W  S  I  T  E  S  F  G  S  T  W  P  Q  S  Y   : G  C  G  T  S  L  *  Q  L  S  *  T  S  R  F  W  C  K  K  N  L  *  S  S  W  S   : G  C  R  S  D  L  L  P  S  F  Y  *  W  C  G  F  C  F  H  *  Q  P  Y  V  *  T  H  W  E  Q  H  L  R  R  E  P  C   : G  Y  F  K  A  H  G  F  I  L  Q  S  S  D  *   : G  S  L  A  C  S  M  W  W  G  L  L  W  R  W  K  L  S  V  H  C  *  *  L  A  Y  C  F  I  A  S  I  S  E  S  L  L  S  *  Q  W  N  Y  E  L  Y  K  I  C  P  G  D  S  *  H  R  S  S   : G  S  W  S  F  G  G  F  F  I  C  R  S  S  T  T  L  Y  G  P  F  Q  I  V  *  P  S  R  R  *  A  F  Q  H  F  C  G  W  S  K  D  S  R  S  C  S  Y  S  *  S  W  I  F  M  G  T  Q  D  F  R  R  W  L  G  I  A  S  D  N  *  *  E  R  L  E  I  T  G  Y  C  E  W  D  *  Y  K  R  V  E  P  *  V  G  R  S  L  T  V  R  W  L  R  E  L  L  L  G  H  T  A  D  W  Q  A  S  M  *  S  C  I  A  E  G  T  W  F  T  S  S  *  *  C  P  T  D  W  F  H  W  E  A  *  P  T  K  G  C  *  S  D  C  *  G  S  A  L  D  D  G  S  G  C  T  T  G  H  V  G  Y  G  E  A  *  P  *  T  D  A  K  A  I  *  V  S  T  Q  *  *  N  *  R  M  G  W  F  L  C  E  D  F  S  S  Y  N  C  W  C  R  H  S  A  H  A  F  *  I  *  A  L  W  T  E  P  A  L  C  N  D  I  W  D  Y  S  C  C  S  C  S  R  R  T  Q  R  Y  C  A  A  L  *  S  F  *  *  V  R  T  G  V  D  L  Q  *  G  *  S  *  P  A  D  P  R  I  R  K  L  L  A  D  L  S  *  V  Q  K  E  L  G  G  D  S  D  A  L  Y  D  T  R  L  K  L  G  *  C  C  S  E  L  *  R  S  S  H  C  C  *  V  S  V  V  R  F  I  T  C  R  Y  L  G  V  L  S  S  S  N  D  G  I  S  E  T  C  Y  W  Y  R  H  E  R  M  Q  Q  V  G  *  L  S  Y  Y  Y  H  V  R  N  D  C  R  A  *  S  Y  N  H  V  Y  T  L  F  C  *  Q  N  V  V  T  C  C  N  F  Y  S  I  F  F  G  S  F  S  C  Q  I  I  S  H  L  N  F  C  L  :  T  N  Q  K  R  T  K  R   </second_frame>
            <third_frame>   E  S  N  P  H  R  D  P  F  F  G  D  P  F  C  I  K  R  F  Q  H  *  P  P  L  S  L  L  V  G  F  S  F  H  N  R  I  P  L  I  L  C  T  S  L  Y  S  I  G  F  S  I  L  V  N  W  V  V  F  Y  F  H  *  V  T  L  V  L  E  I  L  G  S  C  Y  P  C  E  L  H  L  S  V  M  E  N  S  I  V  L  H  T  G  N  Q  F  H  P  S  L  P  F  F  S  F  R  P  K  K  L  S  R  I  H  G  S  S  R  E  Q  M  W  R  I  K  R  V  K  A  T  G  E  N  S  G  E  A  A  S  A  D  E  S  D  D  A  L  Q  V  T  I  E  K  S  K  K  V  L  A  M  Q  Q  D  L  L  Q  Q  :  I  A  E  R  R  K  V  V  S  S  I  K  S  S  L  A  D  A  T  G  T  Y  D  G  G  S  G  S  L  S  D  V  D  I  P  D  V  D  K  D  Y  N  V  T  V  P  S  T  A  A  T  P  I  T  D  V  D  K  N  T  P  P  A  I  S  Q  D  F  V  E  S  K  R  E  V  K  R  D  L  A  D  E  R  A  P  P  L  S  R  S  S  I  T  A  S  S  Q  T  S  S  T  V  S  S  K  R  I  L  N  V  P  P  E  T  P  K  F  S  Q  E  T  L  L  N  V  N  S  R  K  S  L  V  D  V  P  G  K  K  I  Q  S  Y  M  P  S  L  C  K  E  S  S  A  Q  S  L  V  E  K  R  N  E  N  L  E  G  S  S  A  E  A  N  E  E  T  E  D  L  V  N  I  D  E  K  P  P  P  L  A  G  T  N  V  M  N  I  I  L  V  A  S  E  C  A  P  W  S  K  T   : G  G  L  G  D  V  A  G  A  L  P  K  A  L  A  R  R  G  H  R  V  M  :  V  V  A  P  R  Y  D  N  Y  P  E  P  Q  D  S  G  V  R  K  I  Y  K  V  H  G  Q  :  D  V  E  V  T  Y  F  Q  A  F  I  D  G  V  D  F  V  F  I  D  S  H  M  F  R  H  I  G  N  N  I  Y  G  G  N  R  V  :  D  I  L  K  R  M  V  L  F  C  K  A  A  I  E  :  V  P  W  H  V  P  C  G  G  V  C  Y  G  D  G  N  L  V  F  I  A  N  D  W  H  T  A  L  L  P  V  Y  L  K  A  Y  Y  R  D  N  G  I  M  N  Y  T  R  S  V  L  V  I  H  N  I  A  H  Q  :  G  R  G  P  L  E  D  F  S  Y  V  D  L  P  P  H  Y  M  D  P  F  K  L  Y  D  P  V  G  G  E  H  F  N  I  F  A  A  G  L  K  T  A  D  R  V  V  T  V  S  H  G  Y  S  W  E  L  K  T  S  E  G  G  W  G  L  H  Q  I  I  N  E  N  D  W  K  L  R  G  I  V  N  G  I  D  T  K  E  W  N  P  E  L  D  V  H  L  Q  S  D  G  Y  V  N  Y  S  L  D  T  L  Q  T  G  K  P  Q  C  K  A  A  L  Q  K  E  L  G  L  P  V  R  D  D  V  P  L  I  G  F  I  G  R  L  D  P  Q  K  G  V  D  L  I  A  E  A  V  P  W  M  M  G  Q  D  V  Q  L  V  M  L  G  T  G  R  P  D  L  E  Q  M  L  R  Q  F  E  C  Q  H  N  D  K  I  R  G  W  V  G  F  S  V  K  T  S  H  R  I  T  A  G  A  D  I  L  L  M  P  S  R  F  E  P  C  G  L  N  Q  L  Y  A  M  T  Y  G  T  I  P  V  V  H  A  V  G  G  L  R  D  T  V  Q  P  F  D  P  F  N  E  S  G  L  G  W  T  F  S  R  A  E  A  N  Q  L  I  H  A  L  G  N  C  L  L  T  Y  R  E  Y  K  K  S  W  E  G  I  Q  T  R  C  M  T  Q  D  L  S  W  D  N  A  A  Q  N  Y  E  E  V  L  I  A  A  K  Y  Q  W  *  G  S  L  L  V  D  I  W  G  F  Y  Q  V  P  M  M  A  F  Q  R  H  V  T  G  I  A  T  R  G  C  N  K  L  V  N  Y  H  T  T  T  T  S  G  M  I  A  A  L  D  H  I  I  M  Y  I  L  Y  F  V  S  K  M  *  L  H  V  A  I  S  T  L  Y  F  L  E  V  L  V  V  K  *  S  A  T  S  I  F  V  * :   Q  I  K  K  G  Q  K  E  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0054K23.1" strand="+"/>
                <serials PGL_serial="4" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="15949" stop="16260"/>
                    <exon start="16780" stop="17404"/>
                    <exon start="18076" stop="18140"/>
                    <exon start="18542" stop="18619"/>
                    <exon start="18723" stop="18833"/>
                    <exon start="19277" stop="19321"/>
                    <exon start="19589" stop="19762"/>
                    <exon start="20908" stop="21864"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>2364</number_coding_nucleotides>
                  <number_encoded_amino_acids>788</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VTLVLEILGSCYPCELHLSVMENSIVLHTGNQFHPSLPFFSFRPKKLSRIHGSSREQMWRIKRVKATGENSGEAASADESDDALQVTIEKSKKVLAMQQDLLQQIAERRKVVSSIKSSLADATGTYDGGSGSLSDVDIPDVDKDYNVTVPSTAATPITDVDKNTPPAISQDFVESKREVKRDLADERAPPLSRSSITASSQTSSTVSSKRILNVPPETPKFSQETLLNVNSRKSLVDVPGKKIQSYMPSLCKESSAQSLVEKRNENLEGSSAEANEETEDLVNIDEKPPPLAGTNVMNIILVASECAPWSKTGGLGDVAGALPKALARRGHRVMVVAPRYDNYPEPQDSGVRKIYKVHGQDVEVTYFQAFIDGVDFVFIDSHMFRHIGNNIYGGNRVDILKRMVLFCKAAIEVPWHVPCGGVCYGDGNLVFIANDWHTALLPVYLKAYYRDNGIMNYTRSVLVIHNIAHQGRGPLEDFSYVDLPPHYMDPFKLYDPVGGEHFNIFAAGLKTADRVVTVSHGYSWELKTSEGGWGLHQIINENDWKLRGIVNGIDTKEWNPELDVHLQSDGYVNYSLDTLQTGKPQCKAALQKELGLPVRDDVPLIGFIGRLDPQKGVDLIAEAVPWMMGQDVQLVMLGTGRPDLEQMLRQFECQHNDKIRGWVGFSVKTSHRITAGADILLMPSRFEPCGLNQLYAMTYGTIPVVHAVGGLRDTVQPFDPFNESGLGWTFSRAEANQLIHALGNCLLTYREYKKSWEGIQTRCMTQDLSWDNAAQNYEEVLIAAKYQW*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="4">
          <exon_coordinates>
            <exon e_start="15758" e_stop="16260"/>
            <exon e_start="16780" e_stop="17404"/>
            <exon e_start="18076" e_stop="18140"/>
            <exon e_start="18542" e_stop="18619"/>
            <exon e_start="18723" e_stop="18833"/>
            <exon e_start="19277" e_stop="19321"/>
            <exon e_start="19589" e_stop="19762"/>
            <exon e_start="20908" e_stop="22103"/>
            <exon e_start="22956" e_stop="22968"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.863" acc_prob="0.912" e_score="1.000"/>
          <exon-intron don_prob="0.908" acc_prob="0.634" e_score="0.960"/>
          <exon-intron don_prob="1.000" acc_prob="0.761" e_score="1.000"/>
          <exon-intron don_prob="0.989" acc_prob="0.855" e_score="1.000"/>
          <exon-intron don_prob="0.913" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.958" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.992" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.666" e_score="0.955"/>
          <exon-only e_score="0.769"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="15758" e_stop="16260" e_length="503"/>
          </exon>
          <intron i_serial="1" don_prob="0.863" acc_prob="0.912">
            <gDNA_intron_boundary i_start="16261" i_stop="16779" i_length="519"/>
          </intron>
          <exon e_serial="2" e_score="0.960">
            <gDNA_exon_boundary e_start="16780" e_stop="17404" e_length="625"/>
          </exon>
          <intron i_serial="2" don_prob="0.908" acc_prob="0.634">
            <gDNA_intron_boundary i_start="17405" i_stop="18075" i_length="671"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="18076" e_stop="18140" e_length="65"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="0.761">
            <gDNA_intron_boundary i_start="18141" i_stop="18541" i_length="401"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="18542" e_stop="18619" e_length="78"/>
          </exon>
          <intron i_serial="4" don_prob="0.989" acc_prob="0.855">
            <gDNA_intron_boundary i_start="18620" i_stop="18722" i_length="103"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="18723" e_stop="18833" e_length="111"/>
          </exon>
          <intron i_serial="5" don_prob="0.913" acc_prob="0.995">
            <gDNA_intron_boundary i_start="18834" i_stop="19276" i_length="443"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="19277" e_stop="19321" e_length="45"/>
          </exon>
          <intron i_serial="6" don_prob="0.958" acc_prob="0.991">
            <gDNA_intron_boundary i_start="19322" i_stop="19588" i_length="267"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="19589" e_stop="19762" e_length="174"/>
          </exon>
          <intron i_serial="7" don_prob="0.992" acc_prob="0.993">
            <gDNA_intron_boundary i_start="19763" i_stop="20907" i_length="1145"/>
          </intron>
          <exon e_serial="8" e_score="0.955">
            <gDNA_exon_boundary e_start="20908" e_stop="22103" e_length="1196"/>
          </exon>
          <intron i_serial="8" don_prob="0.000" acc_prob="0.666">
            <gDNA_intron_boundary i_start="22104" i_stop="22955" i_length="852"/>
          </intron>
          <exon e_serial="9" e_score="0.769">
            <gDNA_exon_boundary e_start="22956" e_stop="22968" e_length="13"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15758" stop="16260"/>
              <exon start="16780" stop="17057"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E553519" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15764" stop="16260"/>
              <exon start="16780" stop="16847"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E325335" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15778" stop="16260"/>
              <exon start="16780" stop="16969"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E316455" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15902" stop="16260"/>
              <exon start="16780" stop="16957"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E469003" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15916" stop="16260"/>
              <exon start="16780" stop="17290"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E738693" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15925" stop="16260"/>
              <exon start="16780" stop="17109"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E441729" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15925" stop="16260"/>
              <exon start="16780" stop="17090"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E482775" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15925" stop="16260"/>
              <exon start="16780" stop="17042"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E484850" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15925" stop="16260"/>
              <exon start="16780" stop="16954"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E419351" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15925" stop="16260"/>
              <exon start="16780" stop="16954"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E441730" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16004" stop="16260"/>
              <exon start="16780" stop="17404"/>
              <exon start="18076" stop="18140"/>
              <exon start="18542" stop="18619"/>
              <exon start="18723" stop="18833"/>
              <exon start="19277" stop="19321"/>
              <exon start="19589" stop="19762"/>
              <exon start="20908" stop="22103"/>
              <exon start="22956" stop="22968"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E624233" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16004" stop="16260"/>
              <exon start="16780" stop="17003"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E487327" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17053" stop="17404"/>
              <exon start="18076" stop="18140"/>
              <exon start="18542" stop="18561"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E446922" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17189" stop="17404"/>
              <exon start="18076" stop="18140"/>
              <exon start="18542" stop="18619"/>
              <exon start="18723" stop="18833"/>
              <exon start="19277" stop="19321"/>
              <exon start="19589" stop="19762"/>
              <exon start="20908" stop="21051"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E703399" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17288" stop="17404"/>
              <exon start="18076" stop="18140"/>
              <exon start="18542" stop="18619"/>
              <exon start="18723" stop="18833"/>
              <exon start="19277" stop="19321"/>
              <exon start="19589" stop="19762"/>
              <exon start="20908" stop="21023"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E379910" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17288" stop="17404"/>
              <exon start="18076" stop="18140"/>
              <exon start="18542" stop="18619"/>
              <exon start="18723" stop="18833"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E200074" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19608" stop="19762"/>
              <exon start="20908" stop="21152"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E406736" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20908" stop="21466"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E564795" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21050" stop="21541"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E318941" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21182" stop="21895"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E589586" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21214" stop="21878"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E333060" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21214" stop="21745"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E334644" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21214" stop="21739"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E333394" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21355" stop="21917"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E328810" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21484" stop="22070"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E589890" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21575" stop="22065"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E419352" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21597" stop="21933"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E242138" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="4" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTGAATCTAATCCTCACAGGGATCCCTTCTTCGGGGACCCATTTTGCATCAAACGATTTCAACATTGACCTCCATTGTCGTTACTTGTTGGTTTTTCTTTTCACAATCGAATACCCCTAATTCTCTGTACTAGTCTCTATTCAATTGGGTTTTCTATACTTGTCAACTGGGTCGTCTTCTATTTCCACTAGGTCACTCTGGTTCTTGAAATCTTGGGTTCCTGTTATCCCTGTGAACTTCATCTTTCTGTAATGGAAAATTCCATTGTTCTTCATACTGGAAATCAATTCCACCCCAGCTTACCCTTTTTCTCATTTAGGCCCAAAAAGTTATCTCGAATTCATGGCTCCAGTAGAGAGCAAATGTGGAGGATCAAGCGCGTTAAAGCAACAGGTGAAAATTCTGGGGAAGCTGCAAGTGCTGATGAATCGGATGATGCCTTACAGGTTACAATTGAAAAGAGCAAAAAGGTTTTAGCCATGCAACAGGACCTACTTCAACAG : ATTGCAGAAAGAAGAAAAGTAGTCTCTTCAATAAAAAGCAGTCTTGCCGATGCTACTGGTACTTATGATGGTGGGAGTGGTAGCTTATCAGATGTTGATATCCCTGACGTGGATAAAGATTATAATGTTACTGTACCTAGTACTGCTGCTACTCCAATTACTGATGTCGATAAAAATACACCGCCTGCTATAAGCCAAGATTTTGTTGAAAGTAAAAGAGAAGTCAAAAGGGACCTGGCCGATGAAAGGGCACCCCCACTTTCAAGATCATCCATCACAGCCAGTAGCCAGACTTCCTCTACTGTAAGTTCCAAAAGAATATTGAATGTCCCTCCAGAAACTCCGAAGTTCAGTCAAGAGACACTTTTGAATGTGAATTCGCGTAAAAGTTTAGTCGATGTTCCTGGAAAGAAGATCCAGTCTTATATGCCTTCATTATGTAAAGAATCCTCAGCACAATCCCTTGTGGAAAAGAGGAATGAAAATCTTGAAGGATCAAGTGCTGAGGCAAACGAAGAGACTGAAGATCTTGTGAATATAGATGAGAAACCTCCTCCATTGGCCGGAACAAATGTTATGAACATTATTTTGGTGGCTTCAGAATGCGCTCCATGGTCTAAAACAG : GTGGGCTTGGAGATGTTGCTGGAGCATTACCGAAAGCTTTGGCTCGACGTGGCCACAGAGTTATG : GTTGTGGCACCTCGTTATGACAACTATCCTGAACCTCAAGATTCTGGTGTAAGAAAAATTTATAAAGTTCATGGTCAG : GATGTAGAAGTGACTTACTTCCAAGCTTTTATTGATGGTGTGGATTTTGTTTTCATTGACAGCCATATGTTTAGACACATTGGGAACAACATTTACGGAGGGAACCGTGTG : GATATTTTAAAGCGCATGGTTTTATTTTGCAAAGCAGCGATTGAG : GTTCCTTGGCATGTTCCATGTGGTGGGGTCTGCTATGGAGATGGAAACTTAGTGTTCATTGCTAATGATTGGCATACTGCTTTATTGCCAGTATATCTGAAAGCTTATTATCGTGACAATGGAATTATGAACTATACAAGATCTGTCCTGGTGATTCATAACATCGCTCATCAG : GGTCGTGGTCCTTTGGAGGATTTTTCATATGTAGATCTTCCACCACACTATATGGACCCTTTCAAATTGTATGACCCAGTAGGAGGTGAGCATTTCAACATTTTTGCGGCTGGTCTAAAGACAGCAGATCGTGTAGTTACAGTTAGTCATGGATATTCATGGGAACTCAAGACTTCCGAAGGTGGTTGGGGATTGCATCAGATAATTAATGAGAACGATTGGAAATTACGGGGTATTGTGAATGGGATTGATACAAAAGAGTGGAACCCTGAGTTGGACGTTCACTTACAGTCAGATGGTTACGTGAACTACTCCTTGGACACACTGCAGACTGGCAAGCCTCAATGTAAAGCTGCATTGCAGAAGGAACTTGGTTTACCAGTTCGTGATGATGTCCCACTGATTGGTTTCATTGGGAGGCTTGACCCACAAAAGGGTGTTGATCTGATTGCTGAGGCAGTGCCTTGGATGATGGGTCAGGATGTACAACTGGTCATGTTGGGTACGGGGAGGCCTGACCTTGAACAGATGCTAAGGCAATTTGAGTGTCAACACAATGATAAAATTAGAGGATGGGTTGGTTTCTCTGTGAAGACTTCTCATCGTATAACTGCTGGTGCAGACATTCTGCTCATGCCTTCTAGATTTGAGCCTTGTGGACTGAACCAGCTTTATGCAATGACATATGGGACTATTCCTGTTGTTCATGCAGTAGGAGGACTCAGAGATACTGTGCAGCCCTTTGATCCTTTTAATGAGTCAGGACTGGGGTGGACCTTCAGTAGGGCTGAAGCTAACCAGCTGATCCACGCATTAGGAAATTGCTTGCTGACTTATCGTGAGTACAAAAAGAGTTGGGAGGGGATTCAGACGCGTTGTATGACACAAGACTTAAGTTGGGATAATGCTGCTCAGAACTATGAAGAAGTTCTCATTGCTGCTAAGTATCAGTGGTGAGGTTCATTACTTGTAGATATTTGGGGGTTTTATCAAGTTCCAATGATGGCATTTCAGAGACATGTTACTGGTATCGCCACGAGAGGATGCAACAAGTTGGTTAACTATCATACTACTACCACGTCAGGAATGATTGCCGCGCTTGATCATATAATCATGTATATACTCTATTTTGTTAGCAAAATGTAGTTACATGTTGCAATTTCTACTCTATATTTTTTGGAAGTTTTAGTTGTCAA : ACAAATCAAAAAA</gDNA_template>
            <first_frame> V  N  L  I  L  T  G  I  P  S  S  G  T  H  F  A  S  N  D  F  N  I  D  L  H  C  R  Y  L  L  V  F  L  F  T  I  E  Y  P  *  F  S  V  L  V  S  I  Q  L  G  F  L  Y  L  S  T  G  S  S  S  I  S  T  R  S  L  W  F  L  K  S  W  V  P  V  I  P  V  N  F  I  F  L  *  W  K  I  P  L  F  F  I  L  E  I  N  S  T  P  A  Y  P  F  S  H  L  G  P  K  S  Y  L  E  F  M  A  P  V  E  S  K  C  G  G  S  S  A  L  K  Q  Q  V  K  I  L  G  K  L  Q  V  L  M  N  R  M  M  P  Y  R  L  Q  L  K  R  A  K  R  F  *  P  C  N  R  T  Y  F  N  R :   L  Q  K  E  E  K  *  S  L  Q  *  K  A  V  L  P  M  L  L  V  L  M  M  V  G  V  V  A  Y  Q  M  L  I  S  L  T  W  I  K  I  I  M  L  L  Y  L  V  L  L  L  L  Q  L  L  M  S  I  K  I  H  R  L  L  *  A  K  I  L  L  K  V  K  E  K  S  K  G  T  W  P  M  K  G  H  P  H  F  Q  D  H  P  S  Q  P  V  A  R  L  P  L  L  *  V  P  K  E  Y  *  M  S  L  Q  K  L  R  S  S  V  K  R  H  F  *  M  *  I  R  V  K  V  *  S  M  F  L  E  R  R  S  S  L  I  C  L  H  Y  V  K  N  P  Q  H  N  P  L  W  K  R  G  M  K  I  L  K  D  Q  V  L  R  Q  T  K  R  L  K  I  L  *  I  *  M  R  N  L  L  H  W  P  E  Q  M  L  *  T  L  F  W  W  L  Q  N  A  L  H  G  L  K  Q  :  V  G  L  E  M  L  L  E  H  Y  R  K  L  W  L  D  V  A  T  E  L  W :   L  W  H  L  V  M  T  T  I  L  N  L  K  I  L  V  *  E  K  F  I  K  F  M  V  R :   M  *  K  *  L  T  S  K  L  L  L  M  V  W  I  L  F  S  L  T  A  I  C  L  D  T  L  G  T  T  F  T  E  G  T  V  W :   I  F  *  S  A  W  F  Y  F  A  K  Q  R  L  R :   F  L  G  M  F  H  V  V  G  S  A  M  E  M  E  T  *  C  S  L  L  M  I  G  I  L  L  Y  C  Q  Y  I  *  K  L  I  I  V  T  M  E  L  *  T  I  Q  D  L  S  W  *  F  I  T  S  L  I  R :   V  V  V  L  W  R  I  F  H  M  *  I  F  H  H  T  I  W  T  L  S  N  C  M  T  Q  *  E  V  S  I  S  T  F  L  R  L  V  *  R  Q  Q  I  V  *  L  Q  L  V  M  D  I  H  G  N  S  R  L  P  K  V  V  G  D  C  I  R  *  L  M  R  T  I  G  N  Y  G  V  L  *  M  G  L  I  Q  K  S  G  T  L  S  W  T  F  T  Y  S  Q  M  V  T  *  T  T  P  W  T  H  C  R  L  A  S  L  N  V  K  L  H  C  R  R  N  L  V  Y  Q  F  V  M  M  S  H  *  L  V  S  L  G  G  L  T  H  K  R  V  L  I  *  L  L  R  Q  C  L  G  *  W  V  R  M  Y  N  W  S  C  W  V  R  G  G  L  T  L  N  R  C  *  G  N  L  S  V  N  T  M  I  K  L  E  D  G  L  V  S  L  *  R  L  L  I  V  *  L  L  V  Q  T  F  C  S  C  L  L  D  L  S  L  V  D  *  T  S  F  M  Q  *  H  M  G  L  F  L  L  F  M  Q  *  E  D  S  E  I  L  C  S  P  L  I  L  L  M  S  Q  D  W  G  G  P  S  V  G  L  K  L  T  S  *  S  T  H  *  E  I  A  C  *  L  I  V  S  T  K  R  V  G  R  G  F  R  R  V  V  *  H  K  T  *  V  G  I  M  L  L  R  T  M  K  K  F  S  L  L  L  S  I  S  G  E  V  H  Y  L  *  I  F  G  G  F  I  K  F  Q  *  W  H  F  R  D  M  L  L  V  S  P  R  E  D  A  T  S  W  L  T  I  I  L  L  P  R  Q  E  *  L  P  R  L  I  I  *  S  C  I  Y  S  I  L  L  A  K  C  S  Y  M  L  Q  F  L  L  Y  I  F  W  K  F  *  L  S   : N  K  S  K   </first_frame>
            <second_frame>  *  I  *  S  S  Q  G  S  L  L  R  G  P  I  L  H  Q  T  I  S  T  L  T  S  I  V  V  T  C  W  F  F  F  S  Q  S  N  T  P  N  S  L  Y  *  S  L  F  N  W  V  F  Y  T  C  Q  L  G  R  L  L  F  P  L  G  H  S  G  S  *  N  L  G  F  L  L  S  L  *  T  S  S  F  C  N  G  K  F  H  C  S  S  Y  W  K  S  I  P  P  Q  L  T  L  F  L  I  *  A  Q  K  V  I  S  N  S  W  L  Q  *  R  A  N  V  E  D  Q  A  R  *  S  N  R  *  K  F  W  G  S  C  K  C  *  *  I  G  *  C  L  T  G  Y  N  *  K  E  Q  K  G  F  S  H  A  T  G  P  T  S  T   : D  C  R  K  K  K  S  S  L  F  N  K  K  Q  S  C  R  C  Y  W  Y  L  *  W  W  E  W  *  L  I  R  C  *  Y  P  *  R  G  *  R  L  *  C  Y  C  T  *  Y  C  C  Y  S  N  Y  *  C  R  *  K  Y  T  A  C  Y  K  P  R  F  C  *  K  *  K  R  S  Q  K  G  P  G  R  *  K  G  T  P  T  F  K  I  I  H  H  S  Q  *  P  D  F  L  Y  C  K  F  Q  K  N  I  E  C  P  S  R  N  S  E  V  Q  S  R  D  T  F  E  C  E  F  A  *  K  F  S  R  C  S  W  K  E  D  P  V  L  Y  A  F  I  M  *  R  I  L  S  T  I  P  C  G  K  E  E  *  K  S  *  R  I  K  C  *  G  K  R  R  D  *  R  S  C  E  Y  R  *  E  T  S  S  I  G  R  N  K  C  Y  E  H  Y  F  G  G  F  R  M  R  S  M  V  *  N  R :   W  A  W  R  C  C  W  S  I  T  E  S  F  G  S  T  W  P  Q  S  Y   : G  C  G  T  S  L  *  Q  L  S  *  T  S  R  F  W  C  K  K  N  L  *  S  S  W  S   : G  C  R  S  D  L  L  P  S  F  Y  *  W  C  G  F  C  F  H  *  Q  P  Y  V  *  T  H  W  E  Q  H  L  R  R  E  P  C   : G  Y  F  K  A  H  G  F  I  L  Q  S  S  D  *   : G  S  L  A  C  S  M  W  W  G  L  L  W  R  W  K  L  S  V  H  C  *  *  L  A  Y  C  F  I  A  S  I  S  E  S  L  L  S  *  Q  W  N  Y  E  L  Y  K  I  C  P  G  D  S  *  H  R  S  S   : G  S  W  S  F  G  G  F  F  I  C  R  S  S  T  T  L  Y  G  P  F  Q  I  V  *  P  S  R  R  *  A  F  Q  H  F  C  G  W  S  K  D  S  R  S  C  S  Y  S  *  S  W  I  F  M  G  T  Q  D  F  R  R  W  L  G  I  A  S  D  N  *  *  E  R  L  E  I  T  G  Y  C  E  W  D  *  Y  K  R  V  E  P  *  V  G  R  S  L  T  V  R  W  L  R  E  L  L  L  G  H  T  A  D  W  Q  A  S  M  *  S  C  I  A  E  G  T  W  F  T  S  S  *  *  C  P  T  D  W  F  H  W  E  A  *  P  T  K  G  C  *  S  D  C  *  G  S  A  L  D  D  G  S  G  C  T  T  G  H  V  G  Y  G  E  A  *  P  *  T  D  A  K  A  I  *  V  S  T  Q  *  *  N  *  R  M  G  W  F  L  C  E  D  F  S  S  Y  N  C  W  C  R  H  S  A  H  A  F  *  I  *  A  L  W  T  E  P  A  L  C  N  D  I  W  D  Y  S  C  C  S  C  S  R  R  T  Q  R  Y  C  A  A  L  *  S  F  *  *  V  R  T  G  V  D  L  Q  *  G  *  S  *  P  A  D  P  R  I  R  K  L  L  A  D  L  S  *  V  Q  K  E  L  G  G  D  S  D  A  L  Y  D  T  R  L  K  L  G  *  C  C  S  E  L  *  R  S  S  H  C  C  *  V  S  V  V  R  F  I  T  C  R  Y  L  G  V  L  S  S  S  N  D  G  I  S  E  T  C  Y  W  Y  R  H  E  R  M  Q  Q  V  G  *  L  S  Y  Y  Y  H  V  R  N  D  C  R  A  *  S  Y  N  H  V  Y  T  L  F  C  *  Q  N  V  V  T  C  C  N  F  Y  S  I  F  F  G  S  F  S  C  Q  :  T  N  Q  K  </second_frame>
            <third_frame>   E  S  N  P  H  R  D  P  F  F  G  D  P  F  C  I  K  R  F  Q  H  *  P  P  L  S  L  L  V  G  F  S  F  H  N  R  I  P  L  I  L  C  T  S  L  Y  S  I  G  F  S  I  L  V  N  W  V  V  F  Y  F  H  *  V  T  L  V  L  E  I  L  G  S  C  Y  P  C  E  L  H  L  S  V  M  E  N  S  I  V  L  H  T  G  N  Q  F  H  P  S  L  P  F  F  S  F  R  P  K  K  L  S  R  I  H  G  S  S  R  E  Q  M  W  R  I  K  R  V  K  A  T  G  E  N  S  G  E  A  A  S  A  D  E  S  D  D  A  L  Q  V  T  I  E  K  S  K  K  V  L  A  M  Q  Q  D  L  L  Q  Q  :  I  A  E  R  R  K  V  V  S  S  I  K  S  S  L  A  D  A  T  G  T  Y  D  G  G  S  G  S  L  S  D  V  D  I  P  D  V  D  K  D  Y  N  V  T  V  P  S  T  A  A  T  P  I  T  D  V  D  K  N  T  P  P  A  I  S  Q  D  F  V  E  S  K  R  E  V  K  R  D  L  A  D  E  R  A  P  P  L  S  R  S  S  I  T  A  S  S  Q  T  S  S  T  V  S  S  K  R  I  L  N  V  P  P  E  T  P  K  F  S  Q  E  T  L  L  N  V  N  S  R  K  S  L  V  D  V  P  G  K  K  I  Q  S  Y  M  P  S  L  C  K  E  S  S  A  Q  S  L  V  E  K  R  N  E  N  L  E  G  S  S  A  E  A  N  E  E  T  E  D  L  V  N  I  D  E  K  P  P  P  L  A  G  T  N  V  M  N  I  I  L  V  A  S  E  C  A  P  W  S  K  T   : G  G  L  G  D  V  A  G  A  L  P  K  A  L  A  R  R  G  H  R  V  M  :  V  V  A  P  R  Y  D  N  Y  P  E  P  Q  D  S  G  V  R  K  I  Y  K  V  H  G  Q  :  D  V  E  V  T  Y  F  Q  A  F  I  D  G  V  D  F  V  F  I  D  S  H  M  F  R  H  I  G  N  N  I  Y  G  G  N  R  V  :  D  I  L  K  R  M  V  L  F  C  K  A  A  I  E  :  V  P  W  H  V  P  C  G  G  V  C  Y  G  D  G  N  L  V  F  I  A  N  D  W  H  T  A  L  L  P  V  Y  L  K  A  Y  Y  R  D  N  G  I  M  N  Y  T  R  S  V  L  V  I  H  N  I  A  H  Q  :  G  R  G  P  L  E  D  F  S  Y  V  D  L  P  P  H  Y  M  D  P  F  K  L  Y  D  P  V  G  G  E  H  F  N  I  F  A  A  G  L  K  T  A  D  R  V  V  T  V  S  H  G  Y  S  W  E  L  K  T  S  E  G  G  W  G  L  H  Q  I  I  N  E  N  D  W  K  L  R  G  I  V  N  G  I  D  T  K  E  W  N  P  E  L  D  V  H  L  Q  S  D  G  Y  V  N  Y  S  L  D  T  L  Q  T  G  K  P  Q  C  K  A  A  L  Q  K  E  L  G  L  P  V  R  D  D  V  P  L  I  G  F  I  G  R  L  D  P  Q  K  G  V  D  L  I  A  E  A  V  P  W  M  M  G  Q  D  V  Q  L  V  M  L  G  T  G  R  P  D  L  E  Q  M  L  R  Q  F  E  C  Q  H  N  D  K  I  R  G  W  V  G  F  S  V  K  T  S  H  R  I  T  A  G  A  D  I  L  L  M  P  S  R  F  E  P  C  G  L  N  Q  L  Y  A  M  T  Y  G  T  I  P  V  V  H  A  V  G  G  L  R  D  T  V  Q  P  F  D  P  F  N  E  S  G  L  G  W  T  F  S  R  A  E  A  N  Q  L  I  H  A  L  G  N  C  L  L  T  Y  R  E  Y  K  K  S  W  E  G  I  Q  T  R  C  M  T  Q  D  L  S  W  D  N  A  A  Q  N  Y  E  E  V  L  I  A  A  K  Y  Q  W  *  G  S  L  L  V  D  I  W  G  F  Y  Q  V  P  M  M  A  F  Q  R  H  V  T  G  I  A  T  R  G  C  N  K  L  V  N  Y  H  T  T  T  T  S  G  M  I  A  A  L  D  H  I  I  M  Y  I  L  Y  F  V  S  K  M  *  L  H  V  A  I  S  T  L  Y  F  L  E  V  L  V  V  K :   Q  I  K  K </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0054K23.1" strand="+"/>
                <serials PGL_serial="4" AGS_serial="4" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="15949" stop="16260"/>
                    <exon start="16780" stop="17404"/>
                    <exon start="18076" stop="18140"/>
                    <exon start="18542" stop="18619"/>
                    <exon start="18723" stop="18833"/>
                    <exon start="19277" stop="19321"/>
                    <exon start="19589" stop="19762"/>
                    <exon start="20908" stop="21864"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>2364</number_coding_nucleotides>
                  <number_encoded_amino_acids>788</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VTLVLEILGSCYPCELHLSVMENSIVLHTGNQFHPSLPFFSFRPKKLSRIHGSSREQMWRIKRVKATGENSGEAASADESDDALQVTIEKSKKVLAMQQDLLQQIAERRKVVSSIKSSLADATGTYDGGSGSLSDVDIPDVDKDYNVTVPSTAATPITDVDKNTPPAISQDFVESKREVKRDLADERAPPLSRSSITASSQTSSTVSSKRILNVPPETPKFSQETLLNVNSRKSLVDVPGKKIQSYMPSLCKESSAQSLVEKRNENLEGSSAEANEETEDLVNIDEKPPPLAGTNVMNIILVASECAPWSKTGGLGDVAGALPKALARRGHRVMVVAPRYDNYPEPQDSGVRKIYKVHGQDVEVTYFQAFIDGVDFVFIDSHMFRHIGNNIYGGNRVDILKRMVLFCKAAIEVPWHVPCGGVCYGDGNLVFIANDWHTALLPVYLKAYYRDNGIMNYTRSVLVIHNIAHQGRGPLEDFSYVDLPPHYMDPFKLYDPVGGEHFNIFAAGLKTADRVVTVSHGYSWELKTSEGGWGLHQIINENDWKLRGIVNGIDTKEWNPELDVHLQSDGYVNYSLDTLQTGKPQCKAALQKELGLPVRDDVPLIGFIGRLDPQKGVDLIAEAVPWMMGQDVQLVMLGTGRPDLEQMLRQFECQHNDKIRGWVGFSVKTSHRITAGADILLMPSRFEPCGLNQLYAMTYGTIPVVHAVGGLRDTVQPFDPFNESGLGWTFSRAEANQLIHALGNCLLTYREYKKSWEGIQTRCMTQDLSWDNAAQNYEEVLIAAKYQW*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="5">
          <exon_coordinates>
            <exon e_start="20900" e_stop="22183"/>
            <exon e_start="22956" e_stop="22971"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.666" e_score="0.994"/>
          <exon-only e_score="0.688"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.994">
            <gDNA_exon_boundary e_start="20900" e_stop="22183" e_length="1284"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.666">
            <gDNA_intron_boundary i_start="22184" i_stop="22955" i_length="772"/>
          </intron>
          <exon e_serial="2" e_score="0.688">
            <gDNA_exon_boundary e_start="22956" e_stop="22971" e_length="16"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20900" stop="21054"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E624661" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20908" stop="21466"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E564795" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21050" stop="21541"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E318941" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21182" stop="21895"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E589586" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21214" stop="21878"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E333060" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21214" stop="21745"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E334644" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21214" stop="21739"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E333394" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21355" stop="21917"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E328810" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21425" stop="22118"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E379790" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21484" stop="22070"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E589890" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21575" stop="22065"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E419352" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21597" stop="21933"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E242138" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21799" stop="22183"/>
              <exon start="22956" stop="22971"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E230032" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21947" stop="22183"/>
              <exon start="22956" stop="22971"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E230105" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="5" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCATGCAGGGTCGTGGTCCTTTGGAGGATTTTTCATATGTAGATCTTCCACCACACTATATGGACCCTTTCAAATTGTATGACCCAGTAGGAGGTGAGCATTTCAACATTTTTGCGGCTGGTCTAAAGACAGCAGATCGTGTAGTTACAGTTAGTCATGGATATTCATGGGAACTCAAGACTTCCGAAGGTGGTTGGGGATTGCATCAGATAATTAATGAGAACGATTGGAAATTACGGGGTATTGTGAATGGGATTGATACAAAAGAGTGGAACCCTGAGTTGGACGTTCACTTACAGTCAGATGGTTACGTGAACTACTCCTTGGACACACTGCAGACTGGCAAGCCTCAATGTAAAGCTGCATTGCAGAAGGAACTTGGTTTACCAGTTCGTGATGATGTCCCACTGATTGGTTTCATTGGGAGGCTTGACCCACAAAAGGGTGTTGATCTGATTGCTGAGGCAGTGCCTTGGATGATGGGTCAGGATGTACAACTGGTCATGTTGGGTACGGGGAGGCCTGACCTTGAACAGATGCTAAGGCAATTTGAGTGTCAACACAATGATAAAATTAGAGGATGGGTTGGTTTCTCTGTGAAGACTTCTCATCGTATAACTGCTGGTGCAGACATTCTGCTCATGCCTTCTAGATTTGAGCCTTGTGGACTGAACCAGCTTTATGCAATGACATATGGGACTATTCCTGTTGTTCATGCAGTAGGAGGACTCAGAGATACTGTGCAGCCCTTTGATCCTTTTAATGAGTCAGGACTGGGGTGGACCTTCAGTAGGGCTGAAGCTAACCAGCTGATCCACGCATTAGGAAATTGCTTGCTGACTTATCGTGAGTACAAAAAGAGTTGGGAGGGGATTCAGACGCGTTGTATGACACAAGACTTAAGTTGGGATAATGCTGCTCAGAACTATGAAGAAGTTCTCATTGCTGCTAAGTATCAGTGGTGAGGTTCATTACTTGTAGATATTTGGGGGTTTTATCAAGTTCCAATGATGGCATTTCAGAGACATGTTACTGGTATCGCCACGAGAGGATGCAACAAGTTGGTTAACTATCATACTACTACCACGTCAGGAATGATTGCCGCGCTTGATCATATAATCATGTATATACTCTATTTTGTTAGCAAAATGTAGTTACATGTTGCAATTTCTACTCTATATTTTTTGGAAGTTTTAGTTGTCAAATAATCAGCCACCTCAATTTTTGTTTAGATGTATTCTCTCTCAATAATAAAATTGACCGACTCATCTAAACCACAATCAA : ACAAATCAAAAAAGGA</gDNA_template>
            <first_frame> S  C  R  V  V  V  L  W  R  I  F  H  M  *  I  F  H  H  T  I  W  T  L  S  N  C  M  T  Q  *  E  V  S  I  S  T  F  L  R  L  V  *  R  Q  Q  I  V  *  L  Q  L  V  M  D  I  H  G  N  S  R  L  P  K  V  V  G  D  C  I  R  *  L  M  R  T  I  G  N  Y  G  V  L  *  M  G  L  I  Q  K  S  G  T  L  S  W  T  F  T  Y  S  Q  M  V  T  *  T  T  P  W  T  H  C  R  L  A  S  L  N  V  K  L  H  C  R  R  N  L  V  Y  Q  F  V  M  M  S  H  *  L  V  S  L  G  G  L  T  H  K  R  V  L  I  *  L  L  R  Q  C  L  G  *  W  V  R  M  Y  N  W  S  C  W  V  R  G  G  L  T  L  N  R  C  *  G  N  L  S  V  N  T  M  I  K  L  E  D  G  L  V  S  L  *  R  L  L  I  V  *  L  L  V  Q  T  F  C  S  C  L  L  D  L  S  L  V  D  *  T  S  F  M  Q  *  H  M  G  L  F  L  L  F  M  Q  *  E  D  S  E  I  L  C  S  P  L  I  L  L  M  S  Q  D  W  G  G  P  S  V  G  L  K  L  T  S  *  S  T  H  *  E  I  A  C  *  L  I  V  S  T  K  R  V  G  R  G  F  R  R  V  V  *  H  K  T  *  V  G  I  M  L  L  R  T  M  K  K  F  S  L  L  L  S  I  S  G  E  V  H  Y  L  *  I  F  G  G  F  I  K  F  Q  *  W  H  F  R  D  M  L  L  V  S  P  R  E  D  A  T  S  W  L  T  I  I  L  L  P  R  Q  E  *  L  P  R  L  I  I  *  S  C  I  Y  S  I  L  L  A  K  C  S  Y  M  L  Q  F  L  L  Y  I  F  W  K  F  *  L  S  N  N  Q  P  P  Q  F  L  F  R  C  I  L  S  Q  *  *  N  *  P  T  H  L  N  H  N  Q  :  T  N  Q  K  R  </first_frame>
            <second_frame>  H  A  G  S  W  S  F  G  G  F  F  I  C  R  S  S  T  T  L  Y  G  P  F  Q  I  V  *  P  S  R  R  *  A  F  Q  H  F  C  G  W  S  K  D  S  R  S  C  S  Y  S  *  S  W  I  F  M  G  T  Q  D  F  R  R  W  L  G  I  A  S  D  N  *  *  E  R  L  E  I  T  G  Y  C  E  W  D  *  Y  K  R  V  E  P  *  V  G  R  S  L  T  V  R  W  L  R  E  L  L  L  G  H  T  A  D  W  Q  A  S  M  *  S  C  I  A  E  G  T  W  F  T  S  S  *  *  C  P  T  D  W  F  H  W  E  A  *  P  T  K  G  C  *  S  D  C  *  G  S  A  L  D  D  G  S  G  C  T  T  G  H  V  G  Y  G  E  A  *  P  *  T  D  A  K  A  I  *  V  S  T  Q  *  *  N  *  R  M  G  W  F  L  C  E  D  F  S  S  Y  N  C  W  C  R  H  S  A  H  A  F  *  I  *  A  L  W  T  E  P  A  L  C  N  D  I  W  D  Y  S  C  C  S  C  S  R  R  T  Q  R  Y  C  A  A  L  *  S  F  *  *  V  R  T  G  V  D  L  Q  *  G  *  S  *  P  A  D  P  R  I  R  K  L  L  A  D  L  S  *  V  Q  K  E  L  G  G  D  S  D  A  L  Y  D  T  R  L  K  L  G  *  C  C  S  E  L  *  R  S  S  H  C  C  *  V  S  V  V  R  F  I  T  C  R  Y  L  G  V  L  S  S  S  N  D  G  I  S  E  T  C  Y  W  Y  R  H  E  R  M  Q  Q  V  G  *  L  S  Y  Y  Y  H  V  R  N  D  C  R  A  *  S  Y  N  H  V  Y  T  L  F  C  *  Q  N  V  V  T  C  C  N  F  Y  S  I  F  F  G  S  F  S  C  Q  I  I  S  H  L  N  F  C  L  D  V  F  S  L  N  N  K  I  D  R  L  I  *  T  T  I  K :   Q  I  K  K  G </second_frame>
            <third_frame>   M  Q  G  R  G  P  L  E  D  F  S  Y  V  D  L  P  P  H  Y  M  D  P  F  K  L  Y  D  P  V  G  G  E  H  F  N  I  F  A  A  G  L  K  T  A  D  R  V  V  T  V  S  H  G  Y  S  W  E  L  K  T  S  E  G  G  W  G  L  H  Q  I  I  N  E  N  D  W  K  L  R  G  I  V  N  G  I  D  T  K  E  W  N  P  E  L  D  V  H  L  Q  S  D  G  Y  V  N  Y  S  L  D  T  L  Q  T  G  K  P  Q  C  K  A  A  L  Q  K  E  L  G  L  P  V  R  D  D  V  P  L  I  G  F  I  G  R  L  D  P  Q  K  G  V  D  L  I  A  E  A  V  P  W  M  M  G  Q  D  V  Q  L  V  M  L  G  T  G  R  P  D  L  E  Q  M  L  R  Q  F  E  C  Q  H  N  D  K  I  R  G  W  V  G  F  S  V  K  T  S  H  R  I  T  A  G  A  D  I  L  L  M  P  S  R  F  E  P  C  G  L  N  Q  L  Y  A  M  T  Y  G  T  I  P  V  V  H  A  V  G  G  L  R  D  T  V  Q  P  F  D  P  F  N  E  S  G  L  G  W  T  F  S  R  A  E  A  N  Q  L  I  H  A  L  G  N  C  L  L  T  Y  R  E  Y  K  K  S  W  E  G  I  Q  T  R  C  M  T  Q  D  L  S  W  D  N  A  A  Q  N  Y  E  E  V  L  I  A  A  K  Y  Q  W  *  G  S  L  L  V  D  I  W  G  F  Y  Q  V  P  M  M  A  F  Q  R  H  V  T  G  I  A  T  R  G  C  N  K  L  V  N  Y  H  T  T  T  T  S  G  M  I  A  A  L  D  H  I  I  M  Y  I  L  Y  F  V  S  K  M  *  L  H  V  A  I  S  T  L  Y  F  L  E  V  L  V  V  K  *  S  A  T  S  I  F  V  *  M  Y  S  L  S  I  I  K  L  T  D  S  S  K  P  Q  S   : N  K  S  K  K   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0054K23.1" strand="+"/>
                <serials PGL_serial="4" AGS_serial="5" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="20902" stop="21864"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>960</number_coding_nucleotides>
                  <number_encoded_amino_acids>320</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>MQGRGPLEDFSYVDLPPHYMDPFKLYDPVGGEHFNIFAAGLKTADRVVTVSHGYSWELKTSEGGWGLHQIINENDWKLRGIVNGIDTKEWNPELDVHLQSDGYVNYSLDTLQTGKPQCKAALQKELGLPVRDDVPLIGFIGRLDPQKGVDLIAEAVPWMMGQDVQLVMLGTGRPDLEQMLRQFECQHNDKIRGWVGFSVKTSHRITAGADILLMPSRFEPCGLNQLYAMTYGTIPVVHAVGGLRDTVQPFDPFNESGLGWTFSRAEANQLIHALGNCLLTYREYKKSWEGIQTRCMTQDLSWDNAAQNYEEVLIAAKYQW*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="-" PGL_start="23914" PGL_stop="23422"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="23914" e_stop="23422"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.909"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.909">
            <gDNA_exon_boundary e_start="23914" e_stop="23422" e_length="493"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23914" stop="23422"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E572868" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAAATTCACTTCATCGGCCGGAATTTCTATCGTCAGCGACACTAAAAGCTGCCGGAAGAAAAAAAATGCCTATTCTACCCTTGCACTCTCTCATTTTCAACGTTAAAACCACTGTTAAATCCTATTGTTTCATTTCTTTCTTCTTCTTCTTCAATCTCAACCTCTAGATTTAGAAAGCTTTCACAATTTTCAATTCGTTCATCATTCAATGATACTCCGGATTTTTTTTGTACCAAAACTCAAGCAAAACGAAGATGATTCTGATGATAAAACATTCTCATTTGTTTATGAATGGGGCGAGAGGTCGAAACCAGAGCTCCGACCCATGACGTAGTTATCGGAAGCCGGACCCTCCTATTGACTAGATGAATGGGGTAGAGCTGAGCTAGGGATCAACAACTCTTCAGGGATTGAAGATGAGTGGGGTGAGAAGTCGTTTCCGGAGCTTCGACCCGCGAAAATGACATCGGCTTCGGATCCTCCTATCGACGAA</gDNA_template>
            <first_frame> K  I  H  F  I  G  R  N  F  Y  R  Q  R  H  *  K  L  P  E  E  K  K  C  L  F  Y  P  C  T  L  S  F  S  T  L  K  P  L  L  N  P  I  V  S  F  L  S  S  S  S  S  I  S  T  S  R  F  R  K  L  S  Q  F  S  I  R  S  S  F  N  D  T  P  D  F  F  C  T  K  T  Q  A  K  R  R  *  F  *  *  *  N  I  L  I  C  L  *  M  G  R  E  V  E  T  R  A  P  T  H  D  V  V  I  G  S  R  T  L  L  L  T  R  *  M  G  *  S  *  A  R  D  Q  Q  L  F  R  D  *  R  *  V  G  *  E  V  V  S  G  A  S  T  R  E  N  D  I  G  F  G  S  S  Y  R  R  </first_frame>
            <second_frame>  K  F  T  S  S  A  G  I  S  I  V  S  D  T  K  S  C  R  K  K  K  N  A  Y  S  T  L  A  L  S  H  F  Q  R  *  N  H  C  *  I  L  L  F  H  F  F  L  L  L  L  Q  S  Q  P  L  D  L  E  S  F  H  N  F  Q  F  V  H  H  S  M  I  L  R  I  F  F  V  P  K  L  K  Q  N  E  D  D  S  D  D  K  T  F  S  F  V  Y  E  W  G  E  R  S  K  P  E  L  R  P  M  T  *  L  S  E  A  G  P  S  Y  *  L  D  E  W  G  R  A  E  L  G  I  N  N  S  S  G  I  E  D  E  W  G  E  K  S  F  P  E  L  R  P  A  K  M  T  S  A  S  D  P  P  I  D  E </second_frame>
            <third_frame>   N  S  L  H  R  P  E  F  L  S  S  A  T  L  K  A  A  G  R  K  K  M  P  I  L  P  L  H  S  L  I  F  N  V  K  T  T  V  K  S  Y  C  F  I  S  F  F  F  F  F  N  L  N  L  *  I  *  K  A  F  T  I  F  N  S  F  I  I  Q  *  Y  S  G  F  F  L  Y  Q  N  S  S  K  T  K  M  I  L  M  I  K  H  S  H  L  F  M  N  G  A  R  G  R  N  Q  S  S  D  P  *  R  S  Y  R  K  P  D  P  P  I  D  *  M  N  G  V  E  L  S  *  G  S  T  T  L  Q  G  L  K  M  S  G  V  R  S  R  F  R  S  F  D  P  R  K  *  H  R  L  R  I  L  L  S  T   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0054K23.1" strand="-"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="23796" stop="23581"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>213</number_coding_nucleotides>
                  <number_encoded_amino_acids>71</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ILLFHFFLLLLQSQPLDLESFHNFQFVHHSMILRIFFVPKLKQNEDDSDDKTFSFVYEWGERSKPELRPMT*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0054K23.1" strand="-"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="23869" stop="23657"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>210</number_coding_nucleotides>
                  <number_encoded_amino_acids>70</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KLPEEKKCLFYPCTLSFSTLKPLLNPIVSFLSSSSSISTSRFRKLSQFSIRSSFNDTPDFFCTKTQAKRR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="-" PGL_start="29621" PGL_stop="24666"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="29621" e_stop="29380"/>
            <exon e_start="29019" e_stop="28891"/>
            <exon e_start="28292" e_stop="28241"/>
            <exon e_start="28094" e_stop="28019"/>
            <exon e_start="27905" e_stop="27823"/>
            <exon e_start="26880" e_stop="26784"/>
            <exon e_start="25975" e_stop="25930"/>
            <exon e_start="25305" e_stop="25220"/>
            <exon e_start="25140" e_stop="24666"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.985" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.679" e_score="1.000"/>
          <exon-intron don_prob="0.377" acc_prob="0.793" e_score="1.000"/>
          <exon-intron don_prob="0.806" acc_prob="0.687" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.809" e_score="1.000"/>
          <exon-intron don_prob="0.985" acc_prob="0.984" e_score="1.000"/>
          <exon-intron don_prob="0.859" acc_prob="0.777" e_score="1.000"/>
          <exon-intron don_prob="0.596" acc_prob="0.998" e_score="1.000"/>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="29621" e_stop="29380" e_length="242"/>
          </exon>
          <intron i_serial="1" don_prob="0.985" acc_prob="1.000">
            <gDNA_intron_boundary i_start="29379" i_stop="29020" i_length="360"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="29019" e_stop="28891" e_length="129"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.679">
            <gDNA_intron_boundary i_start="28890" i_stop="28293" i_length="598"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="28292" e_stop="28241" e_length="52"/>
          </exon>
          <intron i_serial="3" don_prob="0.377" acc_prob="0.793">
            <gDNA_intron_boundary i_start="28240" i_stop="28095" i_length="146"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="28094" e_stop="28019" e_length="76"/>
          </exon>
          <intron i_serial="4" don_prob="0.806" acc_prob="0.687">
            <gDNA_intron_boundary i_start="28018" i_stop="27906" i_length="113"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="27905" e_stop="27823" e_length="83"/>
          </exon>
          <intron i_serial="5" don_prob="0.999" acc_prob="0.809">
            <gDNA_intron_boundary i_start="27822" i_stop="26881" i_length="942"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="26880" e_stop="26784" e_length="97"/>
          </exon>
          <intron i_serial="6" don_prob="0.985" acc_prob="0.984">
            <gDNA_intron_boundary i_start="26783" i_stop="25976" i_length="808"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="25975" e_stop="25930" e_length="46"/>
          </exon>
          <intron i_serial="7" don_prob="0.859" acc_prob="0.777">
            <gDNA_intron_boundary i_start="25929" i_stop="25306" i_length="624"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="25305" e_stop="25220" e_length="86"/>
          </exon>
          <intron i_serial="8" don_prob="0.596" acc_prob="0.998">
            <gDNA_intron_boundary i_start="25219" i_stop="25141" i_length="79"/>
          </intron>
          <exon e_serial="9" e_score="0.996">
            <gDNA_exon_boundary e_start="25140" e_stop="24666" e_length="475"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29621" stop="29380"/>
              <exon start="29019" stop="28913"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E274219" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29619" stop="29380"/>
              <exon start="29019" stop="28891"/>
              <exon start="28292" stop="28241"/>
              <exon start="28094" stop="28019"/>
              <exon start="27905" stop="27823"/>
              <exon start="26880" stop="26802"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E390198" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29599" stop="29380"/>
              <exon start="29019" stop="28891"/>
              <exon start="28292" stop="28241"/>
              <exon start="28094" stop="28019"/>
              <exon start="27905" stop="27868"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E306666" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29509" stop="29380"/>
              <exon start="29019" stop="28891"/>
              <exon start="28292" stop="28241"/>
              <exon start="28094" stop="28019"/>
              <exon start="27905" stop="27823"/>
              <exon start="26880" stop="26784"/>
              <exon start="25975" stop="25930"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E576198" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26856" stop="26784"/>
              <exon start="25975" stop="25930"/>
              <exon start="25305" stop="25220"/>
              <exon start="25140" stop="24666"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E390404" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CACTTGGGACAAAAAATATTACTAGTATCAGAATATTCCGGTAACGTTGCAGATAAATTGTGCCCCAATTCAAAAGAAGCAAAATCAATCGATAACTGGAAAGAAAGCTCTGTGTTGCTATCTTTGAATTAGGGTTCTATATTACGAACCCTAAAATTCCAGTTCGTTCCTAATTCTTGTAGCCATGGACTCTCCCGCTGCAAATCACTTGGATATATTCGATATCTACGGCCGATACTGTG : ATATCATGTCAGGGGCATATGCTACCAGGAACCTAGTAGATGAATTGCAGAAAGCCAGATTTACAAGAGAGGCATTGAACCAGCTTATGAAATTAGTGGATTCAAGTTTGCATATAAGGCATGTATTTG : GGCGACTATCTTTGAAGAAGTGTACAAGCTTAAGTTGCGGTTGAATTTGGAG : GCAGACTTCTCTGAGTTCTCGCGTTTCTATGATTTTGTCTTCTTCGTTTTCAGAGAAAATGGACAAAAGAACATCA : CTATAAGTAAAGCTGTTACTGGTTGGAAAATAGTTTTAGCTGGAAGGTTTCGGCTACTTGATCACTGGTGCGACTTTGTTGAG : AAAAAACAGCGATATAATATATCTGAGGATACTTGGCAGCAAGTTTTGGCCTTCAGTCGTGCTGTGCATGAAAATCTTGAAGGATATGATCGGGAAG : GAGCTTGGCCTGTTTTGATTGATGATTTTGTTGAGCACATGTACAG : GGTTGGAGGAGTTGATACTATTTCTAACTCATTTTGTTGTAGCTGTGGTAATTCGGGAGCCCAGCCATTTGAGGATTCTTACCCTG : GATTGATAAATTTTCCTGGTATGAAGAGGAAATCTTGTGGCAATTTACAAAGAGTAGAAGAATCATCTCATGGAGATCCAGGCATGGATGTGATTGTCAATTCGAAGAGGAGGCACGTTAATTTTGGCAACCAAAATGTTGACTGGACAGAAAACCAGTCACATGGTTACTCGGAAATGGTTAAAGCAAATAGCCCATTAAATCATTCTGCATCTCCCTGCGCTGTTGAAGGTTGTTTGTCCAAGGGTTTTGCGGGACTGTTGTCAGGCCCTTCATGTTTGCAGTTTGATAAAGAAAGGAGAACTTCCTATACATAAGAAGGTTTTTGATCTTGTTCATTACTGCAATATATCAGAAAGTGGCATTTTTTATTTCCTGAAGTAGAACTGGGGATATGTAGGTTTGACATGAGGAAGTATTTTTTATTTTTGAAAAAAATTAAATTCGAACTGTAATCTTTCTGATGCTTCTTTAA</gDNA_template>
            <first_frame> H  L  G  Q  K  I  L  L  V  S  E  Y  S  G  N  V  A  D  K  L  C  P  N  S  K  E  A  K  S  I  D  N  W  K  E  S  S  V  L  L  S  L  N  *  G  S  I  L  R  T  L  K  F  Q  F  V  P  N  S  C  S  H  G  L  S  R  C  K  S  L  G  Y  I  R  Y  L  R  P  I  L  * :   Y  H  V  R  G  I  C  Y  Q  E  P  S  R  *  I  A  E  S  Q  I  Y  K  R  G  I  E  P  A  Y  E  I  S  G  F  K  F  A  Y  K  A  C  I  W :   A  T  I  F  E  E  V  Y  K  L  K  L  R  L  N  L  E  :  A  D  F  S  E  F  S  R  F  Y  D  F  V  F  F  V  F  R  E  N  G  Q  K  N  I   : T  I  S  K  A  V  T  G  W  K  I  V  L  A  G  R  F  R  L  L  D  H  W  C  D  F  V  E  :  K  K  Q  R  Y  N  I  S  E  D  T  W  Q  Q  V  L  A  F  S  R  A  V  H  E  N  L  E  G  Y  D  R  E   : G  A  W  P  V  L  I  D  D  F  V  E  H  M  Y  R :   V  G  G  V  D  T  I  S  N  S  F  C  C  S  C  G  N  S  G  A  Q  P  F  E  D  S  Y  P   : G  L  I  N  F  P  G  M  K  R  K  S  C  G  N  L  Q  R  V  E  E  S  S  H  G  D  P  G  M  D  V  I  V  N  S  K  R  R  H  V  N  F  G  N  Q  N  V  D  W  T  E  N  Q  S  H  G  Y  S  E  M  V  K  A  N  S  P  L  N  H  S  A  S  P  C  A  V  E  G  C  L  S  K  G  F  A  G  L  L  S  G  P  S  C  L  Q  F  D  K  E  R  R  T  S  Y  T  *  E  G  F  *  S  C  S  L  L  Q  Y  I  R  K  W  H  F  L  F  P  E  V  E  L  G  I  C  R  F  D  M  R  K  Y  F  L  F  L  K  K  I  K  F  E  L  *  S  F  *  C  F  F   </first_frame>
            <second_frame>  T  W  D  K  K  Y  Y  *  Y  Q  N  I  P  V  T  L  Q  I  N  C  A  P  I  Q  K  K  Q  N  Q  S  I  T  G  K  K  A  L  C  C  Y  L  *  I  R  V  L  Y  Y  E  P  *  N  S  S  S  F  L  I  L  V  A  M  D  S  P  A  A  N  H  L  D  I  F  D  I  Y  G  R  Y  C   : D  I  M  S  G  A  Y  A  T  R  N  L  V  D  E  L  Q  K  A  R  F  T  R  E  A  L  N  Q  L  M  K  L  V  D  S  S  L  H  I  R  H  V  F   : G  R  L  S  L  K  K  C  T  S  L  S  C  G  *  I  W  R :   Q  T  S  L  S  S  R  V  S  M  I  L  S  S  S  F  S  E  K  M  D  K  R  T  S  :  L  *  V  K  L  L  L  V  G  K  *  F  *  L  E  G  F  G  Y  L  I  T  G  A  T  L  L  R :   K  N  S  D  I  I  Y  L  R  I  L  G  S  K  F  W  P  S  V  V  L  C  M  K  I  L  K  D  M  I  G  K  :  E  L  G  L  F  *  L  M  I  L  L  S  T  C  T   : G  L  E  E  L  I  L  F  L  T  H  F  V  V  A  V  V  I  R  E  P  S  H  L  R  I  L  T  L  :  D  *  *  I  F  L  V  *  R  G  N  L  V  A  I  Y  K  E  *  K  N  H  L  M  E  I  Q  A  W  M  *  L  S  I  R  R  G  G  T  L  I  L  A  T  K  M  L  T  G  Q  K  T  S  H  M  V  T  R  K  W  L  K  Q  I  A  H  *  I  I  L  H  L  P  A  L  L  K  V  V  C  P  R  V  L  R  D  C  C  Q  A  L  H  V  C  S  L  I  K  K  G  E  L  P  I  H  K  K  V  F  D  L  V  H  Y  C  N  I  S  E  S  G  I  F  Y  F  L  K  *  N  W  G  Y  V  G  L  T  *  G  S  I  F  Y  F  *  K  K  L  N  S  N  C  N  L  S  D  A  S  L  </second_frame>
            <third_frame>   L  G  T  K  N  I  T  S  I  R  I  F  R  *  R  C  R  *  I  V  P  Q  F  K  R  S  K  I  N  R  *  L  E  R  K  L  C  V  A  I  F  E  L  G  F  Y  I  T  N  P  K  I  P  V  R  S  *  F  L  *  P  W  T  L  P  L  Q  I  T  W  I  Y  S  I  S  T  A  D  T  V  :  I  S  C  Q  G  H  M  L  P  G  T  *  *  M  N  C  R  K  P  D  L  Q  E  R  H  *  T  S  L  *  N  *  W  I  Q  V  C  I  *  G  M  Y  L  :  G  D  Y  L  *  R  S  V  Q  A  *  V  A  V  E  F  G   : G  R  L  L  *  V  L  A  F  L  *  F  C  L  L  R  F  Q  R  K  W  T  K  E  H  H :   Y  K  *  S  C  Y  W  L  E  N  S  F  S  W  K  V  S  A  T  *  S  L  V  R  L  C  *   : E  K  T  A  I  *  Y  I  *  G  Y  L  A  A  S  F  G  L  Q  S  C  C  A  *  K  S  *  R  I  *  S  G  R :   S  L  A  C  F  D  *  *  F  C  *  A  H  V  Q  :  G  W  R  S  *  Y  Y  F  *  L  I  L  L  *  L  W  *  F  G  S  P  A  I  *  G  F  L  P  W :   I  D  K  F  S  W  Y  E  E  E  I  L  W  Q  F  T  K  S  R  R  I  I  S  W  R  S  R  H  G  C  D  C  Q  F  E  E  E  A  R  *  F  W  Q  P  K  C  *  L  D  R  K  P  V  T  W  L  L  G  N  G  *  S  K  *  P  I  K  S  F  C  I  S  L  R  C  *  R  L  F  V  Q  G  F  C  G  T  V  V  R  P  F  M  F  A  V  *  *  R  K  E  N  F  L  Y  I  R  R  F  L  I  L  F  I  T  A  I  Y  Q  K  V  A  F  F  I  S  *  S  R  T  G  D  M  *  V  *  H  E  E  V  F  F  I  F  E  K  N  *  I  R  T  V  I  F  L  M  L  L  * </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0054K23.1" strand="-"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="28976" stop="28891"/>
                    <exon start="28292" stop="28241"/>
                    <exon start="28094" stop="28019"/>
                    <exon start="27905" stop="27823"/>
                    <exon start="26880" stop="26784"/>
                    <exon start="25975" stop="25930"/>
                    <exon start="25305" stop="25220"/>
                    <exon start="25140" stop="24824"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>840</number_coding_nucleotides>
                  <number_encoded_amino_acids>280</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IAESQIYKRGIEPAYEISGFKFAYKACIWATIFEEVYKLKLRLNLEADFSEFSRFYDFVFFVFRENGQKNITISKAVTGWKIVLAGRFRLLDHWCDFVEKKQRYNISEDTWQQVLAFSRAVHENLEGYDREGAWPVLIDDFVEHMYRVGGVDTISNSFCCSCGNSGAQPFEDSYPGLINFPGMKRKSCGNLQRVEESSHGDPGMDVIVNSKRRHVNFGNQNVDWTENQSHGYSEMVKANSPLNHSASPCAVEGCLSKGFAGLLSGPSCLQFDKERRTSYT*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="29621" e_stop="29380"/>
            <exon e_start="29019" e_stop="28902"/>
            <exon e_start="28550" e_stop="28540"/>
            <exon e_start="28292" e_stop="28243"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.985" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.693" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.679" e_score="0.545"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="29621" e_stop="29380" e_length="242"/>
          </exon>
          <intron i_serial="1" don_prob="0.985" acc_prob="1.000">
            <gDNA_intron_boundary i_start="29379" i_stop="29020" i_length="360"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="29019" e_stop="28902" e_length="118"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="0.693">
            <gDNA_intron_boundary i_start="28901" i_stop="28551" i_length="351"/>
          </intron>
          <exon e_serial="3" e_score="0.545">
            <gDNA_exon_boundary e_start="28550" e_stop="28540" e_length="11"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.679">
            <gDNA_intron_boundary i_start="28539" i_stop="28293" i_length="247"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="28292" e_stop="28243" e_length="50"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29621" stop="29380"/>
              <exon start="29019" stop="28913"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E274219" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29616" stop="29380"/>
              <exon start="29019" stop="28902"/>
              <exon start="28550" stop="28540"/>
              <exon start="28292" stop="28267"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E306600" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29551" stop="29380"/>
              <exon start="29019" stop="28902"/>
              <exon start="28550" stop="28540"/>
              <exon start="28292" stop="28243"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E306660" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CACTTGGGACAAAAAATATTACTAGTATCAGAATATTCCGGTAACGTTGCAGATAAATTGTGCCCCAATTCAAAAGAAGCAAAATCAATCGATAACTGGAAAGAAAGCTCTGTGTTGCTATCTTTGAATTAGGGTTCTATATTACGAACCCTAAAATTCCAGTTCGTTCCTAATTCTTGTAGCCATGGACTCTCCCGCTGCAAATCACTTGGATATATTCGATATCTACGGCCGATACTGTG : ATATCATGTCAGGGGCATATGCTACCAGGAACCTAGTAGATGAATTGCAGAAAGCCAGATTTACAAGAGAGGCATTGAACCAGCTTATGAAATTAGTGGATTCAAGTTTGCATATAAG : GAATATGTGTT : GGCGACTATCTTTGAAGAAGTGTACAAGCTTAAGTTGCGGTTGAATTTGG</gDNA_template>
            <first_frame> H  L  G  Q  K  I  L  L  V  S  E  Y  S  G  N  V  A  D  K  L  C  P  N  S  K  E  A  K  S  I  D  N  W  K  E  S  S  V  L  L  S  L  N  *  G  S  I  L  R  T  L  K  F  Q  F  V  P  N  S  C  S  H  G  L  S  R  C  K  S  L  G  Y  I  R  Y  L  R  P  I  L  * :   Y  H  V  R  G  I  C  Y  Q  E  P  S  R  *  I  A  E  S  Q  I  Y  K  R  G  I  E  P  A  Y  E  I  S  G  F  K  F  A  Y  K  :  E  Y  V  L :   A  T  I  F  E  E  V  Y  K  L  K  L  R  L  N  L  </first_frame>
            <second_frame>  T  W  D  K  K  Y  Y  *  Y  Q  N  I  P  V  T  L  Q  I  N  C  A  P  I  Q  K  K  Q  N  Q  S  I  T  G  K  K  A  L  C  C  Y  L  *  I  R  V  L  Y  Y  E  P  *  N  S  S  S  F  L  I  L  V  A  M  D  S  P  A  A  N  H  L  D  I  F  D  I  Y  G  R  Y  C   : D  I  M  S  G  A  Y  A  T  R  N  L  V  D  E  L  Q  K  A  R  F  T  R  E  A  L  N  Q  L  M  K  L  V  D  S  S  L  H  I  R :   N  M  C   : W  R  L  S  L  K  K  C  T  S  L  S  C  G  *  I  W </second_frame>
            <third_frame>   L  G  T  K  N  I  T  S  I  R  I  F  R  *  R  C  R  *  I  V  P  Q  F  K  R  S  K  I  N  R  *  L  E  R  K  L  C  V  A  I  F  E  L  G  F  Y  I  T  N  P  K  I  P  V  R  S  *  F  L  *  P  W  T  L  P  L  Q  I  T  W  I  Y  S  I  S  T  A  D  T  V  :  I  S  C  Q  G  H  M  L  P  G  T  *  *  M  N  C  R  K  P  D  L  Q  E  R  H  *  T  S  L  *  N  *  W  I  Q  V  C  I  *   : G  I  C  V  :  G  D  Y  L  *  R  S  V  Q  A  *  V  A  V  E  F   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0054K23.1" strand="-"/>
                <serials PGL_serial="6" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="29467" stop="29380"/>
                    <exon start="29019" stop="28902"/>
                    <exon start="28550" stop="28540"/>
                    <exon start="28292" stop="28249"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>258</number_coding_nucleotides>
                  <number_encoded_amino_acids>86</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NSSSFLILVAMDSPAANHLDIFDIYGRYCDIMSGAYATRNLVDELQKARFTREALNQLMKLVDSSLHIRNMCWRLSLKKCTSLSCG*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="+" PGL_start="34516" PGL_stop="35114"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="34516" e_stop="35114"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.970"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.970">
            <gDNA_exon_boundary e_start="34516" e_stop="35114" e_length="599"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34516" stop="35114"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E550240" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34542" stop="35095"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E389671" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAAATTATTCTCTCTCATATTTATATTTTCAAATTGTTAATTCTCTCTCCCATTTCATTTTTTTTCTCTCTTATGGTTATCTTTTCTGATTTTCCTCCAACATTCAAGTTGCAAATATTTTTTTGTCATATATTTTGGTTGTTTTTTTAATCCAAAATTGAATCAACAAGAATCCCTTTGATTAAGGTATCTCTAATCTTTATCCTATTTTCATATTTCTTTTCTAATTTTATTTTTGTTTAAATCTTAAAAAAATGTTGTTTGTATTTTTCAATTTCCGTTATGATTTAATCTCTAATGACTGAATCCAAGAGGCTTACTAGAGGTATTCATCTTAATCAACCAATTTCTGGTGATTTTTCATCCTTTAATTTATTTATTACTTAACAAATAGTGTATAATGTATGATCCGCTGCTAAAATGAGGGAAGAAAGAGGGTAAGAACATTTACAAGACTCATTGGTGTGCAAAATCTTCCTCAAATTCAGAACGCAAATGTAAAATCTTTGTCTGCTCGTGAGGATCTTGAAAAAGACGACGAAGATCGCGAACAATTTTCTATTAGTTTGTTTTGTATTTATAGTTCTTTTTTAGAATTT</gDNA_template>
            <first_frame> K  I  I  L  S  H  I  Y  I  F  K  L  L  I  L  S  P  I  S  F  F  F  S  L  M  V  I  F  S  D  F  P  P  T  F  K  L  Q  I  F  F  C  H  I  F  W  L  F  F  *  S  K  I  E  S  T  R  I  P  L  I  K  V  S  L  I  F  I  L  F  S  Y  F  F  S  N  F  I  F  V  *  I  L  K  K  C  C  L  Y  F  S  I  S  V  M  I  *  S  L  M  T  E  S  K  R  L  T  R  G  I  H  L  N  Q  P  I  S  G  D  F  S  S  F  N  L  F  I  T  *  Q  I  V  Y  N  V  *  S  A  A  K  M  R  E  E  R  G  *  E  H  L  Q  D  S  L  V  C  K  I  F  L  K  F  R  T  Q  M  *  N  L  C  L  L  V  R  I  L  K  K  T  T  K  I  A  N  N  F  L  L  V  C  F  V  F  I  V  L  F  *  N   </first_frame>
            <second_frame>  K  L  F  S  L  I  F  I  F  S  N  C  *  F  S  L  P  F  H  F  F  S  L  L  W  L  S  F  L  I  F  L  Q  H  S  S  C  K  Y  F  F  V  I  Y  F  G  C  F  F  N  P  K  L  N  Q  Q  E  S  L  *  L  R  Y  L  *  S  L  S  Y  F  H  I  S  F  L  I  L  F  L  F  K  S  *  K  N  V  V  C  I  F  Q  F  P  L  *  F  N  L  *  *  L  N  P  R  G  L  L  E  V  F  I  L  I  N  Q  F  L  V  I  F  H  P  L  I  Y  L  L  L  N  K  *  C  I  M  Y  D  P  L  L  K  *  G  K  K  E  G  K  N  I  Y  K  T  H  W  C  A  K  S  S  S  N  S  E  R  K  C  K  I  F  V  C  S  *  G  S  *  K  R  R  R  R  S  R  T  I  F  Y  *  F  V  L  Y  L  *  F  F  F  R  I  </second_frame>
            <third_frame>   N  Y  S  L  S  Y  L  Y  F  Q  I  V  N  S  L  S  H  F  I  F  F  L  S  Y  G  Y  L  F  *  F  S  S  N  I  Q  V  A  N  I  F  L  S  Y  I  L  V  V  F  L  I  Q  N  *  I  N  K  N  P  F  D  *  G  I  S  N  L  Y  P  I  F  I  F  L  F  *  F  Y  F  C  L  N  L  K  K  M  L  F  V  F  F  N  F  R  Y  D  L  I  S  N  D  *  I  Q  E  A  Y  *  R  Y  S  S  *  S  T  N  F  W  *  F  F  I  L  *  F  I  Y  Y  L  T  N  S  V  *  C  M  I  R  C  *  N  E  G  R  K  R  V  R  T  F  T  R  L  I  G  V  Q  N  L  P  Q  I  Q  N  A  N  V  K  S  L  S  A  R  E  D  L  E  K  D  D  E  D  R  E  Q  F  S  I  S  L  F  C  I  Y  S  S  F  L  E  F </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0054K23.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="+" PGL_start="43725" PGL_stop="44577"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="43725" e_stop="43975"/>
            <exon e_start="44554" e_stop="44577"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.869" e_score="0.976"/>
          <exon-only e_score="0.708"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.976">
            <gDNA_exon_boundary e_start="43725" e_stop="43975" e_length="251"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.869">
            <gDNA_intron_boundary i_start="43976" i_stop="44553" i_length="578"/>
          </intron>
          <exon e_serial="2" e_score="0.708">
            <gDNA_exon_boundary e_start="44554" e_stop="44577" e_length="24"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43725" stop="43975"/>
              <exon start="44554" stop="44577"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E223449" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTGCAGGCACAGGTGGACGCTAGAGCTACAGGTTCGTTGTTGCAGCTATCCGGACATCAGTATTCATCCGGAGTTTGGTAGGTCCTCATGCTTTCGAGGATGCTACTGTTTTACATTCTAGCGTAGTTTTAGAGTTGAGCTAGCGGAACATGTTCCACTAGCGTTTCTTTCCTGTTTTGGTTCAAACTTTGTATTGGTGCTATTTTGGCCGATATACAATTAATACTTAATGAATTATTTCTTTCAGTTGC : TCATAAAACTAAAGAAAATAACAA</gDNA_template>
            <first_frame> V  Q  A  Q  V  D  A  R  A  T  G  S  L  L  Q  L  S  G  H  Q  Y  S  S  G  V  W  *  V  L  M  L  S  R  M  L  L  F  Y  I  L  A  *  F  *  S  *  A  S  G  T  C  S  T  S  V  S  F  L  F  W  F  K  L  C  I  G  A  I  L  A  D  I  Q  L  I  L  N  E  L  F  L  S  V  A :   H  K  T  K  E  N  N   </first_frame>
            <second_frame>  C  R  H  R  W  T  L  E  L  Q  V  R  C  C  S  Y  P  D  I  S  I  H  P  E  F  G  R  S  S  C  F  R  G  C  Y  C  F  T  F  *  R  S  F  R  V  E  L  A  E  H  V  P  L  A  F  L  S  C  F  G  S  N  F  V  L  V  L  F  W  P  I  Y  N  *  Y  L  M  N  Y  F  F  Q  L   : L  I  K  L  K  K  I  T  </second_frame>
            <third_frame>   A  G  T  G  G  R  *  S  Y  R  F  V  V  A  A  I  R  T  S  V  F  I  R  S  L  V  G  P  H  A  F  E  D  A  T  V  L  H  S  S  V  V  L  E  L  S  *  R  N  M  F  H  *  R  F  F  P  V  L  V  Q  T  L  Y  W  C  Y  F  G  R  Y  T  I  N  T  *  *  I  I  S  F  S  C  :  S  *  N  *  R  K  *  Q </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0054K23.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="-" PGL_start="45492" PGL_stop="44785"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="45492" e_stop="44785"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.941"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.941">
            <gDNA_exon_boundary e_start="45492" e_stop="44785" e_length="708"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="45492" stop="44785"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E614356" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CATTGATGTAGTGATTTTCATTGCCGTGGTTGGTGCTTCTGGGGTTTTGTTGTATCCTTACATAAATCTTGTGGTGCATATACTGATTGAATTTTTCGAAGAAGTTTCTGATGTGGTGAAAGAGGAATTTTTGCGCGCTCCGATGGTGTTTATCTGTCTAGGGCTTAGCATTTTTTTTGCTGTGATTGCTCTTTTGGCAGTGACTATTTGTACAACAGGGAGAGGATGTGGGAGACCAGGTTGTCGTCGGCTTAAGAAAGCTGCTGAATTTGATATACAGCTAGAGACAGAAGACAGTCTTAAGAAGTCAAATTTGACTCCTCCTAAAATTGGAGGAGTTAAAAAGGGGATATTCAAGTTACCTAGAGATTACCATCAAGAATTGGAAGGTGAGCTTAAGAGAATGGCTCCGCCTAATGGTAGAGCCATTCTTGTGTATCGAGGCAGATGTGGTTGCTCTATAGGTACAATGGAAATTCCTGGACCAAGGAAGACTGGAAAGTTTAAGAAATAATTATAGGAAGCATATTTTGGATGCTGTAATAATCAGATGATGCCTTTGGCTGGTAATCTTCTCTGAAAAGTACTAGACCCTTTTATAAGCTTTTATATATATATATATATATATATATATATATATATATTACAAAGAACAGGAACCCTTATTATAATGTAGCAGGGGAATCTGCCATTTTGGCTACCATAATA</gDNA_template>
            <first_frame> H  *  C  S  D  F  H  C  R  G  W  C  F  W  G  F  V  V  S  L  H  K  S  C  G  A  Y  T  D  *  I  F  R  R  S  F  *  C  G  E  R  G  I  F  A  R  S  D  G  V  Y  L  S  R  A  *  H  F  F  C  C  D  C  S  F  G  S  D  Y  L  Y  N  R  E  R  M  W  E  T  R  L  S  S  A  *  E  S  C  *  I  *  Y  T  A  R  D  R  R  Q  S  *  E  V  K  F  D  S  S  *  N  W  R  S  *  K  G  D  I  Q  V  T  *  R  L  P  S  R  I  G  R  *  A  *  E  N  G  S  A  *  W  *  S  H  S  C  V  S  R  Q  M  W  L  L  Y  R  Y  N  G  N  S  W  T  K  E  D  W  K  V  *  E  I  I  I  G  S  I  F  W  M  L  *  *  S  D  D  A  F  G  W  *  S  S  L  K  S  T  R  P  F  Y  K  L  L  Y  I  Y  I  Y  I  Y  I  Y  I  Y  I  T  K  N  R  N  P  Y  Y  N  V  A  G  E  S  A  I  L  A  T  I  I </first_frame>
            <second_frame>  I  D  V  V  I  F  I  A  V  V  G  A  S  G  V  L  L  Y  P  Y  I  N  L  V  V  H  I  L  I  E  F  F  E  E  V  S  D  V  V  K  E  E  F  L  R  A  P  M  V  F  I  C  L  G  L  S  I  F  F  A  V  I  A  L  L  A  V  T  I  C  T  T  G  R  G  C  G  R  P  G  C  R  R  L  K  K  A  A  E  F  D  I  Q  L  E  T  E  D  S  L  K  K  S  N  L  T  P  P  K  I  G  G  V  K  K  G  I  F  K  L  P  R  D  Y  H  Q  E  L  E  G  E  L  K  R  M  A  P  P  N  G  R  A  I  L  V  Y  R  G  R  C  G  C  S  I  G  T  M  E  I  P  G  P  R  K  T  G  K  F  K  K  *  L  *  E  A  Y  F  G  C  C  N  N  Q  M  M  P  L  A  G  N  L  L  *  K  V  L  D  P  F  I  S  F  Y  I  Y  I  Y  I  Y  I  Y  I  Y  I  L  Q  R  T  G  T  L  I  I  M  *  Q  G  N  L  P  F  W  L  P  *   </second_frame>
            <third_frame>   L  M  *  *  F  S  L  P  W  L  V  L  L  G  F  C  C  I  L  T  *  I  L  W  C  I  Y  *  L  N  F  S  K  K  F  L  M  W  *  K  R  N  F  C  A  L  R  W  C  L  S  V  *  G  L  A  F  F  L  L  *  L  L  F  W  Q  *  L  F  V  Q  Q  G  E  D  V  G  D  Q  V  V  V  G  L  R  K  L  L  N  L  I  Y  S  *  R  Q  K  T  V  L  R  S  Q  I  *  L  L  L  K  L  E  E  L  K  R  G  Y  S  S  Y  L  E  I  T  I  K  N  W  K  V  S  L  R  E  W  L  R  L  M  V  E  P  F  L  C  I  E  A  D  V  V  A  L  *  V  Q  W  K  F  L  D  Q  G  R  L  E  S  L  R  N  N  Y  R  K  H  I  L  D  A  V  I  I  R  *  C  L  W  L  V  I  F  S  E  K  Y  *  T  L  L  *  A  F  I  Y  I  Y  I  Y  I  Y  I  Y  I  Y  Y  K  E  Q  E  P  L  L  *  C  S  R  G  I  C  H  F  G  Y  H  N  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0054K23.1" strand="-"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="45491" stop="44979"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>510</number_coding_nucleotides>
                  <number_encoded_amino_acids>170</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IDVVIFIAVVGASGVLLYPYINLVVHILIEFFEEVSDVVKEEFLRAPMVFICLGLSIFFAVIALLAVTICTTGRGCGRPGCRRLKKAAEFDIQLETEDSLKKSNLTPPKIGGVKKGIFKLPRDYHQELEGELKRMAPPNGRAILVYRGRCGCSIGTMEIPGPRKTGKFKK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="+" PGL_start="54490" PGL_stop="55078"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="54490" e_stop="55078"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.929"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.929">
            <gDNA_exon_boundary e_start="54490" e_stop="55078" e_length="589"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54490" stop="55078"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E407615" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54490" stop="55015"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E405666" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54490" stop="54981"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E405665" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTGGGACTATGAGGAATGTGCCTGTAGGTGCTGGTCGTCGGAAACACAAGAACTCGGTTTTGCATTATAGTCACGTATCCGTCTCTGAAGCACTATCAAATGTAAGAACAAATTTTCCTACTGAAACCCAGCATCCTCCCCTCACGCTCAATGGAACAATTCTGTCATTTGATACTGACAAACCCGTATCTGAGTCGATGGTTTCAGTTTTGAACGTTGCTGATAAAGGTATGCAAAATTGTTCTGGGAATGGGTTTCAAAAATATAAAGAGCTTCGAATTCAAGCTGGAGATAATGGAGATGATCATTCCGATGGATCTTCGGTTACTGCTATAAGTTCAAAGGATAGTGATAATGGATTACCTAACACTCCAAGGAAGAACTACAACAGCTTTCCAACTCATTTACCTTGCTTTACTGGAGCTCCTTGGCCATACATATGGAGTTCTGTGCACTGTAGAAATGCAGTACCTCCACCTGGTTACTCCCTTCCCGGCATTCCTATGTCTTTCATCCCTGCAACCACTTATTGGGGTTGTACAATACCAGGCTCTTGGAATGTCCCTTGGATGTCCCCACCCACTGCTTC</gDNA_template>
            <first_frame> V  G  L  *  G  M  C  L  *  V  L  V  V  G  N  T  R  T  R  F  C  I  I  V  T  Y  P  S  L  K  H  Y  Q  M  *  E  Q  I  F  L  L  K  P  S  I  L  P  S  R  S  M  E  Q  F  C  H  L  I  L  T  N  P  Y  L  S  R  W  F  Q  F  *  T  L  L  I  K  V  C  K  I  V  L  G  M  G  F  K  N  I  K  S  F  E  F  K  L  E  I  M  E  M  I  I  P  M  D  L  R  L  L  L  *  V  Q  R  I  V  I  M  D  Y  L  T  L  Q  G  R  T  T  T  A  F  Q  L  I  Y  L  A  L  L  E  L  L  G  H  T  Y  G  V  L  C  T  V  E  M  Q  Y  L  H  L  V  T  P  F  P  A  F  L  C  L  S  S  L  Q  P  L  I  G  V  V  Q  Y  Q  A  L  G  M  S  L  G  C  P  H  P  L  L  </first_frame>
            <second_frame>  W  D  Y  E  E  C  A  C  R  C  W  S  S  E  T  Q  E  L  G  F  A  L  *  S  R  I  R  L  *  S  T  I  K  C  K  N  K  F  S  Y  *  N  P  A  S  S  P  H  A  Q  W  N  N  S  V  I  *  Y  *  Q  T  R  I  *  V  D  G  F  S  F  E  R  C  *  *  R  Y  A  K  L  F  W  E  W  V  S  K  I  *  R  A  S  N  S  S  W  R  *  W  R  *  S  F  R  W  I  F  G  Y  C  Y  K  F  K  G  *  *  *  W  I  T  *  H  S  K  E  E  L  Q  Q  L  S  N  S  F  T  L  L  Y  W  S  S  L  A  I  H  M  E  F  C  A  L  *  K  C  S  T  S  T  W  L  L  P  S  R  H  S  Y  V  F  H  P  C  N  H  L  L  G  L  Y  N  T  R  L  L  E  C  P  L  D  V  P  T  H  C  F </second_frame>
            <third_frame>   G  T  M  R  N  V  P  V  G  A  G  R  R  K  H  K  N  S  V  L  H  Y  S  H  V  S  V  S  E  A  L  S  N  V  R  T  N  F  P  T  E  T  Q  H  P  P  L  T  L  N  G  T  I  L  S  F  D  T  D  K  P  V  S  E  S  M  V  S  V  L  N  V  A  D  K  G  M  Q  N  C  S  G  N  G  F  Q  K  Y  K  E  L  R  I  Q  A  G  D  N  G  D  D  H  S  D  G  S  S  V  T  A  I  S  S  K  D  S  D  N  G  L  P  N  T  P  R  K  N  Y  N  S  F  P  T  H  L  P  C  F  T  G  A  P  W  P  Y  I  W  S  S  V  H  C  R  N  A  V  P  P  P  G  Y  S  L  P  G  I  P  M  S  F  I  P  A  T  T  Y  W  G  C  T  I  P  G  S  W  N  V  P  W  M  S  P  P  T  A   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0054K23.1" strand="+"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="54492" stop="55076"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>585</number_coding_nucleotides>
                  <number_encoded_amino_acids>195</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GTMRNVPVGAGRRKHKNSVLHYSHVSVSEALSNVRTNFPTETQHPPLTLNGTILSFDTDKPVSESMVSVLNVADKGMQNCSGNGFQKYKELRIQAGDNGDDHSDGSSVTAISSKDSDNGLPNTPRKNYNSFPTHLPCFTGAPWPYIWSSVHCRNAVPPPGYSLPGIPMSFIPATTYWGCTIPGSWNVPWMSPPTA</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="+" PGL_start="64417" PGL_stop="65325"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="64417" e_stop="65325"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.988"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.988">
            <gDNA_exon_boundary e_start="64417" e_stop="65325" e_length="909"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64417" stop="64796"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E243435" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64423" stop="65025"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E212562" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64498" stop="65229"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E368408" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64524" stop="64969"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E288821" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64698" stop="65227"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E205510" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64818" stop="65325"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E356757" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64818" stop="65324"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E350558" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAATACTTTAACTCTGTTTTTTTCTGCATGCAACAGTATCACCCGCCTTTTACAACAACAAAGAGATATTTCTCTTCTTCTCCATCTCAATCAAGAACTTTAATTTTAATATGGCAGCTTCTAATTATTTGAATCGATTTCCATTCAAGAAATTCCCTGTAACTACTATTCCAGTTCCCTTGCTAATTCATGGGGCGGTGGGATTCTTCTTTCTGTATATAATCTTTGATTGTGCACGAAGACTTTTTACCTTTTTGTCCTTTGCTGAAACCCAAGTGTGTGAAAAACACGACACTCCCAAAAAACTGAGCGAGAAATTAGTTGATGGAAGCTTAAACAGGGAAGAGGTGGAAATGGTTATGGCTAATTTAGGTATTTTTGCCAATCCTGAAGGTGTGAAGATTCAGGAGAGGTTGGACATTTTTGAACTTTTCGGAGAGGAATTAGAAGCTAAAGAGCAAGAAGTAAGAGAAGCTTTTGATGTGTTTGACGAGAACAAAGATGGATTTATTGATGAAAGGGATTTGCAGAGAGTTCTGTGTGCTCTGGGATTAAAGGGTGTTGCAGAATTGGATAATTGCAAGAAGATGATCATGGCCTTTGATGAAAATGGAGATGGAAGAATCGATTTCCAGGAATTTGTCAAAATGTTGTAACAACAATCAACACAAACATTTTGTAACATTCTTTAATTTGTTCCATTTACTCTAATTTTTAAATATCTTTTATACTTATTTATAATTTTTATCTTTTAATATAATTATTTCATGTTTGAAAATTAGAATTCTTATGATCTAATAAAATTATAGTCTACAAATGTTGATGCAAAAGGAATATCAATTCAACAATAATATCGAACATTTGTTTTTTAGTTTTATGTTGATTTATACAATTAAAATACATGATCTA</gDNA_template>
            <first_frame> K  Y  F  N  S  V  F  F  C  M  Q  Q  Y  H  P  P  F  T  T  T  K  R  Y  F  S  S  S  P  S  Q  S  R  T  L  I  L  I  W  Q  L  L  I  I  *  I  D  F  H  S  R  N  S  L  *  L  L  F  Q  F  P  C  *  F  M  G  R  W  D  S  S  F  C  I  *  S  L  I  V  H  E  D  F  L  P  F  C  P  L  L  K  P  K  C  V  K  N  T  T  L  P  K  N  *  A  R  N  *  L  M  E  A  *  T  G  K  R  W  K  W  L  W  L  I  *  V  F  L  P  I  L  K  V  *  R  F  R  R  G  W  T  F  L  N  F  S  E  R  N  *  K  L  K  S  K  K  *  E  K  L  L  M  C  L  T  R  T  K  M  D  L  L  M  K  G  I  C  R  E  F  C  V  L  W  D  *  R  V  L  Q  N  W  I  I  A  R  R  *  S  W  P  L  M  K  M  E  M  E  E  S  I  S  R  N  L  S  K  C  C  N  N  N  Q  H  K  H  F  V  T  F  F  N  L  F  H  L  L  *  F  L  N  I  F  Y  T  Y  L  *  F  L  S  F  N  I  I  I  S  C  L  K  I  R  I  L  M  I  *  *  N  Y  S  L  Q  M  L  M  Q  K  E  Y  Q  F  N  N  N  I  E  H  L  F  F  S  F  M  L  I  Y  T  I  K  I  H  D  L </first_frame>
            <second_frame>  N  T  L  T  L  F  F  S  A  C  N  S  I  T  R  L  L  Q  Q  Q  R  D  I  S  L  L  L  H  L  N  Q  E  L  *  F  *  Y  G  S  F  *  L  F  E  S  I  S  I  Q  E  I  P  C  N  Y  Y  S  S  S  L  A  N  S  W  G  G  G  I  L  L  S  V  Y  N  L  *  L  C  T  K  T  F  Y  L  F  V  L  C  *  N  P  S  V  *  K  T  R  H  S  Q  K  T  E  R  E  I  S  *  W  K  L  K  Q  G  R  G  G  N  G  Y  G  *  F  R  Y  F  C  Q  S  *  R  C  E  D  S  G  E  V  G  H  F  *  T  F  R  R  G  I  R  S  *  R  A  R  S  K  R  S  F  *  C  V  *  R  E  Q  R  W  I  Y  *  *  K  G  F  A  E  S  S  V  C  S  G  I  K  G  C  C  R  I  G  *  L  Q  E  D  D  H  G  L  *  *  K  W  R  W  K  N  R  F  P  G  I  C  Q  N  V  V  T  T  I  N  T  N  I  L  *  H  S  L  I  C  S  I  Y  S  N  F  *  I  S  F  I  L  I  Y  N  F  Y  L  L  I  *  L  F  H  V  *  K  L  E  F  L  *  S  N  K  I  I  V  Y  K  C  *  C  K  R  N  I  N  S  T  I  I  S  N  I  C  F  L  V  L  C  *  F  I  Q  L  K  Y  M  I   </second_frame>
            <third_frame>   I  L  *  L  C  F  F  L  H  A  T  V  S  P  A  F  Y  N  N  K  E  I  F  L  F  F  S  I  S  I  K  N  F  N  F  N  M  A  A  S  N  Y  L  N  R  F  P  F  K  K  F  P  V  T  T  I  P  V  P  L  L  I  H  G  A  V  G  F  F  F  L  Y  I  I  F  D  C  A  R  R  L  F  T  F  L  S  F  A  E  T  Q  V  C  E  K  H  D  T  P  K  K  L  S  E  K  L  V  D  G  S  L  N  R  E  E  V  E  M  V  M  A  N  L  G  I  F  A  N  P  E  G  V  K  I  Q  E  R  L  D  I  F  E  L  F  G  E  E  L  E  A  K  E  Q  E  V  R  E  A  F  D  V  F  D  E  N  K  D  G  F  I  D  E  R  D  L  Q  R  V  L  C  A  L  G  L  K  G  V  A  E  L  D  N  C  K  K  M  I  M  A  F  D  E  N  G  D  G  R  I  D  F  Q  E  F  V  K  M  L  *  Q  Q  S  T  Q  T  F  C  N  I  L  *  F  V  P  F  T  L  I  F  K  Y  L  L  Y  L  F  I  I  F  I  F  *  Y  N  Y  F  M  F  E  N  *  N  S  Y  D  L  I  K  L  *  S  T  N  V  D  A  K  G  I  S  I  Q  Q  *  Y  R  T  F  V  F  *  F  Y  V  D  L  Y  N  *  N  T  *  S  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0054K23.1" strand="+"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="64428" stop="65072"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>642</number_coding_nucleotides>
                  <number_encoded_amino_acids>214</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LCFFLHATVSPAFYNNKEIFLFFSISIKNFNFNMAASNYLNRFPFKKFPVTTIPVPLLIHGAVGFFFLYIIFDCARRLFTFLSFAETQVCEKHDTPKKLSEKLVDGSLNREEVEMVMANLGIFANPEGVKIQERLDIFELFGEELEAKEQEVREAFDVFDENKDGFIDERDLQRVLCALGLKGVAELDNCKKMIMAFDENGDGRIDFQEFVKML*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="+" PGL_start="66495" PGL_stop="67257"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="66495" e_stop="67257"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.970"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.970">
            <gDNA_exon_boundary e_start="66495" e_stop="67257" e_length="763"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="66495" stop="67257"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E689229" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AACACGTTATCAGCACGAAGTTGCTACTTGCAAAGGTATTATATAAATATTTTTATTTGATTCACATATTCTTTCATAATTTCATTATGTCGAATTTATCCAAACTTGAGTTTGTGGCATTAGATATTTCTGGAAAGAATTATCTTTCATGGGTACTCGATGCTGAGATTCACTTGGCTGCTAAAGGTCTTGATGCCGCTATTACTCAGGGAAATGAAGCATCGAGTCAAGATAAGGCAAAAACTATGATTTTCCTTCGTCATCATCTTGATGAGGGCCTGAAGATTGAATATCTGACGGTGAAAGATCCACTTGAATTGTGGACTGACTTAAAGGGGAGATATGACCACCTAAAGGCAACAGTGTTGCCAAGAGCCCGTTATGAGTGGATGCATTTACGGTTTCAAGATTTTAAGACCGTAATTGAATACAACTCTGCTGTATTCAGGATAACCTCCCAGTTAAAATTATGTGGGGAGACTATAAAAGATGAGGACATGTTGGAAAAGACACTTACTACTTTCCATGCCTCAAATATGATATTGCAGCAACAATATCGTGAAAAGGGTTTTCAGAAATATTCTGAACTAATTTCATGTCTTTTGGTGGTTGAGCAACATAATGCTCTTTTAATGAAAAATCATGAAGCTCGTCCCACTGGAGCTGCTCCATTACCGGAGGCAAATGTGGTGGAAGCACGTGATCAATCTGAAGTAAAAAGAGATGATCATCGGGGCTATAATAATGCACGGGGACGTGGCAA</gDNA_template>
            <first_frame> N  T  L  S  A  R  S  C  Y  L  Q  R  Y  Y  I  N  I  F  I  *  F  T  Y  S  F  I  I  S  L  C  R  I  Y  P  N  L  S  L  W  H  *  I  F  L  E  R  I  I  F  H  G  Y  S  M  L  R  F  T  W  L  L  K  V  L  M  P  L  L  L  R  E  M  K  H  R  V  K  I  R  Q  K  L  *  F  S  F  V  I  I  L  M  R  A  *  R  L  N  I  *  R  *  K  I  H  L  N  C  G  L  T  *  R  G  D  M  T  T  *  R  Q  Q  C  C  Q  E  P  V  M  S  G  C  I  Y  G  F  K  I  L  R  P  *  L  N  T  T  L  L  Y  S  G  *  P  P  S  *  N  Y  V  G  R  L  *  K  M  R  T  C  W  K  R  H  L  L  L  S  M  P  Q  I  *  Y  C  S  N  N  I  V  K  R  V  F  R  N  I  L  N  *  F  H  V  F  W  W  L  S  N  I  M  L  F  *  *  K  I  M  K  L  V  P  L  E  L  L  H  Y  R  R  Q  M  W  W  K  H  V  I  N  L  K  *  K  E  M  I  I  G  A  I  I  M  H  G  D  V  A  </first_frame>
            <second_frame>  T  R  Y  Q  H  E  V  A  T  C  K  G  I  I  *  I  F  L  F  D  S  H  I  L  S  *  F  H  Y  V  E  F  I  Q  T  *  V  C  G  I  R  Y  F  W  K  E  L  S  F  M  G  T  R  C  *  D  S  L  G  C  *  R  S  *  C  R  Y  Y  S  G  K  *  S  I  E  S  R  *  G  K  N  Y  D  F  P  S  S  S  S  *  *  G  P  E  D  *  I  S  D  G  E  R  S  T  *  I  V  D  *  L  K  G  E  I  *  P  P  K  G  N  S  V  A  K  S  P  L  *  V  D  A  F  T  V  S  R  F  *  D  R  N  *  I  Q  L  C  C  I  Q  D  N  L  P  V  K  I  M  W  G  D  Y  K  R  *  G  H  V  G  K  D  T  Y  Y  F  P  C  L  K  Y  D  I  A  A  T  I  S  *  K  G  F  S  E  I  F  *  T  N  F  M  S  F  G  G  *  A  T  *  C  S  F  N  E  K  S  *  S  S  S  H  W  S  C  S  I  T  G  G  K  C  G  G  S  T  *  S  I  *  S  K  K  R  *  S  S  G  L  *  *  C  T  G  T  W  Q </second_frame>
            <third_frame>   H  V  I  S  T  K  L  L  L  A  K  V  L  Y  K  Y  F  Y  L  I  H  I  F  F  H  N  F  I  M  S  N  L  S  K  L  E  F  V  A  L  D  I  S  G  K  N  Y  L  S  W  V  L  D  A  E  I  H  L  A  A  K  G  L  D  A  A  I  T  Q  G  N  E  A  S  S  Q  D  K  A  K  T  M  I  F  L  R  H  H  L  D  E  G  L  K  I  E  Y  L  T  V  K  D  P  L  E  L  W  T  D  L  K  G  R  Y  D  H  L  K  A  T  V  L  P  R  A  R  Y  E  W  M  H  L  R  F  Q  D  F  K  T  V  I  E  Y  N  S  A  V  F  R  I  T  S  Q  L  K  L  C  G  E  T  I  K  D  E  D  M  L  E  K  T  L  T  T  F  H  A  S  N  M  I  L  Q  Q  Q  Y  R  E  K  G  F  Q  K  Y  S  E  L  I  S  C  L  L  V  V  E  Q  H  N  A  L  L  M  K  N  H  E  A  R  P  T  G  A  A  P  L  P  E  A  N  V  V  E  A  R  D  Q  S  E  V  K  R  D  D  H  R  G  Y  N  N  A  R  G  R  G   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0054K23.1" strand="+"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="66497" stop="67255"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>759</number_coding_nucleotides>
                  <number_encoded_amino_acids>253</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>HVISTKLLLAKVLYKYFYLIHIFFHNFIMSNLSKLEFVALDISGKNYLSWVLDAEIHLAAKGLDAAITQGNEASSQDKAKTMIFLRHHLDEGLKIEYLTVKDPLELWTDLKGRYDHLKATVLPRARYEWMHLRFQDFKTVIEYNSAVFRITSQLKLCGETIKDEDMLEKTLTTFHASNMILQQQYREKGFQKYSELISCLLVVEQHNALLMKNHEARPTGAAPLPEANVVEARDQSEVKRDDHRGYNNARGRG</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="+" PGL_start="67792" PGL_stop="68337"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="67792" e_stop="68337"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.903"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.903">
            <gDNA_exon_boundary e_start="67792" e_stop="68337" e_length="546"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="67792" stop="68337"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E206250" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="67902" stop="68270"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E332350" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAATCCCCAGTTGACAGTTGGATTCAAGATGAGTAATGGAAATGTATGTCTTCTTGATAGTGCTACAACACATACAATATTAAAAGAAAAGAAATGCTTTTCTAATTTGGTTATGAAAATGACATATGTCAACACAATATCAGGTAGTACAAAATTAATTGAGGGCTCTGGAAGAGCGACCTTATTACTACCTGGAGGGACAATATTAAGCATTGATAATGCATTATATTGTAGTAAGTCTCAAAGAAACTTATTAAGTTTCAAAGTTATTCGCCAAAATGGCTATCATGTTGAGACGGCTAATGAAGGAAAGGTTGAATACCTTTACATTACTACAATTAATGTTGAGAAGAAAATTGTGCATGAAAAATTACCTGCATTTTCTTCTGGGTTGTACTATACAAGTATAAGTACAGTTGAATCACATGCCGTAATAAACAAAAGGTTTACTAATTTTAATGATTTTATCATTTGGCATGACCGGTTGGGCCATCCTGGATTTAATATGATGCGCAAAATCATTGAGAATTCACATGGACACACCTT</gDNA_template>
            <first_frame> K  S  P  V  D  S  W  I  Q  D  E  *  W  K  C  M  S  S  *  *  C  Y  N  T  Y  N  I  K  R  K  E  M  L  F  *  F  G  Y  E  N  D  I  C  Q  H  N  I  R  *  Y  K  I  N  *  G  L  W  K  S  D  L  I  T  T  W  R  D  N  I  K  H  *  *  C  I  I  L  *  *  V  S  K  K  L  I  K  F  Q  S  Y  S  P  K  W  L  S  C  *  D  G  *  *  R  K  G  *  I  P  L  H  Y  Y  N  *  C  *  E  E  N  C  A  *  K  I  T  C  I  F  F  W  V  V  L  Y  K  Y  K  Y  S  *  I  T  C  R  N  K  Q  K  V  Y  *  F  *  *  F  Y  H  L  A  *  P  V  G  P  S  W  I  *  Y  D  A  Q  N  H  *  E  F  T  W  T  H  L </first_frame>
            <second_frame>  N  P  Q  L  T  V  G  F  K  M  S  N  G  N  V  C  L  L  D  S  A  T  T  H  T  I  L  K  E  K  K  C  F  S  N  L  V  M  K  M  T  Y  V  N  T  I  S  G  S  T  K  L  I  E  G  S  G  R  A  T  L  L  L  P  G  G  T  I  L  S  I  D  N  A  L  Y  C  S  K  S  Q  R  N  L  L  S  F  K  V  I  R  Q  N  G  Y  H  V  E  T  A  N  E  G  K  V  E  Y  L  Y  I  T  T  I  N  V  E  K  K  I  V  H  E  K  L  P  A  F  S  S  G  L  Y  Y  T  S  I  S  T  V  E  S  H  A  V  I  N  K  R  F  T  N  F  N  D  F  I  I  W  H  D  R  L  G  H  P  G  F  N  M  M  R  K  I  I  E  N  S  H  G  H  T   </second_frame>
            <third_frame>   I  P  S  *  Q  L  D  S  R  *  V  M  E  M  Y  V  F  L  I  V  L  Q  H  I  Q  Y  *  K  K  R  N  A  F  L  I  W  L  *  K  *  H  M  S  T  Q  Y  Q  V  V  Q  N  *  L  R  A  L  E  E  R  P  Y  Y  Y  L  E  G  Q  Y  *  A  L  I  M  H  Y  I  V  V  S  L  K  E  T  Y  *  V  S  K  L  F  A  K  M  A  I  M  L  R  R  L  M  K  E  R  L  N  T  F  T  L  L  Q  L  M  L  R  R  K  L  C  M  K  N  Y  L  H  F  L  L  G  C  T  I  Q  V  *  V  Q  L  N  H  M  P  *  *  T  K  G  L  L  I  L  M  I  L  S  F  G  M  T  G  W  A  I  L  D  L  I  *  C  A  K  S  L  R  I  H  M  D  T  P  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0054K23.1" strand="+"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="67793" stop="68335"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>543</number_coding_nucleotides>
                  <number_encoded_amino_acids>181</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NPQLTVGFKMSNGNVCLLDSATTHTILKEKKCFSNLVMKMTYVNTISGSTKLIEGSGRATLLLPGGTILSIDNALYCSKSQRNLLSFKVIRQNGYHVETANEGKVEYLYITTINVEKKIVHEKLPAFSSGLYYTSISTVESHAVINKRFTNFNDFIIWHDRLGHPGFNMMRKIIENSHGHT</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="+" PGL_start="69648" PGL_stop="71376"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="69648" e_stop="71376"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.979"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.979">
            <gDNA_exon_boundary e_start="69648" e_stop="71376" e_length="1729"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69648" stop="70358"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E331947" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70224" stop="70861"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E205887" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70264" stop="70891"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E209835" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70264" stop="70839"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E209830" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70314" stop="70866"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E299938" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70479" stop="71242"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E211563" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70506" stop="71076"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E201786" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70810" stop="71208"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E200850" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70996" stop="71376"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E351886" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAGTAATGCAACAAGATGAAGATTTTGAGCCAAAATCTGTTCGCGAATGTAAACAGAGAAATAATTGGCCAAAATGGAAGGATGCAATTCAAGCTGAATTGGCTTCACTAGAAAAACGTGAAGTTTTTGGACCAATAATCCGAACACCTGAAGGTATCAAGCCAGTGGGGTACAAATGGATTTTTGTACGAAAAAGAAATGAGAAAGGTGAAGTCATGAGATATAAGGCCCGACTCGTTGCTCAAGGTTTTTCTCAAAGACCTGGCATTGATTATATGAAGACATATTCTCCAGTGGTAGATGCAATCACCTTTAGATATCTCATAAATCTGGCAGTTCATGAAAAACTTGAAATGCGTCTAATGGACGTTGTCACGGCCTATCTATATGGCTCATTGGACCATAATATTTTCATGAAAATTCCTGAAGCATTCAAAGTGCCTGAAGCATACAAAGATTCAAGAGAAACTTGTTCAATAAAGCTTTTGAAGTCTCTGTATGGATTGAAACAATCAGGAAGGATGTGGTACAATCGTCTAAGTGAATATTTGTTAAAGAAAGGGTACAAAAATGACCCGATTTGTCCCTGTATTTTCATTAAACGGTCGGGGTCTGAATTTGTAATAATAGTTGTGTATGTTGATGATTTGAACATCATTGGCACTCGTAAAGAGCTTTTAGAAGCTGTTGAGTGTCTGCAAAAAGAATTTGAAATGAAATATCTCGGCAAGACAAAATTTTGTCTTGGTCTACAGATTGAGAATTTGTCAAATGGAATACTTGTTCATCAATCAACGTACACAGAAAAGATACTAAAGCGTTTTTACATGGATAACTCACATCCATTGAGTACTCCAATGGTGGTAAGATCGCTTGGCATCAATACAGATCCATTTCGACCTCAAGAGAATGATGAAGAGCTTCTTGGTGATGAAACTCCTTATCTTAGTGCGATCGGGGCACTAATGTACCTTGCTAACAATACTTGACCAGATATCTGTTTTGCAGTAAGTCTACTGGCAAGATTCAGTTCCTCCCCAACAAAAAGACATTGGAATGGTGTTAAACACATACTTAGATATGTTCGAGGGACCATGGACATGGGTTTATTCTATTCCAATGAATCCAAATCAGAACTGATTGGTTACGCAGATGCAGGGTATTTATCAGATCCACATAAAGCTCGATCACAAACAGGCTATTTGTTTACATGTGGAGACACGGCAATATCTTGGCGATCAATGAAGCAAACATTGGTAGCCACTTCTTCAAATCATGCAGAAATAATAGCCATCCATGAAGCAAGTCGAGAGTGTGTCTGGTTGAGATCAATGACCCATCATATTCAGAAAATGTGTGGTTTTTCTTTGAAAAAGAATATACCAACCACAATGTACGAAGATAATGCTGCATGTATAGCTCAATTGAAAGGAGGATACATCAAAGGAGACCGGACAAAGCATATCTCACCAAAGTTCTTTTTCACGCATGATCTTCAACAAAATGGTGAGATAGAAGTTCAACAAATTCGTTCAAGTGATAATCTTGCTGATTTATTCACTAAGGCATTGCCAACATCAACATTTGAGAAGTTGAGATACAAGATTGGAATGCGCCGTCTCCGAGATATCAAGTAAAGTTTTCATCAGGGGGAGCGAAATACGCGTTGTACTCTTTTCCTTAACTATGGTTTTGTCCCAAGTTGGGTTTTCCTGGTAAGGTTTTTAAT</gDNA_template>
            <first_frame> K  *  C  N  K  M  K  I  L  S  Q  N  L  F  A  N  V  N  R  E  I  I  G  Q  N  G  R  M  Q  F  K  L  N  W  L  H  *  K  N  V  K  F  L  D  Q  *  S  E  H  L  K  V  S  S  Q  W  G  T  N  G  F  L  Y  E  K  E  M  R  K  V  K  S  *  D  I  R  P  D  S  L  L  K  V  F  L  K  D  L  A  L  I  I  *  R  H  I  L  Q  W  *  M  Q  S  P  L  D  I  S  *  I  W  Q  F  M  K  N  L  K  C  V  *  W  T  L  S  R  P  I  Y  M  A  H  W  T  I  I  F  S  *  K  F  L  K  H  S  K  C  L  K  H  T  K  I  Q  E  K  L  V  Q  *  S  F  *  S  L  C  M  D  *  N  N  Q  E  G  C  G  T  I  V  *  V  N  I  C  *  R  K  G  T  K  M  T  R  F  V  P  V  F  S  L  N  G  R  G  L  N  L  *  *  *  L  C  M  L  M  I  *  T  S  L  A  L  V  K  S  F  *  K  L  L  S  V  C  K  K  N  L  K  *  N  I  S  A  R  Q  N  F  V  L  V  Y  R  L  R  I  C  Q  M  E  Y  L  F  I  N  Q  R  T  Q  K  R  Y  *  S  V  F  T  W  I  T  H  I  H  *  V  L  Q  W  W  *  D  R  L  A  S  I  Q  I  H  F  D  L  K  R  M  M  K  S  F  L  V  M  K  L  L  I  L  V  R  S  G  H  *  C  T  L  L  T  I  L  D  Q  I  S  V  L  Q  *  V  Y  W  Q  D  S  V  P  P  Q  Q  K  D  I  G  M  V  L  N  T  Y  L  D  M  F  E  G  P  W  T  W  V  Y  S  I  P  M  N  P  N  Q  N  *  L  V  T  Q  M  Q  G  I  Y  Q  I  H  I  K  L  D  H  K  Q  A  I  C  L  H  V  E  T  R  Q  Y  L  G  D  Q  *  S  K  H  W  *  P  L  L  Q  I  M  Q  K  *  *  P  S  M  K  Q  V  E  S  V  S  G  *  D  Q  *  P  I  I  F  R  K  C  V  V  F  L  *  K  R  I  Y  Q  P  Q  C  T  K  I  M  L  H  V  *  L  N  *  K  E  D  T  S  K  E  T  G  Q  S  I  S  H  Q  S  S  F  S  R  M  I  F  N  K  M  V  R  *  K  F  N  K  F  V  Q  V  I  I  L  L  I  Y  S  L  R  H  C  Q  H  Q  H  L  R  S  *  D  T  R  L  E  C  A  V  S  E  I  S  S  K  V  F  I  R  G  S  E  I  R  V  V  L  F  S  L  T  M  V  L  S  Q  V  G  F  S  W  *  G  F  *  </first_frame>
            <second_frame>  S  N  A  T  R  *  R  F  *  A  K  I  C  S  R  M  *  T  E  K  *  L  A  K  M  E  G  C  N  S  S  *  I  G  F  T  R  K  T  *  S  F  W  T  N  N  P  N  T  *  R  Y  Q  A  S  G  V  Q  M  D  F  C  T  K  K  K  *  E  R  *  S  H  E  I  *  G  P  T  R  C  S  R  F  F  S  K  T  W  H  *  L  Y  E  D  I  F  S  S  G  R  C  N  H  L  *  I  S  H  K  S  G  S  S  *  K  T  *  N  A  S  N  G  R  C  H  G  L  S  I  W  L  I  G  P  *  Y  F  H  E  N  S  *  S  I  Q  S  A  *  S  I  Q  R  F  K  R  N  L  F  N  K  A  F  E  V  S  V  W  I  E  T  I  R  K  D  V  V  Q  S  S  K  *  I  F  V  K  E  R  V  Q  K  *  P  D  L  S  L  Y  F  H  *  T  V  G  V  *  I  C  N  N  S  C  V  C  *  *  F  E  H  H  W  H  S  *  R  A  F  R  S  C  *  V  S  A  K  R  I  *  N  E  I  S  R  Q  D  K  I  L  S  W  S  T  D  *  E  F  V  K  W  N  T  C  S  S  I  N  V  H  R  K  D  T  K  A  F  L  H  G  *  L  T  S  I  E  Y  S  N  G  G  K  I  A  W  H  Q  Y  R  S  I  S  T  S  R  E  *  *  R  A  S  W  *  *  N  S  L  S  *  C  D  R  G  T  N  V  P  C  *  Q  Y  L  T  R  Y  L  F  C  S  K  S  T  G  K  I  Q  F  L  P  N  K  K  T  L  E  W  C  *  T  H  T  *  I  C  S  R  D  H  G  H  G  F  I  L  F  Q  *  I  Q  I  R  T  D  W  L  R  R  C  R  V  F  I  R  S  T  *  S  S  I  T  N  R  L  F  V  Y  M  W  R  H  G  N  I  L  A  I  N  E  A  N  I  G  S  H  F  F  K  S  C  R  N  N  S  H  P  *  S  K  S  R  V  C  L  V  E  I  N  D  P  S  Y  S  E  N  V  W  F  F  F  E  K  E  Y  T  N  H  N  V  R  R  *  C  C  M  Y  S  S  I  E  R  R  I  H  Q  R  R  P  D  K  A  Y  L  T  K  V  L  F  H  A  *  S  S  T  K  W  *  D  R  S  S  T  N  S  F  K  *  *  S  C  *  F  I  H  *  G  I  A  N  I  N  I  *  E  V  E  I  Q  D  W  N  A  P  S  P  R  Y  Q  V  K  F  S  S  G  G  A  K  Y  A  L  Y  S  F  P  *  L  W  F  C  P  K  L  G  F  P  G  K  V  F  N </second_frame>
            <third_frame>   V  M  Q  Q  D  E  D  F  E  P  K  S  V  R  E  C  K  Q  R  N  N  W  P  K  W  K  D  A  I  Q  A  E  L  A  S  L  E  K  R  E  V  F  G  P  I  I  R  T  P  E  G  I  K  P  V  G  Y  K  W  I  F  V  R  K  R  N  E  K  G  E  V  M  R  Y  K  A  R  L  V  A  Q  G  F  S  Q  R  P  G  I  D  Y  M  K  T  Y  S  P  V  V  D  A  I  T  F  R  Y  L  I  N  L  A  V  H  E  K  L  E  M  R  L  M  D  V  V  T  A  Y  L  Y  G  S  L  D  H  N  I  F  M  K  I  P  E  A  F  K  V  P  E  A  Y  K  D  S  R  E  T  C  S  I  K  L  L  K  S  L  Y  G  L  K  Q  S  G  R  M  W  Y  N  R  L  S  E  Y  L  L  K  K  G  Y  K  N  D  P  I  C  P  C  I  F  I  K  R  S  G  S  E  F  V  I  I  V  V  Y  V  D  D  L  N  I  I  G  T  R  K  E  L  L  E  A  V  E  C  L  Q  K  E  F  E  M  K  Y  L  G  K  T  K  F  C  L  G  L  Q  I  E  N  L  S  N  G  I  L  V  H  Q  S  T  Y  T  E  K  I  L  K  R  F  Y  M  D  N  S  H  P  L  S  T  P  M  V  V  R  S  L  G  I  N  T  D  P  F  R  P  Q  E  N  D  E  E  L  L  G  D  E  T  P  Y  L  S  A  I  G  A  L  M  Y  L  A  N  N  T  *  P  D  I  C  F  A  V  S  L  L  A  R  F  S  S  S  P  T  K  R  H  W  N  G  V  K  H  I  L  R  Y  V  R  G  T  M  D  M  G  L  F  Y  S  N  E  S  K  S  E  L  I  G  Y  A  D  A  G  Y  L  S  D  P  H  K  A  R  S  Q  T  G  Y  L  F  T  C  G  D  T  A  I  S  W  R  S  M  K  Q  T  L  V  A  T  S  S  N  H  A  E  I  I  A  I  H  E  A  S  R  E  C  V  W  L  R  S  M  T  H  H  I  Q  K  M  C  G  F  S  L  K  K  N  I  P  T  T  M  Y  E  D  N  A  A  C  I  A  Q  L  K  G  G  Y  I  K  G  D  R  T  K  H  I  S  P  K  F  F  F  T  H  D  L  Q  Q  N  G  E  I  E  V  Q  Q  I  R  S  S  D  N  L  A  D  L  F  T  K  A  L  P  T  S  T  F  E  K  L  R  Y  K  I  G  M  R  R  L  R  D  I  K  *  S  F  H  Q  G  E  R  N  T  R  C  T  L  F  L  N  Y  G  F  V  P  S  W  V  F  L  V  R  F  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0054K23.1" strand="+"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="69650" stop="70636"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>984</number_coding_nucleotides>
                  <number_encoded_amino_acids>328</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VMQQDEDFEPKSVRECKQRNNWPKWKDAIQAELASLEKREVFGPIIRTPEGIKPVGYKWIFVRKRNEKGEVMRYKARLVAQGFSQRPGIDYMKTYSPVVDAITFRYLINLAVHEKLEMRLMDVVTAYLYGSLDHNIFMKIPEAFKVPEAYKDSRETCSIKLLKSLYGLKQSGRMWYNRLSEYLLKKGYKNDPICPCIFIKRSGSEFVIIVVYVDDLNIIGTRKELLEAVECLQKEFEMKYLGKTKFCLGLQIENLSNGILVHQSTYTEKILKRFYMDNSHPLSTPMVVRSLGINTDPFRPQENDEELLGDETPYLSAIGALMYLANNT*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0054K23.1" strand="+"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="70637" stop="71284"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>645</number_coding_nucleotides>
                  <number_encoded_amino_acids>215</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PDICFAVSLLARFSSSPTKRHWNGVKHILRYVRGTMDMGLFYSNESKSELIGYADAGYLSDPHKARSQTGYLFTCGDTAISWRSMKQTLVATSSNHAEIIAIHEASRECVWLRSMTHHIQKMCGFSLKKNIPTTMYEDNAACIAQLKGGYIKGDRTKHISPKFFFTHDLQQNGEIEVQQIRSSDNLADLFTKALPTSTFEKLRYKIGMRRLRDIK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="15" PGL_strand="-" PGL_start="76255" PGL_stop="73660"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="76255" e_stop="76160"/>
            <exon e_start="76071" e_stop="75940"/>
            <exon e_start="75862" e_stop="75574"/>
            <exon e_start="75455" e_stop="74625"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.404" acc_prob="0.916" e_score="0.979"/>
          <exon-intron don_prob="0.993" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.979">
            <gDNA_exon_boundary e_start="76255" e_stop="76160" e_length="96"/>
          </exon>
          <intron i_serial="1" don_prob="0.404" acc_prob="0.916">
            <gDNA_intron_boundary i_start="76159" i_stop="76072" i_length="88"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="76071" e_stop="75940" e_length="132"/>
          </exon>
          <intron i_serial="2" don_prob="0.993" acc_prob="1.000">
            <gDNA_intron_boundary i_start="75939" i_stop="75863" i_length="77"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="75862" e_stop="75574" e_length="289"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="1.000">
            <gDNA_intron_boundary i_start="75573" i_stop="75456" i_length="118"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="75455" e_stop="74625" e_length="831"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76255" stop="76160"/>
              <exon start="76071" stop="75940"/>
              <exon start="75862" stop="75687"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E367501" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76224" stop="76160"/>
              <exon start="76071" stop="75940"/>
              <exon start="75862" stop="75574"/>
              <exon start="75455" stop="75131"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E708188" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76224" stop="76160"/>
              <exon start="76071" stop="75940"/>
              <exon start="75862" stop="75574"/>
              <exon start="75455" stop="75285"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E344318" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76223" stop="76160"/>
              <exon start="76071" stop="75940"/>
              <exon start="75862" stop="75574"/>
              <exon start="75455" stop="75027"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E708293" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76218" stop="76160"/>
              <exon start="76071" stop="75940"/>
              <exon start="75862" stop="75574"/>
              <exon start="75455" stop="74711"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E747613" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76200" stop="76160"/>
              <exon start="76071" stop="75940"/>
              <exon start="75862" stop="75574"/>
              <exon start="75455" stop="75080"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E698918" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76195" stop="76160"/>
              <exon start="76071" stop="75940"/>
              <exon start="75862" stop="75574"/>
              <exon start="75455" stop="75079"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E705776" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76191" stop="76160"/>
              <exon start="76071" stop="75940"/>
              <exon start="75862" stop="75574"/>
              <exon start="75455" stop="75297"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E393990" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76190" stop="76160"/>
              <exon start="76071" stop="75940"/>
              <exon start="75862" stop="75574"/>
              <exon start="75455" stop="75342"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E201919" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76188" stop="76160"/>
              <exon start="76071" stop="75940"/>
              <exon start="75862" stop="75574"/>
              <exon start="75455" stop="75448"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E225143" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76187" stop="76160"/>
              <exon start="76071" stop="75940"/>
              <exon start="75862" stop="75574"/>
              <exon start="75455" stop="75031"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E700772" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76187" stop="76160"/>
              <exon start="76071" stop="75940"/>
              <exon start="75862" stop="75636"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E697422" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76184" stop="76160"/>
              <exon start="76071" stop="75940"/>
              <exon start="75862" stop="75574"/>
              <exon start="75455" stop="75376"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E245993" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76184" stop="76160"/>
              <exon start="76071" stop="75940"/>
              <exon start="75862" stop="75574"/>
              <exon start="75455" stop="75434"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E225542" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76183" stop="76160"/>
              <exon start="76071" stop="75940"/>
              <exon start="75862" stop="75574"/>
              <exon start="75455" stop="75008"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E738456" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76183" stop="76160"/>
              <exon start="76071" stop="75940"/>
              <exon start="75862" stop="75574"/>
              <exon start="75455" stop="75089"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E726890" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76175" stop="76160"/>
              <exon start="76071" stop="75940"/>
              <exon start="75862" stop="75574"/>
              <exon start="75455" stop="75007"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E701084" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76175" stop="76160"/>
              <exon start="76071" stop="75940"/>
              <exon start="75862" stop="75739"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E244470" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76174" stop="76160"/>
              <exon start="76071" stop="75940"/>
              <exon start="75862" stop="75574"/>
              <exon start="75455" stop="75342"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E366452" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76059" stop="75940"/>
              <exon start="75862" stop="75574"/>
              <exon start="75455" stop="75027"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E704988" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75849" stop="75574"/>
              <exon start="75455" stop="75091"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E211454" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75808" stop="75574"/>
              <exon start="75455" stop="74945"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E731100" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75723" stop="75574"/>
              <exon start="75455" stop="75238"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E393254" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75722" stop="75574"/>
              <exon start="75455" stop="75086"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E208328" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75709" stop="75574"/>
              <exon start="75455" stop="74953"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E355097" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75709" stop="75574"/>
              <exon start="75455" stop="74954"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E354489" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75394" stop="74951"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E354889" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75382" stop="74701"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E393805" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75352" stop="74709"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E578424" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75280" stop="74815"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E244787" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75186" stop="74709"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E363859" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75129" stop="74625"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E367088" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75127" stop="74700"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E393469" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTTAGTTCCTCTATTTATTCTCCACGATTGCTGATATCTTCATTTCCTAACTATACCCTCGTTCCTCAAGCAAACACATAGAAACTTTATTTTTTT : GTTCAAAAATGGCTCTTTTAGCTATCCTTTTAATGGGAATTTCCCTCATGTTTCAATCAGCCCATGGCTATGGTGGTTGGATCAATGCACATGCCACTTTTTACGGTGGAGGAGATGCTTCTGGAACTATGG : GTGGTGCTTGTGGTTACGGAAATTTATACAGCACGGGATACGGAACGAACACTGCTGCGTTGAGTACTGCTCTGTTCAACAACGGGTTGAGCTGTGGAGCGTGTTTTCAGCTAATGTGTGTGAATGCGGGGCAGTACTGCCTGCCAGGCATAATTACGGTAACAGCCACCAATTTCTGTCCACCAGGAGGATGGTGTGATCCTCCACGCCCTCATTTTGATCTCTCTCAACCTATCTTCTTGCGCATTGCTCAATATAGAGCTGGCATAGTTCCTGTTGCCTATAGAAG : GGTACCCTGCAGAAGAAGCGGAGGAATTAGATTTACAATCAATGGCCACTCTTACTTCAACTTGGTTCTTGTAACAAATGTTGGAGGTTCAGGGGATGTACATTCAGTATACATAAAGGGTTCAAGAACTCAATGGCAACCAATGTCAAGAAATTGGGGCCAAAATTGGCAGAATAACGCTTACCTTAACGGCCAAAGCTTGTCCTTTAAGGTCACTACAGGCGATGGTCGCACTGTTGTTTCATACAATGCAGCTCCTAGTTCTTGGTCATTTGGTCAGACATTTTCTGGAGGACAATTCCGTTAAAACGCAACATATTCTTTAAGAAAAAAAAATCAGAATTTTCAAAGTATACTACTTGCTAATATATTATTCTAAGAGTTTTGCCTTAAATTTGAGGGTTTTACTCACCAAAATATTTGGGGAAAAGCGCAGTTTGGCACTTTTTGTCCATTGTAAAATTGGTCATTCAATTGTGGAAGTAAAAAGAATTGATTTGGCCTACTCTTTTTTGGGTGGTTATTAACGTTTAGGGGGCGGCAGTTGTGAGCTTTTACTGCTCAATTTAATAGTATAAATAGCATTTACGGTATTGTGTGCATAGAAGAAAAATATCTATTTTTTTTTTTTACTGCAAAAGAGCTAAGCACTAATTATGGTGAGTATGTATGTACCAATTGTCTCTAGCTATTTGTTTGTAAGAAAATGTTACTATAATAATAAAAGGAAACTCCAAGTTGTACTAGGTGCAATGTCTTATAAAGAGCATTCTCTACCTTACCATTTCTTAATGATGTCTTCTTCTAAATATGAGAGTTTTTACTATAAAA</gDNA_template>
            <first_frame> F  S  S  S  I  Y  S  P  R  L  L  I  S  S  F  P  N  Y  T  L  V  P  Q  A  N  T  *  K  L  Y  F  F  :  V  Q  K  W  L  F  *  L  S  F  *  W  E  F  P  S  C  F  N  Q  P  M  A  M  V  V  G  S  M  H  M  P  L  F  T  V  E  E  M  L  L  E  L  W  :  V  V  L  V  V  T  E  I  Y  T  A  R  D  T  E  R  T  L  L  R  *  V  L  L  C  S  T  T  G  *  A  V  E  R  V  F  S  *  C  V  *  M  R  G  S  T  A  C  Q  A  *  L  R  *  Q  P  P  I  S  V  H  Q  E  D  G  V  I  L  H  A  L  I  L  I  S  L  N  L  S  S  C  A  L  L  N  I  E  L  A  *  F  L  L  P  I  E   : G  Y  P  A  E  E  A  E  E  L  D  L  Q  S  M  A  T  L  T  S  T  W  F  L  *  Q  M  L  E  V  Q  G  M  Y  I  Q  Y  T  *  R  V  Q  E  L  N  G  N  Q  C  Q  E  I  G  A  K  I  G  R  I  T  L  T  L  T  A  K  A  C  P  L  R  S  L  Q  A  M  V  A  L  L  F  H  T  M  Q  L  L  V  L  G  H  L  V  R  H  F  L  E  D  N  S  V  K  T  Q  H  I  L  *  E  K  K  I  R  I  F  K  V  Y  Y  L  L  I  Y  Y  S  K  S  F  A  L  N  L  R  V  L  L  T  K  I  F  G  E  K  R  S  L  A  L  F  V  H  C  K  I  G  H  S  I  V  E  V  K  R  I  D  L  A  Y  S  F  L  G  G  Y  *  R  L  G  G  G  S  C  E  L  L  L  L  N  L  I  V  *  I  A  F  T  V  L  C  A  *  K  K  N  I  Y  F  F  F  L  L  Q  K  S  *  A  L  I  M  V  S  M  Y  V  P  I  V  S  S  Y  L  F  V  R  K  C  Y  Y  N  N  K  R  K  L  Q  V  V  L  G  A  M  S  Y  K  E  H  S  L  P  Y  H  F  L  M  M  S  S  S  K  Y  E  S  F  Y  Y  K  </first_frame>
            <second_frame>  L  V  P  L  F  I  L  H  D  C  *  Y  L  H  F  L  T  I  P  S  F  L  K  Q  T  H  R  N  F  I  F  L :   F  K  N  G  S  F  S  Y  P  F  N  G  N  F  P  H  V  S  I  S  P  W  L  W  W  L  D  Q  C  T  C  H  F  L  R  W  R  R  C  F  W  N  Y  G :   W  C  L  W  L  R  K  F  I  Q  H  G  I  R  N  E  H  C  C  V  E  Y  C  S  V  Q  Q  R  V  E  L  W  S  V  F  S  A  N  V  C  E  C  G  A  V  L  P  A  R  H  N  Y  G  N  S  H  Q  F  L  S  T  R  R  M  V  *  S  S  T  P  S  F  *  S  L  S  T  Y  L  L  A  H  C  S  I  *  S  W  H  S  S  C  C  L  *  K  :  G  T  L  Q  K  K  R  R  N  *  I  Y  N  Q  W  P  L  L  L  Q  L  G  S  C  N  K  C  W  R  F  R  G  C  T  F  S  I  H  K  G  F  K  N  S  M  A  T  N  V  K  K  L  G  P  K  L  A  E  *  R  L  P  *  R  P  K  L  V  L  *  G  H  Y  R  R  W  S  H  C  C  F  I  Q  C  S  S  *  F  L  V  I  W  S  D  I  F  W  R  T  I  P  L  K  R  N  I  F  F  K  K  K  K  S  E  F  S  K  Y  T  T  C  *  Y  I  I  L  R  V  L  P  *  I  *  G  F  Y  S  P  K  Y  L  G  K  S  A  V  W  H  F  L  S  I  V  K  L  V  I  Q  L  W  K  *  K  E  L  I  W  P  T  L  F  W  V  V  I  N  V  *  G  A  A  V  V  S  F  Y  C  S  I  *  *  Y  K  *  H  L  R  Y  C  V  H  R  R  K  I  S  I  F  F  F  Y  C  K  R  A  K  H  *  L  W  *  V  C  M  Y  Q  L  S  L  A  I  C  L  *  E  N  V  T  I  I  I  K  G  N  S  K  L  Y  *  V  Q  C  L  I  K  S  I  L  Y  L  T  I  S  *  *  C  L  L  L  N  M  R  V  F  T  I  K </second_frame>
            <third_frame>   *  F  L  Y  L  F  S  T  I  A  D  I  F  I  S  *  L  Y  P  R  S  S  S  K  H  I  E  T  L  F  F   : C  S  K  M  A  L  L  A  I  L  L  M  G  I  S  L  M  F  Q  S  A  H  G  Y  G  G  W  I  N  A  H  A  T  F  Y  G  G  G  D  A  S  G  T  M   : G  G  A  C  G  Y  G  N  L  Y  S  T  G  Y  G  T  N  T  A  A  L  S  T  A  L  F  N  N  G  L  S  C  G  A  C  F  Q  L  M  C  V  N  A  G  Q  Y  C  L  P  G  I  I  T  V  T  A  T  N  F  C  P  P  G  G  W  C  D  P  P  R  P  H  F  D  L  S  Q  P  I  F  L  R  I  A  Q  Y  R  A  G  I  V  P  V  A  Y  R  R :   V  P  C  R  R  S  G  G  I  R  F  T  I  N  G  H  S  Y  F  N  L  V  L  V  T  N  V  G  G  S  G  D  V  H  S  V  Y  I  K  G  S  R  T  Q  W  Q  P  M  S  R  N  W  G  Q  N  W  Q  N  N  A  Y  L  N  G  Q  S  L  S  F  K  V  T  T  G  D  G  R  T  V  V  S  Y  N  A  A  P  S  S  W  S  F  G  Q  T  F  S  G  G  Q  F  R  *  N  A  T  Y  S  L  R  K  K  N  Q  N  F  Q  S  I  L  L  A  N  I  L  F  *  E  F  C  L  K  F  E  G  F  T  H  Q  N  I  W  G  K  A  Q  F  G  T  F  C  P  L  *  N  W  S  F  N  C  G  S  K  K  N  *  F  G  L  L  F  F  G  W  L  L  T  F  R  G  R  Q  L  *  A  F  T  A  Q  F  N  S  I  N  S  I  Y  G  I  V  C  I  E  E  K  Y  L  F  F  F  F  T  A  K  E  L  S  T  N  Y  G  E  Y  V  C  T  N  C  L  *  L  F  V  C  K  K  M  L  L  *  *  *  K  E  T  P  S  C  T  R  C  N  V  L  *  R  A  F  S  T  L  P  F  L  N  D  V  F  F  *  I  *  E  F  L  L  *   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0054K23.1" strand="-"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="76205" stop="76160"/>
                    <exon start="76071" stop="75940"/>
                    <exon start="75862" stop="75574"/>
                    <exon start="75455" stop="75149"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>771</number_coding_nucleotides>
                  <number_encoded_amino_acids>257</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LYPRSSSKHIETLFFCSKMALLAILLMGISLMFQSAHGYGGWINAHATFYGGGDASGTMGGACGYGNLYSTGYGTNTAALSTALFNNGLSCGACFQLMCVNAGQYCLPGIITVTATNFCPPGGWCDPPRPHFDLSQPIFLRIAQYRAGIVPVAYRRVPCRRSGGIRFTINGHSYFNLVLVTNVGGSGDVHSVYIKGSRTQWQPMSRNWGQNWQNNAYLNGQSLSFKVTTGDGRTVVSYNAAPSSWSFGQTFSGGQFR*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0054K23.1" strand="-"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="75129" stop="74929"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>198</number_coding_nucleotides>
                  <number_encoded_amino_acids>66</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EKKIRIFKVYYLLIYYSKSFALNLRVLLTKIFGEKRSLALFVHCKIGHSIVEVKRIDLAYSFLGGY*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="76255" e_stop="76160"/>
            <exon e_start="76071" e_stop="75940"/>
            <exon e_start="75862" e_stop="75574"/>
            <exon e_start="75455" e_stop="74952"/>
            <exon e_start="73712" e_stop="73660"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.404" acc_prob="0.916" e_score="0.979"/>
          <exon-intron don_prob="0.993" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.996"/>
          <exon-only e_score="0.755"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.979">
            <gDNA_exon_boundary e_start="76255" e_stop="76160" e_length="96"/>
          </exon>
          <intron i_serial="1" don_prob="0.404" acc_prob="0.916">
            <gDNA_intron_boundary i_start="76159" i_stop="76072" i_length="88"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="76071" e_stop="75940" e_length="132"/>
          </exon>
          <intron i_serial="2" don_prob="0.993" acc_prob="1.000">
            <gDNA_intron_boundary i_start="75939" i_stop="75863" i_length="77"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="75862" e_stop="75574" e_length="289"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="1.000">
            <gDNA_intron_boundary i_start="75573" i_stop="75456" i_length="118"/>
          </intron>
          <exon e_serial="4" e_score="0.996">
            <gDNA_exon_boundary e_start="75455" e_stop="74952" e_length="504"/>
          </exon>
          <intron i_serial="4" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="74951" i_stop="73713" i_length="1239"/>
          </intron>
          <exon e_serial="5" e_score="0.755">
            <gDNA_exon_boundary e_start="73712" e_stop="73660" e_length="53"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76255" stop="76160"/>
              <exon start="76071" stop="75940"/>
              <exon start="75862" stop="75687"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E367501" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76224" stop="76160"/>
              <exon start="76071" stop="75940"/>
              <exon start="75862" stop="75574"/>
              <exon start="75455" stop="75131"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E708188" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76224" stop="76160"/>
              <exon start="76071" stop="75940"/>
              <exon start="75862" stop="75574"/>
              <exon start="75455" stop="75285"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E344318" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76223" stop="76160"/>
              <exon start="76071" stop="75940"/>
              <exon start="75862" stop="75574"/>
              <exon start="75455" stop="75027"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E708293" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76200" stop="76160"/>
              <exon start="76071" stop="75940"/>
              <exon start="75862" stop="75574"/>
              <exon start="75455" stop="75080"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E698918" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76195" stop="76160"/>
              <exon start="76071" stop="75940"/>
              <exon start="75862" stop="75574"/>
              <exon start="75455" stop="75079"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E705776" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76191" stop="76160"/>
              <exon start="76071" stop="75940"/>
              <exon start="75862" stop="75574"/>
              <exon start="75455" stop="75297"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E393990" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76190" stop="76160"/>
              <exon start="76071" stop="75940"/>
              <exon start="75862" stop="75574"/>
              <exon start="75455" stop="75342"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E201919" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76188" stop="76160"/>
              <exon start="76071" stop="75940"/>
              <exon start="75862" stop="75574"/>
              <exon start="75455" stop="75448"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E225143" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76187" stop="76160"/>
              <exon start="76071" stop="75940"/>
              <exon start="75862" stop="75574"/>
              <exon start="75455" stop="75031"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E700772" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76187" stop="76160"/>
              <exon start="76071" stop="75940"/>
              <exon start="75862" stop="75636"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E697422" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76184" stop="76160"/>
              <exon start="76071" stop="75940"/>
              <exon start="75862" stop="75574"/>
              <exon start="75455" stop="75376"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E245993" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76184" stop="76160"/>
              <exon start="76071" stop="75940"/>
              <exon start="75862" stop="75574"/>
              <exon start="75455" stop="75434"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E225542" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76183" stop="76160"/>
              <exon start="76071" stop="75940"/>
              <exon start="75862" stop="75574"/>
              <exon start="75455" stop="75008"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E738456" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76183" stop="76160"/>
              <exon start="76071" stop="75940"/>
              <exon start="75862" stop="75574"/>
              <exon start="75455" stop="75089"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E726890" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76175" stop="76160"/>
              <exon start="76071" stop="75940"/>
              <exon start="75862" stop="75574"/>
              <exon start="75455" stop="75007"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E701084" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76175" stop="76160"/>
              <exon start="76071" stop="75940"/>
              <exon start="75862" stop="75739"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E244470" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76174" stop="76160"/>
              <exon start="76071" stop="75940"/>
              <exon start="75862" stop="75574"/>
              <exon start="75455" stop="75342"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E366452" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76059" stop="75940"/>
              <exon start="75862" stop="75574"/>
              <exon start="75455" stop="75027"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E704988" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75849" stop="75574"/>
              <exon start="75455" stop="75091"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E211454" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75723" stop="75574"/>
              <exon start="75455" stop="75238"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E393254" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75722" stop="75574"/>
              <exon start="75455" stop="75086"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E208328" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75709" stop="75574"/>
              <exon start="75455" stop="74953"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E355097" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75709" stop="75574"/>
              <exon start="75455" stop="74954"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E354489" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75597" stop="75574"/>
              <exon start="75455" stop="74952"/>
              <exon start="73712" stop="73660"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E692656" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTTAGTTCCTCTATTTATTCTCCACGATTGCTGATATCTTCATTTCCTAACTATACCCTCGTTCCTCAAGCAAACACATAGAAACTTTATTTTTTT : GTTCAAAAATGGCTCTTTTAGCTATCCTTTTAATGGGAATTTCCCTCATGTTTCAATCAGCCCATGGCTATGGTGGTTGGATCAATGCACATGCCACTTTTTACGGTGGAGGAGATGCTTCTGGAACTATGG : GTGGTGCTTGTGGTTACGGAAATTTATACAGCACGGGATACGGAACGAACACTGCTGCGTTGAGTACTGCTCTGTTCAACAACGGGTTGAGCTGTGGAGCGTGTTTTCAGCTAATGTGTGTGAATGCGGGGCAGTACTGCCTGCCAGGCATAATTACGGTAACAGCCACCAATTTCTGTCCACCAGGAGGATGGTGTGATCCTCCACGCCCTCATTTTGATCTCTCTCAACCTATCTTCTTGCGCATTGCTCAATATAGAGCTGGCATAGTTCCTGTTGCCTATAGAAG : GGTACCCTGCAGAAGAAGCGGAGGAATTAGATTTACAATCAATGGCCACTCTTACTTCAACTTGGTTCTTGTAACAAATGTTGGAGGTTCAGGGGATGTACATTCAGTATACATAAAGGGTTCAAGAACTCAATGGCAACCAATGTCAAGAAATTGGGGCCAAAATTGGCAGAATAACGCTTACCTTAACGGCCAAAGCTTGTCCTTTAAGGTCACTACAGGCGATGGTCGCACTGTTGTTTCATACAATGCAGCTCCTAGTTCTTGGTCATTTGGTCAGACATTTTCTGGAGGACAATTCCGTTAAAACGCAACATATTCTTTAAGAAAAAAAAATCAGAATTTTCAAAGTATACTACTTGCTAATATATTATTCTAAGAGTTTTGCCTTAAATTTGAGGGTTTTACTCACCAAAATATTTGGGGAAAAGCGCAGTTTGGCACTTTTTGTCCATTGTAAAATTGGTCATTCAATTGTGGAAGTAAAAAGAATTGATTTGGCCT : AATAATAATTGAAAAAAATTAAAAATAAATAAACCATAAAAATAAAAATAAAA</gDNA_template>
            <first_frame> F  S  S  S  I  Y  S  P  R  L  L  I  S  S  F  P  N  Y  T  L  V  P  Q  A  N  T  *  K  L  Y  F  F  :  V  Q  K  W  L  F  *  L  S  F  *  W  E  F  P  S  C  F  N  Q  P  M  A  M  V  V  G  S  M  H  M  P  L  F  T  V  E  E  M  L  L  E  L  W  :  V  V  L  V  V  T  E  I  Y  T  A  R  D  T  E  R  T  L  L  R  *  V  L  L  C  S  T  T  G  *  A  V  E  R  V  F  S  *  C  V  *  M  R  G  S  T  A  C  Q  A  *  L  R  *  Q  P  P  I  S  V  H  Q  E  D  G  V  I  L  H  A  L  I  L  I  S  L  N  L  S  S  C  A  L  L  N  I  E  L  A  *  F  L  L  P  I  E   : G  Y  P  A  E  E  A  E  E  L  D  L  Q  S  M  A  T  L  T  S  T  W  F  L  *  Q  M  L  E  V  Q  G  M  Y  I  Q  Y  T  *  R  V  Q  E  L  N  G  N  Q  C  Q  E  I  G  A  K  I  G  R  I  T  L  T  L  T  A  K  A  C  P  L  R  S  L  Q  A  M  V  A  L  L  F  H  T  M  Q  L  L  V  L  G  H  L  V  R  H  F  L  E  D  N  S  V  K  T  Q  H  I  L  *  E  K  K  I  R  I  F  K  V  Y  Y  L  L  I  Y  Y  S  K  S  F  A  L  N  L  R  V  L  L  T  K  I  F  G  E  K  R  S  L  A  L  F  V  H  C  K  I  G  H  S  I  V  E  V  K  R  I  D  L  A   : *  *  *  L  K  K  I  K  N  K  *  T  I  K  I  K  I  K </first_frame>
            <second_frame>  L  V  P  L  F  I  L  H  D  C  *  Y  L  H  F  L  T  I  P  S  F  L  K  Q  T  H  R  N  F  I  F  L :   F  K  N  G  S  F  S  Y  P  F  N  G  N  F  P  H  V  S  I  S  P  W  L  W  W  L  D  Q  C  T  C  H  F  L  R  W  R  R  C  F  W  N  Y  G :   W  C  L  W  L  R  K  F  I  Q  H  G  I  R  N  E  H  C  C  V  E  Y  C  S  V  Q  Q  R  V  E  L  W  S  V  F  S  A  N  V  C  E  C  G  A  V  L  P  A  R  H  N  Y  G  N  S  H  Q  F  L  S  T  R  R  M  V  *  S  S  T  P  S  F  *  S  L  S  T  Y  L  L  A  H  C  S  I  *  S  W  H  S  S  C  C  L  *  K  :  G  T  L  Q  K  K  R  R  N  *  I  Y  N  Q  W  P  L  L  L  Q  L  G  S  C  N  K  C  W  R  F  R  G  C  T  F  S  I  H  K  G  F  K  N  S  M  A  T  N  V  K  K  L  G  P  K  L  A  E  *  R  L  P  *  R  P  K  L  V  L  *  G  H  Y  R  R  W  S  H  C  C  F  I  Q  C  S  S  *  F  L  V  I  W  S  D  I  F  W  R  T  I  P  L  K  R  N  I  F  F  K  K  K  K  S  E  F  S  K  Y  T  T  C  *  Y  I  I  L  R  V  L  P  *  I  *  G  F  Y  S  P  K  Y  L  G  K  S  A  V  W  H  F  L  S  I  V  K  L  V  I  Q  L  W  K  *  K  E  L  I  W  P  :  N  N  N  *  K  K  L  K  I  N  K  P  *  K  *  K  *   </second_frame>
            <third_frame>   *  F  L  Y  L  F  S  T  I  A  D  I  F  I  S  *  L  Y  P  R  S  S  S  K  H  I  E  T  L  F  F   : C  S  K  M  A  L  L  A  I  L  L  M  G  I  S  L  M  F  Q  S  A  H  G  Y  G  G  W  I  N  A  H  A  T  F  Y  G  G  G  D  A  S  G  T  M   : G  G  A  C  G  Y  G  N  L  Y  S  T  G  Y  G  T  N  T  A  A  L  S  T  A  L  F  N  N  G  L  S  C  G  A  C  F  Q  L  M  C  V  N  A  G  Q  Y  C  L  P  G  I  I  T  V  T  A  T  N  F  C  P  P  G  G  W  C  D  P  P  R  P  H  F  D  L  S  Q  P  I  F  L  R  I  A  Q  Y  R  A  G  I  V  P  V  A  Y  R  R :   V  P  C  R  R  S  G  G  I  R  F  T  I  N  G  H  S  Y  F  N  L  V  L  V  T  N  V  G  G  S  G  D  V  H  S  V  Y  I  K  G  S  R  T  Q  W  Q  P  M  S  R  N  W  G  Q  N  W  Q  N  N  A  Y  L  N  G  Q  S  L  S  F  K  V  T  T  G  D  G  R  T  V  V  S  Y  N  A  A  P  S  S  W  S  F  G  Q  T  F  S  G  G  Q  F  R  *  N  A  T  Y  S  L  R  K  K  N  Q  N  F  Q  S  I  L  L  A  N  I  L  F  *  E  F  C  L  K  F  E  G  F  T  H  Q  N  I  W  G  K  A  Q  F  G  T  F  C  P  L  *  N  W  S  F  N  C  G  S  K  K  N  *  F  G  L :   I  I  I  E  K  N  *  K  *  I  N  H  K  N  K  N  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0054K23.1" strand="-"/>
                <serials PGL_serial="15" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="76205" stop="76160"/>
                    <exon start="76071" stop="75940"/>
                    <exon start="75862" stop="75574"/>
                    <exon start="75455" stop="75149"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>771</number_coding_nucleotides>
                  <number_encoded_amino_acids>257</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LYPRSSSKHIETLFFCSKMALLAILLMGISLMFQSAHGYGGWINAHATFYGGGDASGTMGGACGYGNLYSTGYGTNTAALSTALFNNGLSCGACFQLMCVNAGQYCLPGIITVTATNFCPPGGWCDPPRPHFDLSQPIFLRIAQYRAGIVPVAYRRVPCRRSGGIRFTINGHSYFNLVLVTNVGGSGDVHSVYIKGSRTQWQPMSRNWGQNWQNNAYLNGQSLSFKVTTGDGRTVVSYNAAPSSWSFGQTFSGGQFR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="76192" e_stop="76160"/>
            <exon e_start="76071" e_stop="75574"/>
            <exon e_start="75455" e_stop="74625"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.404" acc_prob="0.916" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="0.988"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="76192" e_stop="76160" e_length="33"/>
          </exon>
          <intron i_serial="1" don_prob="0.404" acc_prob="0.916">
            <gDNA_intron_boundary i_start="76159" i_stop="76072" i_length="88"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="76071" e_stop="75574" e_length="498"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="1.000">
            <gDNA_intron_boundary i_start="75573" i_stop="75456" i_length="118"/>
          </intron>
          <exon e_serial="3" e_score="0.988">
            <gDNA_exon_boundary e_start="75455" e_stop="74625" e_length="831"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76192" stop="76160"/>
              <exon start="76071" stop="75574"/>
              <exon start="75455" stop="75205"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E704000" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76186" stop="76160"/>
              <exon start="76071" stop="75574"/>
              <exon start="75455" stop="75383"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E346437" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75849" stop="75574"/>
              <exon start="75455" stop="75091"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E211454" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75808" stop="75574"/>
              <exon start="75455" stop="74945"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E731100" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75723" stop="75574"/>
              <exon start="75455" stop="75238"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E393254" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75722" stop="75574"/>
              <exon start="75455" stop="75086"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E208328" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75709" stop="75574"/>
              <exon start="75455" stop="74953"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E355097" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75709" stop="75574"/>
              <exon start="75455" stop="74954"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E354489" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75394" stop="74951"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E354889" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75382" stop="74701"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E393805" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75352" stop="74709"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E578424" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75280" stop="74815"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E244787" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75186" stop="74709"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E363859" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75129" stop="74625"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E367088" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75127" stop="74700"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E393469" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CCTCAAGCAAACACATAGAAACTTTATTTTTTT : GTTCAAAAATGGCTCTTTTAGCTATCCTTTTAATGGGAATTTCCCTCATGTTTCAATCAGCCCATGGCTATGGTGGTTGGATCAATGCACATGCCACTTTTTACGGTGGAGGAGATGCTTCTGGAACTATGGGTACTACAATTTTTCACTTGAGCCTAAGCTTGTAGTCATGTAAAAAAACTACTGAAATCGTGTGTGGATTTTGACAGGTGGTGCTTGTGGTTACGGAAATTTATACAGCACGGGATACGGAACGAACACTGCTGCGTTGAGTACTGCTCTGTTCAACAACGGGTTGAGCTGTGGAGCGTGTTTTCAGCTAATGTGTGTGAATGCGGGGCAGTACTGCCTGCCAGGCATAATTACGGTAACAGCCACCAATTTCTGTCCACCAGGAGGATGGTGTGATCCTCCACGCCCTCATTTTGATCTCTCTCAACCTATCTTCTTGCGCATTGCTCAATATAGAGCTGGCATAGTTCCTGTTGCCTATAGAAG : GGTACCCTGCAGAAGAAGCGGAGGAATTAGATTTACAATCAATGGCCACTCTTACTTCAACTTGGTTCTTGTAACAAATGTTGGAGGTTCAGGGGATGTACATTCAGTATACATAAAGGGTTCAAGAACTCAATGGCAACCAATGTCAAGAAATTGGGGCCAAAATTGGCAGAATAACGCTTACCTTAACGGCCAAAGCTTGTCCTTTAAGGTCACTACAGGCGATGGTCGCACTGTTGTTTCATACAATGCAGCTCCTAGTTCTTGGTCATTTGGTCAGACATTTTCTGGAGGACAATTCCGTTAAAACGCAACATATTCTTTAAGAAAAAAAAATCAGAATTTTCAAAGTATACTACTTGCTAATATATTATTCTAAGAGTTTTGCCTTAAATTTGAGGGTTTTACTCACCAAAATATTTGGGGAAAAGCGCAGTTTGGCACTTTTTGTCCATTGTAAAATTGGTCATTCAATTGTGGAAGTAAAAAGAATTGATTTGGCCTACTCTTTTTTGGGTGGTTATTAACGTTTAGGGGGCGGCAGTTGTGAGCTTTTACTGCTCAATTTAATAGTATAAATAGCATTTACGGTATTGTGTGCATAGAAGAAAAATATCTATTTTTTTTTTTTACTGCAAAAGAGCTAAGCACTAATTATGGTGAGTATGTATGTACCAATTGTCTCTAGCTATTTGTTTGTAAGAAAATGTTACTATAATAATAAAAGGAAACTCCAAGTTGTACTAGGTGCAATGTCTTATAAAGAGCATTCTCTACCTTACCATTTCTTAATGATGTCTTCTTCTAAATATGAGAGTTTTTACTATAAAA</gDNA_template>
            <first_frame> P  Q  A  N  T  *  K  L  Y  F  F  :  V  Q  K  W  L  F  *  L  S  F  *  W  E  F  P  S  C  F  N  Q  P  M  A  M  V  V  G  S  M  H  M  P  L  F  T  V  E  E  M  L  L  E  L  W  V  L  Q  F  F  T  *  A  *  A  C  S  H  V  K  K  L  L  K  S  C  V  D  F  D  R  W  C  L  W  L  R  K  F  I  Q  H  G  I  R  N  E  H  C  C  V  E  Y  C  S  V  Q  Q  R  V  E  L  W  S  V  F  S  A  N  V  C  E  C  G  A  V  L  P  A  R  H  N  Y  G  N  S  H  Q  F  L  S  T  R  R  M  V  *  S  S  T  P  S  F  *  S  L  S  T  Y  L  L  A  H  C  S  I  *  S  W  H  S  S  C  C  L  *  K  :  G  T  L  Q  K  K  R  R  N  *  I  Y  N  Q  W  P  L  L  L  Q  L  G  S  C  N  K  C  W  R  F  R  G  C  T  F  S  I  H  K  G  F  K  N  S  M  A  T  N  V  K  K  L  G  P  K  L  A  E  *  R  L  P  *  R  P  K  L  V  L  *  G  H  Y  R  R  W  S  H  C  C  F  I  Q  C  S  S  *  F  L  V  I  W  S  D  I  F  W  R  T  I  P  L  K  R  N  I  F  F  K  K  K  K  S  E  F  S  K  Y  T  T  C  *  Y  I  I  L  R  V  L  P  *  I  *  G  F  Y  S  P  K  Y  L  G  K  S  A  V  W  H  F  L  S  I  V  K  L  V  I  Q  L  W  K  *  K  E  L  I  W  P  T  L  F  W  V  V  I  N  V  *  G  A  A  V  V  S  F  Y  C  S  I  *  *  Y  K  *  H  L  R  Y  C  V  H  R  R  K  I  S  I  F  F  F  Y  C  K  R  A  K  H  *  L  W  *  V  C  M  Y  Q  L  S  L  A  I  C  L  *  E  N  V  T  I  I  I  K  G  N  S  K  L  Y  *  V  Q  C  L  I  K  S  I  L  Y  L  T  I  S  *  *  C  L  L  L  N  M  R  V  F  T  I  K </first_frame>
            <second_frame>  L  K  Q  T  H  R  N  F  I  F  L :   F  K  N  G  S  F  S  Y  P  F  N  G  N  F  P  H  V  S  I  S  P  W  L  W  W  L  D  Q  C  T  C  H  F  L  R  W  R  R  C  F  W  N  Y  G  Y  Y  N  F  S  L  E  P  K  L  V  V  M  *  K  N  Y  *  N  R  V  W  I  L  T  G  G  A  C  G  Y  G  N  L  Y  S  T  G  Y  G  T  N  T  A  A  L  S  T  A  L  F  N  N  G  L  S  C  G  A  C  F  Q  L  M  C  V  N  A  G  Q  Y  C  L  P  G  I  I  T  V  T  A  T  N  F  C  P  P  G  G  W  C  D  P  P  R  P  H  F  D  L  S  Q  P  I  F  L  R  I  A  Q  Y  R  A  G  I  V  P  V  A  Y  R  R :   V  P  C  R  R  S  G  G  I  R  F  T  I  N  G  H  S  Y  F  N  L  V  L  V  T  N  V  G  G  S  G  D  V  H  S  V  Y  I  K  G  S  R  T  Q  W  Q  P  M  S  R  N  W  G  Q  N  W  Q  N  N  A  Y  L  N  G  Q  S  L  S  F  K  V  T  T  G  D  G  R  T  V  V  S  Y  N  A  A  P  S  S  W  S  F  G  Q  T  F  S  G  G  Q  F  R  *  N  A  T  Y  S  L  R  K  K  N  Q  N  F  Q  S  I  L  L  A  N  I  L  F  *  E  F  C  L  K  F  E  G  F  T  H  Q  N  I  W  G  K  A  Q  F  G  T  F  C  P  L  *  N  W  S  F  N  C  G  S  K  K  N  *  F  G  L  L  F  F  G  W  L  L  T  F  R  G  R  Q  L  *  A  F  T  A  Q  F  N  S  I  N  S  I  Y  G  I  V  C  I  E  E  K  Y  L  F  F  F  F  T  A  K  E  L  S  T  N  Y  G  E  Y  V  C  T  N  C  L  *  L  F  V  C  K  K  M  L  L  *  *  *  K  E  T  P  S  C  T  R  C  N  V  L  *  R  A  F  S  T  L  P  F  L  N  D  V  F  F  *  I  *  E  F  L  L  *   </second_frame>
            <third_frame>   S  S  K  H  I  E  T  L  F  F   : C  S  K  M  A  L  L  A  I  L  L  M  G  I  S  L  M  F  Q  S  A  H  G  Y  G  G  W  I  N  A  H  A  T  F  Y  G  G  G  D  A  S  G  T  M  G  T  T  I  F  H  L  S  L  S  L  *  S  C  K  K  T  T  E  I  V  C  G  F  *  Q  V  V  L  V  V  T  E  I  Y  T  A  R  D  T  E  R  T  L  L  R  *  V  L  L  C  S  T  T  G  *  A  V  E  R  V  F  S  *  C  V  *  M  R  G  S  T  A  C  Q  A  *  L  R  *  Q  P  P  I  S  V  H  Q  E  D  G  V  I  L  H  A  L  I  L  I  S  L  N  L  S  S  C  A  L  L  N  I  E  L  A  *  F  L  L  P  I  E   : G  Y  P  A  E  E  A  E  E  L  D  L  Q  S  M  A  T  L  T  S  T  W  F  L  *  Q  M  L  E  V  Q  G  M  Y  I  Q  Y  T  *  R  V  Q  E  L  N  G  N  Q  C  Q  E  I  G  A  K  I  G  R  I  T  L  T  L  T  A  K  A  C  P  L  R  S  L  Q  A  M  V  A  L  L  F  H  T  M  Q  L  L  V  L  G  H  L  V  R  H  F  L  E  D  N  S  V  K  T  Q  H  I  L  *  E  K  K  I  R  I  F  K  V  Y  Y  L  L  I  Y  Y  S  K  S  F  A  L  N  L  R  V  L  L  T  K  I  F  G  E  K  R  S  L  A  L  F  V  H  C  K  I  G  H  S  I  V  E  V  K  R  I  D  L  A  Y  S  F  L  G  G  Y  *  R  L  G  G  G  S  C  E  L  L  L  L  N  L  I  V  *  I  A  F  T  V  L  C  A  *  K  K  N  I  Y  F  F  F  L  L  Q  K  S  *  A  L  I  M  V  S  M  Y  V  P  I  V  S  S  Y  L  F  V  R  K  C  Y  Y  N  N  K  R  K  L  Q  V  V  L  G  A  M  S  Y  K  E  H  S  L  P  Y  H  F  L  M  M  S  S  S  K  Y  E  S  F  Y  Y  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0054K23.1" strand="-"/>
                <serials PGL_serial="15" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="75884" stop="75574"/>
                    <exon start="75455" stop="75149"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>615</number_coding_nucleotides>
                  <number_encoded_amino_acids>205</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NRVWILTGGACGYGNLYSTGYGTNTAALSTALFNNGLSCGACFQLMCVNAGQYCLPGIITVTATNFCPPGGWCDPPRPHFDLSQPIFLRIAQYRAGIVPVAYRRVPCRRSGGIRFTINGHSYFNLVLVTNVGGSGDVHSVYIKGSRTQWQPMSRNWGQNWQNNAYLNGQSLSFKVTTGDGRTVVSYNAAPSSWSFGQTFSGGQFR*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0054K23.1" strand="-"/>
                <serials PGL_serial="15" AGS_serial="3" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="76191" stop="76160"/>
                    <exon start="76071" stop="75897"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>204</number_coding_nucleotides>
                  <number_encoded_amino_acids>68</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LKQTHRNFIFLFKNGSFSYPFNGNFPHVSISPWLWWLDQCTCHFLRWRRCFWNYGYYNFSLEPKLVVM*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0054K23.1" strand="-"/>
                <serials PGL_serial="15" AGS_serial="3" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="75129" stop="74929"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>198</number_coding_nucleotides>
                  <number_encoded_amino_acids>66</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EKKIRIFKVYYLLIYYSKSFALNLRVLLTKIFGEKRSLALFVHCKIGHSIVEVKRIDLAYSFLGGY*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="4">
          <exon_coordinates>
            <exon e_start="75464" e_stop="74625"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="75464" e_stop="74625" e_length="840"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75464" stop="74712"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E716402" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75394" stop="74951"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E354889" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75382" stop="74701"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E393805" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75352" stop="74709"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E578424" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75280" stop="74815"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E244787" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75186" stop="74709"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E363859" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75129" stop="74625"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E367088" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75127" stop="74700"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E393469" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="4" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GTTTTACAGGGTACCCTGCAGAAGAAGCGGAGGAATTAGATTTACAATCAATGGCCACTCTTACTTCAACTTGGTTCTTGTAACAAATGTTGGAGGTTCAGGGGATGTACATTCAGTATACATAAAGGGTTCAAGAACTCAATGGCAACCAATGTCAAGAAATTGGGGCCAAAATTGGCAGAATAACGCTTACCTTAACGGCCAAAGCTTGTCCTTTAAGGTCACTACAGGCGATGGTCGCACTGTTGTTTCATACAATGCAGCTCCTAGTTCTTGGTCATTTGGTCAGACATTTTCTGGAGGACAATTCCGTTAAAACGCAACATATTCTTTAAGAAAAAAAAATCAGAATTTTCAAAGTATACTACTTGCTAATATATTATTCTAAGAGTTTTGCCTTAAATTTGAGGGTTTTACTCACCAAAATATTTGGGGAAAAGCGCAGTTTGGCACTTTTTGTCCATTGTAAAATTGGTCATTCAATTGTGGAAGTAAAAAGAATTGATTTGGCCTACTCTTTTTTGGGTGGTTATTAACGTTTAGGGGGCGGCAGTTGTGAGCTTTTACTGCTCAATTTAATAGTATAAATAGCATTTACGGTATTGTGTGCATAGAAGAAAAATATCTATTTTTTTTTTTTACTGCAAAAGAGCTAAGCACTAATTATGGTGAGTATGTATGTACCAATTGTCTCTAGCTATTTGTTTGTAAGAAAATGTTACTATAATAATAAAAGGAAACTCCAAGTTGTACTAGGTGCAATGTCTTATAAAGAGCATTCTCTACCTTACCATTTCTTAATGATGTCTTCTTCTAAATATGAGAGTTTTTACTATAAAA</gDNA_template>
            <first_frame> V  L  Q  G  T  L  Q  K  K  R  R  N  *  I  Y  N  Q  W  P  L  L  L  Q  L  G  S  C  N  K  C  W  R  F  R  G  C  T  F  S  I  H  K  G  F  K  N  S  M  A  T  N  V  K  K  L  G  P  K  L  A  E  *  R  L  P  *  R  P  K  L  V  L  *  G  H  Y  R  R  W  S  H  C  C  F  I  Q  C  S  S  *  F  L  V  I  W  S  D  I  F  W  R  T  I  P  L  K  R  N  I  F  F  K  K  K  K  S  E  F  S  K  Y  T  T  C  *  Y  I  I  L  R  V  L  P  *  I  *  G  F  Y  S  P  K  Y  L  G  K  S  A  V  W  H  F  L  S  I  V  K  L  V  I  Q  L  W  K  *  K  E  L  I  W  P  T  L  F  W  V  V  I  N  V  *  G  A  A  V  V  S  F  Y  C  S  I  *  *  Y  K  *  H  L  R  Y  C  V  H  R  R  K  I  S  I  F  F  F  Y  C  K  R  A  K  H  *  L  W  *  V  C  M  Y  Q  L  S  L  A  I  C  L  *  E  N  V  T  I  I  I  K  G  N  S  K  L  Y  *  V  Q  C  L  I  K  S  I  L  Y  L  T  I  S  *  *  C  L  L  L  N  M  R  V  F  T  I  K </first_frame>
            <second_frame>  F  Y  R  V  P  C  R  R  S  G  G  I  R  F  T  I  N  G  H  S  Y  F  N  L  V  L  V  T  N  V  G  G  S  G  D  V  H  S  V  Y  I  K  G  S  R  T  Q  W  Q  P  M  S  R  N  W  G  Q  N  W  Q  N  N  A  Y  L  N  G  Q  S  L  S  F  K  V  T  T  G  D  G  R  T  V  V  S  Y  N  A  A  P  S  S  W  S  F  G  Q  T  F  S  G  G  Q  F  R  *  N  A  T  Y  S  L  R  K  K  N  Q  N  F  Q  S  I  L  L  A  N  I  L  F  *  E  F  C  L  K  F  E  G  F  T  H  Q  N  I  W  G  K  A  Q  F  G  T  F  C  P  L  *  N  W  S  F  N  C  G  S  K  K  N  *  F  G  L  L  F  F  G  W  L  L  T  F  R  G  R  Q  L  *  A  F  T  A  Q  F  N  S  I  N  S  I  Y  G  I  V  C  I  E  E  K  Y  L  F  F  F  F  T  A  K  E  L  S  T  N  Y  G  E  Y  V  C  T  N  C  L  *  L  F  V  C  K  K  M  L  L  *  *  *  K  E  T  P  S  C  T  R  C  N  V  L  *  R  A  F  S  T  L  P  F  L  N  D  V  F  F  *  I  *  E  F  L  L  *   </second_frame>
            <third_frame>   F  T  G  Y  P  A  E  E  A  E  E  L  D  L  Q  S  M  A  T  L  T  S  T  W  F  L  *  Q  M  L  E  V  Q  G  M  Y  I  Q  Y  T  *  R  V  Q  E  L  N  G  N  Q  C  Q  E  I  G  A  K  I  G  R  I  T  L  T  L  T  A  K  A  C  P  L  R  S  L  Q  A  M  V  A  L  L  F  H  T  M  Q  L  L  V  L  G  H  L  V  R  H  F  L  E  D  N  S  V  K  T  Q  H  I  L  *  E  K  K  I  R  I  F  K  V  Y  Y  L  L  I  Y  Y  S  K  S  F  A  L  N  L  R  V  L  L  T  K  I  F  G  E  K  R  S  L  A  L  F  V  H  C  K  I  G  H  S  I  V  E  V  K  R  I  D  L  A  Y  S  F  L  G  G  Y  *  R  L  G  G  G  S  C  E  L  L  L  L  N  L  I  V  *  I  A  F  T  V  L  C  A  *  K  K  N  I  Y  F  F  F  L  L  Q  K  S  *  A  L  I  M  V  S  M  Y  V  P  I  V  S  S  Y  L  F  V  R  K  C  Y  Y  N  N  K  R  K  L  Q  V  V  L  G  A  M  S  Y  K  E  H  S  L  P  Y  H  F  L  M  M  S  S  S  K  Y  E  S  F  Y  Y  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0054K23.1" strand="-"/>
                <serials PGL_serial="15" AGS_serial="4" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="75463" stop="75149"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>312</number_coding_nucleotides>
                  <number_encoded_amino_acids>104</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FYRVPCRRSGGIRFTINGHSYFNLVLVTNVGGSGDVHSVYIKGSRTQWQPMSRNWGQNWQNNAYLNGQSLSFKVTTGDGRTVVSYNAAPSSWSFGQTFSGGQFR*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0054K23.1" strand="-"/>
                <serials PGL_serial="15" AGS_serial="4" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="75129" stop="74929"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>198</number_coding_nucleotides>
                  <number_encoded_amino_acids>66</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EKKIRIFKVYYLLIYYSKSFALNLRVLLTKIFGEKRSLALFVHCKIGHSIVEVKRIDLAYSFLGGY*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="16" PGL_strand="+" PGL_start="74716" PGL_stop="75457"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="74716" e_stop="75457"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.906"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.906">
            <gDNA_exon_boundary e_start="74716" e_stop="75457" e_length="742"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="74716" stop="75457"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E432761" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="16" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AACTTGGAGTTTCCTTTTATTATTATAGTAACATTTTCTTACAAACAAATAGCTAGAGACAATTGGTACATACATACTCACCATAATTAGTGCTTAGCTCTTTTGCAGTAAAAAAAAAAAATAGATATTTTTCTTCTATGCACACAATACCGTAAATGCTATTTATACTATTAAATTGAGCAGTAAAAGCTCACAACTGCCGCCCCCTAAACGTTAATAACCACCCAAAAAAGAGTAGGCCAAATCAATTCTTTTTACTTCCACAATTGAATGACCAATTTTACAATGGACAAAAAGTGCCAAACTGCGCTTTTCCCCAAATATTTTGGTGAGTAAAACCCTCAAATTTAAGGCAAAACTCTTAGAATAATATATTAGCAAGTAGTATACTTTGAAAATTCTGATTTTTTTTTCTTAAAGAATATGTTGCGTTTTAACGGAATTGTCCTCCAGAAAATGTCTGACCAAATGACCAAGAACTAGGAGCTGCATTGTATGAAACAACAGTGCGACCATCGCCTGTAGTGACCTTAAAGGACAAGCTTTGGCCGTTAAGGTAAGCGTTATTCTGCCAATTTTGGCCCCAATTTCTTGACATTGGTTGCCATTGAGTTCTTGAACCCTTTATGTATACTGAATGTACATCCCCTGAACCTCCAACATTTGTTACAAGAACCAAGTTGAAGTAAGAGTGGCCATTGATTGTAAATCTAATTCCTCCGCTTCTTCTGCAGGGTACCCT</gDNA_template>
            <first_frame> N  L  E  F  P  F  I  I  I  V  T  F  S  Y  K  Q  I  A  R  D  N  W  Y  I  H  T  H  H  N  *  C  L  A  L  L  Q  *  K  K  K  I  D  I  F  L  L  C  T  Q  Y  R  K  C  Y  L  Y  Y  *  I  E  Q  *  K  L  T  T  A  A  P  *  T  L  I  T  T  Q  K  R  V  G  Q  I  N  S  F  Y  F  H  N  *  M  T  N  F  T  M  D  K  K  C  Q  T  A  L  F  P  K  Y  F  G  E  *  N  P  Q  I  *  G  K  T  L  R  I  I  Y  *  Q  V  V  Y  F  E  N  S  D  F  F  F  L  K  N  M  L  R  F  N  G  I  V  L  Q  K  M  S  D  Q  M  T  K  N  *  E  L  H  C  M  K  Q  Q  C  D  H  R  L  *  *  P  *  R  T  S  F  G  R  *  G  K  R  Y  S  A  N  F  G  P  N  F  L  T  L  V  A  I  E  F  L  N  P  L  C  I  L  N  V  H  P  L  N  L  Q  H  L  L  Q  E  P  S  *  S  K  S  G  H  *  L  *  I  *  F  L  R  F  F  C  R  V  P  </first_frame>
            <second_frame>  T  W  S  F  L  L  L  L  *  *  H  F  L  T  N  K  *  L  E  T  I  G  T  Y  I  L  T  I  I  S  A  *  L  F  C  S  K  K  K  K  *  I  F  F  F  Y  A  H  N  T  V  N  A  I  Y  T  I  K  L  S  S  K  S  S  Q  L  P  P  P  K  R  *  *  P  P  K  K  E  *  A  K  S  I  L  F  T  S  T  I  E  *  P  I  L  Q  W  T  K  S  A  K  L  R  F  S  P  N  I  L  V  S  K  T  L  K  F  K  A  K  L  L  E  *  Y  I  S  K  *  Y  T  L  K  I  L  I  F  F  S  *  R  I  C  C  V  L  T  E  L  S  S  R  K  C  L  T  K  *  P  R  T  R  S  C  I  V  *  N  N  S  A  T  I  A  C  S  D  L  K  G  Q  A  L  A  V  K  V  S  V  I  L  P  I  L  A  P  I  S  *  H  W  L  P  L  S  S  *  T  L  Y  V  Y  *  M  Y  I  P  *  T  S  N  I  C  Y  K  N  Q  V  E  V  R  V  A  I  D  C  K  S  N  S  S  A  S  S  A  G  Y  P </second_frame>
            <third_frame>   L  G  V  S  F  Y  Y  Y  S  N  I  F  L  Q  T  N  S  *  R  Q  L  V  H  T  Y  S  P  *  L  V  L  S  S  F  A  V  K  K  K  N  R  Y  F  S  S  M  H  T  I  P  *  M  L  F  I  L  L  N  *  A  V  K  A  H  N  C  R  P  L  N  V  N  N  H  P  K  K  S  R  P  N  Q  F  F  L  L  P  Q  L  N  D  Q  F  Y  N  G  Q  K  V  P  N  C  A  F  P  Q  I  F  W  *  V  K  P  S  N  L  R  Q  N  S  *  N  N  I  L  A  S  S  I  L  *  K  F  *  F  F  F  L  K  E  Y  V  A  F  *  R  N  C  P  P  E  N  V  *  P  N  D  Q  E  L  G  A  A  L  Y  E  T  T  V  R  P  S  P  V  V  T  L  K  D  K  L  W  P  L  R  *  A  L  F  C  Q  F  W  P  Q  F  L  D  I  G  C  H  *  V  L  E  P  F  M  Y  T  E  C  T  S  P  E  P  P  T  F  V  T  R  T  K  L  K  *  E  W  P  L  I  V  N  L  I  P  P  L  L  L  Q  G  T   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0054K23.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="17" PGL_strand="-" PGL_start="90390" PGL_stop="81110"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="90377" e_stop="90124"/>
            <exon e_start="89532" e_stop="89323"/>
            <exon e_start="88621" e_stop="88559"/>
            <exon e_start="88462" e_stop="88389"/>
            <exon e_start="87114" e_stop="87019"/>
            <exon e_start="85639" e_stop="85582"/>
            <exon e_start="85510" e_stop="85406"/>
            <exon e_start="85313" e_stop="85232"/>
            <exon e_start="82999" e_stop="82887"/>
            <exon e_start="82706" e_stop="82631"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.971" acc_prob="0.959" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.927" e_score="1.000"/>
          <exon-intron don_prob="0.978" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.689" acc_prob="0.907" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.718" e_score="1.000"/>
          <exon-intron don_prob="0.975" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.963" acc_prob="0.990" e_score="1.000"/>
          <exon-intron don_prob="0.475" acc_prob="0.997" e_score="1.000"/>
          <exon-only e_score="0.934"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="90377" e_stop="90124" e_length="254"/>
          </exon>
          <intron i_serial="1" don_prob="0.971" acc_prob="0.959">
            <gDNA_intron_boundary i_start="90123" i_stop="89533" i_length="591"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="89532" e_stop="89323" e_length="210"/>
          </exon>
          <intron i_serial="2" don_prob="0.995" acc_prob="0.927">
            <gDNA_intron_boundary i_start="89322" i_stop="88622" i_length="701"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="88621" e_stop="88559" e_length="63"/>
          </exon>
          <intron i_serial="3" don_prob="0.978" acc_prob="0.997">
            <gDNA_intron_boundary i_start="88558" i_stop="88463" i_length="96"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="88462" e_stop="88389" e_length="74"/>
          </exon>
          <intron i_serial="4" don_prob="0.689" acc_prob="0.907">
            <gDNA_intron_boundary i_start="88388" i_stop="87115" i_length="1274"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="87114" e_stop="87019" e_length="96"/>
          </exon>
          <intron i_serial="5" don_prob="0.997" acc_prob="0.998">
            <gDNA_intron_boundary i_start="87018" i_stop="85640" i_length="1379"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="85639" e_stop="85582" e_length="58"/>
          </exon>
          <intron i_serial="6" don_prob="1.000" acc_prob="0.718">
            <gDNA_intron_boundary i_start="85581" i_stop="85511" i_length="71"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="85510" e_stop="85406" e_length="105"/>
          </exon>
          <intron i_serial="7" don_prob="0.975" acc_prob="0.995">
            <gDNA_intron_boundary i_start="85405" i_stop="85314" i_length="92"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="85313" e_stop="85232" e_length="82"/>
          </exon>
          <intron i_serial="8" don_prob="0.963" acc_prob="0.990">
            <gDNA_intron_boundary i_start="85231" i_stop="83000" i_length="2232"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="82999" e_stop="82887" e_length="113"/>
          </exon>
          <intron i_serial="9" don_prob="0.475" acc_prob="0.997">
            <gDNA_intron_boundary i_start="82886" i_stop="82707" i_length="180"/>
          </intron>
          <exon e_serial="10" e_score="0.934">
            <gDNA_exon_boundary e_start="82706" e_stop="82631" e_length="76"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90377" stop="90124"/>
              <exon start="89532" stop="89323"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E482515" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90376" stop="90124"/>
              <exon start="89532" stop="89323"/>
              <exon start="88621" stop="88559"/>
              <exon start="88462" stop="88403"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E565217" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90374" stop="90124"/>
              <exon start="89532" stop="89323"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E248228" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90364" stop="90124"/>
              <exon start="89532" stop="89323"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E205207" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="89532" stop="89323"/>
              <exon start="88621" stop="88559"/>
              <exon start="88462" stop="88389"/>
              <exon start="87114" stop="87019"/>
              <exon start="85639" stop="85582"/>
              <exon start="85510" stop="85504"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E268745" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="89404" stop="89323"/>
              <exon start="88621" stop="88559"/>
              <exon start="88462" stop="88389"/>
              <exon start="87114" stop="87019"/>
              <exon start="85639" stop="85582"/>
              <exon start="85510" stop="85406"/>
              <exon start="85313" stop="85232"/>
              <exon start="82999" stop="82978"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E255667" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="89404" stop="89323"/>
              <exon start="88621" stop="88559"/>
              <exon start="88462" stop="88389"/>
              <exon start="87114" stop="87019"/>
              <exon start="85639" stop="85582"/>
              <exon start="85510" stop="85406"/>
              <exon start="85313" stop="85271"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E260218" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="89391" stop="89323"/>
              <exon start="88621" stop="88559"/>
              <exon start="88462" stop="88389"/>
              <exon start="87114" stop="87019"/>
              <exon start="85639" stop="85582"/>
              <exon start="85510" stop="85406"/>
              <exon start="85313" stop="85232"/>
              <exon start="82999" stop="82887"/>
              <exon start="82706" stop="82631"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E592238" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="17" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GAAAAGAACAAGTTCTCAAAGTCCGTTAAAAAAAATAGCCCGACGGTGGGAATCGTAACCCTAATCGGCCGATGTCAACATCCGGGCAACAGCAGTTCCGGTACACGCAGACACCGTCGAAAGTTCTTCACCTCCGGAATCTTCCATGGGATTGCAGCGATGAAGAGCTAGTAGAGCTTTGCAAGCCCTTTGGTAAAATTGTCAATACAAAGTGTAACGTCGGGGCCAATCGCAACCAAGCGTTTGTCGAATTT : GCTGACCTTAATCAGGCAATCAATATGGTTTCATATTATGCTTCATCTTCAGAGCCTGCTCAAGTTCGTGGCAAGACGGTGTACATTCAATATTCTAATAGGAATGAAATTGTCAATAATAAGAGTCCGGGAGATGTTCCAGGAAATGTTTTGCTGGTGACTATCGAGGGTGTTGAAGCTGGTGATGTCAGTATCGATGTCATTCATTTG : GTATTTTCAGCCTTTGGTTTTGTTCAAAAGATTGCTACTTTTGAAAAGGCTGCAGGTTTTCAG : GCATTGATTCAATTTAGTGATGTTGGGACAGCATCTGCTGCTAGAGAGGCATTGGATGGGAGAAGTATACCAAA : GTACCTGCTTCCAGAACATGTTAATCATTGTCACTTGCGCATCTCATATTCAGCACACACGGATCTTAATATCAAGTTTCAATCTCATCGAAGCAG : GGACTACACAAACCCTTATCTCCCAGTAAATCCTACTGCAATGGAGGGGGTTCTTCAG : CCTGTTGTAGGTCCAGATGGAAAGAAAAAGGAACCCGAGAGTAATGTGCTTTTTGCCTCTTTAGAAAATATGCAGTATGCTGTTACCGTTGATGTCCTTAACACG : GTTTTTTCTGCATTTGGTACTGTTCAGAAGATCGCTATATTTGAGAAGAATGGTCAAACCCAGGCATTAGTTCAGTATCCTG : ATGTAACAATTGCAGCTGCTGCAAAGGACGCTTTAGAGGGACACTGCATATATGATGGTGGCTATTGTAAGCTTCATCTATCATACTCTCGTCATACTGATCTGAATGTACAG : GCATACAGTGATAAAAGTAGAGACTACACAGTTCCAGAATCAAGTTTGCTTGCGATGCAACAAGCATCTGCAGTCC</gDNA_template>
            <first_frame> E  K  N  K  F  S  K  S  V  K  K  N  S  P  T  V  G  I  V  T  L  I  G  R  C  Q  H  P  G  N  S  S  S  G  T  R  R  H  R  R  K  F  F  T  S  G  I  F  H  G  I  A  A  M  K  S  *  *  S  F  A  S  P  L  V  K  L  S  I  Q  S  V  T  S  G  P  I  A  T  K  R  L  S  N  L :   L  T  L  I  R  Q  S  I  W  F  H  I  M  L  H  L  Q  S  L  L  K  F  V  A  R  R  C  T  F  N  I  L  I  G  M  K  L  S  I  I  R  V  R  E  M  F  Q  E  M  F  C  W  *  L  S  R  V  L  K  L  V  M  S  V  S  M  S  F  I  W :   Y  F  Q  P  L  V  L  F  K  R  L  L  L  L  K  R  L  Q  V  F  R :   H  *  F  N  L  V  M  L  G  Q  H  L  L  L  E  R  H  W  M  G  E  V  Y  Q   : S  T  C  F  Q  N  M  L  I  I  V  T  C  A  S  H  I  Q  H  T  R  I  L  I  S  S  F  N  L  I  E  A   : G  T  T  Q  T  L  I  S  Q  *  I  L  L  Q  W  R  G  F  F  S :   L  L  *  V  Q  M  E  R  K  R  N  P  R  V  M  C  F  L  P  L  *  K  I  C  S  M  L  L  P  L  M  S  L  T  R :   F  F  L  H  L  V  L  F  R  R  S  L  Y  L  R  R  M  V  K  P  R  H  *  F  S  I  L  :  M  *  Q  L  Q  L  L  Q  R  T  L  *  R  D  T  A  Y  M  M  V  A  I  V  S  F  I  Y  H  T  L  V  I  L  I  *  M  Y  R :   H  T  V  I  K  V  E  T  T  Q  F  Q  N  Q  V  C  L  R  C  N  K  H  L  Q  S </first_frame>
            <second_frame>  K  R  T  S  S  Q  S  P  L  K  K  I  A  R  R  W  E  S  *  P  *  S  A  D  V  N  I  R  A  T  A  V  P  V  H  A  D  T  V  E  S  S  S  P  P  E  S  S  M  G  L  Q  R  *  R  A  S  R  A  L  Q  A  L  W  *  N  C  Q  Y  K  V  *  R  R  G  Q  S  Q  P  S  V  C  R  I   : C  *  P  *  S  G  N  Q  Y  G  F  I  L  C  F  I  F  R  A  C  S  S  S  W  Q  D  G  V  H  S  I  F  *  *  E  *  N  C  Q  *  *  E  S  G  R  C  S  R  K  C  F  A  G  D  Y  R  G  C  *  S  W  *  C  Q  Y  R  C  H  S  F   : G  I  F  S  L  W  F  C  S  K  D  C  Y  F  *  K  G  C  R  F  S   : G  I  D  S  I  *  *  C  W  D  S  I  C  C  *  R  G  I  G  W  E  K  Y  T  K  :  V  P  A  S  R  T  C  *  S  L  S  L  A  H  L  I  F  S  T  H  G  S  *  Y  Q  V  S  I  S  S  K  Q  :  G  L  H  K  P  L  S  P  S  K  S  Y  C  N  G  G  G  S  S   : A  C  C  R  S  R  W  K  E  K  G  T  R  E  *  C  A  F  C  L  F  R  K  Y  A  V  C  C  Y  R  *  C  P  *  H   : G  F  F  C  I  W  Y  C  S  E  D  R  Y  I  *  E  E  W  S  N  P  G  I  S  S  V  S  * :   C  N  N  C  S  C  C  K  G  R  F  R  G  T  L  H  I  *  W  W  L  L  *  A  S  S  I  I  L  S  S  Y  *  S  E  C  T   : G  I  Q  *  *  K  *  R  L  H  S  S  R  I  K  F  A  C  D  A  T  S  I  C  S   </second_frame>
            <third_frame>   K  E  Q  V  L  K  V  R  *  K  K  *  P  D  G  G  N  R  N  P  N  R  P  M  S  T  S  G  Q  Q  Q  F  R  Y  T  Q  T  P  S  K  V  L  H  L  R  N  L  P  W  D  C  S  D  E  E  L  V  E  L  C  K  P  F  G  K  I  V  N  T  K  C  N  V  G  A  N  R  N  Q  A  F  V  E  F  :  A  D  L  N  Q  A  I  N  M  V  S  Y  Y  A  S  S  S  E  P  A  Q  V  R  G  K  T  V  Y  I  Q  Y  S  N  R  N  E  I  V  N  N  K  S  P  G  D  V  P  G  N  V  L  L  V  T  I  E  G  V  E  A  G  D  V  S  I  D  V  I  H  L  :  V  F  S  A  F  G  F  V  Q  K  I  A  T  F  E  K  A  A  G  F  Q  :  A  L  I  Q  F  S  D  V  G  T  A  S  A  A  R  E  A  L  D  G  R  S  I  P  K :   Y  L  L  P  E  H  V  N  H  C  H  L  R  I  S  Y  S  A  H  T  D  L  N  I  K  F  Q  S  H  R  S  R :   D  Y  T  N  P  Y  L  P  V  N  P  T  A  M  E  G  V  L  Q  :  P  V  V  G  P  D  G  K  K  K  E  P  E  S  N  V  L  F  A  S  L  E  N  M  Q  Y  A  V  T  V  D  V  L  N  T  :  V  F  S  A  F  G  T  V  Q  K  I  A  I  F  E  K  N  G  Q  T  Q  A  L  V  Q  Y  P   : D  V  T  I  A  A  A  A  K  D  A  L  E  G  H  C  I  Y  D  G  G  Y  C  K  L  H  L  S  Y  S  R  H  T  D  L  N  V  Q  :  A  Y  S  D  K  S  R  D  Y  T  V  P  E  S  S  L  L  A  M  Q  Q  A  S  A  V  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0054K23.1" strand="-"/>
                <serials PGL_serial="17" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="90339" stop="90124"/>
                    <exon start="89532" stop="89323"/>
                    <exon start="88621" stop="88559"/>
                    <exon start="88462" stop="88389"/>
                    <exon start="87114" stop="87019"/>
                    <exon start="85639" stop="85582"/>
                    <exon start="85510" stop="85406"/>
                    <exon start="85313" stop="85232"/>
                    <exon start="82999" stop="82887"/>
                    <exon start="82706" stop="82632"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1092</number_coding_nucleotides>
                  <number_encoded_amino_acids>364</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PDGGNRNPNRPMSTSGQQQFRYTQTPSKVLHLRNLPWDCSDEELVELCKPFGKIVNTKCNVGANRNQAFVEFADLNQAINMVSYYASSSEPAQVRGKTVYIQYSNRNEIVNNKSPGDVPGNVLLVTIEGVEAGDVSIDVIHLVFSAFGFVQKIATFEKAAGFQALIQFSDVGTASAAREALDGRSIPKYLLPEHVNHCHLRISYSAHTDLNIKFQSHRSRDYTNPYLPVNPTAMEGVLQPVVGPDGKKKEPESNVLFASLENMQYAVTVDVLNTVFSAFGTVQKIAIFEKNGQTQALVQYPDVTIAAAAKDALEGHCIYDGGYCKLHLSYSRHTDLNVQAYSDKSRDYTVPESSLLAMQQASAV</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="90377" e_stop="90124"/>
            <exon e_start="89532" e_stop="89323"/>
            <exon e_start="88621" e_stop="88559"/>
            <exon e_start="88462" e_stop="88389"/>
            <exon e_start="87114" e_stop="87019"/>
            <exon e_start="86851" e_stop="86799"/>
            <exon e_start="85639" e_stop="85582"/>
            <exon e_start="85510" e_stop="85406"/>
            <exon e_start="85313" e_stop="85232"/>
            <exon e_start="82999" e_stop="82934"/>
            <exon e_start="82706" e_stop="82627"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.971" acc_prob="0.959" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.927" e_score="1.000"/>
          <exon-intron don_prob="0.978" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.689" acc_prob="0.907" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.716" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.718" e_score="1.000"/>
          <exon-intron don_prob="0.975" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.963" acc_prob="0.990" e_score="1.000"/>
          <exon-intron don_prob="0.965" acc_prob="0.997" e_score="0.985"/>
          <exon-only e_score="0.925"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="90377" e_stop="90124" e_length="254"/>
          </exon>
          <intron i_serial="1" don_prob="0.971" acc_prob="0.959">
            <gDNA_intron_boundary i_start="90123" i_stop="89533" i_length="591"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="89532" e_stop="89323" e_length="210"/>
          </exon>
          <intron i_serial="2" don_prob="0.995" acc_prob="0.927">
            <gDNA_intron_boundary i_start="89322" i_stop="88622" i_length="701"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="88621" e_stop="88559" e_length="63"/>
          </exon>
          <intron i_serial="3" don_prob="0.978" acc_prob="0.997">
            <gDNA_intron_boundary i_start="88558" i_stop="88463" i_length="96"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="88462" e_stop="88389" e_length="74"/>
          </exon>
          <intron i_serial="4" don_prob="0.689" acc_prob="0.907">
            <gDNA_intron_boundary i_start="88388" i_stop="87115" i_length="1274"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="87114" e_stop="87019" e_length="96"/>
          </exon>
          <intron i_serial="5" don_prob="0.997" acc_prob="0.998">
            <gDNA_intron_boundary i_start="87018" i_stop="86852" i_length="167"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="86851" e_stop="86799" e_length="53"/>
          </exon>
          <intron i_serial="6" don_prob="0.716" acc_prob="0.998">
            <gDNA_intron_boundary i_start="86798" i_stop="85640" i_length="1159"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="85639" e_stop="85582" e_length="58"/>
          </exon>
          <intron i_serial="7" don_prob="1.000" acc_prob="0.718">
            <gDNA_intron_boundary i_start="85581" i_stop="85511" i_length="71"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="85510" e_stop="85406" e_length="105"/>
          </exon>
          <intron i_serial="8" don_prob="0.975" acc_prob="0.995">
            <gDNA_intron_boundary i_start="85405" i_stop="85314" i_length="92"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="85313" e_stop="85232" e_length="82"/>
          </exon>
          <intron i_serial="9" don_prob="0.963" acc_prob="0.990">
            <gDNA_intron_boundary i_start="85231" i_stop="83000" i_length="2232"/>
          </intron>
          <exon e_serial="10" e_score="0.985">
            <gDNA_exon_boundary e_start="82999" e_stop="82934" e_length="66"/>
          </exon>
          <intron i_serial="10" don_prob="0.965" acc_prob="0.997">
            <gDNA_intron_boundary i_start="82933" i_stop="82707" i_length="227"/>
          </intron>
          <exon e_serial="11" e_score="0.925">
            <gDNA_exon_boundary e_start="82706" e_stop="82627" e_length="80"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90377" stop="90124"/>
              <exon start="89532" stop="89323"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E482515" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90376" stop="90124"/>
              <exon start="89532" stop="89323"/>
              <exon start="88621" stop="88559"/>
              <exon start="88462" stop="88403"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E565217" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90374" stop="90124"/>
              <exon start="89532" stop="89323"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E248228" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90364" stop="90124"/>
              <exon start="89532" stop="89323"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E205207" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88606" stop="88559"/>
              <exon start="88462" stop="88389"/>
              <exon start="87114" stop="87019"/>
              <exon start="86851" stop="86799"/>
              <exon start="85639" stop="85582"/>
              <exon start="85510" stop="85406"/>
              <exon start="85313" stop="85232"/>
              <exon start="82999" stop="82934"/>
              <exon start="82706" stop="82627"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E315217" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="17" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GAAAAGAACAAGTTCTCAAAGTCCGTTAAAAAAAATAGCCCGACGGTGGGAATCGTAACCCTAATCGGCCGATGTCAACATCCGGGCAACAGCAGTTCCGGTACACGCAGACACCGTCGAAAGTTCTTCACCTCCGGAATCTTCCATGGGATTGCAGCGATGAAGAGCTAGTAGAGCTTTGCAAGCCCTTTGGTAAAATTGTCAATACAAAGTGTAACGTCGGGGCCAATCGCAACCAAGCGTTTGTCGAATTT : GCTGACCTTAATCAGGCAATCAATATGGTTTCATATTATGCTTCATCTTCAGAGCCTGCTCAAGTTCGTGGCAAGACGGTGTACATTCAATATTCTAATAGGAATGAAATTGTCAATAATAAGAGTCCGGGAGATGTTCCAGGAAATGTTTTGCTGGTGACTATCGAGGGTGTTGAAGCTGGTGATGTCAGTATCGATGTCATTCATTTG : GTATTTTCAGCCTTTGGTTTTGTTCAAAAGATTGCTACTTTTGAAAAGGCTGCAGGTTTTCAG : GCATTGATTCAATTTAGTGATGTTGGGACAGCATCTGCTGCTAGAGAGGCATTGGATGGGAGAAGTATACCAAA : GTACCTGCTTCCAGAACATGTTAATCATTGTCACTTGCGCATCTCATATTCAGCACACACGGATCTTAATATCAAGTTTCAATCTCATCGAAGCAG : GGTTTAGTGAAGCTCGGCAGCTAAAACACAGATGTGTTTGTCATGGCCTCGTA : GGACTACACAAACCCTTATCTCCCAGTAAATCCTACTGCAATGGAGGGGGTTCTTCAG : CCTGTTGTAGGTCCAGATGGAAAGAAAAAGGAACCCGAGAGTAATGTGCTTTTTGCCTCTTTAGAAAATATGCAGTATGCTGTTACCGTTGATGTCCTTAACACG : GTTTTTTCTGCATTTGGTACTGTTCAGAAGATCGCTATATTTGAGAAGAATGGTCAAACCCAGGCATTAGTTCAGTATCCTG : ATGTAACAATTGCAGCTGCTGCAAAGGACGCTTTAGAGGGACACTGCATATATGATGGTGGCTATT : GCATACAGTGATAAAAGTAGAGACTACACAGTTCCAGAATCAAGTTTGCTTGCGATGCAACAAGCATCTGCAGTCCATGC</gDNA_template>
            <first_frame> E  K  N  K  F  S  K  S  V  K  K  N  S  P  T  V  G  I  V  T  L  I  G  R  C  Q  H  P  G  N  S  S  S  G  T  R  R  H  R  R  K  F  F  T  S  G  I  F  H  G  I  A  A  M  K  S  *  *  S  F  A  S  P  L  V  K  L  S  I  Q  S  V  T  S  G  P  I  A  T  K  R  L  S  N  L :   L  T  L  I  R  Q  S  I  W  F  H  I  M  L  H  L  Q  S  L  L  K  F  V  A  R  R  C  T  F  N  I  L  I  G  M  K  L  S  I  I  R  V  R  E  M  F  Q  E  M  F  C  W  *  L  S  R  V  L  K  L  V  M  S  V  S  M  S  F  I  W :   Y  F  Q  P  L  V  L  F  K  R  L  L  L  L  K  R  L  Q  V  F  R :   H  *  F  N  L  V  M  L  G  Q  H  L  L  L  E  R  H  W  M  G  E  V  Y  Q   : S  T  C  F  Q  N  M  L  I  I  V  T  C  A  S  H  I  Q  H  T  R  I  L  I  S  S  F  N  L  I  E  A   : G  F  S  E  A  R  Q  L  K  H  R  C  V  C  H  G  L  V  :  G  L  H  K  P  L  S  P  S  K  S  Y  C  N  G  G  G  S  S   : A  C  C  R  S  R  W  K  E  K  G  T  R  E  *  C  A  F  C  L  F  R  K  Y  A  V  C  C  Y  R  *  C  P  *  H   : G  F  F  C  I  W  Y  C  S  E  D  R  Y  I  *  E  E  W  S  N  P  G  I  S  S  V  S  * :   C  N  N  C  S  C  C  K  G  R  F  R  G  T  L  H  I  *  W  W  L  L :   H  T  V  I  K  V  E  T  T  Q  F  Q  N  Q  V  C  L  R  C  N  K  H  L  Q  S  M  </first_frame>
            <second_frame>  K  R  T  S  S  Q  S  P  L  K  K  I  A  R  R  W  E  S  *  P  *  S  A  D  V  N  I  R  A  T  A  V  P  V  H  A  D  T  V  E  S  S  S  P  P  E  S  S  M  G  L  Q  R  *  R  A  S  R  A  L  Q  A  L  W  *  N  C  Q  Y  K  V  *  R  R  G  Q  S  Q  P  S  V  C  R  I   : C  *  P  *  S  G  N  Q  Y  G  F  I  L  C  F  I  F  R  A  C  S  S  S  W  Q  D  G  V  H  S  I  F  *  *  E  *  N  C  Q  *  *  E  S  G  R  C  S  R  K  C  F  A  G  D  Y  R  G  C  *  S  W  *  C  Q  Y  R  C  H  S  F   : G  I  F  S  L  W  F  C  S  K  D  C  Y  F  *  K  G  C  R  F  S   : G  I  D  S  I  *  *  C  W  D  S  I  C  C  *  R  G  I  G  W  E  K  Y  T  K  :  V  P  A  S  R  T  C  *  S  L  S  L  A  H  L  I  F  S  T  H  G  S  *  Y  Q  V  S  I  S  S  K  Q  :  G  L  V  K  L  G  S  *  N  T  D  V  F  V  M  A  S  * :   D  Y  T  N  P  Y  L  P  V  N  P  T  A  M  E  G  V  L  Q  :  P  V  V  G  P  D  G  K  K  K  E  P  E  S  N  V  L  F  A  S  L  E  N  M  Q  Y  A  V  T  V  D  V  L  N  T  :  V  F  S  A  F  G  T  V  Q  K  I  A  I  F  E  K  N  G  Q  T  Q  A  L  V  Q  Y  P   : D  V  T  I  A  A  A  A  K  D  A  L  E  G  H  C  I  Y  D  G  G  Y   : C  I  Q  *  *  K  *  R  L  H  S  S  R  I  K  F  A  C  D  A  T  S  I  C  S  P  C </second_frame>
            <third_frame>   K  E  Q  V  L  K  V  R  *  K  K  *  P  D  G  G  N  R  N  P  N  R  P  M  S  T  S  G  Q  Q  Q  F  R  Y  T  Q  T  P  S  K  V  L  H  L  R  N  L  P  W  D  C  S  D  E  E  L  V  E  L  C  K  P  F  G  K  I  V  N  T  K  C  N  V  G  A  N  R  N  Q  A  F  V  E  F  :  A  D  L  N  Q  A  I  N  M  V  S  Y  Y  A  S  S  S  E  P  A  Q  V  R  G  K  T  V  Y  I  Q  Y  S  N  R  N  E  I  V  N  N  K  S  P  G  D  V  P  G  N  V  L  L  V  T  I  E  G  V  E  A  G  D  V  S  I  D  V  I  H  L  :  V  F  S  A  F  G  F  V  Q  K  I  A  T  F  E  K  A  A  G  F  Q  :  A  L  I  Q  F  S  D  V  G  T  A  S  A  A  R  E  A  L  D  G  R  S  I  P  K :   Y  L  L  P  E  H  V  N  H  C  H  L  R  I  S  Y  S  A  H  T  D  L  N  I  K  F  Q  S  H  R  S  R :   V  *  *  S  S  A  A  K  T  Q  M  C  L  S  W  P  R   : R  T  T  Q  T  L  I  S  Q  *  I  L  L  Q  W  R  G  F  F  S :   L  L  *  V  Q  M  E  R  K  R  N  P  R  V  M  C  F  L  P  L  *  K  I  C  S  M  L  L  P  L  M  S  L  T  R :   F  F  L  H  L  V  L  F  R  R  S  L  Y  L  R  R  M  V  K  P  R  H  *  F  S  I  L  :  M  *  Q  L  Q  L  L  Q  R  T  L  *  R  D  T  A  Y  M  M  V  A  I  :  A  Y  S  D  K  S  R  D  Y  T  V  P  E  S  S  L  L  A  M  Q  Q  A  S  A  V  H   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0054K23.1" strand="-"/>
                <serials PGL_serial="17" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="90339" stop="90124"/>
                    <exon start="89532" stop="89323"/>
                    <exon start="88621" stop="88559"/>
                    <exon start="88462" stop="88389"/>
                    <exon start="87114" stop="87019"/>
                    <exon start="86851" stop="86845"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>663</number_coding_nucleotides>
                  <number_encoded_amino_acids>221</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PDGGNRNPNRPMSTSGQQQFRYTQTPSKVLHLRNLPWDCSDEELVELCKPFGKIVNTKCNVGANRNQAFVEFADLNQAINMVSYYASSSEPAQVRGKTVYIQYSNRNEIVNNKSPGDVPGNVLLVTIEGVEAGDVSIDVIHLVFSAFGFVQKIATFEKAAGFQALIQFSDVGTASAAREALDGRSIPKYLLPEHVNHCHLRISYSAHTDLNIKFQSHRSRV*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0054K23.1" strand="-"/>
                <serials PGL_serial="17" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="85638" stop="85582"/>
                    <exon start="85510" stop="85406"/>
                    <exon start="85313" stop="85232"/>
                    <exon start="82999" stop="82934"/>
                    <exon start="82706" stop="82696"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>318</number_coding_nucleotides>
                  <number_encoded_amino_acids>106</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DYTNPYLPVNPTAMEGVLQPVVGPDGKKKEPESNVLFASLENMQYAVTVDVLNTVFSAFGTVQKIAIFEKNGQTQALVQYPDVTIAAAAKDALEGHCIYDGGYCIQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="90390" e_stop="90124"/>
            <exon e_start="89532" e_stop="89323"/>
            <exon e_start="88843" e_stop="88757"/>
            <exon e_start="88621" e_stop="88559"/>
            <exon e_start="88462" e_stop="88389"/>
            <exon e_start="87114" e_stop="87019"/>
            <exon e_start="85639" e_stop="85622"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.971" acc_prob="0.959" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.953" acc_prob="0.927" e_score="1.000"/>
          <exon-intron don_prob="0.978" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.689" acc_prob="0.907" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.998" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="90390" e_stop="90124" e_length="267"/>
          </exon>
          <intron i_serial="1" don_prob="0.971" acc_prob="0.959">
            <gDNA_intron_boundary i_start="90123" i_stop="89533" i_length="591"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="89532" e_stop="89323" e_length="210"/>
          </exon>
          <intron i_serial="2" don_prob="0.995" acc_prob="0.000">
            <gDNA_intron_boundary i_start="89322" i_stop="88844" i_length="479"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="88843" e_stop="88757" e_length="87"/>
          </exon>
          <intron i_serial="3" don_prob="0.953" acc_prob="0.927">
            <gDNA_intron_boundary i_start="88756" i_stop="88622" i_length="135"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="88621" e_stop="88559" e_length="63"/>
          </exon>
          <intron i_serial="4" don_prob="0.978" acc_prob="0.997">
            <gDNA_intron_boundary i_start="88558" i_stop="88463" i_length="96"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="88462" e_stop="88389" e_length="74"/>
          </exon>
          <intron i_serial="5" don_prob="0.689" acc_prob="0.907">
            <gDNA_intron_boundary i_start="88388" i_stop="87115" i_length="1274"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="87114" e_stop="87019" e_length="96"/>
          </exon>
          <intron i_serial="6" don_prob="0.997" acc_prob="0.998">
            <gDNA_intron_boundary i_start="87018" i_stop="85640" i_length="1379"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="85639" e_stop="85622" e_length="18"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90390" stop="90124"/>
              <exon start="89532" stop="89323"/>
              <exon start="88843" stop="88757"/>
              <exon start="88621" stop="88611"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E333355" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90377" stop="90124"/>
              <exon start="89532" stop="89323"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E482515" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90374" stop="90124"/>
              <exon start="89532" stop="89323"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E248228" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90364" stop="90124"/>
              <exon start="89532" stop="89323"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E205207" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90148" stop="90124"/>
              <exon start="89532" stop="89323"/>
              <exon start="88843" stop="88757"/>
              <exon start="88621" stop="88559"/>
              <exon start="88462" stop="88389"/>
              <exon start="87114" stop="87019"/>
              <exon start="85639" stop="85622"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E272915" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="17" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GTCGAGTCCCAAAGAAAAGAACAAGTTCTCAAAGTCCGTTAAAAAAAATAGCCCGACGGTGGGAATCGTAACCCTAATCGGCCGATGTCAACATCCGGGCAACAGCAGTTCCGGTACACGCAGACACCGTCGAAAGTTCTTCACCTCCGGAATCTTCCATGGGATTGCAGCGATGAAGAGCTAGTAGAGCTTTGCAAGCCCTTTGGTAAAATTGTCAATACAAAGTGTAACGTCGGGGCCAATCGCAACCAAGCGTTTGTCGAATTT : GCTGACCTTAATCAGGCAATCAATATGGTTTCATATTATGCTTCATCTTCAGAGCCTGCTCAAGTTCGTGGCAAGACGGTGTACATTCAATATTCTAATAGGAATGAAATTGTCAATAATAAGAGTCCGGGAGATGTTCCAGGAAATGTTTTGCTGGTGACTATCGAGGGTGTTGAAGCTGGTGATGTCAGTATCGATGTCATTCATTTG : ATGGTCATTATTTAAGATCTTTTGTTGGAGACATTCTGGATATGTAATCATGTCGGTCATAAACCTTTCTATGGCTTGCATATACAG : GTATTTTCAGCCTTTGGTTTTGTTCAAAAGATTGCTACTTTTGAAAAGGCTGCAGGTTTTCAG : GCATTGATTCAATTTAGTGATGTTGGGACAGCATCTGCTGCTAGAGAGGCATTGGATGGGAGAAGTATACCAAA : GTACCTGCTTCCAGAACATGTTAATCATTGTCACTTGCGCATCTCATATTCAGCACACACGGATCTTAATATCAAGTTTCAATCTCATCGAAGCAG : GGACTACACAAACCCTTA</gDNA_template>
            <first_frame> V  E  S  Q  R  K  E  Q  V  L  K  V  R  *  K  K  *  P  D  G  G  N  R  N  P  N  R  P  M  S  T  S  G  Q  Q  Q  F  R  Y  T  Q  T  P  S  K  V  L  H  L  R  N  L  P  W  D  C  S  D  E  E  L  V  E  L  C  K  P  F  G  K  I  V  N  T  K  C  N  V  G  A  N  R  N  Q  A  F  V  E  F  :  A  D  L  N  Q  A  I  N  M  V  S  Y  Y  A  S  S  S  E  P  A  Q  V  R  G  K  T  V  Y  I  Q  Y  S  N  R  N  E  I  V  N  N  K  S  P  G  D  V  P  G  N  V  L  L  V  T  I  E  G  V  E  A  G  D  V  S  I  D  V  I  H  L  :  M  V  I  I  *  D  L  L  L  E  T  F  W  I  C  N  H  V  G  H  K  P  F  Y  G  L  H  I  Q  :  V  F  S  A  F  G  F  V  Q  K  I  A  T  F  E  K  A  A  G  F  Q  :  A  L  I  Q  F  S  D  V  G  T  A  S  A  A  R  E  A  L  D  G  R  S  I  P  K :   Y  L  L  P  E  H  V  N  H  C  H  L  R  I  S  Y  S  A  H  T  D  L  N  I  K  F  Q  S  H  R  S  R :   D  Y  T  N  P   </first_frame>
            <second_frame>  S  S  P  K  E  K  N  K  F  S  K  S  V  K  K  N  S  P  T  V  G  I  V  T  L  I  G  R  C  Q  H  P  G  N  S  S  S  G  T  R  R  H  R  R  K  F  F  T  S  G  I  F  H  G  I  A  A  M  K  S  *  *  S  F  A  S  P  L  V  K  L  S  I  Q  S  V  T  S  G  P  I  A  T  K  R  L  S  N  L :   L  T  L  I  R  Q  S  I  W  F  H  I  M  L  H  L  Q  S  L  L  K  F  V  A  R  R  C  T  F  N  I  L  I  G  M  K  L  S  I  I  R  V  R  E  M  F  Q  E  M  F  C  W  *  L  S  R  V  L  K  L  V  M  S  V  S  M  S  F  I  * :   W  S  L  F  K  I  F  C  W  R  H  S  G  Y  V  I  M  S  V  I  N  L  S  M  A  C  I  Y  R :   Y  F  Q  P  L  V  L  F  K  R  L  L  L  L  K  R  L  Q  V  F  R :   H  *  F  N  L  V  M  L  G  Q  H  L  L  L  E  R  H  W  M  G  E  V  Y  Q   : S  T  C  F  Q  N  M  L  I  I  V  T  C  A  S  H  I  Q  H  T  R  I  L  I  S  S  F  N  L  I  E  A   : G  T  T  Q  T  L  </second_frame>
            <third_frame>   R  V  P  K  K  R  T  S  S  Q  S  P  L  K  K  I  A  R  R  W  E  S  *  P  *  S  A  D  V  N  I  R  A  T  A  V  P  V  H  A  D  T  V  E  S  S  S  P  P  E  S  S  M  G  L  Q  R  *  R  A  S  R  A  L  Q  A  L  W  *  N  C  Q  Y  K  V  *  R  R  G  Q  S  Q  P  S  V  C  R  I   : C  *  P  *  S  G  N  Q  Y  G  F  I  L  C  F  I  F  R  A  C  S  S  S  W  Q  D  G  V  H  S  I  F  *  *  E  *  N  C  Q  *  *  E  S  G  R  C  S  R  K  C  F  A  G  D  Y  R  G  C  *  S  W  *  C  Q  Y  R  C  H  S  F   : D  G  H  Y  L  R  S  F  V  G  D  I  L  D  M  *  S  C  R  S  *  T  F  L  W  L  A  Y  T   : G  I  F  S  L  W  F  C  S  K  D  C  Y  F  *  K  G  C  R  F  S   : G  I  D  S  I  *  *  C  W  D  S  I  C  C  *  R  G  I  G  W  E  K  Y  T  K  :  V  P  A  S  R  T  C  *  S  L  S  L  A  H  L  I  F  S  T  H  G  S  *  Y  Q  V  S  I  S  S  K  Q  :  G  L  H  K  P  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0054K23.1" strand="-"/>
                <serials PGL_serial="17" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="90339" stop="90124"/>
                    <exon start="89532" stop="89323"/>
                    <exon start="88843" stop="88829"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>438</number_coding_nucleotides>
                  <number_encoded_amino_acids>146</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PDGGNRNPNRPMSTSGQQQFRYTQTPSKVLHLRNLPWDCSDEELVELCKPFGKIVNTKCNVGANRNQAFVEFADLNQAINMVSYYASSSEPAQVRGKTVYIQYSNRNEIVNNKSPGDVPGNVLLVTIEGVEAGDVSIDVIHLMVII*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0054K23.1" strand="-"/>
                <serials PGL_serial="17" AGS_serial="3" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="88828" stop="88757"/>
                    <exon start="88621" stop="88559"/>
                    <exon start="88462" stop="88389"/>
                    <exon start="87114" stop="87019"/>
                    <exon start="85639" stop="85624"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>321</number_coding_nucleotides>
                  <number_encoded_amino_acids>107</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DLLLETFWICNHVGHKPFYGLHIQVFSAFGFVQKIATFEKAAGFQALIQFSDVGTASAAREALDGRSIPKYLLPEHVNHCHLRISYSAHTDLNIKFQSHRSRDYTNP</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="4">
          <exon_coordinates>
            <exon e_start="83042" e_stop="82032"/>
            <exon e_start="81126" e_stop="81110"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.337" e_score="1.000"/>
          <exon-only e_score="0.706"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="83042" e_stop="82032" e_length="1011"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.337">
            <gDNA_intron_boundary i_start="82031" i_stop="81127" i_length="905"/>
          </intron>
          <exon e_serial="2" e_score="0.706">
            <gDNA_exon_boundary e_start="81126" e_stop="81110" e_length="17"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83042" stop="82179"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E551809" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82496" stop="82032"/>
              <exon start="81126" stop="81110"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E312572" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="17" AGS_serial="4" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ACCTATTGGAACATAAGGTGTTGATGGATCAGTTTTACTGCAGATGTAACAATTGCAGCTGCTGCAAAGGACGCTTTAGAGGGACACTGCATATATGATGGTGGCTATTGTAAGCTTCATCTATCATACTCTCGTCATACTGATCTGAATGTACAGGTATAGATATGTGCTTTTGAGTTGGTTTCGAAGGGAAAAAAGATGTCCCAATAAATAAAGAGTCGACACCATATTTTAAGATTCTATTACTGAAAGTATGCTTCTTGACACTTGTTGCTTCCTGCATCTTTTTCATTTGACCTCTTAGCTTGAATTAATTATTCAATTGTGTCTAATCAGGCATACAGTGATAAAAGTAGAGACTACACAGTTCCAGAATCAAGTTTGCTTGCGATGCAACAAGCATCTGCAGTCCATGCCGCACCAGCTGTTTGGCATAATCCTCAGTCTGGTCCAGTGCAGTCATCAGCTGGCTATGCCGCTACTGGTGCTGTTCCTGGCCAAGCACCACCACCTGCATGGAATCCAAATTTGCAGGGTGGAGGATCAACCTTTCCATCGGCTCCTACCGGATATCCAGGTCATTCATATGCTCCACCAGCTTATGCAACTGGAGTACATCCTATTGGATCGTCACAGCAGACCAATCACATTGCTACTGGTAGTCAACCTTTTACTGTAAGTCAGCCTTTTCATCCATCAACCATGCCGCCTGGAGGTGTTCCTCCTCCTGGGCATGCACCTTATCATGGTTAATAGGCTCCCATGGGGACATTGAAGCTGTTATTAATTTACGCTGGCTTAGGTTCTTGTTCAGTGTCGGCGTGGGCTTGTGATGTCATCTGTATACCTTCAGATTCTCTTCTTTCTTGAACTTCACTCTTGAATTTTAGTTTTTGGCCTTCTTGATGAACTGAGCTAATGTTTAATCTGAGTGTGGATTAAAATCATCTGTATAATGAGCTGCTTAGTAACAACGGTTTTTCTTATTGACATATTAGTATTGTTACTCTT : AATCACACAAAAAAATA</gDNA_template>
            <first_frame> T  Y  W  N  I  R  C  *  W  I  S  F  T  A  D  V  T  I  A  A  A  A  K  D  A  L  E  G  H  C  I  Y  D  G  G  Y  C  K  L  H  L  S  Y  S  R  H  T  D  L  N  V  Q  V  *  I  C  A  F  E  L  V  S  K  G  K  K  M  S  Q  *  I  K  S  R  H  H  I  L  R  F  Y  Y  *  K  Y  A  S  *  H  L  L  L  P  A  S  F  S  F  D  L  L  A  *  I  N  Y  S  I  V  S  N  Q  A  Y  S  D  K  S  R  D  Y  T  V  P  E  S  S  L  L  A  M  Q  Q  A  S  A  V  H  A  A  P  A  V  W  H  N  P  Q  S  G  P  V  Q  S  S  A  G  Y  A  A  T  G  A  V  P  G  Q  A  P  P  P  A  W  N  P  N  L  Q  G  G  G  S  T  F  P  S  A  P  T  G  Y  P  G  H  S  Y  A  P  P  A  Y  A  T  G  V  H  P  I  G  S  S  Q  Q  T  N  H  I  A  T  G  S  Q  P  F  T  V  S  Q  P  F  H  P  S  T  M  P  P  G  G  V  P  P  P  G  H  A  P  Y  H  G  *  *  A  P  M  G  T  L  K  L  L  L  I  Y  A  G  L  G  S  C  S  V  S  A  W  A  C  D  V  I  C  I  P  S  D  S  L  L  S  *  T  S  L  L  N  F  S  F  W  P  S  *  *  T  E  L  M  F  N  L  S  V  D  *  N  H  L  Y  N  E  L  L  S  N  N  G  F  S  Y  *  H  I  S  I  V  T  L  :  N  H  T  K  K   </first_frame>
            <second_frame>  P  I  G  T  *  G  V  D  G  S  V  L  L  Q  M  *  Q  L  Q  L  L  Q  R  T  L  *  R  D  T  A  Y  M  M  V  A  I  V  S  F  I  Y  H  T  L  V  I  L  I  *  M  Y  R  Y  R  Y  V  L  L  S  W  F  R  R  E  K  R  C  P  N  K  *  R  V  D  T  I  F  *  D  S  I  T  E  S  M  L  L  D  T  C  C  F  L  H  L  F  H  L  T  S  *  L  E  L  I  I  Q  L  C  L  I  R  H  T  V  I  K  V  E  T  T  Q  F  Q  N  Q  V  C  L  R  C  N  K  H  L  Q  S  M  P  H  Q  L  F  G  I  I  L  S  L  V  Q  C  S  H  Q  L  A  M  P  L  L  V  L  F  L  A  K  H  H  H  L  H  G  I  Q  I  C  R  V  E  D  Q  P  F  H  R  L  L  P  D  I  Q  V  I  H  M  L  H  Q  L  M  Q  L  E  Y  I  L  L  D  R  H  S  R  P  I  T  L  L  L  V  V  N  L  L  L  *  V  S  L  F  I  H  Q  P  C  R  L  E  V  F  L  L  L  G  M  H  L  I  M  V  N  R  L  P  W  G  H  *  S  C  Y  *  F  T  L  A  *  V  L  V  Q  C  R  R  G  L  V  M  S  S  V  Y  L  Q  I  L  F  F  L  E  L  H  S  *  I  L  V  F  G  L  L  D  E  L  S  *  C  L  I  *  V  W  I  K  I  I  C  I  M  S  C  L  V  T  T  V  F  L  I  D  I  L  V  L  L  L  L :   I  T  Q  K  N  </second_frame>
            <third_frame>   L  L  E  H  K  V  L  M  D  Q  F  Y  C  R  C  N  N  C  S  C  C  K  G  R  F  R  G  T  L  H  I  *  W  W  L  L  *  A  S  S  I  I  L  S  S  Y  *  S  E  C  T  G  I  D  M  C  F  *  V  G  F  E  G  K  K  D  V  P  I  N  K  E  S  T  P  Y  F  K  I  L  L  L  K  V  C  F  L  T  L  V  A  S  C  I  F  F  I  *  P  L  S  L  N  *  L  F  N  C  V  *  S  G  I  Q  *  *  K  *  R  L  H  S  S  R  I  K  F  A  C  D  A  T  S  I  C  S  P  C  R  T  S  C  L  A  *  S  S  V  W  S  S  A  V  I  S  W  L  C  R  Y  W  C  C  S  W  P  S  T  T  T  C  M  E  S  K  F  A  G  W  R  I  N  L  S  I  G  S  Y  R  I  S  R  S  F  I  C  S  T  S  L  C  N  W  S  T  S  Y  W  I  V  T  A  D  Q  S  H  C  Y  W  *  S  T  F  Y  C  K  S  A  F  S  S  I  N  H  A  A  W  R  C  S  S  S  W  A  C  T  L  S  W  L  I  G  S  H  G  D  I  E  A  V  I  N  L  R  W  L  R  F  L  F  S  V  G  V  G  L  *  C  H  L  Y  T  F  R  F  S  S  F  L  N  F  T  L  E  F  *  F  L  A  F  L  M  N  *  A  N  V  *  S  E  C  G  L  K  S  S  V  *  *  A  A  *  *  Q  R  F  F  L  L  T  Y  *  Y  C  Y  S   : *  S  H  K  K  I </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0054K23.1" strand="-"/>
                <serials PGL_serial="17" AGS_serial="4" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="82733" stop="82290"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>441</number_coding_nucleotides>
                  <number_encoded_amino_acids>147</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>INYSIVSNQAYSDKSRDYTVPESSLLAMQQASAVHAAPAVWHNPQSGPVQSSAGYAATGAVPGQAPPPAWNPNLQGGGSTFPSAPTGYPGHSYAPPAYATGVHPIGSSQQTNHIATGSQPFTVSQPFHPSTMPPGGVPPPGHAPYHG*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0054K23.1" strand="-"/>
                <serials PGL_serial="17" AGS_serial="4" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="82738" stop="82364"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>372</number_coding_nucleotides>
                  <number_encoded_amino_acids>124</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LELIIQLCLIRHTVIKVETTQFQNQVCLRCNKHLQSMPHQLFGIILSLVQCSHQLAMPLLVLFLAKHHHLHGIQICRVEDQPFHRLLPDIQVIHMLHQLMQLEYILLDRHSRPITLLLVVNLLL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="18" PGL_strand="+" PGL_start="98743" PGL_stop="100198"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="98743" e_stop="98781"/>
            <exon e_start="99515" e_stop="99525"/>
            <exon e_start="99770" e_stop="100093"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.910" acc_prob="0.000" e_score="0.487"/>
          <exon-intron don_prob="0.648" acc_prob="0.000" e_score="0.727"/>
          <exon-only e_score="0.991"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.487">
            <gDNA_exon_boundary e_start="98743" e_stop="98781" e_length="39"/>
          </exon>
          <intron i_serial="1" don_prob="0.910" acc_prob="0.000">
            <gDNA_intron_boundary i_start="98782" i_stop="99514" i_length="733"/>
          </intron>
          <exon e_serial="2" e_score="0.727">
            <gDNA_exon_boundary e_start="99515" e_stop="99525" e_length="11"/>
          </exon>
          <intron i_serial="2" don_prob="0.648" acc_prob="0.000">
            <gDNA_intron_boundary i_start="99526" i_stop="99769" i_length="244"/>
          </intron>
          <exon e_serial="3" e_score="0.991">
            <gDNA_exon_boundary e_start="99770" e_stop="100093" e_length="324"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98743" stop="98781"/>
              <exon start="99515" stop="99525"/>
              <exon start="99770" stop="100093"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E717430" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="18" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TATCCTTTGCTTACATTTTGATTTGTGAAGTTCATGGAT : GTTTATTTTTG : GATAAATCTACCAAAAACCTTTATTCTTAAAGCATGTATAAATACCACAATCGAAGTGCAAATAATAAAATTAGTTATGGATCAGCCACATATAGCTCTGTAAAATGATTTATTACAGACACCCAAAACATAGAAAAAAAAGTAAAGTCTAAAGGGAGATGAAACCTTCACGGACGAGAAGACCAAACATGAGAGTAACAAGACCTGTTGTTATGCTTTGTGTTGGAGTCATCCATGTCTGTGAATATGCTCCAAGCGTAAATGCAGCTCCAACTATTCCGATCAAGAACGACACCATGTTCTGATTCATTTTCTCTTTGTTTT</gDNA_template>
            <first_frame> Y  P  L  L  T  F  *  F  V  K  F  M  D  :  V  Y  F  W :   I  N  L  P  K  T  F  I  L  K  A  C  I  N  T  T  I  E  V  Q  I  I  K  L  V  M  D  Q  P  H  I  A  L  *  N  D  L  L  Q  T  P  K  T  *  K  K  K  *  S  L  K  G  D  E  T  F  T  D  E  K  T  K  H  E  S  N  K  T  C  C  Y  A  L  C  W  S  H  P  C  L  *  I  C  S  K  R  K  C  S  S  N  Y  S  D  Q  E  R  H  H  V  L  I  H  F  L  F  V   </first_frame>
            <second_frame>  I  L  C  L  H  F  D  L  *  S  S  W  M :   F  I  F   : G  *  I  Y  Q  K  P  L  F  L  K  H  V  *  I  P  Q  S  K  C  K  *  *  N  *  L  W  I  S  H  I  *  L  C  K  M  I  Y  Y  R  H  P  K  H  R  K  K  S  K  V  *  R  E  M  K  P  S  R  T  R  R  P  N  M  R  V  T  R  P  V  V  M  L  C  V  G  V  I  H  V  C  E  Y  A  P  S  V  N  A  A  P  T  I  P  I  K  N  D  T  M  F  *  F  I  F  S  L  F  </second_frame>
            <third_frame>   S  F  A  Y  I  L  I  C  E  V  H  G   : C  L  F  L  :  D  K  S  T  K  N  L  Y  S  *  S  M  Y  K  Y  H  N  R  S  A  N  N  K  I  S  Y  G  S  A  T  Y  S  S  V  K  *  F  I  T  D  T  Q  N  I  E  K  K  V  K  S  K  G  R  *  N  L  H  G  R  E  D  Q  T  *  E  *  Q  D  L  L  L  C  F  V  L  E  S  S  M  S  V  N  M  L  Q  A  *  M  Q  L  Q  L  F  R  S  R  T  T  P  C  S  D  S  F  S  L  C  F </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0054K23.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="99558" e_stop="99588"/>
            <exon e_start="99767" e_stop="100198"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.613"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.613">
            <gDNA_exon_boundary e_start="99558" e_stop="99588" e_length="31"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="99589" i_stop="99766" i_length="178"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="99767" e_stop="100198" e_length="432"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="99558" stop="99588"/>
              <exon start="99767" stop="100198"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E231422" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="18" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTTTAAATTCCTTTTTTCAAAATTTATTTTC : AAGGATAAATCTACCAAAAACCTTTATTCTTAAAGCATGTATAAATACCACAATCGAAGTGCAAATAATAAAATTAGTTATGGATCAGCCACATATAGCTCTGTAAAATGATTTATTACAGACACCCAAAACATAGAAAAAAAAGTAAAGTCTAAAGGGAGATGAAACCTTCACGGACGAGAAGACCAAACATGAGAGTAACAAGACCTGTTGTTATGCTTTGTGTTGGAGTCATCCATGTCTGTGAATATGCTCCAAGCGTAAATGCAGCTCCAACTATTCCGATCAAGAACGACACCATGTTCTGATTCATTTTCTCTTTGTTTTGTATTCTTAGCAAGCAATTAGAGTTGTTTGGTTGAATATAAATAAAGAGACAACTAATAACCATCCAGCTCTCTCAAGGGCCAAAGTCAACTTCACCTTGGGAAA</gDNA_template>
            <first_frame> F  *  I  P  F  F  K  I  Y  F   : Q  G  *  I  Y  Q  K  P  L  F  L  K  H  V  *  I  P  Q  S  K  C  K  *  *  N  *  L  W  I  S  H  I  *  L  C  K  M  I  Y  Y  R  H  P  K  H  R  K  K  S  K  V  *  R  E  M  K  P  S  R  T  R  R  P  N  M  R  V  T  R  P  V  V  M  L  C  V  G  V  I  H  V  C  E  Y  A  P  S  V  N  A  A  P  T  I  P  I  K  N  D  T  M  F  *  F  I  F  S  L  F  C  I  L  S  K  Q  L  E  L  F  G  *  I  *  I  K  R  Q  L  I  T  I  Q  L  S  Q  G  P  K  S  T  S  P  W  E  </first_frame>
            <second_frame>  F  K  F  L  F  S  K  F  I  F  :  K  D  K  S  T  K  N  L  Y  S  *  S  M  Y  K  Y  H  N  R  S  A  N  N  K  I  S  Y  G  S  A  T  Y  S  S  V  K  *  F  I  T  D  T  Q  N  I  E  K  K  V  K  S  K  G  R  *  N  L  H  G  R  E  D  Q  T  *  E  *  Q  D  L  L  L  C  F  V  L  E  S  S  M  S  V  N  M  L  Q  A  *  M  Q  L  Q  L  F  R  S  R  T  T  P  C  S  D  S  F  S  L  C  F  V  F  L  A  S  N  *  S  C  L  V  E  Y  K  *  R  D  N  *  *  P  S  S  S  L  K  G  Q  S  Q  L  H  L  G  K </second_frame>
            <third_frame>   L  N  S  F  F  Q  N  L  F  S :   R  I  N  L  P  K  T  F  I  L  K  A  C  I  N  T  T  I  E  V  Q  I  I  K  L  V  M  D  Q  P  H  I  A  L  *  N  D  L  L  Q  T  P  K  T  *  K  K  K  *  S  L  K  G  D  E  T  F  T  D  E  K  T  K  H  E  S  N  K  T  C  C  Y  A  L  C  W  S  H  P  C  L  *  I  C  S  K  R  K  C  S  S  N  Y  S  D  Q  E  R  H  H  V  L  I  H  F  L  F  V  L  Y  S  *  Q  A  I  R  V  V  W  L  N  I  N  K  E  T  T  N  N  H  P  A  L  S  R  A  K  V  N  F  T  L  G   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0054K23.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="19" PGL_strand="-" PGL_start="100198" PGL_stop="99769"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="100198" e_stop="99769"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.994"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.994">
            <gDNA_exon_boundary e_start="100198" e_stop="99769" e_length="430"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100198" stop="99867"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E231191" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100084" stop="99769"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E309753" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100077" stop="99781"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E310793" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="99977" stop="99781"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E307561" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="19" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTTCCCAAGGTGAAGTTGACTTTGGCCCTTGAGAGAGCTGGATGGTTATTAGTTGTCTCTTTATTTATATTCAACCAAACAACTCTAATTGCTTGCTAAGAATACAAAACAAAGAGAAAATGAATCAGAACATGGTGTCGTTCTTGATCGGAATAGTTGGAGCTGCATTTACGCTTGGAGCATATTCACAGACATGGATGACTCCAACACAAAGCATAACAACAGGTCTTGTTACTCTCATGTTTGGTCTTCTCGTCCGTGAAGGTTTCATCTCCCTTTAGACTTTACTTTTTTTTCTATGTTTTGGGTGTCTGTAATAAATCATTTTACAGAGCTATATGTGGCTGATCCATAACTAATTTTATTATTTGCACTTCGATTGTGGTATTTATACATGCTTTAAGAATAAAGGTTTTTGGTAGATTTATCC</gDNA_template>
            <first_frame> F  P  K  V  K  L  T  L  A  L  E  R  A  G  W  L  L  V  V  S  L  F  I  F  N  Q  T  T  L  I  A  C  *  E  Y  K  T  K  R  K  *  I  R  T  W  C  R  S  *  S  E  *  L  E  L  H  L  R  L  E  H  I  H  R  H  G  *  L  Q  H  K  A  *  Q  Q  V  L  L  L  S  C  L  V  F  S  S  V  K  V  S  S  P  F  R  L  Y  F  F  F  Y  V  L  G  V  C  N  K  S  F  Y  R  A  I  C  G  *  S  I  T  N  F  I  I  C  T  S  I  V  V  F  I  H  A  L  R  I  K  V  F  G  R  F  I  </first_frame>
            <second_frame>  F  P  R  *  S  *  L  W  P  L  R  E  L  D  G  Y  *  L  S  L  Y  L  Y  S  T  K  Q  L  *  L  L  A  K  N  T  K  Q  R  E  N  E  S  E  H  G  V  V  L  D  R  N  S  W  S  C  I  Y  A  W  S  I  F  T  D  M  D  D  S  N  T  K  H  N  N  R  S  C  Y  S  H  V  W  S  S  R  P  *  R  F  H  L  P  L  D  F  T  F  F  S  M  F  W  V  S  V  I  N  H  F  T  E  L  Y  V  A  D  P  *  L  I  L  L  F  A  L  R  L  W  Y  L  Y  M  L  *  E  *  R  F  L  V  D  L  S </second_frame>
            <third_frame>   S  Q  G  E  V  D  F  G  P  *  E  S  W  M  V  I  S  C  L  F  I  Y  I  Q  P  N  N  S  N  C  L  L  R  I  Q  N  K  E  K  M  N  Q  N  M  V  S  F  L  I  G  I  V  G  A  A  F  T  L  G  A  Y  S  Q  T  W  M  T  P  T  Q  S  I  T  T  G  L  V  T  L  M  F  G  L  L  V  R  E  G  F  I  S  L  *  T  L  L  F  F  L  C  F  G  C  L  *  *  I  I  L  Q  S  Y  M  W  L  I  H  N  *  F  Y  Y  L  H  F  D  C  G  I  Y  T  C  F  K  N  K  G  F  W  *  I  Y   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0054K23.1" strand="-"/>
                <serials PGL_serial="19" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="100166" stop="99918"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>246</number_coding_nucleotides>
                  <number_encoded_amino_acids>82</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ESWMVISCLFIYIQPNNSNCLLRIQNKEKMNQNMVSFLIGIVGAAFTLGAYSQTWMTPTQSITTGLVTLMFGLLVREGFISL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="20" PGL_strand="-" PGL_start="111898" PGL_stop="111420"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="111898" e_stop="111420"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="111898" e_stop="111420" e_length="479"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="111898" stop="111420"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E231714" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="111898" stop="111513"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E374996" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="20" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TGAAAGAGAAGGACGTGTCGTCTTGGAACATAATTATATTAGGATTAGCTTTCCATGGTCATTCTGAAGAATGTATCTCTCTTTTTGAAGATATGAGGAGAATGAAGTATATCCCTAATGAAATTACTTTTGTTGGTGTATTAGTTGCTTGTAGTCACGCTGGTAAAGTTGATGATGGCCGAGAATATTTCAGCATGATGAGAACTGACTACAATATTGAGACAAACATAAGGCACTATGGTTGTATGGTGGATATGCTAGCGCGTGCAGGACTATTGAATGAAGCGTTTGAGTTCATAAACACGATGGACATTAAACCTAATGCTATTATATGGAGAACACTGCTAGGAGCTTGTAAAGTTCATTCCAATGTCAAGCTGGGAAGGTATGCGAATAAGCAGTTGCTTAAATTGGGAAGGGAAGACAGTGGGGACTATGTCTTGCTGTCTAATATCTATGCATCGAGGGATGAATGGGAT</gDNA_template>
            <first_frame> *  K  R  R  T  C  R  L  G  T  *  L  Y  *  D  *  L  S  M  V  I  L  K  N  V  S  L  F  L  K  I  *  G  E  *  S  I  S  L  M  K  L  L  L  L  V  Y  *  L  L  V  V  T  L  V  K  L  M  M  A  E  N  I  S  A  *  *  E  L  T  T  I  L  R  Q  T  *  G  T  M  V  V  W  W  I  C  *  R  V  Q  D  Y  *  M  K  R  L  S  S  *  T  R  W  T  L  N  L  M  L  L  Y  G  E  H  C  *  E  L  V  K  F  I  P  M  S  S  W  E  G  M  R  I  S  S  C  L  N  W  E  G  K  T  V  G  T  M  S  C  C  L  I  S  M  H  R  G  M  N  G   </first_frame>
            <second_frame>  E  R  E  G  R  V  V  L  E  H  N  Y  I  R  I  S  F  P  W  S  F  *  R  M  Y  L  S  F  *  R  Y  E  E  N  E  V  Y  P  *  *  N  Y  F  C  W  C  I  S  C  L  *  S  R  W  *  S  *  *  W  P  R  I  F  Q  H  D  E  N  *  L  Q  Y  *  D  K  H  K  A  L  W  L  Y  G  G  Y  A  S  A  C  R  T  I  E  *  S  V  *  V  H  K  H  D  G  H  *  T  *  C  Y  Y  M  E  N  T  A  R  S  L  *  S  S  F  Q  C  Q  A  G  K  V  C  E  *  A  V  A  *  I  G  K  G  R  Q  W  G  L  C  L  A  V  *  Y  L  C  I  E  G  *  M  G  </second_frame>
            <third_frame>   K  E  K  D  V  S  S  W  N  I  I  I  L  G  L  A  F  H  G  H  S  E  E  C  I  S  L  F  E  D  M  R  R  M  K  Y  I  P  N  E  I  T  F  V  G  V  L  V  A  C  S  H  A  G  K  V  D  D  G  R  E  Y  F  S  M  M  R  T  D  Y  N  I  E  T  N  I  R  H  Y  G  C  M  V  D  M  L  A  R  A  G  L  L  N  E  A  F  E  F  I  N  T  M  D  I  K  P  N  A  I  I  W  R  T  L  L  G  A  C  K  V  H  S  N  V  K  L  G  R  Y  A  N  K  Q  L  L  K  L  G  R  E  D  S  G  D  Y  V  L  L  S  N  I  Y  A  S  R  D  E  W  D </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0054K23.1" strand="-"/>
                <serials PGL_serial="20" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="111896" stop="111420"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>477</number_coding_nucleotides>
                  <number_encoded_amino_acids>159</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KEKDVSSWNIIILGLAFHGHSEECISLFEDMRRMKYIPNEITFVGVLVACSHAGKVDDGREYFSMMRTDYNIETNIRHYGCMVDMLARAGLLNEAFEFINTMDIKPNAIIWRTLLGACKVHSNVKLGRYANKQLLKLGREDSGDYVLLSNIYASRDEWD</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 260 chains have been computed
$ 
$ memory statistics:
$ 1216664 bytes spliced alignments in total
$ 137 spliced alignments have been stored
$ 8880 bytes was the average size of a spliced alignment
$ 34072 bytes predicted gene locations in total
$ 20 predicted gene locations have been stored
$ 1703 bytes was the average size of a predicted gene location
$ 1 megabytes was the average size of the backtrace matrix
$ 305 backtrace matrices have been allocated
$ 
$ date finished: 2009-12-01 08:46:41
-->
